LOCUS       DARATF010000001        64798 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.001, whole genome shotgun sequence.
ACCESSION   DARATF010000001 DARATF010000000
VERSION     DARATF010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 64798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64798
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.001"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..349
                     /locus_tag="SB502_000001"
     CDS             <1..349
                     /locus_tag="SB502_000001"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HEG0433500.1"
                     /translation="NEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLYKSED
                     KFKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKNVRHC
                     VNSISLEFVKTKD"
     gene            364..990
                     /locus_tag="SB502_000002"
     CDS             364..990
                     /locus_tag="SB502_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEG0433501.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLSSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIAAMGFKMIIIGLKDIFNL"
     gene            1072..2361
                     /gene="cetZ"
                     /locus_tag="SB502_000003"
     CDS             1072..2361
                     /gene="cetZ"
                     /locus_tag="SB502_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HEG0433502.1"
                     /translation="MFGAKKNNTEIIEQLEKKCNGLEDILRSIGNTMAVIEFTTDGVI
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYNDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGYVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSG
                     KYIRYGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLCLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLEDVNQSVELAKEARECMEKIRESSAEVAKAMS"
     gene            complement(2384..3031)
                     /locus_tag="SB502_000004"
     CDS             complement(2384..3031)
                     /locus_tag="SB502_000004"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEG0433503.1"
                     /translation="MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKIAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(3006..5135)
                     /locus_tag="SB502_000005"
     CDS             complement(3006..5135)
                     /locus_tag="SB502_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0433504.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIHDSRSYSSYLLKKHNINLNKIQELQNHENIQNLSNHTSDLTLLAQNGTIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAKKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLIDELGASFALNPKAKKNAN
                     LKDLENVLVKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTELCKSLAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNGKLEFIF"
     gene            complement(5132..5422)
                     /locus_tag="SB502_000006"
     CDS             complement(5132..5422)
                     /locus_tag="SB502_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HEG0433505.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVIDSAKLANFPLQAKVEEE"
     gene            complement(5422..6024)
                     /locus_tag="SB502_000007"
     CDS             complement(5422..6024)
                     /locus_tag="SB502_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0433506.1"
                     /translation="MKKILALILISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFADDYGAYYFLSNGSSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            complement(6035..6487)
                     /gene="smpB"
                     /locus_tag="SB502_000008"
     CDS             complement(6035..6487)
                     /gene="smpB"
                     /locus_tag="SB502_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEG0433507.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGRNLHDKRETLKKKQADLEAKAAMKNYK"
     gene            complement(6484..7251)
                     /locus_tag="SB502_000009"
     CDS             complement(6484..7251)
                     /locus_tag="SB502_000009"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEG0433508.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDLFDELELVDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSKRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLINETLNLKLNLQELINLSMQLGSDIAFFLSGFHSANVSGCGEIIKEF
                     EDDIPNLKWTFPQIFCQTKAVYDEFDREIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDQ"
     gene            complement(7248..7475)
                     /gene="csrA"
                     /locus_tag="SB502_000010"
     CDS             complement(7248..7475)
                     /gene="csrA"
                     /locus_tag="SB502_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HEG0433509.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            complement(7469..8287)
                     /gene="truB"
                     /locus_tag="SB502_000011"
     CDS             complement(7469..8287)
                     /gene="truB"
                     /locus_tag="SB502_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEG0433510.1"
                     /translation="MNKIFAAFKPRGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIQNIKEFDLTNLKQII
                     NQMQGIISYTPPQFSAKRINGTRAYELAKKGIEVNLKPCQMEVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYIDLKPNF
                     IKDLNKLENGAKIFVKELDFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            complement(8284..10359)
                     /locus_tag="SB502_000012"
     CDS             complement(8284..10359)
                     /locus_tag="SB502_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEG0433511.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIKYISYCKNEDKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAILFRVNALSRAIEEAFMKKQISYKLLNGMRFYERLEIKD
                     LISYLRLILNPSDDLSFKRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPKASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVAITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            complement(10356..10793)
                     /locus_tag="SB502_000013"
     CDS             complement(10356..10793)
                     /locus_tag="SB502_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433512.1"
                     /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDF
                     NPELPKELDIKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQIENSILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            complement(10787..12508)
                     /locus_tag="SB502_000014"
     CDS             complement(10787..12508)
                     /locus_tag="SB502_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEG0433513.1"
                     /translation="MLEWDLSALFHDKESLQNFTQDQIQQSLNFKKNYENKLYTLNAN
                     EFLQALKDYENLNQALGKIMTYAYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSREFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEILSKMYDEDRKIRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYNIAKNAFNQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTDKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQRMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            complement(12512..13399)
                     /locus_tag="SB502_000015"
     CDS             complement(12512..13399)
                     /locus_tag="SB502_000015"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEG0433514.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLEGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDVLRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVK
                     NGVAIRMAVLKKLILENEG"
     gene            complement(13409..14632)
                     /gene="sstT"
                     /locus_tag="SB502_000016"
     CDS             complement(13409..14632)
                     /gene="sstT"
                     /locus_tag="SB502_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEG0433515.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFLASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVATMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYSISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            14772..15968
                     /locus_tag="SB502_000017"
     CDS             14772..15968
                     /locus_tag="SB502_000017"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEG0433516.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            complement(16205..17503)
                     /locus_tag="SB502_000018"
     CDS             complement(16205..17503)
                     /locus_tag="SB502_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002930795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEG0433517.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKTSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWFNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELMLKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKEMIKK"
     gene            17476..17748
                     /gene="yajC"
                     /locus_tag="SB502_000019"
     CDS             17476..17748
                     /gene="yajC"
                     /locus_tag="SB502_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEG0433518.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            17741..19321
                     /gene="secD"
                     /locus_tag="SB502_000020"
     CDS             17741..19321
                     /gene="secD"
                     /locus_tag="SB502_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEG0433519.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSEEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVPDSRNPNLKYTLKSIPILDGSMLTDARVGLSDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASAFIVIFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRASIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKSNNTRFWFGYRRR"
     gene            19321..20292
                     /gene="secF"
                     /locus_tag="SB502_000021"
     CDS             19321..20292
                     /gene="secF"
                     /locus_tag="SB502_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEG0433520.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILENQGTFQNLSVTEFGSNEEVIIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            20302..22731
                     /locus_tag="SB502_000022"
     CDS             20302..22731
                     /locus_tag="SB502_000022"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEG0433521.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKVIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYMQKLGKLINSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEVFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            22728..23240
                     /locus_tag="SB502_000023"
     CDS             22728..23240
                     /locus_tag="SB502_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEG0433522.1"
                     /translation="MKKILIFCIGLFLGACGYIPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            23224..24621
                     /locus_tag="SB502_000024"
     CDS             23224..24621
                     /locus_tag="SB502_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433523.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDE
                     LIKQIAAVNEQHNES"
     gene            24587..25771
                     /locus_tag="SB502_000025"
     CDS             24587..25771
                     /locus_tag="SB502_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEG0433524.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSIFERRMSI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPIALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPYFLKHNLKLALKACEILTSQEKTLEALKKLQELNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGMQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            25758..26660
                     /locus_tag="SB502_000026"
     CDS             25758..26660
                     /locus_tag="SB502_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0433525.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYIIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            26597..26992
                     /locus_tag="SB502_000027"
     CDS             26597..26992
                     /locus_tag="SB502_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEG0433526.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            26992..29928
                     /locus_tag="SB502_000028"
     CDS             26992..29928
                     /locus_tag="SB502_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEG0433527.1"
                     /translation="MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDALIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKI
                     DIYTKQFLSLITIKILALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            29930..30691
                     /locus_tag="SB502_000029"
     CDS             29930..30691
                     /locus_tag="SB502_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0433528.1"
                     /translation="MDWNKTYAAIYRARKDYLKPIFEIDPIALKDLVGMESQKKALYE
                     NTLNFIQDKGANHALLWGSKGTGKSSLIKAIFNEFKEQGLRLVELNKEDLFALADIID
                     EIRLENFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     ITDNLDTQITHTELHLSDAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKENFK"
     gene            30688..31374
                     /locus_tag="SB502_000030"
     CDS             30688..31374
                     /locus_tag="SB502_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEG0433529.1"
                     /translation="MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTN
                     WKNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKTKRLKGLVESIINTY
                     ENLENFKTNASREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFEN
                     YEELREFFQSDIESEQENLYKILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEDL"
     gene            31371..32183
                     /gene="thiD"
                     /locus_tag="SB502_000031"
     CDS             31371..32183
                     /gene="thiD"
                     /locus_tag="SB502_000031"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEG0433530.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNVVIDPVMFAKNGHALMPQENCDFFKQTIIKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGAKAVLLKGGHSEANANDVLYNGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            32173..32805
                     /gene="thiE"
                     /locus_tag="SB502_000032"
     CDS             32173..32805
                     /gene="thiE"
                     /locus_tag="SB502_000032"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEG0433531.1"
                     /translation="MKNKLDLSLYLVATKGNKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKSYKIPFLINDRVDIALALDADGVHLGQEDLEAKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGVNYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVA
                     IGGIDKEALVELKGINLSGVAVVRAIMDAKDAFLAAKELKRKIYENLSLK"
     gene            32783..33412
                     /locus_tag="SB502_000033"
     CDS             32783..33412
                     /locus_tag="SB502_000033"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEG0433532.1"
                     /translation="MKIYLLNETPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNA
                     LKALQHAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKMQ
                     KCLYLRAKNIVSTLNLDLKNVGVDLDEMIVYENVFKKGDKKLIYPAIFIFTSPLSVEN
                     FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLDCVKLAKTLV"
     gene            complement(33409..33861)
                     /locus_tag="SB502_000034"
     CDS             complement(33409..33861)
                     /locus_tag="SB502_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433533.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQARQENKECLDNIYFNYTKALIKIKYFYPIAQCVNFKFSNFN
                     PDANLNKDGVIIAHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(33858..34520)
                     /locus_tag="SB502_000035"
     CDS             complement(33858..34520)
                     /locus_tag="SB502_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433534.1"
                     /translation="MSKAFTLFELIISLILFTFITNLLSKPLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISANFTGSFIPLQAQ
                     LVIKLQNEELIYEIKPKFNEQLSQQGLISKNISSFNLQNNKLKICLKRQTKYCLKKRI
                     LL"
     gene            complement(34517..34819)
                     /locus_tag="SB502_000036"
     CDS             complement(34517..34819)
                     /locus_tag="SB502_000036"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEG0433535.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDGIFQFQKLYFQDQNYSVYFKE"
     gene            complement(34816..35547)
                     /locus_tag="SB502_000037"
     CDS             complement(34816..35547)
                     /locus_tag="SB502_000037"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEG0433536.1"
                     /translation="MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVR
                     IIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(35547..35936)
                     /gene="fliW"
                     /locus_tag="SB502_000038"
     CDS             complement(35547..35936)
                     /gene="fliW"
                     /locus_tag="SB502_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HEG0433537.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
     gene            36097..36744
                     /locus_tag="SB502_000039"
     CDS             36097..36744
                     /locus_tag="SB502_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEG0433538.1"
                     /translation="MKKGIFLLVFLSIFFSACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            36761..39136
                     /gene="lon"
                     /locus_tag="SB502_000040"
     CDS             36761..39136
                     /gene="lon"
                     /locus_tag="SB502_000040"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEG0433539.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDLSNMKALDL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDVPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKSNELFIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
     gene            complement(39196..39456)
                     /gene="rpsR"
                     /locus_tag="SB502_000041"
     CDS             complement(39196..39456)
                     /gene="rpsR"
                     /locus_tag="SB502_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEG0433540.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(39467..40015)
                     /locus_tag="SB502_000042"
     CDS             complement(39467..40015)
                     /locus_tag="SB502_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEG0433541.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTANGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGNSNAPQQGGFGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKANPTPQRNQNPQ
                     HEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(40024..40401)
                     /locus_tag="SB502_000043"
     CDS             complement(40024..40401)
                     /locus_tag="SB502_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEG0433542.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNSAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            complement(40488..41354)
                     /locus_tag="SB502_000044"
     CDS             complement(40488..41354)
                     /locus_tag="SB502_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HEG0433543.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNKEKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVDKGLACFKFLPEE
                     QIIFSFDEDFELFLGYNYNVCEEGFWAFSLKFKKYTILQCNFCFTLENNLLLSCIQGH
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQTTLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKINKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLEEI
                     KTNLDKTLSIQD"
     gene            complement(41347..42453)
                     /gene="rseP"
                     /locus_tag="SB502_000045"
     CDS             complement(41347..42453)
                     /gene="rseP"
                     /locus_tag="SB502_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEG0433544.1"
                     /translation="MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIASNSAAQEIGLQ
                     KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE"
     gene            complement(42450..42986)
                     /gene="pgsA"
                     /locus_tag="SB502_000046"
     CDS             complement(42450..42986)
                     /gene="pgsA"
                     /locus_tag="SB502_000046"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEG0433545.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIHHFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(43112..43717)
                     /locus_tag="SB502_000047"
     CDS             complement(43112..43717)
                     /locus_tag="SB502_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0433546.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKKEDLNSILEITRLSPSSLGLE
                     PWKFIVMQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     IQKRLDAYMPFLKSLNQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLNIQKERSSLVVALGYCNDEKNPQKNRFSFDEVVKFI"
     gene            complement(43717..44337)
                     /locus_tag="SB502_000048"
     CDS             complement(43717..44337)
                     /locus_tag="SB502_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0433547.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILEIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     KVDDFLNLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
     gene            complement(44401..44826)
                     /locus_tag="SB502_000049"
     CDS             complement(44401..44826)
                     /locus_tag="SB502_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0433548.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(44838..45926)
                     /locus_tag="SB502_000050"
     CDS             complement(44838..45926)
                     /locus_tag="SB502_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEG0433549.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQNKTDK
                     DLPFLLENLLNQYDFITLFTSSLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     SIKSTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIVSYSNRIKHEWLGISESVLENNGEYSE
                     RCVYFMLKGIFKTANPDFALAVSGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            46025..48778
                     /gene="ileS"
                     /locus_tag="SB502_000051"
     CDS             46025..48778
                     /gene="ileS"
                     /locus_tag="SB502_000051"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEG0433550.1"
                     /translation="MDYKETLLLPSTSFAMRANLAELEPQRFKKWFEQNYAYEKMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDSGCYDETLRAKGLLPSHLLEEFIGLHIFKANEKILELLGEKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDEFFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYNAENLEKVYDILDVWFDSGSTFNAVLNSGLYDTGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLKV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            48772..48882
                     /locus_tag="SB502_000052"
     CDS             48772..48882
                     /locus_tag="SB502_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433551.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            48879..50240
                     /gene="gatA"
                     /locus_tag="SB502_000053"
     CDS             48879..50240
                     /gene="gatA"
                     /locus_tag="SB502_000053"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEG0433552.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKVKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            50250..51707
                     /gene="guaB"
                     /locus_tag="SB502_000054"
     CDS             50250..51707
                     /gene="guaB"
                     /locus_tag="SB502_000054"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEG0433553.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVNALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            51704..51877
                     /gene="xseB"
                     /locus_tag="SB502_000055"
     CDS             51704..51877
                     /gene="xseB"
                     /locus_tag="SB502_000055"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEG0433554.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            51870..52652
                     /locus_tag="SB502_000056"
     CDS             51870..52652
                     /locus_tag="SB502_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEG0433555.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFDKIIKEFKN"
     gene            52773..54071
                     /locus_tag="SB502_000057"
     CDS             52773..54071
                     /locus_tag="SB502_000057"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEG0433556.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLGDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYAEFLDTAKIRVINAEDEFLKNYKNE
                     STKLYPSKDIKNCTMRIENFKPFTSFELKNLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQQYAKLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELIILPVYTAGEEPIGLDLEAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            54064..54414
                     /locus_tag="SB502_000058"
     CDS             54064..54414
                     /locus_tag="SB502_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433557.1"
                     /translation="MSRFFLYFLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            54404..56614
                     /locus_tag="SB502_000059"
     CDS             54404..56614
                     /locus_tag="SB502_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEG0433558.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTIPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     DSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYT
                     KALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSNGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLVKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSRKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLK
                     DIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSTPTSKISPKTSISVAKPTNLSVSLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGAGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            56623..57678
                     /locus_tag="SB502_000060"
     CDS             56623..57678
                     /locus_tag="SB502_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
                     /protein_id="HEG0433559.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEHLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDF
                     SDKLEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYELQYFKQGIFEA
                     NVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDKLVNIFLCKIYD
                     ETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQL
                     KIKTVGGKIKCNHRKIK"
     gene            complement(57730..58431)
                     /locus_tag="SB502_000061"
     CDS             complement(57730..58431)
                     /locus_tag="SB502_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433560.1"
                     /translation="MLYFIIIILIATIGLFVYSGFRIKSKLIKIATNGTLTKQDLKEI
                     EAISKYYEISLMEAAKIHYGKAMITEEMILRLERPYRELYEQCKNFSTNKHEKISHYL
                     SSNNQDNYLEAINFILIAEESVSIALKSKNKDTAESRRKLALEMEQKIQERHPKAYGL
                     IVDTIQLLEDNYDVSLFENQCIKYYEEAGKLKTIKSKQKRIDCINDLIKEAEANPKID
                     RKFVDFWKNKVKEII"
     gene            complement(58431..59105)
                     /locus_tag="SB502_000062"
     CDS             complement(58431..59105)
                     /locus_tag="SB502_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HEG0433561.1"
                     /translation="MHKTADILNRVYALLNITDDKEFCGIFKVKPNTLSTWRTRNTIP
                     YDLLMKISKEHNISLDAIFFDKMRIIDDILKLRYYTDAAAAAGYGAINSQLEYTEIAI
                     SKKFACEALGLPPLAKLDIIKVIGDSMEPFIHSGDVIAIDVSKNKLDLVKNGDIVVIN
                     LDGEIYCKKLLKQPFVNEIVLSSMNSFYKDIVVNIEHINNAEIIGVVCKAISIKTFEN
                     AIIKYE"
     gene            59255..59455
                     /locus_tag="SB502_000063"
     CDS             59255..59455
                     /locus_tag="SB502_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433562.1"
                     /translation="MLKQYFEDNGINIKKFAQKHNLDYLSTIRVIKGEYLGKYKAKKN
                     TRAVYEKLLELKIIDEMPKACS"
     gene            59452..61527
                     /locus_tag="SB502_000064"
     CDS             59452..61527
                     /locus_tag="SB502_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEG0433563.1"
                     /translation="MSYFLETKEAAQTFNVSTGALRLAVSRNSNKYEWLKVDNEKGGR
                     GGKKLLFKISKDELLTAFNQELISKNTLIFNEKMQKVKLSEIITTDNLKTTNNSLKTS
                     NLNLTEPKIDNDLAVLNIKFENLSDEIKNNAREKLKSLKQVEKYIEGGLKQKRALELC
                     GISKIEIFRIRKAYKENGILGLIDTRGLHRKDKTKLSAWMQEYALREYRTFGAGGFNF
                     TELWWQIHKEAAIKENYDFIGFDLGKVKPLFSVKTLQNFIKNYYKDKPLEHCIITQGL
                     DKAKSKFLPAQGNQRELYDMKNMCWQIDSSPADFIVRDDETLEPFRPHILSVVDVFSG
                     MGVATLVGKSNSLSLTRLLWKAIDKFGKPDMIKGDNGKDYLSKDFQSLLDSLNISYDA
                     AIAYAGEQKALVERRFGTLQRARLSQMHGHIGNSLAKREMIEQKTPKKERKAKDEYGF
                     AKKTNQKLLHTFSEACELLEAEVIKWNMSKVRRKKGVKTPLELWNSCDRAIVKISYEE
                     FLFNAGNKELRVVGKKGINFESRVYKSALMPSVGTRVKCVQNIDNIKELFIYDLSGNF
                     LCLALDESIAKLSKESYKMLKKGYESEVKAIKEVLKKDEIAAFTKLNIKQDLQDLQSA
                     FENSLVEAKEVHQKSLAKETLKTQRELEEIKNNANADELILNAKKEINNDESEFDMEA
                     FVEKKYFAG"
     gene            61598..62521
                     /locus_tag="SB502_000065"
     CDS             61598..62521
                     /locus_tag="SB502_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0433564.1"
                     /translation="MQLVELTKKFLSTQNISQNNLSDRLGINKSYMVGYMKEGSSYKY
                     ASKVEPLLEKYIKSFVEEKSVKELQTPFIATKDAKAINVTIESAMSNREMGVIIGEAG
                     TGKSRAIKEYAAKNGTRVVLFEATTETSKRMLLVGLENKLNVCFKGSLDDKIRGIASE
                     LARTSKVLIIDESEHLPFRALECLRRIYDFSNTALILVGTRKLKNNLTGIGRNDYNEY
                     GQLSSRIGAKWELKGLCYQNKEGLKDEDLKTLCNHFDVEEKKAIDLVFNLARGNFRKS
                     EKLLKRACEFADGKAVELKHIEAAASFLMLG"
     gene            62524..62715
                     /locus_tag="SB502_000066"
     CDS             62524..62715
                     /locus_tag="SB502_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-70"
                     /protein_id="HEG0433565.1"
                     /translation="MSFEEIAKELNLSVTRVHQIYTEALRKLKSPKNKDKWMAIFETI
                     DLIKKEKAKKENLIQGEKK"
     gene            62712..62897
                     /locus_tag="SB502_000067"
     CDS             62712..62897
                     /locus_tag="SB502_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433566.1"
                     /translation="MIPMIKGEKADYSASLFEIKGVSIIYKESGVFVDVLKGIYPDYI
                     AKKIIRFHLGKKLNKSA"
     gene            62954..63295
                     /locus_tag="SB502_000068"
     CDS             62954..63295
                     /locus_tag="SB502_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433567.1"
                     /translation="MALVYVASPYKALVVRESQRKAQAISIAQQECLKIMRECEGFVP
                     VSPILQFSYLDENKHRDKALQMGLELLKACDYIYLSKHKDAKYSQGMQEELALAKKLG
                     IKELVLELPLQ"
     gene            63402..63887
                     /locus_tag="SB502_000069"
     CDS             63402..63887
                     /locus_tag="SB502_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002806832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEG0433568.1"
                     /translation="MQINNLEDVNLALKKVAELSVKIEKINGEVTLACNEIKEARAGE
                     IKVLSDELKYIEQCITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLEN
                     LIKALKSYGLNDCITYKEELNKDAIAELEDSALVKLGLKRVVKDNFRIEPKIESLEIE
                     K"
     gene            63884..64063
                     /locus_tag="SB502_000070"
     CDS             63884..64063
                     /locus_tag="SB502_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433569.1"
                     /translation="MRELSLATFKLLNSVFKTKTAHFNGFLELDFKNKPKLKKQSFKR
                     KKKMTSKQKIRLKRI"
     gene            64127..64399
                     /locus_tag="SB502_000071"
     CDS             64127..64399
                     /locus_tag="SB502_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433570.1"
                     /translation="MYVNVSIDASDLEDIDAHDLAELFEDLSTKEQEEFFGIIHKDIK
                     PLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK"
     gene            64396..64782
                     /locus_tag="SB502_000072"
     CDS             64396..64782
                     /locus_tag="SB502_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433571.1"
                     /translation="MKLQDFDFRVWDKHHKGCGNKDCKCQTKYVYGEEAKTRLSEFKE
                     DCEIELFTGLYDKKGKKVYENDIVKVKSLYDYFLAKISIHKEGTFYFEGKNGDYIGSL
                     IYLVEDEGYTIETIGNIHENPELLKC"
BASE COUNT        23022 a         8479 c        11028 g        22269 t
ORIGIN      
        1 aaatgaagaa gaaaaaaaag taattttaaa taaaggaaca gaagctcctt ttagtgggaa
       61 atataatgat ttttatgaaa aaggaatcta tcaatgcaag caatgtggag cttcgcttta
      121 taaatccgaa gataaattta aatcaggttg tggatggcct agctttgatg atgaaataaa
      181 aggggctgtt aaaagaattc ctgataaaga tgggattaga accgagattg tatgtgcaaa
      241 ttgcaatgga catttaggtc atgtttttga aggagaagga ttttctgcta aaaatgtaag
      301 acattgtgta aattctattt ctttggaatt tgtaaaaact aaggattgat agtgttttct
      361 agtatgggtt ctgagcttta tttgatgttt tttgctgcaa ttactttact tgctatatta
      421 aatccttttg gtaatttaac tcaatttttg gctatgagtg atggattgcc tttaatgctt
      481 cgaaaaaaac tttttagaac tattctctat acagctttta ctatagtttt ggtgttttta
      541 tcatcaggac ctttatttat gaactatatt tttagagttt cattggatga tttaagggtt
      601 tctggtggtt tggttcttat tataatggct attaaaaatt tacttttttc aacaaaaatt
      661 gcaactaagg attttagttc ttatcaagat atggatgata aggaaatttt aagacagagt
      721 ttaataccta tggcatttcc tatgcttgtt gggcctggaa ctttagctag cgttattgtt
      781 atagccgaag atggtgggct tgatgttgct cttggtgggg tgatgatagc ttttattttt
      841 atgtttatac tttttcattt tgcagctact atagaaaaaa tagttggaaa actgatttta
      901 catgtttttt ctcgtatagc acaagtattt attgctgcta tggggtttaa gatgattatt
      961 ataggtttaa aggatatatt taacttataa attaatataa ttttaagtaa ataatactat
     1021 ataaactatg atataatttt aaaataattt attattaaaa aggtgagttt tatgtttggt
     1081 gctaagaaaa ataatactga aataattgaa caacttgaaa aaaagtgtaa tggtttagaa
     1141 gatattttaa gatctattgg gaatactatg gcggtaattg aatttaccac cgatggcgtt
     1201 attttagagg caaatcaaaa ttttttaaca actatgaaat actccctttc agagatcaag
     1261 ggtaagcatc atagtatgtt ttgtttgcct gaagttgtta attcttcagc atataatgat
     1321 ttttggaaag atttaagaga tggaaaagct agaagtggtc tttttagacg tatagctaag
     1381 ggagggatag atgtttattt agaagcaaat tatcttccaa ttagtgataa taatggttat
     1441 gtttataaaa ttattaaatt tgccaatgat ataactcaaa gacattatga aatgcttgat
     1501 cttagaaata ctattgctgc tgctaatcgt tctatggcta ttattgaatt taaacctgat
     1561 gggactatta ttacggctaa tgaaaatttt ttaagaacta tggattttaa tattgatgag
     1621 attaaaggaa agcatcatag catgttctgt gattctaatt atagacactc taaggactat
     1681 gttcaatttt gggaagattt aagagagggc aaatttcaat caggtaaata tataagatac
     1741 ggaagaaata ataaaaaagt ataccttgaa gcaagttata atccggttaa aaatgatgat
     1801 ggaaaaattt acaaggttat taaatttgct acagatataa gcgaacaagt taaaaaagat
     1861 caagaaaaac tttgcctcat aagcgaactt gcagaaaaaa atgataatct tactcaagat
     1921 ggagatcgtg taattgaaaa cactgtttca aatgttcaga atattgctga tatgatgtct
     1981 caaagttcaa atcttgtttc ctcattaaat caacaatcag atgaaattaa atctattatt
     2041 cagactatta gtgatatcgc tgatcaaact aatctgcttg ctttaaatgc tgctattgag
     2101 gcagcacgtg ctggtgaaca tggtagaggc tttgctgttg ttgctgatga agtaagaaat
     2161 ttagctgaaa gaacagggca ttcggttaat gaaattacca ctacgattaa ttctattcgt
     2221 aatgttacat cacaagtggt tgagagtatt aaaagcggtt tagaggatgt taatcagagt
     2281 gttgaacttg caaaagaagc aagagagtgt atggagaaaa ttcgtgaaag ctctgctgaa
     2341 gttgctaaag cgatgtcata agcgtgattt tcacgcttat tttttaagta attaaatctt
     2401 taaaattttt aaaaccactt tcttggttgc atttttcttt taaaatattt aaaaattctt
     2461 tcctagaaat attatgagcg cccataaatt ctaaatgttg gttataaact tgacaatcta
     2521 tgataaaatc ataaggtttt aataaatcac aaagtttaat catagcaatt ttagatgcat
     2581 tttttttaat gcttaccatg ctttcaccaa agaaaacctt gcctaaaatt aaaccataaa
     2641 ttccacctat aagttcatta ttttcataaa gttcaaggct atgtgcatag ccttgggtaa
     2701 ataacttata ataagtggta ataaattcat catctatcca gctttgagag cgtgtatcgc
     2761 gacataatgt aattaatttt aaaaaatcat aatcaagttt aatttgatag agattaataa
     2821 attttttcat atttttttgg atgtgaattt gatttggaat taaaatgcat ctaggatctg
     2881 gacaccacca agttacaggt ttacttgtcc atgggaatag accaaaagta taagctttta
     2941 caataaaatc agcttctaaa ttttgactta aaaatacagg agcattttta ggtgcattga
     3001 gtaatttaga atataaattc gagctttcca tttttaccaa gtttgatttt agctataccg
     3061 ccttttttaa gctttccgaa taaaatttca tcactgattt tttctcctat ctcctcagaa
     3121 attatgcgtt ttaaaagcct tactccaaat tctttattat aggctttttt agctaaataa
     3181 attttagctt tatcatccac tgataacttt atattattta aatttttaga aatttcatca
     3241 agttcttttt cgataatttt aacaagtata gcatcgttta aatcattaaa atgtaaaatt
     3301 ttatcaatac gattaataaa ttctggagca aaaaagtctt tgatagcacg attacttttt
     3361 tcttcatttt tacttaaaaa accaagctca ttgctttctt taagtcctag attagatgtc
     3421 ataataatga ttgtattttt aaaatctact ttaagaccgc tattgtcggt gagttcagca
     3481 ttgtcaaaaa tctgtaaaaa ggtattgctt aaatcaggat gagccttttc tatttcgtca
     3541 aaaagaacaa gactgaaagg atttttgcga atagcattgc ttaaaagtcc accctcttca
     3601 aaacctatat atccagctgg agatcctatt agtttactta tagcatgttt ttctgcatat
     3661 tcactcatat caaagcgttc taaatttaaa cctaaaaatt cagctaaaga tttgcaaagt
     3721 tctgtttttc caactccact tgatccagta aacaaaaaca ctccgcgtgg tgtattggaa
     3781 tttttaaatc ctgcgaaact ttgcttaagt gatgaaacaa ggctatctat aacttcatct
     3841 tggccaaaaa tttttgcttt taaatttgtt tttaaattca ttaaagcttt gttttgatcg
     3901 aattcaaaca ttttatgatg gtgggtcatt tttactaaaa cattttctaa atcttttaaa
     3961 ttggcatttt ttttagcttt tggatttaaa gcaaaagaag ccccaagttc atcgatcaga
     4021 tctatagcac aatcaggtaa aaatttatca ttaaaaaatt ttttacccca aattacagca
     4081 tattgaagaa tttcatcgtt taattttata tgatgaaatt cttcatattt gttttttaat
     4141 cctttcagaa tttgcaagct ttcttcttgg cttggttcat ctacatttat tttagcaaaa
     4201 cggcgactta ggggtttatt tttatcaaaa gtatttttat attccataaa agttgttgca
     4261 cctatgcatt ttaaagttcc attacttaga gctggtttta aaagattgga aaaatcagta
     4321 tgagattctc ctgtacttcc agctcctact atagtgtgaa tttcatcaat aaataaaata
     4381 gcattaggta ttttctcaag ttcatttaaa atttctttaa ttcttttctc aaaatctcca
     4441 cggtattttg ttcccgcaag tatactagcc atatcaaggc taaaaatttt tgcattttgt
     4501 aagtttttag gcaccttttt tttcgcaata gccaatgcta atccttctac aatggccgtt
     4561 ttgccaactc ctgcttctcc tactaaaata ggattatttt tcttgcgacg tgaaagaatt
     4621 tgcatcattc tttcaagttc aaattttctt cctattaaag gatcaatcgt gccattttga
     4681 gctaaaagtg ttaaatcact tgtgtggttg cttaaatttt gtatattttc atgattttga
     4741 agttcttgaa ttttgttaag atttatgttg tgttttttta agagatagct agaataactt
     4801 cttgaatcgt gtatgagctt ttctaaaaaa tctataattt taatttcatt atttttattt
     4861 ttagatgaaa gtaagatttc atctaaaaca acagatattg taggttctat ttcttgttta
     4921 ataacttgat tgttttgaga aatgtaattt tttaattcag tttctagaag ttcaagatct
     4981 ccatctgaaa attcttcaaa tatatcctta aaatcagtgc ttagttttag taatgcaaac
     5041 agtacatgct cacaggtaac aaattcatgg tggtttatta agcttagatt tttggcatta
     5101 tcaagatatt tttgtaaatt ttcttggtat ttcattcttc ttctaccttt gcttgtagcg
     5161 gaaaattggc aagtttagcc gaatctataa cttttttttg ttttgaaaga gctatttcct
     5221 gggtgtaaat gccacaaatt ccagaaccat tgtggtgaat ttctaacatt gtttgacttg
     5281 ctttctcaag gttttgatga aaaatattca tcaaaatttc tataacaaaa tccatggttg
     5341 ttacatcatc atttaagagt ataactttat acatttttgg ttcactaagt tttgtttgct
     5401 ctagagtttg ggtttttggc attattttcc tttgtagatt ttatttaaat cttcttgcat
     5461 gagttctgtt ggaattttac caagataaaa atttgttgga gtattattat tccagtaatc
     5521 gcttattttt tgataaattc cattttttaa aacaacttta aaaggaagtt gctccatatt
     5581 ttgatagtct atatctttta aaatttgagc aataatacga tcattagagc tgccattgct
     5641 tagaaaatag taagcaccat aatcatccgc gaatttttta actgtttcat cgctaacatc
     5701 ttcaaaatgt gtaagtccta taatgataaa tttgctagaa ttatttttcc aaagtttgct
     5761 aagatctaaa gcttcttctt tacatggggt gcaaaaagtg ccaaaaaaat caaacattag
     5821 aacttttcct tcctctcctt ctaccacaaa acctttatct gttcttatta aagttttgct
     5881 tccaccattt acactattta agactatttt atctcctttg tgatactctt caaacataaa
     5941 atcattttga atttcttctt ccttggagca agcattaaga aaaaatgcta aacttattaa
     6001 aattagggct aaaatttttt tcatttattt tcctttattt gtaatttttc atagcagctt
     6061 tagcttctaa atcggcttgc tttttcttta aagtttcacg cttgtcgtgc aaatttctcc
     6121 ctttagctaa agcaagggta gcttttactt tattttttgt gttaaaataa agatctaatg
     6181 caacgatagt atatccttct atacttactt tacctaataa tttatcaatt tgctttctat
     6241 gcattaaaag ctttctagca cctctttctt cgtgtttata gaaagaatgt gtagtatgaa
     6301 gcaatgaaat atgagaatta agtaaaaaaa tctcattttt tataatgcga acaaaagagt
     6361 ctttaagatt tgctcttcct gctcttaagg ctacaacttc acttccttta aggacaattc
     6421 cggcttcaaa gcgttctatg atgctataat caaataaagc ttttttattt ctcgcaataa
     6481 ttttcattga tcaaccttaa aaacactact accgctaccg cttagaaaaa aatcttcttg
     6541 caagtaagac ttcattttag gatataaagt tgcacaagga gtaaataaat catttaattc
     6601 tttgttttta aagttttgta acaactcttt tgtgctgagt tttttgtaga tttgcgcttg
     6661 attattgttt ttttgaaagt caaatatttc tctatcaaat tcatcataaa cagctttagt
     6721 ttggcaaaat atttgtggaa aagtccattt taaattaggt atgtcatctt caaattcttt
     6781 tataatttca ccacagccac ttacattagc agagtgaaag ccacttaaaa aaaaagcaat
     6841 atcacttcct agttgcatgc ttaaatttat aagttcttgt aggtttaatt ttaaatttag
     6901 ggtttcattt attagcagta aaaaactcgc acaatcgcta cttccaccgc caagtccagc
     6961 acatactggg atattttttg tgagttttag gctttttttg ctaaataatt cttttaattc
     7021 gttattatat cttttagaaa gtagcaaata agccttttga ataatattat tttcgcattt
     7081 aaaattacta atgatttcaa attctttttt agagtctgat tctttatcaa caagctcaag
     7141 ctcatcaaaa agatctttta aaagtataaa tcgtgattct aaaagatgat attttcttga
     7201 gtcaaaaccg gtaagtttta aaaaaatatt tgctttagcg taagctttca tttgattagt
     7261 tttttgctta agtcatcaag tttaatatca ttctgaacaa cagaatgtaa attttcatcc
     7321 tttacttgtt gaacaagttc ttttctaagt atcataaggg attttggagc ttctatgcct
     7381 attttggcat atcctttccc tgtttgaacg actttgattt ctataccttc tccgataatt
     7441 atactttcat tttcttttct tgataatatt aacatttttc aaccttattt agaagatatt
     7501 ttactgtatt ttctttaata ttaattatgc taaaatattt ctctgtttca atataataat
     7561 ctccttcatc atgaaaatct aattctttga caaaaatttt agcaccattt tctagtttat
     7621 ttaaatcctt gataaaattt ggttttaggt caatgtattt taacacattt aagcttttct
     7681 cattattata aacaaattta ccttctttaa tgcgctctaa agagcttaaa gtcgcattaa
     7741 tacctagttt tctagcaaaa agttcacaat aagatcttat ataagcacct tcactgactg
     7801 tgatttcgat atttaaaaaa ggatgattat agcttaaaat cttgcaatca aatacttcca
     7861 tttgacaagg ttttaaattt acttctatac ctttttttgc aagttcatag gcgcgagttc
     7921 cattgattct tttggcgcta aattgcggtg gtgtatagga gataattcct tgcatttgat
     7981 taatgatttg ttttaaattt gtaagatcaa attcttttat attttgaatt tcttttatat
     8041 tttgatcatc aagacttaaa gagtaaactc caagccataa agtagcttta taggtttttg
     8101 gagttttttt taaaaaacgg aaaagttttg tgtattgtcc aaatgcaacg attaaaaccc
     8161 ctttggcgaa aggatcaaga gtgccagaat atcctgcttt tttattttta tattttttct
     8221 ttaaagtgct taaaaaggca ttagagctca aaccccttgg tttaaaggct gcaaagatct
     8281 tgttcatact gctttttcca caaagcttgc catgattaca cgcattatgc caccaaaatt
     8341 aatattaagc ttttcctctt ttccgctttt attaacttca acaaccctgc caatgccaaa
     8401 aattttatgt ttaactagat ctcctttgca aaaactagtt ttttgtatat tttgattttt
     8461 tgatttttca ttgattaatt tactttcttc taagaagcgg ctaggattga tgtttgctct
     8521 tgaaccatga taaaaacgag aatttgcaac acttattgtg agaaatttct tggcgcgagt
     8581 gatggcaaca taagcaagac ggcgttcttc ttcgagattt tcttcgctat ttaaaggaaa
     8641 aaatccttca tcaaagccta ttataaaaac ataatcaaat tccaaacctt tgctagcatg
     8701 aatactcatc aagcaaacac attcttcatc taaattatct tgatcgctta ataaagaaat
     8761 ttcactaagt agatcttcta aagaagcttt gggatcttct ttgagttttt ctcttagatt
     8821 agcataaaac tcatcaagat ttctgattct ttcatctcca tcatcttgct ctgaaaaata
     8881 atctttaatt ttaaataatt cttctatatt gtcaaaaacc ttttttgcat tatcgtagct
     8941 ttttagagtg tgaatatttt gtataaaaat atttgcttca ttttgtgctt tttttgttgt
     9001 taaaattcct acaccaccat cgctttcgca tagggcatca aaaagtgaaa tttgacgttt
     9061 ttttgcatat tcttctaaat tttttagggc tttttctcct atggatcttt tggggcgatt
     9121 aataatacgt ttaaacgaca aatcatcgct tggatttaag ataagtctaa gatacgagat
     9181 taaatctttt atttctaatc tctcataaaa acgcatacca ttaagtagtt tataagaaat
     9241 ttgtttcttc ataaatgctt cttctattgc tcttgatagt gcattaactc gaaataaaat
     9301 ggcgatctct ttagcttcta ctccagaatt tagcaatttt ttcacttctt gagcaatata
     9361 taaaccttca tctttttcgt tttcgttttt taatatttta atattttccc cagtatcttt
     9421 agtgcagatt aaagtttttc caagtcgttg ctcattgtga gatatgagat tatttgctgc
     9481 ttgtaaaata gtccctactg aacgatagtt ttgttcaagt tttacaagtt taacattttt
     9541 aaaatcgttt tgaaaattta aaatattttc aatttttgct ccacgccaac tataaatact
     9601 ttgatcatca tcaccaacaa ctgtgatatt ttcatgcata caacatagat tttttagaat
     9661 tttatattgc aaggtattgg tatcttgata ctcatcaact gtaatgtaat tataaagtaa
     9721 gctttgttct ttggcaaaat ttatatcatt ttctaaaatg agattgctta gcaataaaag
     9781 atcatcaaaa tctacaaaat tttgttttaa taagtattct tcataagcac ggtaatagtt
     9841 ggcaaatttg tattcatttt gatatttttc aaaattatgt tcttttagta aatttaaatc
     9901 ttcaaagaca ttgcttactc ttttgtcttc atttttgcaa taagatatgt atttgataat
     9961 atcatagaca ttatctttgt ttttatcatg gattaagtct ttaattattt tttttgtatc
    10021 atctgtatcg ataacaataa aactattttt acgctccaat ctttcaaaat ggagttttaa
    10081 aaataaaagt ccaaatttat gaaaggtaca aagcaaagga ttgtgattgc cttgcagaaa
    10141 atttaatgct ctatgacgca taacactagc tgctttattt gtaaaagtaa gagtaagagt
    10201 gttatgcgag gggatgccta cttcaccgat aagataagca agacgagtgg taatagtttt
    10261 ggtttttcca ctacctgcac ccgctaggat aagcatagct ccatcaatgt gacttaccgc
    10321 ttgtttttga ctatcattta aatcttcaaa tagattcatt ttttgaaaat atctttattt
    10381 tttggattat ttaaaaatat atttttagat ttttgtaaat ttttactatc ttcgcgttta
    10441 taaaggctaa aattaacaaa taaaatgcta ttttctattt gaatttgcgt gatagctcct
    10501 aaatcaacct ttacaaaact atcaaaatca tcatttccaa aacctgcgtg aaattgaatg
    10561 aaatctttat ttagttgtat ggattcaaag gtgtatcctc caagagcaaa aagagcataa
    10621 ggattttgtt taatatcaag ctctttggga agttcagggt taaaatctat gaaatttgta
    10681 tttgcaacta tggaaaattc tatattttct tctataaggt gtgaaataac ttcataacaa
    10741 tgcttttgca tggtatggat aaaattttca ttttttaaga ttgtttctag catgattgta
    10801 actccatgaa ttcattgatg agtttttgaa tttcttttat gcctatttcc caaaaatttt
    10861 catcttctat atcaaatcca aacattccta ctagttcttt tggactcacg cttccaccta
    10921 aagaaagcat tttgatataa agttctttaa aattttcaca ttttttactt ttgtaaagtc
    10981 cataaagagc taaaactaaa agttgtgcat aggcataagc atagcagtaa aaaggagaat
    11041 ggataaaatg aggaatataa ctccaccaag aagcataatt ttttgtaagt tttacgctgt
    11101 cttgaaacat cctttgagat tcttccatcc aaattttatt gatttcttcg gtgctaagtt
    11161 cattttcttg agcatgtaag cgtctttcaa aacaagtaaa attaatttgt ctataaaaag
    11221 ttgcaaaaat atcttcgatt ttatttgcat ataaagatag gagttcttct ttttttaact
    11281 tatctttaat aaaatcaaat acgagcattt cagcaaaaac tgaagctgtt tctgcggtgg
    11341 ttaaaggcgt gttttgattt aaatagctta cattataaga aagtttttga tggatggtgt
    11401 gtcctaattc atgtgcaagt gtaaaaagat cacgcctttt atcggtgtag tttaataaaa
    11461 caaaaggatg tgcatcagaa gttgcagaat gtgaaaaagc acccccttgt ttattttctt
    11521 gtggataaac atcaatccag ccttgattaa aagcattttt tgctatatta taaaattgcg
    11581 gagaaaaagc ttgaaatgcc tctaaaacaa tatttttact tgttttaaaa tcaaaacttg
    11641 cttcttttcc tatgggtgca tatctatcat agtctttaag ctcatcatag cctaaaattt
    11701 gtttttttct tttgtaaaat tgcgatacta agttaaaatg tttttgcgca cttgctatca
    11761 aagaatcaac gcttttttgt gaaatttgat tgctgatatg tcttgaaatt tcagcatttt
    11821 cataacctct taataagctt atattttttc tttctgtttt tatcatattg ataataaaac
    11881 ttaaaagtct gctatttttt tgcaaaactt tactgaattt tttagcagct tttttgcgta
    11941 tctttctatc ttcatcatac attttgctta gaatttcttc ttcgctaagt tttttacctt
    12001 caaaagggat ttttaaagca ctcatacttt catcaaaaag tctactaaaa gcatttgcac
    12061 ctgtatttga aagataaagc ataatgcgtt cttcgttttt gctaagatta tagcgtttgt
    12121 tttgcaataa attagaaaga taaaaatcat aatctttgca aaaagttgta aattctcgac
    12181 ttttctcagg agctaactcg caaaattcaa gctcgaaaaa gagtaaattt tcttctattt
    12241 ttttgcattc ttcttcgtat tgtgcgtaaa aagaaccatt ttgagtgttt ttagcaaaaa
    12301 gcaaataagc ataagtcatg attttaccaa gagcttgatt taaattttca taatctttta
    12361 aagcttgcaa aaactcatta gcatttaatg tataaagttt attttcatag ttttttttga
    12421 aatttaaact ttgttggatt tgatcttgtg taaaattttg caatgattct ttatcgtgaa
    12481 ataaagcact taaatcccat tctaacattt tttatccttc attttctagt atgagttttt
    12541 taagaacagc cattctaata gccactccat ttttaacttg ttttaaaact aaagtccttt
    12601 catcgctcat catttcatcg cttatgtcaa tattgcgatt aacagggcct ggatgtagta
    12661 aaataagctt tttatccttt actaagcttt tttgaatgca aaaatcattt gcatagtctt
    12721 taagtgaagc ataaacggtt ttattatgtc tttctgtttg tgttctaaga ctcatgataa
    12781 tatctgaatt tgctatgata ttctcatcaa gcttataatg ttttttaaga tgggtattag
    12841 gcataaaatg tggtggagct actagggtaa tatcaagatt aaacctgctt aaaagttcta
    12901 tattggacgc tgcaacgcgg gaatttttaa tatcacctac gatgcaaatt tttttacctt
    12961 cgacatcgcc ttgaaaatga ttataaatag taaataaatc tagcaaagct tgggtaggat
    13021 gggcgtgttt tccatctcct ccattaacaa ctggacaatg catatgcttt gctaatatca
    13081 aaggaactcc tgagtttgcg tgtcttacaa caatagcatt aggactcatg gcatctaaat
    13141 tagcagcagt atcataaaga gtttctcctt tgctagagct tgatcttaaa acatcaaggc
    13201 gtaaaaccct agcacctaat cttcttgcag cgctttcaaa agatgaaagg gtgcgtgtag
    13261 agttttcaaa aaaaattgtc gtgatacttt ttccttcaag aaaagttcta ggtttttcat
    13321 ctaagaaatc acttgcttct ttaaaaagct ccataatttc gactttatta aaatcctttg
    13381 tagtgatgag atgacgcatg tttttacctt atttgatatt gtaatttaat tcatttttag
    13441 aacaaattgc tgtaaaaaga acatctgtag aactatttaa agcagtttca acactatctt
    13501 gaataacccc tataataaaa cctatggcaa ctaccttcat agcaatatca tagtctatat
    13561 taaataaaga acaagccaaa ggtataagca gtaaagatcc gcccgcaact ccgctagccc
    13621 cacaagctgc aaaagtggca ataatgctta ataaaaaggc ttgtaaaaga ctgatttcta
    13681 taccaacggt attggctgca gtaagactta aaatagctat agtaactgct gctcctgcca
    13741 tgttgatagt agctcctaaa ggtatagaaa tgctataaaa ttctttatct atgccaagtt
    13801 tagcgcaaag tgccatattt acaggaatat ttgccgctga acttcttgta aaaaaggcaa
    13861 aaaatgcact gtgccttaag cagataaaaa ttaaaggaaa aggatttttt cttgtataaa
    13921 aaaagactat taaggcattg ataacaaaag taacaaaaag catagtagct acaagtaaaa
    13981 ttaaaagttt tacataactt agcaaacctt gtgctcctgt ttgtgctaca gaattagcca
    14041 caagtccaaa aattccaaaa ggggcaagtt ttactacaaa tttaacgatt tttaaaaccc
    14101 cttcattgat atctataaaa acttgttttg cttcgttaga acagtgtttt aatgctatac
    14161 ctccagctat tgcccaagtt aaaattccta aataatttcc gcttgaaaga gcatttatgg
    14221 gattatcgac aattttaaat aaaagatctt tgaaaatatc actcatgtgg gttggagatg
    14281 agtttgtagc agtttgaact ccatctaaaa caagctttac gggaaagaaa aaattagcaa
    14341 gaaccgcaca agctgaagca agaaaggtgc ctactatata taaaataata atatttttga
    14401 tcttagcacc actttgagaa aaatctttag tgcaaattga ggttaaaatt aaaataaaaa
    14461 caagcatagg agcgatagct tttaaggcac ttgtaaaaag tattccaagt aaatttgcaa
    14521 tttcagatat ttctttagaa ctaatgccta taagtattcc tagtgctata cctatacaaa
    14581 tttgaactat gaggttgcct ttagcgtagc tttgaatgat tttagaaaac ataaaaacct
    14641 tttaaatatt ttttatatca gaagttgatt ttaactaact tttgcttaat tttagagaat
    14701 ttttaattta tcaagctttg ataagtttat ttggatacaa ttgtggttca ttttaaatga
    14761 aaggactttt tatgtatcta ttcacttcag aagtcgtaag tgcaggtcat ccagacaagt
    14821 gtgctgatat aatcgctgat acgatagtgg atatactctt gaaaaatgac aaaaattcaa
    14881 gggtggcgag cgaggttttt gtcgcaggaa ataaggttgt gataggaggc gaagttaagt
    14941 caaatcacaa acttagtaaa gctgattacg ataatttagt taaagatgtt ttaaaaaaca
    15001 ttggttatga cggagcaggg cattttagca aagagcagtg tttgcatcct gatgaagttg
    15061 atgttatggt gtttttaaat gaacaaagcc ctgatatcaa tcaaggtgtc gatcaagaag
    15121 atggcgaaac aggagcaggt gatcaaggta ttatgtttgg ttttgcaagt tgcgaagctg
    15181 aagaatacat gccagcagct attagttatg caagaatgct atgcgataga gtttatgctt
    15241 atgcaaaagc aaatccacat gaacttggag tggatattaa aactcaagta actattgatt
    15301 atggcactaa ggcgaatttt gaaaattgca aaccgcaaag tatccatact atagtagttt
    15361 ctgcaccttg tgttgaaagt atgaaaatag aagatttaag atctttagtg atgaaactta
    15421 tcttagatag taatttacca aaagaacttt ttgatcctaa taaaactaga attttaatca
    15481 atccaactgg taaatatgtc aatcactctt ctttacatga tagtggttta acaggaagaa
    15541 aacttatagt agatagtttt ggaggttatt ctccaatagg tggtggtgcg caatcgagca
    15601 aagattatac taaagttgat agaagtggac tttatgcagg tagatggtta gctaaaaaca
    15661 tagttgcagc agggcttgct aaaaaatgta tagttcaact tagttatgct ataggtgttg
    15721 caaaacctac ttcggtaagc gtggattgta tgggcacaaa taccagtgta aatgacgatg
    15781 ttttaagtga ttttgtaatg caaaatttct ctttaacgcc aaattggatc cgtgataaat
    15841 ttcatctgga taaaccaagt aaagaaactt ttctttatgc ggatgtagca gctcgtgggc
    15901 aagtaggaca aaaggactat ccttgggaaa aacttgatgc tctagaacag tttaaaaagc
    15961 tactttaaaa aattaacaat attatacaag cttaaacaag gcttgtataa ttataaagaa
    16021 ttaataaagt tatattaatt tttgacttag agggatattt ttcaatatcc ctcataaata
    16081 taaaagttag gaaggaagct aaattaattt agctttgggg taaaaacccc tctaagtcaa
    16141 aatattgttt gacagaatta taatataaaa taacttaaat tactttaaaa ttaaaatttt
    16201 aatattattt ttttatcatt tctttgctta aaagcttttt agggagtata actatattct
    16261 ctttgccatt tgtagcatga taaacactaa ccccatattt acttgcataa aatttcatta
    16321 agagttgctg gagtttgtat tcgctactat tattaaacca agcattgttg cttagggcta
    16381 taataatttg tgaattttga tagttttgtt ctttggtagc ttcataacaa attgcatttg
    16441 tgataatttg attatctaat ttatatttgc tttgtatagg acctttggaa aattcttcaa
    16501 tatttttgag aaaatatttt tttgttaagt ctttaaaaaa tggaatttct tcaccaaagg
    16561 gaactaaaaa atgcttattt aaaatataga cattgccttt tttaaagata taagtactat
    16621 tgtaagtatg ctctttttca acatgaaatg ctcctgtaat aatggtgatt ttataagata
    16681 attctttaag cataagctca tatttggtat tttttaaatc aaaagcaaaa gcggtttcag
    16741 gcaagattac aagttctttt ttttcattta tagcttgaag tatatcttga attaagatat
    16801 cagaatttga ttttaaattt tcttgtaaaa atttttgatc ttgagagata ttagtattga
    16861 tgagtttgta gtttaaatta agagtttgag cttgtttttc attatattga aatccactaa
    16921 agaataaaat aagaacaatt gctattttat aatatcttga tatataaccc tcatagatga
    16981 aatatgctat taaaaatatg caaataatgc cacgataact tgggtcaaaa aaaccataaa
    17041 ctgtaaaaat cccccaatta aaccaatcaa atcctaaagg atggataaaa cttatgcaaa
    17101 aaattccaca aagccttaaa aaatcaaatt ttaataaata acataatcta aaaagtaacc
    17161 cataaataaa accaatgata attggtataa ttggtactaa atagtttaga ttaaaataaa
    17221 ttgaagataa accaatccac caaaaccaaa gaatccctac aaaaaaacct atccaaaaat
    17281 attgtttaga agttttactt tttagaagta aaactaaccc ccaaatagct aaaaatggac
    17341 taatggtttg tgtaaaaata ttttcaaaaa atgatagata aatagaattt gaaagtaaaa
    17401 ttgcaataaa aaagactttt attattttaa aaatgataga attagtgttt aatttttttg
    17461 gaataaagga aaaatatggc agaaaattca attttaactt cattgttacc tcttgtagtg
    17521 ttatttgcaa ttttttattt cttggtgatc agaccgcaac aaaaacaagc aaaagcacat
    17581 aaacaaatgc ttgagtcttt gcaaaaagga gataaaatca tcactaatgg cggacttatt
    17641 tgtgaagtcg taaaaccaga ggaggatttt atcaaagtta agcttaatga agacaatgtt
    17701 actgcaaaaa tttcaagaga atttatagca aagaaaattg atgcgtaatt ctaaaatcaa
    17761 ttatcgcttg attattttta tagcggtatt tatttttgga gtggcttttt cactcccttc
    17821 ttttttgcag tcagaacgtg gtgcgaagat taatttaggg cttgatttgc aaggtgggct
    17881 ttatatgctc ttaggtgtag ataatgaaga agctgtaaaa tctaaaataa aatcaattgc
    17941 atcttcattg agttattctt ttaataaaga aaatatttta aatgatggct taaataccca
    18001 tgatgatatt ttagaattta ctttgcttga taatgcagat attgcaaaag ttgaaaattt
    18061 gcttaaagaa ataaaaggaa ttaatataca aagtgaaaat atgcactata aaatttcttt
    18121 tacctcagaa gaagtaaaaa atatagaaaa ttttgcactt ttgcaagcag ttgaaaccat
    18181 aagaaatagg cttgatcaat ttggtttagc agagccaaca gttgctaaac aaggtgatga
    18241 taagattttg gttgaacttg cagggattaa aaccaaagaa gatgaactaa gagcaaaaga
    18301 acgcatcaca aaagcagcgc atttgcaact tatggaagtt gatgattcta aaatgggtca
    18361 agcttctaca atgagcgatg ctgaggctgc gagttatgga ctgattttag tgcctgattc
    18421 tagaaatcca aatttaaaat ataccttaaa aagtatacct attttagatg gatctatgct
    18481 tactgatgct agagtaggac ttagcgataa gagtaattat cctgtgatta attttacttt
    18541 aaatgctgag ggttctaaaa aatttgctga ttatacagga gcaaatgttg gaaagcgtct
    18601 tgctattgta cttgataata aagtatattc tgctccatct atcaatgaac gcataggcgg
    18661 aggtagtggg caaatcagtg gagcttttac tcaagaagaa gcacgcgatg tggcggtagc
    18721 tttaagaagt ggagctttgc ttgcgcctgt aaaattactt gaacaaagaa gcataggacc
    18781 atctttaggt gctgatagta ttaaaatgag tatgatagcc ttaattggtg catcggcttt
    18841 tattgtaata tttatgatga tgtattacgg tgtggcagga atttttgcaa atattgcaat
    18901 gttagttaat gttttggtag tagtggctgt tatggctatg tttggagcaa ctttaacttt
    18961 accagggatg gcaggacttg ttttaactgt gggtatggca gtagatgcaa atgtgattat
    19021 caatgagcgc atacgagaac tcttgcgaga tggagtaaat ataagagcta gtatagaaca
    19081 aggttataaa aatgctatga gtgcgattat agattcaaat atcacttctt tagttacttc
    19141 ggtagcgctt tatgcctatg gaacaggagc agttaaaggt tttgctgtga ctttgggaat
    19201 tggtattgtt gtttctatga ttacagctat tttaggaact cacggaatgt ttgattattt
    19261 tatgcaacgc atagaaaaaa gtaataatac aagattttgg tttggttaca ggagaagata
    19321 atgcagtttt ttagcgaaaa gaaaatttat gattttatga gaatgcgttt tgctgctatt
    19381 tctctttctt ttattttgtt ttttggttct atttatttgc tttgggatag gggtttgcaa
    19441 tatggcattg attttagcgg aggaacttta gttcagctta aatatgaaaa tgcagctcct
    19501 ataacacaaa ttcgagaaat tttagaaaat caaggaactt ttcaaaattt atctgtaact
    19561 gaatttggaa gcaatgaaga agtaatcata cgctttttag gaagtaatga taatgtaagc
    19621 aatgatatag gtgagcatat aagcactctt ttaaaggata cgggaaaatt tgaagtgcgt
    19681 cgtgctgatg tggtaggtcc aaaagtaggt gatgaactta gaaataaagg acttatggct
    19741 atagctgtat ctttgatagc aattttaatt tatatagcgt tgcgttttga gtggcgtttt
    19801 gctcttgcgg ctataatcag tgaaattcat gatgttgtga ttactttagg ggcaatttct
    19861 ttatttaaaa ttgatgtcaa tctagatact ttggctgctg ttttaactgt gcttgggtac
    19921 tctttgaatg atacaattat tatttttgat agaatcagag aaggtattaa aacaagtaaa
    19981 aaaaccgaac ttgcacctat tatcaatgaa agtgtttcag caactttgtc aagaacggtt
    20041 ttaacttcag ggttaacttt agcaactgtt gtgatacttt atttctttgg cggggaaatg
    20101 atacaaggat tttctttggc tttaattgta ggtattatag cgggaacttt aagctctatt
    20161 tttgttgcaa gtccgacatt attatggttt aaatttagtg tgcttgagtt tagaaataaa
    20221 gaaattgaaa aagcaaaaag aaaacaagat aaagaacgca atcgtgcaat gtatgaaaaa
    20281 ggaactgtgt aaggagaatt tatggcttat gaagcaagtt taatagaaaa aaaatggcaa
    20341 aaaatttggg atgaaaatga atattttgag ccaaaagatg acttaaattt gcctaaaaaa
    20401 tatattttat cgatgtttcc ttatcctagc ggacgcattc acatggggca tgtaagaaat
    20461 tatactatag gtgatgcttt agcaagatat tatcgcaaga taggttttaa tgttttacat
    20521 cctataggtt ttgatagttt tggcatgcct gctgaaaatg cagctattaa acataaaatt
    20581 catcctaagt catggactta tgaaaatata gcttatatga aaaaagaact tttttcttta
    20641 ggtttttctt tttctaaaaa aagaatgctt gctacttcag atccacttta tacaaaattt
    20701 gagcaagaat tttttattaa gatgtttgaa aaaggtttga tttacactaa agaagcaaat
    20761 gtaaattggt gtgaacaaga tcaaacggtt ttggctaatg agcaagttga agacggaaaa
    20821 tgttggcgtt gtggtcatga agtggtgcag aaaaaaatgc caggttatta tgtaaaaatc
    20881 actgcttatg ctgaggaact tttaaaagat ttagaagaat taaaagataa atggcctaat
    20941 caagttttaa ctatgcaaga aaattggatt ggtaaaagcg aaggtttgga attttcttta
    21001 aatttagacg aagaaagtaa gcaaaaaacc aaagaaagtt ctttagaagt ttttactaca
    21061 agagcagata caatttatgg agtttcgtat atcgctttag ctccagaaca taagattgtt
    21121 caaaatttgc tttcacaaaa tttattaaat caagatgtat taaataaaat caaagttatt
    21181 caaaatcaaa gcccaagaga aagacaaagt tctgaaaaag aaggttattt tttaggaatt
    21241 tatgccattc atcctttaag cggagaaaaa attcctttat gggtggctaa ttttgtcttg
    21301 gctgattatg gtagtggagc ggttatggct gttccagctc atgatgaaag agattttgaa
    21361 tttgcaacaa aatataatct tgccatcaaa caagttattc aaactcaaga aaatttacct
    21421 tatatgcaaa aattaggaaa attaattaat agtcaagaat ttgataatct tgattgtaat
    21481 gaagcaagat taaaaatcat ttctcagttt gaagctaaaa atataggaaa aagggttgta
    21541 aattttaaaa ttcgtgattg gggtgtttcg cgtcaaagat attggggtgc gcctattcct
    21601 atgattaaat gtcaaagttg tggtatagta cctcaaaaac tagaaaattt acctattact
    21661 ctgcccgaag atgtgcaaat tacaggtgag ggtaatccac ttgataaaca tccaacttgg
    21721 aaaaattgta tctgtccaaa atgtggtaaa gaggctcaaa aagaaagcga tactttagat
    21781 actttttttg aaagttcttg gtattttgca cgttttgcaa gtgatgagaa aacttggcag
    21841 gaaaaagctt tagatgaaaa aagtgtaaag tattggatga gtgtggatca atatataggt
    21901 ggtattgaac atgcaatctt gcatttactt tatgcgagat ttttccaaaa agctttaaga
    21961 gatttgggtt atttaacaca aaatgaacct tttgatagac ttttaactca gggtatggtg
    22021 ttaaaagatg gtgctaaaat gtcaaaatca aaaggcaatg ttgtagatcc tgatgagatt
    22081 atagaaaaat acggtgctga taccgcaaga ctttttatac tttttgctgc gcctccggct
    22141 aaagagcttg aatggaatga tgatgcggtt gaaggggctt atagatttat ttgcaaactc
    22201 tatgataggg cgcaaaatgt taaaaaaggt gagcttgtag aattaaaaca agaaaattta
    22261 aacaaagaag aaaaatatgc aagattaaag gtatatgaag ctttgaaaaa atcttttgaa
    22321 gtttatcatc aaagttttgc ttttaatact ttaattgcag cttgtatgga agctttaaat
    22381 gctttagcac tttgtaaaaa tgaagctttg gagcaagagg ctttttatat tattttaaat
    22441 attttagagc ctattattcc tcatgtttgt tttgagctta gcgaggagct ttttaaatgt
    22501 aaaaatttca aaaaattaga acttaaagaa gaggtttttg taaaagatac tttaaattta
    22561 gctgtaagta ttaatggtaa aaaaagggct gaatttgaaa tttcaagtag tgcgagcaaa
    22621 gaagaaattt tagcttttgc aaaagaaaat actgctaaat ggcttgaagg taagagtata
    22681 gttaaagaaa tttatgtgga aggaaagcta gttaatctag tgattaaatg aaaaagattt
    22741 taattttttg tataggttta tttttaggtg cttgtggata tattcctaca tcaaaaatcg
    22801 ctaataatat tttcgatgag aaggtttatg ttaatgttga attaagtcaa caagacccaa
    22861 aaaatagtat ctatgttgcc gatactttaa aagaaatggt aatttcaaaa ttagggcgta
    22921 aacttgcttt aaaacacgag gcagatgatg taattaatgt taaaatgaat aatttagaat
    22981 ttattccttt agcttatgat aaaaatggct atgttattag ttataaagct aaattaaatt
    23041 tagattttaa tgttgtcttt aaagatggtt caagtcaggc ttttagtaca agtggaagtt
    23101 ataattttga aatttctcca aatagtatta ttagtgattc tgcaaggtat gaggctattc
    23161 gagcagcttc aagcgaggca tttgatgagt ttatttccgt aattgctatt aaagggcaaa
    23221 aacgtgattc caaatactaa tgaaatagca aagcaaactt taattgcatt aaaagaaaga
    23281 aaactaaaac caactcctga aaattatacg gaaatttttg aagaattatc tttaaaatat
    23341 ggtatcacaa gctcaaataa agctaaactt gacaaataca aaaccttgct tttgccgatt
    23401 tatcaacaag aattaaattc taaaactata agaagtttag aagaactaat tagtttttta
    23461 atttctgttt taaatagaca aagcggaaaa caatttagtg aattttttga ttttttatat
    23521 accatatcta aaactttgca aataagtaag gataaaaaga taagagattt ggctaaggtg
    23581 acttcgatta gaatttctaa aactatggat agtgaaagta tttacttgct tactaaaaaa
    23641 tggaaagagc ttgaaagaaa ttatgatgaa aatgacttag aagaacaagc tcgtaaatat
    23701 ggcattagta aatatgatga ttatgatagc gtgattaaaa aactcttagt caagcttgaa
    23761 gagcgtagtt atgagcactt tagtgaatta ttatgcttgg gtttaaatcc ttcattggta
    23821 gaagatttaa aaattcaagg ttttatacaa aatttaacac aaaagccttt tgtaataggc
    23881 gaagaaaatt ttaaaaatga actaatggaa tttataaatc atcgcataat ggttgataat
    23941 atgtatgtcc aaaaaaattt aaattttttt aacgataatc taaaaaaaat ctatgaattg
    24001 cttgtcttac ttaataaatc gaatgaaaaa aatatggatt ttatcaatac cttaaaacca
    24061 gatgaaaatg gggaagtaaa acttagtttt gaggatttaa aactaaaatt taaacaactt
    24121 ggagaaaaaa ttacatcttt aaataatcaa attgaattca cgcaaagctt agaagagaga
    24181 gaggcttgga gtgttcttaa agagcttgat aaaatggatg aaaattttaa taagtataaa
    24241 gttaattatt ctttagcttt attttctata gtaaattacc gtttcattat ggaaaaatat
    24301 ggtatgggaa gtttgaatga aatttttgtt cgatttaaaa aaattttaaa agattcttgt
    24361 agtgaatttg atgaactgtg gatgatagat gaaaagagtt atttgattgt ttcgccagga
    24421 aaaagcaaag atgaaattac acagcttgta aatacaaatc ttaaaactat agaaaatttt
    24481 agatttattt ataagcaaga tattataact cctaaaattc acgtggctta tcttgataag
    24541 caaagtaagc caagtattaa tattttagat gagttaataa agcaaattgc agcggttaat
    24601 gaacaacata atgaaagttg agaatttttt agctcaaaaa agtataaatt acgataaaat
    24661 tgatcgtttt ttgatgttta gaatgtatga aaaatataag aaatatttta aaaatattcc
    24721 tataatccaa cttataggca caaatggtaa aggtagcacg ggtagatatt taacccaact
    24781 tttagaaaat ttaaattata aaatagggca ttatactagc ccgcacattt tcagttttaa
    24841 tgaaagattt tatcttgatg gtaagattgc gaatgatgaa gaattagaac aagctcatat
    24901 aagacttgaa gaaattttta aacaagactt gcaaaaatta agttatttcg aatatgctac
    24961 ttttttagct atgattttat ttcaaaaatg cgatttcatt gttttagaag caggagtggg
    25021 tggagaatat gatgctactt ctatttttga aagaagaatg agtattttta caagaattgg
    25081 atttgaccat attcaaattt tgggcaattc tttagaagat attgcaagaa ccaagcttaa
    25141 agttatggca cctatagcac ttataagtga tgagcaagag caaaatgttt taaatttagc
    25201 aaaaaaaatt gcttttttaa aaaaagctaa tttgcaagtt tcctccttaa atcctttttt
    25261 gaaagaaaaa tttgagattt attgtaaaaa gtttgtttta ccttattttt taaagcataa
    25321 tttaaagctt gcattaaagg cttgtgaaat tttaacttcg caagaaaaaa ccttagaagc
    25381 tttaaaaaag ttacaagagt taaatttaca aggaagatgc caagaaattt ctccaaattt
    25441 ttttgttgat gtgggtcata atcccatggc tgctaaggcc atgcttgata aatttcaagg
    25501 agaaaaaata aatcttattt ataatgctta tttggataag gatatttttc aaattttaaa
    25561 tacattaaag cctattattg atacaataca aatatataaa tataaaagtg cagaacgaaa
    25621 gctggccgat gatgaaattt atagtattgc atcaaagcta ggcatgcaat gtaaagaatt
    25681 tgtaaaatta gaagagaata aaaaaaatct agtttttggt tcttttatgc tggtagaaaa
    25741 ttttttaaag gagtggtgtg gtaaaaaata aattcactat taccattaca gatattaacg
    25801 gttcaagaca tttttattta aatcaaataa tcaaaaaaat agttttttat attattgctt
    25861 ttattgtttt atttttagtt tttagtggtt tttatatcaa atatctcgat agcaaactta
    25921 gtgatatcag tgaaaagcgt gaggagcttt tgaaaaaaag caaagaattg gaattatcta
    25981 attcgcaaat gcaaaaaagc atagaagaaa aaactcagca gtatgcagct atagaagata
    26041 aaatagcttc ttttgaagag gctttgggct tagaagcaga aaataatctt acaattagtg
    26101 caagacttga taatcttcag cttaccaatg agcagcaact tggaattttg gggcaaattc
    26161 ctaatggatg gcctattgaa aataaaggca ttacaggaaa ttttggctgg agagagcatc
    26221 cgcttttaaa aagaagggaa tttcatcctg gtattgattt aagagcagaa attggtactc
    26281 ctatttatgc accagcaagt ggagtagtgg aattttcagg ttatagtgat aatggctatg
    26341 gctataatgt aattttattg cataattttg gttttaaaac agtatttgct catatgatgc
    26401 gcaaagaagt ggtcaaagca ggtcaatttg ttaataaagg gcagttgata ggttatagtg
    26461 gcaatacagg tctttctacg gggccgcatt tgcactatga ggtaaggttt attaataaaa
    26521 ctttagaacc tttgtatttt ttaaatttgc aaagaaaaaa tatgaatgat ttttttaatc
    26581 aagaaaggag agttccatgg caatctttaa taaaggcggt atcagcccaa catccagctc
    26641 tagctcagaa acaacagtaa tttcttcagg tgcgagaatt gagggtaaat tttattttgc
    26701 ttctatgctt catgttgatg gagagttaag tggtattatt cattctgaaa gcattgtggt
    26761 tatcggaaaa aatggaaatt taaaaggtga attacaagca gataaaattg tagtaaatgg
    26821 gtgttttgaa gggcaacttg aggctaatag tttagaaatt ttagcgggcg gagttgttaa
    26881 tggtgatatt tcaacgcaaa aaatttctat agaaaatggc ggtcgcttta atggaactag
    26941 taaaattaaa gaagatacta tcaaacttat tgaaaataac aacgaagaat aatgcaagct
    27001 tcattttatg aatacttaca aaatccaaaa atttgtgaac tttttctttg taaagatgaa
    27061 aaacaagcag atttactcgc tcaagtttca cgatttaagg gtttaaaaac ctttgtttta
    27121 cctgatttta gagcgcagtt tggagatgat ttaagggctt tttctaaaga actttttgat
    27181 ctttgtaaga ttttaaatgc ttatcataaa gaagaagaaa aaaaaatcct tatttctcct
    27241 ttaaatactg ttttaaaaaa acttccttca aaaaaacatt tacaaaatta tcatatcgat
    27301 aaaaaacaaa attttgattt gaaatgtttt gaagatgaaa tttcaagatt gggatacgaa
    27361 tttgtagata tagttcagga taaaggtgaa atttcaattc gtgcggatat tattgatatt
    27421 ttttgtatca atgaagaaaa tcctattaga attttacttt ttggcgaaga gattgaaagt
    27481 ataagatatt ttgatttgca aagtcaaaag tctattccta acgaactaga acattttgaa
    27541 atttgtcctt ttttaaaata ttttgacaaa gaaaattatg aaatttttaa ggacaaatta
    27601 gaagattttc aaagcgatgc tttaatacat gatatcaatt ctttaggctt ttggtgtatt
    27661 gatgattttt ttgattattt agaacttgat tttttagctt gtgaaaagtt tgatattaat
    27721 gaatatgaaa aggatataag ttttgtgaat gcaaaaattt tacctcaagc taaaaaattt
    27781 aaagaattgc aaagttctta caataaagat ttttttgaat ttcataaaaa taaaaaaatc
    27841 acacttttag ctaaaaacga agctttattt aaagctttag agcttgaaga tactcaaaat
    27901 atccattttg taaaaagtga tttaaggctt aatcttatta gtcctgaaga gctaattatt
    27961 tctttaaatc aaaaagaaaa acaaaaaaca agaaaaaaag ctagtttgat tatagatgag
    28021 cttaaaaatg gggattatat agtacacgaa gattatgggg taggtaaatt tttaggtctt
    28081 gagatgatag tgataagcgg agcaaaaaaa gagtttgttg ctatagagta tcaaaattct
    28141 gataagcttt tattaccagt ggaaaatctt tatttgattg ataaatattt gggcgtgagt
    28201 ggatctattc caagcttaga taaactaggt aaaacaagct ttattaaact taaagaaaaa
    28261 ttaaagacta aacttttagc catagcttct gaaattgtta ttatggcggc taaaagatct
    28321 ttggtgcaag caaaaaaaat tacagtggat ttaaatagac agactgattt tatagctagt
    28381 gcgggtttta tttatacaag cgatcaagat aaagcctgtc atgaaatttt gcaagatttt
    28441 caaagtggaa aagtcatgga taggctttta agcggtgatg tgggttttgg aaaaacagaa
    28501 gtcgctatga atgctattta tccagtagtt aaaagtggat tttgcgcatt tttatttgcg
    28561 cctacgactt tgctttctca tcagcattat aaaaccttaa aaaagcgttt tgatcctttt
    28621 gatataaagg tttttaaact ggatcgcttt acaagtagtg cagaaaaaaa acaagtttta
    28681 caaaatttaa aagaaaataa agcttgtgta gttgtaggaa ctcatgcact tttaagtgta
    28741 gaatgtgaaa atttagccct tgttattatt gatgaagagc ataaatttgg agtgaagcaa
    28801 aaagaaaagc ttaaagaaat cactcaaaat tcacatattt tatccatgtc agcaacccct
    28861 ataccaagaa gcttaaatca agctttaagt tctataaaat cttatagtgt tttgcaaact
    28921 ccaccagaag atagaatgga tgtaagaact tttgtcaaag aaaatgatga cgcactttta
    28981 aaagaagcta tagcaagaga gttaagacgt ggtgggcaaa ttttttatat tcataatcat
    29041 attgcaagta tagagcaatg taaaaagcat ctattagaac ttttttctac tttgcgtatt
    29101 ttgattttac attctaaaat cgatgccaag atgcaagaag aagaaatgtt gaaatttgaa
    29161 aacaaagaat atgatttgct tttaagtacc tctatcgtag aaagtgggat tgatttacca
    29221 aatgcaaata ctatcatagt agaaaaaagc gatcgttttg gcatggctga tttgcatcaa
    29281 ttgcgtgggc gtgtaggaag aagtgataag caaggttatt gttatttttt aattgaagat
    29341 aaaaatgcta tcacaaaaga tgctttaaag cgtctagttt ccttagaaag taattctttt
    29401 ttaggcgcag gttctatttt ggcttatcat gatcttgaaa ttcgtggcgg tggaaattta
    29461 ttaggcgtag atcaaagtgg acatattgag caaattggat atagtttata tcttaaaatg
    29521 ttagaagatg aacttaatgc tttaagtaaa aatgaagtgg atcaaaaaga aaataaactt
    29581 gatttaaaac tcaatgttaa tgccttttta aacagcgaac ttatcagcga agatcgctta
    29641 agattagaac tttatagaag acttagcaag tgtgagcaag ttcatgaggt ttatgagatc
    29701 gaaggtgaaa ttgaagatcg ctttggaaaa attgacattt atactaagca atttttatct
    29761 ttgattacta ttaaaatttt agctttaaat aaatttaaaa gcattagtaa ctatgagcaa
    29821 aatattcaat ttactgcttt aaatgatgaa aaagaactca tcaaggcaaa aagcaaagat
    29881 gatgatgata ttttagaggc aattttaacg catttaagaa aggcttaaaa tggattggaa
    29941 taaaacttat gcagcaattt atagagcaag aaaagattat ttaaagccta tttttgaaat
    30001 cgatcctatt gctttaaaag atttagtagg tatggaaagt caaaaaaaag cactttatga
    30061 aaatacttta aatttcattc aagataaggg agcaaatcac gcacttttat ggggatctaa
    30121 gggcactgga aaatcaagtt taattaaagc tatatttaat gaatttaaag aacagggctt
    30181 aagacttgtc gaattaaata aagaagattt atttgcctta gcagatatca tcgatgaaat
    30241 cagattagaa aattttaaat tcatactttt ttgtgatgat ttttcttttg aaaagggaga
    30301 tgatagttat aaatttttaa aacctttact tgagggaagc atagaaaaag ccccaaataa
    30361 tgtaattatt tatgcgagtt caaatcgtag gcatttatta agtgaaagca ttactgataa
    30421 tcttgatacg caaatcacac atacagaact tcatttaagc gatgctgctg aagaaagatt
    30481 aagtttgagt gatagatttg gtttgtggtt aagtttttat cagggaaatt tagaagagta
    30541 tttaaagatg atagattttt attttaaaga ttattcttgt gataaagagc ttttgcacgc
    30601 taaagctaaa gaatttgcta ctctaagagc aagtagaagt ggtcgtaccg caaagcaatt
    30661 ttatttagct tttaaggaga attttaaatg actggagcac aaatttttac caagctttta
    30721 aatttggatt taaattatca tgattttgat tggcttgaaa atcaaggatt gagtgaattt
    30781 gagcttttaa tttctgtcgt tttaactcaa aatacaaatt ggaaaaatgt cttaaaagct
    30841 ttagaaaatt taaaaaaaga aaatattgca agcttagaac aaatcaatac tttatccaat
    30901 ttagaacttg caactttaat taagcctagc ggattttata ataccaaaac taagcgttta
    30961 aaaggtttgg tagaaagtat cataaacact tatgaaaatt tagaaaattt taaaacaaat
    31021 gcaagcagag aatggctttt aaatatcaaa ggtttaggtt ttgaaagcgt tgatagtatt
    31081 ttaaactatc tttgcaaaag agagattttg gttgtagata attatagttt gcgtttggct
    31141 ttttacttag gttatgagtt tgaaaattat gaagaattaa gagaattttt tcaaagtgac
    31201 atagagagtg agcaagaaaa tttgtataaa attttaggaa aaaaatgcga actttacgaa
    31261 ctttatcaaa tttttcatgc tttgattgta gcttttgcaa aacagagttt taaaggacaa
    31321 aaattaagcc ctaagggtga agaatggatc aaaattttaa aggaagattt atgaaagcaa
    31381 aaggaagtga acttatacct gttttaacta tagcagggag tgattgtagt ggtggagcag
    31441 ggatacaagc cgatcttaaa acctttagtg cacacaatct ttttggtatg agtgtggttt
    31501 taagtgtggt agctgaaaat accgcaaggg tgatttctgt acacgatata cctactcaaa
    31561 gcgtggatga acaaatgctt gccgtgtttg aagatatagt gccaaaggca actaaaatcg
    31621 gaatgatagg ttcttgtgaa ttaatgagct gtgtagctaa aaatttaagc gagtttaaac
    31681 ctcaaaatgt agttattgat cctgtaatgt ttgccaaaaa tggccatgct ttaatgccgc
    31741 aagaaaattg tgattttttc aaacaaacta taataaaatt tgcagacatt cttactccta
    31801 atattcctga agcagagttt ttatgtggtt ttaagatcgc taatgaagag cagatgataa
    31861 aagcagctaa gcatttatgc agcttggggg ctaaggcagt tttacttaaa ggcggacata
    31921 gtgaagcaaa tgccaatgat gtgctttata atggaaaaga aatttatatt ttaaaaggcg
    31981 aacgcataga aactaaaaat actcacggta caggttgtac gctttcttcg gctattgcta
    32041 gtaatttagc taaaggcaag gatttatttc acgctgttag tgaagctaaa gagtatgtaa
    32101 gaaatgcgat ttattattca cttaatcttg gaaaaggttg tggtcctaca aatcattttt
    32161 tcaagtttct agatgaaaaa taaattagat cttagccttt atttggttgc tactaaggga
    32221 aataaaagcg aggagtgttt tttaaatact ttagaaaatg ctataaaagg cggagtaagt
    32281 atcatacaac ttcgtgaaaa agagcttaat gcaagagaat tttataaact aggcttaaag
    32341 gtgcaaaaac tttgcaagtc ttataaaata ccttttttga ttaacgatag ggtggatata
    32401 gctttagcct tagatgctga tggggtgcat ttaggacagg aagatttaga agcaaaatta
    32461 gctagaaagc ttttaggaga tgaaaaaatc ataggcttaa gtcttaaaaa gttagaacaa
    32521 cttgagttta tacaaggagt aaattatcta ggttgtggag ctattaaggc aacgcctact
    32581 aaagaaagtt cgcttttaag ccttgagctt ttaagtcaaa tttgtgataa aagccctata
    32641 ggggttgtag ccataggtgg gattgacaaa gaagcacttg ttgagttaaa gggtataaat
    32701 ttaagcggtg tggctgtggt tagggcgatc atggatgcta aagatgcttt tttggcagct
    32761 aaagagctaa agcgtaaaat ctatgaaaat ttatctctta aatgaaactc cttttgaagg
    32821 ggtggaaaat cttattttaa atgagattgt tttttatgat tttagtgtgg atttgagttt
    32881 gtatgatgct ttaatctgca cttcaaaaaa tgctttaaaa gctttacaac atgcaaaaat
    32941 cactttaaat ttcaaactca atttatacgc tgtgggacaa agtacagctc aatacgctaa
    33001 aaatttaggt tttaaaaaga ttaaaattcc atcaaaggct tatggaaaag atctttttct
    33061 tgaatttaaa gaggagttaa aaatgcaaaa atgtttgtat ttaagggcta aaaatattgt
    33121 ttcaacttta aatttggatc ttaaaaatgt aggtgtggat ttagatgaaa tgattgttta
    33181 tgaaaatgtt tttaaaaaag gcgacaaaaa gcttatctat cctgctattt ttatattcac
    33241 ctctccttta agtgtagaaa attttttaaa attttatagc ttaaaagaag aagataaggt
    33301 tgtagttata gggcaaagca cagcaaagaa gcttttaaat tttaaaaatc tttatatatg
    33361 cgaaaatcaa agtcttttag actgtgttaa gctcgctaag actttggttt aattttttaa
    33421 attccaaaaa ttttctttgg gataaataat aatgcttttt gtgagtaaaa tttcatcatt
    33481 gacgttttta tcacgattta aagcaatact aatgtgggct atgataacac catctttgtt
    33541 taaatttgca tcgggattga agttggaaaa tttaaaatta acacattgtg caataggata
    33601 aaaatatttt attttaatca aagcttttgt gtaattaaaa tatatattat ctaaacattc
    33661 tttattttct tgccttgctt gatataaaaa atatttagaa aattgtgttg cattatgact
    33721 taaaatttga gcttgaaggt agtaataact atcttggatt atttttggag tatagctgga
    33781 tatgtttaag gtcaagctca tccatagact tattagtagt attaaaaaaa ttgtccaaat
    33841 taaaacataa gcttttttca tagtaaaatt ctttttttaa gacaatattt tgtttgtctt
    33901 tttagacaaa tttttaattt attgttttgc aggttaaatg agcttatgtt tttagaaatc
    33961 aatccttgtt ggcttaattg ttcattaaat tttggcttta tttcatatat aagttcttca
    34021 ttttgcaatt tgataactaa ttgagcttgc aaaggaataa aactgcctgt aaaatttgca
    34081 gatataccat tttccaagat agatattttt tcaatcttat taattttata agcatagcta
    34141 atatgttcat tgtcgttata taaatctttt ctattttgga gttgtgtttt aaaatcagaa
    34201 tgaggtgaat aaagtgtatg attattttct aaaataagag cagaattaat aagataaagt
    34261 ttattatctt ttaggctaat taactcatct tttaaaagac attttaatgt attctgtgaa
    34321 aatgtaatat taatacaatt ttgtattaat ttttctattt taagcaagtt taaatgtgct
    34381 tgagtgataa gattgtttgt atgtaaagca gtaaaattta aatgataaaa atccattaaa
    34441 ggttttgaaa gtaagttagt tataaaagta aaaagtatta gtgatattat aagttcaaaa
    34501 agtgtaaaag ctttgctcat tctttaaaat aaacgctata attttgatct tgaaagtata
    34561 atttttgaaa ttgaaatata ccgtcattaa caaactgttc ttgtaaaact ataggtttta
    34621 aggctgaagt ttgaagtatg atggttttaa aaataggctt ttcatataat tcttcttgaa
    34681 gtttatagag tctttcaaaa atatttaaat tttcatagtt tttgtaaagt tgaatatagt
    34741 aataaaaaat gccaatgaaa attaaagata tgatcgttat agcactaatg ctttctataa
    34801 gtatgaaagc ctttttcatt tagcgctgct agcatttatg gcttcaaaaa aacttccgcg
    34861 aattcctttt tgttcgagta tttttatgcc ttttattgta actccgccag gggagcaaat
    34921 attttctttg ataatagctg gatgttcatg ttctagtaaa gcactagagc ttttaaataa
    34981 agagcgcgta agattgagac taagttcttt tgacaaacct tcataaactc cagcattagc
    35041 aatgctttct gctataagtg ctaaaaaagc aggagcgcag ccgctaatcg ccatagctgc
    35101 attcatttgt atttcattat ctaatttata agccgagcca aaagttttta aaatgtctaa
    35161 aatttcattt tcaaaatgag agtttttaag tatatatggt gtggttgaag ccttgtattt
    35221 agctgctgta ttgggtatta ttctaacata attttgagct ttgatggttt gtagtttttc
    35281 aaaatcaaca ttggctaaaa cagagattaa gatacgtgct tgtcctttta gcatttgagc
    35341 aatattttct aaagcataag gtttaaatgc taaaataaca tctttacctt ctatgttaaa
    35401 atctttgtaa agtaaggttt taaagccttc tttggcgagg gcttgaagtt tttctatact
    35461 tcttcctact atacaaattt cataatcatc ttttaaccca taggctaagg ctgttgccat
    35521 agatccattt gcaagtatat agagcattat tttttaatat aattagcaat ttgatcagct
    35581 tgaaaaaagt cgggataatt aactgtatct agtatcactt gtaccatagt attattatca
    35641 agattaatga ctactggagc tagaaaattc actgtcgatt cttcaatgct ttttgctatg
    35701 gctactatat taaaaatttt catattagat tcaggtgtta aagaaagaag ctcttgataa
    35761 taagttggta tatcaaattc ataatcaggt ctaatcaaat aaggattaat taaaacaaaa
    35821 gaaaagtctt taccatcaag acttttaagt cttacaaata cttcatcgat agttgaaaat
    35881 tccatatttt tggtttcttc aaaacctaag atagggcatt taacagctag ggtcatgttt
    35941 tctcctcaag ttataatgtt taatatttta acataaaata agcaataatc attccaaaat
    36001 tttaaattat ttaattaatt ttattataat tttagaagaa cataattata aaatcgttaa
    36061 aatatatatt tttgagaata taaatcaagg tgaagtatga aaaaaggtat ttttttattg
    36121 gtttttttaa gtattttttt tagtgcgtgt agtacgaaaa atgatgaagg tttatacaat
    36181 cttagtgcta gtgagtggta taagcaaatt attaaagatt tgcaggacaa ggatttggaa
    36241 aaagctgatg atcattataa tggtatggca agtgagcatg ttgccgatcc tttattagaa
    36301 actactttaa ttattttagc acaagctcat atggatgaag aggaatataa gttagctgaa
    36361 ttttatttag atgaatataa taaaaaattt ggaaattcac gcaatgctga ttatattcgt
    36421 tatcttaaaa ttaaggcaaa atttgatgca tttgcagtgc caaatcgtaa tcaggcttta
    36481 atgcttgaaa gccaaaaaga aatagatact tttttgaaag attatcctta tacagaatat
    36541 gaacctttgg ttcaaacaat gcttacaaaa tttaatttag cggtttttta tcttaatagt
    36601 actatagaaa atctatacca gcgcataggg catgatgaaa gtgcacaaat ttataaacaa
    36661 agacttcaag aaagtgaatt ttatcagcaa agtattatca aacctgagct tccttggtat
    36721 agaagtatat ttgaaagatt ttaataaaca aggaaaataa atgcagattg aagagataca
    36781 aaattatcca gcaaatttac cagtattggt tgaagatgaa ttatttttat atccttttat
    36841 gataactcct atttttatta acgatttatc caatatgaaa gctttagatc tcgcgattaa
    36901 aaatgatagc atgctttttg ttgcaccttc aaagttggaa aatggaagaa attttgatga
    36961 aatttataat tgcggagtga ttgggactat catgcgaaaa gttcctttgc ctgatggaag
    37021 agtgaaaata ctttttcaag gatatgccaa gggtaaaatt atagagcaaa tttctaataa
    37081 acctttagaa gccaagatag aacttataaa agaagacttt ttagaaggaa ctaaaaaaga
    37141 agcacttctt gaagttttaa aagagaaagt aaaaaatttg gcaaatatta gtcattattt
    37201 ttctccagat cttttaagaa caattgaaga aggttttgat gcatctagga tttgcgattt
    37261 gattttaaat actgtgcgta ttaaaaaaca agttgcttat gagttttttg ttttaacaga
    37321 tcttgagcaa aaattagtaa aattaataga tttaattgct caagaaatag aagctaataa
    37381 aattcaaaaa gaaattaaaa ataaagtaca ttctcgtatt gataaggtaa ataaagaata
    37441 ttttttaaaa gaacaattaa gacaaattca aaaagagctt ggttctgata cgcaaaaaga
    37501 agatgaggtt agagagtatc aaaagcgtct ggagttaaag aagaaattta tgcacgaaga
    37561 cgcttataaa gaaatcaaaa aacaaattga aaaattcgaa cgcattcatc aagataattc
    37621 cgaagcatcg atgattcaaa cttacataga aacagcatta gatgttcctt ttgaaaaaat
    37681 ttctaagaaa aaacttgata ttaaggaagt ttcaaaacag ctcaaccatg atcattatgc
    37741 attaaataaa ccaaaagaac gcatagaaga atattttgca gttagggagc ttttagaaaa
    37801 aagaaaaata gcagaaaaag atggtgctaa agttatactt tgtctttatg ggcctcctgg
    37861 cgtgggtaaa acttcactgg caaattctgt ttcaaaagct ttaaaaagag agcttattcg
    37921 tatagcctta ggtggacttg aagatgttaa tgagctgcgt ggtcatcgta gaacttacat
    37981 aggcgctatg cctggacgta ttactcaagg actcatagag gcaaaacaaa ttaatcctgt
    38041 aattgtattg gatgaaattg ataaattaaa tcgcagtttt agaggcgatc caagtgcggt
    38101 gcttttagaa attttagatc cagagcaaaa ttctaaattt agggattatt atttaaattt
    38161 taatattgat ttaagtaaag tcatttttat agcaacggca aatgatatta gcaatattcc
    38221 tgcaccttta agagatagaa tggaatttat agaacttagc tcttatactc caagtgaaaa
    38281 atttcatata atgaaaaaat atttaattcc agatgagctt aaaaaacatg gcttaaaatc
    38341 caatgaatta tttattgatg atgaaactat agagctaatc attagcgatt atactcgtga
    38401 atcaggagtt agaaatttgc gtcgcaaagt ggcagagttg tgtcgtaaga gtgctaaaaa
    38461 actactttta gaaaatatta aaaaagtcat tattaataca aaaaatttga atgaattttt
    38521 agataaaaaa gtttttgaaa tagaaaaaaa taatggagaa aatcaagtag gtcaggtcaa
    38581 tggtttggct tggacaagcg taggtggaga tgttttaaaa gtagaggctg taaaaattaa
    38641 aggtaaagga gaattaacgc tcacaggaag tttgggtgat gtaatgaaag aatcagctag
    38701 aattgctttt agcatgataa aagttttaat cgatgaagga aaaataaaaa tacctaaaaa
    38761 aataattatt gatcctaaag ttaatgttta tgatagttat aatattcata tacatgtgcc
    38821 agatggagct actccaaaag atggcccaag tgcaggtatt acgataagca cagctattgc
    38881 ttctattttt agtgataaaa aggttaaagc agatgttgca atgacgggtg aaatagattt
    38941 aaaaggaaaa gttttaccaa taggcggatt aaaagaaaaa ttaattgcag cttataaagc
    39001 agatataaaa acagctttaa ttccaagaaa aaattacgaa agagatttaa aagatattcc
    39061 tagtgaggtt agagacaata tggaaatcat tgctgttgat actttcagtg atgttttaga
    39121 atatactttg gtttaacttt attttgagaa taaatgtata agaaagcaaa ctttttacaa
    39181 gtttgcttta aaagattata gtccttcaaa aggattattg attacttctt ttctatccac
    39241 tatataaggg ataagagcta catgtcttgc acgtttgatt gcaacttcta ccatttcttg
    39301 gtattttttg cttgtgcctg ttaaacggcg tggcatgatt ttaaatcttt cagataaagc
    39361 atgttttaac attgctgtat ctttataatc aataaattca acttttgctt cagtgtattt
    39421 gcaatatttg cgagagtatt ttcttttttc tgccatagtt tatcctttaa aatggtaaat
    39481 tagtatcatc gctatcataa gcatcgatat caatttcttt taatttttct tcgtgttgtg
    39541 ggttttggtt tctttgtgga gtagggtttg cttttgcttt attaaaattt tgattttcac
    39601 tcatataagg atcatagctt tgattttcat agtttccact ataattgttg tttgaaaagc
    39661 tattattgcc aaaaccacct tgttgtggag cattggaatt gccaagcatt tccatatttt
    39721 caacttgaat gctatgttta gagcgatttt gtccattttg atcactccat tgttcaaatc
    39781 tcaaacgtcc ttctatgagt acttttgaac cttttgtaag gtattggttt gcaacttctg
    39841 cggtgcgacc ataaaagctt atatcaataa agcaagtttc ttctcttttt tctccatttg
    39901 cggtaaatct tcttgttact gctatagcgg aagctccaat agcactaccg ctttgtgcat
    39961 aacgcatttc tatatcacgt gtaagatttc caaccaaaac aactttgtta aacatctttt
    40021 tccttattga atttcaggag catctaaagg tttaatttct tttttagatt gcttaatccc
    40081 gtggcttagt ttttcccaag ctgcaatttc ttttttattt tcatatttta cgattaaaaa
    40141 tcttattact tcttcagtga ttcttaacac cctttcaagc tcagcgatca agtttgtagg
    40201 agctttgaaa taaatcacaa aataagttcc tctttcgtat tttttgattt tatacgctaa
    40261 ttttctagta cccattggaa caacagtttc aatttctgca ctatttttgg ttaggacttc
    40321 tttaacgaat tccaacttcg cattcacttc ctcttcagta agtgttggtt ttaagataaa
    40381 taaaacctca taatgtttca tcttttctcc ttatggatat taaagcccat ttttatgagc
    40441 aaggattttg cataaagcaa gactagatta tatcaaaata tacttaatta gtcttgaata
    40501 cttaaggttt tatctaaatt tgttttgatt tcttcaagca tagcaaaacg ttttttatac
    40561 atggagcgtt tttgcgaagg gatttcttct aggttttttt gagagtggtg gagtttatag
    40621 tatttgtgtt tattgatttt tattaattct ccaccatttt ctagccaaat tttttgataa
    40681 tctacaaaat agcctttttc ttttcctttt tgagaacgga tttgattttt ttcatgtaca
    40741 cctaaagtag tttgaagttt taaaatttca caaagcatct tagagcattc tataagtaaa
    40801 gcaacagggc gcaaaccatg acatttttta gttaaaattt tattaatttc taaaatatta
    40861 aaatctttgt atttatgtcc ttgtatacaa gaaagtagaa gattgttttc taaagtaaag
    40921 caaaaattac attgtaagat tgtgtatttt ttaaatttta aagaaaaagc ccaaaaacct
    40981 tcttcgcaaa cattatagtt atatcctaaa aaaagctcaa aatcttcatc aaaagaaaaa
    41041 attatttgct cctcgggaag aaatttaaaa caagcgagtc ccttatcaac atcataaata
    41101 agtgttttaa cacgttcatt tgctttaaaa cttttatcgc aaaatcttct tgtagcattg
    41161 taacaagcat agggtctttg agagaaaaag tcttttaaat gtttattttt ttctttatta
    41221 agcgtttttt ctagaagtct tacttgagga aaatataaaa tttttcttgc ttgaaaacgc
    41281 aaatagcgcc aaaagattat actttttctt ctatcagtaa aatttggaat agggtaggaa
    41341 aattttttat tcacctataa tccttgatat atcattataa gttgcaaaga gcattaaact
    41401 taaaagtatt gccatgcctg tatagcttaa atattcaaaa gtacgctgtg gaactttgcg
    41461 tctaaaaatc atttcataaa gattaaaaag tatatgtcct ccatcaagca taggaatagg
    41521 taaaagattt aaaatgccta aatttataga aattaaagca gtgataaata aaagcaaagt
    41581 aaagctattt tgtgcagcct ttgaggtaat ttcagtcatg gtgataatac cgcctaaatt
    41641 ttttgcttca acttcaccac ttatgagttt tacaataccc ttgatgatga gtgtagaagc
    41701 ttgaaaactt tcttgtgcgg catatttaaa actttctaaa ccttggtgtt ttacaagagt
    41761 gcttgtccca tttggactga ctccaagttg aggtttttca acgatttgtc caaagtcatt
    41821 gtatccttgt cctatttttg gagttaaaat aaattctaaa ttttttcctt ctctattgat
    41881 taatattttc aaaggatcta aacttaaatg ctttgaaatt tcatcaaagg tttgaattct
    41941 tataccgtta atttctaaga tagtatcatt tttttgaagt cctatttctt gtgcagcaga
    42001 gtttgacgct atgtttccta tttgcggagc aagtttgttt agacctaaat ttcctatgat
    42061 aatataaaga aaaaaagcta aaattagatt aaaaaatggt ccagcaaaaa gaatataaat
    42121 cttttttaaa ggacttaaaa tgctatagct atctttgtct agattttcaa aaccaggacg
    42181 catatcatct tgtcctttaa gtttaacata tcctccaagt ggtaaagtgc ttaagcgata
    42241 gtttgtgcct ttaaattcac gctctataag actttttcca aatcctatac taaaaacttc
    42301 aacttttaca cccaaagatc ttgcagccaa aaaatgtcct aattcgtgaa agaaaattaa
    42361 aaatgagatg actaaaacag ttgctaaaaa ttcaatagaa taaaatttaa ttcccaaaat
    42421 caaaataaca attaaaaata ataaagatct catttttctc cttttttttg agcttttata
    42481 taagtataga tgtattcaaa tccagaataa agagttaaaa tcaaagctat gtaaagtaga
    42541 atttcaccgc ctatccactc catgattaaa aatcctatcg cagtcatttg aaaagcggtt
    42601 ttaagtttgc ctgcaaaaga agcattgaca tttaaatttt cgctaatcat tacaactcta
    42661 aaacctgtga taaaaaattc ccttactaat ataatataaa ttacccattc attagctttt
    42721 cctgtaagta aaagccctaa aaaagctgct aaaacaagca ttttatcggc taatggatct
    42781 aagattccac ccagttttgt agtttgtttc caagttcttg cgatgtatcc atcaaaaaaa
    42841 tcacttaaag ctgctaatga aaaagttaaa gcagcaaaat agttaatcca actttgatga
    42901 atattttcaa aatgatgaat taataaaaaa aatagcaaag gcgctaaaac cattctaaaa
    42961 atcgccaaga tattgggtaa attcataaca agccttgtga aattaaatgt aaaattataa
    43021 tcaaaattgt ataaaattta agcaaagact tagtaaaaat acaaaaaaag aatcagttta
    43081 tttttattta aattttgctt aaaagcaaaa tttaaataaa ttttacaact tcatcaaaac
    43141 taaaacgatt tttttgagga tttttttcat cgttgcaata tcctaaagct accaccaaac
    43201 ttgatctttc tttttgaata ttaagtgata aataagaatc aagcttttct ttatcaaaac
    43261 cacctatagt gcaacttgct atatttaaag cattagcact gtaaagtatg ctagctagag
    43321 ctatatgagc ttgttctctt gcataagata ttttttgttc ttgattcaga gattttaaaa
    43381 aaggcatata agcatctaag cgtttttgaa tttctgtttc actcatatct ctttttctaa
    43441 gtttttcttc aaaataatct aaaaaatcaa gtcttgaaat gatgataatt aatgcagcgc
    43501 aatcttttac atgtttttgt tggttgcaaa ttttagaaag ttcttctttt cttttctcat
    43561 cttgcattac tataaatttc caaggttcca gtcctaagga actggggctt aatcttgtta
    43621 tttctaaaat agaatttaaa tcctcttttt tgagtttttc atttttaaaa tttctacaag
    43681 aatatcttgt gctaaaaatt tcaagttctt ttttcattat ttttccttgt aaaattcgac
    43741 gacttcatta aaatttaagc gttgagtaga atattttggt tcgtgggctt tatatcctaa
    43801 ggataaaatt acggcagttt caaaaggata agttaaatta agaaaatcat caaccttagc
    43861 tttttcaaag ccacctatca tgcaagaatc aatacctaag ctcattgcag ctagtgacat
    43921 ttgcatcata gcaagatagc attgaagttg tgcataatga tagagttcat tatcattcat
    43981 tgcattggtt ttatgagtat aaatttctaa aattttttga aaattttctt cgctagaacc
    44041 tgagaaacga cgcacttgtt tttgtgcaaa ttcatctttg ctttgaagat cttttcttgc
    44101 tagaaaaata atattatgac ttgcacttgc tacattttgt tgattgtaac atagggttga
    44161 gagtttaaga ttgtgttctt tttgttctaa tactacaaat ttccaaggct caaatccatg
    44221 tgagcttggg gctaagactc cactttctaa gataaaatgc aaatcctttt cattgatttt
    44281 tttatcatta aaaagtttac aagctctgcg ttttgaaatt agttctttaa aattcatttt
    44341 attccttaaa atcaaaaata ataatattaa ttataaaatg caaagcttaa tcaaaaaata
    44401 ttatagtttg atatttttct taaaaacaaa accggatttt tcaaaaccca ttttttggat
    44461 ataaaattca tgagcttgtg ttctaaaaaa acttgaactt agttctaatt cttcatatcc
    44521 ttgatctttt gcccaaattt ggattttttt caaaaaagct tgacctatac cttttcctct
    44581 taaagcttca tctacgacaa aatcacaaat ataaagacaa tgattatgat aaagtacatt
    44641 aaagggcatg actccacaag ctgctttgta gcttccctca ttttcatagg caaaaagttt
    44701 ataatgttga gtttgtgtag caagttggat tttgtctaaa aaatctttca aagataggtt
    44761 atttcttaat tgttttatca agggataaat tttttccaag tcttctttta gcttaatttc
    44821 tttcattttt aaatccctta aatttcaaaa atttcaggtt ttaattttaa aagtaagcaa
    44881 aaagttgcca aaacagcttg ttcttgcata aattcacgat ctccatctaa ataaagcgtt
    44941 tcttggataa aagttccatc tctaaacatt gcacctatat aaatagtgcc tgattttatt
    45001 tttccctcat ctttttcgcc aactactccg ctaacagcta aggcaaaatc aggattagct
    45061 gttttaaaaa taccttttag cataaaataa acacaacgtt cactgtattc gccattattt
    45121 tctaagacgc tttcgctaat tccaagccat tcgtgtttga tgcggttgga ataacttaca
    45181 atagaacctt caaaaatttc acttacacct gaaattttgg ttaaggtact tgcacaaagt
    45241 ccacctgtgc aactttcagc aaaagaaatt tttaattttt tttctaaaag tttagagctt
    45301 ataaaatgta tgggatcttt acctaaaaat accttttgtc caaaaagatt ttttacgcta
    45361 tttaaaaaac catcaagttt tccaaaatta gcgcaagtgg ccttaataag cacaagatta
    45421 tctaaaagct tggttgattt tatacttatc tcataagatt ttgttagggt ttgcagtagc
    45481 aatatagcgc tttcatcatc catgccaaaa atgcaaaaat atgcaaaatt taattttata
    45541 tgcccaagaa gattgggtaa tttttcgctt ggatttattt taacgacatt aatttttgaa
    45601 tttgaaaaat tacacacaaa gctattttta ctaaattctg ctttatctgg aaccaaggta
    45661 tcatctttta agataagatt atcatcattt aaagttgcta aaattttagc aacagtcgca
    45721 taatgtaaag agcttgtaaa taaagtgata aaatcatact gatttaagag attttcaagt
    45781 aaaaaaggta aatctttatc ggttttattt tgtatgcgaa tttcgttgat ttctttaaat
    45841 ttttcttcat aagttctata aatataattt ttgaattttt cgtttatagt aagctcatct
    45901 cctataagat aaagcaaatg tttcataaat tttccttttt ttcttataat tatagccaaa
    45961 aacaaagtag aaattaaagc taatttgagt agaatttaag attattaaaa attaggtgga
    46021 aaaaatggac tacaaagaaa ctctactttt gcccagtact agttttgcta tgcgggcgaa
    46081 tttagcggaa cttgaaccgc aaagatttaa aaaatggttt gagcaaaatt atgcttatga
    46141 aaaaatgaaa gaaaatcgca aaaatgcgaa aaaaagtttt accttacacg atggcccccc
    46201 ttatgctaac ggacatatcc atataggaca tgctttaaat aaaattttaa aagaaactat
    46261 tatcaaaacg cattatttta aaggtgagag tgtgcgtttt actccagggt gggattgtca
    46321 tggtttgcct atagaacaac aagtagaagt aaagcttgga gaaaagaaaa aaagcttaag
    46381 taaaaaagaa attcgtgagt tttgcagaca acatgcgagt gaatttgtag atatccaaag
    46441 agaagaattt aaaaatttag gcattattgc agattgggat aagccttatt taactatgaa
    46501 atttgagttt gaagcagcga tttatagaac tttatgcgag attgctaaaa aaggcttact
    46561 ttgcgagcgt tctaagcctg ttttttggag ttgggcggca aagtcagctt tagcggaagc
    46621 tgaagtagag tatcaagata aagaagatta ttctatcttt gtggcttttg atttagatgt
    46681 aaaagcttgc gaaaaattag gcgtttcaaa agcaagcgca gtgatatgga caactacgcc
    46741 ttggactttg gtggctaatc aagctatagc tttaaatcct aatgaaaatt atgtgatcac
    46801 caaagagggt ttgatttttg caagtgcttt acttaaaagt atggtagaaa aaggacttac
    46861 aagtggagaa attcaaaaag aactaaacgc aaaagaattt gaaaaacttg aagctatcaa
    46921 tcctttaaat ggaagaaaat ctgttttaat tatgggcgag catgtattga tggatggtgg
    46981 aagtggactt gtacatactg caccaggaca tggcgaagat gattattatg cttgtttgaa
    47041 atatggcatt gaggttttaa tgcctgttga tgatagtgga tgttatgatg aaactttaag
    47101 agctaaaggg cttttgcctt ctcatttgct tgaagagttt ataggtcttc atatttttaa
    47161 ggccaatgaa aaaattttag aacttttagg cgaaaaactg ttacattctt ctaaatttat
    47221 acactcttat ccattttgtt ggagaacgca taagcctgtg atttatagag ctactaaaca
    47281 atggtttatt ttaatggatg aaccaaaact tcaaggaaaa actttaagag agtgtgcaaa
    47341 agaacaactt ttaaaaacaa ccttttatcc gcaaagtggg gtaaaaagaa taggttctat
    47401 ggtggaaaat cgcccagatt ggtgtatttc aagacaaaga gactggggaa cgcctatagc
    47461 cttttttaga gataaaaaca ctaaagaagt gatttttgat gatgagtttt ttgactttgt
    47521 agcagctatc tttgaaaaac atggcgctga tgcgtggtgg gagtttgaaa tcaaagattt
    47581 aattcctaca aattcaaaat acaacgctga aaatttagaa aaagtatatg atattttaga
    47641 tgtttggttt gatagtggaa gtacttttaa tgcggtttta aatagcggac tttatgacac
    47701 aggagaaaaa agagcaagta tgtatttaga aggaagcgat caacatcggg gttggtttca
    47761 aagctctttg cttgtaggta cagcgatcaa tgaaagtgca ccttatgaaa gcattttaac
    47821 tcatggtttt accaccgatg aaaaagggca aaaaatgtct aaatctaaag gcaatgtgat
    47881 tgctcctgaa tatgtagcaa aaacctatgg agttgaaatt ttaagacttt ggatactttt
    47941 aagtgattat tcaagtgatt taaaaatttc agacaatatc ttaaaacaag taggcgaaca
    48001 ataccgcaaa ataagaaaca ctataagatt tttacttgcc aataccaatg atttaaaaga
    48061 tttaaaagtt aaagaattta gttttattga taaatggata ttaagccgtg caactaaagt
    48121 ttttaaagca agcaaagagg cattttttgc ttatgaattt gctaaaggtt ttagtttgct
    48181 tttaaatttc ttaagtgcgg atttaagtgg gatttatctt gatatcagta aagatagact
    48241 ttattgtgat agcgaaaatg cccaaagaag aaaatctgct caagtggcta tggctttgat
    48301 agcaaaagag cttttaaatt tacttgctcc aaatttaagc tatagtgtag atgaggcttt
    48361 agaacatgct aatgttttaa tcaaaggtga tgcaaaagat gtatttgatc taagtttaac
    48421 tcaggatttt gattatgatt ttggtataga tgatacattt ttaatgagtg ctagagagaa
    48481 attttttgaa cagattgata tacttaaaaa agataaaatc attaaatcta ctttggaatt
    48541 aaatttaaac atcagtttta ataaattccc aaatgaggaa ttagccgatt ggtttatggt
    48601 aagtcaaatc agcaatgaaa atgaagaaat tttggctgaa tttgaagtag agaatgagaa
    48661 atttaaaatc accaaagctt cactttgtaa atgcccaaga tgttggaaac ttcaaagtaa
    48721 agatgaagaa acaccttgtt taagatgtga agaagtttta aaagggattc aatgctagaa
    48781 aatcctattc caaatagcat tatcatcaca actatagcgg tggttttggc ttttagtgct
    48841 ttagcagtat ttttgatcaa aaaaacaaag gaaaataaat gataacttta aaagaagctt
    48901 taaaatactc caaagaagaa cttgaaaatt taaaaaaaga actcaatgaa aaagcaaaaa
    48961 aagaaaaaaa aataggtgct tatatcgaac aatttttaga taaagactta agtgtttcag
    49021 gtgaaggtgt gcctgtagct ataaaagata atatcagcgt aaagggctgg gagcttacta
    49081 gtgcgagtaa gattttacaa ggttatatcg ctccttatga tgcaagtgtg attgttaatt
    49141 taaaagctaa tggtttttct ccttttgggc gttgcaatat ggatgaattt gctatgggaa
    49201 gttcaacagc gagttcttat tatggcaaaa ctttaaatcc tttaaatttt gagcgtgtgc
    49261 caggtggttc aagtggtgga agtgctgctg cggtagcggg tggcttggct ttggcaagtt
    49321 tgggttctga tacaggagga tctgtacgtc agcctgcagc tttttgtggt tgcgtaggat
    49381 ttaaaccgag ttatggaaga gtgagtcgct atggcttagc ttcttattct tcaagtttgg
    49441 atcaaattgg ggttttaacg caaaatgtag aagatgcggc aattttatat gatgcgatcg
    49501 caggatatga taaaatggat agcacgagtg caaatatcga gtttatcaaa accgctccaa
    49561 atttaaatgc aaataaaaaa ttaaaaattg cagtgattga aaattatgtc aatgatgcag
    49621 atagtgaagt aaaaaacgca cttttaaaaa ccatagatat gttaaaagct aatggacatg
    49681 agattgtata taaaaatttg cttgattcta agtttgatat cgcagcgtat tatatcatcg
    49741 caacagctga agcaagtgca aatttaagtc gttatgatgg ggtgcgttat ggcaagcgtt
    49801 ctgaaaatat ccaaaattta aaagaaatgt atgtaaatac acgcagcgaa ggttttggag
    49861 aagaagtaaa aagaagaatt ttgttaggaa cttttgtttt aagcagtgga tattatgatg
    49921 cgtattatat taaagcacaa aaagctagag cttttattaa ggtaaaatat gaagaaattt
    49981 tgcaagattg tgatcttatt tttatgcctg taacgcctac aacggctttt aaatttgata
    50041 ctcaaaaaag ccctatgcaa acttatttag aagatgttta tactatctct gtaaatttag
    50101 caggacttgg aggcattagt gtgcctgttg caaaagataa agaagggctt aatatatcag
    50161 cacaactgat ttgcaaagct tatgatgaac aaaccttgtt agatggggct ttaagtttag
    50221 aacaaatgat taaacattaa ggatgaaaga tgaaaattgt aaaaagagct ttaacttttg
    50281 aagatgtatt attgcgtcct gggtattctg aagttttacc taaggaagta aaaattcaca
    50341 ctaaattaac aaaaaatatc actttaaata tgcctttaat ctctgcggct atggatacag
    50401 ttactgaaca cagggctgct attatgatgg caagacttgg agggcttgga gtgattcata
    50461 aaaacatgga tatagcctca caggttagag aagtaaaaag agtgaaaaaa agcgaaagcg
    50521 gggtgattat cgatcctatt tttgtaagtc ctaaggcaag tgttgcggaa gctttagaaa
    50581 ttatggcaga gtatagaatt tcaggtgttc ctgtagtaga tgaagataag aaactaatag
    50641 gcatactcac caatcgtgat ttaagatttg agagtgattt ttcaaatttg gttgaaaatg
    50701 ttatgactaa aatgccttta attactgctc caaagggttg tactttagat gatgcggaaa
    50761 aaattttcag caccaacaaa gtagaaaaac ttcctatagt tgatgaacaa ggacgcttgg
    50821 aaggacttat cactataaaa gatcttaaaa aacgcaaaga atatcctgat gccaataaag
    50881 ataattttgg aagattacgc gtgggtgcgg ctataggagt agggcaaatg gatcgtgtga
    50941 atgctttagt tgaagcaggc gttgatgttg ttgtgcttga ttctgcgcat gggcattcta
    51001 agggtattat tgatacagta aaagcaatta aggctaaata tccaaattta gatcttatcg
    51061 caggaaatat cgccactgca gctgcagcaa aagcactttg tgaagcagga gtagatgcgg
    51121 ttaaagtagg tattgggcca ggaagtattt gtactacacg tattgtttca ggtgtgggcg
    51181 tgcctcaaat ttcagccatt gatgagtgcg tggaagaagc aaataaattt ggcgttcctg
    51241 tgatagctga tggcgggatt aaatattcag gtgatatcgc aaaagcttta gctgtaggtg
    51301 cgagttctgt tatgatagga tcgcttttag ctggaacgga tgagagtcca ggagagcttt
    51361 ttacttatca aggaagacaa tataagtctt atcgtggtat gggctcactt ggggctatgc
    51421 aaaagggaag ttcggataga tattttcagc aaggtactgc tcaagataaa ctcgttcctg
    51481 aaggtataga agggcgtgtt ccttatgtgg gaagtataag aagcgtggtg catcaacttt
    51541 taggaggttt gcgttcttct atgggttatg ttggggctaa agatatagaa gattttcaaa
    51601 aaagagccga atttgttgaa attaccactg cagggcttaa agaaagtcac gtgcatgatg
    51661 ttactatcac tcatgaagca ccaaactaca aggttaatca tcaatgagtt ttgaagaaaa
    51721 tttaaaacac gctaatgaat ctttggaaaa attaaataat caagagcttg ccttagatga
    51781 aagtgtaaaa atttataaag aaggtttaga gagtatcaaa aaagcaagac ttgagcttga
    51841 aaaagcaaaa ttagaagtgg agcaaatcga tgagtaaaat agcagcttta cagtttccaa
    51901 ctttagcttt aagtgaatca aggcttgatt attatcttaa agcttcaaaa gacaatggag
    51961 taaatttagt agttttggga gaatatgtga tcaacagttt ttttacagaa cttttgcata
    52021 tgccaaaaaa tatgataaaa gaacaaagcg aagctaaaaa agaaagcttg attaaacttg
    52081 ctaaaaaata cgaattagaa attatcgctc cttatgtaag cgttgaagct aaaagttata
    52141 aaaaactttg cttaaaagtt actccaaatg gtgtgaaaag ttatgaacag caaattttaa
    52201 tgccttatga acattggaat gaagaaaaat ttttcagcaa caaaactcca tcagaattaa
    52261 aaatttttac ttttaattat gaaaaattaa aatgtgcttt gctttttggt tttgagacac
    52321 attttgatat tttttggcaa cagattatgg cgaaaaaaat tgatttggtt atcgttccta
    52381 gtgcttgtac ctttgaaagc aaacaaagat gggaagaact tttaaaaaca agagcttttt
    52441 taaattctac aagcatttta agagtaaatc gcataggcaa aacaaaagat gagtggaatt
    52501 tttacggcga tactttgttt attaatgctt ttggtgagat agaaagtaaa ttgggttctg
    52561 aagaagaaat gcttattata gagcctaaaa aaagtgatga agcaagaaaa ctttggggtt
    52621 ttgataagat aataaaagaa tttaaaaatt aaatttatac ttatagattt ataagtttat
    52681 aaaagttatc tagagctgat agaagctaag gtttatattt tctttttagt aaaaaagtgc
    52741 taaaatttag cctttaaagt ataaaggttt aaatgatgca aaatatccat tttatcggca
    52801 taggcggtat aggaatttcc gctttagcaa gatttttaaa agaaaaaggt tttaaaatta
    52861 gcggaagtga tcttaaagag agtaaaatca ctaaagaact agaaaaagaa ggggttaagg
    52921 tcagtatccc tcatcataaa gacaatattt taaacaaaga tttagttatt tattctgctg
    52981 ctatcaaaga agaaaatcct gaatttaaac acgctaaaga attaggcatt aaatgccttt
    53041 cacgcaagga ggccttacct cttatcttag aagataagcg cgtttttgca gttgcaggag
    53101 cacatggaaa aagcacaact tcaagtattt tggcttcttt gcttggtgat gcttctgtga
    53161 tcatcggagc gattttaaaa gaatttggtt caaatatgat ttataaagaa agccaaaacc
    53221 ttgtttttga agctgatgag agcgatagtt cttttttaaa ttcaaatcct tatttggcta
    53281 tagttactaa tgcagaagca gagcatttag atcattatgg caatgaagtt tcaaaactcc
    53341 atcatgctta tgcggagttt ttagatacgg ctaaaattcg cgtgattaat gctgaagatg
    53401 agtttttgaa aaattataaa aatgagtcaa ccaagcttta tccgagcaaa gatatcaaaa
    53461 actgcaccat gcgtatagaa aatttcaaac cttttacaag ctttgagttg aaaaatttag
    53521 gtgaatttaa ggtttttggc atgggatatc atttagccct tgatgcgtct ttggcgattt
    53581 tggcggcttt aaatttctta gatatagaaa cgataagaac taggcttaaa aattatcaag
    53641 gtattaaaaa gcgttttgat attttacatg ctgatgaaaa tttggtttta atcgatgatt
    53701 atggtcatca tcccaccgaa ataaaagcga ctttaagtgc agcacaacaa tacgcaaaat
    53761 taggcggata taagaaaatc acagctatct ttgaacccca ccgctacacg cgtttggctg
    53821 caaatttaaa ggaatttgca aaggcttttg aaggtgtaga cgagcttata attttacctg
    53881 tttatactgc aggagaagag cctatagggc ttgatttaga agcggttttt cctaaggctt
    53941 tatttgtaga agatatcaaa agagagggta aatttttggt agcttctaag gggcaagttt
    54001 ttgaagaagg gcttattata ggttttggtg caggagatat cagtaataaa ttaaggcaaa
    54061 aaaatgagta ggtttttttt atatttttta attattttaa ttttagcctt aatcactttt
    54121 gctttgcgtg aaaaattagg caaaaaaact aaaccttttt ttggtatttt acttgtgatt
    54181 tttattgttt tagcggtatt ttttgaattt gaaaacacgc aaaaaagtca tttaagaaca
    54241 gatattatcg tagcttttaa tcaaaataaa aatattttat gtaaagatat caatgtttct
    54301 aaggcgtatt ttaattatga atttggtaca ggaagtttta tttcaaagga taataatcaa
    54361 agttttaatt ctttaatcat agatattaaa gattgtaggt taaatgatga atgatacaaa
    54421 agaagaattg atctcaaagc ttgatttaaa cagctattta gaagagttta aagccctttt
    54481 tgcaagagat aaggagattt ttttgcaagg agattctaat cttcatttta aacgtataca
    54541 tgagctttgc gaggtggaat ttcctactat accagagctt agcaatcttg ataaagcctt
    54601 ggttcattta agtaagcaag gaattttgca tttagatgaa atttttgaat ttgtaaaaat
    54661 ttttcgttat tttgaaaagt taaaaaaaat aaaactagga acaaatttag actcttggct
    54721 acaaaagata gaatttgtta gcggggcttt ggagctttgt ttgaatttcg atgaaaaagg
    54781 ggagttaaaa gaaagtttag atgaaagact tgtaaatctt aatgccgctc taagattaaa
    54841 aaatgaaagc ataatagctg agtttaagaa attttgctat acaaaagctt taatgcctta
    54901 tcttatcgat acacaaatcc atcttataaa caatcttgaa gccttgcttg taagaggcgg
    54961 gtttaatcac gctattaaag caaaaatcat aggcagaagt aatggcggtg gcttttatat
    55021 cgtgccttta agtgttgaaa atttgcaaaa tgatatagaa aaaatcaaaa atcaaaaaga
    55081 agaaatttat tatgaatacg ctaaaaattt ctcagctttt ttagtaaaaa atctaccttt
    55141 tttaaaattt atcaatacag cctttgatct ttttgatcat tatagtgcta gggttttgct
    55201 tgctaaaaaa agggattttg aatttgtttt gtgtgatcaa agtacggatt tagtgcttaa
    55261 aaattttgct catcctgcct taaaaaatcc aaaaagcgtg agtttggaat ttaaaaaaca
    55321 agttttaatc atcacagggg taaatgcagg cggaaaatcc atgcttttaa aatccatgct
    55381 aagcgcagca tttttagcta aacatctttt gcctatgcat ataaaagcaa gtgaaagtaa
    55441 aatcggtact tttaaagaat ttgatgccat catagaagat ccgcaaaatg ttaaaaacga
    55501 catttcaact tttgcaggaa gaatgttgca tttttctaga cttttttcta ggaaaaattt
    55561 gcttttaggt atcgatgaaa tagagcttgg aacagatttt gaagaagcgg cttgtttgta
    55621 tagtgtgtta atttcaaaac tcatagctaa taatcttaaa atcatcatta ctacacacca
    55681 caaacgcctt gccatgcttt tagcaaagaa tgagcaagtt gaactcatcg ctgccttata
    55741 tgatgaagag ctttcacgcc caaaatacga gtttttaaaa ggcaccatag gaaaatctta
    55801 tgcctttgaa accgctttgc gttatcagat tccgccgaat ttagttagcg aggctaaaaa
    55861 gctttatggc gaggataaag aaaatttaga agagcttgtg ggtaaaaata tcaatcttga
    55921 attagaacta aaagctaagc ttgaaaatgt cgagaaaaaa gagcaaaaag tcgatgaaat
    55981 tttactttcc ttaaaagagc aaaaagaaaa aaatgaacaa gaatttcgta cgagtttgag
    56041 aaatttagaa tttaaatttc acaaagccat agaagaagct aaaaaaacca tacagcttaa
    56101 agatataaaa gacaagcaaa gaagtcttaa taaagccaat gaacttaaaa aagaaatcat
    56161 cttgccaagt atggagcaaa acgaagaatt gcgtgtgggg gattttgtaa aatatgaaaa
    56221 aattaagggt aaaatcataa gcatttctaa aaacgatgct atggttgaaa gtgatgggat
    56281 caaacttcgt gtgcctttaa aactgcttaa aaaaagcact cctacatcta aaataagtcc
    56341 aaaaacaagc attagtgtgg caaaaccgac taatcttagt gttagcttgg atttgcacgg
    56401 gcttaggagt gatgaagcta tttcaaggct tgataaattt atttcagatg ctttgcttgc
    56461 aggctttgat gaagttttag tttaccatgg tataggagca ggaaagcttg cctttgctgt
    56521 aagagagttt ttgaaaactc ataaaagtgt caagggcttt aatgacgcac cgatcaatca
    56581 aggtggcttt ggtgctaagg tggtaagatt ataaggaaat aaatgattac aaaagataat
    56641 ttaaaacaag ttttagaaaa cttaggcttt aaaaataaaa atgaaaatta tgtaaaaaca
    56701 atcaataatt acactctttt aatagattat aaaaaccaaa gtattaatta tccaaaagaa
    56761 ataaaaattc acgataaaac tacttctaat ttttcacacc ctgaaaattt tgtagttttt
    56821 gaatgtgtgc atagactttt agaaaaaggt tataaggctg aacatttaga gttagagcca
    56881 aaatggaatc ttggcaggga taaaaaaggt ggtaaggctg atattttagt aaaggataat
    56941 gaaaacaatc cttatttgat tatagaatgt aaaaccacag attctaaaaa tagtgaattt
    57001 ataaaagaat ggaatagaat gcaagaagat ggcggacagc ttttttctta ttttcagcaa
    57061 gaaaaaggtg taaaatatct ttgtctttat acaagtgatt ttagcgataa gttagaatat
    57121 aaaaattaca tcatacaagc ttacgataac gaagaatatc taaaagaaaa ggaattgcaa
    57181 aattcttata aaaaatctaa taacaatata gaacttttta aaacttggaa agaaagttat
    57241 gaactgcaat attttaaaca aggtattttt gaagcaaatg tcaatgccta taaaatttta
    57301 gaaattactc caacttttga taatcttaaa gaacttaaag aagaaggcaa atatcacgaa
    57361 tttgcaaaaa ttttacgcaa gcataatata tcaggcaagg aaaatgcctt tgataaactt
    57421 gtaaatattt ttctttgcaa aatttatgat gaaactttta ataaaaacaa tctcaaattt
    57481 ggatattttg gtgtaatggc agatacttat gcaaatatgc aagatagatt aatgtggctt
    57541 tataaagaag ctatgaaaga attcttagga gagaaaatta cctttgtatc taatgaagat
    57601 atagaaaaag actttaagca attaaagata aaaactgtcg gcggaaaaat aaaatgtaac
    57661 catagaaaaa taaaatgata ctttttggtt gcattttatt tttccataaa acttaaactt
    57721 aaaatgtaat tatattattt cttttacttt gtttttccaa aaatcaacaa attttctatc
    57781 aattttagga tttgcctcag cttcttttat taaatcattt atacaatcaa ttcttttttg
    57841 tttggattta atagttttta atttcccagc ttcttcataa tacttaatac attgattttc
    57901 aaaaagactt acatcataat tatcttccaa aagttgaatt gtatctacaa ttaagccata
    57961 ggctttggga tgtctttcct gtattttttg ttccatttct aatgcaagtt ttcttctgct
    58021 ttctgcagta tctttatttt ttgattttaa agctatgcta acactttctt ctgcgattaa
    58081 gataaaattt attgcttcta aataattatc ttgattattt gaagagagat aatgtgaaat
    58141 tttttcatgt ttatttgtag aaaaattttt acactgctca tataattctc gataaggtct
    58201 ttctaatctt aaaatcattt cttctgtaat catggcttta ccataatgaa ttttagctgc
    58261 ttccattaaa gaaatttcat aatatttaga tattgcttct atttctttta aatcttgttt
    58321 agtaagagtg ccgtttgttg ctatttttat taattttgat tttattctaa aaccagaata
    58381 aacaaataaa ccaattgttg caatcaatat tataataata aaatataaca tcactcgtac
    58441 tttataatag cattttcaaa agttttaatt gatattgcct tacaaacaac gcctataatt
    58501 tcagcgttgt taatatgctc aatattaaca acaatatctt tgtaaaaaga gttcatagaa
    58561 cttaatacaa tttcatttac aaatggttgt tttaaaagct ttttacagta aatttcgcca
    58621 tcaaggttga taaccacaat atctccattt ttaacaaggt caagtttatt tttgctcaca
    58681 tcaatagcta taacatctcc actatggata aaaggctcca tactatctcc tataacttta
    58741 ataatatcga gtttagctaa aggcggtaat cctaaggctt cgcaggcaaa ttttttactt
    58801 attgctatct cagtatattc taattgacta tttatagcac catatccagc ggcggctgcc
    58861 gcatctgtat aatatcttaa tttcaaaata tcatctataa ttcgcatttt gtcaaaaaag
    58921 atagcatcaa gtgaaatatt gtgttctttt gaaattttca ttaataaatc gtagggaatg
    58981 gtatttctag ttctccaagt gcttaatgta ttgggtttta ctttaaaaat tccacaaaat
    59041 tctttatcat cggtgatatt taacagagca taaactctat tcaaaatgtc tgctgtttta
    59101 tgcattataa gccttctttt attaaaaaat tcacaaaatg cgataaaata tcttgactta
    59161 attcgcattt tgtcttataa tttgatattt taatagcaaa ttgtatctta aaataactca
    59221 atttgatata aaaatatcaa attaaaggaa aaaaatgtta aaacaatact tcgaagataa
    59281 tggtattaat ataaaaaaat tcgcacaaaa acacaatctt gactatttaa gtactattcg
    59341 cgttataaaa ggtgaatatt taggaaaata caaagcgaag aaaaacacta gagcagttta
    59401 tgaaaaactt ttagaactta aaatcattga tgaaatgcct aaggcttgtt catgagttac
    59461 ttcttagaaa ccaaagaagc cgcacaaact tttaatgtaa gcacaggagc tttgaggctt
    59521 gcagtaagta gaaactcaaa taaatatgag tggctaaaag tggataatga aaaaggtggc
    59581 aggggtggta aaaaactact atttaaaata agcaaagatg agcttttaac cgcttttaat
    59641 caagaattaa tcagtaaaaa tactttgatt tttaatgaaa aaatgcaaaa agttaaattg
    59701 agcgaaatta ttactaccga taatttaaaa actacaaata atagtttaaa aactagtaat
    59761 ttaaatttaa cagagccaaa aatagacaat gatttggctg ttttaaatat aaagtttgaa
    59821 aatttaagcg atgaaattaa aaacaatgct agagaaaagc ttaagtcttt aaagcaagta
    59881 gaaaaatata ttgaaggagg acttaagcag aaaagagctt tggaattatg cggtatttct
    59941 aaaatagaaa tttttagaat tcgcaaagca tataaagaaa atggcattct aggtcttatc
    60001 gacactcgcg gacttcaccg caaagataaa accaagctta gtgcttggat gcaagaatac
    60061 gctttaagag aatatcgcac ctttggggca ggtggattta atttcactga gctttggtgg
    60121 caaattcaca aggaagcagc cattaaagaa aattatgact ttataggttt tgatttggga
    60181 aaagtaaagc cactctttag tgtaaaaacc ttacaaaatt tcattaaaaa ctattataaa
    60241 gacaagcctt tggagcattg tattatcaca caaggcttag ataaagcaaa aagtaagttt
    60301 ctccctgcac aaggcaatca aagagagctt tatgatatga aaaacatgtg ttggcaaatc
    60361 gatagctctc cagctgattt tatagtaaga gatgatgaaa cactagagcc tttccgcccg
    60421 cacatcttaa gtgtcgttga tgtctttagt ggcatgggag tagctacctt agtaggaaaa
    60481 tcaaactctt taagcctaac tagactttta tggaaagcca tagataagtt tggtaagcct
    60541 gatatgatta aaggggataa tggtaaagat tatctttcaa aagattttca aagcttactt
    60601 gatagtctta atataagcta tgatgcagct attgcttacg caggagagca aaaagcttta
    60661 gttgaaaggc gttttggaac acttcaaaga gctagattat ctcaaatgca cggtcacatt
    60721 ggaaatagct tagctaaaag agaaatgata gagcaaaaaa ctcctaagaa agaaagaaaa
    60781 gctaaagatg aatacggctt tgctaaaaaa actaatcaaa aactccttca caccttcagc
    60841 gaagcttgtg agcttttgga agctgaagtg atcaagtgga acatgagcaa agttcgccga
    60901 aaaaaaggcg ttaaaactcc acttgaactt tggaactcgt gcgatagagc tattgtaaaa
    60961 atatcttatg aagaattttt gtttaatgct gggaataaag aacttagggt cgtgggcaaa
    61021 aaaggcatta actttgaaag tagagtttat aaaagtgctt taatgccaag tgttggcaca
    61081 agggttaaat gtgtgcaaaa tatcgataat attaaagaac ttttcattta tgatttaagc
    61141 ggaaactttc tttgtctagc acttgatgaa agtatcgcta aacttagtaa agaaagctat
    61201 aaaatgctta aaaaaggtta tgaaagtgaa gttaaagcga ttaaagaagt gcttaaaaaa
    61261 gatgagattg ccgcctttac taaacttaat attaaacaag acttacaaga tttacaaagt
    61321 gcttttgaaa actcactcgt agaagctaaa gaggtgcatc aaaaatccct tgcaaaagaa
    61381 actttaaaaa ctcaaagaga attagaagag attaaaaata atgctaatgc agatgagctt
    61441 attttaaatg ctaaaaaaga aataaataac gatgaaagcg agtttgacat ggaagctttt
    61501 gtcgaaaaga aatattttgc tggttaaaaa ttgtttaaag cttgattaat tcaaatttta
    61561 aagagttttt actcataaaa aaacaaaagg ataaaaaatg caattagtag aacttactaa
    61621 aaagttttta agcacccaaa acatctctca aaacaatctc tccgatcgtt tagggattaa
    61681 taaaagctat atggtgggct atatgaaaga aggaagtagc tataaatacg cttcaaaagt
    61741 agagccttta cttgaaaaat acattaaaag ctttgtggaa gaaaaaagcg tgaaagagct
    61801 tcaaacacct tttattgcca ctaaagatgc aaaggcgatt aatgtaacca ttgaaagtgc
    61861 catgagcaat cgcgaaatgg gagtaatcat tggcgaagcg gggactggaa aaagcagagc
    61921 cattaaagaa tatgccgcta aaaatggaac aagagtggtg ctttttgaag caacaactga
    61981 gacaagcaaa agaatgcttt tggtggggct tgaaaataaa ctcaatgtgt gttttaaagg
    62041 ttctttggat gataagatta gaggcattgc tagcgagtta gcaagaactt caaaggtttt
    62101 aattatagat gagagtgagc atttgccgtt tcgtgctttg gagtgcttaa gacgcatata
    62161 tgatttttca aatactgctt taatcttagt aggtactaga aaacttaaaa acaatcttac
    62221 aggcattggc agaaatgatt acaacgagta cggacaacta agctctagaa ttggtgcaaa
    62281 atgggaatta aaaggacttt gctaccaaaa caaagaaggt ttaaaagatg aagacttaaa
    62341 aacactttgt aatcattttg atgtggagga gaaaaaggct attgatttag tttttaacct
    62401 cgctcgtggc aactttagaa aaagtgagaa gcttttaaaa agagcttgtg aatttgcaga
    62461 tggaaaagcg gttgagctta aacacataga agctgccgca tcatttttaa tgctgggcta
    62521 aaaatgagtt ttgaagagat agctaaagaa cttaatctta gcgtgacacg cgttcatcaa
    62581 atctatactg aagctcttag aaagttaaag agtcctaaaa ataaagataa gtggatggct
    62641 atctttgaaa cgattgactt aatcaaaaaa gaaaaagcaa agaaagaaaa cttaatacaa
    62701 ggagagaaaa aatgatacca atgattaaag gtgagaaagc tgattatagt gcttcgcttt
    62761 ttgagataaa gggtgtaagc attatttata aagaaagtgg agtgtttgta gatgttttaa
    62821 aaggaattta tcctgattat attgcaaaaa aaatcattcg ttttcatttg ggtaaaaagc
    62881 ttaacaaaag tgcttaaatt aaagcacttt gattaagttt tttaaaactt aaatttatta
    62941 gaaaggatta acaatggcat tagtttatgt agcctctcct tacaaagctt tagtagtaag
    63001 agaaagtcaa agaaaagcac aagctattag catagctcag caagaatgct taaaaattat
    63061 gcgtgaatgt gaaggttttg tgcctgtttc acccatacta caatttagtt atttggatga
    63121 aaacaagcac agagacaaag ctttacaaat gggattagag cttttaaaag cgtgtgatta
    63181 tatttatctt agcaaacaca aagatgcaaa atattcacaa ggtatgcaag aagaattagc
    63241 acttgctaaa aagcttggca ttaaagagct agttttggag ttgcccttac aataagggct
    63301 taaggataat caagaaaaaa actaaacacg cagtgctttt aagatatggc gtaattcttt
    63361 gggattatca aattaataaa tttaatttaa aaggagaata gatgcaaata aataatttag
    63421 aagatgttaa cttagcactt aaaaaagtgg cagaacttag cgtaaaaata gaaaagatta
    63481 atggcgaggt gactttagct tgtaatgaga ttaaagaagc tcgtgcagga gagattaagg
    63541 ttttaagtga tgaacttaaa tatatagagc agtgcattac aaccttttgt gaaaataata
    63601 aacacgagtt tgcagaaaaa agaagcaaag aatttacctt tggcaagatt ggctatcgct
    63661 taagtaaaag tgtatcttta ccacgtgtga aagaaaaact agaaaactta atcaaagctt
    63721 taaaaagcta tggacttaat gattgcatta cttataaaga agaacttaat aaagatgcta
    63781 ttgcagagct tgaagatagc gccttagtaa agctaggact taaaagagtt gtaaaagata
    63841 attttagaat agagccaaag attgaaagct tggagattga aaaatgagag agctttcctt
    63901 agcgactttt aaacttttaa atagtgtttt taaaacaaaa acagctcatt ttaatggctt
    63961 tttagaactt gattttaaaa ataagcctaa gctaaaaaag caaagcttta aaagaaaaaa
    64021 gaaaatgact tcaaagcaaa aaattagact taaaagaatt taacaagtcc gctaaggcgg
    64081 atttgattaa gtttttaaaa cttaatttaa aacaaaagga taaaaaatgt atgtcaatgt
    64141 aagcatagat gcgagtgatt tagaagatat agatgctcat gatttggctg aactttttga
    64201 agatttaagc acaaaagagc aagaggaatt ctttggaatt atccataagg atatcaagcc
    64261 attagaaaga ataagagcta ttctttctaa tttgtctaat gatgaagcac ttaaactttt
    64321 aaaagaactt aataatgagt ttaaaagcga tgaggaatgg caaaaaacta taaaaagtat
    64381 aaatggaggt aacaaatgaa actacaagat tttgatttta gagtttggga taagcatcac
    64441 aagggttgtg gtaataagga ttgcaaatgc caaacaaaat atgtttatgg tgaagaagcc
    64501 aaaacaaggt tatctgagtt taaagaggat tgtgaaatag agctttttac agggctttat
    64561 gacaagaaag gtaaaaaagt atacgagaat gatattgtta aagttaaaag tctatacgat
    64621 tactttttag caaaaatcag cattcacaaa gaagggactt tttattttga aggaaaaaat
    64681 ggagattaca taggctcttt aatttattta gttgaagatg aaggatatac tattgaaact
    64741 atcggcaata tccacgagaa tcctgaactt ttgaaatgtt aaaaaatatt aaaaattt
//
LOCUS       DARATF010000002        44890 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.002, whole genome shotgun sequence.
ACCESSION   DARATF010000002 DARATF010000000
VERSION     DARATF010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.002"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..460)
                     /locus_tag="SB502_000073"
     CDS             complement(<1..460)
                     /locus_tag="SB502_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEG0433572.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQIL"
     gene            complement(457..1062)
                     /locus_tag="SB502_000074"
     CDS             complement(457..1062)
                     /locus_tag="SB502_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEG0433573.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICAKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLTKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKMGLEPKGLDFLKSLLEFSQIPLYAIGG
                     INAQNIENFKDINVVGVCMREILMKEKDLKKYLLECRQNLR"
     gene            complement(1052..2197)
                     /gene="thiH"
                     /locus_tag="SB502_000075"
     CDS             complement(1052..2197)
                     /gene="thiH"
                     /locus_tag="SB502_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HEG0433574.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLTQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLSEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNALKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFGALLGIDDFRKDALATALHAHFLQQAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            complement(2200..2976)
                     /locus_tag="SB502_000076"
     CDS             complement(2200..2976)
                     /locus_tag="SB502_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEG0433575.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKTQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDV
                     ALMAKAFSLAVNAGRAAFLAGLASVSKAKASSPLTGFLRD"
     gene            complement(2979..3782)
                     /gene="thiF"
                     /locus_tag="SB502_000077"
     CDS             complement(2979..3782)
                     /gene="thiF"
                     /locus_tag="SB502_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HEG0433576.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLKSLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDSVLICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKLGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(3779..3970)
                     /gene="thiS"
                     /locus_tag="SB502_000078"
     CDS             complement(3779..3970)
                     /gene="thiS"
                     /locus_tag="SB502_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEG0433577.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGLKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(3967..5409)
                     /locus_tag="SB502_000079"
     CDS             complement(3967..5409)
                     /locus_tag="SB502_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEG0433578.1"
                     /translation="MNLNQTLQEKYPHLEVSVLKLSEVKKNIDFRIDDSFWTMKLIYN
                     NKLNYKKIGECLLKSQYGISINMNEEGDGIPIYRMNDIDNMLCNFEVKKYALIDKNEL
                     QTFRLNYGDVLFNRTNSYEFVGRTGIFYNNRENFVFASYLVRLVCNKEILLPEYLTVF
                     LNTHIGKKEIRRRARPSINQTNVNPEELKEIKIPIFPMEFQLEIQNLVKDSHKALEES
                     KELYKKAEETLYLELGLDPKNPLQSLLDSKTNNPTNSPNISIHTLKESFLKTGRLDSE
                     YYQSKYEDIEKMIRSYKDGFCNLKDLVNDISSGFAFSSDDYQDVGELVLIRINNIKNA
                     TLDLSNVIYLKNEAYNLSPKDKIKKGDILISMSGSIGLSCVVRDDISAMVNQRILKIS
                     IKNFNSDVLVLLLNSFICKMQFERIGTGGVQTNLSSIDMQNILIPKIDSTTQEKIAKY
                     IQESFNLRKKSKQLLDNAKIKVEEQIQGKI"
     gene            complement(5535..6038)
                     /locus_tag="SB502_000080"
     CDS             complement(5535..6038)
                     /locus_tag="SB502_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433579.1"
                     /translation="MYHLLDFSTCKCENEKFDLAYKIFKQDFIEAPLYLAGCIYIDPQ
                     SHKKHKGKEKIFWHITTRENKQNKTREFDSQRACRINWIKQIIINHTHSEIKAFYYKE
                     KRAIRFYLWLYNHNFIVILQKLGRSSSFLVTSFYIDKGYNKNIYEKRYRNYINGNDIE
                     LKNCEWF"
     gene            complement(6041..6763)
                     /locus_tag="SB502_000081"
     CDS             complement(6041..6763)
                     /locus_tag="SB502_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HEG0433580.1"
                     /translation="MDNMKEFKIFCDESNHLFYKDNPTLCSKVMVLGALKVPSSEIIK
                     INKTIKYLKHKYKYNKEIKWTKLNLSQKGFYDELLEFFFSSVYMWFKAVLIPNKTILQ
                     HDIYNQGDHDLFYYKMYYQALHNLIDIDTKIKIYLDYKDTKSGDKIKGLEKVLFNKFK
                     QSVNIKIFTIQSHESNIVQLVDLLIGAISYKARNDIEHVSEIKNYIINKIETLANIEL
                     DAGTPPWENKCNIFRIQLGKGE"
     gene            complement(6768..8831)
                     /locus_tag="SB502_000082"
     CDS             complement(6768..8831)
                     /locus_tag="SB502_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEG0433581.1"
                     /translation="MIEEILKDSDYKLDLFSKKAIAELETKIIAKTNKNNQIIYYTNC
                     LIRDKEIKLTPEEIVRQLYIDKLLNEYNYPKDMIKIEFGVHFGREVKRADIVIIDKIQ
                     ITVPYIIIEVKKPKLKDSKEQLKSYCNATGATMAVWCNGKEISYYHRKDPNYFESIPN
                     IPASNQTLPDLLKVKITFDDLIKEDILKSQKRSLKNLVTEMEDEVLANAGVDVFEECF
                     KLIFIKLFDELEGARDRTKSLEFRNYGESDSELKQKIEKLFDKAKKKWEGVFNNDEKI
                     KLSPSHLSVCVSSLQNVKLFNSNLEVIDDAFEYLVNKSSKGEKGQYFTPRYVIDMCVK
                     MLNPKKDESMIDTASGSCGFPIHTCFYVWRSIYKERGIEASHLFTAQEKISECQDYVK
                     EKVFGIDFDEKSVRVSKMLNLIAGDGHTNVLYLNSIDFDRWDEWVKDDEDWQDVYFEG
                     FKRLKNLRVTKNQNRDFNFDVLMANPPFAGDIKESRILARYELGKKENGKPQSKVGRD
                     ILFIERNLDMLKPGGRMAIVLPQGRFNNSSDKYIREFIAQKARILAVVGLHGNVFKPH
                     TGTKTSVLFLQKWDDKLCPKCEDYNIFFATMNEPSKDNSGEKIYYPLLDSHDHLVVKH
                     DLFHPHLEGDEPIKQKDESQEEFDKRIQEYRLNVEKYKDLQKDGIAEAFIEFAKAENL
                     SFWKE"
     gene            complement(8841..9938)
                     /gene="dapE"
                     /locus_tag="SB502_000083"
     CDS             complement(8841..9938)
                     /gene="dapE"
                     /locus_tag="SB502_000083"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEG0433582.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSSDAFVPMEKEGFIYARGAQDMKSGVA
                     AFVDAAKNVDFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(9942..10541)
                     /locus_tag="SB502_000084"
     CDS             complement(9942..10541)
                     /locus_tag="SB502_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEG0433583.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRFLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVVAILFWVSALAF
                     VVARYSYVFSAKVVFIINIISAIIIEYFALNLLYKTFLG"
     gene            complement(10534..11235)
                     /locus_tag="SB502_000085"
     CDS             complement(10534..11235)
                     /locus_tag="SB502_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HEG0433584.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAID
                     KIALDIENFMKDGNV"
     gene            complement(11278..14109)
                     /locus_tag="SB502_000086"
                     /pseudo
     CDS             complement(11278..14109)
                     /locus_tag="SB502_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517037.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            14710..15339
                     /locus_tag="SB502_000087"
     CDS             14710..15339
                     /locus_tag="SB502_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HEG0433585.1"
                     /translation="MQMQEVIEKLKDILASEGKRDLKTKDIAKELGINPDTFNSMKFR
                     NSIPYPQILNFLNERNISINYFFYGVSPKDQLECENKYKILKLYKTNASLGGGGINDL
                     IDCSELIVDEKLLNFFGSKECEFITCYGESMEPLIKDGSICVIDRNKTFKNKSICVIN
                     TRDGLFIKQVLKQDDGVILHSLNPLYKDIFYKNGDFLLIGVVIGELSKM"
     gene            15420..15740
                     /locus_tag="SB502_000088"
     CDS             15420..15740
                     /locus_tag="SB502_000088"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433586.1"
                     /translation="MKDIKNYTDKELKEKIIQDLESEFRILYKKLLKEKDYLARDNIL
                     ELMTIYNMGINSYSIAKRFEMNEDKSLIQVPLFERYIIGRKFVVKYNDEKQRYELKST
                     FCEF"
     gene            15750..15944
                     /locus_tag="SB502_000089"
     CDS             15750..15944
                     /locus_tag="SB502_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433587.1"
                     /translation="MKYPNVYVKLVGEDGNAFSILARVSKALKKAGVSKEEISKFQKE
                     AMSSDYNHLLNVVQDWVNTN"
     gene            16024..16311
                     /locus_tag="SB502_000090"
     CDS             16024..16311
                     /locus_tag="SB502_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433588.1"
                     /translation="MSKVIVDIKKGFSKTFINAICNHNNELVLEYLKNGMSATKECMG
                     EEPMFYAITHNNFGAILLLLKYGAILDKNYLEEYNKDFSKEALKFLSSLLK"
     gene            complement(16341..17156)
                     /locus_tag="SB502_000091"
     CDS             complement(16341..17156)
                     /locus_tag="SB502_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEG0433589.1"
                     /translation="MKNNTDKFLKTSTLTKPTRTTLKAPFAWVGGKNYLAKEIIALMP
                     EHKSYIEVFGGALSVFYQKSASKIEVINDINDELINLHLCIRNKPQSLANVLNSMIIS
                     RKIFHMLKNKEIKPKNDLERAAFYFYLISTSFGSSMGQFAMSKQRAPKRLCRDFSLHT
                     KRLKNASIENKSFEYILKEYDYNEALFYLDPPYVGTESYYKNVPCFGLKEHELLCNLL
                     KNIKGKFMLSYNDCELIRELYKDFNIKELKIRYSLNNNVLKRKESKELLIMNF"
     gene            complement(17358..17846)
                     /locus_tag="SB502_000092"
     CDS             complement(17358..17846)
                     /locus_tag="SB502_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEG0433590.1"
                     /translation="MSEYIEIKGLENFFKACDKLIDMDKHGQSIMAGAGESIRNSIID
                     SFKNERSIFNGKWKSLKPATIKQKIKDGKNKGILKRDGELSNALNWQSEPTKSGVKVF
                     NNIQTENGFKYGYVHQWGNRKRKIPQRAFLPIDNNKVLHPSIRSVIYKDTKDFIEKIV
                     KK"
     gene            complement(17850..20066)
                     /locus_tag="SB502_000093"
     CDS             complement(17850..20066)
                     /locus_tag="SB502_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEG0433591.1"
                     /translation="MENAGSIGIGVILGLAIKNASAVGKVVKDFSNLEKIAAKTKLGI
                     SGLQKELNTLKLNANLRAELKAQRKGLQDEFLSLGNVIRGGIIGKGLGEAISFESAMA
                     DVRKVVNFDEGDDIKKMSADILKMSQTLPVTANELAAIAAAGGQIGLGSKDVREFTNL
                     VTKMKVAFDMSAEDVGDSVAKIKNILGISLKDMEDLGDSINNLSDNSASKAREIIDVM
                     KRTAAAGKQIGFTKEQIAALSSSFISLGKGPEVAGTAINSLYRVLATADNMGTKTESA
                     FAKLGISGAFLKQASFDDPQKALDMFLQRISKLDQKEQMGVLVDIFGREFADDMATLV
                     GGLDTYKEALKNAGDEAKKGSLQREFDTRAATTENSIILMKNAFNSLAVNLGSVFLPA
                     ISWVSAGISYLVNSITYITGLVPGLNGVLGGLIATFLLAKPAVLAYAIAKNYLKDCTI
                     LLKSALIKTRIHLLAFRNSCILSNITLKAKTVTTTIYTTSLKALSFVLGGLNKVFKAV
                     ANGIRVLSVAMMSNPIGLILGGIAIVAGLIIANWDKVKSWFKSFIEWLKPVWEPIYNV
                     IKAVFDKCALVFTSFKDIIMSVASPLAEFLNSIWQGVGDFFYSVFGSLFDWFASKLSW
                     VGDMISSISGFIKDALDFIGLGDDEEVKISQSEQNKEKVFTTNTYKDELAETKSINHT
                     PSFNNGNINVSVNGTFNIATKDGNFNMQEFANAIQKSVFDALRKQEQNKINTTIYG"
     gene            20108..20413
                     /locus_tag="SB502_000094"
     CDS             20108..20413
                     /locus_tag="SB502_000094"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433592.1"
                     /translation="MKVLKFINDDIISHIALLLTTLIPAFYISYQSASDGFFNTMAIF
                     IFSYFASIIITAILVMIMPPIALLLILPTWLIVISLDFILFAILKIYFLKNKTIKNS"
     gene            complement(20525..20764)
                     /locus_tag="SB502_000095"
     CDS             complement(20525..20764)
                     /locus_tag="SB502_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HEG0433593.1"
                     /translation="MKEKIIKLENGEELKMREPNVRVLKNATNKGEKEMEQTICMIAA
                     LTNKQESEIEDLNLKDFKALQDALKDFLVEAGVIA"
     gene            complement(20917..21426)
                     /locus_tag="SB502_000096"
     CDS             complement(20917..21426)
                     /locus_tag="SB502_000096"
                     /inference="COORDINATES: protein motif:HMM:NF016846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HEG0433594.1"
                     /translation="MKRIIGEVIQEGNIYIDGQGYLGVVRNLKLPDIEQEMIETKGVL
                     GANYSSGVLKPLEISFKLAVVDPVLYAAFFHTTFSEIKAPLLFRESVHKGGKNYGISA
                     EFLGEFISISESDHESGKEVEAEIKMAVHFYMQRRNNIPIITYDHKNTILMINGVDMM
                     SDVRSNLTL"
     gene            complement(21453..22646)
                     /locus_tag="SB502_000097"
     CDS             complement(21453..22646)
                     /locus_tag="SB502_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HEG0433595.1"
                     /translation="MAANYGVNFNISNGAASPIKVQSDTPIGIAGAIKGASKEMIYTK
                     AGYESADSFPIFAFSNVSKAKEFVNDLIKENNLQDFRLLDTLECINLQNVSNVIIVSF
                     FEESEESENTLTNIVNAIEAFKKAKHKTGFSPDLIITPYYSHEAGVKAKLESVASSMN
                     ITAIVDLYATNVGEAINTMEAFSSKRLIATWPQVQILNTQGKYAYVPQSPIIAGLIAH
                     TDGDKEYGFSDSYSNRVMNGVTGTEHFIEFINGFDCDAERLRNAHISTCILSEGYRSW
                     GGETSHEDTIWQDLARVRTFDRIALAGQKAAFKAIDKKASELYFIKISIEELLRDLKG
                     AKVLIGYEVSWDEERNTDANVSAGKFYLNIKMMNNPIVKQITLEFIYSDKWASDLIKT
                     ISADS"
     gene            complement(22665..23672)
                     /locus_tag="SB502_000098"
     CDS             complement(22665..23672)
                     /locus_tag="SB502_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433596.1"
                     /translation="MKDYGISFIPDINQGSKEPSEPIVSDKLNAQKVNELIDKKLKLF
                     KEELVNKEELKSLIEEILQDQNFQNTNIKISKTPPNYNTQAKVGEIWAVVESKKQLFI
                     CTANDNDFTSWVDLLGDGSNDIAPKEKIIITFDNTTTGGQYGGCMSDLRLGFENGFAT
                     PNKVQDEYENAKFTMTKDGNGLNRSDFTIDSNPTPTDNQIVGTIKTSGIYQETYHKIA
                     HVFKKYNGGADECCLWSSSGSREVSIELENTPMPNKLFARGNGYYGQTEITNVRVKKS
                     IFIGEQEIQSEDFNVEKLEASSDTYGDYAFLFEISKQDQIVMKKELNLNPKKTKKYKK
                     M"
     gene            complement(23669..24055)
                     /locus_tag="SB502_000099"
     CDS             complement(23669..24055)
                     /locus_tag="SB502_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HEG0433597.1"
                     /translation="MTKTELKRVCVKPYDKDRFEVISDYAFSLPNYKGIVPQGFKTDG
                     ASIPRLFWSLFPPFKSEYFSACVVHDFLCEKANSRTDYRTADLALKEAMTLLGCSKFK
                     IFVFYHSCNLYHAIKCVFKSIKKELK"
     gene            complement(24052..24558)
                     /locus_tag="SB502_000100"
     CDS             complement(24052..24558)
                     /locus_tag="SB502_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HEG0433598.1"
                     /translation="MKYFIDKNDNNQIYAYEDEVSDEQIKTGLTPINEEEFNSLINPP
                     KSEEELLNEAKELKINEINAKKENILNGGFSFKGKIYQSSNEDQLRINGAVTNALVNP
                     NLIPYIDWIALDNSTTRFSVDEFKLFASSMAYFVQETIFKASALKEKARNAQSKEELD
                     LIVWESEK"
     gene            complement(24583..25614)
                     /locus_tag="SB502_000101"
     CDS             complement(24583..25614)
                     /locus_tag="SB502_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEG0433599.1"
                     /translation="MAKSEYYTILTKIGIAKFIAARASGNGINLKSFKLSSKVILPSE
                     EMQSLEEIVYEANISSKSVDESNPNYVNLMCHVPSDVGGFEVNAVGIYDEAGDLLAVG
                     NVPRTYKPILKEGSAKELMIKIVMELSNAEEVILKLDPSVIMASRDYVDAIKVELNLK
                     IDALTQKYDAEFKKVWDELSKYLLENKFNTEIAKYVTLATNQTIAGAKNFTKLPTSSI
                     KATNDNQFVNLATLKEQAPSLIGGLGVNQAWQNVSRAFDVTYTNNTGKPIAAKFQVNA
                     SASGGVSFSCSEQFVVSMFQTSLSNGGVSRTYFGFGIIPPNGQYRLNTPEHSGFYPSK
                     SIVSFMELR"
     gene            complement(25614..26234)
                     /locus_tag="SB502_000102"
     CDS             complement(25614..26234)
                     /locus_tag="SB502_000102"
                     /inference="COORDINATES: protein motif:HMM:NF021220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HEG0433600.1"
                     /translation="MNTLILNHHPKQSKAIDLSAKTRFEDLNLSSITNLALNCDERLL
                     PILANAYDVSIDGLNEKEARKLISKALLLDRYNGTTWAIKEALRAVFPTAVVKEWFNY
                     GGKPYFFKVKVSTTNVSFDERTLNTLERLIYDFKNVRSVLEAIEIEIESKNDSFNANA
                     QISGETIEILPFQTTQIENNQKPSLNAMGVFICEITRTNIDFKGVY"
     gene            complement(26231..27397)
                     /locus_tag="SB502_000103"
     CDS             complement(26231..27397)
                     /locus_tag="SB502_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEG0433601.1"
                     /translation="MSELLSANDSYFKQSFLKDIPYPQIIEELDYEKLLKAYEELFKS
                     FLKDNVELLESDPFKAILEALAYREMIIRARINESIKATYLHYAKGSDLDNVVANGYL
                     IQRLKGVKPTAKVEFELNTLLTYDVIIPKGAIFSNEKADLATLKEEVVIKKGQSKAQG
                     ILELNKFIQSKESKTEFLQTPLPFVAKIKQLEYFSGGASEESDEALRERAIMSVHRFS
                     TAGSEKGYIYHALSASAKVASIKALNNGAGKVRVIIKSEDELSVDVVKEYLSADERRP
                     LTDEVSVELAKKREFIVDAKLLLLELSRANEISEKINALQKDFDLSVDLALGFIYKCL
                     HQDGVYKSEILSIKEKIINEEEQELKDLPLENIIIADDEFATLSFSLSYEKAVL"
     gene            complement(27394..27684)
                     /locus_tag="SB502_000104"
     CDS             complement(27394..27684)
                     /locus_tag="SB502_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HEG0433602.1"
                     /translation="MNYMVSIEESIKDILITPLGSRVMRPEYGSLLYTLIDRKIDDDF
                     KIKLTRYTAEAISKWEKRVKLKGVRLNECKDNKLSITLLFENYGDLTMELGK"
     gene            complement(27681..27872)
                     /locus_tag="SB502_000105"
     CDS             complement(27681..27872)
                     /locus_tag="SB502_000105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433603.1"
                     /translation="MKELFLLLFSLVFFMLFCMGAFYAFLNLNFFIKSIFIGFFIAFM
                     FLGFSQMLENIFEFYKGLK"
     gene            complement(27881..28513)
                     /locus_tag="SB502_000106"
     CDS             complement(27881..28513)
                     /locus_tag="SB502_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEG0433604.1"
                     /translation="MNELGIICDIKDNKAKVAIGDMVTDFLSVFQSLANSYAVSFSPL
                     RIGEQVLVIPVRGDLNSGVILRGLYQEKHRAKNTDENTFNIDFEDGTHLEYNSKSSTL
                     KLDVVKNINITCVDKTTHNQNNTLNTKNHTTNANTITLNAPSINLNGNTQIAGAISTS
                     GEGGASGTFSIKGNLNLIGNLQVSGNISDSKGDLTNHTHSCTCGATASPR"
     gene            complement(28513..28827)
                     /locus_tag="SB502_000107"
     CDS             complement(28513..28827)
                     /locus_tag="SB502_000107"
                     /inference="COORDINATES: protein motif:HMM:NF027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433605.1"
                     /translation="MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFL
                     KGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKME
                     KL"
     gene            complement(28939..29187)
                     /locus_tag="SB502_000108"
     CDS             complement(28939..29187)
                     /locus_tag="SB502_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433606.1"
                     /translation="MNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKL
                     PLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK"
     gene            complement(29184..29525)
                     /locus_tag="SB502_000109"
     CDS             complement(29184..29525)
                     /locus_tag="SB502_000109"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433607.1"
                     /translation="MFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLK
                     ALHFSNEINVFKDKLTQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCQSELKAY
                     KELFNILGAKK"
     gene            complement(29536..29925)
                     /locus_tag="SB502_000110"
     CDS             complement(29536..29925)
                     /locus_tag="SB502_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEG0433608.1"
                     /translation="MKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCEIREHYNAP
                     IIINSGYRCKEHNAEVGGAPKSQHTIGSAADFVVKGVKTEEVHQYVLNTYGERSLGIA
                     IKHNFNDPYAGFVHLDTRGKKARWTYP"
     gene            30073..30507
                     /locus_tag="SB502_000111"
     CDS             30073..30507
                     /locus_tag="SB502_000111"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433609.1"
                     /translation="MLKSFENELLELLKDFKVRMYLGEFEDTQNIASCINNLDASLLL
                     DFEGESYKDLENKVGTWKLYILTHTKSKAPKHRIDAKHKLFDAIEAVDKVLLNAEPSN
                     GFRIELKDLKKVYEGISDHGYLSIYARTLQSSFLPKDDFLRI"
     gene            30509..31324
                     /locus_tag="SB502_000112"
     CDS             30509..31324
                     /locus_tag="SB502_000112"
                     /inference="COORDINATES: protein motif:HMM:NF021627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433610.1"
                     /translation="MLFINKENLVEVSNDKPIKVAIKGEWKGHNNGRFKVDDKDLNSM
                     IDNFNQKKIDLVIDYEHQSLKNEKAPAAGWIKELYLENDALMAKAEFNEEAKKYIANK
                     QYRYLSPVFEFNSKDNKSGELVRAKLHSVALTNTPFIDELGELIANKNNIHQNKGEKM
                     DEKIKELESQIIALKNENSSLVLQNEALKKQNEESVKNLASSLVDNALNSGKIANSQK
                     EWALMYACKDLEGFKSFLDTKNDQVQVPKNNVFANKNTAKTNEFDVVKMMLGD"
     gene            31327..31854
                     /locus_tag="SB502_000113"
     CDS             31327..31854
                     /locus_tag="SB502_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433611.1"
                     /translation="MAKAKKETQNLENEDLETGDLPKALSLEDENLANEEAVSENETA
                     KEFINEEGEEMPSKVTPKSLSNDPLIAMPKSLESFINKDLFSINAKIDLETNESLALG
                     TLLISEDFGESFKKCPNEDISAKENVKLAMLKDHALSSGVYGVLLAGEINLKGVHVSA
                     VKKAFMQNLIINTKE"
     gene            31857..32834
                     /locus_tag="SB502_000114"
     CDS             31857..32834
                     /locus_tag="SB502_000114"
                     /inference="COORDINATES: protein motif:HMM:NF015802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HEG0433612.1"
                     /translation="MDLEQLLELFSSTKITEVINQTKASPRFVSDTFFKDKIPSLEST
                     VRVEIIKGAGIVLNSISDNGEHSLENTKDAYILNIPLPRFALAKRISASEINSLRSLA
                     LQEAQTKSLSGALGVLVKEMKESFNTTLEYMANGALFGKILDGKGNVLFDFGSASKKA
                     VSVKKDGSVTLASVCDAIDSAIIDEFGTSADYEVLCGNELFAAISNLALSEDLYKNHL
                     ASRDEKDKSLILYGTKYRRYSAKYKNTNGKSVEFLKGTEGMVVPKDNSNRIYYTRANH
                     TDALGKAPSLMFVSKPEILPRGAGIEIVGEMRAMPVCTRPNGLIKLVLE"
     gene            32951..33409
                     /locus_tag="SB502_000115"
     CDS             32951..33409
                     /locus_tag="SB502_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HEG0433613.1"
                     /translation="MNYQDILEEKLITETKTHFFMIDEKDLIKELSVHAIAELSDLNA
                     DGVCDKEVIDDAINDAQSYIASFIKIPKNPTPLLKDICVKLTIMELKRRNDFPKESLE
                     EIREWANDLLLKMANKKIPTEINEDNFIPQNKVRAFKIKRKRMDLRRLNG"
     gene            33402..34001
                     /locus_tag="SB502_000116"
     CDS             33402..34001
                     /locus_tag="SB502_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEG0433614.1"
                     /translation="MAKNLTSTTKPKMAKVGCGLQVGAESETPARKDKFTSSAKSQNN
                     LKDLAKELYIAGFDIFKIAKILNRNEKTIRNYKAKDGDWDKQKANLLTSKIKDKESAS
                     LYESFTEQMFCAIENINTDEKMNAEKKTEAIARIGDSFSKMRKVARLEDPSSYRLNVA
                     KKVVEIIISHLKNDKDCVAKLVSLLESGVIEKEILAMDI"
     gene            34001..35671
                     /gene="terL"
                     /locus_tag="SB502_000117"
     CDS             34001..35671
                     /gene="terL"
                     /locus_tag="SB502_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEG0433615.1"
                     /translation="MLFSKEELDEFLISNEQKHKNTPNELKGAMQRKDFLEWMDELKN
                     ELKTQFLHESHLDPTLKQERIKRASVDFDYFARTYFPHYFTIKGECGLHLHLNEVFTK
                     IALKKESKGEKHAIAAPRAHGKSTYTSQLFPLWCLVFNYKSFIVEISDAVELMEGMLE
                     AIKAELEDNPHLKLDFPEVVGIGKTWRVGEFVSNNGVKIKAFGSGKRLRGVRYGVKRP
                     DLVILDDLENDTNVRSKDQRDKLEDWVDEAVLNLGSADGSLDVLYIGTILHNDSVLSR
                     KLKLGFWNPKVFRSIEEFPQRLDLWDEYATLYRNADFNTAHQFYLKNKALMDKGAKVL
                     WEEAKSLEDLMKLRAENLKAFNKEQLNNPRSENQIFSLDGINFYDDLPAINQYYMYID
                     PAGEKAKSDFTAITIIGKGTKGFYVAESIVKILKAQSIIKTIFNLQKIYKCRLIEIET
                     NGGQFFLKKWLQEKSLESGVFLPLRGKNNSVSKFERIESLSLAFENEELFLHKSQTML
                     INQLLEFPEGKNDDAPDSLAGAFLLARTKSSIKRRKHHFNSVSRIRRF"
     gene            35681..37057
                     /locus_tag="SB502_000118"
     CDS             35681..37057
                     /locus_tag="SB502_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HEG0433616.1"
                     /translation="MKETKSKREVILKNNSLINTLINSSYINVLKISENDQRMIFKDL
                     SFTQAHQSRRSVILAKELQIVCENEKIKESFEYLFNPDLIGQILETYLYGLNVFEVNY
                     KLKDGFYYPILKQRDFRNFGFNENDELIYNGNGFDEIIEDKKAIYGLFGSNFLFKNGD
                     ALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDALASEIHQMLNGDSAVI
                     DKEEELDLIQPKAKANYNEIIDYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKD
                     LAAQDGQIVLFILNRAIKFFKEINHFKDELYVQFFSEAEPKSELCERDLKLFNMGFNF
                     DEEYIKSTYNVEGKLIKELLNQESKVLKDDKENKKALFENKAKLESFEEDFIDKALEQ
                     KEYLKVDESMSKFFQEQFESIVKDCKDFNEALNKLKENFSSLEQSEFEKHLFIALNNS
                     SILGYLED"
     gene            37059..38297
                     /locus_tag="SB502_000119"
     CDS             37059..38297
                     /locus_tag="SB502_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002909482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433617.1"
                     /translation="MTGAKIGFFSEPTKAVDFLKNKKPELSFDYDELSYSTHKKVFTI
                     AKLMDESLLKDMQDTLVNAIKNGDKFSTWSKIAEEKLKAKGWWGSKEVINPKTGEVKK
                     THFNSARLKKIFEENSRKAKAKAIYENQMKSTKPYFKYCTQKDSLVRDKHRAFDGIVL
                     HKDDPFWDTHYPHVTMHDYGCRCKVINLGESEVKDLKIPPSNTKESEFNGFNDEELLD
                     ELYKQKNTEVIQNFIKLDMLSAAAKKTKEVKSFAHQKELYTWQKSLDDMVDEVLIKDN
                     QKYPINFIQVGKMDKSTKEFLEKLNKKDLEDLYFTLSKNNLLHASPKRKASYNQALSA
                     DEIKQIVKVLDEAKEVYWDNANNSLLYFFEDKKDASRINKIVITPDYKLKKFGKTNAI
                     VTLGKVEAINKDNKTYIKIR"
     gene            38422..38796
                     /locus_tag="SB502_000120"
     CDS             38422..38796
                     /locus_tag="SB502_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEG0433618.1"
                     /translation="MVLALGEFEFKALNFDNLERSLEYNIQSQNRLNNHNALFASSKE
                     SEKIKIQGKTLPLKGDRNTYLDKLENMAKEQRSFILTGANGKYYGKFVILSLNENRSA
                     FVDGSGFVAQSFSMDLERDFDE"
     gene            38789..38980
                     /locus_tag="SB502_000121"
     CDS             38789..38980
                     /locus_tag="SB502_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HEG0433619.1"
                     /translation="MSKIYIAKNNERLDSIVYKHYGTLLYFNQVLLANPRLEPLLKTG
                     DKVILPSIKIKESKEKALW"
     gene            38974..39951
                     /locus_tag="SB502_000122"
     CDS             38974..39951
                     /locus_tag="SB502_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEG0433620.1"
                     /translation="MVRKPKFKLIAKGEDITEKLSKNLISISYEDKEKAESDEISLSV
                     FGLYSKPLFGDSLELWLGFEKLYKCGSFSVNVVSKNYTSNTTEVRASAINFSGKGSVN
                     IKEKKTRSFENTTLFTIARKIANENNLKIKTSGEDQNIVSILQNNQSNLEFLYSICFD
                     YGFICCVKENTLIITPKDGKIGDNAANITSKNENLPLFEIALKECISLEISESARNEY
                     SAVIAEWQDINEAKIKSIKVGSGENIYKMQISQPKNDNEAFKKAQAKLNELQKGGLNG
                     RCELIGREIRAGGKLKIKDINMDHYEFSIKSVSHSFNDSAYIVSVEFES"
     gene            complement(39948..40853)
                     /locus_tag="SB502_000123"
     CDS             complement(39948..40853)
                     /locus_tag="SB502_000123"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433621.1"
                     /translation="MSLSQTNIEKNKIELINRLFKCYLDYLQVDLSNFFRNDSDRGRN
                     IDAIVSFRDIFGSILFFDQINSTLLSDTKHDLDKLEIFIEKLLKKGRNLTKIKKDNIN
                     PSCIKKILEDDQIVDLIGEILNAAGYFRESSEKPYMKDFKNVYCDCSKINKLIKSIIN
                     KAKEDILSILKQSKDGKSNGFVQPVLEVHNAFSHLATFFYQDNPEDPFKNIDKAKSHL
                     YRAILDYYKILIRFSINEVKKKDMLTKSFYLIREQEFLLLGQDLKDKKITFFNPKLEK
                     EEQQDIMIAYKILFETIDEILEHQS"
     gene            complement(40819..41025)
                     /locus_tag="SB502_000124"
     CDS             complement(40819..41025)
                     /locus_tag="SB502_000124"
                     /inference="COORDINATES: protein motif:HMM:NF033604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CJH_07325 family protein"
                     /protein_id="HEG0433622.1"
                     /translation="MEKLVRDSYGKVNYINIPFHNTGSVSDICIKIEDKELNQALQDL
                     SDSIDKSYKNSGVYEFITNKYRKK"
     gene            complement(41147..41431)
                     /locus_tag="SB502_000125"
     CDS             complement(41147..41431)
                     /locus_tag="SB502_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEG0433623.1"
                     /translation="MLSNNEYFEYFIDFVKNNDKREILKEFGGANIYIPSYKTLLRDE
                     ELKQDFKTLIKQGISTKNASAECAKKYDLSLNAVYLITKELRENLEPSLF"
     gene            41525..42196
                     /locus_tag="SB502_000126"
     CDS             41525..42196
                     /locus_tag="SB502_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEG0433624.1"
                     /translation="MKKIISVLILALSLLNAKSFEESKKELVKFYNDLGSSYWYDFYC
                     QAPFKVNKKGKYISFEVIKSDLYAPRNEYTKKGKINQRIKRIEWEHIMPAQNFGKHLP
                     CWKEGGRKACKNDPTFAKMEADKQNLVPAIGEINGDRSNFRYAEAPTNLKYTQYGNCK
                     VYTDFKAKRFYPANYSKGWIARSYLYMSKTYNIKLSDQERKLMEAWDKQYPMDEKEKR
                     IRELL"
     gene            complement(42188..42463)
                     /locus_tag="SB502_000127"
     CDS             complement(42188..42463)
                     /locus_tag="SB502_000127"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433625.1"
                     /translation="MILEIHSYDAEFFLTLGIEKHSQIAFAAKRTSLEIMHNGITHQI
                     KTDKDFGILLNVICVIRERIDESFEEEDKSLVIDIDEIVAKVCKELE"
     gene            complement(42510..42959)
                     /locus_tag="SB502_000128"
     CDS             complement(42510..42959)
                     /locus_tag="SB502_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HEG0433626.1"
                     /translation="MNTQNTLKKHLIKIIHTLRKDTNLSDDESYRWVLNERYGKASSK
                     DLSIDELRDFAITLGYDEKFLKKQNTKKARYFKKENTKSGRATKKQLNMIQAIWSKNA
                     KNPTQWALREFINNIIKKRPLYLWYLSVEDANKVILGLKNLENNSTH"
     gene            complement(42956..43648)
                     /locus_tag="SB502_000129"
     CDS             complement(42956..43648)
                     /locus_tag="SB502_000129"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433627.1"
                     /translation="MDNAKEALKELFGISEVQAVVIEKLYFKAKTPKDILGFKKYYDL
                     TMLKKQFVGTSYEKLSLVCAFAELDLNLRYKNIESFLEWLFISFSNRFIFQTKKGDFS
                     YSFVLRYYDGNIVYDELGKPVLKHVDCGDNLYFINANKELCDEQRKPLNVGEFYNKLV
                     EYMFKNQDKIIFDNKIEISPVIKTQIPSQTKINKDYEQNYLEYKKNQDKLYNANIDKF
                     TSKLEQILKAKK"
     gene            complement(43648..43917)
                     /locus_tag="SB502_000130"
     CDS             complement(43648..43917)
                     /locus_tag="SB502_000130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433628.1"
                     /translation="MKFNPPSKEDLIKAIDEFNAKNSCSIPYFIADSFINYYKQDDGR
                     WLMANKKPLKCWKRALNSTWLPKLANKYKNKDKQKALASWLEEEF"
     gene            complement(43914..44876)
                     /locus_tag="SB502_000131"
     CDS             complement(43914..44876)
                     /locus_tag="SB502_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433629.1"
                     /translation="MNLDFLNEFKLKNKDLNEKLEFLIPDFLVKKAITIIYANGGSGK
                     SYLSAAISKTLCKDARVKSIVYVDMDNPLNVLNERGFGELILNESKFTYIHRSSLKTS
                     AYELLEMIEGKGVAGSYEGVLFVLDSLRNFADIDNDTKMMSLMSLLMNLRECGATIMA
                     LHHSTKDGRAFKGSNHIRNSSDCMYFLQKVANLEQGFEVLLSVQKERAGIKDQAFFIN
                     TKTLNIKNTDLQNAKISDKEEAFIDKVLKLLNEKSLSTSEILSALDVSRSDNFSRNTL
                     EKFKGVFWESELGGENGRTFVWKSLKADNKDSNDKELSLFGGEL"
BASE COUNT        15251 a         7460 c         6215 g        15964 t
ORIGIN      
        1 ctaaaatttg cgtattttct tcaaaatgcg gtgaaaaact ttccaaaatt ccttgcaaaa
       61 tcttatcatt ttttacccaa aaaatttcat agttttgaaa cttttgatct agtttaaaaa
      121 aatctttata cttataaata agctcaatta aaaatgcatt gtcaaaaaaa aataaataag
      181 cttcataaac tcctttacta agtcctacat tgcttaaagt atagctccca gcttttaaaa
      241 acaaagtttc ataagagtta atcttataat cttttgatgc agtgtgtaaa attttatatc
      301 ctttgcgaac aaaagttaaa agatgacttc ctacattaac aaaagtagaa tgcgaagtat
      361 ccgtttgtgt atatttagca aaagtgcaag atttaatttt tttataattg acacctttta
      421 attgctttaa atcttctggt aaagaaagaa ttttattcat cgtaaatttt gcctacattc
      481 taaaagatac tttttaagat ctttttcttt cattaaaatt tcacgcatgc aaacacctac
      541 tacatttata tctttaaaat tttctatatt ttgagcattg ataccgccta tagcataaag
      601 tggaatttga ctaaattcaa gcaaggattt taaaaaatca agccctttag gttctaaacc
      661 catcttgcaa gaactttcaa aaatatgccc tacaaaagca taatttacct tatagctcat
      721 cgcctctaaa agctcttctt tgctatggac tgaagtacca agtatatgaa aatattttgt
      781 taatttaggt tcttttctta gcaaagaaag cggtgcgtga aaataacgat gtcccaattt
      841 taaacactcc ctatcaaaaa aatgcaaaaa acaagtcact ttttgctttg cgcaaatgct
      901 taaaacttct tttgctaagt cataatactc aaattcgctt aaatcttttt ctcttaaaac
      961 tatagcatct accttagcct tagcaagttt ttcaatctgc tttaaaaagt ctatttctac
     1021 acattttcta tcgcttatgg cgatgatttt tttatcccac atagatacta tcgctcatca
     1081 cagcttgtaa attggatctt ttaagcatag ctaaaatttc atccacgctc ctatcatctg
     1141 aaatttcaaa ctgctcatca ccctttttct cacccttatg ctcacctata cccacactca
     1201 ctcctgcact cattttagta gcaccaagct tgataacctc atctctaaag cctattcttt
     1261 cacgacttga aatggtaatg cctgcaaaag gtaaaaaaag tctataagca caaagtactt
     1321 gcaaaaggcg tttttcactc acatctttag gatgaatttt agcattattg ataataggtc
     1381 ttaaacgagg caccgaaata gaaatttcag catgaggata agcttgttgt aaaaaatgcg
     1441 catgaagtgc cgtagcaagg gcgtcttttc taaaatcatc tatacccaaa agtgcgccaa
     1501 aagccactcc acgcataccc gcttttaaag ctctttcttg agcattaaag cgataaggga
     1561 aaatgcgttt ttcaccagct aaatgaattt tagaatattt taaagcattg taagtttctt
     1621 gaaaaacagt cacataatca caaccctttt catgcaaaat tttatattca tcttcattca
     1681 taggataaat ttcaacgcct acaaccttaa aatactctct agctatttta caagcatttg
     1741 ctatatattc tacacttgca aactccctac cctcgcctgt tagcattaaa atttcttcta
     1801 aaccactttt agcaatggct tgcatttctt cgtgaatttc agcttcactt agcttggctc
     1861 ttgcgatttt attacctttt tgaaaaccac aataaacaca tttagaatta caataatttg
     1921 acaaataaag tggggtaaaa agagagatag aatttccaaa atatttttgc ttgactttag
     1981 cggatttaaa ggctaattct tctatgaaat cttctgctgc acttgaaagc aaagctttta
     2041 aatgctctat gcttaaatgt gtttgattta aagcattttt aacatcttta gcgctaaatt
     2101 gactctcatc ataactttga acttgagtta aaaccttgtt taaaatttcg ctttttattt
     2161 cctgcatatg aggtaaatac tgcatataat cttgcataat caatccctta aaaagcctgt
     2221 taatggagaa cttgctttag ctttactcac acttgccaaa cctgctaaaa aagccgctct
     2281 tcccgcattt actgccaaag aaaacgcttt ggccattaaa gcaacatctt ttgcttcagc
     2341 tatggctgta tttaccatca ccgcacttac tcccatttgc atagcttcac aagcttgtga
     2401 aggacttcca atacccgcat ctacaatgat aggcaaatca atttcattaa gcaaaatttg
     2461 tataaattcc ttagcacata agcctttatt actcccaata ggcgctgcta aaggcatgat
     2521 agccgcagct ccagcatcac gcatagctct agctgcgtaa agatcagcat gcatgtaagg
     2581 taagggtgta aaaccctctt tagctaaaag ctcgcaagct ttaatcgttt cataattatc
     2641 aggcaacaaa tacctactat cgcttatcac ttctatcttg ataagttctc cacaaccaag
     2701 ctctcttgaa agccttgcaa tgcgtaaagc ttcatcggcg tttcttgcgc ctgaagtgtt
     2761 gggtaaaagt gtgatatttt tagggatata atcaagtata ttagcaattt cccctgtatt
     2821 tgcacggcgt aaggctagag tgataatctg tgttttagct tcttctatag ctgattttat
     2881 aagctctagc gaatattttc cagaacctaa aataaatctt gaatcaaact cgtatttgcc
     2941 tatttttaat ttatcgtttt ttaaattttc ttgcattttt actccttatt tgctaaaagc
     3001 tctaaaacaa ggttactttg atgtcctgcg caaatattta cccttggcgc cataagtcca
     3061 tttcctagct tagcaccatt taccaaatcc ccacacacat agaaattttt agcaattttt
     3121 cttgtttgta tgctgttgct atcaccatag cccgcaagcc ctgaagcaca gattaaaaca
     3181 ctatctttgt aaaatctatg aaaattttgc gctatcatcg cttttgcgat agcactatca
     3241 aaggcttcac aaactatatc tatatcttta aacaaagatt ttaaattatc ctcatcgatt
     3301 tttaaggtac aaatttcaac gctgatataa ggattaattt cgctaatttg ctcttttaaa
     3361 gcttcggttt taaacttgcc caaatcactt acacgataag cctgacgatt taaattacta
     3421 ggctcaatca catcaaaatc aatcaacttt aaatacccca ctccacttct tgccaaattt
     3481 atcgctatat gtgatccaag tccgcctaaa ccacacaccg ccacgcgccc atttttaagt
     3541 ttatcgtgaa gctttggtgt atgtcttgct ctcatcatag catctagtgc gtcttttgga
     3601 ggtaaagtat ttttttctat acaaaaaagc tcatcatttt catttaaagc gatattctct
     3661 tttgttgcaa aaccattgat aatccataca tcattttcat ttttgctgat attttcaaaa
     3721 aattccaaac ttgttttaaa gtctgtatca agttctttgc cattaaattt tactctcatc
     3781 atccacctcc tacaaaactt acgatttcag ctttatcgtt ttcttttaaa atcaaatttt
     3841 caaattcact cttaggtata atctctccat ttaattccaa ggcgataagt tctattttca
     3901 agcctttttc tttgataaaa tccataaatt taagctcttt taactcaagc ttttgtccat
     3961 tgataatcat atttttcctt gtatttgctc ttctacttta atttttgcat tatctaataa
     4021 ttgtttagat tttttcctta aattaaagct ttcttgtata tattttgcaa ttttttcttg
     4081 agttgtagaa tctattttag ggataaggat attttgcata tctattgaag aaagatttgt
     4141 ttgaacccca cctgtaccaa ttctctcaaa ttgcatttta caaataaaag aatttaaaag
     4201 caataccaaa acatcactat taaaattttt aatcgaaatt tttaaaatcc tttgattaac
     4261 catagctgat atatcatctc taaccacaca agacaaacca atgctaccag acatagaaat
     4321 taaaatatca ccttttttta ttttatcttt agggcttaaa ttataagctt catttttaag
     4381 atagataaca ttgcttaaat ctagcgtagc attttttata ttattaatcc taattaatac
     4441 aagctctcca acatcttggt agtcatcact tgaaaatgca aaaccacttg aaatatcatt
     4501 aactaaatct tttaaattac aaaagccatc tttataactt ctaatcatct tttctatgtc
     4561 ttcatattta ctttgataat attcagaatc caatcttcct gtttttagaa aagattcttt
     4621 taatgtgtgt atagagatat ttggtgagtt tgtaggatta tttgttttag aatctagcaa
     4681 actttgcaat ggattctttg gatcaagtcc taactcaagg tataaagttt cctctgcttt
     4741 tttatacaac tccttacttt cttctaatgc cttatgagaa tcttttacca aattttgaat
     4801 ttctaactga aattccatag ggaaaatggg aattttaatt tcttttaatt cttcaggatt
     4861 tacatttgtt tgattaattg atggtctagc ccttcttctt atctcttttt taccaatatg
     4921 cgtatttaaa aaaactgtaa gatactctgg caacagaatt tccttattgc aaacaagcct
     4981 tactaaatat gaagcaaaaa caaagttttc tctattgtta taaaaaattc ctgttctacc
     5041 cacaaactca taggaatttg ttctattaaa caaaacatct ccataattta acctaaaagt
     5101 ttgcaattca tttttatcaa ttaaagcata ttttttgact tcaaaattac aaagcatatt
     5161 atcaatgtca ttcattctat aaatagggat accatcgccc tcttcattca tatttattga
     5221 aataccatat tgagatttta ataaacattc tcctattttt ttatagttca acttattgtt
     5281 ataaataagc ttcattgtcc aaaaactatc atctatgcga aaatctatat tttttttcac
     5341 ttcactaagt tttaatacac ttacttctaa atgcgggtat ttttcctgca aagtttggtt
     5401 taaattcatt ttattccttt ttttatttca atctaagtaa aaaatattta taattataaa
     5461 gctcaactac cggtggtaga aagagatggc tagcttttat gcttcttgca gatgcctaaa
     5521 tctgcaccaa acccctaaaa ccattcgcaa ttctttagct ctatatcatt tccgtttata
     5581 taatttctat atcttttttc ataaatattt ttattatatc ctttatctat gtagaaactt
     5641 gtcactaaaa atgaactact tctgcctagc ttttgtaaaa taactataaa attatggtta
     5701 tataaccaca aataaaaacg gattgcccgt ttctctttat aataaaaagc tttaatttcg
     5761 gaatgagtat gattgataat aatttgttta atccaattta ttctgcaagc tctttggcta
     5821 tcaaactccc ttgttttatt ttgtttgttt tctcgtgttg tgatatgcca aaatatcttt
     5881 tctttcccct tatgcttctt atgtgattgc ggatctatat aaatacaacc tgctaaatac
     5941 aatggagcct caataaagtc ttgtttgaaa attttataag ctaagtcaaa tttttcattt
     6001 tcacatttac aagtgctaaa atccaagaga tgatacatta ttattcacct ttacccaatt
     6061 gaatcctaaa aatattacat ttattttccc aaggtggcgt tcctgcatcc aattcaatat
     6121 ttgccaatgt ttcaatttta tttataatat aattttttat ttcacttaca tgctctatat
     6181 catttcttgc tttgtatgaa atagcaccta ttaacaaatc cacaagttga acaatatttg
     6241 attcatgtga ttgaattgta aaaattttta tatttactga ttgtttaaat ttattaaaca
     6301 aaactttttc caatcctttt attttatctc cactcttcgt atctttataa tcaagatata
     6361 tttttatttt tgtatcaata tctattaaat tatgcaatgc ttgataatac attttataat
     6421 aaaataaatc atgatctcct tgattgtaaa tatcatgttg cagaatggtt ttatttggaa
     6481 ttaatacagc tttaaaccac atatatacag aagaaaaaaa gaattctaat aattcatcat
     6541 aaaaaccttt ttgacttaaa tttagttttg tccatttaat ttctttatta tatttatatt
     6601 tatgctttaa atatttaatt gttttattaa ttttaataat ttcagatgat ggaactttaa
     6661 gcgctcctaa taccataacc tttgaacaca aagttggatt atctttgtaa aataaatgat
     6721 tgctttcatc gcaaaaaatt ttaaattctt tcatattatc cattcactta ttctttccaa
     6781 aaactcaaat tttctgcttt tgcaaattca ataaaagctt cagctatgcc atctttttgc
     6841 aagtctttat atttttctac atttaatcta tattcttgta ttcttttgtc aaactcttct
     6901 tggctttcat ctttttgttt tataggctca tctccttcta aatgcggatg aaataaatca
     6961 tgttttacta ctaaatgatc atgagaatct aaaagtgggt aataaatctt ttcgcctgaa
     7021 ttatctttac taggctcatt catagtagca aagaagatat tatagtcctc acactttgga
     7081 cataatttat catcccattt ttgtaaaaat aaaacacttg tttttgtccc cgtgtgtggt
     7141 ttaaagacat ttccatgaag tcctacaacc gctaagattc tagctttttg tgcgataaat
     7201 tctcttatat atttatcgct tgaattatta aaacgccctt gtggcaatac aatagccatt
     7261 ctaccaccag gctttaacat atctaaattt cgttcgataa ataaaatatc tcttcctacc
     7321 ttactttgag gtttgccatt ttcttttttg cctagctcat atctagctaa aattctactc
     7381 tcttttatat ctcctgcaaa aggcggattt gccattaaaa catcaaaatt aaaatcccta
     7441 ttttgatttt tagttactct taaatttttt aagcgtttaa aaccttcaaa atacacatct
     7501 tgccaatctt catcatcttt tacccactca tcccatctat caaagtcaat ggaatttaaa
     7561 tacaaaacat ttgtatgccc atcacctgca attagattaa gcatttttga tacgcgcaca
     7621 ctcttttcat caaaatctat accaaacact ttttctttta cataatcttg acactcagaa
     7681 atcttttctt gggctgtaaa gagatgactt gcttctatgc ctctttcttt ataaattgaa
     7741 cgccacacat aaaaacaagt atgtatcgga aatccacaac ttccacttgc agtatctatc
     7801 atactttcat cttttttggg atttagcatt tttacacaca tatctattac ataacgcgga
     7861 gtaaaatatt gccctttttc accttttgag gatttattca ctagatattc aaaagcatca
     7921 tcaatcactt ctaaatttga gttaaataac tttacatttt gcaatgatga tacacataca
     7981 cttaggtgcg aaggagaaag tttaattttc tcatcattat taaatacacc ttcccatttt
     8041 ttctttgctt tatcaaagag tttttctatt ttttgcttaa gttcagaatc agactctcca
     8101 taatttctaa actctaagct ctttgttcta tctcttgcac cctctagctc atcaaaaagt
     8161 tttataaata taagcttaaa acattcttca aatacatcaa ctccagcatt tgccaacacc
     8221 tcatcttcca tttctgtaac taaattcttt aaacttcgct tttgactttt taaaatatct
     8281 tctttaatca aatcatcaaa ggtaattttt actttcaaca gatccggtaa tgtctggttt
     8341 gatgcaggaa tatttggaat agattcaaaa taatttggat cttttctatg ataatagcta
     8401 atttctttac cattacacca cacagccata gttgcacctg tagcattaca ataacttttt
     8461 aattgttctt tgctatcttt caactttggc ttttttactt ctataatgat gtatgggact
     8521 gtgatttgga ttttatcaat tatcacaata tcagcccttt ttacttcgcg tccaaaatgc
     8581 acaccaaatt caatttttat catatcttta ggatagttat attcatttaa aagcttatcg
     8641 atataaagct gacgcacaat ttcttctggc gtaagtttaa tttctttatc gcggataagg
     8701 caattagtat agtatataat ttggttattt ttgtttgttt tagctataat tttagtttcc
     8761 aattcagcaa tagctttttt actaaataga tctagcttgt aatcactatc ttttaaaatt
     8821 tcctcaatca tcctaaacct ttaaaaattt tctatcaagt ctttaaaaac aaggcaaagt
     8881 ttttcaaatt cttctatgct tactctttca tcaatagcgt gaattctatc attacaaacc
     8941 ccaaattcca ctacttttac accatatttt gcaaaatacc ttgcatcact tgtgccgcct
     9001 ttagtattaa gctctggcac ttcatgagtg attttttgaa cgctttcatt cattttttga
     9061 acgattttat tatcgatatt tgtcaaaaaa gcttcgcttg attgttttag ctctaactca
     9121 tagtttaaac catgacaaat tttttctaca taacttttta catcttctaa gcttgtatca
     9181 ggggaattgc gaacattaaa cataagtttt aaatcatttg gcgtaacatt acacaccccc
     9241 atacctccgc gaatatcggt aataacaatt tttgaaggac taaattcagc actacctgga
     9301 tcgagatcaa aacccgctaa aagctttaaa actggtgcaa aatcatgcac aggattgata
     9361 catttttcag gataagcaac atgcccttgt tttccacgga ttaaaagttt tccattgata
     9421 gaaccacgac gccctatttt aatactatcg ccgatttttt taacacaggt tggctcggca
     9481 accacagcat aatcaggtaa catatctctt tcttgcatcc attctaaaac agccttagtt
     9541 ccatatatag cttcaccttc ttcatcactt gttaaaataa gactcagtct tgctccttta
     9601 aaatctacat tctttgccgc atctacaaag gctgctactc cgcttttcat atcttgagca
     9661 ccccttgcat agataaagcc ttctttttcc ataggcacga aagcatcgct actccaaccc
     9721 tcgcctgcag gcaccacatc tacatgccca ccaaaagcta aatgctcgcc ttcatcttta
     9781 aattttttag tgagtaaaag gtttttaatg ccttcttttt ctatgaaaaa agcttcaaaa
     9841 tcactcagtt ccatagcgat gaaatttaaa gctccatcat catttggcgt aacagattta
     9901 aattttaaaa gttcgattaa aaattctttt gcattcattt tttatcctaa gaaagtttta
     9961 tataataaat taagagcaaa atactctata attatagctg aaattatatt gattataaaa
    10021 acaacttttg cactaaaaac ataactatat cttgccacca caaaggctaa agcacttacc
    10081 caaaaaagta tagccacaac aagtcctaaa gtcatcaaat aagcatgatc gctgcttaaa
    10141 accacacttg cagcactaag ccaaaatcct atcacaaaag gatttgaacc atttaaaaaa
    10201 gctcctttaa tataactttt caaaagactt tctttaaatt ctttatgctc taaatttaag
    10261 ctttctttct tttttcttag catcaaatac gccatataag ttaaaaaaca aaaaccaaaa
    10321 atcgccaaaa aacgcataaa aatgacattg tctaagaaat ttaaaagccc aaattgaagc
    10381 aaaaaaagat aaagcatatc tatactaaat gctccaagtc ctacagctat ggaattttta
    10441 aaagctttta gtgcataagt taaaatcaaa atatttacag gtccaaaagg cacactcact
    10501 ccaaagccca aaaaaactcc acttaaaaaa gaatcaaaca ttaccatctt tcataaaatt
    10561 ttctatatca agtgcgattt tatcaatagc gcttataata tcttctatat agattttatc
    10621 aaaatatcgc tctaaattca catctttttc ataaatattt aaaatacttt tttcacacat
    10681 tgaagcatac tgccccacag gcaaaaccgc cccacttgtg cctatgctaa taaataatga
    10741 agtttgatga agtaaagaat aaagcgtagc ataagcagga gcttgctctt caaacatgac
    10801 tatattgtgt cttaaatcct tacttttgca ttttgggcat tgtttatctg tgaatttttc
    10861 atagcctata ttaaaaattc cttcacattt taggcaacga agttcgggca aaaagccatg
    10921 caaatgtact acatctttac accctgcacg ctctagcaaa tcatctacat tttgcgtgat
    10981 gacaaaaagg tttttacccc atttttcttt taactgtgcg attttttcat gggcgtgatt
    11041 tggctttaca ttttgaagtt gtgcccttct tgcatcgtaa aaatcaagta cttttttagg
    11101 attttttcta aaacctgttg cagagcaaac ctccatcaca tcgtattctt cccaaagtcc
    11161 atcattatct ctaaaagttt taagcccact tggagcagac aaacccgctc cgcttaatat
    11221 cataatgttt ttcatcgcta aaccttataa aatttacaaa gtttagcgaa aaatgcttta
    11281 agaaaataaa tatttttgca agattttttc tttttctttt tctaatctat caagttctat
    11341 tttatattca ttgatttttt tctcaatctt gtcagttata tctgctattt gatcttgaaa
    11401 ttctaaagaa ggaagtttaa ctcttaatgc ttttattcta tctattgaag ctctaagttt
    11461 tcttgaaaat ccttgttttt taccagcttc atttaaaata aaacttatgt atttagcatt
    11521 tatttttgta tcatcaaccc ttaatacccc acaatgatca gttggataaa actttttatt
    11581 ttttggtata aatcccacca tccaatctcc atctataccc cacaaaacag aatcattatc
    11641 ataatcttgc aaaatttctt tattaacaaa tccaaatact tccaacacat ttgcactata
    11701 aacaggaatt tgtccatttt caagcagctc attatttaaa actctttttc caatacttag
    11761 tttaaaaatt ggatttgata aagcatattc tttaattgtt ttattaaatg atgataaaaa
    11821 ttcactatcc aaatttattt tacataaatt attaatttta tctaaaatag aatttagttc
    11881 atattcttga ttgtcctcta taataccaca tttttgaagc attgctttga ttaggttttg
    11941 atactctttt atactcaaac ttaaagtatt atactgctct tctatctttt cacactctgc
    12001 tacgatttgt ttttgaattt caagcggtgg ttttggaata accatatttt gcaagattcc
    12061 taaatttata ttttgttgcg aagttgtaat aacttcgtta tataattgaa atttaaaata
    12121 atcaatagca tacataagat atttatttat aaattcttca tttggaataa tagctactat
    12181 agcttgattt gttgtcatat cttcgcctaa tattccaact ctaccaatag ttgcataaat
    12241 tgaaacaaca acagcacctt tttgtatcat ttttgcatta gaattcttaa aaccctctct
    12301 tgtaattttt tctttagtat ccataataac ttgacgatta gagtaatcgc taattgttag
    12361 ccacttaata tccccattcc aataatttat attttttctt gatggtgttc ctcccatgaa
    12421 aaaatctcca caaattttca atttaaccaa tgggtattga gactttattt cttctctttg
    12481 agtttttgga tttaaactta tagctttatt aaattccact ttttcaaaat ccatcatatc
    12541 aataagcctt gcttttgtag cataaatctg caattcttgc gggataacat caagcgtatt
    12601 taaaaaagat ttgtagatta aagtattaag cttggtctca ttttgtggat tgcctctttc
    12661 aaaaagtggg ctcaaataag gctcgtgcaa ttcttttaaa ccttcatcac cttttctatt
    12721 actccactca taacctaaaa atttcttttg ttcttttata tcacttgggg attttatgat
    12781 taaaacttct tgattaagac ttagactaaa ataaagcaat ttatcctttt ctattgcctg
    12841 agcataagct aaaaaggctt tatcttctaa atcttgctta tctttacttt ctttataaat
    12901 tttagattct ttaagttttt tataatcact tgtttgccta aatgcattgc gataatcttt
    12961 aaaggcttct agctctgtga gtttagaatc taagtttcca tttaaaaaat tgctataaag
    13021 ctctttatca aattttctaa aatcacaata cgcacttaga taattttgat aaaagctttc
    13081 attgtctttt aaattttcag cttctatgcg ttctttaatc aaactataat cttgagaaat
    13141 aagatgattt tcttgtttaa aagtttcttt tttgcgtaaa aataaaataa tcgtatttgt
    13201 ccctgttgct ccaaatgttt gattacctag ctctacaatg gcaataaaat caaaattttg
    13261 aaataatatt tctcttgtat ttttataaat agaatcttta tttaaaatag aacttggtaa
    13321 gataatagca gctttagcat tatcatttaa aatttgattt gctcgctcac aaaaaaagca
    13381 ttcgatagaa ttatttgttt ctatgtttat atcatcgttg aaaagtttat aagtattttt
    13441 agatttatca cttaaagttt ctaaaaatcc ttttacagaa taaggcggat ttgctataag
    13501 caaatcaaaa ctatttgatt ctatttgtgg ttttgctttt tctccttcta aattatttgt
    13561 atttgctaat tcaaaagaag caagtgcatc agcgtataaa atattgattt cattttgccc
    13621 atacattgca cttgatacct tagaaacctt acttaagcga tactcttttt caataccata
    13681 aatattttta taatgctctt taagctcatc ttctgttaga taacgcttaa gctcattggc
    13741 ataggtgttt aaaaaatgtc cagcaccaca agcataatca accaccctta aagctttaga
    13801 gtttttgctt aacatttcgt gaagcggtaa agaatacata ataaattcac aaatttgaat
    13861 aggggtaaaa aactgacctt cgtcttgctt catacctttt tgcaaaaaaa gttcaaaaag
    13921 attgcctaaa aattgatttg tagagttttg agtaagcttg taatttgcaa aaagctctac
    13981 tatttctttt aatacaagtg cattttttaa gaataattct ttattatgca cttctaaaaa
    14041 tgcaaaatca ttatttgaat aaaattttaa ttctttgatg taattttgca ttacttcttt
    14101 taaagttttt gtaaggggta ttttaaaaag aacatgtaac tatccctaaa taattttagc
    14161 aaaaatccca aataatagga ttttaaagct tacaaaaatg actttttatc tttcctaatc
    14221 taaagcgtaa aatatcccaa atatcccaaa atgtccgctt tgtcccaaaa aagtgattaa
    14281 atgctgttta aaagatggat aaacacgagc tttgctttta aattttatat cccaaaagtg
    14341 ttttttaccc tctaggatag ttacattttt gcttaaagta tttttatatt ttcttattga
    14401 tgtaactatc cccataaaac actatataat catagtttaa ccacttttta tataaaaata
    14461 gcatgtaact atctatggca ttaagctttg gaagatagtt acatagaaaa cttaaaaagt
    14521 aatgaagcaa ttttttatga aatcttgtta aaaaaatagc ttagtaagat gtttttaaat
    14581 atcaatttag agagcttgaa gttagatttt tcaagctctt atattaaaaa tctttcaaat
    14641 caaaagtttt taattgcttt ttgaaatttt atgtttaaat tctttgaagt taaaatcaaa
    14701 ggatttaaaa tgcaaatgca agaagtgatt gaaaagttaa aggatatact tgcgagtgaa
    14761 ggcaaaagag atttaaaaac aaaagatata gccaaagaat taggaatcaa tcctgatact
    14821 tttaattcca tgaaatttag aaactccatt ccttatccac aaatcttaaa ctttttaaat
    14881 gagaggaata taagcattaa ttattttttc tatggtgtct ctcctaaaga tcaattagaa
    14941 tgtgagaata aatataaaat tttaaagctt tataaaacaa atgcgagttt aggcggaggt
    15001 ggaataaatg atttaataga ttgctctgag cttattgtag atgaaaaatt attaaacttt
    15061 tttggtagta aagagtgtga gtttatcact tgctatggag aaagcatgga gccacttata
    15121 aaagatggaa gtatttgtgt aatagataga aataaaactt ttaagaataa aagcatttgt
    15181 gtgattaata ctagagatgg actttttata aaacaagttt taaaacaaga tgatggagtg
    15241 attttacact ctttaaatcc tttatataaa gatatatttt ataaaaatgg agattttttg
    15301 ctaattggtg tggtaattgg agaactttct aagatgtaac agtacacaat aagctaagtc
    15361 aagctaatct cacagagagt gtaaaacaca aggttgttct atcaaaaaag gagataaaca
    15421 tgaaagatat caaaaattac accgataaag aattaaaaga aaaaatcata caagatttag
    15481 agagtgaatt taggattttg tacaaaaagc ttttaaaaga aaaagattat cttgctaggg
    15541 ataatatatt agagcttatg actatttata atatgggcat aaactcttat tcaatcgcta
    15601 aaagatttga gatgaatgaa gataaaagtc ttatacaagt tcctttgttt gaaagatata
    15661 ttataggtag aaaatttgta gttaaatata atgatgaaaa acaaagatac gaattaaaaa
    15721 gtaccttttg tgaattttaa ggagaaaaga tgaaatatcc taatgtttat gtgaaattag
    15781 ttggcgaaga tggcaatgct tttagtattc tagcaagagt aagcaaggct ttaaaaaaag
    15841 caggtgtaag caaagaagaa ataagtaaat ttcaaaaaga agccatgagt agtgattata
    15901 atcatttatt aaatgtggtg caagattggg ttaatacaaa ttgatttcaa aaagatgtca
    15961 aacaacagca cacattcagc caagcgaagc taatcttgtc ttatcaaaac aaaaggagat
    16021 aagatgagta aagtaatagt agatatcaaa aaaggtttta gcaagacttt tataaacgca
    16081 atttgcaacc ataacaatga acttgtttta gaatatctta aaaatggtat gagtgcaact
    16141 aaagaatgca tgggcgaaga gcctatgttt tatgcaataa ctcataataa ttttggagcg
    16201 attttgcttt tattaaaata cggtgctatt ttagataaaa attacctaga agaatacaat
    16261 aaagatttta gcaaagaagc tctaaagttt ttaagctctt tgctaaaata aaagagaata
    16321 taaaaatatt ctcttagctt ttaaaaattc ataatcaaaa gctctttact ttcttttctt
    16381 tttaaaacat tattatttaa agaatacctt atttttaatt ccttaatatt aaaatcttta
    16441 taaagctctc ttataagctc acaatcatta taagaaagca taaatttacc cttgatattt
    16501 ttaagcaaat tacataaaag ctcgtgttct tttaagccaa aacaaggcac atttttataa
    16561 taactctcag ttccaacata aggtggatct aaataaaata aagcttcatt gtaatcatat
    16621 tcttttaaaa tatattcaaa gcttttattt tcaatactgg catttttaag tctttttgta
    16681 tgtaagctaa aatccctaca taatctcttt ggtgctcttt gtttactcat agcaaattgt
    16741 cccatacttg aaccaaaaga agtactgata agataaaaat aaaaagcagc cctttctaag
    16801 tcattttttg gcttgatttc tttattttta agcatatgaa agatttttct acttattatc
    16861 atagaattaa gcacatttgc taggctttgg ggtttatttc ttatacaaag atgtaaatta
    16921 ataagctcgt cgttaatgtc gttaatgact tctatttttg aagcactttt ttgataaaaa
    16981 acacttaaag ctccaccaaa gacttcaata tagcttttat gctcaggcat taaagcgatg
    17041 atttctttag ctaaatagtt tttaccaccc acccaagcaa acggagcttt tagtgtagtt
    17101 cttgtaggtt tagtaagtgt gctagttttt agaaatttgt ctgtattatt tttcatacaa
    17161 actcctttca aaataaaatt taaaaagcta gtctttaaaa ataaagctat aatgcttttg
    17221 ctagttttta gaaaaaggaa ggctttagtc ttccttgcca ttcttgctaa cactttttga
    17281 aaaattgcga ttttccaaaa agtcgcatca ctaaaggcca cgcccgacca ttccttgcta
    17341 tgcaatgccc catattgtca cttcttaaca attttttcaa taaaatcctt agtatcttta
    17401 taaatcacac ttcttatact tgggtgcaag actttgttat tatctatggg taaaaaagct
    17461 ctttgaggaa tttttctttt tctgtttccc cattgatgaa cataaccata tttaaagcca
    17521 ttttcagtct gtatattatt aaagactttt acgccacttt tagtaggttc gctttgccaa
    17581 tttaaagcat tgcttaattc tccatctctt tttaaaattc ctttattctt accatctttt
    17641 atcttttgtt ttatggtagc tggttttaag cttttccatt ttccattaaa aatactgcgt
    17701 tcgtttttaa aagagtctat aatgctattt cttatactct ctccagcacc cgccataatg
    17761 ctttgcccgt gtttatccat atctattaat ttatcacaag ctttaaaaaa gttttcaagc
    17821 ccttttattt ctatatattc actcatattt tatccataaa ttgtagtgtt aattttgttt
    17881 tgttcttgct ttcttaaagc gtcgaataca cttttttgta tagcatttgc aaattcttgc
    17941 atattaaaat tgccatcttt agttgctatg ttaaaagtgc cattaacact tacattgata
    18001 ttgccattat taaagcttgg agtatgattt atactttttg tctcagctaa ttcatcttta
    18061 taagtgtttg tagtaaagac tttttctttg ttttgttcac tttggcttat cttaacttct
    18121 tcatcatctc caagccctat aaaatcaaga gcatctttta taaagccact tatagatgag
    18181 atcatatctc ctacccaaga aagcttagaa gcaaaccaat caaataaaga accaaaaaca
    18241 ctataaaaga aatccccaac accttgccaa atagaattta aaaactcagc taatggagaa
    18301 gcaacgctca taataatatc tttaaaactt gtaaatacaa gggcgcattt atcaaatact
    18361 gctttaatga cattgtatat aggctcccaa acaggtttaa gccattctat aaaagattta
    18421 aaccaagact taaccttatc ccaatttgca ataataagcc cagccactat tgcaatgccc
    18481 cctaaaataa gaccaatggg attactcatc atagccacgc ttaagactct aatgccatta
    18541 gctacggctt taaaaacttt attaagccca cctaaaacaa aagataaggc tttaagggag
    18601 gttgtgtaaa tagtagttgt gacggttttt gcttttaaag taatattaga taatatacaa
    18661 gaattacgaa aagctaaaag atgtattctt gttttaatca aagcactttt aagtaaaatg
    18721 gtgcaatctt taagatagtt tttagcaata gcataagcta agactgcagg tttggcgagc
    18781 aaaaaagtag ctataagtcc tcctaaaacc ccattaagac cagggacaag tcctgtaata
    18841 taagtgatac tattaacaag ataagaaatt ccagcactca cccatgatat tgcaggtaaa
    18901 aaaaccgaac ctaaattaac agctaaggaa ttaaaagcat ttttcattaa tataatagaa
    18961 ttttcagtgg tagcagccct tgtatcaaat tccctttgta aagagccttt ttttgcttca
    19021 tcgccagcat tttttaaagc ttctttataa gtgtcaagcc ctccaacaag agttgccata
    19081 tcatctgcaa attcacgacc aaaaatatca actaaaacgc ccatttgttc tttttggtct
    19141 agttttgaaa ttctttgtaa aaacatatct aaagcttttt gaggatcatc aaaactggct
    19201 tgttttaaaa atgctccact tataccaagc tttgcaaaag cagattcagt tttagttccc
    19261 atattatcag ctgtggctaa aacgcggtaa agactattaa tagctgttcc tgctacttca
    19321 ggtcccttac ctaaagatat aaaagaagag cttaaagccg caatttgttc tttagtaaat
    19381 cctatttgct ttccagcagc tgcagttctt ttcataacat caataatctc tctagcctta
    19441 gatgcactat tatctgaaag attattaata ctatcaccta aatcctccat gtcttttaaa
    19501 gaaatgccta aaatattttt aattttcgca acgctatctc ccacatcttc agcgctcata
    19561 tcaaatgcca ctttcatttt agttacaaga tttgtaaatt ctcttacatc ttttgaacca
    19621 agtccaatct gtcctccagc agcagctata gctgctaact cattggcagt aacaggtaaa
    19681 gtttgagaca tcttaaggat atcagcactc atttttttaa tatcatcgcc ttcatcaaaa
    19741 ttcacaacct ttctcacatc agccatagca gattcaaagc tgatagcttc tcctaaaccc
    19801 ttaccaataa ttccacctcg aataacatta cctaaactta aaaactcatc ttgcaaacct
    19861 tttctttgag cttttaattc cgctcttaaa ttggcattga gtttaagagt gtttaattct
    19921 ttttgcaatc cactaatgcc gagtttagtt tttgctgcta ttttttctaa attgctaaaa
    19981 tctttaacta ccttgccaac cgcacttgcg tttttaatcg ctagtcctaa aataacacca
    20041 attccaatac ttccagcatt ttccatattc aacccttttt aagcgattgt attttaaaat
    20101 ctttactatg aaagttttaa aatttattaa cgatgatata atttcacata ttgccttatt
    20161 attaacaacg ctcatacctg ctttttacat aagctatcaa agtgcaagtg atggtttttt
    20221 taatacaatg gctattttta ttttttctta ttttgcaagc attatcataa ctgctatttt
    20281 agtgatgatt atgccaccca ttgctttatt gcttatttta cccacttggc taattgtaat
    20341 aagtttagat tttattcttt ttgctatttt aaaaatttat tttttgaaaa ataaaacaat
    20401 caaaaactct tagcctttaa aaattctttt gaaatttcca aagcttcttc aaactcatct
    20461 aagcttaaat ctaaaacttc atttaatccc caatgcaaag tatgacttat aagagctata
    20521 gcctctaagc tataactcct gcttctacca aaaaatcttt aagagcgtcc tgtaaagctt
    20581 taaaatcttt aagattcaaa tcttcaattt cactttcttg cttattggta agtgcagcta
    20641 tcatacaaat agtttgctcc atttcttttt cacctttatt agtggcgttt tttagcacac
    20701 gcacatttgg ctctctcatt tttaattctt cgccattttc aagtttgatt attttttctt
    20761 tcatttttct ttccttttta tccttcttta tggcggaagt aattccgcct aagaagcaac
    20821 taaaggcttc cccacccatt gctacgcaat gcccaagaag ccaaacttta atcctaaaat
    20881 cccagtattg ttaattaaac tccgattaat cagtgtttaa agggttaaat tgcttcttac
    20941 atcactcatc atatccaccc catttatcat taaaatagtg tttttatgat cgtaggtaat
    21001 gattggaatg ttattgcggc gttgcatgta aaaatgaact gccattttaa tttcagcttc
    21061 cacctctttt ccactttcat gatcactttc acttatgctt ataaactctc ctaaaaactc
    21121 agcactaata ccatagtttt ttccaccttt gtgaacactt tctctaaaaa gcaaaggagc
    21181 tttaatctcg ctaaaagtag tatgaaagaa agccgcataa agcactggat caacaacggc
    21241 taatttaaag ctaatttcta aaggctttaa aaccccgcta ctataatttg ctcctaaaac
    21301 tcctttggtt tcaatcatct cttgttctat atcaggcaat tttaaatttc taaccactcc
    21361 aagataacct tgaccatcta tataaatatt accttcctgt ataacttcgc caattattct
    21421 tttcattttt attttctcct tgtaaaaatt tattaactat cagcactaat agttttaatc
    21481 aaatcactcg cccatttatc agagtagatg aactctaaag tgatttgttt aacgattgga
    21541 ttattcatca tttttatatt tagataaaac ttaccagcac tcacattggc atctgtgttt
    21601 ctttcttcat cccagcttac ctcatagcca attaaaacct tagctccttt taaatctctt
    21661 agcaattctt caatgctgat ttttataaaa tataattcac ttgctttttt atcaatagcc
    21721 ttaaaagctg ctttttgtcc tgctagggct atacgatcaa aagttcttac acgagctaaa
    21781 tcttgccaaa tcgtatcttc atggctagtc tccccacccc aagagcgata accttcactt
    21841 aaaatacaag ttgagatgtg agcatttctt aatctttctg catcacaatc aaagccattg
    21901 ataaactcta taaaatgctc tgtgccagta accccattca tcactctatt tgagtaagaa
    21961 tcactgaaac catattcttt atccccatct gtatgggcta ttaaacctgc gatgatagga
    22021 gattgtggaa cataagcgta ttttccttgt gtgtttaaga tttgaacctg tggccaagtg
    22081 gcaattaatc ttttagagct aaaagcctcc attgtattaa tagcttcgcc aacatttgta
    22141 gcgtaaagat ccacaatagc tgtgatattc atagaacttg ccacactttc aagcttagcc
    22201 tttactcctg cttcatgtga gtaataagga gtaatgatta aatcaggact aaagcctgtt
    22261 ttatgtttgg cttttttaaa ggcttctatg gcattaacaa tattggttaa agtgttttca
    22321 ctttcctcgc tttcttcaaa aaagctgacg attataacat tgcttacatt ttgtaaattg
    22381 atacattcta aagtatctaa aagtctaaaa tcttgtaagt tattttcttt gattaaatcg
    22441 tttacaaatt cttttgcttt gcttacattt gaaaaggcaa agattggaaa gctatccgcg
    22501 ctttcataac cagcctttgt gtaaatcatt tctttacttg caccttttat agccccagca
    22561 ataccaatag gcgtatcact ttgcacttta ataggacttg ctgcaccatt actgatatta
    22621 aaattaactc cataatttgc tgccattatt cactccttat ttctttacat ttttttgtat
    22681 ttttttgttt ttttaggatt taaattaagc tcttttttca taacaatttg atcttgttta
    22741 gaaatttcaa ataaaaaggc ataatctcca taagtatcag aactagcttc taacttttca
    22801 acattaaaat cttcactttg aatttcttgc tcacctataa aaatggattt ttttactctt
    22861 acattggtaa tttctgtttg accataatat ccattacctc tagcaaaaag cttattaggc
    22921 attggtgtat tttcaagttc tatgcttacc tctctacttc ctgaactaga ccataagcaa
    22981 cactcatcag cgccaccatt atatttttta aacacatggg caattttgtg ataggtttct
    23041 tgataaatcc cacttgtttt aatcgttcct acaatttgat tatctgtagg agtaggatta
    23101 gaatctatag taaaatcact cctattaagc ccattgccat ctttagtcat agtaaatttt
    23161 gcgttttcat attcatcttg aactttattt ggagtagcaa aaccattttc aaaaccaagt
    23221 cttaaatcac tcatacaacc cccatattgt ccacctgttg tagtgttatc aaatgtgata
    23281 atgatttttt ctttaggggc aatatcattg ctaccatctc ctagtaaatc aacccagctt
    23341 gtaaaatcat tatcattagc agtgcaaata aataattgct ttttactttc tacaaccgcc
    23401 caaatttctc ccactttagc ttgtgtattg tagttaggtg gagtttttga tatttttatg
    23461 tttgtatttt ggaaattttg atcttgtaaa atttcctcaa tgagactttt aagctcctct
    23521 ttattaacaa gctcttcttt aaaaagtttt agttttttat ctataagctc attaactttt
    23581 tgagcattaa gcttatcact aactataggt tcacttggct cttttgagcc ttgattaata
    23641 tctggaataa aagaaattcc ataatctttc attttaactc cttttttatt gatttaaaca
    23701 cacactttat tgcatgataa agattgcaag aatgataaaa tacaaagatt ttaaacttag
    23761 aacatccaag caaagtcata gcttctttta atgctaaatc agctgtccta taatcagttc
    23821 ttgaatttgc tttttcgcat aaaaaatcat gcaccacaca agcgctaaaa tactcacttt
    23881 taaaaggtgg aaacaaagac caaaaaaggc gtgggatact tgcaccatca gttttaaagc
    23941 cttgtggtac aatgccttta taatttggca aagaaaaagc ataatcacta atcacttcaa
    24001 acctgtcctt atcgtatggc tttacacaaa ccctttttaa ttctgtttta gtcatttttc
    24061 actctcccaa acaattaaat caagttcttc tttgctttgt gcatttctag ctttttcttt
    24121 taaagcactt gctttaaaaa tagtttcttg cacaaaataa gccatgctac ttgcaaagag
    24181 tttaaactca tctacgctaa atcttgtagt tgaattatca agcgcaatcc aatcaatata
    24241 aggaattaaa ttaggattaa caagagcatt ggttactgct ccattaattc ttaactgatc
    24301 ttcattagaa ctttgataga ttttaccttt aaaagaaaat ccaccattta gaatattttc
    24361 tttttttgca ttaatctcgt tgatttttaa ctcttttgcc tcgtttaaaa gctcttcttc
    24421 gcttttagga ggatttatta aagagttaaa ttcttcttcg ttaataggtg ttaagcctgt
    24481 tttaatttgc tcatcgctca cttcatcctc ataagcataa atttgattat tatcgttttt
    24541 gtctataaaa tatttcattt tttctcctta tttgcttgat gcttatctaa gctccataaa
    24601 agatacaatg cttttgcttg ggtaaaatcc gctgtgttct ggtgtattta atctgtattg
    24661 cccatttggt ggaatgattc caaaaccaaa ataagttcga cttactccac cattggataa
    24721 tgaagtttga aacatagaaa ctacaaattg ctcactacaa gaaaaactga cacccccact
    24781 tgcactagca ttaacttgaa atttggctgc tatgggtttt cctgtattat ttgtataagt
    24841 tacatcaaag gctcttgaaa cattttgcca agcttgattt actcccaatc ctcctattaa
    24901 gctaggagct tgttctttta aggtagctaa atttacaaat tgattgtcat ttgtagcttt
    24961 tatagagctt gtaggtagtt tggtaaagtt tttagctcct gcaatggttt gattagtagc
    25021 taaagtaaca tatttggcaa tttctgtatt aaatttattt tctaaaagat atttagaaag
    25081 ctcatcccat acttttttaa actctgcatc atatttttgc gttaaagcat caattttaag
    25141 attgagttcc actttaatag catccacata atcacgactt gccatgatta cactaggatc
    25201 tagttttaaa ataacttcct ctgcattaga aagctccatg acaattttta tcataagctc
    25261 tttagcgctg ccttctttta agataggttt ataagtgcgt gggacatttc ctactgcaag
    25321 caaatctcct gcttcatcat aaatgcctac tgcattaact tcaaacccgc ccacatcgct
    25381 tggcacatga cacattaaat tcacatagtt tggattgctt tcatccacgc ttttgctact
    25441 aatattagct tcataaacaa tctcttctaa gctttgcatt tcttcgctgg gcaaaataac
    25501 ttttgaactt aatttaaagc tttttaaatt gataccattt ccacttgctc ttgcggcaat
    25561 aaatttagca atgccaattt tagttagtat ggtatagtat tcactttttg ccattaatac
    25621 actcctttaa aatcaatatt agttcttgtt atttcacaaa taaaaacacc cattgcattt
    25681 aaacttggtt tctgattgtt ttcaatttgc gtggtttgaa aaggtaagat ttctatagtt
    25741 tctccactta tttgtgcatt agcattaaaa ctatcatttt tactttcaat ctctatttca
    25801 atcgcttcta aaacgcttct aacattttta aaatcataaa ttagtctttc taaagtatta
    25861 agcgttcttt catcaaagct aacattagtt gtgcttactt taactttaaa aaaataaggc
    25921 tttccaccat aattaaacca ctctttaacc actgcagtag gaaatacggc tcttaaagct
    25981 tcttttatag cccaagttgt gccgttgtat ctgtctaaaa gcaaggcttt agatataagc
    26041 tttcttgctt ctttttcatt taaaccatca atacttacat cataagcatt ggctaaaatt
    26101 ggcaataatc tttcatcgca atttagagct agatttgtga tactagataa atttaaatct
    26161 tcaaatcttg ttttagcact taaatcaata gccttgcttt gttttggatg gtggtttagt
    26221 attagtgtat tcatagcacc gccttttcat aactaagtga aaagctaagg gttgcaaact
    26281 catcatcagc tattattata ttttctaagg gcaagtcttt taattcttgc tcttcttcat
    26341 ttatgatttt ttctttaatg cttaaaattt cgcttttata aactccgtct tgatgaagac
    26401 atttataaat aaatcccagt gctaaatcca cacttaaatc aaagtccttt tgcaaagcat
    26461 taatcttttc acttatttca ttagcacggc ttaattctaa aagcaaaagt ttggcatcta
    26521 cgataaactc tcttttttta gctaactcaa cgctgacttc atcagttaaa ggtcttcgct
    26581 catccgcact taaatactct ttaaccacat caacgcttaa ttcatcttca cttttaatga
    26641 taactcttac ttttcctgct ccattgttta aagcttttat ggaagcgact tttgcacttg
    26701 cgcttaaagc gtgatagata tagccttttt cacttcctgc ggttgaaaag cgatgtacac
    26761 tcattatagc tctttctctt aaagcctcat cgctttcttc actggctcca ccactaaaat
    26821 attcaagttg tttaatctta gctacaaaag gcagtggggt ttgtaaaaac tcggttttac
    26881 tttctttgct ttgaataaat ttattaagtt ctaaaatacc ttgtgcttta ctttgccctt
    26941 ttttaatcac cacttcttct tttaaagtgg caaggtctgc tttttcattt gaaaaaattg
    27001 caccttttgg gatgatgaca tcataagtaa gtaaagtatt taattcaaac tctactttag
    27061 ctgtgggctt aaccccttta agcctttgta tcaaatagcc attagctact acattatcta
    27121 aatcacttcc ctttgcataa tgaagataag ttgcttttat actctcatta attcttgctc
    27181 taattatcat ttctctataa gctaaagctt ctaaaatggc tttaaaaggg tcagattcta
    27241 aaagctctac attatctttt aaaaagcttt taaaaagttc ttcataggct tttaaaagct
    27301 tttcataatc aagctcttct atgatttgtg ggtaaggaat gtcttttaaa aagctttgtt
    27361 taaaatagct atcatttgca cttaaaagct cactcatttg cctagctcca ttgttaaatc
    27421 cccataattt tcaaaaagca aggtaatgct taatttattg tctttacact cattaagtct
    27481 cacacctttt agctttactc ttttttccca ctttgaaatt gcttctgcag tgtatctagt
    27541 aagctttatc ttaaaatcat catcgatttt tctatctatg agtgtataaa gtaaagaacc
    27601 atattctggt ctcattactc ttgagcctaa aggagtgatt aaaatgtctt tgatactttc
    27661 ttcgatgctt accatgtaat tcattttaaa cctttgtaaa attcaaaaat gttttctagc
    27721 atttgcgaaa atcctaaaaa cataaaagct ataaaaaagc ctataaaaat gcttttgata
    27781 aaaaagttta ggtttaaaaa agcataaaat gcccccatgc aaaagagcat aaaaaagact
    27841 aatgaaaata aaagcaaaaa taattctttc atagtttttc ctatcttggc gaagctgtgg
    27901 caccacaagt acaagaatgg gtatgatttg ttaaatcacc tttgctatcg cttatatttc
    27961 cactaacttg taaattgcct attaagttta aatttccttt tatgctaaaa gtaccacttg
    28021 ccccaccttc gccacttgta gaaattgctc ctgcaatttg agtattacca tttaaattaa
    28081 tacttggagc gttaagcgtt atggtattag cgtttgtagt atgattttta gtatttaagg
    28141 tgttgttttg gttatgggtg gttttatcta cacaagtgat atttatattt ttaaccacat
    28201 caagttttaa agtgctactc ttagagttgt attctaaatg cgttccatct tcaaaatcta
    28261 tattaaaagt attttcatct gtgttttttg ctctatgttt ttcttggtaa agcccacgca
    28321 aaataactcc actatttaaa tccccacgca caggtatgac taatacttgc tctcctattc
    28381 ttaaaggaga aaagctcact gcataagaat tagctagact ttgaaaaaca cttaaaaaat
    28441 ccgttaccat atctccaata gcaaccttag ctttattgtc tttaatgtcg caaatgatgc
    28501 caagttcgtt cattatagtt tttccatttt tttattaatt aacttttcta caagttgctc
    28561 aattttaagc aatgcatctg tccccatata agctgcaaaa ccacccactg caacgctaag
    28621 ctttatgcca aaattaagat aatttacaat ttcaaaaact agatatgcca caaacataga
    28681 acctagcata ccttttaaaa agagtgtaaa tttacctttt aaattaagag ctttgcttaa
    28741 tttatttttt gttacaattc ctacaagtcc agctataaag cttactatca ttaaaaccat
    28801 atatacaaat atatcttcta atttcattgc tagttccttg taaaaatttc aaataaatat
    28861 aataaagcta atgcaaaagt tgaaaacaaa agagctataa gaagatcttt tgcaatgctt
    28921 ttttgattta tcattttatt attttctttc atctttctct cctgtgcaaa gcttggctat
    28981 attttcaact tctaagtaat acttagagat ttctttagca ctttctaagt cttttttgtc
    29041 taaaggcttt aaaggaagtt ttaaagggca tttaatagga actttaactt ctttgatttc
    29101 agttttaatc aaaatatctt tagaagcaca agcgcttaaa aaaacaaaag gtataattaa
    29161 taggaaaatt ctcattttat cattcacttt tttgctccta aaatattaaa taattcttta
    29221 taagctttaa gttcactctg gcagctttta tctttaataa aaaccttatc cacttttaaa
    29281 acttctttta aagtctcttt gggctttaaa tcaagtttta atttatcaat agctttattt
    29341 tgctgggtta atttatcttt aaaaacattg atttcattgc taaaatgcaa agctttaagt
    29401 tttagatttt cattttctaa agctaaagca ttgtttttta aatataaaaa accacaaaga
    29461 gcaattagaa caaaaaaagc tatttttgaa ggacttaaaa accttgataa aataaaacta
    29521 aacacaatct tttccttatg gataagtcca tcttgctttt ttgcctctag tgtctaaatg
    29581 tacaaaccca gcataaggat cattaaaatt atgctttatg gcaattccca agctcctttc
    29641 gccataggtg tttaaaacat attgatgaac ttcttctgtt ttaactcctt taaccacaaa
    29701 gtctgctgca cttcctatag tgtgttggct tttaggggct ccaccaacct ctgcattatg
    29761 ctctttgcag cgatatccac tatttataat aataggagca ttgtaatgtt ctctgatttc
    29821 acaaagaatg tctataagct catcacttgg tacattttga ggcaattcac atttgccgca
    29881 tttacattta aattcgcttt ctttaaaata agggttattt ttcattttca ctcctttaaa
    29941 tgtcgtaagt ttagttaaaa agctgaccca aaaactagaa aaattttgtg ctaaaactct
    30001 ttgaaaaaat aatttgcttg attaaaaaaa gaactcattt taaaattgcc gctaattttt
    30061 aaaggatgaa aaatgcttaa aagttttgaa aatgagcttt tagaactatt aaaagatttt
    30121 aaagtaagaa tgtatttagg cgagtttgaa gacacccaaa acatagcaag ttgtattaat
    30181 aatttagatg cttcgctttt gcttgatttt gaaggagaaa gttataaaga tttagaaaat
    30241 aaagtgggaa cttggaaact ttatatttta acccatacaa aatcaaaagc tcctaaacac
    30301 agaattgatg ctaagcataa attatttgat gcaatagaag ctgttgataa agtgctttta
    30361 aatgcagaac ctagcaatgg ttttagaata gagcttaaag atcttaaaaa ggtttacgaa
    30421 ggaataagcg atcatggcta tttaagcatt tatgcaagaa ctttgcaaag tagcttttta
    30481 ccaaaagatg attttttaag gatttaaaat gctttttatc aataaagaaa atttagtcga
    30541 agttagcaat gataagccca taaaagtggc aattaagggt gagtggaaag ggcataataa
    30601 tggcaggttt aaggttgatg ataaagattt aaactcgatg attgataatt ttaatcaaaa
    30661 aaagattgat ttggttattg actatgagca tcaaagctta aaaaatgaaa aagcacctgc
    30721 tgcaggttgg attaaagagc tttatttgga aaatgatgcc ttaatggcta aggctgagtt
    30781 taacgaagag gctaaaaaat atatagcaaa taagcaatac cgctatttat cccctgtgtt
    30841 tgaatttaat tcaaaagaca ataaaagtgg agaactagta agagctaagc ttcactcagt
    30901 cgcactaact aatacgccat ttattgatga gctaggcgaa ctcattgcta acaaaaataa
    30961 tattcatcaa aacaaaggag agaaaatgga tgaaaaaatc aaagagctag aatctcagat
    31021 tatagcttta aaaaatgaaa atagctcact cgttttacaa aatgaagctt taaaaaaaca
    31081 aaacgaagaa agcgttaaaa acttagcaag ctctttagtt gataatgctt taaatagcgg
    31141 aaaaattgct aattcccaaa aagaatgggc gctaatgtat gcttgtaagg atttagaagg
    31201 ctttaaaagc tttttagata ccaagaatga tcaagtgcaa gttccaaaaa ataatgtttt
    31261 tgcaaataaa aacacagcaa aaactaatga gtttgatgtt gtgaaaatga tgttagggga
    31321 ttaaaaatgg ctaaagctaa aaaagaaacc caaaacctag aaaatgaaga cttggaaact
    31381 ggagacttac ctaaagcttt gtctttagaa gatgagaacc tagctaatga agaagctgtg
    31441 agtgaaaatg aaaccgctaa ggaatttata aatgaagaag gagaagaaat gccatcaaag
    31501 gtcacaccaa aaagcttaag caatgatcct ttaattgcta tgccaaaaag ccttgaaagt
    31561 tttatcaata aagatttgtt ttcaattaat gcgaaaatag atcttgaaac taatgaaagt
    31621 ttagctcttg gaacgctttt aatcagcgaa gattttggag aaagctttaa aaaatgtcca
    31681 aatgaagata ttagtgcaaa agaaaatgtt aaattagcaa tgcttaaaga tcacgctctt
    31741 agttctggag tttatggggt tttattagca ggagaaatca atttaaaagg cgttcatgta
    31801 agtgcggtta aaaaggcttt tatgcaaaat ttaattatta atactaagga gtaaaaatgg
    31861 atttagagca acttttggaa cttttttcaa gtacaaaaat aactgaagtt attaatcaaa
    31921 ccaaagcttc acctcgcttt gtaagtgata ctttttttaa ggataaaatc ccaagtttag
    31981 agagcactgt aagggttgaa attataaaag gtgctggaat tgttttaaat agcatttcag
    32041 ataatgggga acattcttta gaaaatacta aagacgctta tattttaaat atacctttac
    32101 cacgctttgc attagcaaaa agaatcagtg caagcgagat taattcttta aggtctttag
    32161 cattgcaaga agctcagact aaaagcttaa gtggagctct tggggttttg gttaaagaaa
    32221 tgaaagaaag ctttaacact acgcttgaat atatggcaaa tggtgcttta tttggcaaga
    32281 ttttagatgg caaaggaaat gtgctttttg attttggaag tgcaagtaag aaagctgtta
    32341 gtgttaaaaa agatgggagt gtgactttag ccagcgtttg tgatgcgatt gattcagcaa
    32401 ttattgatga atttggaaca agtgctgatt atgaagtgct ttgtggaaat gaactttttg
    32461 cggctatttc taacttggca ttaagcgaag atctttataa aaatcatctt gcaagtaggg
    32521 atgagaaaga taagtcctta attttatatg gcaccaaata tcgccgttat agtgcaaaat
    32581 ataaaaatac aaatggaaaa agcgttgaat ttttaaaagg cactgagggt atggttgtgc
    32641 caaaggataa ttctaatcgc atttattata caagagcaaa tcatactgat gctttaggaa
    32701 aagcaccaag tttaatgttt gtttctaagc ctgagatttt acctcgtggg gctggaattg
    32761 aaattgtagg cgaaatgaga gccatgccag tttgcaccag accaaatgga cttattaagc
    32821 ttgttttaga gtaaaacgca caattttagc tttaaaggca aaaaatgctt ttaaagctaa
    32881 aaagatatta gaaaaagatt ttaaacgatt ttaaccatat tttaaccaca ttaaaaaaag
    32941 gtttttttaa atgaattatc aagacatttt agaagaaaag cttatcacag aaactaaaac
    33001 gcattttttt atgatagatg aaaaggattt aatcaaagaa ttaagcgttc atgccatagc
    33061 agagcttagc gatttaaatg ctgatggggt ttgtgataaa gaagtgattg atgatgctat
    33121 taatgatgca caaagttata ttgcaagttt tataaagata cctaaaaacc caactcctct
    33181 tttaaaagat atctgtgtaa agcttacaat tatggaatta aaacgccgaa atgattttcc
    33241 aaaagaaagc ttagaagaga ttagagagtg ggctaatgat ttacttttaa aaatggcaaa
    33301 taaaaaaatt ccaactgaaa tcaacgaaga taactttatt ccacaaaaca aagttagagc
    33361 gtttaaaatt aaaagaaaaa gaatggattt aaggagatta aatggctaaa aatttaactt
    33421 ccaccacaaa gcctaagatg gcaaaggtcg ggtgcggcct tcaggtgggt gcagagagtg
    33481 aaactcctgc tcgtaaggat aaatttactt catccgcgaa gtctcaaaac aacttaaaag
    33541 atttagcaaa agaactttat attgcaggtt ttgatatatt taaaattgca aaaattttaa
    33601 accgcaatga aaaaacgatt agaaactaca aagccaaaga tggcgattgg gataagcaaa
    33661 aagctaatct tttaacttca aaaataaaag ataaagaaag tgcctcatta tatgaaagtt
    33721 ttactgagca aatgttttgt gcgattgaaa atataaatac tgatgaaaaa atgaatgcag
    33781 aaaagaaaac tgaagccatt gcaaggatag gcgatagctt ttcaaaaatg agaaaggttg
    33841 caagattaga agatccaagt agctatcgtt taaatgttgc taaaaaagtg gttgaaatta
    33901 tcataagtca tttaaaaaat gataaagatt gcgtagcaaa acttgtatca cttttagaaa
    33961 gtggagtgat agaaaaagaa attttagcaa tggatattta atgctttttt ccaaagaaga
    34021 actcgatgag tttttaatct caaacgaaca aaagcacaaa aacactccaa atgaactaaa
    34081 aggtgctatg caaagaaaag actttttaga atggatggat gagctaaaaa atgaattaaa
    34141 aactcaattt ttgcatgaaa gccatttaga tcctacttta aaacaagaaa gaattaaaag
    34201 agcgagtgtg gattttgatt attttgcaag aacttatttt ccgcattatt ttaccattaa
    34261 aggagaatgt ggcttacatt tgcacttaaa tgaagttttt acaaaaatcg cacttaaaaa
    34321 agaaagcaaa ggtgaaaaac acgccatagc tgcaccaaga gctcatggta aatccaccta
    34381 cacttcacaa ctctttcctt tgtggtgctt agtttttaat tataaaagct ttatagtaga
    34441 gatttcagat gcggtcgaac ttatggaagg aatgcttgaa gctattaaag cagagcttga
    34501 agataatccg catttaaagc ttgattttcc cgaagtagta ggaattggca agacttggcg
    34561 cgtaggagag tttgtaagta ataatggcgt aaagattaaa gcctttggca gtggaaaaag
    34621 acttcgtggg gttagatatg gggttaaaag acctgattta gttattttag atgatttaga
    34681 aaatgatact aatgtcagga gtaaagatca aagggataaa ttagaagatt gggtggatga
    34741 agcggtttta aacttaggga gtgcagatgg aagtttagat gtgctttata ttggaaccat
    34801 tttacataat gatagtgttt tatctagaaa attaaagctt ggtttttgga atcctaaagt
    34861 cttccgttcc atcgaagagt ttccacaaag gcttgattta tgggatgaat acgccacgct
    34921 ttatagaaat gctgatttta ataccgctca tcaattttat ttaaaaaata aagctttaat
    34981 ggataaagga gctaaggttc tttgggaaga agctaaaagc ttagaggatt taatgaagtt
    35041 aagggctgaa aatctaaaag cttttaataa agagcaactc aataatccaa gaagtgaaaa
    35101 tcaaatcttt agccttgatg gcattaattt ttatgatgat ttacccgcca ttaatcagta
    35161 ttatatgtat attgacccag caggagaaaa agcaaaaagt gactttactg cgattaccat
    35221 tattggcaaa ggtacaaagg gtttttatgt agcagaaagc atcgtaaaaa tcttaaaagc
    35281 acaaagcatt ataaaaacca tttttaatct tcaaaagatt tataaatgtc gcttgattga
    35341 aattgaaact aatggcggtc aatttttctt aaaaaaatgg ttacaagaaa aaagcttaga
    35401 aagtggagtt tttttgcctt tgcgtggtaa aaataatagc gttagcaagt ttgaacgcat
    35461 tgagagttta agccttgctt ttgaaaatga agagcttttt ttacataaaa gccaaactat
    35521 gcttataaat caacttttag aatttccaga agggaaaaat gatgatgcac ctgatagctt
    35581 agcaggagca tttttattag caagaactaa aagtagcatt aaaagaagaa agcatcattt
    35641 taactctgtt tcaagaataa ggcgttttta aaggaagaat atgaaagaaa caaaaagtaa
    35701 aagagaagtg atattaaaaa ataatagtct tattaacact cttatcaatt caagctatat
    35761 aaatgtgctt aaaatcagcg aaaacgatca aagaatgatt tttaaagatc taagctttac
    35821 tcaagctcat caatcaagaa gaagtgtgat tttagccaaa gagcttcaaa tcgtttgtga
    35881 aaatgaaaaa attaaagaaa gctttgagta tctttttaat cccgatttaa taggtcaaat
    35941 cttagaaacc tatctttatg gacttaatgt ttttgaggtt aattacaagt taaaagatgg
    36001 tttttactat ccaatcttaa aacaaagaga ttttagaaat tttggcttta atgaaaacga
    36061 tgagctaatt tataatggca atggttttga tgaaattata gaagataaaa aagcaattta
    36121 tgggcttttt ggctctaatt tcttatttaa aaatggagac gccttactaa ccaaacttta
    36181 ttttccagta aagcttaaaa atgcaagttt aaagttttgg atggagtttt tagaaagatt
    36241 tggctctcct tgggcggttg caaaaacaga tagcgatcct gatgccttag cttctgaaat
    36301 ccatcaaatg ctaaatggcg atagtgcggt cattgataaa gaagaagagc ttgatttaat
    36361 ccagccaaag gctaaggcaa attataatga aataatagat tacttagata atcaaataag
    36421 aagcgtggtt ttaggagcta atttaagttc tcaagtaagc ggaggttctt tagcagcggc
    36481 tgagtcacat aatcaaataa gaaaagattt agccgcccaa gatggacaaa tcgttctttt
    36541 tattttaaat cgtgccatta agtttttcaa agaaatcaat cattttaaag atgaactcta
    36601 tgtgcagttt tttagcgaag cagaaccaaa aagtgagctt tgcgaaagag atttaaaact
    36661 ctttaatatg ggctttaact ttgatgaaga atacattaaa agcacttata atgtagaggg
    36721 aaagcttata aaagagcttt taaatcaaga aagcaaagtc ttaaaagatg ataaagaaaa
    36781 caaaaaagct ttatttgaaa acaaagcaaa gttagagagc tttgaagaag attttattga
    36841 caaagctttg gaacaaaaag aatacttaaa agtcgatgag agcatgtcaa agttttttca
    36901 agagcaattt gaaagcattg taaaagattg taaagatttt aacgaggcac tcaataaact
    36961 taaagaaaat ttttctagtt tagagcaaag cgagtttgaa aaacatcttt ttatagcttt
    37021 aaataattcg agtattttag gatacttgga ggattaaaat gacaggtgca aaaataggat
    37081 ttttttcaga acctactaaa gctgttgatt ttttaaaaaa taaaaagcca gagcttagtt
    37141 ttgattatga tgaactttca tattcaaccc ataaaaaagt ctttactatt gctaagctta
    37201 tggatgaaag cttgttaaaa gatatgcaag atactttagt aaatgctatt aaaaatgggg
    37261 ataaatttag cacttggagt aagattgcag aggagaaatt aaaagctaag ggttggtggg
    37321 gttcaaagga agtcataaac cctaaaacag gagaagttaa aaaaactcat tttaatagtg
    37381 caagattaaa aaaaatcttt gaggaaaact caagaaaagc taaagctaaa gctatctatg
    37441 aaaatcaaat gaaaagcact aaaccttatt ttaaatactg cacccaaaaa gattctttgg
    37501 ttagggacaa acacagagcc tttgatggca tagttttaca taaagatgat cctttttggg
    37561 acactcatta cccacatgta accatgcatg attatggttg taggtgtaaa gttataaatc
    37621 taggcgaaag tgaagttaaa gacttaaaaa ttccaccttc aaataccaaa gaaagcgaat
    37681 ttaatggctt taacgatgaa gagcttttag atgagcttta taaacaaaaa aacactgaag
    37741 tcattcaaaa ctttataaag cttgatatgt taagtgcagc ggctaaaaaa acaaaagaag
    37801 ttaaaagctt tgctcatcaa aaagaacttt acacttggca aaaaagctta gatgatatgg
    37861 tggatgaagt attaatcaaa gataatcaaa aatatcctat caatttcata caagtaggta
    37921 aaatggataa aagcaccaaa gagtttttag aaaaattaaa taaaaaagac ttagaagact
    37981 tatactttac actgagcaaa aacaatcttt tacacgcaag ccctaaaaga aaggcaagtt
    38041 ataatcaagc tttaagcgcg gatgaaatca agcaaattgt taaagtttta gatgaagcaa
    38101 aagaagttta ttgggataat gcaaataatt ctttattgta tttctttgaa gataaaaaag
    38161 atgctagtcg tatcaataaa attgtaatta cccctgatta taagctaaag aagtttggta
    38221 aaaccaatgc aatagttaca ttaggaaaag tagaagcgat taataaagat aataagacat
    38281 atattaagat cagataaggc ggtgagactt gcactcacaa tacatacccc aattaattgg
    38341 actatcctac tactacattt taggtatcaa ccttatctaa ttaagataat tttagcttga
    38401 tgaaactaaa aaggagttta aatggtttta gctttaggag aatttgagtt taaagcttta
    38461 aattttgata atttagaaag aagcttagaa tataacatac aaagtcaaaa taggcttaat
    38521 aatcataatg ctttatttgc aagttctaaa gaaagcgaaa agattaaaat acaaggcaaa
    38581 actttacctt taaaagggga tagaaatact tatttagata agcttgagaa tatggcaaaa
    38641 gaacaaagat cttttatctt aacaggagct aatggaaagt attatggtaa atttgtgatt
    38701 ttatccttaa atgaaaacag aagtgcattt gtagatggaa gtggctttgt agcacaaagc
    38761 tttagcatgg atttagaaag ggactttgat gagtaagatt tacatagcta aaaacaacga
    38821 gaggcttgat agtatagtct ataagcatta tgggacactt ttgtatttta atcaagtttt
    38881 attagccaat ccaagattag agcctctttt aaaaacaggg gataaagtga ttttacctag
    38941 tattaaaatc aaagaaagca aggaaaaggc tttatggtaa gaaaacctaa gtttaaactt
    39001 attgccaaag gtgaggatat cacagaaaaa ctttctaaaa atcttattag cattagttat
    39061 gaagataaag aaaaagctga aagtgatgag ataagtttaa gtgtttttgg gctttattcc
    39121 aagccacttt ttggggatag tttagagctt tggcttggct ttgaaaagct ttataaatgt
    39181 ggaagcttta gtgtgaatgt agtgagtaaa aactatactt caaatactac tgaagttaga
    39241 gcaagtgcta ttaattttag tggaaaaggc agcgttaata taaaagagaa aaagacaaga
    39301 agctttgaaa acactactct ttttaccata gcaagaaaaa tcgcaaatga aaacaatcta
    39361 aaaatcaaaa caagtggaga ggatcaaaat atagtaagta ttttacaaaa taatcaaagt
    39421 aatttagaat tcttatatag tatatgcttt gattatggtt ttatttgctg tgtaaaagaa
    39481 aatactttaa tcattactcc aaaagatggt aagattggcg ataatgctgc taatatcaca
    39541 agcaagaatg aaaatttacc cttatttgaa atagctttaa aagaatgtat ttcattagaa
    39601 atttcagaaa gtgctagaaa tgaatatagt gccgtaatag cagaatggca agatataaat
    39661 gaggcaaaga taaaaagcat aaaagtagga agtggggaga atatatataa aatgcaaatc
    39721 tcacaaccaa aaaatgataa tgaagctttt aaaaaagcac aagcaaaact caatgagctt
    39781 caaaaaggtg gattaaatgg aagatgtgag cttattgggc gtgaaataag agcaggtgga
    39841 aaacttaaga ttaaagatat taatatggat cattatgaat ttagtattaa aagcgtgagt
    39901 catagcttta atgactcagc ttatatagtt agtgtggagt ttgagagtta agactgatgc
    39961 tctaaaattt catcaatcgt ttcaaaaagt attttgtagg ctatcattat atcctgttgc
    40021 tcttctttct ctaatttggg gttaaaaaaa gtaatttttt tatcttttag atcttggcct
    40081 aaaagtaaaa attcttgttc tcgtattaaa taaaatgact tagtcagcat atctttcttt
    40141 tttacttcgt taattgagaa tctaataagt attttataat aatcaagtat cgctctataa
    40201 agatggcttt tagctttatc aatattttta aatggatctt caggattatc ttgataaaaa
    40261 aatgtagcta ggtgtgaaaa agcattatga acctccaaaa caggctgaac aaaaccattg
    40321 cttttgccat cttttgattg tttaagaata ctaaggatat cttctttagc tttatttatg
    40381 atggacttaa taagtttatt aattttacta caatcacaat atacattttt aaaatctttc
    40441 atatacggct tctcagaaga ttccctaaaa taaccagctg catttaaaat ttctccgatt
    40501 aaatctacaa tctgatcatc ttcgagtatt tttttaatac aagatggatt tatattatct
    40561 ttttttatct tagtaaggtt tcttcctttt ttaagaagtt tttcgataaa aatctctaat
    40621 ttatccaaat catgcttggt atcagaaagc aatgtactat taatttggtc aaaaaataaa
    40681 atactcccaa atatgtctct aaaacttacg atagcatcaa tatttctacc tctatcagaa
    40741 tcatttctga aaaaattaga taaatcaact tgaagataat ctaagtagca tttaaataat
    40801 ctgtttatta attctatttt atttttttct atatttgttt gtgataaact cataaacacc
    40861 cgaattttta taacttttat ctatagaatc actcaaatct tgcaaagctt ggtttagctc
    40921 tttatcttct attttgatac atatatcaga tacgctacca gtgttatgaa agggtatatt
    40981 aatataattt acctttccat aactatctct aactaacttt tccatttatt ttccttaaag
    41041 atataaaaaa acattgacaa attaaaatat ttctcaagcc taaatgctat catattttaa
    41101 caaatattgc aaatttaatt gaagtttatt atcaacataa tccaaactaa aacaaacttg
    41161 gttccaaatt ttctcttaat tctttagtga ttaaatacac agcatttaaa cttaaatcgt
    41221 attttttagc acattccgca cttgcatttt tagtgcttat tccctgtttt atgagtgttt
    41281 taaaatcctg ttttaattct tcatctctaa gtaaggtttt atagcttggt atgtaaatat
    41341 ttgcaccgcc aaattctttt aagatttctc gtttgtcgtt atttttcaca aaatcaataa
    41401 aatattcaaa gtattcgtta ttgctaagca atgctagtcc tatttgagtg tttttgcaaa
    41461 ttatagcaaa aaagctaaat tttatttagt agggtataat tttaaaaaat aaaaaggaga
    41521 ataaatgaaa aaaataataa gcgttttaat acttgcttta agcttattaa atgctaaaag
    41581 ttttgaagaa agcaaaaaag aattagtaaa attttataat gatctaggga gctcttactg
    41641 gtatgatttt tattgtcaag caccttttaa ggttaataaa aaaggaaaat atattagttt
    41701 tgaagtgatt aaaagtgatt tatatgctcc tagaaacgaa tacaccaaaa aaggaaaaat
    41761 taaccaaaga atcaaacgca tagaatggga gcatattatg cccgcccaaa actttggaaa
    41821 gcatttacct tgctggaaag aaggtggcag aaaagcttgt aaaaatgatc caacttttgc
    41881 aaaaatggaa gccgataaac aaaacctagt cccagccata ggagagataa atggggatag
    41941 aagcaatttt agatatgctg aggctcctac taatttaaaa tatactcaat atggaaattg
    42001 taaggtttat actgatttta aagcaaaaag attttatcct gcaaattatt ctaaaggctg
    42061 gattgcaaga agctatttat atatgagtaa gacctataat attaaattgt cagatcaaga
    42121 aagaaagctt atggaggctt gggataaaca ataccctatg gatgagaaag aaaaaagaat
    42181 tagagaatta ctctaattct ttgcaaactt tagccacaat ttcatctata tcaataacca
    42241 agcttttatc ttcttcctca aaactctcat caattctttc tctaattacg caaatcacat
    42301 taagtaaaat cccaaaatct ttatcagttt taatctgatg agtgattcca ttatgcatta
    42361 tttcaaggct tgttcttttt gcggcaaagg caatttgtga gtgtttttct atgcctaagg
    42421 ttaaaaaaaa ctctgcatcg taagaatgta tttctaaaat cattttaatc tccttttgtt
    42481 ttgatgagac aacattagct tcgtttggct taatgtgtgc tgttgttttc taaatttttt
    42541 agccctagga taactttatt agcatcttca acgcttaaat accaaagata caaaggtcgt
    42601 tttttaataa tattattaat aaactctctt aaagcccact gagtaggatt tttagcattt
    42661 ttactccaaa tggcttgtat catattaagt tgcttttttg tagcccttcc gcttttagtg
    42721 ttttcttttt taaaatacct tgcttttttg gtattttgct tttttaaaaa cttttcatca
    42781 tagcccaaag ttatagcaaa gtcccttagt tcatctatgc ttaaatcctt acttgaagct
    42841 ttgccatatc tttcatttaa aacccagcga tagctttcat catcgcttaa attagtatct
    42901 tttcttaagg tatgaatgat tttaattaag tgctttttta aagtgttttg agtattcatt
    42961 ttttagcctt taaaatttgc tctagttttg aagtgaattt atcaatattt gcattataaa
    43021 gcttatcttg attttttttg tattctaaat agttttgctc gtaatcttta tttattttag
    43081 tttggctagg aatttgagtt ttaataacag ggcttatttc aattttatta tcaaaaatga
    43141 ttttatcttg gtttttaaac atatattcaa ctagcttatt ataaaactct cctacattca
    43201 gtggttttct ttgctcatca caaagctctt tattagcatt aataaaataa agattatccc
    43261 cacaatcaac atgctttaaa acaggctttc ctaactcatc ataaacaatg ttaccatcat
    43321 aatatctaag tacaaaagaa tatgagaaat ctcctttttt tgtttgaaaa ataaaacgat
    43381 ttgaaaatga aatgaaaagc cattctaaaa aagactctat atttttgtac cttaagttta
    43441 aatcaagctc tgcaaaggcg cacacaagag aaagtttttc atagcttgta ccaacaaatt
    43501 gcttttttaa catggttaaa tcatagtatt ttttaaagcc tagtatatct tttggtgttt
    43561 tggctttaaa ataaagtttt tctataacca ctgcttgaac ttcactaata ccaaaaagct
    43621 cttttagtgc ctcttttgca ttatccatta aaactcctct tctagccaag aagctaaagc
    43681 tttttgctta tctttgtttt tatatttgtt tgccagtttt ggaagccaag ttgaattaag
    43741 tgctcttttc cagcatttta aaggcttttt attagccatg agccatcttc catcgtcttg
    43801 cttatagtaa tttataaaac tatctgctat aaaataaggg atagagcaag agtttttagc
    43861 attaaactca tcaatggctt taattaaatc ttctttgctt ggagggttaa atttcataac
    43921 tcacccccaa ataagcttaa ttctttgtcg ttgctgtctt tattgtcagc ttttaaactt
    43981 ttccaaacaa aagtgcgacc attctctccg ccaagctcac tttcccaaaa aacaccttta
    44041 aatttctcta aagtattcct tgaaaaatta tcactcctac tgacatcaag agccgataaa
    44101 atctcacttg tgcttaggct tttttcgttt aaaagcttta aaactttatc tataaaagct
    44161 tcttctttat cgctgatttt agcgttttgc aagtcggtgt ttttaatatt tagagttttt
    44221 gtattgataa aaaaggcttg atctttaatt cctgctcttt ctttttgcac actaagcaat
    44281 acttcaaagc cttgttctaa gttagccact ttttgtaaaa aatacatgca atcacttgag
    44341 tttctaatat gatttgagcc tttaaaagct ctgccatctt ttgtagaatg gtgtaaagcc
    44401 ataatggttg ccccacattc tcttaaattc atgagcaaag acattaaaga catcatttta
    44461 gtatcattat caatatctgc aaaattgcgt aaagaatcaa gtacaaataa aaccccttca
    44521 tagcttcctg ctacgccttt gccttcaatc atttctaaaa gttcataagc tgaagttttt
    44581 aagcttgatc tgtgaatata agtgaatttg ctttcattta aaataagttc accaaaacct
    44641 ctttcattta aaacatttaa aggattatcc atgtcaacat aaacgatgct tttaaccctt
    44701 gcatctttgc aaagtgtttt agaaatagca gcacttaaat aactttttcc actgccgcca
    44761 tttgcgtaaa taatggttat tgctttttta actaaaaaat cagggattaa aaactctaat
    44821 ttctcattta aatctttatt ttttagctta aactcattta aaaaatccaa attcatttta
    44881 ttttttcctt
//
LOCUS       DARATF010000003        31313 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.003, whole genome shotgun sequence.
ACCESSION   DARATF010000003 DARATF010000000
VERSION     DARATF010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31313
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.003"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(11..481)
                     /locus_tag="SB502_000132"
     CDS             complement(11..481)
                     /locus_tag="SB502_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HEG0433630.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNVNLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKISLKILKFIKKF"
     gene            complement(538..1962)
                     /locus_tag="SB502_000133"
     CDS             complement(538..1962)
                     /locus_tag="SB502_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEG0433631.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEITPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLT
                     KIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDK
                     SYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKII
                     TRALEHFEKISPDYAKGIKKALEK"
     gene            2134..2448
                     /locus_tag="SB502_000134"
     CDS             2134..2448
                     /locus_tag="SB502_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HEG0433632.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
     gene            2451..3146
                     /locus_tag="SB502_000135"
     CDS             2451..3146
                     /locus_tag="SB502_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433633.1"
                     /translation="MLFGFDDKREFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     SYAKNTKSLKMIFGNFLHDIMHVSFGKIQNINIKLNAYAFYFQKRKSLIFNTKISKNV
                     DFLRLLRIYLYGICFDVQILFSSYVYDKISFQNNEKNIDQDGDLIIIDKKFAILPLCK
                     EINTYNLKIENEIHELLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            3146..3637
                     /gene="fldA"
                     /locus_tag="SB502_000136"
     CDS             3146..3637
                     /gene="fldA"
                     /locus_tag="SB502_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HEG0433634.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKP
                     YFA"
     gene            complement(3683..4213)
                     /locus_tag="SB502_000137"
     CDS             complement(3683..4213)
                     /locus_tag="SB502_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433635.1"
                     /translation="MSKITLILSFFITLFMSACTNTTFTQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLQTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLKNKIINQIVSFFYF"
     gene            complement(4219..4929)
                     /locus_tag="SB502_000138"
     CDS             complement(4219..4929)
                     /locus_tag="SB502_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEG0433636.1"
                     /translation="MKKLSLILACSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDNELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDAELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            complement(4978..6783)
                     /gene="selB"
                     /locus_tag="SB502_000139"
     CDS             complement(4978..6783)
                     /gene="selB"
                     /locus_tag="SB502_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEG0433637.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSVCLFIVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEILEELKNLDYPILKVFHTSIKNNQGIEELKNY
                     LYTIENKENYEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIV
                     KNIQNHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDALVKAKNLQ
                     NSKMIFCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGG
                     KVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKDAHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNVYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASE
                     NFCELGLKEMSNLLDFQNGIYFKKGIDFEKLQEKNNNQLYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEYLDKFPQVSKEAEKRFLTNI"
     gene            complement(6780..8102)
                     /locus_tag="SB502_000140"
     CDS             complement(6780..8102)
                     /locus_tag="SB502_000140"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEG0433638.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFSQ
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYDKEVIS
                     SRGELIEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAISENTALILKTHKSNF
                     ALMGFHSEANIKDLHELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEEKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILTINQMENL"
     gene            8180..9841
                     /locus_tag="SB502_000141"
     CDS             8180..9841
                     /locus_tag="SB502_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0433639.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEALICNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYEARASVYDLGLDLEQSKEVQNRLILADSDTQTV
                     EFLKEHGFKVIALSSAEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAENLSVVRK
                     DFTRQSGCYNLLNFENLEALLEFLQSKSPKYPYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDEKKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLTLLQNSGANLVFYTDFVS
                     RGSNEAIMLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFSCIECGKE
                     FATKKAVEKIANLMKPKFGNDEDKIKTLYCCADCKAKVMIKAMIN"
     gene            complement(9834..10643)
                     /locus_tag="SB502_000142"
     CDS             complement(9834..10643)
                     /locus_tag="SB502_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEG0433640.1"
                     /translation="MKKILFLFCSFFLAFAKPSLEIPKLSKQAKQNFILENVKFNYNG
                     TIYKIFIAKNKNENSNYKYKIIYLLDGNAFFPLFLNLFNTPVKENLLIIGIGYDNNLA
                     FDTQKRTKDYTPTTNLNKQGGGSKEFRNFLITQLIPYINKMYPIDFSHQILFGHSFGG
                     LFAIDTLLYDSKIFSHYFIISPSLWWDNSEFLPNIIKLQTCPKIYIGLGSLETNSSII
                     KGVAKLNAQKLSEKISKETNCKTHFKLFKNETHGSVISKAMLWMKKLLDLN"
     gene            complement(10640..11935)
                     /locus_tag="SB502_000143"
     CDS             complement(10640..11935)
                     /locus_tag="SB502_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0433641.1"
                     /translation="MLNYVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFF
                     ILSYLFFAFSNSIDFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDTLNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     NFSTFGENLGVVDIYKNSKNLVVKFDSKLTSKEELEGKL"
     gene            12102..12704
                     /gene="rdgB"
                     /locus_tag="SB502_000144"
     CDS             12102..12704
                     /gene="rdgB"
                     /locus_tag="SB502_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEG0433642.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNR
                     DKLVNEMIKKGFKQSKAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            complement(12735..15206)
                     /locus_tag="SB502_000145"
     CDS             complement(12735..15206)
                     /locus_tag="SB502_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HEG0433643.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIESQDINRTKARNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNDLVEKRDLATDEKEKDQIRLAIKKHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMITYIKSDLVLYGVSLVFLLGFALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYIALVLIITLSVVVHLITHFIENTQNHPK
                     ATVERIVLETLLAKANPSLYAIVTTMIGFFSLMLSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYGISVLAIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNTSNTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSILSLNSLLTLGKNINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSIRIVDSDPNLRRNEFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     ILVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQHKEHILKQ"
     gene            complement(15206..15775)
                     /locus_tag="SB502_000146"
     CDS             complement(15206..15775)
                     /locus_tag="SB502_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEG0433644.1"
                     /translation="MKKIFLILALFFNAFALQLDEISSTMQKNIDASLKLLQDSKEDK
                     KQAADGIFKLFDSIIDYKLMAKLSLSKNYSKLNPKEQEKFTTAFEASLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLVYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            complement(15785..16483)
                     /locus_tag="SB502_000147"
     CDS             complement(15785..16483)
                     /locus_tag="SB502_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEG0433645.1"
                     /translation="MRIKFISFILIFFAIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNTITPEFIRLGVRNFFDNLLVPLRFVGNILQFKFEE
                     AGEEFKRFTTNTIMGFGGLMDMASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLALPATWYASFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            complement(16528..16971)
                     /locus_tag="SB502_000148"
     CDS             complement(16528..16971)
                     /locus_tag="SB502_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEG0433646.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKEDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFALNSIHYDNTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKITTIFYKKTALLEPDFKVKEATEWVDFYWDINLD"
     gene            complement(16985..18304)
                     /locus_tag="SB502_000149"
     CDS             complement(16985..18304)
                     /locus_tag="SB502_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEG0433647.1"
                     /translation="MSFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMS
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAV
                     FISSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFILGVLASSIIAWIFHLDNASFPVQIF
                     SWPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAAASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            complement(18314..19378)
                     /gene="mqnE"
                     /locus_tag="SB502_000150"
     CDS             complement(18314..19378)
                     /gene="mqnE"
                     /locus_tag="SB502_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEG0433648.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKSKQSNATMLFGHIEER
                     HHRIDHMLRLRDLQDQTGGFNAFIPLVWQRDNSFIQTDKIMDSEEILKTIAISRLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            19522..21870
                     /locus_tag="SB502_000151"
     CDS             19522..21870
                     /locus_tag="SB502_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEG0433649.1"
                     /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKK
                     AYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNESISLIFVYKDIKAFHLKPM
                     IKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSIIQTRFICGSRILFKGIKTKFES
                     ILKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLESLLVLFKTSPKNY
                     ALNFIDEKNLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLINVHDLSELMYKKAKKHF
                     GANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLKQEYKFKTLVEVLEYLLKLEDK
                     HVIFDLNLVFALRRLKYGKKDIEKALILFEKIFYKRHSFCVLKLLLDSGILKDLCKPF
                     WTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQKLKTDEKMILKLVILLSAIES
                     ENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSK
                     LENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESARRVKKE
                     LTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDIVMISKLAKENDFKFWFNNETN
                     LSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDNKIYLRFEYDNIISDEQKLKLCE
                     LLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNVFNEL
                     ELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVNLLISE"
     gene            21875..23671
                     /gene="glmS"
                     /locus_tag="SB502_000152"
     CDS             21875..23671
                     /gene="glmS"
                     /locus_tag="SB502_000152"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEG0433650.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFELYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDILKSLCFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGNEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            23674..26799
                     /locus_tag="SB502_000153"
     CDS             23674..26799
                     /locus_tag="SB502_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEG0433651.1"
                     /translation="MKKFFCLTLVCKLFALSEFELHHIDKVHKLGYSGDTIIIGVADD
                     AFNQDHISLKDKILKSTYPTDTAGKQLIPDLKKSTHGSHVAGIAVGAKIGDSKPYGVA
                     YGAKFYGAGVFPNGSYTQIPDIYNFFKDVSIINNSWGINFYPYFNLKASNSGLVDCTQ
                     TNQGTSYNICNTPLEYVMKADKVANDMMRLSKDKGVLNVFAAGNEGILSPALHAILPS
                     YDESLRAWLAVGALDANEITLESDGTLIIKSQGLADFSNGFKGATNFSLVAAGVNINN
                     VDSSTNDKFTKKSGTSMAAPMVSGTAALVKQNFPFLDGKQIADILLSTANKNYKAPKF
                     TVKQVTDGTNQPKFLIVYISQDPPRIEDEIKRDLKQLYNGMQVQVNGQWIDYSDYIWD
                     NRDSAQSQKLNTSTISSINGVVRVEKEELFGQGILDAQKALKGLSILDANRLSDQDVL
                     KYEQEPNTAYYTINTAGYDAEFSNDISQRKWDESTHLSSAINKPTHLANLNIGLSKEG
                     EGILIISGQNTYEGATLIKQGELKLKGKVKNNAYVEQKAILSGNGIVGQNLNNKGIVR
                     PGNEDLNDLTVQGTYTQEGVDSKLQLDFGNYKNSKLIAKTYDIKSGNLEYIPLPKYYI
                     LNKPVKINLGDLEKSLSSFNHVLIQNTYALNFDFVLSDDLVSINKTLIKPNLKPNAYE
                     IPNTSLGNALRQLRSRADLSQTYQEFFASLDNGIDVKTKLNRIEGSGYLSTFSNHNQS
                     NLMQNNMLFTLHPLNINNFAQNNNILLASTYLPRIFSNEEYFWHLTPSYKYYKDKDFS
                     GQKTGANISLGENFSSGFLAYALSLSSAKFNFNNGSDLKSYNMDLLLNYNHDLDFIKI
                     LSGLGIGVGFNTLNRFVVEQPIEGKYKTLQTSAQLGVTKDIILGQDFIFNPLMYFTHS
                     FFYQEDFKENKSPFAKNYESLKHHSINANLGFNLAKNIEQDDYQASFSTFVIFEKRIY
                     GRTLENKASFVDFPIAFIQKYKLKDNILSQGFNSEFLYKNNVFWQFMLMNRFSHNAYE
                     LHLMSSVGKRF"
     gene            26855..28246
                     /gene="fumC"
                     /locus_tag="SB502_000154"
     CDS             26855..28246
                     /gene="fumC"
                     /locus_tag="SB502_000154"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEG0433652.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFISSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRVKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVSEEDFN
                     KFVDPTKMIGSKA"
     gene            complement(28276..29319)
                     /locus_tag="SB502_000155"
     CDS             complement(28276..29319)
                     /locus_tag="SB502_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEG0433653.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITM
                     FYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(29323..30330)
                     /gene="ruvB"
                     /locus_tag="SB502_000156"
     CDS             complement(29323..30330)
                     /gene="ruvB"
                     /locus_tag="SB502_000156"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEG0433654.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASTKSYSALKLNYEKTLFE
                     E"
     gene            30421..30831
                     /locus_tag="SB502_000157"
     CDS             30421..30831
                     /locus_tag="SB502_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HEG0433655.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            30832..31190
                     /gene="ssrA"
                     /locus_tag="SB502_000158"
     tmRNA           30832..31190
                     /gene="ssrA"
                     /locus_tag="SB502_000158"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT        10871 a         4402 c         4995 g        11045 t
ORIGIN      
        1 taaaaaataa ctaaaatttt ttgataaatt ttagtatttt taggcttatt ttctttaaaa
       61 aattattttt agattttttg agtaaaaatt ctgccacatc tttgcgtcca aacataatag
      121 caaaagtata aggtgtcatt cctaaaccat tgttttcatc aatatttgct ccatatttaa
      181 ctaaaagttc acacataggt aagtatcctt taaaacaaac tcccgctaat ggggtttgtc
      241 cacgatcgtt tttttcatct acttttgcac ctttttctaa aagcatttta gcgctttcat
      301 aagaattatt ataagctgca agcataagca agctatcgcc tttatgagtt tttaaattta
      361 catttaaacc tgcttctatc atgattttaa gattttcaca ttcattattt cttgcaaaat
      421 taaaagccat tttgcaaagc tcttcaaatc ttttttcttc ttctaaacta agagttgtca
      481 ttgtttttcc ttaattatta taatctttag tttgccacca aaagtggcaa gtaaaaatta
      541 tttttctaaa gcttttttaa ttccttttgc ataatcaggt gaaatttttt caaaatgttc
      601 taaagctcta gtgataattt tttcatcaac tccctccata gaagcggcga tattatgaaa
      661 aagttgagtt ttttgatcat cattcataag attaaataaa gctcttggtt gagtataaaa
      721 gtcattatct agtggagcat atctttgtgc tacgccttct aagactaaat caggttcaag
      781 atagcttttg tcttcttttg ggctattatc atagctgttt ggttcataat aagctgcatc
      841 atttttataa ctatcaaaat tcatagcacc agcgacattg taagtattca cttcgctttt
      901 tgcacgattt acgggcaaaa gatgataatt agttcctatt ctatatcttt gtgcatcagg
      961 atatgaaaaa attctagctt gcaacatttt atcagggcta aagccaattc caggaacgat
     1021 attgcttgga ctaaaggcag cttgttcaac ttcattaaaa taattttgag gatttttgtt
     1081 tagaatcatt tcgcctatat ccatcaaagg cacaagacta tgaggccaaa tttttgttaa
     1141 atcaaaagga ttaaatccaa gtttttctat atctttttca gcaagaattt gaacttgaac
     1201 tttccatttt ggaaaatctt tattttctat agcattatag agatctcttt gatgactttc
     1261 tctatctttt gctataagct cggcagcttc ttggttggta agatttttaa tcccttgttg
     1321 ggttttaaaa tggaatttca cccaaaatct ttcattttta tcattaataa aactataagt
     1381 atggcttcca aatccatgca tatgacgata acttgcagga attcctctat cgctcataag
     1441 aatggttact tgatgtaaac tttcaggaca taaactccaa aaatcccaag cagcattatt
     1501 acttcttaga tgagttcttg gatctctttt ttgagtatga atgaaatcag gaaatttata
     1561 cgcatcacgg ataaaaaaag ttggagtatt atttcctact aaatcccagt ttccttcttt
     1621 ggtgtaaaat ttaatggcaa atccacgtac atcacgctca gcatctgctg cacctgcttc
     1681 acctgcaaca gtagaaaagc gtaggaaaag aggagttatt tctccttttt gaaatatttt
     1741 tgccttagta taagcagata aatcagcggt gatttttatt tctccataag ccccacttcc
     1801 cttggcatga acggttcttt ctggaattct ttctctattt tgatgagcaa gtttttcaag
     1861 caaaagataa tcttgcataa gcaaaggtcc ttttgcgcct gcacttaatg aattttggtt
     1921 atcggctata atgtttccaa aatcgttagt caattttttc attgttttct cctaaaataa
     1981 taaattttat caattagtaa attatatcta ttaaaaatta aaattaactg aataattgca
     2041 ttttattgat aataaatttc aaaataaatt tagttttttt atattataat aataattatc
     2101 aaaatatatt ttaaaaatca caaaggagaa tttatgtcag ttttggttat tggtgcagat
     2161 gaaatcactc ctattagagc tgttttacat gatttaggtg ctaaaaaaat agaacactgg
     2221 gatgcgcgta atgaaaatag agttaatcgc aagccgattc cttgtgatac agaatgtata
     2281 gtaatgttaa caagcttttt aaatcataat actatgaaaa aaatcaaaaa tgaagctaaa
     2341 aagcgtaaaa ttccattagt ttgtgcaaaa agaagtgtaa gttgtgtgta ttgtgaatat
     2401 tgtaaaattt ttaatcttaa taaagaattt tcttgctata aaggttaaag atgttatttg
     2461 gatttgatga taagcgagaa tttataccgc aaatttatcg ctatttaaac aatcaagagc
     2521 ttatgttgac ttttttaact caatataatg cgagcgttga tagcgctcta aaaattcctc
     2581 tttcatatgc aaaaaatacc aagagtttaa aaatgatatt tggaaatttt ttacatgata
     2641 taatgcatgt ttcatttggt aagattcaaa atataaatat caagcttaat gcatacgctt
     2701 tttactttca aaaaagaaaa agcttgattt ttaatactaa aatatctaag aatgtcgatt
     2761 ttttaagact tttaagaatt tatctttatg gcatttgttt tgatgtgcaa attttattta
     2821 gctcttatgt ttatgataag atttcttttc aaaataatga aaaaaatata gatcaagatg
     2881 gtgatcttat tataatagat aagaaatttg caattttacc actttgcaaa gagattaata
     2941 catataattt aaaaattgaa aatgaaattc atgaattatt gaatttaata aaagaaaaca
     3001 attttgaaaa attttatatt gtttgtccgc gtaacaaaaa tttcacacat tttattgaaa
     3061 taaaacattt tttgtgtgat ttaaacaaaa ctatgttaaa attagttccg tataaaatat
     3121 caaatcaaat tataaggaga aaataatgtc agtagcagta atctatggta gtgctatggg
     3181 aaatacagaa ggagcggcta atacaattgc ttcaaaactt ggaattagcg atgtttttaa
     3241 tatctcagat attgatgcgg ctaaaatgaa ttcttacgat aaattaattt gtggaacttc
     3301 aacttgggga agtggtgatt tacaagatga ttgggatggt tttgattttt cagggcttag
     3361 tctcggtgga aaaaccgtag ctgtatttgg tatgggtgat agtgaaagtt attctgatac
     3421 tttttgtggt ggcatgggta aattagctca aaatttaaaa gatgcaggcg caaatttggt
     3481 aggagaagtt tcaactgatg gttatacatt tgaagcaagt gatgcggttg tagatggtaa
     3541 atttgttgga cttgctcttg acaatgataa tcaagaagat caaactgaat caagaattga
     3601 tgcttggata gaacaaatca aaccttattt tgcttaataa ttcttaaaat caagagtttt
     3661 tatactcttg attgtctttt tcttaaaaat aaaaaaaact cactatttga tttataattt
     3721 tattttttaa agataattga cagcgttctt tatttccaag ataagctgtt cttgcaagaa
     3781 gacttgtttt ttgagaattg tgatttttag agttgatttg taaattaact tgcatagtat
     3841 agtagttttc taccatccat tctccatcgc tttccaaagg atcaaaatca taaaaaaatc
     3901 ttgctgaagt tgtgattttt tgagcataag aatgcttttt catatctaca agattgatta
     3961 aaatttcata atctgcattc tcttttactt cttttaagcc taaattttta agttttaaag
     4021 ccaaatctct atctagagta gtttgaagtt gactaggatt ttgaaaggaa attttaaaac
     4081 tttgttgttt ttgtgatctg ataaaaatgc cttcattgct tgtttgaata aagctttgtg
     4141 tgaaagttgt attggtgcaa gcactcataa agagtgttat aaaaaagctt aaaattaaag
     4201 taattttaga cattaggttt atttaataat agttggagta gcgctaagac ctaatgagcg
     4261 atatttttca tataaggaaa aaacttcttt taattctgca tcgcttactt ttggataatt
     4321 tttgatattt gcatcatagt atttgtttaa aattgcgatt ttttctttat cattttttgc
     4381 tttttttgct tctttgtaga ttagagcgga tttttcaaaa gcagattttc catgtactgg
     4441 agttaaaata taattaactt gatagttttt aagttcatta tcaatttgag ctaaatgttc
     4501 tctacaataa gggcattcag gatctgaaaa aacataaatt gcgggtttat ttttatctcc
     4561 taaagctatt accatggttt ctttttgtgc tacagcttta gcattttttg taaaattttc
     4621 tcttgcttct tgaaattttt tcatttcata ttcttgagca taagaaattc ccgttttcaa
     4681 gtcgataaga tcaggggtaa taagactatc ttttgtaaaa agaatgtttt cttgtttttg
     4741 tccatttaat tcaacgctta caataacact ttcaaaaccc gtattaccaa ccttttgacg
     4801 atttgataca ctaacggtag catttggaaa ttgtgcttta atgctttttg aataaaaatc
     4861 actaatttct gaattacttg cagcaaacaa agatgctgaa caggcaagaa ttaaacttaa
     4921 ttttttcata gtttataaat cctttaaata aattatgttt aattctataa tgattttcta
     4981 aatgtttgtt aaaaatcttt tttcagcttc tttgcttact tgaggaaatt tgtctaagta
     5041 ttctaaataa gcaatagcat attttcttga aagattgaaa tattctttca tactttgcac
     5101 atcaagactt tgatttttta ataaatttaa acattcttgc ataagttttt caagagcttg
     5161 tttttctata aaaagattgt gtgaaagtct tacaactaag cctttttggg taagtttttt
     5221 gagtatatta tctccgcttt ttctatcaag ttctaaaaaa tcataaagat tataaggagc
     5281 ttcgggttta ataccttgtt tttttaaaat ttcatataat tgattattat ttttttcttg
     5341 aagtttttca aaatctatgc cttttttaaa ataaattcca ttttgaaaat ccaataaatt
     5401 tgacatctct ttaagcccga gttcgcaaaa attttcactt gcccaagtaa tccttaaagc
     5461 taaagaatgt gctgaaagca tggcataagg atttttttca agtatgaatt tgatgaaatt
     5521 tttaatttct tctagacttt gtaaatgata tacattaaga tttttttcat caacaaatac
     5581 ttgatttaat tcttttgcta atttcaatgc tttttgatga gaaagtttaa atctctgata
     5641 acttgaaagc aagccaaagc cgtatttgtg tgcgtctttt aagaaagaaa aagccgcttt
     5701 aaaatcttta tttttcaaaa acattaaaaa tttatttttt tgttcttttt ttaaaggttc
     5761 gcttaaagga tttaaaacct taccaccgcc tataacacga ttgttttgta ataaaataaa
     5821 agcctcatca aaacttaaaa atacattttt atcaaaacta aaatgcacaa aaaattcatc
     5881 attttctagt ttttttaata tatttatttt acattctatt tgtcttgaac ccacacaaaa
     5941 aatcattttg ctattttgta aattttttgc tttaactaaa gcatcgcatt ctttaaaggc
     6001 tttaaaataa ccttttttac ttagtaaata accttttttc aactctttat aatcacaatt
     6061 taaacttaaa gccacacggt tgcaagcttt gatttgctct agattggtat cgtgattttg
     6121 tatattttta acaatgagtt ctttttgagt gtctaaacag atgatttttt catttaaagt
     6181 gatacttcct tcattcaagc tgcctgtaac gacagttcct atacctttta gagaaaaaac
     6241 tctatcgata taataatgaa aaatcagttc ttcataattt tctttgtttt ctatggtata
     6301 aagataattt tttaattctt ctatgccttg attatttttt atactggtat gaaatacttt
     6361 taaaatggga taatctaaat tttttaactc ttctaaaatt tctacacttt tttgctctat
     6421 gttttcacaa agatcgcatt tgctaagtac taaaatgata tttttaatat caagaatttt
     6481 taaaatttct aaatgttcta aactttgttc ttttaaaccc tcgttaatat ctacgataaa
     6541 taaacaaaca ctaaagccaa aagctccact taccatagtt ttaaccaaat ctttatgtcc
     6601 tggaacatcg ataaaagaaa tgtttttatc ttttaattta agatttgaaa aacttaaatt
     6661 aatggtgatt tgtctttctt gttcttcttt taaactatcg ccttcaaaac catttaaagc
     6721 tttaatgagt gaagtttttc catgatcaat atgtcctgcg gttcctataa taacagattt
     6781 cataagtttt ccatttgatt aattgtaaga ataagttttt gaagttcatt ttctcgtata
     6841 gttctaaaat caagaacaaa ttcatcattt tcaatgcgtc ctatgatatt ttcttttcta
     6901 aatcgagttt gtagttttaa agcatctcct tgaaaagtta gtatataagt atctaaactt
     6961 ttatcaggca tagaacctcc tcctactaaa cttttgcttt ttttgagttg ggtttgaaat
     7021 tttaattctt tttgcactct taaagctttt tcttctataa aggataagtc atcatttaaa
     7081 agttttaagg taataatttt ttcataatct ttttgtaaat aagcttttaa gctttcattt
     7141 aaaaaagata gggttaattt atccactctt agcattctta aaagttgatt ttgtttaagt
     7201 ttttctatga gttctttttt tccaagtata atgcctgctt gcacactacc aaaaagttta
     7261 tctccactaa aacttaaaat atcacattct tgtacgagtt ttttgatttt aggttcattt
     7321 ttaatcagct tttcatttaa attttcacac cagccagaac ctagatcata ataactcaaa
     7381 agcccttttt cttttgctag ttcatgtaga tcttttatat ttgcttcact atgaaaaccc
     7441 ataagagcga aattagactt gtgggttttt aaaattagag cggtattttc actgatagct
     7501 tgttcatagt cttttaagtg tgttttgttg ctagttccaa cttcgcaaag ctttacacct
     7561 gcagctttta tcacttcagg cacacgaaaa cttccgccaa tttctataag ttctcctctt
     7621 gagcttatga cttccttatc ataacaaaga gaattaagca ctaaaaaaac tgccgcagcg
     7681 ttgttattga ctactaaagc atcttcgcat tcaaaaagca ttttaagttt ttccaacacc
     7741 aaagcatagc gagagcctct ttttccattt tctaaatcaa actctacatt agaataatta
     7801 caaatgatat ctttacacgc ttcataaagt tcttcatgga ttacacttct gccaaggttt
     7861 gtgtgtataa ccactccact tgcattgatc acactttgta aatctttgcg gtaaaaagtt
     7921 ttgatttctt ttttgatttc taaaagtagt ttatctttag aaatttcatc ttgggaaaaa
     7981 ttttctttta gttttgcgac aactttttta caaaaaaatg ctttgatata aaaaggatag
     8041 gattttaaac tctcatcttc aataagagtg ttaatctgtg gaaaagttct aaatttgttc
     8101 atcttaagcc ttaagaaaat atttggttat tttaacatag aatttataaa atgatgtttt
     8161 aaagagatta aggaagacaa tgcaagattt tgtttatata aaaaatgatg ttttaatccc
     8221 tttgcctgat gctattgaaa ttttagatca ggcaaatgat aaagaagcat taatttgcaa
     8281 tgataaaaat caaaaagcac aaatttatgc cccagagatt aacttttatc ttaaaaattc
     8341 tcaagatgaa attttagagc aaagtaaaaa tgttttaacg ctttatgaag caagggctag
     8401 cgtttatgat ttagggcttg atttagaaca aagcaaagaa gtgcaaaatc gtttgatttt
     8461 ggcagatagt gatactcaaa ctgtagagtt tttaaaagaa catggattta aggttattgc
     8521 tttaagtagt gcagaaattt tagctgtttt tggaagtgtg ggggagcttt gtgctgtggt
     8581 taaaaatcaa ggcgaagaag tggaaataga ttttgatttt ttacttttta aagctgaaaa
     8641 tttaagcgtt gtgcgtaaag attttacaag acaaagtgga tgttataatc ttttaaattt
     8701 tgaaaatctt gaagcattgt tagagttttt gcaaagcaaa agtccaaaat atccttataa
     8761 aacttatatt agctataatg ctagcgtgtg tcaataccat gaaagacgca gtgagcattg
     8821 tgcaaaatgt gctgaaattt gtcctactgt ggcgatttta aaagatgatg aaaaaaagca
     8881 tttagaattt tctcaagtgg attgtttggg ttgtggagga tgtattagtg tgtgtcctag
     8941 cggatcgctt gattatgctc ctatgccaag agaaagtttt tttacccttt gtgagtttta
     9001 taaagataaa aaaattttaa tcattcctaa aaaaatgtct ttagaaaatt taaatcttgc
     9061 tttaccaaaa gatgttttac cctttatgat agagggtgaa aaatggcttt cttctatgca
     9121 ttttttaaca cttttgcaaa atagtggtgc aaatttggtt ttttatacgg actttgtatc
     9181 tcgtggtagc aatgaagcca ttatgctttt aaatactttt tttgagagaa aatttcaaaa
     9241 aaaagctatt tttgttgcta aagatgaaaa agaattgcaa aatgttttaa aagagcaaga
     9301 attcatacaa gatttaaaat atgattttca taataacacc ttaactacaa gagaaaattt
     9361 tgccaaaaga atgcaagaaa tgataaaaaa tgaagatttt ggtagtatag aaagtggcga
     9421 atggttgcgt tatggtaagg tagaaatcaa tcctaatacc tgtacgcttt gtctttcttg
     9481 tgtgggtgcc tgtaatgtag gagctttaat cgctgataaa caagaaaatg ctttgaaatt
     9541 caatgcttct ctttgtacga cttgtgggta ttgtgagtta agttgtgctg aaaaagatac
     9601 tttaaaatta tttcgtagtg gaatggagtt tagagcttct tattttgaat atcaaaccat
     9661 ggcaaaagat gagctttttt cctgtataga atgcggtaaa gaatttgcga ccaaaaaagc
     9721 tgtagaaaaa atagccaatt taatgaagcc taaatttggt aatgatgagg ataaaatcaa
     9781 aacactttat tgctgtgcag attgcaaggc aaaagtgatg ataaaagcaa tgattaatta
     9841 agatcaagaa gctttttcat ccacagcata gctttagata tgacacttcc atgagtttca
     9901 tttttaaaaa gtttaaaatg agttttacaa ttagtttctt tggatatttt ttcgctaagt
     9961 ttttgagcat tgagcttagc tacacctttg ataatacttg aatttgtttc caatgaacct
    10021 aatccgatgt aaattttagg gcaagtttgt aattttatga tattaggtaa aaactcacta
    10081 ttatcccacc ataaagaagg tgaaataata aaataatgac taaaaatctt actatcataa
    10141 agaagtgtat caatggcaaa aagtcctcca aaagaatgtc caaagagaat ttgatggcta
    10201 aaatcaatag gatacatttt gttgatataa gggatgagtt gggttattaa gaaatttcta
    10261 aattctttac tacctccacc ttgtttattt aaatttgttg taggcgtata atctttagtg
    10321 cgtttttgtg tatcaaaagc taaattatta tcataaccta ttccaataat taaaagattt
    10381 tctttgacag gagtgttgaa aagatttaaa aaaagaggaa aaaaggcatt tccatcgagt
    10441 aaataaatga ttttatattt ataatttgag ttttcattct tgtttttagc tataaaaatt
    10501 ttatatattg tgccattata attaaatttg acattttcta aaataaagtt ttgttttgct
    10561 tgttttgaga gcttgggtat ctctagactt ggttttgcaa aagctagaaa aaaagaacag
    10621 aataaaaata atattttttt cataatttgc cttctaattc ttctttactt gtaagtttgc
    10681 tatcaaattt aacaacaaga tttttagagt ttttataaat atctacaacc cctaaatttt
    10741 caccaaaagt actgaaattt aaaggcgttt ctaaaggtag ataaaggttt ttaaaatcag
    10801 ctggattttt taagaaaaat aatgccacaa gccaaattag agctaaaatt actaaaataa
    10861 tagctaaaag atttaaggta tctagatgta aaaatatccc tccgataata ccacctataa
    10921 aacttccacc atatccaaaa gcattaaata accctaatgc tgcacctttt tcatgaactt
    10981 tacaaaattt tgatgcacaa ctttgcataa taggttcgtg taaattaaaa cctataaaaa
    11041 aaatcacaac tgctatgata aaaaaatcaa tagaattact aaaagcaaaa aaaagataag
    11101 aaagtatgaa aaaaacaatt cctaagagta aaatttgttt agctaaacct cttttttcgc
    11161 ctaaacttcc agcaaagccc atagcgataa aacctgctac catagaagcg ctataaacaa
    11221 tccaaagttt atcagaagca aagcctaaat gttttactag aataatagga atacttaaaa
    11281 atgctatact cataagcatt ttttgcatga aattagtaag attcataagg gctaaatttt
    11341 tttgtttaat aagatgaaaa aaaggagttt tttcattttc atgagtgatt ttattttctt
    11401 taggtacaac ggtataaagt aaaattatac ataaaagaga caaagccgca ctaagatcaa
    11461 aaaggctaga taaaccccat tttgcactca ttagaggaga aatgaccata gaggctgcaa
    11521 aactaagtcc tataaaagaa cccattaccg ccatggcttt accacgattt tcttctgtga
    11581 taaaatcact tatcattgcc gtagctactg ctccaatagc tcctgcacct tggagcattc
    11641 tccctaaaag catggtgtaa atattttccg caaaagagca gattaaagag cctattataa
    11701 aaataatcag tccaatgagc atggtttttt tacgaccaat tttatcactt aaaatcccaa
    11761 aaggcatttg taaaatcatt tgggttaagg cgtaaacacc aactaaaagt cccactaaaa
    11821 attcattagc accttcaagt tttaaagcat aaagacttaa aactggcaaa actataaaaa
    11881 gcccaaaaaa tcttgttcca actatgaaag ataagggtaa gacataattt agcattatca
    11941 atttcctatt aaatttgaaa tttaaattag gataatttta ctatgaaatg gattaagcat
    12001 tgattaacat cgttttatca tttgatattt aaaagctacg cacaaggata aattttataa
    12061 aatcatattt ttgtttttga tattattttg gagcttttgt tatgaagatt atcctagcta
    12121 cgagcaataa acataaagtt ttagaactta aagaaatttt aaaagatttt gaaatttatg
    12181 cttttgatga agttctaatg ccttttgaga ttgaagaaaa tggaaaaact tttaaagaaa
    12241 acgccttgat taaagcaaga gcggttttta atgctttgga tgaaaagcaa aaaaaagatt
    12301 ttatcgcttt aagtgatgat agtggcattt gtgtagatgt tttagaagga aatccaggaa
    12361 tttattctgc tcgatttagc ggtaagggcg atgataaaag taaccgtgat aaacttgtca
    12421 atgaaatgat aaaaaaaggt tttaaacaaa gtaaggcgca ttatgttgct gctattgcta
    12481 tggtaggttt gatgggggaa tttagtacgc atggaaccat gcatggaaaa gtaatagata
    12541 cagaaaaagg tgaaaatggt tttggttatg atagtctttt tattccaaag ggttttgata
    12601 aaaccttagc ccagcttagc gtggatgaga agaataacat ctctcatcgt tttaaagcct
    12661 tagagcttgc aaaaatcatt ttaaagattt taaacaaagg ataaaaatga aaaatttttt
    12721 aaaatatata gctattattg ttttaatata tgctctttat gttggtttgg aaacttggtt
    12781 ttcttagaat aaatagtgat taaaaagctt ggcaataaga acaaacttcc acttaaaagc
    12841 aaaatcatta caaaaacggt taaaattcca aaataaattg ttggaataaa attgctactc
    12901 atcataacac taaaacctaa aactatgcta atggtagtat aataaagtgc cgaacctata
    12961 ctaaggtgag aaatcataat ggcttcttct aggcttttgt ttttaatttc ttccctaaaa
    13021 cgataaatat aatgtatagc atcatcaacg cctataccta tagcaatagc agctatagta
    13081 atactcatca tatccaaagg aatacctaaa agccccataa gagcaaaaac cacacttaaa
    13141 ggaataacat ttaccaatat agccgcaact gaaaatttta aatctctaaa aacaatgata
    13201 aaaagtataa aaatagctaa aattacaaat ataagagtat caaattgcga tgaaaaaaga
    13261 ctttggagca tattgttata aagtaccatt atacctgtga tttgaacttc tactccatca
    13321 ttttttacaa gctcgttgag ctgtttttta agatctatta aaaattcatt acgtcttaaa
    13381 ttcggatcag aatcaacaat acgtatacta aatcttaact cgttattctc tatacttaca
    13441 aaaggtgaaa gcaagtcttg tttaaattta gcaggtaaat tctcatttaa aaacgcaaga
    13501 gcaaaatcat ctaactcttt tccatcgttg atatttttcc ctagggttaa aagactatta
    13561 agacttaaaa tcgagcctac aaattcttta ttttctaaaa attcatgaac tttttttgca
    13621 atgcgtgttt ttttagagtc aaaccaataa gtttcttgtg tggctaaatt ttcaaattcg
    13681 ctttcaaaac tatcaagagt attgcttgta ttttgatcgt ttttattatt tggaaaacga
    13741 atgatgactt ctaaaggcaa ggttccacct agatttttat caataaccaa aagtcctttt
    13801 ttgatttcac tgccatcttt gaaataattg acaaaagaat tttcaactct gagttttgaa
    13861 atgcctatta aagctaagat tatagcaaga actgaaattc cataaatcat gcgacgcttt
    13921 ttaggatcaa gagcggtttt agcacaaaag gctaaaagat taaatttaaa ctctttttta
    13981 tgatagtttt ttggttttaa aagaactaag atacttgcta aaaataaata actaaagata
    14041 agagctaaac ctatacctat actcatcata ataccaagtt ttatgatagg ttcgatattt
    14101 gaaagcatta aagaaaaaaa tcctatcatc gttgtaacaa tggcataaag gctaggattt
    14161 gctttggcta gtaaggtttc aagcactatg cgctcaactg tagctttggg atgattttgg
    14221 gtattttcga taaaatgcgt gatcaaatga acaactacac ttaaggtgat aattaaaacc
    14281 aaagcaatgt aatttgatga aataactgtg atttgaaaat ttaaaagtgc aaaaactcca
    14341 ctagctgcac ttaagcttat aaaacaaata aaaagaggta aaaaaacaaa gcgccatgaa
    14401 cggaaaaaat aataaagtgc aaatcctagt aaaaatacaa gagaaacacc atagagtaca
    14461 agatcagatt ttatataagt tatcatatca tcagcgatca tgcttacgcc accaaggtag
    14521 agcgtatctt tatttttttc ataatttcga actatgcttt taatagtatc tagactttgt
    14581 ttcgtgataa ctttttgctt gtcttgatgt ttttttatag caagacgaat ttgatctttt
    14641 tctttttcat cggtagcaag atcgcgtttt tctacaagat cattataaac tgtatcaggc
    14701 tttaagtaaa taataagccc tgttactttt ccatcttttg agatgatatt atttttataa
    14761 aagggactat ttaaaatttc atttcgggct tttgtgcggt ttatatcttg gctttctatg
    14821 tttgggatat tttttaacag ttcttttaaa tccgtatttt gtgaactttg aagcaaaggg
    14881 gcattgatga tgctaaaaac gcgctctact aaaggggcct tttctaattc ttcatgaagt
    14941 ttttttaatt tggctaaatt ttcatttgaa aaaggttttt catcataggg tttgaaggct
    15001 aaaagtaaaa aattatcact tttataatgt tttgaaattt ctctaaaagt ttttaaatct
    15061 gcatcatctt ctaaaagtaa actttcagca cttgcatcta cgctaagctt aaaagcaaaa
    15121 aagcttaaaa acaggcatat aaacaaggtt ccaaaaaaag tactttttgg acgagaaata
    15181 aaaaacttta aaagctttgc aaacattatt ctatgacaat actctcaagt ttttgaagta
    15241 gggcatcaaa gccttggttg gctaaaatat ctccaaattg tgatctataa gtttgtacta
    15301 tactcacacc taaaacatcc acatcataaa caagccagtt gttattatca ttgtaaaatt
    15361 tgaaaatgat atttttttct tccccatcta ctaccataga agtggttaaa aaatagcgtt
    15421 tttcattttt taactcacca tttttgacct ttaaaacctg atctttataa agactgagtt
    15481 tatcggtaaa acttttttta agacttgctt caaaggctgt ggtaaatttt tcttgttctt
    15541 ttggatttaa tttagaataa tttttcgaaa gactgagttt tgccatgagt ttataatcta
    15601 ttatgctatc aaaaagttta aaaattccat cagcagcttg ttttttgtct tctttgctat
    15661 cttgtaaaag ttttaagctt gcatcaatgt ttttttgcat agtactagaa atttcatcta
    15721 gctgtaaggc aaaagcatta aaaaataaag ccaagattaa aaatattttt ttcattattt
    15781 tcctttattt gctaagttca ttgcgtcttt gctcgtaagc atcacgcaag aatggatata
    15841 aattaggcgt gttgtgataa atttcatcaa tttcatcaag tctaaaacta agttcattac
    15901 caaatccata agcacttata gctatacttg cccaagtagg atcaatgtaa gcagtaaaac
    15961 ttgcatacca agttgcaggt aaagcaagag tatctctaag attactaggg ccgagtatag
    16021 gtaagacaat atgaaaaccg cttcctacac cccagtgagc caaaacggtt cctaagtccg
    16081 cgggatgttt tttaagaccc atttttgatg ccatatccat aagtccacca aagcccataa
    16141 tggtattggt ggtaaatctt ttaaattctt ctcccgcttc ttcaaattta aactgcaaaa
    16201 tattgcctac aaaacgcaaa ggaacaagta aattatcaaa gaaatttctt acccctaatc
    16261 ttataaattc aggagtgata gtgttatagc ccttaagaac gggacgcaaa ccataatcat
    16321 acaaagccac attaaaactt gtcatagctt tgttatatcc tgaaagtgga tcgtttactt
    16381 gatagttttg gtattcttgt tcgaaatcat ctaaattttg ttctttagca aaagcaaaaa
    16441 tagcaaaaaa aattaaaata aaagatataa attttattct caagcaaaaa ctcctaaaaa
    16501 ttttaaaagt aaaattatag caaattttta atcaagattt atatcccagt aaaaatccac
    16561 ccattcagta gcttctttta ctttaaaatc aggctctaaa agagcggttt ttttgtaaaa
    16621 aatggttgta attttaagtt ctatatgagg aaatttttca agcaaaactt tttttatttc
    16681 tgctaaactt tctccactat ctactatatc atcaatgagt agaatttttt tgtgcttgct
    16741 taaatcggga atgttaaaaa tttcaatagt atcaagtttt ttcgtattat cgtaatgaat
    16801 tgagtttaaa gcaaaaagtt gacgcgtttt taaagccact gctaaagagt gtcctaaact
    16861 catcccccct ctcgctatag ctaaaagtgc atcagggtta aaatcttctt taatttcttt
    16921 agcaagaatt tttacatctt ctttaaattc ttcataggag taaaatatca ttatatatcc
    16981 ttatttattg tagtgccata agtaaaaaat tacccaaaga taataaactt aaaactataa
    17041 tgccaagatt gattttatcc cattcgcgtt taaaaattct tacaagtaaa taagaaagaa
    17101 aaccaaaagc aaaacctgtg gtgatggagt aagtaaaagg catcatgatg atagtaaaaa
    17161 agcttgctgc agctatagca ctatctttaa aatctatatt tttaacttcc ataaacatta
    17221 aaattccaac cattacaagt acggggtata ttgcgtttgc aggaatggct ttaaaaagtg
    17281 gcagtaaaaa aagtgtaaaa gcaaaacaaa tagctacaac taaagctgta agcccagttc
    17341 ttcctccgct ttcaacccct gtagtgcttt caacaaaggc tgtaactgta gaagtgcctg
    17401 tcatagctcc taaggctgat cctgttgcat ctgccattaa ggttttgctt agtttttttt
    17461 ctccattttt gggatcatca aaaatctttc ctctttcacc cacacctgtg atagttccta
    17521 tgctatcaaa aagttgagtg ataaaaaaag taagaattat aggtatcata gtaatattta
    17581 aggcgctttt gatatcaagt tgtaaaaaga tggctcctaa accattttcc atgctaaaat
    17641 ttggccaaga aaagatttgc acaggaaaac ttgcattgtc taaatggaaa atccaagcaa
    17701 taatagagct tgctaatacc cccaaaataa aagctccgcg aagttttata gcccaaaaaa
    17761 agatgattaa agctagagta aaaattccaa aaagcacatg agggcttttg aaatttccta
    17821 tgctgactaa ggtatcttta ttatgcatta tcacacccat ttgacttaag cctaaaaatg
    17881 caataaaaca acctatgccc gcacaaattg caaggcgtaa atcttttggg atattgcgga
    17941 ttacccaaag gcgaaaatgc gtaaaagaaa gtatgagaaa aataatactt gaaataaaaa
    18001 cagctcctaa ggcactttgc caagctatgt tttgacctaa acaaaccgca aaggtaaaat
    18061 aagcatttaa acccattcct acactcatag ctacaggagt attggcaaaa aaagcattaa
    18121 aagcacttgc aactattgta attaaagctg ttgcggtgat taaagcttct atagacattc
    18181 ctgtatttcc tactatgcta gaatttacgg ggataatgta aaccatagct aaaaaagtag
    18241 taagtcctgc tataacttcg gttttaaaac tcgtattgtt ttctttgagt ttaaaaaagc
    18301 tcattttttc tccttagtag gtttttagct cattgtataa actatcgcgt tctacaggaa
    18361 taagatttga agtttttatc atatcgataa aagtttttaa acttgtgcct ttggcggact
    18421 ttgcaccacc tgcactttgt atactttctt tttctatagt gccgtctaaa tcattagctc
    18481 caaattcttg tgctaccatg gctaaattta aagtcattgt tgcccagtaa gctttgatat
    18541 ttttgatatt atcaagcact aaacgagaaa tggcaatggt ttttaaaatt tcttcactat
    18601 ccatgatttt atcagtttgt ataaagctat tatccctttg ccaaactaga gggataaaag
    18661 cattgaatcc accggtttga tcttgaagat cacgcagtct taacatatga tcgatcctgt
    18721 gatgtctttc ttctatatgt ccaaaaagca tggtagcatt actttgcttg cttttttcat
    18781 gccaaagttt atgaatttta agccaatttt cactgctaac ttttccatga caaattttct
    18841 tacgcacttc ttcatcaaaa atttcagctc caccgcctgg catggaatca acgccgtatt
    18901 caagcatttt ttctatcact tcttcataac tcattttaaa acgacgatgt aaaaaatcaa
    18961 tttcagcagc agtcatagct tttacatgaa gattaggata tttttctttt atcattttaa
    19021 aaatttctaa ataccattgc caagttgtat ctttgttgtg agctgaaacg atatgcactt
    19081 ctttggtttc tcgttttaca gtttcatcga cgattttcat gatttcttca tgagtcatca
    19141 aataaggatt aggatttttt cggtgcgctg aaaaggcgca aaatttacag gtgtctgcac
    19201 agatattagt tgggttgata tggcgattga tattaaaata gacttttttt ccatgaagtt
    19261 tagtgcgttt tttgtgagcg tatttgccta aggtaaaaag atctagatcc caaagtgcat
    19321 tggcttcttc ttggtttaat ctttcttcat tttctagttt ggtgattaaa tttttcattt
    19381 taattttact cttttgctgt ttttaaataa agcattataa tttttgctta ctgaaaaaga
    19441 gtttatagaa aaagccaaaa taaaagatat ttttgttaag attattatta aaatattaaa
    19501 attttaaaga gagtagaaat tttgttaaat aaagaattag aaatttttaa aaaaaatctt
    19561 agttcctata cccaaagttg tagaaaattt tttcttaagc aaggggcgtt tagcttatat
    19621 cattctaaaa atatggataa tttcataaaa aaagcttatg atatagttct taaagattat
    19681 tttgatgatt tttcacctcc aagtgataat atcccttttt gtgttttagc aagcaaagca
    19741 tatgcaaata atagtctttg ttttaatgaa agtatttctt tgatttttgt ttataaagat
    19801 attaaggctt ttcatttaaa acctatgatt aaggctttta tcgaaatttt aaatgatgcg
    19861 catttgcaaa ttgattcggt tatcttagaa tttaatggac tttataatgc tagcaatgag
    19921 cttaagactt ctataataca aactcgtttc atatgtggtt ctaggatttt atttaaaggg
    19981 attaagacaa aatttgagag tattttaaaa gaaaataaaa atgattttgc caagcttttg
    20041 ctagaaaatt ttaaagaatt tgacattcca tttataaagc aagaatttaa tatcttaaaa
    20101 gattttggcg gattaaatca tttaagatcc ttagagagtt tgcttgttct ttttaagact
    20161 tctccaaaaa attatgcttt aaattttata gatgaaaaaa atttaagcga gttgcgttta
    20221 gctggagatt ttttactttc tttaaaatca gcgatgaatt tattaagtgc taaagatgag
    20281 gatgaatttt tacttattaa tgttcatgat ttgagtgaat taatgtataa aaaagctaaa
    20341 aaacattttg gagcaaatga gttgttggtt caaaaggctt tgcaaagtat gcatactata
    20401 ggtttttata cacacttttt agcaaagcaa attcaagatg gattaaatca tactcttaaa
    20461 caagaatata aatttaaaac tcttgtggaa gttttagaat acttattaaa acttgaagat
    20521 aaacatgtta ttttcgatct taacttggtt tttgccctaa gaagattgaa atacggtaaa
    20581 aaagatatag aaaaagcttt aatacttttt gagaaaattt tttataaaag gcatagtttt
    20641 tgtgttttaa aacttttgct tgatagtgga attttaaaag atttatgtaa gcctttttgg
    20701 acagttcgtt ttttaagcga tgaagaagga aattatagtt ttgatgagca agtttttctt
    20761 atgttaagtg aatttgaaaa atacgaagat gagcttgaga tactccaaaa acttaaaacc
    20821 gatgaaaaaa tgattttaaa gcttgtgata cttttaagcg ctatagaaag tgaaaatgaa
    20881 atttctttag caggcatata tagagcgtat tgctctaaat ttgatttaaa gaatgaaatt
    20941 ttagaatggg gtcttaagat atttaaaaac aataatgcct taaaagatct tgtagaaaaa
    21001 gaagatatat acaatcctat tgttgtaagt agcttggttt ctaagctaga aaatttagaa
    21061 aatttagagc ttttatatac tttaacttgg ctaaaggcta aggctttaaa ttataatgct
    21121 ttttatttta gagttcttga taaactttta gaaaatgcaa aacaaggttt tgaagatgaa
    21181 aatctacttg aagaaagcgc aagaagagta aaaaaagaat taacacttaa aagaagtaag
    21241 atttttttag agcaagatga aattttgcaa gataaaatca tacatatcaa atcaaatctt
    21301 tttattataa aaaatacttt tgaagatatt gttatgattt ctaaattagc caaagaaaat
    21361 gattttaaat tttggtttaa taatgaaaca aatcttagtt tgcaaattgt tgcaccactt
    21421 cattttaata ttgccattat tttaagttct ttaacaaatt taaatcttat tttcatgaat
    21481 ttttttgaac tttttgataa taaaatttat ttaagatttg aatatgataa tattatcagt
    21541 gatgagcaaa aactaaaact ttgcgagctt ttaaattcaa atctttctgg ttttaatttg
    21601 aaaaaaatta aaaagccaat cattaaaaaa gatgagttaa aattagactt aaactattct
    21661 aaaatgtatg ccaaattagg tcttaatacg aaagatcagc agggtttaat ggcgtatttg
    21721 atgaatgttt ttaatgaact tgaacttgtt ttatgtgcag caaaaattca aaccataaga
    21781 caaaggacgc gtaatatttt tatttttcaa aagaatgaaa aattagaaca tagcgagcaa
    21841 aagttagtta atttattaat aagtgagtaa aaaaatgtgt ggaatcgtag gttatatagg
    21901 aaataatgaa aaaaaacaaa ttatactaaa tggacttaaa gaattggaat atcgtggcta
    21961 tgatagtgcg ggtatggcag tgatgcaaga aggagagctc agttttttta aagctgtagg
    22021 aaagcttgaa aatttggcga ataaatgcac ggattttgaa agtcaaggtt atggttttgc
    22081 tataggtcat acaagatggg caactcatgg taagcctact gaaatcaacg cacatcctca
    22141 tttaggacag tattcttgtg tgattcacaa tggtattata gaaaattata aagaaatcaa
    22201 agataaactt gaaaaagaag gcgtgagttt tttaagtcaa accgatacag aagttattgt
    22261 ccagcttttt gaattatatg caagaaattt gggagttttt gaagcttggc aaaaaaccat
    22321 caaagaactt cgcggtgctt ttgctacttt gttagtaaca aaaaaagatc ccaatcatgt
    22381 gtattttgca aaaaatgctg ctcctttgat tatcggtaaa aatgcaaata aagaatggta
    22441 tttttcttca ggtgatgcgc ctttgatagg aagttgtgat gaggtaatgt atcttgaaga
    22501 tttaagcttg ggatacgcga gtaaagatga gcttgtcgtt tatgaaaatg atattttaaa
    22561 atcactttgt ttttctaagc tttcaggcga taaggcttat gcaaaaaaag acggctttcg
    22621 tttttttatg gaaaaagaaa tttatgaaca aagtcgcgtg atgagtgaag ttttaatggg
    22681 gcgtattcaa ggcaatgaag tcgtttttga tgagctaaac aatgaagatt taagtcaagt
    22741 agatgaaatc acgctttgtg cttgtggaac aagctatcat gctgcaatgg caagtgctta
    22801 tttgtttgaa agaattgcta aagttaaagc taaagtagaa attgcaagtg aatttcgata
    22861 ccgtgaagca attataaaaa aagattcttt atttatcgtt atttctcaaa gtggagaaac
    22921 agcagacact ttagaggctt taaagattgc aaaagagcag ggtgctaaga cttttgcaat
    22981 ttgcaatgtg gataattcta atatagtgcg tttagcacat ctaagtcttt taactcgtgc
    23041 gggcatagaa aaaggagttg cttcaactaa agcttttgct actcaggttt taacactttg
    23101 gatgcttgct atttttatgg cacaaaaaag aaatttaaat gtttctgctg aaattaaagc
    23161 acttttgcat actccaaatt gcgtgagtgt aaaacaggct ttacatgaaa aaattcatcg
    23221 tttatccaag cgttatttag atggacatgg ctttttcttt ataggcagag atgtgtttta
    23281 tcctttggct ttagaaggag ctttgaaact taaagaatta tcttatcttc acgctgaggg
    23341 ttatcctgca ggagagatga aacatggccc tattgctttg gctgattcta agctttatac
    23401 tatagcttta atgccaaagc acatgcttta tgaaaaaaca aaatcaaatg ttgaagagct
    23461 tattgctagg gattctacag tgcttagcat ttcaccttta gaatttgatt taagtgatga
    23521 ttttataaaa accaatgagc aagatcatta tatgtgtgaa ttttttgaaa tgatggtcat
    23581 tactcaactt ttggcgatgg aaatttccat aagacttggc aatgatgtgg atatgccaag
    23641 aaatttggct aaaagcgtaa cggtagaata gaaatgaaaa aatttttttg tttaacttta
    23701 gtttgtaaac tttttgcttt aagcgaattt gaacttcatc atattgataa agtacataag
    23761 ctagggtata gtggagatac tattataata ggtgtagccg atgatgcttt taatcaagat
    23821 catattagtt taaaggataa gattttaaag tctacttatc ctactgatac agctgggaaa
    23881 cagcttatac ctgatttgaa aaaatcaaca cacggaagtc atgtagcagg tatagctgtt
    23941 ggagcaaaga taggcgatag caaaccttat ggagtggctt atggggcaaa attttatgga
    24001 gctggggtgt ttccaaatgg ctcttacact caaattcctg atatttataa ttttttcaaa
    24061 gatgtgagta ttattaataa tagctggggt attaattttt atccttattt taatcttaag
    24121 gcttcaaatt ctggattagt agattgtact caaactaatc aagggacaag ctataatatc
    24181 tgtaatactc ctttggaata tgttatgaaa gcagataagg ttgctaatga tatgatgagg
    24241 cttagcaagg acaagggagt attaaatgta tttgctgctg gtaatgaagg aattcttagc
    24301 cctgctttgc atgcgatttt accaagttat gatgaatctt taagagcttg gttggctgtt
    24361 ggagctttgg atgcaaatga gattacttta gaatcagatg ggactttaat aattaaaagt
    24421 caaggtttgg ctgattttag taatggtttt aagggggcta cgaatttttc tttagttgct
    24481 gctggagtaa atattaataa tgttgattca agcactaatg ataagtttac aaaaaaaagt
    24541 ggaacttcta tggcagcacc tatggtaagt ggaacagcgg cactggtcaa gcaaaatttc
    24601 ccctttttgg atggtaagca aattgctgat atactgttaa gtacagcaaa taaaaattat
    24661 aaggctccaa aatttactgt taaacaagta accgatggaa caaatcaacc taaatttctt
    24721 attgtgtata tttcgcaaga tccacctagg atagaagatg aaataaaacg ggatttaaaa
    24781 cagctttaca atggaatgca agttcaagtt aatggacaat ggattgatta tagtgattat
    24841 atttgggata atagagatag tgcgcagtca caaaaactta atacttctac tattagttct
    24901 attaatggag tagttagagt tgagaaagaa gaattatttg gacaaggaat tttagatgca
    24961 caaaaggcgt taaaaggact gagtatttta gatgcaaaca gactcagtga tcaggatgta
    25021 ttaaaatatg agcaagaacc taatacagct tattatacta taaacactgc aggttatgat
    25081 gctgaatttt ctaatgatat tagtcaaaga aaatgggatg aaagtactca tttatcaagt
    25141 gctattaata aacctacaca tttagctaat cttaacatag ggttatctaa agaaggtgaa
    25201 ggtattttga ttatcagtgg tcaaaatact tatgagggtg caactttaat caaacaagga
    25261 gaattaaagc ttaaaggaaa agttaaaaat aatgcttatg tagaacaaaa agcaatatta
    25321 agcggtaatg gtattgtagg gcaaaattta aacaataaag gcatagttag acctggaaat
    25381 gaagatttga atgatttaac cgtgcaagga acttatactc aagaaggagt tgattctaaa
    25441 ttgcaacttg attttggtaa ttataaaaat tctaaactga ttgcaaaaac ttatgatatt
    25501 aagagcggga atttagaata tattccttta cctaaatact atatcttaaa taagccagtg
    25561 aaaattaatt taggagattt ggaaaaaagt ttatcatctt ttaatcatgt tttgatacaa
    25621 aatacctatg ctttaaattt tgattttgtt ttaagtgatg atttagtgag tattaataaa
    25681 accttaataa aacctaattt aaagccaaat gcttacgaaa ttcctaatac aagcttggga
    25741 aatgctttaa gacaattgcg atctagggca gacttgagtc agacttatca ggaatttttt
    25801 gcttctttag ataatggaat agatgtaaag actaaattaa atagaataga aggttcaggg
    25861 tatttaagca cttttagtaa tcataatcaa tctaatttaa tgcaaaataa tatgttattt
    25921 acccttcatc ctcttaatat taataatttt gcacaaaaca ataatatctt acttgctagt
    25981 acttatttac ctagaatttt tagcaatgaa gaatattttt ggcatcttac tccaagttat
    26041 aaatactata aagataaaga tttttcaggt caaaaaacag gtgctaatat ctctttagga
    26101 gaaaatttct catcaggctt tttagcttat gctttatctc tttctagcgc taaatttaat
    26161 tttaataatg gtagtgattt gaagagttat aacatggatt tattgcttaa ttataaccat
    26221 gatttagatt ttataaaaat attaagtgga ttaggtatag gtgtaggatt taatactctt
    26281 aatcgttttg tagtagagca gccaattgaa ggcaaatata aaacattgca aacttcagcc
    26341 cagcttggtg taactaaaga tattatttta ggtcaagatt ttatttttaa tcctttaatg
    26401 tattttacac atagtttttt ttatcaagaa gattttaaag aaaataaaag tccttttgct
    26461 aaaaattatg aaagtttaaa acatcatagc ataaatgcaa atttaggttt taatcttgct
    26521 aaaaatatag agcaagatga ttatcaagct tctttttcta cttttgtaat ttttgaaaaa
    26581 agaatttatg gaagaacttt agaaaataag gctagttttg ttgattttcc tattgctttt
    26641 attcaaaaat ataaattaaa agataatatt ttaagtcaag gttttaattc agaattttta
    26701 tataaaaaca atgtattttg gcagtttatg ttaatgaata gattttctca taatgcctat
    26761 gaattgcatt taatgagttc agtgggaaaa cgtttttgaa agtatttatt tttttagctt
    26821 ataataaata aaattttaat caaaggaaaa aattatggaa tacagagttg aacatgatac
    26881 catgggtgaa gttaaggttc caaatgacaa atattgggga gctcaaactg aaagaagttt
    26941 tgaaaatttc aaaatcggtt gtgagaaaat gccaaaggtt ttaatctatg cttttgcaaa
    27001 tcttaaaaaa tctttagctt tggtcaataa caaacttggc aaacttgatg atgctaagaa
    27061 aaatgctata gttcaagctt gcgatgagat tatcgcaggt aaatttgatg ataattttcc
    27121 acttgcgatt tggcaaacag gttcaggcac acaaagcaat atgaatatga atgaagttat
    27181 tgcaaatcgt gccactgaaa tcatgggcgg ggattttcgc aaagaaaagc ttgtacatcc
    27241 aaatgatcat gttaatatga gtcaaagttc aaatgatact tttccaacag ctatgagtat
    27301 cgttgcggtt gagcaagtag agaaaaagct tatccctgcg cttgatgagc ttattgcaac
    27361 ttttgaaaaa aaagtaaaag aatttgatgg tattatcaag ataggacgca cgcatttaca
    27421 agatgctact ccacttactc tagcgcaaga atttagtgga tatctttcta tgcttttaca
    27481 ttcaaaagag caaatcatcg cttctttacc aactttaaga gaacttgcca taggaggaac
    27541 cgcagtggga acagggctta atgcacatcc agaattaagc caaaaagtaa gcgaagagct
    27601 aactcaactt ataggtacaa aatttatttc aagtccaaat aaatttcatg ctttaacaag
    27661 tcatgatgcg attaatttta ctcatggagc tatgaaaggt ttggctgcaa atttaatgaa
    27721 aattgcaaat gatataagat ggttagcttc gggtccaaga tgtggtcttg gtgagcttat
    27781 cattcctgaa aatgagccag gaagttcgat tatgccaggt aaggtaaatc ctacccagtg
    27841 tgaagctgtt actatggttg ctgtacaagt gatgggaaat gatgcagcta tcggatttgc
    27901 agcaagtcaa ggaaattttg aacttaatgt gtttaagcct gtgattattt ataatttctt
    27961 gcaaagtctt gatttgttgg ctgattctat gcattcattc aatatccatt gtgctgtagg
    28021 catagaacca aatcgtgtaa aaatcgatca taatcttcat aattctttaa tgctagttac
    28081 cgctctaaat ccacacatag gttatgaaaa cgctgctaaa gtggccaaaa atgctcataa
    28141 aaaaggtatt tctttaaaag aaagcgcaat ggagcttggt ttggttagtg aagaagattt
    28201 caataaattt gttgatccta ctaaaatgat aggctcaaaa gcctagaaca taaaacttgc
    28261 cttttttaag gcaagttaaa ttaaattctt atcttttaaa atcacataca ttcttaaagt
    28321 tgatacaaaa aaagttaaaa tcgcaggacc tagtataata ccccaaaaac caaaggttga
    28381 aattcctgct atcatggcca agaaaattaa aagttcgttg attttagtgg gagtttttac
    28441 aagttttttg ttgatccatt tgatgattaa aggtttgatt aaagtatctg ctataaaaga
    28501 aattacaatt acagaataaa taaaaataac aagagctgag ttaagattgt ttgaggcaaa
    28561 ttcataaaga cttacaggca cataaattaa agctcctcct atagcaggta tgagagaact
    28621 tacagcaaaa attactccca ttaaaattcc atcataacca taaaacattg tgattaaacc
    28681 aaaaagtgca ccttgaaata ttgctacaat taccatagag taaagcacaa cagccataac
    28741 attacccact tcgcttaaaa catcatcgag ttctttttta tcaataggaa tgatagattt
    28801 aagatagata acaagttctg ttccatatag atttgcaaag aaataaaaca cacaaattaa
    28861 aaccatatct ataagaaatt tagctcctga ttttgtaaaa cttgaagcat aacttagaat
    28921 ttgtttagaa atgctattta aatctataga agctaaaaat tctttgattt taggttctaa
    28981 aaaattaaag ctttcgggca aggtaaattg atagtttttg acataatcaa gtgtttgtgt
    29041 aactaaatta atatcaaaat tctttaaagc tttggcaagt tctatcatag cataaacaaa
    29101 aggtgcaaag aaaagcaaaa ccatacaagt tgttgtaaga atggaagcta aaaatttatg
    29161 ccctttagta agatttaaaa atttcgcatt gatatttgag gtagctaccg ccattaaact
    29221 agctatgata attacaagta aaaaaccttt aaaaaggtaa agcaaaagaa ataaaatgac
    29281 taaaataaag cttataagaa agaattttcc attttgcaaa atttactcct caaataaagt
    29341 tttttcatag tttaatttta aagcactata gcttttcgtg cttgctatac gcccttttgc
    29401 agtgcgttct atatagccat tagctaataa ataaggctcg attacatctt ctatggtatt
    29461 ttcatcttca cttaaagccg cagcaatgct tgcaagtccg ataggttttt gcttagcagc
    29521 ggttaaaagt tcaagatatc ttaaatccat cgcatcaaaa ccaagctcat taactcctaa
    29581 agaatttaag gcctcattag ctcttttttc tgtgataatt tcttcatcat taacatcggc
    29641 aaaatctctt acccttttta aaagccttag agctattcta ggggttgaac gacttctttt
    29701 agcgatctca agtgcggctt tttcttcgca agttttatta agttttaaag ctgctttttg
    29761 caagattagg gcaagttcgc tatctttgta aaattctaat ctaaattgca taccaaaacg
    29821 atcgcgcaaa ggattgctaa gcatacctgc acgagttgta gcccctataa gagtaaattt
    29881 tggtaaatcg atttttatgg tttgagcagc tgggccacta cctatgataa tatcaaggcg
    29941 gtaatcctcc attgcagggt aaagtacttc ttcgatagca gggcttaagc ggtgaatttc
    30001 atcgataaaa agtatatccc cttcgctaag attagttaaa atagcggcta aatctccgct
    30061 tttttctatc ataggagcgg cggttgtttt gatatttgca cccatttcat aggagatgat
    30121 attggctagt gttgtttttc caagtcctgc aggaccgcta aaaagtatat gatctaaaca
    30181 ttcgttgcgt tttttagctg cagctataaa gacatttaaa ttttttttaa tgctttcttg
    30241 acctatataa ccatcaaaat ttgaaggacg caacgaagtt tcgtaagttt catcaaagga
    30301 gtatttttct atttctacta ttctatccat atctttgctt atattttgga aaaattaaaa
    30361 taagatttta gctaaaattt gctagaattt acattaaact ttaatgatta tggtttaaaa
    30421 atgggaattt taacaaaatt agaattagat tatgaaattg acgatataga aaaattttta
    30481 caatttttta gaaccatgtg cgataggttt gaacctttaa tcatcaagct tggaagcgat
    30541 agcgtgcgtt ataaagaagc cataaaagag cttgaaactt tagcacacaa taccgcttgg
    30601 gcagcaagac gtttaaatct tgaagaagtg actgattttt gtgtattttg tgaagagatg
    30661 atggcgcaag caaatcgctt taacgggcct gctagtgatg aatttacgga ttggatgctt
    30721 ttgatgagtg atcaatttga aaaatattgt cgttcgtatg aaaatgatga ttctgtttta
    30781 gcggttttta atcctttaat tgttaatgtt ccaaatatta tttctaaata agggagcgac
    30841 ttggcttcga caggagtaag tctgcttaga tggcatgtcg ctttgggcaa agcgtaaaaa
    30901 gcccaaataa aattaaacgc aaacaacgtt aaattcgctc ctgcttacgc taaagctgcg
    30961 taagttcagt tgagcctgaa atttaagtca tactatctag cttaattttc ggtcattttt
    31021 gatagtgtag ccttgcgttt gacaagcgtt gaggtgaaat aaggtcttag ccttgctttt
    31081 gagttttgga agatgagcga agtagggtga agtagtcatc tttgctaagc atgtagaggt
    31141 ctttgtggga ttatttttgg acaggggttc gattcccctc gcttccacca tcacgctaat
    31201 tttaagtaaa tcataagttt atttcaaatt tttagaattt tttatatgaa gttaagaacg
    31261 atttattacc cttaaaactt tgatatatta ggttttataa tttttcatta aaa
//
LOCUS       DARATF010000004        30458 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.004, whole genome shotgun sequence.
ACCESSION   DARATF010000004 DARATF010000000
VERSION     DARATF010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30458
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.004"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(132..1169)
                     /locus_tag="SB502_000159"
     CDS             complement(132..1169)
                     /locus_tag="SB502_000159"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HEG0433656.1"
                     /translation="MKKLFICCLFIGVCMKKAKSRIAILGTGGTIAGFIDSTIATTGY
                     AAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDG
                     VVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVVNKE
                     AKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVIKAHT
                     KNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKD
                     VLKELLKKGLKVVVSSRVVAGCVAVSDSDEKLGFISAEDLNPQKARVLLMLALTKTSD
                     PKKIQEYFLKY"
     gene            complement(1223..2794)
                     /gene="recJ"
                     /locus_tag="SB502_000160"
     CDS             complement(1223..2794)
                     /gene="recJ"
                     /locus_tag="SB502_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEG0433657.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDILPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLVLTKENKTIEALFFNFDKEPELNQNISLLGSISKNE
                     FRGMVTPQFVVKEIL"
     gene            complement(2781..4412)
                     /locus_tag="SB502_000161"
     CDS             complement(2781..4412)
                     /locus_tag="SB502_000161"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEG0433658.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFA
                     RNVLKLKDVNSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEVKSVKERHRHRYEANPKYRADFEKYGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN"
     gene            4532..5155
                     /locus_tag="SB502_000162"
     CDS             4532..5155
                     /locus_tag="SB502_000162"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEG0433659.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            5275..6660
                     /locus_tag="SB502_000163"
     CDS             5275..6660
                     /locus_tag="SB502_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HEG0433660.1"
                     /translation="MDKQFFQDFLMLSQAHTIATLAILCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAEEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIYEG
                     DKQIREIQTFSNIILGLIPSNIITAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIA
                     MFIMFGVHFLLLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(6699..9068)
                     /locus_tag="SB502_000164"
     CDS             complement(6699..9068)
                     /locus_tag="SB502_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEG0433661.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYF
                     QKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDGGYEKPAKKISTLDSIEGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIHWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(9084..10412)
                     /locus_tag="SB502_000165"
     CDS             complement(9084..10412)
                     /locus_tag="SB502_000165"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0433662.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLIDDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEAIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ISHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDVRKCFDYNYYTKNVDAIFKRTFK"
     gene            10490..11392
                     /locus_tag="SB502_000166"
     CDS             10490..11392
                     /locus_tag="SB502_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0433663.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNKILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILIAKNKKAQIDLKSLFEKKLVQKEYLALAHGKIE
                     ENFIVDKAINLTKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKQQIESILDEKLNPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFDINSKINIKEIFNNSIK"
     gene            11505..12383
                     /locus_tag="SB502_000167"
     CDS             11505..12383
                     /locus_tag="SB502_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEG0433664.1"
                     /translation="MKFVNFIQGQKPNLGVLNSSGKIVSFDDLGIETNDMNEFIIHFD
                     KFKHKLTDLDSKIAYEIPQENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATAPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIKNINY"
     gene            12447..13361
                     /locus_tag="SB502_000168"
     CDS             12447..13361
                     /locus_tag="SB502_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEG0433665.1"
                     /translation="MKKIIMILCLSYANIVFAVDMITPIPNSISYDKEKAKLGKSLYM
                     DKSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNG
                     RAKDLAEQATVPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAVAE
                     FEKTLITPNSPFDRYLSGDQNAISTQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            13351..15129
                     /locus_tag="SB502_000169"
     CDS             13351..15129
                     /locus_tag="SB502_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEG0433666.1"
                     /translation="MTNKKSSFLIKFIILSTLVLAFILVLLGIIFNNYSSSKDNKELI
                     NIVQQLEISDEKINSVFQNSFNFINYDPSVQAIKKMQENFTKLKTFGIDINKAEEIFN
                     AKLIQLNYFKSANSIAVNSKLYLFELAKNYFEELEQNHETNKNNYKTMSSMLSVLSTE
                     NILQKTTLNQLNNLMKEIKNDTKSENLQLFLKHYNMIVKQISIMQDNSSIYENNSLMK
                     ELKQLNTFTQNTIEQSNLFKFYIALAVFGITLVLFVFFILLTLKKVIMPIHTLEKLSA
                     NLASKEANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKN
                     NSMMLENSSNSQHEQIQGVKEITHVLDDHINLAGNLAQESIENMQDMHILMDKVELTL
                     SELVNLINENNEKEQNIVANMDNLTQSADNIIEITNSIKDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVGQLADKTSKSLLNINATVNTIVQQINDNKALMDLIHDSMKETS
                     SKTNDLQQELVNSMHKLESSIESTQTMKDKSMEVKDKMLILGTNIDKVNELANSVKDL
                     SCEINNISQNVLNGASKLSEKLSSFQ"
     gene            15235..15402
                     /gene="dba"
                     /locus_tag="SB502_000170"
     CDS             15235..15402
                     /gene="dba"
                     /locus_tag="SB502_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HEG0433667.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            15414..16940
                     /gene="dsbI"
                     /locus_tag="SB502_000171"
     CDS             15414..16940
                     /gene="dsbI"
                     /locus_tag="SB502_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HEG0433668.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL
                     ISAIIVASNVFQAFISTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(16961..17635)
                     /gene="queC"
                     /locus_tag="SB502_000172"
     CDS             complement(16961..17635)
                     /gene="queC"
                     /locus_tag="SB502_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEG0433669.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            17711..18937
                     /locus_tag="SB502_000173"
     CDS             17711..18937
                     /locus_tag="SB502_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEG0433670.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINERILPFVPEGLRGEFSYILGIREGRNGESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            19029..19553
                     /locus_tag="SB502_000174"
     CDS             19029..19553
                     /locus_tag="SB502_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HEG0433671.1"
                     /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWP
                     ADALERVTPPKIFLEQLGLPTDWIYMFSGMQMPLSIFIVHVGFSIIFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIVMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(19565..21241)
                     /gene="ilvD"
                     /locus_tag="SB502_000175"
     CDS             complement(19565..21241)
                     /gene="ilvD"
                     /locus_tag="SB502_000175"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEG0433672.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNNYAKIIKDEICKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSIE
                     TVMNAHQLDALICVPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYEAKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVMAEISSRQ
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAEQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANVSEEEIAKRKKEFALPQKEVSSRWLRMYQKLVSNASKGAVLDME"
     gene            21401..22048
                     /locus_tag="SB502_000176"
     CDS             21401..22048
                     /locus_tag="SB502_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HEG0433673.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            22113..22352
                     /locus_tag="SB502_000177"
     CDS             22113..22352
                     /locus_tag="SB502_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEG0433674.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITIE"
     gene            22385..22960
                     /locus_tag="SB502_000178"
     CDS             22385..22960
                     /locus_tag="SB502_000178"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEG0433675.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKQL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKKGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADASILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKEFIAKFGICKLHRKSFKLL"
     gene            complement(22961..24406)
                     /locus_tag="SB502_000179"
     CDS             complement(22961..24406)
                     /locus_tag="SB502_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEG0433676.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNYKEFTIPLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGTSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAVIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKNGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKTHVECVEANDLKREFKEGKA
                     INVEISNSKKTYKADLVLLAMGFSGCEEAIAKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(24416..28906)
                     /gene="gltB"
                     /locus_tag="SB502_000180"
     CDS             complement(24416..28906)
                     /gene="gltB"
                     /locus_tag="SB502_000180"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEG0433677.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIVNKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKHANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIVGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHITYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
     gene            complement(29040..30347)
                     /locus_tag="SB502_000181"
     CDS             complement(29040..30347)
                     /locus_tag="SB502_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEG0433678.1"
                     /translation="MILTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGVFSHL
                     ELVDTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLL
                     LSIALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLP
                     VGFGLTFQDLLKDNLNANNVSVSLNDVTNTMYFAAICMIAGLFLALFVFYRKSREYQE
                     VEIAKVDLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSK
                     VNEVFDDGLKMMGFIAFVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFML
                     LIGLIITMGIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASET
                     TMGTTVGLNADKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT        10327 a         5513 c         4349 g        10269 t
ORIGIN      
        1 tggtgggttt aaaaatgggg gctatatttt aatgataata aaaaatacaa gatataatat
       61 actattaata ggattgaaag gcttgactta gggaagataa gttccctaag tttagaaata
      121 tttaaaaaat tttaatattt taaaaaatac tcttgaattt ttttaggatc acttgttttt
      181 gtaagtgcta acataagcaa aactcttgct ttttgaggat ttaaatcttc agcactaata
      241 aaacctaatt tttcatctga atcactcaca gcaacacaac ctgctacaac ccttgaactt
      301 acaacaacct taagcccttt ttttaaaagc tcttttaaaa catctttttg atttttgtgt
      361 atacttcctg ctccacttcc tgcaacaact atgcccttag ttccatgttc aaataaagct
      421 tttgcagcga caccactacc atcatttgaa tagctataaa gaatatctac ttttggcaaa
      481 cttgtgagtt tgcttacatc aaaaggagcg ttttttgtgt gagctttaat aacattatta
      541 tagaaaaaga ctttaccatc tactatataa cccaaatccc caaaatcagg agaagagaaa
      601 gcatcaacat ttaaactatg agtttttact acgcctctag cgcttaaaat tttatcattt
      661 atagctacca taacaccctt attcttagct tctttattga caactaatgc cactgcatta
      721 taaagatttt tcggaccatc cgcacttata gcagttgatg gacgcatagc gccaactaga
      781 actacgggct tatcactttt aatggttaaa tttaaaaaat aagcagtttc ttccatagta
      841 tcagtaccat gagttatcac cacaccgtct atcccctcag caaaaagctt agcaattttt
      901 ttagcaagcc ttaaccaaat ttcatcacac atatttgaac tatcaatatt tgctatttgc
      961 tcccaactaa tatctgctaa atctctaatt tgcggaactg ctttaattaa tacatctata
     1021 tcaatggctc cggccgcata tcctgttgta gcaatagtgc tatcaatgaa gcctgctatc
     1081 gttccgcctg ttcctaaaat agcaatcctt gatttagctt ttttcataca tactcctata
     1141 aaaagacaac atataaataa ttttttaatc tcttgtatat taatttttta atgttattaa
     1201 tgcaaattat aagtaaaaat ttttataaaa tctctttaac aacaaactgt ggagttacca
     1261 ttcccctaaa ttcattctta gaaatacttc caagcaaaga aatattttga ttcaattctg
     1321 gctctttatc aaaattaaaa aataaagctt ctatggtttt attttcctta gttaaaacaa
     1381 gctttaagtg tttttcatct ttacctagaa gttttttatt ttttacacaa agattttcta
     1441 aaacaaaaaa aggtcgtgga tttttatgtc caaaaggttc aaaagattct aaaatttcaa
     1501 gcatttcaaa atcaatttcg ctaggttcta agattcctaa aatttcatct gtatccaaaa
     1561 attcactttc agaaatttgc gaacattctt ttttgatttt atttttaaat tgttcaaaat
     1621 tttcagagtt taaactgatt ccagcagcac ctttatggcc accataattg cttaatatag
     1681 aatttgtctt agaaattaaa gctaaaatat caatcttgcc aacacttctt gcgctgcctt
     1741 ttaagtgttc ttcattttga gaaaatacaa aagcaggttt attaaaatgt ttagctaaac
     1801 gacttgccac aatccctaaa acaccttcat gccaatttaa acccgatacc acaatacaag
     1861 aatcgttttc atcgatttga tttaaactat cttcaaaaag ctgtttttct tcatctttac
     1921 gactttcatt aaaactaaca atttgctcta gatattctaa agctttatta aaatctttag
     1981 tgtgtaaaaa ttcataagaa atacttgcat catccattct tccagcacta tttataagcg
     2041 gagcaattaa aaatcctata ttatcaagag caaatttatc cttttgataa taatgcttaa
     2101 tagcccgaaa agcagccctt ttagatttgt taatatgatc tataccacgc cttactaaag
     2161 cacgatttaa atctctaagt tccatcatat ctgcaacaat tgcaatcgcc aaaagttcta
     2221 aaaatttaca catgtcatat ttaagcttgc acacctcttt taaagccgct atcaaatacc
     2281 atgcgacttg agctccacaa atttcaattt ctggaaaatc acaatctttt tgctttggat
     2341 tgataatggc aaaagcatca ggtaaaatat cttgaggcat atgatgatca gtgataatca
     2401 aatctatatt tttttcttta cagagtttgg ctgcttcaag agcagctatt ccattatcta
     2461 ctgttattat taaatttaca tcaagttcgt tgatgatctc agcatttaat ccatatccat
     2521 ctttaaaacg attcggaatt cttataatat aatcaaaacc tatatcatcg aaaaattctg
     2581 ccataataac acaagaaatg attccatcaa catcataatc tcctactata gcgactttct
     2641 catttttttc tacagcttct ttgatgcgat tagctgcttt atatgcatcc tttaaacagc
     2701 atggcaaagg cagatcacaa agtttggtat gcaaatcttt ttcaaagcgt gaagccaaaa
     2761 tttttttaat ttcattttta ttaattatct tcatagttta tagctgcctt gataaaactg
     2821 caaatcacag gattaacatg ctcaagtctt gatgtaaatt ctggatgaaa ctgcacagcc
     2881 aagaaaaaag gatgacagtt aagctcaact gcttcaatca atcctttgct ttcaccactt
     2941 acaatcaaac cgtatttttc aaaatctgct ctatattttg gatttgcttc atagcgatga
     3001 cgatggcgtt cttttacact ctttacttca ttataaacct tagccaaaag ggatttttcc
     3061 ttgatatcac atttataagc ccctaaacgc atagttccac ctaaaggagt ttttgcagta
     3121 cgaatttgtt tttctccatt tgtatccata aattcatcaa tcaaataaac cacaggattt
     3181 tggcattttt cattaaattc acttgaattt acatctttaa gttttaatac atttctagca
     3241 aattccacca aagcaagctg catacctaaa caaattccta aaaaaggaat tttattttct
     3301 cttgcgtatt gaatggcttt tatcttacct tctacaccac gatatccaaa tcccccagca
     3361 accaaaattc cactcacatc tttaaatact tcagaacttt ccatattttc aagtttttca
     3421 ctatctaccc attttaactc cactttagta tctagggctg cacctgcatg tataatagct
     3481 tcagtaaggc ttttataact ttcttttaaa tccacatatt tgcctacaaa agcgatttta
     3541 acttcattgc ttggagctat aactcttttt accaaagagt cccaattttc catattaggt
     3601 tttaaatttt tcaaatccaa aatttcagca atagggctta aaatatcttg ctttaaaaaa
     3661 ttaagtggaa tttgataaat actagccgca tcaacacttt ctatcacgca atttttttcc
     3721 accccgcaag aaatagcaat tttatctttt aaatctctat caagagcttt ttcactacga
     3781 caaataatca tatcaggact aatgcctatg cgccttaact cgcctacact atgttgagtt
     3841 ggctttgttt ttaattcccc tgcagcctta ataaaaggta ctagagtaag atgaatattc
     3901 atagcattat ttttacccac ttccaaacgc aaagcacgaa tagcttctaa aaaaggcaag
     3961 ccttctatat ccccaacagt tccgcctatt tcaacgataa gtatatcttt gccttctcct
     4021 gcttttttaa tgcgatcttt gatttctcct actatatgag ggataacttg aatggttttg
     4081 ccaagatatt ctccacgcct ttctttttca atcacacttt gataaacccg tcctgtagtg
     4141 aagttattat cttgagataa actctcatcc aaaaaacgct cataatgccc caaatcaaga
     4201 tccgtttctg ctccatcatc agttacaaaa acctctccat gctcaaaagg actcatagtg
     4261 cctggatcaa cattgatata aggatcagct tttaaaatac tcactttaag ccctgaattt
     4321 tttaaaagtg ttgcgataga agcagcggct atccctttac ccaaagaact taaaactcca
     4381 cctgttacaa aaatatattt tgtttgtttc attgacaata agccttattt ttttatctaa
     4441 ttatagcttg ataaaacttt ttatttcatt agaattttaa gtaaaaaatg caagaattac
     4501 aaaaaatatt tttatcaaaa aaggaataag catgcaaatc actttacttt ttcacactcc
     4561 attatctgtt tgttctcatg caacaagaac ttgttggcaa agctttgaaa aaggcgattg
     4621 cggtggcgaa aaagataaag aacttatcga tcgcgtgggt aataaattca aacacgcttc
     4681 aaccttagaa catctaaact atacttttta tatacaagga atttcaagag cttgcttaca
     4741 agaagttgca agacaccgtc acactagtcc tagtgtaaaa agcacgcgtt ataccttaaa
     4801 agaacttcgc aatgaagctg aatttaaaat aggagatttt gaaaatgcaa gccgttatct
     4861 tgtgctttgt ggtaatgaag aggttgataa cgcaagcatt aaagccttag aaaatttacg
     4921 cactatttta caaaaaagca ttagtctaga tatagccaaa tactgcttac cagaaagcta
     4981 taaaaccgaa cttacactaa cgattaatgc aagaagttta caaaatttta tatctttgcg
     5041 tagttcaaaa tcagctcttt gggagattag aaatttagca aatgctttat ttgaagcctt
     5101 accacaagaa cacaaattta tatttgaaca ttgcctacat aaagatatag aataaatcat
     5161 actaatttta tcttatttaa aatattttta tgctaccatt tataaaatca agctttatgc
     5221 aagtatattt tcatatacct tgtgcttgat tatagtttct tataaggact ttttatggat
     5281 aaacaatttt ttcaagattt tctaatgctt tcacaagctc atactatagc tactcttgct
     5341 atactttgtg ttgtttttta cgcattaaaa aaaatgcggg atataaaaat caatttttct
     5401 cttcgcatgc tatttgcgct tttaatgggt ttggggtttg gttttgcttt gcaatatttg
     5461 gcaaattttc cagatgctga agaagcaagc aatattcttt ggtatagtga aacaaaacat
     5521 tggtttgcat ttgtaagttc tgtttttgta gcttttataa aaatgctagt tgttcctctt
     5581 gtaagcattt gcattataaa agtaattata gaaattgata aaaatatcaa aatatcttcc
     5641 ttgcttggaa taagtctttt ttggatactc tttagcacag ccatagctgc aaccttgggt
     5701 atatttttag gttatagttt tgatttagga agtaattttg ctatatatga aggagataaa
     5761 caaattcgcg aaattcaaac tttttcaaat attatactag ggctaatacc tagcaacatc
     5821 attacagcta ttaataaaga aaatattata gctattgtca ttttttcttt ttttatagga
     5881 attagtgcta aaaaaatttc taaaaaagaa gagtatgaac aagcctttaa aagttttcat
     5941 aattttatcc taacctttta taatattatg atgaacatga ctgctacagt cattagattt
     6001 atgccttatg ctgtagtttg tatgatggct aatgtgcttt taagcaatgg ttttgaagct
     6061 atcaaaacag ctggactttt tataatgctt atttatatag ccatgtttat aatgtttggg
     6121 gtgcattttt tacttcttgc ttcacaaggg ttaaacccta taaaatatgc aaaaaaagcc
     6181 tttcctgtat ggttatttgc atttagctca agatcttctt taggcacttt gcctatgacc
     6241 acttcaactt tgcaaaataa atttggagtt aattcagcta tagctaattt tgtagcatct
     6301 ataggtacaa caacaggact taatggttgt gcgggatatt ttccagcttt agcggcagtt
     6361 tttgtagctt ttgctacaca tacacatatt gattttacat ttgctttaat gatagttttg
     6421 gtagctgtta ttggatcctt gggtatagct ggggtacctg gaagtgcaac tatggcagct
     6481 tctattatgc tagcagggat tggatttggt aataattttg tcatgctaag tttgatttta
     6541 gccatagatc ctattataga tatggcaaga acagcaagca atgtctcagg agctatgact
     6601 tcggcacttt gtactgcaaa aaatctaaaa gctctagata aagaaattta caattcttaa
     6661 tcttttaaaa cccaatgctt ttcattgggt tttagtattt attggcaacc ttcacattct
     6721 atgctacgat ctgcaacatt gactttttca ctatcagggc tttcgcttct tagataataa
     6781 gtagatttta ctccgagctc ccaagcgagt tgataaattt catttaaata tcccccactt
     6841 gctttatcaa gtgataaaaa gatatttaaa ctctgccctt gatcgatcca tttaccacgc
     6901 acagcagcag cctttacaag aattttttga tcaagttcat aggctggagt atagtattgc
     6961 caagtatcaa ggcttaaatt tggcacaaca acaggtatca taccacttaa attttgttca
     7021 aaccactttc ttttgtaaac aggttctata gtctgcgtag tacccaccaa gatagaaata
     7081 gaagaagtag gcgcaatggc catcaaataa ccatttctca taccatcttt tttaactttt
     7141 tctctaagtt taacccagtc gcattcactt tgatcaaata agccttctct taaagttaaa
     7201 gctttagcct taggacttgc tacatcaata ggaaaaatcc ccttgctcca atttgatcct
     7261 tcaaaatctt cataagaacc tttttcaaga gctaaatttg aactcgcatt aatagcctca
     7321 aagctaattt gctccataat ctcatcgatt ttatttaaat gctcatcgct tccccaatga
     7381 atcttagcct cagcaagcat ttgtgcctcg cccataactc caagacctat ggcacgagat
     7441 tttaaatttg tatcttttac ttttctatga ggataaaaat ttaaatcaat tacattatca
     7501 agcatacgaa tagctgttgg aacaacacgc tctatatctt ctttagtata tactttgcta
     7561 agatttatac ttgctaaatt acaaacggct gtttttccat catttttata tttttccact
     7621 atataaactt tattaccttc aatactatct aaagttgaga tttttttggc tggtttttca
     7681 tatcccccat cgatcacaac cttttgctct tcatcaaaat gaagctcatc tccattttca
     7741 aaaactactt taatttgata ataatttggc tcggtatttt gaaaaatttc agtacataaa
     7801 tttgaacttc taataattcc tacatgagca tttggatttg ctctgttggc actatcttta
     7861 aaacataaaa atggcaagcc tgtttcaaaa taatttagca aaattttctt ccaaagctct
     7921 ttagcttcta cgatttcttt ggtaatgctt tcatcttttt catattcttc atagcgtttt
     7981 tcaaaagctt caccatacaa atcacacaaa tccgctgtat ctgcaggatc aaaaagagtc
     8041 catttatcat tagctcttac tctcttcatg aaaagatcat tgatccataa agcagggaaa
     8101 agttcatgag cacggcgtct ttcttcacct gaatttttac gcaaatcgat aaaatcactt
     8161 atatccatgt gccaaggttc tatataaacg gctatagctc cttttctggt tcctagttga
     8221 tctactgcca cagcaatatc gttggtaatt ttcaagaaag gtataatccc tcctgcggca
     8281 tttttatgcc catctatgct tccacccata gcacgcactt tagaccaatc ccaacctata
     8341 ccaccaccaa atttagaaag caaagccatt tcttggtaag aatcaaaaat accttcaata
     8401 ttatcagggg ttgatcctat ataacaagaa ctaagctgat ggcgcgttgt tcttgcatta
     8461 gataaagtcg gagttgcaag catgagttca aatttagaaa taagatcgta aaatttcttc
     8521 gcccattctt gaggattaaa ttcattctgc gctaaaaaca tcgcaatggc cataaacatt
     8581 tgttgaggaa gttctatagg cataccttta ctatctttaa tcaagtatct atcatataaa
     8641 gttttaatac caagataagt aaattgcata tcgcgttcag gtttaatata agcatttaaa
     8701 tcatctaaat catatttttc tttaagacca agtaaaattc ttccttcttt ttcacccttt
     8761 tgaaaatact cacgcaaatg attatagcga ttcataccat taactttttt atataaatca
     8821 aataaaaaaa gtctagctgc aacaaaggtc caatttggac aatcaatatc tatcttatct
     8881 actgcagttt taattaaagt tttttgaatt tcttcagttg aaattccatc acgaaattga
     8941 atctttgcat caagttcaag ttcgcttaaa ttcacacctt ctaaatcttt tacagcatca
     9001 gaggtgcatt ttttgatctt agaaacatcc aattcttctg tacgaccatt tcttttaata
     9061 actttcattg ccttccttgc tttttattta aatgttcttt taaaaattgc atcaacattt
     9121 tttgtatagt agttataatc gaaacatttt cttacatcct cttcgctcaa actttttctt
     9181 aaatcttcat cgcttaaaag cgctaacaaa aacaaacttt catttttttc attgatagca
     9241 gccttgccat tttgcaaatc tgcccaaact ttcatagcgt ttctttgaac tattttataa
     9301 gcttcttcac ggctaatgcc tttaaatgga agttctaaaa gcaccctccc tgaaaataca
     9361 agcccgcctg taagatttaa atttttcatc atattttcag gataaaccaa aagcttatca
     9421 atcaaatttg taagacgcat aagcataaaa tcagccgtga taaaagcatc aggcaaaata
     9481 aatctttcaa cactagaatg agatatatct ctttcatgcc aaagtgcaac attttccaaa
     9541 gctggagtta caaaagatct aagcacacga caaagtcctg tgatattttc acttaaaaca
     9601 ggatttcttt tatgtggcat agctgaactt cctttttgtc ctacactaaa atactcctca
     9661 gcctcataaa cttcagttct ttgaaaatgt cttatggcta cagcgatttg ctcacaactt
     9721 gaagctaaaa tcgcaatagc agaaataacc tgagcataac gatctctttg gatcacttga
     9781 tttgaaacag gagcggcctt aagacctaaa tttttacaaa cttcttcttc aaattctaaa
     9841 ggagcatgag caaaatttcc cattgcaccg ctgatttttc catagcttat cacttctttt
     9901 gcatgttcta aaagctcttt tgcatgcgaa atttcatcat accaaatagc taacaccaaa
     9961 ccaaaagtaa taggttctcc atgaattcca tgacttcttc ctaccattaa ggtgttttta
    10021 tgctccaaag cacgcttttt gatcgcttct aaaagcaaag aaacatcttc taaaataagc
    10081 tccaaactct cttttatctg taaagcaaca gctgtatcta tacaatcaga acttgtcatt
    10141 gcataatgca caaaacgact ctcttctccc aaactttcac ttacacttgt aagaaaagct
    10201 ataacatcat gttttgtggt tttttctatt tcgtctattc ttgcaatatc aaattttgca
    10261 tttttaagaa ttttttcgca gtctgtgtca tcaatgagac cgagtttgtt ccaagctttt
    10321 acagcggcta attctacttt taaccacgca tcgtattttg cttgcatgtc ccatttttta
    10381 gccatgattt ctctgctata tctttcaacc atctttgaaa cctttttagc tataatttta
    10441 tattttaaaa aacagaaatt atatcaaatt atcctaagaa agttattaaa tggcctacat
    10501 aaaaataaaa ctctcaaaca atggaaaaaa ggcgtttcaa gtccttatgg aaaatttaaa
    10561 aattagcata aatgaagcac aaaaactcat agacaaaaaa agactttttt gtgatggaat
    10621 tttagtagaa gaaaagaata aaattttaaa tggtttagta gagcttatag tctatgaaaa
    10681 caatcccaaa ggagtagaaa ttgtctttga aaatgaagac tttgccatac ttgaaaaaga
    10741 aagtgggatc ttaagccatc caaatggtag acattgcaaa tacagtctta gtgatgaaat
    10801 ttggcatctt tggggaaaag aagcttgcgt agcacacagg ctcgataaag aaacgagcgg
    10861 acttatactt atagccaaaa ataaaaaagc tcaaattgat cttaaaagct tgtttgaaaa
    10921 aaaactagtt caaaaagaat accttgctct agctcatgga aaaatagaag aaaattttat
    10981 agttgataaa gctataaatt taactaaaaa ctacgatgat gtaaaaacaa gaatgcaaat
    11041 ttgcaaagaa ggaaaacaag ctatcactga atttgaaatt ttagaatact ttcctaaaat
    11101 caacgctact cttttacttt gtaaaccctt aacaggcaga caacatcaaa taagagtgca
    11161 tttacactat aaaaatcata ccattttagg cgatccactt tatgggctta gcaaacaaca
    11221 aatcgaaagt attttagatg aaaaattaaa tcctaaagaa cgcttaaaac ttacaggtgc
    11281 cttgcgtttg tgtttgcatt cttatcgttt gaaatttcaa tataaaaatc aaaattttga
    11341 tatcaactca aaaataaaca taaaagaaat tttcaacaat tccataaaat aaaatgatgt
    11401 ttcactacgc tacaatcaat cactttttta ccaaatttta aaacaaaaaa ataattcttg
    11461 ctaaaacttt aagtataatt aaataaaaaa gcgagatttt ccaaatgaaa tttgttaatt
    11521 ttatacaggg tcaaaaaccc aatctaggag tactaaattc tagtggaaaa attgtaagtt
    11581 ttgatgatct tggcattgaa actaacgata tgaatgaatt tattatccat tttgataaat
    11641 ttaaacacaa acttacagac ttggattcta aaatagccta tgaaattcca caagaaaatt
    11701 atctagcccc tattatagaa cctcgtcaag atattatatg tcttgggatt aattttttag
    11761 atcatgccaa agaatctgcc aaatttaagg gtgaaaaatt tgaagaaaga gaatatcctg
    11821 tatattttgg aaaacgctgc aatcaagcta cggcaccttt tggcgatata cctttacatg
    11881 cagatgtaac ttctcagctt gattatgaat gtgagcttgc atttatttta agtaaagatg
    11941 cttataaaat caaagctaaa gatgcaaaag attatatctt tggctatact attatcaatg
    12001 aaatttcagc tcgcgaactt caaaaacgcc acaaacaatt ctaccgagca aaaagtcttg
    12061 aaggtagcac tataatggga ccttatatca caagcgtaga tgaaatttct tatcctccta
    12121 aactccaact tcaaagctat gtcaatgatg aactacgcca aaactctaac actcaattgt
    12181 ttatttttga tattgcttat gtcttagaag aacttagcgc aggcatgctt ttaaaagctg
    12241 gaagtattat atctatggga actcctagtg gagtaggtat ggggttaaat ccacctactt
    12301 ttttaaaatc aggagataaa gtacgttgcg tcatagaaaa tttaggagaa ctttgcaata
    12361 aaataaaaaa tatcaattat taaacaattt actaaaatta cactataatg gcattttaaa
    12421 aacttaaatt aaggcagaaa tttaccatga aaaaaataat aatgatttta tgtttatctt
    12481 atgcaaatat agtctttgca gtagatatga taacccctat tccaaattcc atctcttatg
    12541 ataaagaaaa agctaaactt ggaaaaagtc tttatatgga taaaagttta tccaaagatg
    12601 gaaaagtttc gtgcaatact tgccataggc ttgatcaaca cggcgttgat ggacttgaat
    12661 tttcaatagg agttgataat caactcgata aaccctttaa cactcctaca acctttaatt
    12721 ctgtatttaa ttttgtgcaa ttttggaatg gtagagctaa agatttagca gaacaagcta
    12781 cagtaccttt tttcaatcct aaagaaatgg ggctaagtcc tgaacttctt ttacaaaaag
    12841 ttaattcaaa tgaaaattat gtaaaaactt ttaaaaaact ttatggagaa gttacggtag
    12901 aaaacatagc ccttgcagtt gctgaatttg aaaaaacctt aatcacacca aattctcctt
    12961 ttgatcgcta tcttagcggg gatcaaaatg ctatttcaac tcaagctaaa aaaggttacg
    13021 aagattttaa agctaatggc tgcatctctt gccatcaagg tcaaaatata ggtgggaata
    13081 tgtttcaaaa aatcggtatt tttgaagaat acccaaacca agaagattta gggcgctatg
    13141 aaatcacaaa aagagaagct gataaaatgg tatttaaagt tcctagtctt agaaatatag
    13201 ccaaaaccgc accttatttt catgatggat ctatacctac tttagatgct tgtgttcagt
    13261 ttatggctta ctatcaacta ggaaaatttt tagatcaaga aacagttgac aatatagttg
    13321 cattcttaga aagcttaaca ggagaatatc atgacaaata aaaaaagttc atttttgata
    13381 aaatttatta ttttatctac actagtttta gctttcattc ttgttttgtt aggtattatt
    13441 tttaataact attcttcatc taaagataat aaagaattga taaacatagt tcaacaacta
    13501 gaaatttcag atgaaaaaat caattctgtt tttcaaaata gttttaattt tatcaactac
    13561 gatccaagtg ttcaagcaat aaaaaaaatg caagaaaact ttacaaaact taaaactttt
    13621 gggattgaca taaacaaagc agaagaaatt tttaatgcca aactaatcca gcttaattat
    13681 tttaaatccg caaattccat agcagtaaat tcaaaacttt atttatttga actagctaaa
    13741 aattattttg aagaattgga acaaaaccat gaaacaaata aaaacaacta taaaacaatg
    13801 agttctatgt taagcgttct ttcaactgaa aatattttac aaaaaacaac actaaatcaa
    13861 ctcaacaatc ttatgaaaga aatcaaaaat gatacaaaaa gtgaaaattt acaacttttt
    13921 ttaaaacact ataacatgat tgtaaagcaa atttctatta tgcaagataa ttcttctatt
    13981 tatgagaata attctctcat gaaagagtta aaacaactta acacttttac ccaaaatact
    14041 atagaacaat ctaatttatt taaattttat atcgctttag cagtatttgg aattactctt
    14101 gtattatttg tattttttat tttattaaca ctaaaaaaag tcatcatgcc aattcatact
    14161 ttagaaaaac taagcgctaa tttagctagc aaagaagcca atctacactc tcgtttaaat
    14221 atagatccaa aaagtgagct tggacaaagt gctcaatata ttaattcatt tatttccacc
    14281 gttcaaaact caatcataga agccatagaa aatgctaaat caagtcatca aaattcacaa
    14341 aaactcaaaa acaactctat gatgcttgaa aacagctcta attcgcaaca tgaacaaatt
    14401 caaggagtta aagaaatcac tcatgtttta gatgatcata tcaatcttgc gggaaattta
    14461 gcacaagaaa gtatagaaaa tatgcaagat atgcacatac taatggataa agtagaactt
    14521 actctatctg aacttgtaaa tttaataaat gaaaacaatg aaaaagaaca aaatatagta
    14581 gccaatatgg acaatctaac ccaaagtgcg gataatatta tagaaatcac aaactccatt
    14641 aaagacatag ctgatcaaac taatttactt gccctaaatg cagctatcga agctgcaaga
    14701 gcaggcgaac atgggcgtgg atttgctgtt gtagccgatg aagttggaca gcttgctgat
    14761 aaaacaagta aatctctttt aaacatcaat gctactgtta atactatagt ccaacaaatc
    14821 aatgacaaca aagccttaat ggatcttatc catgattcta tgaaagaaac ctcttcaaaa
    14881 accaatgatt tacaacaaga acttgtaaat tctatgcata aattggaaag ctctatagaa
    14941 tcaacccaaa ccatgaaaga taaaagcatg gaagtaaaag ataaaatgct tatcttagga
    15001 acaaatatag ataaagttaa cgaacttgca aattctgtta aagatttatc atgtgaaatc
    15061 aataatatct ctcaaaatgt tctaaatggt gcctctaaac tctccgaaaa attaagtagc
    15121 tttcagtaac ttttttcacg ttaatttaac ttaacgtgaa atttcaataa aaattttatt
    15181 tttaatttat gtttttcaag taaaattagc agtttttatt tcaaaggaga tactatggag
    15241 tttcttgaac ttttattagt tttaatcgcc ttgatactga ttatcaaaaa accagaaaaa
    15301 gaaaatttgg cttttggttt ggtaatggta gcttggcttt taatggtttt tttctatgtt
    15361 ggccacaaaa caggcgcact attaacaata atgaatctgt aaggaagggc taaatgaacg
    15421 aaatcaataa aacaaaaaat ttctacacac taatgtgttt agcaggcttt ttgattatac
    15481 tcttgcctgt aggtattgca aatttgatat ttggttatat gttgggcgat agtccttgca
    15541 cgctttgctg gggacaaaga gaagcaatga tctttatcgg tgtaatggcg cttttcattg
    15601 ttcgttatgg tatgaaaggt aaataccttg ctgctctttt aatcatgaca gcagtagggc
    15661 tttatcaatc ttttgctcac tatggtaatc acgctcatag agatttagat caaggttttg
    15721 gtttagcagt ttttggtatc catacttatt tttgggctga agtagtattt tgggctgttg
    15781 tattgctctt aggtgtgatt tttgcttttg ctcctaaatt taatgctttt gaagctgaac
    15841 taaatggaga aaagtttaga aaatatacta aatttagctt tgcagcagtt ttaatcagtg
    15901 ctatcatcgt agcatcaaat gttttccaag cctttattag cacaggtatt cctccttatg
    15961 taggacaagg cgatcctgta agatttagtt taaatccaaa atacatcatt tggagtaaag
    16021 aaggttggaa tggtttatgg caaaatattt ctttcttagg aaaacgcgat gttaaagctc
    16081 ctgattatgc ttttgcacct gcaagtgaaa aacttggcat aaaatttgat aatgatatca
    16141 acaatgctcc atttgcaaaa atcaatgatg agcttaaaat cacaaatgaa caaaccataa
    16201 attttgacaa agccatcaat actcttgatt atatcaataa cgaatttgta gcaagttcta
    16261 aatgggatgt agctttctta gataataatt ttagcgttaa agaaggtttt gaacttgatc
    16321 cttatttttc agcttctatc gatccaatca tcggtatcat accttatatg aacgataaat
    16381 tcattcttat gggctcaaac aaatctttct taagatttgc aaaaaatcct aatgcaagtg
    16441 aagaagatat cgctaaacaa tacgctgact ttgtaaaagg caatgataaa tttaaaggtc
    16501 aaggcgaaag tttaggtcgc ggaagacttg ataccgtaag agcaaaattt aaccatgtag
    16561 caagtatgac tacagatgga aattatcttt atcttgcaac tgttccaaac aacaaagacg
    16621 ctaaaacttt tgtaatctct aaagtttctt taaaagatcg tgttctttca ggagaattta
    16681 ctccaaaagc aaatcttaaa gaaggtaaaa ctttaggcga tctttatgta acttctatga
    16741 cttttaaaga tggggaaatt tatgcactta gcaaaaatca caatgtgatt gccgtaattg
    16801 atccagtcaa agaagaagta gtgaaaacta tcgctttccc aagctctatc actaatgcta
    16861 gaagcatttt ctttaaagat ggaaaaatca atattctttc ttatcaagat ggagcaaaca
    16921 agctttatac tttaaactaa gctttaagtc ctagtgaaaa ctaggactta tatttaatct
    16981 tatctttaaa tcctgctttt tcaaaacctc ttaaacgaag caaacaacta tcgcactccc
    17041 cacaagcttc atcttcactc tcataacaag accaagtaag ttctaaaggt acattttctt
    17101 ttaaggctag ttctacaatt ttagctttgt ttagtctaac aagcggagtt tttatacaaa
    17161 ctttgaaatt cttactcgta ccttcattga taaattcttg tgccttttgt ataaactcat
    17221 cagtacagtc aggataacca ctgccatctt cttctaccac ccctataaaa atactctcac
    17281 aattttcctt ttcagccaaa gatcctgcta tacttaagaa aattccattg cgaaaaggca
    17341 cataagtgat aggtggagta tcgcttgtac aaagctcatt tttagggatg tctatacttt
    17401 tatcggttaa ggcattgccc cctatatctt tgataaaact cacatctaaa atataagatt
    17461 tttctacttt taaagccttg caaatttgct taaaacattc tttttctttt tcttgagtgc
    17521 gttgttcata gtcaaaatgc aaagcgatga tttcataacc ttcttttttg gccagataag
    17581 cacacaaagt actatccata ccgccactta tgatacaaag tgctttttta ctcattttta
    17641 tccttaaatt tgctataatt tcacaatttt aacgaaaatt tttaaattta aattgcaaaa
    17701 aggcaaaagc atgataaaca taaaactcat agaacacatt tttaaagccg cttctatcag
    17761 tcgttggaat gattatccaa gaatggcaaa tttggttgaa cttgacaaac aagctcataa
    17821 attcatcatc gcatatttta tcgctaaaat ggaaaaagat gtggatatga gagtgattat
    17881 agaaggggga atttttgagt ttttaagtcg tgttgtggta actgatatac gccctgatgt
    17941 gtatcatgaa atcgtgcgtc aaaaaaaagc tgaagttaat gcttgggttt taagcaaaat
    18001 cgaacctatg atagaagata tagaagatgg ggaatttcta aagcgttttg aagcgtattt
    18061 aaatggtaat gcttatgcta aagaaagact tatcttaaaa gcagcttcat attttgctac
    18121 aagatgggaa tttaacatag tttatcaaac ctcagctttt ttaaatgata ttgatgagat
    18181 taaaaacaaa gttgaagaag aattagaaga ttactatgag cttataggag ctagaaaaat
    18241 cgctttaaat caaaaaatag ccaaaattat tgatcttagc ggaagacttc gctttcaaaa
    18301 acgttgggct caaactccac gcataccaga aaccgcggtt ttaggacata tgcttgtggt
    18361 ggcgatttta ggatattttt actcactaaa aatcaaggct tgcgataaaa gacttgagaa
    18421 taatttttat tgtgctttgt ttcatgattt gccagagtct ttaacacgtg atattatcag
    18481 ccctgtaaaa tacggcattg atggacttca tgatatcata aatgattatg aaatgaaact
    18541 tattaatgaa agaattttac cctttgtacc tgagggttta aggggtgagt tttcttatat
    18601 tttaggcatt agagaaggta gaaacggtga gtcaaatttt gtaaaaaatg agtttgaaaa
    18661 tcgcacttat aaaaatgcta aaatcgagct ttgcagcgga agtttaagct cttttaatga
    18721 aaatgaattt ggtgctatag atggtaaggc gcttaaatac tgcgataaaa ttgctgctta
    18781 tatagaagca ggacttagta taagttatgg tgtaaagtct aaagaacttg aaagtggttt
    18841 tttaggaatg catgagtttt ttaaagaaaa tcctaccata gatggggtga atttttttga
    18901 aatttgtgaa agtttaagag agtattttaa aatttaaata agatttttat actactattt
    18961 tcaatatgtt ttaaataaaa atattataaa ttcaaatttt attttgtata aaatataaag
    19021 gagttattat gaaaaaatac tttcaaaagc gctatacttt agcctttttt ataggtatat
    19081 tagcgggtat tttcggagct attgttaaat ggggttggga agtacctttt cctccaagaa
    19141 atcccaatgt tttttggcca gcagatgctt tagaacgtgt tactccacct aaaatttttc
    19201 tagaacaact aggcttacct actgattgga tttatatgtt ttcaggtatg caaatgcctt
    19261 tgtcaatttt tatagtacat gtcggttttt ctattatttt tggagtggct tattgtatga
    19321 tagcggaaaa atggcaccgt attactatgt ggcaaggtgc agtttttgga ttttttgttt
    19381 atctttttgc ccatgttatt gtaatgcctt taattgcaga agttccacca ctttctgaaa
    19441 ttccttttga tgaacacctg tctgaaattt ttggccatat tgtttggctg tggggcatgg
    19501 aaatagttcg tagagatata agaaatcgta taaccaaaga aatagaagaa tgaaaggaaa
    19561 cctttcattc catatctaaa accgcacctt tactagcatt gctaacaagt ttttgataca
    19621 ttctaagcca tcttgaagac acctcttttt gaggcaatgc aaattctttt ttacgtttag
    19681 caatttcttc ttcacttaca tttgcatgga tagtataagc atctacatca atttctattt
    19741 catctccatc ttttaaaagt cctataagac caccttcagc tgcttcaggg gaaatatgac
    19801 caacgcttaa accccttgta gccccgctaa aacgaccatc ggtgattaaa gccacatcag
    19861 cacctaaacc catacccatt aaaagtgaag taggacttaa catttcttgc ataccaggac
    19921 ccccttttgg accttcatag cgtattacac aaacatttcc tttttgcacc ttgcctttga
    19981 taatgccttt tatagcttca tcttgagagt taaaacaaac agctttgcct ttaaattttc
    20041 tttctccgat tattcctgcg gtttttataa cgcaaccttg ctcggctaaa tttccaaaca
    20101 aaatggcaag cccacctact tttgagtaag cattatctac tttacgaatg atattttcat
    20161 ctttgatttt ggcatttttt aagcgttctt tgagactttc tcctgtaatg gtcagtgcat
    20221 caagttctaa aatatgtcct tgtctgcttg aaatttcagc cataactgca ctcacaccgc
    20281 ctgctttgtg gatatcatcc atataaacac tatttagcga tggggctatt tttgctatgt
    20341 gtgcaacttt gcttgagatg aaatttaaat ctttaatgtc tagtgctacc cctgcttcac
    20401 gcgaaatggc aagcatgtgt aaaactgtat tgctacttcc acccattgcc atatctacta
    20461 ccatagcatt acgcacagct ttttgagtga tgatattgcg aattttaaaa cgttcatcta
    20521 gggcgatttc acaaatacga cgcgctgctt ttcttaaaag ctcttctctt tctttgctta
    20581 aagctaagat ggttccatta ccttctagtg ctatacccat agcttcgcat aaggtattca
    20641 tagaatttgc tgtaaacatt cccgagcaag atccaccact tggacaggct gaacattcta
    20701 tatctttaaa ttcttcttcg ctaatttttt tggcttcata agcccctaca gcttcaaaaa
    20761 cagagctaag actaatcttt tctccttttt tagttacccc tgaagccata ggcccaccac
    20821 ttacaaaaat ggttggaaca tttactctta aagctcccat taacatacca ggagtgattt
    20881 tatcgcagtt tggaacacag attaaagcat caagttgatg agcattcatc actgtttcaa
    20941 tggaatttgc gatgatttca cgacttggta aagaataaag cataccttca tgtcccatag
    21001 ctataccatc atctacacct atggtattaa actcaaaagg cacacaacca tttttgcata
    21061 tctcatcttt aatgatttta gcataattat ttaaaaaata atgtcctggg attatatcta
    21121 tatagctatt tgctacacct ataaaaggtt tgtcaaaatc ttcatctttc aaaccacaag
    21181 cacgaagtaa agaacgatta ggtgctttta aatgtccttt ttttatcgca tcgcttctca
    21241 ttgtaactcc tgataataat tttttaaaat tatatttagc aaagcttaat ttttgtgaaa
    21301 tttattttga tatacatttt cataaatgat aaaaattatt aattgacaaa aatatttttt
    21361 tataatacaa tgctttttga taatcaaaaa aggagtcaaa atgagacaat atgaaaccta
    21421 taaatgccaa aaatgtggta atgaagtaga agttcaaaat gtaggtggag gtaagcttag
    21481 ttgttgtggt gaagaaatga aatgtatcac tacagattta actgcagtaa atttgatgaa
    21541 agcttttgcg ggcgaatcta tggcgagaaa caaatacgat ttatttgctg atgtagctga
    21601 agaagaaggt tggcatgcgg ttgctagaca ttttagagaa gcagctgaaa atgaaaaatg
    21661 gcatgcaaga gcagaattta aagcttatca tgaaatcgtt gatggaaaac ctttagaagt
    21721 aactacaaaa aacctagtaa gtgctgcaga aggtgaaaac tatgagcaca caactatgta
    21781 tccaaatttt gcaaaaattg ctgaagatga aggtaaaaag gctatagcaa gattatttac
    21841 agctattggt aaagtagaaa tcgaacacga aagagaatat ctagcgctta aaaaaatgct
    21901 cgaagaagaa gaatttttta atagtgaagt agaagaatta tgggtttgtg aagtatgcgg
    21961 acatatacat cgtggcaaaa aagctccagc agcctgtcct ttatgtaaag caccaaaaga
    22021 gtattttaaa cgcgaatttt tgggttaagt taagaaattc ttatcctttt taagataata
    22081 ttataattat tttttaataa aaggataaga aaatgaaaaa attactattt ttattttttg
    22141 ctttaacggc ttttctcttt ggtgctgtaa atatcaacac tgcaacacta aaagaattaa
    22201 aaagtttaaa tggtattggc gaagctaagg ctaaagcgat tttagaatac cgcaaagaag
    22261 caaattttac aagtattgat gatcttaaaa aagttaaagg cataggtgat aagctttttg
    22321 aaaaaatcaa aaatgatatc acaatagaat aaaagggcat ttttgccctt ctttttagaa
    22381 aaatttgaaa actttatttg acacaaaaga acttttaaac gaatttgata taaatttaat
    22441 cggtattgat gaagcaggac gcggtgcttt agcaggtcct atgatgatgg cagcttgcaa
    22501 actgaacaaa caacttgatg ggttgtgtga ttctaaaaaa ctaagcgaaa aaaaacgcga
    22561 agaactttat gaaatcatca tcaaaaattc aaactatctc atacttgctt tttcttcaga
    22621 acaaatcgac gcactaggct taagcacttg tttaaaaaaa ggcttaaaac ttataaaaaa
    22681 gcattttaaa acagaaaata acttcttata tgatggaaac accaacctag gtataaacgg
    22741 gataaaaaca caaatcaaag ccgatgctag cattttgcaa gtaagtgcag ctagcatact
    22801 cgcaaaagtt agtaaagata gggtgatgaa tttcttagct aaagactttc cttgttatga
    22861 atttgaaaaa aacaaagcct atggcacaaa agctcataaa gaatttatag ctaaatttgg
    22921 aatttgcaaa ctccaccgaa aaagttttaa acttttatga ttattttgct aaattttgat
    22981 gcaaactcaa agcacattct ataccatctt ttatagccca aacaactaaa gattgtcctt
    23041 ttctagcatc tccacaagca aagatttttt tatgagtggt ttggaaattt tctgtgctta
    23101 tgttgttttt ctcatctaat ttcactccaa aatttttagc gatagcttct tcgcacccgc
    23161 taaaacccat agctaaaagc actaaatccg ctttataagt ttttttagaa tttgaaattt
    23221 caacatttat agctttgcct tctttaaact cgcgttttaa atcatttgct tcaacacatt
    23281 ctacatgagt ttttcctaaa aatttctttg tcattttttg atattcccta ggatctttgc
    23341 catatacagc aatggcttct tctaaaccat aatcagtagt aaaaatgtca gcttttaaag
    23401 gccaaggatt gttttggctt ctttgcaaag gtctttttgg acttctttca aaacgcacta
    23461 tagatttagc cccttgtctt gtcgccacag caatacaatc cacacttgta tccccgcttc
    23521 ctataaccaa gacattttta cctttggccg tatctgcacc cttgcctgtt tttaacaaag
    23581 ttttggtatt ttgcgttaaa aaatcaaggg caaattcaac cccttttagc tttctacctt
    23641 ctatatcaag atctataggc ttacttgctc ctgtacaaag caccaaagca tcaaattctt
    23701 ttagaagttt tgaaacctta tctttgctgt ctatattttc attcacttta aactcaatcc
    23761 catttttttt aagcaaatcc acccgtcttt gaactatact tttatcaagc ttcatatcag
    23821 ggataccata catcaaaagt ccgcctattt tatcacttct ttcaaaaaca cttactttat
    23881 aacctagtga atttaaagta ttagcacaag caagaccagc aggcccactt cctatgacag
    23941 cgattttttt gccattgtat tgcttaggtt tatttactct tactaaattt tctttaaaag
    24001 cattttctat aatggataat tcattatttt tgatactcac acttgtgcca tttatcgcac
    24061 acacacaaga atcctcacaa ggagcagggc aaacacgacc ggtaaattca ggaaaaggat
    24121 tggtaagatc aagtctttca taagcttctt tccataaaga acgataaata agatcgttcc
    24181 attcaggaat gagattgttt aaaggacagc ccacatcttt tccttcgctc atcacacccg
    24241 tatgacaaaa ggctacacca caatccatac atcgtccgcc ctgaatttct tgttcttttt
    24301 tatccaaagg tatagtaaat tctttgtaat ttaaaaccct ttccttagga gcaatttttt
    24361 taaaatccat tcttttaaaa tctaaaaaac ctcttgcatt tcccattttt actccttatt
    24421 tttgtgtgat tttcaaaaat gctgctaaat ttggatcttt ttcattttta caaagatcaa
    24481 gcatttttaa catcttttca taatctcttg gcatgacttt aaaaaagtct tttttatcga
    24541 atttttctaa aatatcttta gcctttttag aatctgtata agtgatatgt ttttctatca
    24601 cagcttttaa ttctttttca tccttagcat taagatcttt aatatccaca agctcggtat
    24661 ttacatgagc ttcattgtgt cttccaaaga tataaacaac gcccccactc ataccagcag
    24721 cgaaattcgc acccacatct ccaagaacta caacttgtcc acctgtcata tattcacaac
    24781 catgcacgcc tgttcctaaa accacagcca aagcccctga atttcttaca caaaatcttt
    24841 cccctgctat accatctaaa tacacttcac cttttgtagc tccgtataaa caagcatttc
    24901 ctgcgatgat attttcttca ggtgaaaaag tggcttcatt tgaaattttt gctatgattt
    24961 taccaccact taaacccttg cctaaataat cattgctatc gcctacaatc tcaagtttaa
    25021 taccctttaa caaaaacgct ccaaagctat tgcctgcatt gcctatagct ttgatatgga
    25081 tactatcttc atctaaagca tcttttccat aagtttttaa aatttcgctt gaaagcatag
    25141 ttgcaaaagt acgactttga tttcctactt ctaaagaaag tttgataggc tcttttttct
    25201 ccacagcatt tttacaaagt ggtagtaaaa ttctataatc aatcgttttt tcaagtttat
    25261 tgtctttata atctttaaaa tgcacagcgg ttctattata agtaggcaag gattttaaaa
    25321 ttttatctaa atttagcttt cctgctttac cttgcacact tttttggcgg agtttatcca
    25381 cgcgacctat catatcatct aggcgttcaa aaccaagcct tgccatgtat tctctaagct
    25441 cctcagctat aaaatacatg aaattaatca catcatctac tttgcctttg aaacgatctc
    25501 taagttctgt atcttgagtg gctataccaa aaggacaggt atttagatga caaactctca
    25561 tcattgtaca acctaaaaca atcaaaggcg cggttgcaaa accaaattct tcagctccta
    25621 aaagtgctgc tatggctaaa tcacgcccat tcataagctt tccatcagtt tctaatctta
    25681 ccctatctct aagcttattt aagatcaaag tttgatgcgt ttcagctaag cctaactccc
    25741 aaggaattcc agcatgcggt atagaagttc taggacttgc acccgtacct ccatcataac
    25801 ctgaaacaag gattaaattc gcgcctgcct tagccacacc tgcagcaacc gttcctatgc
    25861 cattttcgct tacaagtttt actgaaattt tagcgtcttt gttcgcatgt tttaaatcat
    25921 aaatgagttg agccaaatcc tcaatagaat aaatatcatg atgaggaggt ggggaaataa
    25981 gcgtcacacc tgcagtagaa tgtctagcct tagctatcca aggatagact ttaaagccca
    26041 ttaattgtcc gccctcacct ggttttgcac cttgagcgac tttgatttga atttcttttg
    26101 catgacttaa gtagtttaaa tccacgccaa aacgcccact tgctacttgc ttaatggctg
    26161 agtttttatc cacaccctct ttgatttcat agcgttcttc atcctcgcca ccttcacctg
    26221 aatttgattt agcacctatt ttattcatag cctgtgctaa acactcgtgt gcttctttag
    26281 aaatagaacc ataactcatc gctcctgttc taaagcgttt aactatactt tctacacttt
    26341 caaccttatc tatactgata gcttcactaa aatcaaattc catcaaagaa cgcaaattaa
    26401 cttgtttttc atctactaaa gccgagtatt ttttaaagct tttatagtct ttgttgcgac
    26461 aggcttgctg aagattaaaa atcacaagtg gatcgattaa atgttcttct ttagcacttc
    26521 taaaaccatg aattccttta gaatctaaag ccttatgcgt atcgttaaaa gcatgtttat
    26581 gtaaagcaat gagctctttt tcaaaatctt ctaaatccat accttcaatg cgtgaagttg
    26641 tagaagtgaa gtatttatca atcactttag agcttaagcc cagacattca aaaagtgcag
    26701 agccattata actttgcaag gtagaaactc ccattttaga agcaattttg actatgccac
    26761 ttgaacttgc cttgatgaaa ttttctaccg ccttttcata acttaaattt aaatctttat
    26821 tgacaatgag tttttgtatg ctctcataaa ccaaataagg attaataaca gtcgcaccat
    26881 aacctaaaag acatgcaaaa tgatgaattt ctctaggttc accactttcg ataataagac
    26941 ttgtgtgtgt tcttaaattt tttcttacta gatgattatg cactccagaa acagcaagca
    27001 aagcggggat ataagcgttt ttttcatcca ctcctttatc gcttaaaatg ataatagaaa
    27061 cacctttttt aacctcatct tctatcttaa cgcaaagctc atctaaagcc ttttctaaag
    27121 tttttttaga ataatcataa agtatagaaa attctttaac ttgaaattta tttaaagcct
    27181 taacttcaaa aagttcttca ttgcttatca caggcaaggc tatttttacg cgttttgcat
    27241 tgttttcatc aggttttaat aaattgcctt cgcttcctag ataaatcctt gtagaagtaa
    27301 caatctcttc tcttatggca tcaagaggag gattagttac ttgtgcaaaa agttgtttaa
    27361 aataattata caaaggttga taagttttag aaagtatagc caaaggagta tctacaccca
    27421 tagctgctat agcttcttta ccattttgag ccatagcagc cacactcatt ttaagctcat
    27481 cataactcca accaaaagct ttttggagtt ttaaaacctc atcttctttt aaaaactgat
    27541 gtttataaac tccgcttttt tgtttttcaa gttcaactaa atttttaagc cattttttat
    27601 aaggcttagc attagcataa tgctctttga tttcattatc agctataacc ctacctcttg
    27661 ctgtatcaac aagtaaaagt tttccaggtt ctaagcgttt tttggctttg atattttttt
    27721 catcaagttt taaagcccct gtttcacttg aaagtatgag catatcatct tttgtaagat
    27781 aataccttga aggacgaaaa ccatttctat ccaaactcgc ccccataatc actccatcag
    27841 taaaaactat agcagcaggc ccatcccaag gctccatcaa taaagaatga tattcataaa
    27901 aagcacgctt tttgctttcc atattttcat ttttatgcca aggttctggc accatcatca
    27961 taaaagcttc ttctaaagta cgaccattta gagctaaaaa ttctaaagta ttatcaaaca
    28021 ttgcagaatc actgctaggc ttagctatga taggaaaaat ttcatctaaa ttttcaaaat
    28081 actcactttg catcaagcct tctctagctc ttatgctatc aacatttccg cgtatggtat
    28141 taatctctcc attatgcacc atataacggt ttggatgggc tctttcccaa cttgggaagg
    28201 tattagtcga aaagcgagaa tgcaccaaag cgatggctga tttcatattg acatctttaa
    28261 aatcaagata aaaatcgctc aattgagttg aaagaagcat tcctttataa actatggtgc
    28321 gtgaagaaaa acttgaaaaa taaaattttg gcacattaat agctcttttt tctataaggc
    28381 gacgcgtact ataaagcact ctttcaaact caagtcctgc acttatttta cttggttttt
    28441 tcacaaaggc ttgtaaaaaa taaggcatag cttttaaagc acttgcacct atatcgctag
    28501 gattaaaagg cacttctcta aaacctaaaa attcaagttt tttatccttt aaaccttgta
    28561 aaaatatctc ttttgcttct tcttttgcat cagtattggg tgataaaaac atctgtgcta
    28621 cggcataatc acccttttta ggaagttcaa aacccaattc ttgagtttta aaaaaatcat
    28681 gtggaatttg gatcaaaatc cccgccccat cacctgaatt ttcttcagct cctgcaccac
    28741 ctcggtgctc aagattcatc aaaatttcta aagcatcaca aataacctta taagaagcaa
    28801 taccgcgtat attagcaact gcagcgatac cacaggcatc gtgttcgttc tttgggtgat
    28861 ataaacctat gctttgatta ttttctagga tattttctaa atccattttg ctctccttat
    28921 aagactgatt taaattttgt tagctttata aggattatag catacatttt tttaaaatcg
    28981 atataatttt tatcttaaaa ataaataaat taaaaaatat tttgatagat ttgtaaaaat
    29041 tataaaaaca tggcgataat actacctaaa atcaataatg ggccattata aaaaataaaa
    29101 gttggtatgc aagtatcttt aatgtgatcg tgttgtttat cagcatttaa tcctacagta
    29161 gttcccatgg ttgtttcact ggctggactt cctgcatctc ctaaagctcc tgctactcct
    29221 aagataaata taataagtgc tgtactaaaa ccaagttcca aacaaatagg acaaaaaagc
    29281 gtagctatga taggtatagt tccaaaagaa gtacctatac ccatagtgat gataagtcct
    29341 attaaaagca tgaaaaatac tgctaaaaat ttactttgct ccatccaagg aacgactgaa
    29401 tttacaagat ctactactga tccactttct tttaaaactt ctccatatcc tgcagcaaca
    29461 agtataacaa aagctataaa acccatcatt ttaagcccat catcaaaaac ttcattgact
    29521 tttgaaaatt caactccacc caaaataacc attaaaacaa aacccaaaag ccctgataaa
    29581 ggtaaattca tagtcaaaat ttgcaaaatt aaagttaaaa caagcccagc taaaacaccc
    29641 cattctttac gcgtcatttc aagattttct aaatccactt tagcaatttc tacttcttga
    29701 tactctcttg acttacgata aaacacaaaa agcgctagaa aaagtcctgc tatcatacaa
    29761 atagcagcga aatacatagt atttgtaaca tcatttaaag atacacttac attatttgca
    29821 tttaaattat cttttaaaag atcttgaaaa gtaagtccaa agcctactgg caaaaccata
    29881 taaggcgtag taagtccaaa agttaaagca caagcaaccg ctctacgatc gattttaagt
    29941 ttattaaaaa gacttaaaag aggtggaatc aacaaaggta taaaagccac atgaatagga
    30001 attaaatttt gagaaaaaca agaaatcaaa gctatagaca aaagcaataa atatttttta
    30061 tgagatataa aatgacttac tatcttaatc aaatatgcag ttaaatttgt ctttgaaatc
    30121 gctgcggcaa tggcccctaa aagtatatag ctaagagctg tttttaaatt ttctttcatt
    30181 ccgcttataa gtatattcat agtatctacg agttcaagat gagaaaatac acctgcaaca
    30241 agagctgaga tcaaaagact caaaagtaca ttaaaacgaa acaaacaaag taaagtcatc
    30301 aaaacaacac tgataatgat aggattagta agtaaagtca aaattattcc ttaaataatt
    30361 ttaaaaattt aattgtagaa aaaacttagt taaaatgtaa taaaactcga acatataatg
    30421 attttatttt aatatgcaaa attataaaaa taattatt
//
LOCUS       DARATF010000005        29637 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.005, whole genome shotgun sequence.
ACCESSION   DARATF010000005 DARATF010000000
VERSION     DARATF010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29637
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.005"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1127)
                     /locus_tag="SB502_000182"
     CDS             complement(<1..1127)
                     /locus_tag="SB502_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HEG0433679.1"
                     /translation="MKSARKNKNITIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLILDEKVVGHIDFKSQFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIEKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDVNGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFMRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKL"
     gene            complement(1105..1992)
                     /locus_tag="SB502_000183"
     CDS             complement(1105..1992)
                     /locus_tag="SB502_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEG0433680.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     ILLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKATEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNINSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            complement(1989..3104)
                     /locus_tag="SB502_000184"
     CDS             complement(1989..3104)
                     /locus_tag="SB502_000184"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEG0433681.1"
                     /translation="MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSNVNLKYFDWTRL"
     gene            3227..4333
                     /locus_tag="SB502_000185"
     CDS             3227..4333
                     /locus_tag="SB502_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEG0433682.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNIIEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSRRYLMA
                     AEKIWSFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            4359..5519
                     /locus_tag="SB502_000186"
     CDS             4359..5519
                     /locus_tag="SB502_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HEG0433683.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     DGHQNIDLLKIIKDKFKDDEFSFVCLFEDKEPLSVESIYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(5544..6167)
                     /locus_tag="SB502_000187"
     CDS             complement(5544..6167)
                     /locus_tag="SB502_000187"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HEG0433684.1"
                     /translation="MQNFKELNEKIAWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIIDLSLDCDNDTLLILANPVGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINARKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKKELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(6169..6936)
                     /gene="hisF"
                     /locus_tag="SB502_000188"
     CDS             complement(6169..6936)
                     /gene="hisF"
                     /locus_tag="SB502_000188"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEG0433685.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINISFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKKVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKMEHFLEA
                     FKLGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            complement(6937..7875)
                     /locus_tag="SB502_000189"
     CDS             complement(6937..7875)
                     /locus_tag="SB502_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
                     /protein_id="HEG0433686.1"
                     /translation="MSGKLTYKELIIEVLKQTKKPLNVSEIWQKALEKGLDKKLSSIG
                     QTPTQTIWNRLLTDKINFLKTSIKPTTFWLKERENELLKLDNKNEITNEKQEKNKFHE
                     RDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYDDYEKET
                     ITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQEIDSEVL
                     SELRRLNQSFGIGVIKLEKDISNSQILISAKEKELDIQTLNMLINKNPNFKEFIDDIN
                     KQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            complement(7860..8591)
                     /gene="hisA"
                     /locus_tag="SB502_000190"
     CDS             complement(7860..8591)
                     /gene="hisA"
                     /locus_tag="SB502_000190"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEG0433687.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKAEVRALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLEN"
     gene            complement(8588..9175)
                     /gene="hisH"
                     /locus_tag="SB502_000191"
     CDS             complement(8588..9175)
                     /gene="hisH"
                     /locus_tag="SB502_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEG0433688.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIQNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKTKEGFTFPHMGWNEVYSSHALFKGLEGAYFYFVHSYCVGLGKYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            complement(9172..10230)
                     /gene="hisB"
                     /locus_tag="SB502_000192"
     CDS             complement(9172..10230)
                     /gene="hisB"
                     /locus_tag="SB502_000192"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HEG0433689.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPTLLKLK
                     KFGFKFVMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVHGLKYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKVSIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            complement(10227..11513)
                     /gene="hisD"
                     /locus_tag="SB502_000193"
     CDS             complement(10227..11513)
                     /gene="hisD"
                     /locus_tag="SB502_000193"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEG0433690.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAISAKDEISKIVSSIIKEVQEKG
                     DEALIEQALKFDKAEISKIKITQEEITQASKHLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALAYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KASDEVQSQLELLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            complement(11521..12420)
                     /gene="hisG"
                     /locus_tag="SB502_000194"
     CDS             complement(11521..12420)
                     /gene="hisG"
                     /locus_tag="SB502_000194"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEG0433691.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            complement(12593..12946)
                     /gene="rplQ"
                     /locus_tag="SB502_000195"
     CDS             complement(12593..12946)
                     /gene="rplQ"
                     /locus_tag="SB502_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEG0433692.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
     gene            complement(12950..13963)
                     /locus_tag="SB502_000196"
     CDS             complement(12950..13963)
                     /locus_tag="SB502_000196"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEG0433693.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGESNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDTYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            complement(13976..14602)
                     /gene="rpsD"
                     /locus_tag="SB502_000197"
     CDS             complement(13976..14602)
                     /gene="rpsD"
                     /locus_tag="SB502_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEG0433694.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            complement(14630..15022)
                     /gene="rpsK"
                     /locus_tag="SB502_000198"
     CDS             complement(14630..15022)
                     /gene="rpsK"
                     /locus_tag="SB502_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEG0433695.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            complement(15032..15397)
                     /gene="rpsM"
                     /locus_tag="SB502_000199"
     CDS             complement(15032..15397)
                     /gene="rpsM"
                     /locus_tag="SB502_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEG0433696.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            complement(15400..15513)
                     /gene="rpmJ"
                     /locus_tag="SB502_000200"
     CDS             complement(15400..15513)
                     /gene="rpmJ"
                     /locus_tag="SB502_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEG0433697.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            complement(15685..15903)
                     /gene="infA"
                     /locus_tag="SB502_000201"
     CDS             complement(15685..15903)
                     /gene="infA"
                     /locus_tag="SB502_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEG0433698.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            complement(15991..16788)
                     /locus_tag="SB502_000202"
     CDS             complement(15991..16788)
                     /locus_tag="SB502_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0433699.1"
                     /translation="MFNFITTLLKTNLYFLEEKTTSKSSNQTHIISLKQSDDEFLNLL
                     FSFLVPQSDEDKNFIEKTRTKIKRNEHNIALIKNPNFNALIDTGFLDTIDTLKEKLHI
                     HKTDFKDITHIILTHAHPDHIGALMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTL
                     LKLKNIEFINHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIP
                     KPKIAIKFDIDQNEAIQTREKLLKEFKERKLKVIGTHVPFIEPKFLD"
     gene            16875..18170
                     /locus_tag="SB502_000203"
     CDS             16875..18170
                     /locus_tag="SB502_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0433700.1"
                     /translation="MRKSKFETKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMSEFWALLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPGYETLGFLAPVLLILIRIFQGIAIGGELPGAWVFVREYCQEKQKAFFLSCLNSAM
                     ALGILLGSIVFLIINAFFSIEEIAAYAWRIAFFVGGIFGIISIYLRRFLQETPVFKQM
                     KKESSLSSFPLKDLFKEKDIVKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQILGILGIALGGVFMGYLVDKFGLFKICIFFSLAFVFFSFLYFYALYELKNLV
                     LVCILYSIVCFLGGINVFAPILMSEVFRAKIRFSGISFSYNIAYAISGGITPQLVFWL
                     NTLASKNDNPFLYGMSIYMIFLALLAICAVFIVKDKIKF"
     gene            18220..19851
                     /locus_tag="SB502_000204"
     CDS             18220..19851
                     /locus_tag="SB502_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HEG0433701.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLVLVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKDKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(19871..20293)
                     /gene="cgb"
                     /locus_tag="SB502_000205"
     CDS             complement(19871..20293)
                     /gene="cgb"
                     /locus_tag="SB502_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HEG0433702.1"
                     /translation="MTKEQIQIIKDCVPILQKNGVDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRNFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAEFYINIEKKLYDK"
     gene            complement(20360..20818)
                     /locus_tag="SB502_000206"
     CDS             complement(20360..20818)
                     /locus_tag="SB502_000206"
                     /inference="COORDINATES: protein motif:HMM:NF014651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEG0433703.1"
                     /translation="MVFKNNSKLQYTALKLLSSSNEDDKLIASDFTSLFLSDVDYVKA
                     PPFASFYLDENKEIYSDNSDKIKQIFVQNNFFSFFNKEPADSLINELLFISFLIKKQD
                     DIILQKFLKEEFFTWFNMWSFDVINKAKTHFYKALTMLMQDFFNQLNTKF"
     gene            complement(20915..21286)
                     /locus_tag="SB502_000207"
     CDS             complement(20915..21286)
                     /locus_tag="SB502_000207"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433704.1"
                     /translation="MFIIVFFENSKHERKMSFFTGLIGIGLLNTAIVLQTLHVGQTWI
                     MGLVNPFELLGGTYDWFISLSFAFLGLGTVTWYLHNYLHEKFKSKFFAYFALLCAFLG
                     VFTTRMLFYGLISTQIMLGHS"
     gene            complement(21293..21622)
                     /locus_tag="SB502_000208"
     CDS             complement(21293..21622)
                     /locus_tag="SB502_000208"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433705.1"
                     /translation="MMVAFIPSFFHLNDITHIFNVLNRMGVFYANNEWHIGWMNNEIL
                     FVSLVCALGFLLYLKTSNWVFYLTLICGILGLFFMSGAYMAPCKKVCLLGILRSLCFI
                     FLLVLYF"
     gene            complement(21619..21783)
                     /locus_tag="SB502_000209"
     CDS             complement(21619..21783)
                     /locus_tag="SB502_000209"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433706.1"
                     /translation="MTSFNHILSEMPLVLFTILAQAVIGLSLVYAPAFINGYKNYANL
                     KSFGLALELQ"
     gene            complement(21770..22426)
                     /gene="dmsB"
                     /locus_tag="SB502_000210"
     CDS             complement(21770..22426)
                     /gene="dmsB"
                     /locus_tag="SB502_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HEG0433707.1"
                     /translation="MKLEENSQFGVMLDQSKCVGCRTCSLSCKDYKNMPVGVNFRRVF
                     ETEGGNWTCKEDGSFEQNVFAYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDS
                     MCIGCKACAMACPYGAPQFNHESGHMSKCDGCYERLKEGKNPICVDSCPFRTLKAGDI
                     TKLREEHGNLASITPLPDASITHPNLCIVPEKHSLPSGNKSAIFHLPQNYQGVKNDII
                     "
     gene            complement(22437..24758)
                     /locus_tag="SB502_000211"
                     /pseudo
     CDS             complement(22437..24758)
                     /locus_tag="SB502_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009883064.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            25094..26629
                     /locus_tag="SB502_000212"
     CDS             25094..26629
                     /locus_tag="SB502_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0433708.1"
                     /translation="MLRFLIFAMLLFVNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLTRFDEHMSLKPDLAASWNVSKDGLSYDIFLREDVLWHDGVKFSADDVK
                     FSLEAFKNPKNNSSIYVNFEDIKSIEILNPYHLKITLSKPFPAFLDALSIGMLPKHLL
                     SDKDLNTASFNQNPIGTGPYKFVKWKKGEYVEFKANENFYLTKVKTPRLIIKHIFDPS
                     VASVELKNGKIDAALIDVSLLNIFKKDENFKILRERSADYRALMFNLENEFLKDIQIR
                     KALNYAIDKQSIVKNLLHDYGFVANHPLERSWADSKAFKTYEYNPKKAQDLILALGFK
                     KNDEGIFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKARTLGHHGVGFTWNVYE
                     WSK"
     gene            26629..27573
                     /locus_tag="SB502_000213"
     CDS             26629..27573
                     /locus_tag="SB502_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0433709.1"
                     /translation="MLKRLVFSIVVAFFSTFLCFVLLHFSKGSIAYANGVNSQSKEFV
                     QRIEQNLGLDKPLLEQYKIWLFKALKGDLGVSFLSGESVLKLIKERIFNTFILGFSAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYEGLGSLLFKSIIFKDY
                     PVVLALIFFSVLLATFFTFLSDIVARILNPRLRRLDFV"
     gene            27560..28354
                     /locus_tag="SB502_000214"
     CDS             27560..28354
                     /locus_tag="SB502_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0433710.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLAPFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGVGGSLLSIIFALCYLFLARCFFYVFWMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKVVFIGAWWIILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            28351..29061
                     /locus_tag="SB502_000215"
     CDS             28351..29061
                     /locus_tag="SB502_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0433711.1"
                     /translation="MKVRNLNISLKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKERKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKKNASKIISILEELKNTTALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLDEFLRYYNA"
     gene            29054..>29637
                     /locus_tag="SB502_000216"
     CDS             29054..>29637
                     /locus_tag="SB502_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEG0433712.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNVNFSLNENDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIKNLIQDGLENFNLQKNDDLILEFFDFFSLKKQILKQKPYELSGGEATRVGLIR
                     ALVLNPKLLILDEITSALDIKTSKEILTFLYDYQ"
BASE COUNT         9274 a         4619 c         4536 g        11208 t
ORIGIN      
        1 agtttttgat aaaattcttc atcatttttg tattctaaaa ttccatcagt tggaaaaagc
       61 tcattataaa ttttttgcat attttttaat ctatttggaa aaagagaagt taaaataaca
      121 ctagatactt ccttgcgcat gaaaattgct ggaggaatga tacccgctct tagtaaatct
      181 tttaaagact gagaattata gtgcaaatgg tgatgacaac catgagggca agatcttgtg
      241 ctaacaatca tgcgacattg atcgcaaaat acaaattcag gcaaaacgat cacttctatg
      301 ccatagtcct tggaaaaatc atcaagtatg gtttttggtt ggttatcgtc ataaaacatt
      361 ccaagtcctg tatgattttg tcctactact agtttggtac aacctagact ttttgcgata
      421 atactttcta agccaggatt taaatgagcg tgaaaaatat taatattttt taatggaaaa
      481 atgaaaattc tatccggtgg aagatagttt tgaataaatt ttttcaaata tgcttcttta
      541 agttcgaatt caaacccatt tacatcaaaa gattctacaa gaaaaattac aactaaatct
      601 gctttatcaa tagtccaacg aaacattctt tcatgggcac gatgcaaagg atcaaaactt
      661 gaaactatag cagtaatttt ttgtgcatta agattgtttt tgatttgttg aaaattttct
      721 tttatttttt caatttgaga attataaatt tctatttttc cacttatgca agttgttccc
      781 atgtcttcta aagagcaagt gttaggactg aaaatatcag aaaaattttt attattttta
      841 aattggcttt taaaatctat atgtcctact actttttcat ctagtatgag atcgattcta
      901 tcgccagatt ttatatcatt tagtgcttct tcagcatttt ttggtgcaaa gcttaaggga
      961 tagggaaaac tttctccttt aaattttcct gatttaatga tttcattgac ttctttttca
     1021 ttcattaaat gagtgcaagt acctagcaaa ccttctttaa taagtgacaa gatgccaaat
     1081 tcattttgat ctatggtaat gtttttattt tttcttgctg atttcatatt tcttcctttt
     1141 ttcccataaa gatttacgtg aaatgcctaa tttttttgaa agatcagtat caggaaatat
     1201 attttggtaa tttataataa catattttac atactcatct atagttaaaa tttcattgct
     1261 attgatattt ttttcattat catttaaatt aatgcagttt atttttaaat catctgtatt
     1321 tgaattggta tgcaaaataa catttttgtt ttgtataaaa tctaggagtt tttccttttc
     1381 tgttgctttt aatgcttgaa aattactcaa aaataagaga ttgttttctg tgggaagttt
     1441 cataactttt tcaactgaat ttgtagatgt taaatcaata aaagaaagag taatgtcaca
     1501 ttcatttgca taattaaaaa caaaagcatc agcactgctt tgcttgttgg attttaatat
     1561 caatggaagt tttaattttt tataattata ctctggaatt ttgattgttt ctaatcttga
     1621 tttgatatag ctttgataag ctttattaag aattgaaagt tttctaaaat cctgataatg
     1681 ctttattttt ctaatcagct cttctatcat aaagggtttt tgaatataat cactagcacc
     1741 taatttcaaa ggatttgaaa ctgtatctgt acttatataa gaaataagca aaataataat
     1801 actatgttta aactgaccta cggcttttag aaaattatta gtatttgtag aaagcagtat
     1861 aatgtcatag tatttttcac cattgtattc atcaaacgag ttaataattt cacagctata
     1921 tccagcatca cttagtttaa tgctaatgct ttgcgctaga taaatttcat tttcaataat
     1981 taaaactttc ataatcttgt ccaatcaaaa tattttaaat ttacattact aagcaccgcc
     2041 ataccttctt ttcttccaat aaaacccaat ttttccgttg ttgtggcttt aacattgatt
     2101 ctaaattcat ctaaatctaa agtatgagct atattgcttt gcatagcttg tttaaagtct
     2161 ttaagtttag ggctttgtgc catgacgcaa atgtctatat taatgagttc aaaacctatt
     2221 tctctgactt tatcataagc ttgttttaaa agctccatgg agttggcatt tttaaatttc
     2281 atatcagtat caggataaag ctctcctata tctccaagtc ctgcagcacc taaaatcgca
     2341 tcggttaaag agtgagccaa aacatctcca tcgctgtgtg ctttaagccc catagtagga
     2401 tgaatttgca ctcctgctaa aagcaaaggg cgattctctc caaattcatg cacatcaaaa
     2461 ccattgccag taaaaatttc aaagctaggt gtaggcaaat caagtttttt aagatcttct
     2521 ttaaaggtta gttttcttgc attttcttca ccttcaacaa accaaatttt tccacccatt
     2581 gcagctatag ctgtgctatc atctgtaaat tctaggtttt gatccaaggc ttttttaagc
     2641 aatttggttt tagaaatttg cggggtttga atgagtttga ttttttctct ttgcaaggct
     2701 tcattgtcaa aaagtgttgt atctgcaact tttaaagcag gggtaataca atctgcttta
     2761 tctaaatttt caatcaaacg atcaaacaaa tttttactca ccaataccct tgctacatca
     2821 cttaccataa caaattcgct atctatgagc tctaaggctt tttttaagga ttctgctctg
     2881 gtatcaccac cttctatgaa ttcatagttt ttagtaaatt ttttcatata agtgatatta
     2941 ctagaggtaa caactatttt tttaaaagga taaaaagagc ttaaattttt tgttgcataa
     3001 agccaaagag ggtcatttcc aagtcgtaaa aattgttttt ttacctttgt attaaaacga
     3061 gtagaatttc cagctgctaa cataatgagg ctcatttcac tcattttttc attcctcttt
     3121 ttaatattgt tggtttttat aatgttacca tattatacac ttataaaaag ctaaatttta
     3181 tcattttatt agtaaaattg atttttttaa aagacaagga aaaaatatga aagaacaaat
     3241 tttagagaaa ttaaaaactg taaaatatcc tggttttgaa aaggatatag tgagttttaa
     3301 ctttgtaaaa gatattaaaa ttcaagatga tggtgtattc attgatatag aaatcgtttc
     3361 agcaaatcct gaagtagcta atgaaattcg taaaaatatt attgaagctt tatcgagttt
     3421 ggctttaaaa aatattgaac ttaatatcat tactccaaaa attcctgaag aaaaaagtaa
     3481 ttcaagaagt ggaaaaaata tcgctccaca agtaaaaaat ttcatcatgg tttcaagtgg
     3541 aaaaggtggt gtgggtaaat ctacaactac agtaaattta gcaatttcca tggctaaaat
     3601 gggaaaaaga gtaggtattt tagacgcgga tatttatggg ccaaatattc caagaatgct
     3661 aggtgaaacc aaaactcagc ctgaagtagt agggcagaga ttaaagccta ttttaactca
     3721 tggtgtttat atgatgagta tgggggtttt gatcgaagag ggtcaaggcc ttatgtggcg
     3781 tggagctatg attatgaaag caatcgagca acttttagct gatgtgattt ggcctgaact
     3841 tgatgtattg tttttagata tgcctccagg aacaggcgat gcacaaatta cttctgcgca
     3901 aagtattcct attactgcag gagtttgtgt aagcacgcct caaaccgtat ctttagacga
     3961 tagcaaaaga gctttagata tgtttaataa acttcatatt cctatagcgg gtgtgattga
     4021 aaatatgagt ggatttttat gtcctgataa tggtaaagag tatgatattt ttggtaaagg
     4081 aacagctgaa gatatggcaa aagcctataa aagtgaagtt ttagcacaaa ttcctataga
     4141 aatgatagta agagaaggtg gagatgaagg caagcctgtg agtttttatc accctgaaag
     4201 tgtgagttca aggcgttatt taatggcggc tgaaaaaatt tggagtttta tagaaaagat
     4261 taacaatgaa ggtggtgcgg ataattctgc tatacaacct gtgatgaatg gaaaaagtgc
     4321 gtgttcgcat taaaaattaa gtggataagg aaaagaaaat gattaatact aaagaagatt
     4381 ttttactttt aatcaaacaa atcgagcaaa aaagtggcta taaaaaacct aaagcttttg
     4441 gtatagcaag gcttgataga ggacagttaa ataaaaataa aatcttacaa gcaagttttg
     4501 ctttgattaa ctatgagcaa aattttggct cagcggcaat catgcttgaa gcttttatgc
     4561 aaaggggcgt ggagattgat tttaatgcga gtgagtttgt gcaaactttg aaattagaag
     4621 atattgattt tgcactttct tgttttaaac cttttttaga agaagatggg catcaaaata
     4681 ttgatttatt aaagattatc aaagataaat ttaaagacga tgaattttct tttgtttgtc
     4741 tttttgaaga taaagaacct ttaagtgtag aaagtattta tctaaaactt tatttgcttt
     4801 ctactaaaaa agtaccttta agaagtatca atttaaatgg agcttttgga cttttaagca
     4861 atgtagcttg gagtgatgat aagcctatcg agcttgagta tttaagagca aatgaaatgc
     4921 gtttaaaaat gagcaatcaa tatccaaaaa tcgattttgt tgataaattc ccaagatttt
     4981 tagcacatat tatccctgag gataatacaa gaattttaga aagttctaaa gtaagaatgg
     5041 gtgcgtcttt agcagcagga acaaccatca tgccaggggc aagttatgtg aattttaatg
     5101 caggtacaac aggagcttgt atggttgaag ggcgtattag ttcaagtgct atagtaggag
     5161 aaggttctga tgtaggtggc ggagcttcga ttttaggtgt tttaagtgga acaagtggca
     5221 atgctataag cgtaggcaag gcttgtcttt taggggctaa ttcagtgaca ggaattcctt
     5281 taggggataa ttgtatagtt gatgcaggta ttgcagtgct agaaggaacg aaatttttac
     5341 tcaaagatgc cgaagaactt gctaaactta atccttattt taattttgat aaagaaattt
     5401 acaaaggctt agagcttaaa ggtttaaatg ggctacattt ccgtcaagat tctataagtg
     5461 gtgctatgat agtagcttta aataaaaaag cagtcaaact taatgaagcc ttgcattgat
     5521 ataaatttat tttacataaa gctttaagct ttatgtcttt cttttaattt tgaaatcaca
     5581 tctgagaaac taagatttgc atctgcaagt aaaacactta aatgatacat taaatccgct
     5641 gcttcacaaa taagctcttt tttatctttt actgtcgctg ctaaagctgt ttctacgcct
     5701 tcttcaccaa ctttttgtgc gatgcgtttt gtaccacttt tgaaaagttt tgctgtataa
     5761 gaagtatttt catcggcatt tttgcgtgca ttaataagtt tttcaagtct ggctagaaaa
     5821 acaaaatctg catttttaga aattttttca aaacaagaaa tatcgcccgt atgacaagta
     5881 ggccctacag gatttgctaa aattaaaagc gtgtcattat cacaatctaa gcttaaatct
     5941 atgatattta agaaatttcc actttcttca cccttcatcc aaagacgctg ttttgtgcgt
     6001 gaaaaaaaga ctactttgcc actttctaag cttttttcta aggcttcatt attcataaag
     6061 cctagcatta aaacttcgca agtttttgca tcttggatga tgacaggtaa aagattatcc
     6121 actttttgcc aagcgatttt ttcattaagt tctttgaaat tttgcatatt atatccttat
     6181 acttaagcct tgatttttaa gataaatttt taattcttta atgtctataa gtttttgatg
     6241 aaaaacagaa gcagctaaag ccccatctat acctagttta aaagcttcta aaaaatgttc
     6301 catttttccc gctcccccac ttgcgatcaa aggtacttta caaattttat atacagcttc
     6361 taattgttct aaatcatagc catttttaac accatcttga ttcatcatat ttaaaacaat
     6421 ttcgcctgca cctagatctt gcactttttt aacccattct aaagtgcttt ttccactatg
     6481 tttacttgtt ttttcatccc ctgtgtattg aaatactttt aaatttccat tttcatcttt
     6541 aaaactatca atccctacta ctacgcattg cacgccaaag cttttagcaa ggcgtgtgat
     6601 taggcttgga tcatttaaag caggagaatt gatagaaatt ttatctgccc cattagccaa
     6661 aagttcagct gcatcttctt cgcttttaat accccctgca acacaaaaag aaatattgat
     6721 attttttgct acttcactta cccattctct tgatatgcgt tcttttctag cacttgcagc
     6781 aatatcataa aaaacaagct catcaatacc attttgagaa taatacctag caagctctat
     6841 gatatctccc atatctttat ggtttttaaa ttgtgttcct tttactactc tgccatcttt
     6901 gacatctaaa catgcaatta tgcgttttgt aagcatttat ttctccaaaa tacatttttc
     6961 tttaagatat ttttccattt cttcatcgct tttaatttca tcaaaattag cttgaatttt
     7021 tgcttctttg cccactttaa tttgtttgtt tatatcatca ataaattctt taaaatttgg
     7081 atttttattg atcagcatat ttagtgtttg aatatcaagt tctttttctt ttgcactaat
     7141 taaaatttga gaatttgaaa tatctttttc aagttttatc actcctatgc caaaactttg
     7201 atttaagcgt cttaactcac ttaaaacttc gctatcaatt tcttgtaaaa caaccaaata
     7261 gccttcattt gcccagctag aattgcttac agcttgaaaa tagcattctt ttaaatttga
     7321 aaaatttaaa gcaattttaa gttcaaaaga aaaaagctta taactatttt gtttgatatt
     7381 ttctaaaagt gttatggtct ctttttcata atcatcgtaa ggaaaataaa cccctacaat
     7441 atcaggataa ttccacttat cttccccgcc cttacccttt ttgctttgtt cgtgataaat
     7501 tgttttgcaa tttaaattaa aatctaaatt ttcatataaa aattttacaa gcaaggggtg
     7561 taaatctctt tcatgaaatt tatttttttc ttgtttttca ttggtaattt catttttatt
     7621 atcaagcttt aaaagttcat tttctctttc ttttagccaa aaagttgtag gttttattga
     7681 ggttttaaga aagttaattt tatctgtaag caacctattc caaattgttt gagtgggtgt
     7741 ttgtcctata ctagaaagct ttttatctaa gcctttttca agagcttttt gccaaatttc
     7801 actcacattt aaaggctttt tagtttgttt taaaacttct ataattaatt ctttataggt
     7861 caattttcca gacatcttat cccttcttct acactaaaaa ctccgtctaa taaagctttt
     7921 cctacgataa ccccactaca aattcctttt aagttttcaa ggtcttttaa gcttgctact
     7981 ccaccacttg cctgaatgca aatatgagga aaaatttcat ggataagttt ataaagtctt
     8041 gcatttactc cttgcatggt gccatctttt gaaatatctg tgcaaagtat gtgttttaag
     8101 cctttattgc tataaaaatc taaaacttcc ataagctttt tatcgcttgc ttcttgccaa
     8161 gcatttacag ccacaacata atcttctttt aaaatcgtat ctaaggctaa aactatagct
     8221 tcactaccaa attcttttaa aatttcaaga cataaagtcg catctttaat tgccatagat
     8281 cctataacta ctctttttac tccacaatca agcaaagctc taacttctgc tttagagcgt
     8341 atacctccac ctacttgcaa attgacactg acttctttgg ctaatttttc tatcaaagca
     8401 aattgtcttt tgctaggatc ttttgcacct gtaagatcta caagatgaag ttctttcgct
     8461 cctgcttttt cgtattcttt aaatttcttt aagggattgt atttatatac ttttttttgt
     8521 tcgtaatccc cttttacaag acgcaccact tcgccatcta taagatcgag tgcgggtatg
     8581 atttgagtca tcctatatcc ttaataaaat ttgaaattaa aatttcccca gcctcgctac
     8641 ttctttcagg gtgaaattgc actccgtaaa aattatcttt cattacgctt gcgctaaatt
     8701 tttgcgaata ctcacaatct gctatagtgt atttcccaag tcctacacaa taactatgca
     8761 caaaataaaa ataagcccct tctaagcctt taaacaaagc atgagagcta taaacttcat
     8821 tccatcccat atgtggaaaa gtaaagcctt ctttagtttt aaatttttga gttgtaaaat
     8881 ctatgagttt taaggtttct tgatttaatt cttcagaaaa atttcctaaa atttgcatac
     8941 ctaaacaaat accaagcaaa ggttttttgg tattttgaat aaaatcaata agattaaatt
     9001 gttctaaatt tttcattgct tcttttgcgg tacccactcc aggtaaaaaa agcttatccg
     9061 cactttcaag ttcttttaaa tccctactga tagttgcatt aaaacctaat ctatctagac
     9121 aaaatttcaa agatgctaaa ttcgcacagg ctgtatcgat gatgatgatt ttcatatcac
     9181 tcctttagag ctggctaaat tttcactttc tatttttact gccattttca aagcttttgc
     9241 aaaggcttta aaaagccctt cggctttatg atgatcgttt ttgcctttaa cttttaaatg
     9301 caaactcacg cccatagcat agcttaaaga ataaaaaaag tgctcgatca tttctgtgct
     9361 taaagcccct aaatgagatt ttttaaattt ggctttatag actaaatggg gacgattgca
     9421 aaaatccatc gcacaacttg ccaaacactc atccataggt aaagcaaaac catatcttgc
     9481 aatgccgatt ttatccccta aagctttttt gatacaagct ccaagtgcta aggctacatc
     9541 ttcaacgcta tgatgctcat cgatttccaa atctccttta caagaaattt caagccctat
     9601 acctccatgt acagcgattt gctctaacat gtgatcaaaa aaatcaatac ctgttttaat
     9661 gctaacctta cccccattta agcatacctt tacttttata tctgtttctt tagtagttct
     9721 ttgataactc gcgcttctaa aagaacttaa aatttcattt tctatttctt tccaagaaag
     9781 ttcgccgtat tttaaaccat gcacgcctaa atttgaagcc aagatcatat cactctcacg
     9841 atctcctata acaaaacttt gctccttatc ataaagttcg tgtttgatat actcttctaa
     9901 catagcggtt ttaggttttc tgcaagcaca attttcattt tcaaaatgcg gacaaataaa
     9961 aatatcttga aattctatac cgcaactttt taaaatatca agcatttttt catgagcgat
    10021 ttcaaaattt tcctttggaa aacttggtgt tccaagaccg tcttgattgc ttaccataac
    10081 aaatttaaat ccaaattttt ttagttttaa aagagtggga atagcatctt tttcaaaacg
    10141 caatttttca agagtatcga tttgaaaatc gctttttggc tcctctatta aagtgccatc
    10201 tctatctata aaaaggattt tttgactcat tttaagcttt ccaaacgaaa agttactgca
    10261 tttttgtgcg cgtctaaatg ctcattttgt gctaaaattt caacactttt acctaaagct
    10321 aaaaaacctt ctttacttaa ctcttgaacg gtcattcttt tgctaaaatc tgccaaacct
    10381 aaactagaat gcgttttagt aagtccataa gtaggtaaaa catgatttgt cccacttgca
    10441 taatcaccca tagactctgg ggaataagct cctaaaaata ctgatcctgc gtgttttaca
    10501 ccttttaaaa gttctcgtgg attttgagtt tgtatgatca aatgttcagg ggcgtaaaga
    10561 tttgaaattt ctaaggcttg atttaaatct ttagctatga taatgcgtga attagcaatg
    10621 cttttgcttg caagttcttt gcgaggcaaa agttctaatt gactttggac ttcatcactt
    10681 gcttttttag caaaatcttg acttaaacac actaaaatca cttgagaatc tgcaccatgt
    10741 tcagcttgtg aaagcaaatc actagctaca aatttttcat tagctaaatc atcagctatg
    10801 actaaaactt cactaggtcc tgcttgcata tcaatagctg ctccgtttat atcactactt
    10861 acttggcgtt ttgcttcggt tacaaaggca tttcctgggc caaaaatttt atccaccttt
    10921 aaaacacttt gggtaccgta agccaaagct gctatagctc ctgcaccacc catttgataa
    10981 atttcatcca cgccacaaag cttagcacaa aaaagcacag catcattgat ttttgcagga
    11041 cttgctaaaa cgattttttc acaacctgca atttttgcag gaatagctag cattaaaacc
    11101 gttgaaaaca aaggtgccaa accccctggt atgtaaagtc ctactttttc tatagggcgt
    11161 gttaaaactt cacatttaac gccttttgta gtttcaagag cgatttcatg tgggatttgg
    11221 gcttcgtgaa attttttgat attttcataa gccactaaaa tagcttcttg taaatcttta
    11281 tctaaatgct tgcttgcttg agtgatttct tcttgagtga ttttaatctt tgaaatttca
    11341 gccttatcaa atttcaaagc ttgttctatc aaagcttcat cgcctttttc ttgcacttct
    11401 ttaatgatag aacttactat ttttgaaatt tcatctttcg cacttatagc agggcgtttt
    11461 aacgcttctt ctttttgttt ttcatccaaa ttatcatata ctaaaatttg cattttttac
    11521 tcactttaac attttttcta taggcagaac taaaatcgaa ctcgcacctt cttcttttaa
    11581 agcctccatg gtttcccaaa aaagattttc tttacttacc atatgtaaag ctacattttt
    11641 ttcatcgtgt gctaaaggta agatagtcgg tctttcaact cctggaagta gggcttgaat
    11701 tttatcaagc ttttcttttg gagcatgaag cataatgtat ttagattctc ttgcttgcat
    11761 tactcctgct acacgcaaca taattttatc cactaaggct tgtttttctt tacttaaagc
    11821 attttctttt tgaatcaaac aagcacgaga ttcataaatg actttaactt ctttaagatt
    11881 gtttgcttgt aaagttgccc cgcttgaaac aagatcgcaa atcgcatcgg ctaaatttgc
    11941 cctaggggct acttcaacag aacctgtaag cgtacaattt ttataattaa tcccattttc
    12001 tttcataaaa cgctttaaaa gttgtggata agaagtagct atccttaagc cttcaaaatc
    12061 tttcaaattt tgaaatttat tttcttgagg taaggcaaga gaaagacggc aatatccaaa
    12121 atctagcttt tttaaaagct tatagcttgg attttctcct aaagactggc gttcaagttc
    12181 attttcttct aaaacatttt cccctataat gcctaaatct acaaccccat caaaaataag
    12241 cccagggata tcatcatctc taacgcgtaa aatatctatg ggtaaatttg tagaaaaagc
    12301 gatcaagctt tgttcatgga tatgcatttt aacaccacat tctgaaagaa gctctatgga
    12361 ttcttttgaa agtctacctg atttttgtat cgcaatgcgt aaacgagtgt tttcttgcat
    12421 aacatatcct tgaaattaaa aattaaaaac ttatattagc ataagtagtt gaatttttag
    12481 caagggtttt agaaaataaa taaatttaat tttatttaaa ataattattt aaaacttttt
    12541 atttttaagg tatttaattg aagtattaat cctagcaaaa gctaggattt gattaagcta
    12601 caaattcgat gaaagccatt tcagcagcat caccacggcg aattcttgtt ttgatgattc
    12661 ttgtatatcc accattgcga tctttgaatt ttggagcaat ttcagtcact aatttattag
    12721 tagcgttttt atcttgtaat gaagcaaaaa ctgctctatg agcgttaaaa tctccaagtc
    12781 ttgctctagt aatcaatctt tctacataac ctcttaattc tttagctttt ggtagagtag
    12841 tttcgatttt tccgctattt actaaagcta tagttaaatt ttttaataag gcagcacgat
    12901 gagatgaagt tctgccaagt tttctatatc catgtttatg tctcattctt tatccttcgt
    12961 tttgtgcttt taattctgcg attttatttt taagtatttc tttattatcg ctaagcttag
    13021 aagttcccac aggaaaacct atactttcca tgatgttttt aatttcatca agagattttt
    13081 tacctaaatt tttaagccct gcaagttcac ttacactcat caaagcaagc tcgcctatgt
    13141 aaactactcc tgctttttca agacaattat aacttctagc acttaaattt aaatctgtaa
    13201 tgttttgcaa taatttagta ttttctagtt cattgcttgt tgcttgattt ttaattacgc
    13261 ttctaacatt ggtgatttta tcaaatactg ataattgttt atacatagct tctagagcat
    13321 tttgaaaagc ttcatttgga gtgatttgtc catcagttgt tacagttaaa accacttttt
    13381 cataatcagg attatcttca aacaaaactt tttcaatatc ataggttgct tctcttacag
    13441 gtgtaaagaa agcatctaaa gctataaatt taggatcatt tataagctct ttaatttctt
    13501 cgcttggtac atagccaata cctttttcaa cgatcaatgt gaatttgagt tcagcatctt
    13561 cgttgatagt tgctagatag gtgtctttgt ttactacctc tacttgatca ttatttagat
    13621 ctttgccgta aatttctttt gagcctttaa agctaaattc tactatttct ttatttgatt
    13681 cgcctttaat tttaaagcgt agttttttta gattaatgat aaaaagtgct acatcttcaa
    13741 gcataccacg catgctatca aattcatgag ctacgccatc aatatgaatc gcagttggag
    13801 catatcctat ggtgctagtg taaagtaaac ggcgtaaagg atgggctagg gtgattccat
    13861 agccgatctc aaaaggccaa gcactgattt tagccacagt atcactaatg ttttctattg
    13921 taaattctgt tggcgtataa gcagatgttg taatatttct catatttagc ccctattatt
    13981 tagagtaaag ctcaacgata aatctttcct caaccggaat gacaacttct tctctttcag
    14041 gttttcttgt gaaaattcca aatctcttat ctttttcaac atcaacccaa gcaacgattc
    14101 cagtttgtgc tgtaagttcg atagctcttg taatttgagg attgtttttg cttttttcga
    14161 taatttcgat tttagcacct gcttctactc taaagctagg aatatccact cttttaccat
    14221 ttactaaaac atgtccatgt gttacaagtt gtcttgcaaa acgacgtgtt gtagcaaaac
    14281 ccattctata tactacattg tctaatcttt gttctaaaag ttggataagt aatacccctg
    14341 tatttccttc tcttcttgct gcttcagcaa ataaacgacg gaattgcttt tcgcttactc
    14401 catacataaa tttagctttt tgtttttctc ttaattgaag tccatactca ctaattttac
    14461 cttttcttgc tccgtgttgt cctggtgcat aagggcgttt atctagtgca cttttgccag
    14521 ctagtcttct ttctcctttt aatgctaagc taacaccaaa gcgtctttct aatttttcta
    14581 ctggtcctct atatcttgcc ataatattct cctaaatttt tcttatatct tagacacgac
    14641 gacgcttagg cggtctgcaa ccattgtgag ctaatggagt gatatctttt aagaaagtta
    14701 ctttgattcc ttccatagca cctacactct taacagcagt ttctctaccg cttcctggtc
    14761 cttgtacttt aatgcctact tctttaattc cgtgttcttt tgctttattt aaagcgtctt
    14821 ctactgcttg ttgtgctgca taaggagttg attttttaga acctttaaat cctaaaccac
    14881 ctgcactact ccaagcgata gcatttccca tttcatcagt tactgtaacc atagtattgt
    14941 taaaagtcgc actgatataa acaatacctt ttgctatatt ttttttaact acttttttct
    15001 ttacgatttt tctttttgcc atgatttatc cttatgattt tgcaccaaca gtttttctct
    15061 taccttttct agttcttgcg tttgtttttg ttttttgtcc gcgaactggt aacccttttc
    15121 tgtgtcttaa acctctaaag cttcctaaat ccataagcgc tttaatatcc atagcaactt
    15181 gttttctcaa gtccccttca accatatagt tttcttgaat ttctttacgg atagctgctg
    15241 cttcatcttc acttaactca tgaactcttt tatcataaga aattcctact ttatctagaa
    15301 tttttcttga agtgaaaagt cctataccat aaatataggt tagtccatac tcaattcttt
    15361 ttttctttgg taaatccaca cctgcaatac gagccatgtt tatccttgtc tttgtttatg
    15421 ttttggattt tcgcaaataa tgcgaaccac gcctttacgg cgaactactt tgcacttgtc
    15481 gcacatcttt ttaaccgatg gtctcacttt catgagcgtc tccttgaatg aattccactt
    15541 gatttacgac tacatcaggt tttatgaata accaactatt ttcaaaataa gtggtggatt
    15601 ttaaaaatac ttcttcatat agttcgatgt aatttgtcgc aaaaactcta attttatcta
    15661 aaattagctt ttaaataact tagattattt atatctaaaa gttatacgcc ctttatcaag
    15721 gctataaggt gtaagttcta cttttacttt atcacctggc attattctta tataatgcat
    15781 acgcattttt cctgcaatat gacataaaat tacatgtttg ttgtcaagtt caaccttgaa
    15841 atttgcatta ggcaatgctt caagtacggt gccatcaatt tcaattacat catcttttgc
    15901 caaaattttc tcctttcatg aaataaaaag gctataattt tagcaaaaat tattaaaatt
    15961 tttacttaat ttttagtaat ttttaagtaa ttaatctaaa aatttaggtt cgataaaagg
    16021 cacatgagtc cctataactt tgagttttct ttctttaaat tctttaagta gtttttccct
    16081 tgtttgtata gcctcatttt gatctatatc aaattttata gcgattttag gttttggaat
    16141 ttgtatatca taaagatgaa gtaaatctcc ccaaaagact attttatcat caattattat
    16201 agcattttgt cctggggtat gtccataagc aggtatggct ttaatgcctg aattttgaaa
    16261 gattaaatct ttagagtggt taataaattc tatattttta agtttaagca aggtgttttt
    16321 aatttcttgt ctatcgcttt tgatccaaaa atcatattct tttttatcga ttaaaatttg
    16381 agcttttgga aaaagatttt cttcgctcat taaagcacct atatgatcag gatgcgcgtg
    16441 tgttaagata atatgagtga tatctttaaa atcggttttg tggatatgta atttttcttt
    16501 taatgtatca atagtatcta aaaaccctgt gtctattaaa gcattaaaat ttggattttt
    16561 tatcagagca atattatgct catttctttt gatttttgtg cgagtttttt ctataaaatt
    16621 cttatcttca tcgctttgtg gcactaaaaa agaaaataat aaatttaaaa attcatcatc
    16681 agattgttta agagagatta tatgggtttg atttgaactt ttgcttgtgg ttttttcttc
    16741 taaaaaataa agattggttt ttaaaagagt ggttataaaa ttaaacatat ttatccttaa
    16801 atttttagat aatattttgg aaatgattat agtataataa aaacaatgtt tttaaaattt
    16861 aaggtaatta atcaatgaga aaatcaaaat ttgaaacaaa ggaaattaag atcttaggac
    16921 tttcttcact aggaggaact ttagaatttt atgattttat tatttttgtc ttttttgctg
    16981 aatatatagc taatgtattt tttcctaaag atatgagtga attttgggct ttattaaata
    17041 cttatggagc atttgcagct ggatatttag cacgtccttt aggtggtata gttatggcac
    17101 attttggaga taaatttggg cgtaaaaata tgtttatgct aagtatttta ctaatggttc
    17161 ttcctacctt tgtcttagct tttattccag gttatgaaac tcttgggttt ttagctcctg
    17221 ttttattgat acttataaga atttttcaag gcatagctat aggtggagaa ttgcctggag
    17281 cttgggtttt tgtaagagag tattgtcaag aaaaacaaaa agctttcttt ttaagctgtt
    17341 taaattcagc tatggcttta ggaattttgt taggaagtat agtatttcta atcattaatg
    17401 ctttttttag catagaagaa attgctgctt atgcatggcg tattgctttt tttgtaggtg
    17461 gaatttttgg gattatttct atttatttgc gtagattttt gcaagaaact cctgttttta
    17521 aacaaatgaa aaaagaatca tcgcttagtt cttttccact taaagattta tttaaagaaa
    17581 aggatattgt aaaaaattta ttttcatcaa tgatgatgac ttgggtttta acaggttgtg
    17641 ttattgtgct tgttttatta atgcctaaat ttatgcccag tattttaaat ttaagtggag
    17701 ttgaaggaag ttatttacag atattaggaa ttttgggaat agctttaggc ggggttttta
    17761 tgggttatct tgtagataaa tttggtttat ttaaaatttg cattttcttt tctttagctt
    17821 ttgtattttt ttctttttta tatttttatg ctttatatga gcttaaaaat ttggttttgg
    17881 tgtgtatttt gtattcgatt gtttgttttt taggtggaat taatgtgttc gcacctattt
    17941 taatgagtga agtttttaga gctaaaataa gattttcagg aatttctttt tcttataata
    18001 ttgcttatgc aatttcaggc ggtattactc cgcaactcgt tttttggctt aatacacttg
    18061 cgagtaaaaa tgacaatcca tttttatatg gtatgagtat atatatgatt tttttagcgt
    18121 tattggctat ttgtgctgtt tttatagtaa aagataaaat aaaattttga taatcactct
    18181 taaaatgtta taattaaaat tatattttgg agtttataaa tgccttttat tatggaatta
    18241 cttaagcaaa ataaattaaa gttgatttct tttttgcttt tttcttttat tacaagcgct
    18301 gttggagttt taactcttgt ttttatcaat gattatttgc ttaaaaatgc acaaaacatt
    18361 cctatttttt attttattgt tttgcttttg atttttttta taagttctac catagttgaa
    18421 cttggactta gtatttttgg acaaaatttt atttttaaaa tgcaaaggcg cgtagtaaag
    18481 cagatcttag acaccccttt gttaagagtc gctaaagtag gtaaggctag aattttagct
    18541 tctttgggaa gtgatgtgag aaatatatct tttgggcttt taagattgcc tgatttttta
    18601 caatcaagta tattgatttt atgcactagt gtttatttat gttatctttc accacaaatt
    18661 tttgctttgt gtgtggtatg gattatggtt atttttatta ctaataattt tttgatgatg
    18721 aaagtatatc agtattttag aaaggcaagg gaaaatgatg atgctttgca aaataattac
    18781 caaaatatac tagatggaca taaagaactt ttgatcaatc gtgatagagc taagctttat
    18841 tatgaagatg aatttgaaaa taatgcaaga ttgaaaaaga aaaatagtac tttaggtaat
    18901 ctttttaaca atctctcaaa caactggaca aatgtaactc ttttggtttt agtgggtgta
    18961 gagttttact tagctttaaa atttgaatgg gcaagtgttg cagatgctac aactatagct
    19021 ctttctattt tgtttttacg aaccccttta gtatctatga taggatcttt tcctactttg
    19081 cttttggcaa aaatcgcttt ggataagatc gcaaaattgg aattagatga ttatatagaa
    19141 ggttttaaaa aaacacatta tatcagtgaa tggaaaaaaa tttcttttag aaatactcaa
    19201 tttgcttatg aagaaaattt tcatttaaat cctgtaaata tagaacttaa aaaaggtgaa
    19261 ttggtatttt taataggtaa aaatggaagt ggtaaatcca ctttttgtat gcttttgaca
    19321 ggacttttta agccaagcaa aggcggaatt tatgttgatg atacgcttat agatgataaa
    19381 aatttagatg agtatagatc tcttatttct gctgttttta gcgattttca tctttttact
    19441 aaaaccttaa ataaagaaaa ttttgcaagc gaagaaaaaa ttgctttttg gttggagttt
    19501 ttagaactta aagataaaac aagtgtcaaa gataatgaac tgaccttaac caaactttct
    19561 acagggcaaa aaaagcgttt agctatgctt atagccttgc ttgaagaaag ggatatttta
    19621 gtgcttgatg aatgggcggc tgatcaagat cctgttttta gaagattttt ttataaaaaa
    19681 cttttacctt tgctaaaaga gcaaggtaaa acaatctttg ctatcacaca tgatgatgca
    19741 tattttgata gtgctgatag aattttcttg gctcaaaatg gtgaaatcag cgaattaaag
    19801 ggtgagaata taaaggaatt agctaaaaat ttagtagaaa aatttgatta aagcccaaaa
    19861 tgggcttata ttatttatca tagagctttt tttctatatt gatataaaat tcagcaattt
    19921 ttccataagc aacttcccaa gctttaagag tagcttcgtc aggatttaaa agatttttaa
    19981 tagcttttaa aaggcaagct ccaactatag gataatgctc ttctttaacc cctaaattaa
    20041 catgagttat ggcaacttta tcaacaaagt ttctcatatt ttctaaattt tctatatttt
    20101 tagctgccat taaaatcgcc atcgctaaag cttttggttg ttctcctgaa atttgttttt
    20161 ccatattaaa cataggtttt acctcaggat aatcattaaa cattatttta taaaactcat
    20221 tggttaaatc tactccattt ttttgcaaaa taggcacaca atctttgatg atttgtattt
    20281 gttcttttgt cataatttct cctttttaat gtaaaagaga tattatatat cttaaaaagg
    20341 agaaaaaaat tgacttgtgt taaaattttg tatttagttg attgaaaaag tcttgcatta
    20401 acattgttaa tgctttataa aaatgtgttt tagctttatt gataacatca aaactccaca
    20461 tgttaaacca agtaaaaaat tcttctttta agaatttttg caaaattata tcatcttgtt
    20521 ttttgattaa aaaactaata aataataatt catttatcaa gctatctgca ggttctttat
    20581 taaaaaaaga aaaaaagtta ttttgcacaa aaatttgctt aattttatca gaattatctg
    20641 aataaatttc tttattttca tcaagataaa aagaagcaaa aggcggtgct tttacataat
    20701 caacatcgct taaaaacaaa gatgtaaaat cacttgctat taatttatca tcttcgtttg
    20761 aagatgataa aagctttaaa gcggtgtatt gcaatttgct attattttta aaaaccaatt
    20821 ttgccagaat tcttcttttt taagtttttc tagcaaaaaa tgattaggtg gattttgcaa
    20881 aaattgataa atatatctat tgccaatttt tgcattaaga atgtcccaac atgatttgag
    20941 tacttataag tccataaaat agcattctgg tggtaaatac ccctaaaaat gcacaaagta
    21001 gggcaaaata agcaaaaaat ttacttttaa atttttcatg taaataatta tgcaaatacc
    21061 aagtaacagt cccaagtcct aagaatgcaa aagaaagcga tataaaccaa tcataggttc
    21121 cacctaaaag ttcaaaaggg tttacaagcc ccataatcca agtttgtcct acatgtaggg
    21181 tttgcaaaac tatagcagtg tttaaaagcc ctatacctat aagtcctgta aaaaacgaca
    21241 tttttctttc atgtttgcta ttttcaaaaa aaacaataat aaacaatagc gcctaaaaat
    21301 atagcactag caaaaaaata aagcaaagtg atcttaaaat cccaagtagg cacactttct
    21361 tgcatggagc catataagct ccactcataa agaaaagtcc taaaattcca catattagcg
    21421 taagataaaa cacccaattt gaagttttta gataaagcaa aaagcccaaa gcacacacaa
    21481 gagatacaaa taaaatttca ttattcatcc agcctatgtg ccactcattg tttgcataaa
    21541 aaacacccat tctatttaat acattaaaaa tgtgtgtaat atcatttaaa tgaaaaaatg
    21601 aagggataaa agcaaccatc attgcaattc taaggctaat ccaaaagact ttaaatttgc
    21661 ataatttttg taaccattta taaatgcagg tgcataaacc aaactaagtc caattacagc
    21721 ttgtgctaaa atagtaaata acaccaaagg catttcgctt aaaatgtgat taaatgatgt
    21781 catttttaac tccttggtag ttttgaggta gatgaaaaat cgcactttta ttacctgaag
    21841 gcaaactatg tttttcaggc actatacata aattcggatg cgtgatagaa gcatcaggta
    21901 aaggtgtgat agaggctaaa tttccatgtt cttctctcag ttttgttata tcgcctgctt
    21961 ttaatgttct aaaaggacaa gagtccacgc aaattggatt tttaccttct tttaatctct
    22021 cataacaccc atcgcatttg ctcatatgac cactttcatg gttaaattga ggtgcgccat
    22081 aaggacatgc catagcacaa gctttgcagc ctatacacat actatcatcg attgctacta
    22141 ttccccattt tattttcatt gttgcaccag ttggacaagc tttaagacaa gatggattag
    22201 aacaatgatt gcaagaaata gaagtgtagt aagcaaaaac attttgctca aaacttccat
    22261 cttctttaca ggtccaattt cccccttcag tctcaaacac acggcgaaaa ttaactccca
    22321 caggcatgtt tttataatcc ttgcaagaaa gtgagcaagt cctacagcct acgcatttgc
    22381 tttgatctag cataacacca aattgtgaat tttcttctaa tttcatcttt ttctccttaa
    22441 acttttgcaa tttcaactaa aatagaatgt tgtccatttc ctttagaaat agcagttggt
    22501 actatacttg ccaaagaatt cacacaagtt cccacatcga taccattttc atattttgcc
    22561 catgcacctt gtggggttac tgcacaacct ggtatgattt ttggagtaat ttttgctatg
    22621 ccttgtatga ttcctaagtc atttcttact tgcaccacat cgcccgtttt gatacttctt
    22681 tgctctgcat ctatggtatt tatccaaatt tcttgtggat tagcttctct aatttgtgga
    22741 atttcccaaa agctagaatg cgttctacct ttgtagtgat agccaaaaaa ttgcaaagga
    22801 tacttttgtt ttaatggatc taaaatccct tctctttggc tttcaaaaac aggaataggt
    22861 actatttgtt gtccttcttt taatttccaa gttttttgca tttgtgcgag ttttgtgcta
    22921 taaatttcta tctttccgct aggagttttt aaaggattat tgataggatc ttttataaaa
    22981 ctttgtaatg ccactacagg ttttacaggc tcaaatttta caagtccttt ttcgcacatt
    23041 tcttcaaaac taggcaaaag tggatttttt ttcatacttt cttcataaag gtattttagc
    23101 caatcttttt gtgttcttcc ttcgctaaat tctttttcta tgccaagtct tttagcaagt
    23161 tcaagacaca ttttataaat aggttttgct tcaccaactg gctcgatagc tttttgacaa
    23221 taaataatat aaggcttatt gctataatat cctgcgctag gtcttataaa atcttcttgc
    23281 tctagcatag ttgcatcagg taagatataa tctgcgtagt tatttgacgg agttctagtt
    23341 acattaacat ctattataca ctcacacaaa ttctcatcgc ttaaaatatc atgcacttct
    23401 ttaattgtgc tgtgctgatt tgtaagacaa tttcctgctg tattgaaaat aaattaatat
    23461 tttgttttaa ttgtgttgtg ccacgcaccc catcgctaat atctgtcatt tcttttccac
    23521 gataaatagc atctgtgaat aaaaaacaag gaatagaatc ttttattgga tttttaaaag
    23581 gcatacctat tatatcatat gttttacttg accctgttcg acatcctgta tttgtgcctt
    23641 ctatgccaat atttcctgta atacaagcta gagttgctat cgcccttgca ttttgttctc
    23701 catttgaatg tctttgcact ccccaacctt gttctataaa acaaggcttt atggtggcaa
    23761 tttctcttgc aagttgaact atgcggcgtg ctggattttt gtaatcttgc tagcccaatc
    23821 aggagttttt tctactccat cgtttagtcc taaacatagc tttcatagct tgagtttttg
    23881 gctgcatctt gtggcagagt attttcgcta aagcctatgg tgtatttatc aagaaaagtt
    23941 ctatcaagta aatcttcttt tatcatcaca taagttagcg cagcaattaa agctgcatcg
    24001 gttcctggtg ctataggtat ccactcattg caatgcccta tcatagaatc attgtatctt
    24061 gggtcaatgt gaattatttt acatccactt tcttctaagg ctttttgata agcatagcct
    24121 actccaccac ctcccattct agtttcaaca tgatttgctc taaaaaatat agctaatttt
    24181 gcagagtgta aagtgtatat atcgctagca ggagatccac catagaaaaa attcatagca
    24241 tttgaaattt gagccgtaga ataagaatta tgataattta aataaccacc ataaagactt
    24301 aaaagtctag cccatggacc ttgtgtacag cgattgatta ttgttcctgt tgttcctgtt
    24361 gcataattta tataaaaggc ttcattgccg tatttttctt taatttcttg cattttggca
    24421 gaaatttcat caaaagcttg ttcccaagaa ataggcataa atttaccttc gcctcttttt
    24481 cccactcttt ttaatggtct ttttaagcga tttgcattgt aaactttata tcttgaacta
    24541 cgccctctaa tacaggctct tgcttgacga ttatcaaagc tatcatcacc ttcatgatca
    24601 gtactaacat atttaataat tccatcttga gtatgcactt ttacaggaca ttttgtttcg
    24661 caatttacat tacatccagc ccatttgctg atcaatggtg gagtttttaa taaatttgca
    24721 cttagactta taggacttaa ggttaagccg ccaaacaaag aactccattt taaaaaatct
    24781 ctacgatttt gttccgtgtt atctccttac atttatgtga caaaaagtaa ttgcgattat
    24841 agtacaaata ataattttat tcaattaaaa ttaagacttt aaaactccta aatataggct
    24901 ttataatgaa tttttcgttt atgaatttaa cttcaaaaaa taaaaatttg aataatataa
    24961 tgataaaaat ttattaaaat agtatttaaa tataaattta taactaaaat ataactttat
    25021 cccccgtata ggcttgcgag ttgagttttt ttgttttata attttgtgcg ttattaaaat
    25081 aaaaaggttt tttatgttga gatttttaat ttttgcaatg ttgttgtttg tgaatttaga
    25141 agcaaaaatc ccaaaagata cacttattat agcagttgaa aatgaaatcg caaggataaa
    25201 tcctgcttat agtgaggatc acgatgcagt gattaatctt gtattttcag gacttacgcg
    25261 ttttgatgag catatgagct taaagcctga tttagctgcg tcgtggaatg ttagcaagga
    25321 tggacttagc tatgatatct ttttgcgtga agatgttttg tggcacgatg gagtgaaatt
    25381 tagtgccgat gatgttaaat tcagtcttga agcttttaaa aatcctaaaa ataattcttc
    25441 tatttatgtg aattttgaag atattaaaag tatagaaatt ttaaatcctt atcatcttaa
    25501 aatcacgctt tctaaacctt ttcctgcatt tttagatgct ttaagtatag gaatgcttcc
    25561 taaacattta cttagtgata aagacttaaa tactgcttct tttaatcaaa atcccatagg
    25621 cacaggtcct tataaatttg taaaatggaa aaagggcgaa tatgtagagt ttaaagctaa
    25681 tgagaatttt tatcttacaa aagtaaaaac cccaagactt atcatcaaac atatttttga
    25741 tccttcggtt gcaagcgtag agcttaaaaa tggcaaaatt gatgcggctt tgattgatgt
    25801 ttctttattg aatattttta aaaaggatga aaattttaaa attttgcgtg aaagatctgc
    25861 tgattataga gctttaatgt ttaatttaga gaatgaattt ttaaaagata ttcaaataag
    25921 aaaggcttta aattatgcta ttgataagca aagtatagtc aaaaatcttt tgcatgatta
    25981 tggttttgta gccaatcatc ctttagagcg ttcttgggcg gattctaaag cttttaaaac
    26041 ttatgaatac aatcctaaaa aagcccaaga tttgattttg gctttaggtt ttaagaaaaa
    26101 cgatgagggt atttttgaaa aagatggcaa gattttagaa tttgaaattt gggcgatgag
    26161 taatgatcct ttaagggtaa gtttggctgg aattttgcaa agcgaattta gaaaaatagg
    26221 agttgtaagc aaggtggtgg ctaaacctgc tggaagtttt gattattcta aagtagatag
    26281 ttttttaata ggctggggaa gtcctttaga tcctgatttt cacactttta gggtatttga
    26341 aagttcgcaa gatagtgctt taaatgatga gggttggaat tttggacatt atcatgataa
    26401 aaaagtggat atagccttgc aaaaagcaag aaacacttca aatttggaag agagaaaaaa
    26461 atattataaa gattttatag atgctttgta tgaaaatcct ccttttattt ttttagccta
    26521 tcttgatttt gctttagttt ataataaaga tttaaaaggt atcaaagcaa ggactttagg
    26581 tcatcacgga gtgggtttta cttggaatgt ttatgagtgg agtaaatagt gctaaaacgc
    26641 ttagttttta gtattgtcgt agcatttttt agcacttttt tatgttttgt tttacttcat
    26701 tttagtaaag gcagtatagc ttatgctaat ggagttaatt cacaaagtaa agaatttgtt
    26761 caaagaatag aacaaaattt agggcttgat aagcctttgc tagagcagta taaaatttgg
    26821 ctttttaagg ctttaaaagg agatttagga gtttcttttt taagtggaga aagtgtttta
    26881 aagcttataa aagaaagaat ttttaatact tttattttgg gttttagtgc cttaatgctt
    26941 ttatttttac tcagtgtttt tttggcactt ttgggatatt attataaaga aagttttata
    27001 gataaaatca tcactttttt agcttttaat ttttttgctt tacctccttt tgttttggct
    27061 ttattgtttg ttttgatttt tggaattttt tggaaaattt tgcctgttat gggaagtagt
    27121 gatataggct ttgaagatga ttttttaaat cgtttagagc atttgatttt gcctgttttg
    27181 gtgctcgttt tatcacattt ggcgttattt ttaaggattg ctagaaattt tatcaatgaa
    27241 agtttttctc aaatttttat tcaaaattta tacgctagag ctttaaggga gaaagatatt
    27301 tattttttag ttttgaaata ttctttaagt cctattgtgg cttattttgg gggaagtgct
    27361 ttaagtttta tgatgggaac ttatgtggta gaaagtgtct ttgcttacga ggggcttggg
    27421 tctttacttt ttaaaagtat tatttttaaa gattatcctg ttgtacttgc acttatattt
    27481 tttagcgttt tgcttgcaac attttttaca tttttaagtg atattgtagc taggatttta
    27541 aatcctagat taagaaggct tgattttgtt taaatttctt atcattcttg cgcctttaat
    27601 ttttttgttt ttatgcgcct tgtttgcacc ttttttggct ccttttgata ttttaagcac
    27661 tcatttagaa aatttgcatc aagctcctaa ttttacttat attttaggga ctgatttttt
    27721 aggcagagat ttgttttctc gtttgctttt tgctttgaga aattctttga ttataggtgt
    27781 tggtggatct ttattgtcta ttatctttgc tttgtgctat ttgtttttag cgcgatgttt
    27841 tttttacgtt ttttggatgc gtattttaga gtttttttta gccttgcctg cttttttact
    27901 tatgatgttt tttcaaagta tgataacttc tgatgtgttt ttgatgattt ttttaatcgc
    27961 tttaattcat tggtgtttca tagcaagaat tatagaaagt gaattaaaaa gacttgaaaa
    28021 tttagatttt tacaaagcaa atatagtgct tggaagaact aaatttagag ctttttttaa
    28081 agatttaata cctgctttaa aaacactgat ttttacactt tttatattta atatcgttca
    28141 tgctatagcc acagaagcta ctttgagttt ttttggactg ggtttaggat ttgaaattcc
    28201 aactttaggt actcttttga gtgagtcttc aaaagtagtt tttataggtg cttggtggat
    28261 aatacttttt ccacttttaa gcttgctttt gttgttttta cctcttttat ggttgggtaa
    28321 ttttttacaa aaaatttggg gtataagatc ttgaaggtaa gaaatttaaa tatcagtttg
    28381 aagaataatt tattgcttaa ggatattaat ttagatataa aaacaggcaa aactttaatg
    28441 atactaggac aaagtggagt gggtaaaagt ttgttgggaa aagctttggt aagactttta
    28501 gattctaatt tcacaataag ttttgatgaa ttaagttttc ataattcttg tatttttaat
    28561 tttaacaaag aagagcttag aaattttcgt tctaaggtgg cacttgtttt gcaagatgca
    28621 gagcttagtc tttatcctta tttggatatt ggaaatttat gtcatcttgt tttaaaaact
    28681 catacaaaat taaaacaaaa agaaagaaaa gattacgctt tttcttattt tcaaaaatta
    28741 ggatttgaaa atcttgatcg tttgtggcat tcttatgcta atgaattaag tttgggtatg
    28801 gcaagaaggg tgagcctagc tttggcatta ttaaatcaac cccaaatttt aatttgtgat
    28861 gaaatcacag cttctttgga taaaaaaaac gcttcaaaga tcatatcgat tttagaagaa
    28921 ttaaaaaata ctacagcctt agtttgtatc actcatgatt taaatttggt aaattcttta
    28981 gcagatgaaa ttcttatgct agaaaaaaat agttcaaatt tatatagctt agatgagttt
    29041 ttaaggtatt ataatgctta aagtttgtaa tttaagtaag ttttatgagc ttaaaaagca
    29101 ttggtattta aaaaaagaaa gacatattat ttttgataat gtcaattttt ctttaaatga
    29161 aaatgacaat ttaataattt taggtaaaag tggtgcaggt aaaagcacat tagctagaat
    29221 tctttgtttt ttagaagatc caagtgaagg tgaggtatgg tatgaaaatc ttaacttgca
    29281 caagcttgat aaaaacaaac aaagactttt aagaaagcaa attcagtatt gctttcaaga
    29341 tcaaaaaatg gctttaaacc cttataaaaa aatcaaaaat cttatacaag atggtttgga
    29401 aaattttaat ttacaaaaga atgatgactt gattttagaa ttttttgatt tttttagtct
    29461 aaaaaagcaa attttaaaac aaaaacccta tgagttaagt ggaggagaag ccacgcgtgt
    29521 aggtcttatc cgtgctttgg ttttaaatcc taaattgttg attttagatg aaattacttc
    29581 agcacttgat attaaaactt ctaaagaaat tttaactttt ttatatgact atcagca
//
LOCUS       DARATF010000006        29343 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.006, whole genome shotgun sequence.
ACCESSION   DARATF010000006 DARATF010000000
VERSION     DARATF010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29343
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.006"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..672
                     /gene="ung"
                     /locus_tag="SB502_000217"
     CDS             <1..672
                     /gene="ung"
                     /locus_tag="SB502_000217"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEG0433713.1"
                     /translation="DKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQNIVIYPPAN
                     LIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNIFKELQNDL
                     NITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHKLSNEKSGL
                     VFMLWGNYAKNKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANEFLKKVGKIPI
                     DWKIV"
     gene            792..1487
                     /locus_tag="SB502_000218"
     CDS             792..1487
                     /locus_tag="SB502_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEG0433714.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVN
                     FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPIL
                     HIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDII
                     FNELCKGEIKQDSKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLI
                     HALDAANEALKDL"
     gene            complement(1681..2805)
                     /gene="cydB"
                     /locus_tag="SB502_000219"
     CDS             complement(1681..2805)
                     /gene="cydB"
                     /locus_tag="SB502_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEG0433715.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFINNINDENIKIRAMKKLMINSILFL
                     PFFLGFLAWIFLKDGFSVDANGVVSMSANLYLYNFLNQMIFAVLLAIGVILVLLGMFQ
                     GAKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(2805..4367)
                     /locus_tag="SB502_000220"
     CDS             complement(2805..4367)
                     /locus_tag="SB502_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEG0433716.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKENNDTIAMANHKSILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            complement(4368..4601)
                     /locus_tag="SB502_000221"
     CDS             complement(4368..4601)
                     /locus_tag="SB502_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HEG0433717.1"
                     /translation="MYLKHLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            4714..5520
                     /gene="cdtA"
                     /locus_tag="SB502_000222"
     CDS             4714..5520
                     /gene="cdtA"
                     /locus_tag="SB502_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HEG0433718.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQEIPSLISGADLVPITPITPPLTRTSNSANNNVVNGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLIDSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIVHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            5517..6314
                     /gene="cdtB"
                     /locus_tag="SB502_000223"
     CDS             5517..6314
                     /gene="cdtB"
                     /locus_tag="SB502_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HEG0433719.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRMQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            6325..6894
                     /gene="cdtC"
                     /locus_tag="SB502_000224"
     CDS             6325..6894
                     /gene="cdtC"
                     /locus_tag="SB502_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HEG0433720.1"
                     /translation="MKKIITLFFIFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPIFFAEVNELMIITPPLTAATPLE"
     gene            7066..8748
                     /locus_tag="SB502_000225"
     CDS             7066..8748
                     /locus_tag="SB502_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEG0433721.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGIKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTVFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIVCIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSITGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWVTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIVLIGIWTCIIAFFLQGIIPEVIVK"
     gene            8868..9608
                     /locus_tag="SB502_000226"
     CDS             8868..9608
                     /locus_tag="SB502_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEG0433722.1"
                     /translation="MMKKVYFYATCLGTAAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKV
                     KDFSSRVIELSQYLDEVLKVDYEDKGAPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGERL"
     gene            9605..11044
                     /locus_tag="SB502_000227"
     CDS             9605..11044
                     /locus_tag="SB502_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEG0433723.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRSKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANNVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWAVQNFASVLPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            11037..11693
                     /locus_tag="SB502_000228"
     CDS             11037..11693
                     /locus_tag="SB502_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEG0433724.1"
                     /translation="MSKIDEISSKSKASILEHLKKAYKETDFTRIESIDPVEHIQTTQ
                     DMLAEMKQKMSDNKYIVENATKDTLEEKINEIVARYGFKSMIYGADLNLNLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCIVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
     gene            11867..12162
                     /locus_tag="SB502_000229"
                     /pseudo
     CDS             11867..12162
                     /locus_tag="SB502_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871941.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
     gene            12138..12305
                     /locus_tag="SB502_000230"
     CDS             12138..12305
                     /locus_tag="SB502_000230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433725.1"
                     /translation="MSYLIQNIKTTNDLKEKLYTVSKKWLLEHILYKDVKVEQYRRSS
                     LTSEDDGGSKL"
     gene            12283..12489
                     /locus_tag="SB502_000231"
     CDS             12283..12489
                     /locus_tag="SB502_000231"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433726.1"
                     /translation="MMGEVSFEEVKEEKDDENTVYLYTCECVEQMHDVPFGIHQKIQL
                     KGVKFKCKKCKEAIQFYKKYSENF"
     gene            complement(12731..13762)
                     /locus_tag="SB502_000232"
     CDS             complement(12731..13762)
                     /locus_tag="SB502_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HEG0433727.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCAEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(13841..14737)
                     /gene="sppA"
                     /locus_tag="SB502_000233"
     CDS             complement(13841..14737)
                     /gene="sppA"
                     /locus_tag="SB502_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEG0433728.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILMPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            complement(14725..15954)
                     /locus_tag="SB502_000234"
     CDS             complement(14725..15954)
                     /locus_tag="SB502_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEG0433729.1"
                     /translation="MFIVTARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESK
                     AENIWLRESKGSFKKWLENFTLHPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            16045..16524
                     /gene="aroQ"
                     /locus_tag="SB502_000235"
     CDS             16045..16524
                     /gene="aroQ"
                     /locus_tag="SB502_000235"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEG0433730.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            16527..17000
                     /gene="folK"
                     /locus_tag="SB502_000236"
     CDS             16527..17000
                     /gene="folK"
                     /locus_tag="SB502_000236"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEG0433731.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
     gene            17010..18464
                     /gene="flhF"
                     /locus_tag="SB502_000237"
     CDS             17010..18464
                     /gene="flhF"
                     /locus_tag="SB502_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HEG0433732.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLAKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSF
                     FSIGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            18457..19323
                     /gene="flhG"
                     /locus_tag="SB502_000238"
     CDS             18457..19323
                     /gene="flhG"
                     /locus_tag="SB502_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HEG0433733.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDEIKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            19342..19698
                     /locus_tag="SB502_000239"
     CDS             19342..19698
                     /locus_tag="SB502_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433734.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNEFKERRRNAKRAA"
     gene            19679..20371
                     /locus_tag="SB502_000240"
     CDS             19679..20371
                     /locus_tag="SB502_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HEG0433735.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLEHECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            20371..21450
                     /gene="fliM"
                     /locus_tag="SB502_000241"
     CDS             20371..21450
                     /gene="fliM"
                     /locus_tag="SB502_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEG0433736.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            21447..22289
                     /gene="fliY"
                     /locus_tag="SB502_000242"
     CDS             21447..22289
                     /gene="fliY"
                     /locus_tag="SB502_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HEG0433737.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNTSDTLKAP
                     LVYAIFNIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNTEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            complement(22338..22934)
                     /locus_tag="SB502_000243"
     CDS             complement(22338..22934)
                     /locus_tag="SB502_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEG0433738.1"
                     /translation="MEKILKILLFLPILTLSAKAEWVVKSYQEIKNERVIRQTYEQSC
                     GASSLATLLNILDDKKFDELELLKIMSGQELYTDMVSFADLSDAVKKLGYESNSYQIN
                     RENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIWD
                     RYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
     gene            complement(22919..23773)
                     /locus_tag="SB502_000244"
                     /pseudo
     CDS             complement(22919..23773)
                     /locus_tag="SB502_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            23906..24421
                     /locus_tag="SB502_000245"
     CDS             23906..24421
                     /locus_tag="SB502_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433739.1"
                     /translation="MLKKLVNCLILGSLFTSSAFAGDFLAKVSNGALSDNSQGVKALN
                     LDEMKQVKGGYQVLTSKLGNSEYIALAIPDNTTTYKQLVAIYTVTGDNTFSNTFLGYT
                     VKRNIAISSSGKPYVLFNYGVALLDRQTGLHRVNSSEILNNNQVIKELTMKYKTQFES
                     NLGGWTARARR"
     gene            24491..25639
                     /locus_tag="SB502_000246"
     CDS             24491..25639
                     /locus_tag="SB502_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433740.1"
                     /translation="MINGINSYSSYNYTNTFSNNTSNIKSSNVANDNSSLVSDKSRAV
                     SKMLGYGVDKDGFFTSDFNEAAGLPKDYKIYAKDIENFVNIQTKSLLSSCINIDIAKS
                     IGNAYKVFSQLLNDELNNKINFTKEDLVKIPQGFEFNQNTLEINKKYNLNDKEYKDFM
                     SNYQNYSPTSHNIKIMTFFSLDDKSDIFKYSLIDPTPYSNNDKTITKSGIFMTFFTGF
                     QAKNYFIEGQTSILGKMQGFDKTMSQSEIDNLNKFISENSMNFKGDIFKLFDLLNSDM
                     SIDDFKQKILEQKENLNNPTKNTNNKETSEEDKKKPFKPIQAQSSSETYKDDNKMNEL
                     LKKLLENKFGTSDELELLFGMKFSDDNTGEFNKIISQNTAQKSIDIKA"
     gene            25760..26365
                     /locus_tag="SB502_000247"
     CDS             25760..26365
                     /locus_tag="SB502_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEG0433741.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILA
                     QKCVQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            26365..27381
                     /gene="mnmA"
                     /locus_tag="SB502_000248"
     CDS             26365..27381
                     /gene="mnmA"
                     /locus_tag="SB502_000248"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEG0433742.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEIKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIYEDKSAKIILKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(27433..27654)
                     /locus_tag="SB502_000249"
     CDS             complement(27433..27654)
                     /locus_tag="SB502_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0433743.1"
                     /translation="MFFIVQLALGAPPLFYAFIMIASGNVMMALTHYAIGTAPVIFGT
                     GCVTLKKWWSTGFVISIVDIVVMIAVGLV"
     gene            complement(27777..28040)
                     /locus_tag="SB502_000250"
     CDS             complement(27777..28040)
                     /locus_tag="SB502_000250"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0433744.1"
                     /translation="MKKSFSVFLSRFYFYGLELWACFFGISLDATSVALLGLSLVLIS
                     GVLTFGEVLAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA"
     gene            complement(27955..28170)
                     /locus_tag="SB502_000251"
     CDS             complement(27955..28170)
                     /locus_tag="SB502_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0433745.1"
                     /translation="MFITATAPNPLVLYFLSPLEIKSTPNASTFAKDKLKELVKMKNS
                     EKIILSVFVSLLLLWAGALGLFFWNFS"
     gene            complement(28113..28457)
                     /locus_tag="SB502_000252"
     CDS             complement(28113..28457)
                     /locus_tag="SB502_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0433746.1"
                     /translation="MARGVIKTGLGEHLAYHFISILGKKTLGIAYSIAFCETILAPVT
                     PSNTARAGAIINPIVQVIARSFKSTPEDGTQNKIGTYLSLVNYQEPILFHQLCLLQLQ
                     LQILWCFIFSLR"
     gene            complement(28680..28829)
                     /locus_tag="SB502_000253"
     CDS             complement(28680..28829)
                     /locus_tag="SB502_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:sulfate symporter"
                     /protein_id="HEG0433747.1"
                     /translation="MEDNSWHFLGLFIAVIMAVILQVMPLGPVCMIAIAIVALSGITT
                     TQLKI"
     gene            complement(29056..29153)
                     /gene="ffs"
                     /locus_tag="SB502_000254"
     ncRNA           complement(29056..29153)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="SB502_000254"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
BASE COUNT        10878 a         4483 c         4615 g         9367 t
ORIGIN      
        1 gataagatta aaataaatga tgactggaaa gaatttttaa gagacgaatt tcaaaaaaaa
       61 tattttctag aaatcaaaaa acaataccta aatgcgatta atcaaaatat agttatttat
      121 ccgcctgcaa atttaatctt taatgctttt aatttatgtc ctttaaaaga aattaaaatt
      181 attatcctag gacaagatcc ttatcatcaa ccaaatcaag caatggggct tagtttttcg
      241 gttccaaaaa atgtaaaaat cccaccaagt cttaataata tttttaaaga attgcaaaat
      301 gatttaaaca tcactccagc aaaaagcgga gatttaagct cttgggcaaa acaaggagtt
      361 ttgctcttaa attctattct tagcgttgaa gcaaataaag cagctagcca tagttcgtgg
      421 ggttggcaag aatttagtga tgctataata cataaattaa gtaatgaaaa atcagggctt
      481 gtttttatgc tttggggaaa ttacgcaaaa aacaaggaga ttttgattga taatactaag
      541 catttgattt taaaagcagc tcacccaagt cctttagcta gaacaggatt tttaggttgt
      601 aagcattttt caaaggctaa tgaattttta aaaaaagttg gtaaaattcc tatagattgg
      661 aaaatagttt aaaaaattat tttaaacttt aataaaaata ttaaaatata tttatttatt
      721 taaaaataaa tcatatttct atgaaatata ttgtaataaa acgactcaaa aattaattct
      781 taaggagaaa aatgaaaacc attggtatta taggcggaat gagttttgaa agcactatta
      841 cttattataa aacaataaat caagctataa atgataaatt aaaatcttta aattctgcaa
      901 aaattttact ttacagtgtt aattttgaag aaatagaaaa tttacaaagc caagataaat
      961 ggcaagaagc tgcacaaatt ttgactcaat gtgctaaaaa attagaactt gcaggggcta
     1021 attttataat aattgcaact aatactatgc ataaggtttt tgatgaaatt caacaaaata
     1081 taaatatccc tattttacat attgcaaaaa gttctgctaa ggctttaaaa caagaaaaca
     1141 tacaaaaaat tggtttattg ggtactaaat acacaatgac gcaggatttt tataaaaaaa
     1201 tgctgattga agaaaatatt agcgttatta ctcctagtga tgaagatata aaaatcgtta
     1261 atgatatcat ttttaatgag ctttgcaaag gtgaaatcaa gcaagattct aaagaaaaat
     1321 atttaaatat tataaaaaaa ctacaagaaa aaggggcaaa aggagtgctt ttagcttgca
     1381 ctgaaattgg tttattaata tctaaaaatg atacaaatat caaaattttt gacacaagcc
     1441 ttattcacgc ccttgatgct gctaatgaag ctttaaaaga tttatgatta aaagatgccc
     1501 aaaaatgggc aaattgcaat attttgaaaa gatttatact tatatcggtt taaatcttat
     1561 cttgctttat agtttgctat ctttttctaa ttgattgata tttagcatta taaatttata
     1621 gctcagataa attactaaag gccaagccaa taaaaacaaa gcatgtaaca ttttttctcc
     1681 ttaatatgcg tgatcatcat ttgcgatttc ttcgcgtgta atttttactt tatccattgc
     1741 attccaaaca tagataatat aagctaaaac aaaaggtaca agtaaagaca cataagccat
     1801 gacgcttaga gtataatagc ttgaacttgc attttttaaa gttaaagaac tttgcaaatc
     1861 acttaaagat gggtaaaaag cactttgacc taaaccaatg cttgataata aagcaaaaac
     1921 tgttaaaacc gttccaagtc ctagggtaaa aatagcttta gagcaacctt ttgctccttg
     1981 aaacatacct aaaagcacta aaatcacacc gatagcaagc aaaacagcaa aaatcatttg
     2041 atttaagaaa ttatataaat ataaattcgc actcatgctt acaactccat ttgcatctac
     2101 actaaaacca tcttttaaga aaatccacgc taaaaaacct aagaaaaaag gtaaaaataa
     2161 aatactattg atcataagtt ttttcatagc tcttattttg atattctcat cattgatatt
     2221 gtttataaaa tacgctgcgc ctaaaagcct tgctaaaaat actaaagcta agcctaagag
     2281 ataattaaaa ggattaagta aaagttctaa gccgtgcaaa ggattttgcc aagaaacaaa
     2341 attatgctca tttaagataa attcagaacc gctaaaaaag ctacttactg caactccgat
     2401 taaaaacaca cctaaataac cattaatttt aagaaaaatt tcataggttt tagagccata
     2461 aacattattt tcttttttgc gatattcata agccacagcc tgtaaaataa aacaaaataa
     2521 aatacaaagc caagcccaat aagctccgcc aaaacttgta ctataaaaaa gtggaaaagc
     2581 tgcaaaagct gctccgccaa aaagtacgag agttgtaaaa ccaagctccc atttacgccc
     2641 taaagaattg actagcatgg ttttttcaag ctcatccttg ctaagctcat cgattaaagt
     2701 ctgtccacct tggacaaaaa acataaaaac caaaagtccg ccgagtaaac ttaaaatcaa
     2761 ccaccaataa atttgcaaac cttcaagttc taaaccaaaa aacattattt ttctcctttg
     2821 cccataagtg gagtatgtcc tgcatgtgcg tcaaaacctt ttttaatctg agtaagcatg
     2881 attttaactt ctgcaatcaa taaggctgta aaaagtactg caaaaatcca aaatgaaatt
     2941 tgaacattga cttttccaag ttgtgttgct gcgatatgta caggaagcaa gtcttgaatt
     3001 gcccaaggtt gtctgcctac ttcagcaaca atccaacctg cttcagcggc aatataaccc
     3061 aatggaatgg ataacaaaca cacccaaagt acttttctaa atttctcaat atcatttgcc
     3121 atggtaagat aaagcgtaac gatgaaaagt aaaaagaaaa aacttcctaa agcaaccatg
     3181 atatgaaagc tataaaaagt taaagccaca ggtggaatag tatcgcttgg tttttctaaa
     3241 tatccataac caaaatcttt aaaatgagtt tctaaaatgg atttgtgatt tgccatagct
     3301 attgtatcat tgttttcttt agcaagttta tagtctttta gagcttgtat agcgattttt
     3361 cctctatcga tacgattttg cataggttct atacctttgc tttcatttcc atagatcaaa
     3421 tcttcaattc ctggaacaaa agaatttgga tcacggtttc ctaatataga aagagcgtaa
     3481 ggtatagtaa tgtcaaataa aaacacactt tcgttattat ctatggtttt tttaggattt
     3541 aaaattccaa aaggtacaag tcctgcacga tgttcacctt gataaacccc ttccatagct
     3601 gcaagtttca taggttgagt ttgagttaca cggtaagcgc tttcatctcc gctgaaaaac
     3661 aaaaagattg aacaaaccaa accaaaacta gctcctacaa ctaagctttt tttagcctcg
     3721 ataatatggc gtccttttaa cataaaccaa gctgaaattc ccattacaaa taaagctgaa
     3781 atcacataac cactgcctat ggtatgtaaa aattttgaaa tagctacagg agaaagtgct
     3841 acttcaaaaa agctttgcat ttcatttctt gctgtgtcag ggttaaagct cattcctaca
     3901 ggatattgca tccaaccatt tgccactaaa atccaaaaag cagaaagatt acttcctata
     3961 gccacacacc aagttgaaag taagtgaaaa cccttgctta ctttatccca gccaaaaaac
     4021 ataactgcaa aaaaagtagc ctctaaaaaa aatgccataa taccttcaac cgccaaaggt
     4081 gcaccaaaaa tatcacccac aaaccagcta taatttgccc agtttgttcc aaattcaaat
     4141 tccattataa tgcctgtagc tacaccgata gcaaaattta tagcaaataa tgaaagccaa
     4201 aatttggtga tttttttcca tctttcattt ttagttttta catagatggt ttccatgata
     4261 gcgatcataa aagacaagcc taaggttaaa ggcacaaaca aaaaatgata aagtgcagtt
     4321 aaagcaaact gcgctcttga ccaatcaacg ctactaagtt cgttcattta ttttccttcg
     4381 agtgtaagat ttttgagtac aaaagtgctt ttttctttgt cgcttttaaa aatagaatta
     4441 aaatttacat caaaaacaaa aagttttaaa atcacaaaca taacaaaaag tttgataaaa
     4501 ataattttcc aaagggtctt tccaagagtt aaatttttaa aaccttcttt gtaaaaatta
     4561 aaaatttgag agatgctaaa atataagtgt ttaagataca tgtaaattct acctttaaaa
     4621 acaacaaaat aaaacatttt taaaaagcgg aaaattataa tgaaatttat gttattattt
     4681 tcttaaaaat ttaaatacat atcaaggttt ttaatgcaaa aaattatagt ttttatttta
     4741 tgttgtttta tgactttttt tctttatgca tgttcttcta aatttgaaaa tgtaaatcct
     4801 ttggggcgtt catttggcga atttgaagat actgatcctt taaaactagg acttgaacct
     4861 acttttccta ccaatcaaga aattccaagt ttaattagcg gtgctgattt agtacctatt
     4921 actcctatta ccccaccttt aactagaaca agcaatagtg ccaacaataa tgtagtaaat
     4981 gggatcaatc ctcgctttaa agacgaagct tttaatgatg ttttaatttt tgaaaatcgc
     5041 cctgcggttt ctgatttttt aaccatttta ggccctagcg gagcagcttt aacggtttgg
     5101 gctttagcac aaggaaattg gatttggggc tatactttaa tcgatagtaa aggatttggc
     5161 gatgctagag tttggcaact tttgctttat cctaatgatt ttgcaatgat taaaaatgcc
     5221 aaaaccaata cttgtcttaa tgcttatggt aatggaattg tccattatcc ttgcgatgca
     5281 agcaatcacg cacaaatgtg gaaacttatc cctatgagca atacagcggt tcaaattaaa
     5341 aatttaggaa atggaaaatg catacaagca cctattacaa atctttatgg tgattttcac
     5401 aaggttttta aaatttttac cgtagagtgt gcaaaaaaag ataattttga tcaacaatgg
     5461 tttttaacta ctccgccttt tactgcaaaa cctttatatc gccaaggaga ggtacgatga
     5521 aaaaaattat atgtttattt ttatctttta accttgcttt tgcaaattta gaaaatttta
     5581 atgttggcac ttggaatttg caaggctcat ccgcagccac agaaagcaaa tggagtgtta
     5641 gcgtaagaca acttgtaagt ggagcaaacc ccttagatat cttaatgata caagaagcag
     5701 gaactttacc aagaacagcc actccaacag gacgccatgt gcaacaaggt ggaacaccta
     5761 ttgatgaata tgagtggaat ttaggaactc tttcaaggcc tgatagggtt tttatttatt
     5821 attctcgcgt tgatgtagga gctaatcgtg taaatttagc tatagtttca agaatgcaag
     5881 ctgaagaagt gattgtttta cctccaccta ctacagtttc aagacccatt ataggaattc
     5941 gcaatggaaa tgatgctttt ttcaatatcc atgctttagc taatggagga acagatgtag
     6001 gagcaattat cacagctgta gatgcacatt ttgcaaatat gcctcaagtt aactggatga
     6061 tagcagggga ttttaaccgt gatccttcta ctataacaag tacagtggat agagaattag
     6121 caaatagaat tagagtggtt tttccaacta gcgcaactca agcaagcgga gggactcttg
     6181 attatgcaat tacaggaaat tcaaatagac aacaaaccta tactccaccg cttttagctg
     6241 caattttaat gcttgcaagt ttaagatctc atatagtttc agatcatttt ccagtaaatt
     6301 ttagaaaatt ttaggacatt taatatgaaa aaaattatta ctttgttttt tatatttata
     6361 actttagcct ttgcaactcc tactggagat ttgaaagatt ttaccgaaat ggtttctata
     6421 agaagcttag aaacgggaat ttttttaagc gcctttaggg atacctcaaa agatcctatt
     6481 gatcaaaatt ggaatattaa agaaattgtt ttaagcgatg agttaaaaca aaaagataaa
     6541 ttagctgatg aacttccttt tggttatgtg caatttacaa atccaaaaga aagcgatctt
     6601 tgtttagcca tcttagaaga tggaaccttt ggagcaaaat cttgtcaaga tgatctaaaa
     6661 gatggtaaat tagaaactgt attttctata atgccaacaa caacttcagc tgtgcaaatt
     6721 cgttctttag ttttggaatc tgatgaatgt atagtaactt tttttaatcc aaatattcct
     6781 atacaaaaac gctttggaat agccccttgc accctagatc ctattttttt tgctgaagta
     6841 aatgaactaa tgattataac cccaccttta acagctgcta cccctttaga ataagatttt
     6901 tatcttgttc tatttttata tttatttaat atttatgata ttactaaaat acacaaaata
     6961 attaataata atacaatgta atttacctta ctctataatt cttttatttt aatttaattt
     7021 tttgttacaa taaatttata cataataatt atcaaggagg aaaaattgga acaaatttta
     7081 acatggcaac aaatttatga ccctttttca aacatttggc taagtgcttt agtggcattt
     7141 ttacctatac tatgtttttt agtttgtttg gttgttttaa aacttaaagg ctatcaagca
     7201 ggttttttaa ctgttatact tgctacttta gtagctttat ttgcctataa aatgccttgg
     7261 aatttagtgg gtgcaagttt tattcaaggc tttacaaatg gtatgtggcc tatagcttgg
     7321 attatcatcg cggcaatctt tctttacaaa ctttctatca agtcaggttc ttttgaaatc
     7381 attaaaaaaa gcgtgatgag cattactcca gatcatagaa ttcaagtgat tttaataggt
     7441 ttttgttttg gttcattttt agagggtgct ataggttttg gtggccctgt ggctataacc
     7501 gctgcacttt tagtaggact tggcttgcgt cctttacaag ctgcagggct ttgtcttatc
     7561 gcaaataccg ctcctgttgc ttttggtgcg gtgggaattc ctattattgc tatggcaaat
     7621 cttgtcggca tagaacagca ttcagtttct gccatggtag gtagaatgct agttccttta
     7681 agccttacta tacctttttt catagttttt ttaatggatg gatttaaagg tattaaagaa
     7741 acttttccag ctattttagt tgcggcgcta agttttacaa ctactcaatt tttaagctca
     7801 aatcacctag gagcggaatt acctgatatt atttcagctg tggtttcttt agcagttacg
     7861 actgtatttt tgaaattttg gaaaccaaaa aatattttta gatttgacaa tgaaagcaat
     7921 ttcactcaag ataacacctt aagttttaat caaattttaa aagcttggtc accttttatt
     7981 ttactcattg tttgtattat catttggaca caaccttggt ttaaagccct ctttgacaag
     8041 gacggaattt taagctatac aagtattact ttacaattta gcaatatcac aactggaatt
     8101 ttaagccctt ctatcacagg cataggagaa gctaagcctt tatctttggc cttgggtgta
     8161 gatttaatca atggaaaaac cgtagctcaa gcaggaacag cgattttact tgccgctttt
     8221 ctaactatag ctattttaaa aatcaaagcc gaagatgctg cagaatgctt ttgggttacc
     8281 ttaaaagaaa tggctatacc ttgtatcacc ataggtttgg ttgtggcctt tgcttttatc
     8341 tctaaaaata gtggtatgag cactacttta ggacttgctt ttgcacacac aggtgatgct
     8401 ttttctttct tttcaccaat cattggctgg ataggggtat ttttaacagg ctctgataca
     8461 agtgctaatt tactttttgg aaccttgcaa caagtaagcg ctcaaaaact aggtattagc
     8521 gaagctttat ttttagcagc taattcagta ggtggggttg ttggaaagat gatcagtcca
     8581 caaagcattg ctatagcttg tgcagcggtt ggacttgtgg gaaaagaatc tgatcttttc
     8641 aaattcacat taaaatattc tgtagctttt attgttttaa taggaatttg gacttgcatt
     8701 atagcttttt tcttacaagg aatcatccct gaagttatag tgaaataatt aaaaatttaa
     8761 gttttatttc aacaaatatt catttttaga atatttgttg gaaattttac tttgctttta
     8821 tttttacagg attagaatat ttatcctaaa ttatcccaaa aggagagatg atgaaaaagg
     8881 tgtattttta cgccacatgc ttaggaactg ctgctatgca acaaagcgtt ttaaatgcaa
     8941 taaaactttt aaggcgtgaa ggtattgaag tgatttttaa aaaaaatcaa acctgttgtg
     9001 ctcaaccttc ttttaactca ggttatttcg atgaaagtcg tgagattgct ttatataatg
     9061 tagatttatt tgataaagat tatcccatcg ttgtgccaag tggttcttgt gcgggtatga
     9121 tgagtcatga ctataaagaa ctttttaaaa acagacctga attttctaaa gtcaaagatt
     9181 ttagctctag ggttatagaa ctttcacaat accttgatga agttttaaaa gtagattatg
     9241 aagataaagg tgcacctata aaagtaactt ggcattctaa ttgccatgct ttaagagtgc
     9301 aaaaaagcat acaagcaagc aagaatctta tcaaaaaact aaaaaatgta gaattagtag
     9361 aacttcaata cgaagaagaa tgttgtggtt ttggcggaac tttttcagta aaagagcctg
     9421 aaatttcaaa tgctatggta agaagtaaaa ttaaagatat acaaaatagc ggtgcaaaat
     9481 atctcatcag tggcgatgga ggttgtcttt taaatataga tggtacaatg aaaagaatgg
     9541 gtttagatat aaaaggcata catttatatg actttttact taaacgctta gaaggagaaa
     9601 gactatgagt caaaaaattc ctcacgaaca aatcgttcaa attaaactca atgacaaaca
     9661 aatgcaagaa aatttaatga ctgccatgca tactttacaa aaaaatagac tcaatgttat
     9721 tgatgctaga tttaaagact ggcagggttt aagatctaaa gctaaacaag ctaaaaacaa
     9781 tgccttaatg agtttagaag aaaggctttt agaatttgaa aaaaatgcta caaaaaatgg
     9841 cattaaagtg cattgggcaa gtagtgatga agatgcctgt gaaatcgtct atgaaatcat
     9901 gaaagaaaaa aatatcacca agcttttaaa aggtaaatct atggcaagcg aagaaatagg
     9961 cctaaatcac tacctagaaa aaaaagggtt aaaagctata gaaaccgatc ttggagagct
    10021 tattttgcaa cttaacgaag agcctccttt acatatagtt gtacctgcca tacatagaaa
    10081 ccgtcatgaa atcggagaaa ttttcaaaga aaaattagga gcaaatttag aaaacgatga
    10141 acctgaaagt ttaaatgcgg tagctagaga acatttaaga aaagattttg aaggcttaaa
    10201 acttggactt agtggggtca attttgccat gtcaagagaa ggggcttttt ggcttataga
    10261 aaatgaagga aacggtagaa tgtgcactac agcacctgat attcatatcg cactttgcgg
    10321 catagaaaaa gtcatggaaa gctttgaaga tgcggctact atggtttctt tgctcactcc
    10381 ttcagccaca ggacaattta taccaactta taacaatatc attacaggcc ctagaaaaaa
    10441 tggggattta gatggcccta aagaagtaca tgtgatttta tttgatcaca atcgctctaa
    10501 aatgttagct catgaggatt attatgaggc tttgcgttgt attcgatgtg gggcttgtat
    10561 gaatttttgc cctgtttatg atcaaatcgg cggacatgcc tatcaaacca cttatccagg
    10621 acctatagga gaagtaatca gtcctaatat ttttggtata gatcatacag gagatatttt
    10681 gaatttctgt tcactttgcg ggcgttgttc tgaagtttgt ccagtgcaaa ttcctttggc
    10741 tgatcttatt cgcaaattaa gatgcgataa aataggacaa ggtaaaaatc cacctttagg
    10801 agcaaacaat gttcatcaca atgccctaga agcctttgct tttaaacaat ttaaaaatat
    10861 cgcaaccaat ggagataaat ggcgtttttc actttcaaaa gcacattatt tcaactgggc
    10921 agtgcaaaat ttcgcaagcg ttttgcctgt gattaaaaaa tggtacgctt ttaaagaatt
    10981 acctcaaatt aaaatggatc tttataaaga agtgcaaaaa ctagaaggag taagctatga
    11041 gtaaaatcga tgaaatttca agcaaaagta aagcaagtat tttagaacat cttaaaaaag
    11101 cttacaaaga aacagacttt acgcgtattg aaagtataga tcctgtagaa catatccaaa
    11161 ccacccaaga tatgcttgca gaaatgaagc aaaaaatgag cgataacaaa tacatcgttg
    11221 aaaatgcgac taaagatacc ttagaagaaa aaatcaatga aattgtcgca agatatggct
    11281 ttaaaagtat gatttatgga gcggatttaa atttaaattt agaacaaatc aaagcagaaa
    11341 aaaagatttg ctttgataaa gaaatcgaaa atttaagatc tgaagttttt catagtgatt
    11401 tttccatcat tcacgcaaga gcaggggtaa gctctcacgg agttgcactt ataccttcaa
    11461 gtaaaaccca acctagaatg ctaagccttg cacctaaact ttgcatagta ttgcttaaaa
    11521 aagaaaatgt tgttaaaagt cttagcgaag ctttaaattt agtaaaaaaa gaaaatgaaa
    11581 ttttacctac taatatctta tttatagcag ggccttcaag aacagcagat atagaactta
    11641 tcactgtttt tggtgttcat gggccacaaa ttgcacatat tattatttac tgattctata
    11701 ctagaatcag taagtcttaa tttttaatat taattatata tattttttat attatacaaa
    11761 tataaataaa ataaataatt tctaattaat aatattttaa taaaatatta tgtaatattt
    11821 cactcaaata tattaaatta atttttaaat acaaaaatta aagaaggtgc ttttagataa
    11881 actaattcca acttggaatg aaaatacagt attcatgaca caatgattga cattcaacac
    11941 caaaaacttt gtgaacttgc aagcaaggtt gaaagtgctg tttataaatt tgtaaaacga
    12001 gaagaactca aagaaatttt aacagaactt tttaactata tgaaagaaca ttttagtaat
    12061 gaagaagatt atatgcaaga aattcattat ccttatttaa atgaacacaa aatcatgcat
    12121 aaaatatcat tcgtgatatg tcttatctta tacaaaacat aaaaaccact aatgatttaa
    12181 aagagaagct ttacacagtt tctaaaaaat ggcttttaga acatatactc tataaagatg
    12241 tgaaagttga acaatacaga agatcttctt taacttctga agatgatggg ggaagtaagc
    12301 tttgaagaag tcaaagaaga aaaagatgat gaaaatacag tttatcttta tacatgcgaa
    12361 tgcgtagaac aaatgcatga tgtaccattt ggaattcatc aaaaaattca acttaagggc
    12421 gtaaaattta aatgtaaaaa atgcaaagaa gccatacagt tttataaaaa atattcagaa
    12481 aatttctaat taactattta tgcgttaaaa taataaataa agtataagtt agacaaagaa
    12541 ggaaatttaa ggataaaaaa ataaaatatt ttattttgga taaatttgac tattcctatc
    12601 ctatgctaac caaagataca aaatgctcat tttgtgaaaa ttttttctcg atagaatata
    12661 gctcaaactt aaaaacaata gaaaaagaat gtccattttg caataataaa atggacatta
    12721 agcttaaaga ctaagcctta gttttactta caatattaat aatatttgaa gctacttcat
    12781 cagcaagttc taaatgagaa gtaaaaccta cacaagaaca attaatctcg cctaaaacat
    12841 atttatcatt gcccttttca tcagtatcta aaataaaatc agccgtccaa atcaatggta
    12901 agtcgtaatt gcctaatttt tcccttacct taggaagctc gcctaaaaac atatccacca
    12961 aagttttcca atcttctggc ttatcatagc gatattttgc cccactaaaa agcgtagcag
    13021 aaaaagcatc agcatcttcg gctggttttt tatgcactac atttacaggg gtgttataaa
    13081 gcattaaaag tctgatttca ccttctttaa tgcgcggtaa aaaagtcata tccacaagca
    13141 taccattatc acctatgata tattgctcgc aaaaatccat aaattcccca agctctctat
    13201 gttctacatg attatcctta gcttcagcac atttgatttt tgtgtttaaa ggcaaactat
    13261 ctccactaac attaccctct acactcacac gccaaattcc ctctcctgta gagccacgat
    13321 tttgttttaa aaccctttca cctttagcca aactttttgg aaaattttct ttaaaagtct
    13381 taatatcata gtaagcataa gtatcgcttg gaacaagatc agtatctgct aattttgtaa
    13441 gtgcatcttt agcaccataa cctatcatag catcaggatg aggcatgcct acaagcttat
    13501 cggcacaaag ttttcttaac atatcaaaat actcattttc ttctttaaga ttgccaggat
    13561 tgatgcgaga aacataacca tcaaaatttt ctttcacata tttgtaaatt tcatcttttt
    13621 tacccacttc aaaaaaaatc acctcagcat tccaaccctt agcttttaag gcatttacca
    13681 taggcatggt atcttttcta tagccatctt cacctttatc actcccacct ttaacttcga
    13741 aaaaaacaat attttttttc attattttac tccttatcta agatataaat aattattgca
    13801 taaaaatatt acaaaaatta aataaaaata tttatatatt ttatctagcg tttataaaac
    13861 tgctattagt tttataagcg atttcgatta agcttttact tatcaagctt gatgtttgtc
    13921 cttctaggcg gttaagaaat ttatcaatct tatcttcttc tttccaaaca ggatttgaaa
    13981 cattagcaag tttttcaagc tcctttttag cattttcata attactaagc tcatctataa
    14041 gaccaagctc cttagccttg gcagctaaaa acactcttgc atttgcccat tgatcttttt
    14101 tattaagatc taatgctctt tccttggcaa caaaacctgt aaaaagatca taactttgat
    14161 caattaaacc ctgtaaaaaa tttctttcat tctcattcca agctcttgca aaagttccag
    14221 cacttttaaa ttcacccgct tgaatagttt gttctttaat accgagttta ttagccaatc
    14281 cgcttaaatc agctccttgc ataatcacac cgatagagcc tataaaactt gctggattgg
    14341 ctaaaatttt attagctcca actcctgcta aataacttcc gcttgccata gttccgcttg
    14401 cataaacaag cacaggcttt ttaattttta aatcctttat agctagagct agttccatac
    14461 taggagcaaa agctccacca ggagagtcta taacaaaaag cactccttta atattgctat
    14521 catttttagc attgataatt ttttccaaaa ccgcagagct gtcaaaaatt tcacccttta
    14581 aatcaatgcg ttctaaattt gcaagattgg agcttgaatt tgcactaggc attaaaatcc
    14641 atataacaat caacaataaa acaaaggttt taaaataagt attgataaat tttataccgc
    14701 atcctaaagc cttaaaaaat gattttaaaa tttgcattct tttcctttta taaataattt
    14761 atctacttcc ttagcattta aaataaactg caaaggagct tgctttttat cacattctcc
    14821 tagctcaaat acgttaaaat cagcaatttt acctttttta agctctccta aatttaaatt
    14881 taaagccctt gcaggataaa gtgttaccat ttgcaaaagc ttagaggcta actctaataa
    14941 atcaaaattc ttatgtataa gcaaattcgc gcgcatttca tcaagtaaag acaatgaaat
    15001 atttgagcta agtccatcgg ttcctaaatg aatatttaat ccacttttta aagccgtttt
    15061 taaatctaag cttttttgac ttaaaaggcg atttgaaaat gcacaatgtg taatagaatg
    15121 taaattttta tctaaccatt catattcttt tagataaaca caatgcgtaa aaagagtcct
    15181 tactccttta aaaagtttaa caaaatcctt tggtgtataa agaggcttag gatgaagtgt
    15241 gaaattttca agccattttt taaaactccc tttagactct ctaagccaga tattttcagc
    15301 cttactttct aaaaaatgcg tactaactag taaattttgc tttttagcta aatcaagagc
    15361 aaaatgagcc aaactaggat gagttgaata aggagaatga atcgaaattg ccgggataaa
    15421 aaaatcattt ttaaatttca aagaattttc aaatcttttt aaaaattctt gttttttatc
    15481 ttcaacttga ttttcatttg tacccaaaat ttcattaaaa aatactatac gcataccctt
    15541 gtgactagcc tttaagcaag gatctaaatc actcccaaaa cttgaaattt cacctatagt
    15601 gcctataccg cttttttgca tttttttaat gctttgaagt attaattctt ctttggcctg
    15661 tgcatttaac atggaacgag aatttataac acttttaagc caaattaaaa attctccaaa
    15721 atgtaaagtt gttgaatttg cactaaattc taagtgtgtg tgaggattta taaaagcagg
    15781 taaaataacc gaatttttag gtgttttgat gattttagcc ttgggatatt tttttcttaa
    15841 attatccaat tcacccaatt ctaaaatttt atcttcaaaa acaaaggctt gattttctag
    15901 tatcgtaaaa tcttcatcgc ataaaaaaag atatcttgca gtaactataa acacgatttt
    15961 cctttcaaaa attacattgt agcaaaaatt tatttttaaa atgttataat aaaaggttaa
    16021 aaataaattt ttaaggttaa atccatgaaa ataatgatta tccaaggccc aaatgttaat
    16081 atgcttggcg taagagaagt gggaatttat ggtgctatga aaatggaaga aattcatgag
    16141 caaatgaaac ttgcagcatc tcaaaacaat gtagaacttg actttttcca aagtaatttt
    16201 gaaggtgaaa tcgtagataa aattcaagaa tgtcttggaa cagttgatgg aattattatc
    16261 aacgcagcag gctatactca tacttcagta gctattcgcg atgctattgc agcagtagct
    16321 ttgcctacaa ttgaagtaca tattagcaat gtttatcgca gagaagaatt tcgtcaaaaa
    16381 agtcttatag cgcctgtatg ttctggaact attgttggtt ttggtccttt tggctatcac
    16441 ttggctttaa tgggtataat tcaaatttgc gaacaaataa aaaatttgcg tgcgatgcaa
    16501 caagcacaac aaacgaataa ataataatgc taaaaattca aggagtaaaa cactttgaaa
    16561 aaagtcgttt ttttcctttt tttagtcaaa atatacgatc ttttaaatat ttagctctta
    16621 taggcttagg aagcaatata gagcccgaaa aaaaaagatt tgatatgctt tttcgagtaa
    16681 tgatggatga taaaagattt aaaattttat ccacatctcc tatgttgata aatgaagcct
    16741 ttggttttaa agagcaaaaa gattttacca atgctgttat gttgatacaa actaatttgc
    16801 atgcacgagc acttttgaaa gttttacttt attatgaagt aaaatttaaa cgcaagagaa
    16861 ctttcaaaaa cgctcctaga acgcttgatt tagatctttt atacttttca caaaaagtca
    16921 agcgtgataa gtggtgtgag gtgcctcata aaggggctaa agaaagagtg agtgtaattt
    16981 tgcctttagg catgatataa ggaatataaa tgggacaact tatacatact tttaccgttg
    17041 aagatacaga acaaattata cccaaagtaa aagaagatta cggagataaa gctttaatta
    17101 taacaaataa acaaattcgt cctaaaacct taaatcgcag tgcgctttat gaggttatgg
    17161 tagccataga agaaagcgac tatgaagaac acttaaaaaa acaaggaaaa tctttacctg
    17221 caaaaaaaag ctcgccaaaa ccatcctcta cctctcttgc agaagaaaaa attagatctc
    17281 aaatccctca agaagatgaa gatgtagtct tggatttctc aaacactcgc ttaaatacaa
    17341 atttaaacac tgtaaaaaac aatgacttag ctaaaaaaac ctatcaagat tttccacaaa
    17401 acaaaatcaa ccctcatcaa aataagactc taggctttga tgatttcaaa gaaaaactaa
    17461 gtgaagttag caatgaaatt tctaaagtca caaacacacc tttagaaaat tacaccccta
    17521 atccaaatta taataaaaaa atagaaaatt ttgaaaagca atttgaaaaa caaatcaaca
    17581 agcttaatga taaaatagat cttcttgcag atatgatgtg ggacgataaa gctgaagcta
    17641 gaaaaaatct tatgatacct cctgaatttg caagtattta taaacaagcc aaagaaagtg
    17701 gaatgcttga aaatcatcta gaagcgatta tgaaagcaac tatagaaaat atgccagctg
    17761 ctatgaaaac caacaaagat gcggttcaaa gatattttca ctcactttta agaaatatct
    17821 tgccttgtcg tgttgaaagc gatataaaaa aacaaaaaat catgatgcta gtaggcccaa
    17881 caggagtcgg aaaaacaaca accttagcta agttagcttt tcgctatgct tatggagata
    17941 agcgttataa aacaggtatt attacgcttg atacttatag aatcggtgca gttgagcaac
    18001 tttttcagta tgcaaaaatg atgaaacttc ctattattga tagcatagaa ccaaaggatt
    18061 tagatgaagc gataaaaagc ttaaataatt gcgaagtaat tttagttgat actataggaa
    18121 attcacaata cgatcaaagc aaacttgcta aaactaaaga atttttaatg cactcaaatg
    18181 cagaaattga tgtaaattta gtggtttctg caaacaccaa acatgaagat ttaatggaaa
    18241 tttataaaaa tttttcattc ttaaatattg atactttgat tattactaaa tttgatgaaa
    18301 caaaggtttt tggaaatatc ttctctcttg tttatgaaac aaatattcct ctaagctttt
    18361 tctctatagg acaagaagtg ccagatgatt tagaagtagc caatagtgat tttctagttc
    18421 attgtatttt agaagggttt aacaaaggaa aaaataatga ataaccaagc aaataaactt
    18481 cgcaatctca tgagtcaaaa tggaaccaaa aaatcccaaa acactcattt tatagctatt
    18541 acaagtggaa aaggtggcgt tggaaaaagt acgattagcg cgaatctagc caatgtttta
    18601 gcaaataatg gctataaagt tgggcttttt gatgctgata ttggcttggc aaatttggat
    18661 gtcattttaa atgtacgcat acaaaaaaat ctcttgcatg ttttacgcgg agaatgctcc
    18721 ttggaagaca ttttaataga agttaagcca aatttatggc tcatcccagg cgaaagtgga
    18781 gatgagattt taaaatataa tgataaaaat atttacgaga gatttttaaa tcaagcaagt
    18841 attttagatg aacttgattt tcttattatc gacacaggcg cgggtattgg tggaaatatt
    18901 ttaaattttt tagaaatggc tgatgaagtt atagtagtaa ctgttcctga tcctgcagca
    18961 atcactgatg cgtatgcaac cataaaaaca acttctaaga caaaagaaaa tttactaatg
    19021 ctctttaatg ttgtaaaaaa tgaaaatgaa gctttaaaag tttttgaaaa tattaaaaaa
    19081 gttgcagatg caaacattaa aaatccttta aatttagaat tcttaggtca tttaagcgct
    19141 tctaaagatg taagtggtag tattaaaaaa agaactttat ttagcgatga aaacacagcc
    19201 tcaagtgatg agattaaagc cctagcttcc aagcttttat atagattgga acggaaagtg
    19261 cttgataatg tttcaaatcg tagtttttca agttttttta gaaaaattat tgaaagattt
    19321 tagcaataaa gagaagagat tatgaggcca gaaaattacg tagcattttt cactgtttgt
    19381 ggatttttta taggacttgc atttagcatt attagtatag atgaagcctt tgatatactg
    19441 atttttactt gttttattac ttttatgttt tatgtttttg ttcatattgc tattatgaat
    19501 tttatagatg taaagaaaat tagtggcaga atctttaata aacacgatta tgaaaaaact
    19561 agcaataata ttatcaacga tttagttatt cgtgaaaaga aaatggatat aattttagaa
    19621 aagctcaatg aagaaagaga agagctaaag aaaaatgaat tcaaagaaag acgaagaaat
    19681 gctaaaagag ccgcctaaag cttatgcaca aatgctaaag aaagagcaag atgagcttgt
    19741 gctttcttac atgccagctc tgcgtgctat ggcttttaga ctaaaagaac gcttgccttc
    19801 aagtatagat gttaatgatc ttattagcat aggcgttgaa gaaatgataa agctttcacg
    19861 ccgttacgat aaagaacaaa atgataactt ctggggtttt gcaagaaaaa gagttaatgg
    19921 ctctatgctt gattatctta gaagtcttga tgtaatgagt cgaaataatc gtaaaattat
    19981 taaagatatt gatgcaatca tggatgaata ttttttagaa catgaatgcg aacctgatga
    20041 tgagtatcta gccaaaaaac ttgatttaga tgtagaaaaa atcaaagaag taagaacagc
    20101 tcatgctatt agctataccc tgcccattga tgagcaaatc gaactttata atgaagacaa
    20161 tactttagaa aaaattgaaa aagaagaact tttagaaaaa attcacgaag tgctagatga
    20221 tcttaaagag cgcgatcagt taattattca gctttattat tatgaagaat taagcctaaa
    20281 agaaatcagt gaaattttac aaatcagtga aagcagaatt tcacaaattc acaaaaaact
    20341 tcttaaaaaa cttagagaaa ggctagtgta atggctgaga tactctccca agaagaaatt
    20401 gatgctctac ttgaagttgt cgatgataac accgacacac ccatagcctc aaattcaaaa
    20461 gatgaaaaag atgaaagaaa tatcgttgta tatgatttta agcgtcccaa cagagtttca
    20521 aaagaacaac ttaggacgat taaaggcata catgataaat tagcaagaaa tttagcctct
    20581 caaatttcat cgatgatgag aagtattgtt gaaactaaac ttcattcagt cgatcagatg
    20641 acttatggag agtttttaat gtctttgcca agcccaacaa gttttaatgt tttttctatc
    20701 aaacctttag atggaaactg tgttttagaa atcaatccaa gcatagcttt tcctatgata
    20761 gacaggcttt taggtggtca aggcgatagc tatgaagctt cgcgtgagct tacggatatt
    20821 gagcttaatt tacttgattc tattttgcgt atcattatgc aaagacttaa agaaagctgg
    20881 gctaccgtaa ctgaaattta tcctagtata gaagctaaag aatcaagtcc aaatgttgtg
    20941 caaatcgtat ctcaaaatga gattgttatc atggtagtaa tggaaatcat cataggaaat
    21001 tcaagcggaa tggtaaatat ctgctatcct gtagtacatt tagaaagtat attaagccgt
    21061 ttagcaaacc gtgatattat gatgggtgaa acctcagcca aaaaatcacg taacaaagag
    21121 cttaaaactt taatcggtcg tgctgaagtg gtatatgagg caattttagg aaaaacctta
    21181 attaatgttc atgaattttt agaacttaaa caaggcgata ttttaaggct tgatagagaa
    21241 gcagacgata aagctatagt aagtatcgat aaaaaagatg ttttcttagc acaaattgga
    21301 ttgcatcgtt ttagaaaatc tattaaaatt ttagaactta tacgcacaga taaagatgaa
    21361 atcaaagaaa ttttggaaaa atacgaagaa gagcgtaaag ctaaagccag tgtttatgat
    21421 gagcctgaag aggaggatga agaaatatga tcaatgattt tttaaaaatg tttacaaatg
    21481 aatgcatcag caccattgaa ggtttaacag gaaaaagtgc tgaatttagc gaatataaag
    21541 aatttgatgt caatacaagc gatactttaa aagcaccttt agtgtatgct atatttaata
    21601 tagcaaatgg tggaaaaata ggaattttag ctggtgctgt tttaatgagt gctattggtg
    21661 aatggatgat gggtgaagaa gagatcacca aaaacgataa actgggtcct gatgaaatgg
    21721 atgcagctaa agaagccatc caaaatatca tttcagcatt ttctacaacc ttaggagccc
    21781 aaaaagacat tccaaaaatg gattttagca tagaatcttg tgaatttgtg cctgaaagcg
    21841 tagattttaa agattttaaa aaattatttt tatatgatgt aaaaataggc gatttagaag
    21901 aacaagtttc tttagccatg gatcaaacac tccataacat cctaagcggg aaacctgctg
    21961 aaacaggaaa tacaagcact gattctaatc acaatactga agaaaaagcg ataatgctta
    22021 gcgaagagct taaaaatatc aatcttatca tggatgtgcg tttgcctgtt cgtgtgcgta
    22081 taggcaataa aaaaatgctt ttaaaagatg ttttaactat ggatataggt tcagttgtgg
    22141 agcttaatca acttgcaaac gatccgcttg aaattttaat tggggataaa agaattgctt
    22201 atggcgaggt agtaattgtc gatggtaact tcggcgttca aattacagaa attggttcta
    22261 aaaaagaaag attagaacaa ctaagataaa aagttttagc ctacaaatta agaataataa
    22321 atataaacga attaaaacta aaacaaacta aaagggctga aatcaaaatg taaagatttt
    22381 ggagtattta acttaaaagg ttttagctct tttttaggag caacaattaa agcataacca
    22441 cctttattat atctatccca aatactaaaa aattgacttt tagaacttat atattctcca
    22501 tgacttggat caagcacttg taaataatta cctttatgat tgataattat aacaaaatgt
    22561 ggaaagcgtg gatcatcttc aatttttaca agcattggaa tatttacaag tttatccaag
    22621 ttttctctat tgatttgata tgaattgctt tcatagccta gttttttaac tgcatcgctt
    22681 aaatctgcaa agcttaccat atccgtataa agttcctgtc cactcataat ctttaaaagt
    22741 tcaagttcat caaacttttt atcatcaagt atattgagta aagttgccaa agatgaagcc
    22801 ccacaagatt gctcgtaagt ttgccttatt actctttcgt ttttaatttc ttgataggat
    22861 ttaactaccc attccgcttt tgcactcaaa gtaagaatgg gtaaaaataa taaaattttt
    22921 agaatttttt ccataagctt atcccaaata tgctatcagg agaagcagag cttcctccaa
    22981 aactagcatt aacagaaact gcggtatctg aattaatgct ataagtagaa cctaaactta
    23041 aagttggaat agaacgcact tcagaatttt gataaccatt aattttttgc tcggtttgaa
    23101 atctttgctc tgctcctaaa tctaaagtaa ttttaggact tagaataata gataaatccc
    23161 cacccacata aatactattt ccatactcta ttttaagggt tttaaatttt cttgattggt
    23221 tataaccaaa gccggtataa atgctatata caacaggatc gctatatccc cttagactag
    23281 cttgtaagct ttgtgatttt aggtaaaagt ttttggtttg attgactgct ttttctcttt
    23341 gaacgactgc agcttgaaag gtaatttgtg gaattaaatc tgcaatgcta tcgcctgtat
    23401 aaataaaacc tagtcataaa ctatcaaaac ctattctgtt tttactagaa tactcatttg
    23461 taaaaaagtt tgtatattct tgtcttgcat aacttccgcc ccctgaaata agtatgtcaa
    23521 acttaggtgt tatggtataa atgaaagttt gagttaaaaa cacttgcttt gtatcattcc
    23581 aaattgtagg atctccgcct attgttatat taggataaag agaatacgag tttgcatttc
    23641 ctgtgctaag taaagaaaag cttgtaatac ttcttaaacc tatttgcttt ttaaacaaac
    23701 tgtctatatt tagttcatca ctagcaaaaa cacaactgac taaaaccata aatgttaaat
    23761 aaatcttttt cattgttacc tttctaaata ttttaaaaaa tttttttaaa gcaatgaatg
    23821 ttccaaataa aaaaatttga ttttaatata taatttatga tattattcaa ataaagagta
    23881 aaatagttaa gaaaaggaga attatatgtt aaaaaaatta gtaaattgtt taattttggg
    23941 ttctttattt acaagttctg cttttgctgg ggatttttta gctaaggtta gtaatggtgc
    24001 tttaagtgat aattctcaag gagttaaggc tcttaattta gatgagatga aacaagttaa
    24061 gggtggatat caagttctta caagcaaact tggaaattct gaatatatag cattagctat
    24121 tccagataat acaacaacat ataaacagtt ggtagccatt tataccgtaa ctggcgataa
    24181 cactttttca aatacatttt taggttatac agtaaaaaga aatatcgcaa tatcaagctc
    24241 gggaaaacct tatgttcttt ttaactatgg tgttgcacta cttgatagac aaacggggtt
    24301 gcatagagtt aattcgagtg agattttaaa taataatcag gttattaaag aattaactat
    24361 gaaatataaa actcaatttg aaagtaatct tggtggctgg actgctagag ctagaagata
    24421 aaaaacttat gaaaaaatca tttttgccga tttatcttat aaataaaact ttacttacag
    24481 gaaggtaaaa atgattaatg gtataaattc ttattcaagc tacaattaca caaatacttt
    24541 tagtaataat acttcaaata taaaatcatc taatgttgca aatgataact caagccttgt
    24601 aagcgataaa tctagggcag taagtaaaat gctaggatat ggcgtagata aagatggctt
    24661 ttttacaagc gattttaacg aagctgcagg cttaccaaaa gattataaga tttatgctaa
    24721 agatatagaa aattttgtta atattcaaac aaaaagtcta ttatcaagtt gtattaatat
    24781 tgatatagca aaaagtatag gaaatgctta taaagtattt tcacaacttt taaatgatga
    24841 gttaaacaat aaaatcaatt ttacaaaaga agacttagta aaaataccac aaggtttcga
    24901 atttaatcaa aatactttgg agataaataa aaaatataat ttaaatgata aagagtataa
    24961 agattttatg tctaattatc aaaattactc tccgacttcc cataatataa aaataatgac
    25021 ttttttctca cttgatgata aaagtgatat ttttaaatat tctttaatag atcctactcc
    25081 ttatagtaat aatgataaaa ctataacaaa aagtggtatt tttatgactt tctttactgg
    25141 atttcaagca aaaaactatt ttatcgaagg acaaacaagt attttaggca aaatgcaagg
    25201 atttgataaa actatgagtc aaagtgaaat tgataattta aacaaattca taagtgaaaa
    25261 tagtatgaat tttaaaggag atatttttaa gctttttgat ttattaaatt cagatatgag
    25321 cattgatgat tttaaacaaa aaatactaga acaaaaagaa aatttaaaca atcctacaaa
    25381 aaatacaaat aacaaagaaa cttcagaaga agacaaaaaa aagccattta aacctataca
    25441 agcgcaaagt tcaagcgaaa cctataaaga tgataataaa atgaatgagc ttttaaaaaa
    25501 gctactggaa aataaatttg gcacaagcga tgagttagaa cttctttttg gtatgaaatt
    25561 tagtgatgat aacacaggag aatttaacaa aattatttct caaaatactg cacaaaaaag
    25621 tatagatatt aaagcttaag gatttaaaag tctttaaatt cctaatctta ataaaataaa
    25681 cctattaaaa cttatataat aaagaactta ttataaattt ttagctagaa tggaatttat
    25741 tctaactaaa ggttgaaaaa tgaatgaaaa aataagccaa gatttagaaa aatttgctaa
    25801 cataccaaac ctaaaaaatg ccgtaacttt ttttggttca gcaaggctta aagaagataa
    25861 tttttattat cagcaggcta aaattttggc acaaaaatgt gttcaaaatg gtttttgtgt
    25921 gataagtggt ggaggtggtg gtattatgcg tgcagccaac gaaggtgctt tttcacaaaa
    25981 aaataataca aattcaatga gttctgtagg gtttaatata tttttacctc acgagcaaaa
    26041 acttaatgat tttgtagaat ataatattac ttttgagagc ttagccatac gcaaaatggc
    26101 tcttattgaa aagagtctag cttttgtgat cttcccaggc ggctttggaa cacttgatga
    26161 attgtgtgaa attcttacat taaaacaatt agaatttaaa aaagatgttc ctattatttt
    26221 gtttgggagt gaattttggc gaggttttga tgagttcgtc agaaattctt tactcaaact
    26281 tgaagtgatt tctaaaggag atgagttaaa gtataaaatc actgacgact tggattttat
    26341 aattaatact ttaaaggaaa tttaatgaaa attctagtcg ctatgagcgg tggagttgat
    26401 agtacagtca ctgcttacaa acttaaaaat ttaggtcatg aagttatagg ttgttatatg
    26461 aaacttcatg gcaaaccaaa ttatcacgaa gaaaatatca aaaaagtaga aaaagttgca
    26521 aactttttgc aaattcctta tcatatttta gacttacaag aagattttaa aaacaaagtt
    26581 tacatgcctt ttgtggatac ttataaagag ggtaaaacac caaatccttg cgctttatgt
    26641 aaccgtttta tcaaacttgg aaaactttta gaatttgcta aaagtttagg ttgtgaaaaa
    26701 cttgccacag ggcattatgc aagacttgaa aacaacttaa taaaaaccgc agtagatgaa
    26761 agcaaggatc aaagctattt tttggccagt gcagataaag aagctttaaa atatcttatt
    26821 tttccgctag gcgaaataaa aaaagaagat gtgaaaaaat ttgcttccac tatagaggtt
    26881 ttaaaatctt ttgccaccca aaaggaaagt tctgaaattt gctttgttga agatacttat
    26941 gtgcaagttt tagatcagtt tatggataca aaaattcctg gagaagtatt agatagtagc
    27001 ggaaaagtag taggcaaaca tgagggctat atgcactata ccataggcaa aagaagaggt
    27061 tttgaagtgc gtggagcaca tgagccacat tttgttttaa aaatcaatcc taagcaaaat
    27121 caaatcatcg taggaacaaa agaagagctt aaaatcagtg aatttaacct aaaaaatatc
    27181 aatcttttta tagacgctaa agagcttgat tgcgaagtaa aaatccgcta tcgttcaaaa
    27241 tccacacctt gcaaggtaga aatttatgaa gataaaagtg caaaaatcat cctaaaagat
    27301 cctgtttatg ggcttgctag cggacaaatg gcagtctttt atgatcatga taaagtcata
    27361 gcaagtggtt ttatagaata atttctagga attaattcct agaaattatt aataaaatcc
    27421 taaaattttc cactaaacaa gcccaacagc tatcatcact actatatcaa ctatggaaat
    27481 cacaaaacct gtactccacc attttttaag agttacacag cctgttccaa aaataacagg
    27541 agctgttcct attgcatagt gagttaatgc catcataaca ttacctgaag ctatcataat
    27601 aaaagcataa aaaagtggtg gtgctcctaa ggcaagctgc actataaaaa acaaaaaaca
    27661 ttgctgatat atgagctgta atggaagcaa agaaatagtg tgtatataaa aaaagcaagg
    27721 cttaaaaata tcataataga aatttcccca agtcccatag cagaagcaaa ttcaccttaa
    27781 gcttcagcta aaaactgtgt aacgccaagt ttgccaagta aagttgccat cattacaaga
    27841 gctgaaaacc atactaaagt attccaagca gctttttcag ccaaaacttc cccaaaagtt
    27901 aaaactccac taatcaacac caaagacaac ccaagcaaag ccacactagt cgcatcaaga
    27961 gaaattccaa aaaaacaagc ccaaagctcc agcccataaa agtaaaagcg agacaaaaac
    28021 actgagaatg attttttcac tatttttcat ttttacaagt tcttttaatt tatctttagc
    28081 aaaagtagaa gcattaggcg tggatttaat ttctagcgga gagagaaaat aaagcaccaa
    28141 aggatttgga gctgtagctg taataaacat agctgatgaa ataggattgg ctcttgataa
    28201 tttaccaaag aaagataagt gcctatttta ttttgtgttc catcttcagg agtggattta
    28261 aaacttcttg caataacttg aactatagga tttatgatag cccctgctct tgcagtattt
    28321 gaaggagtaa ctggagctaa aatagtttca caaaaagcta tagaataagc aatacctaag
    28381 gtttttttac caagaatact gataaaatga taagccaaat gctctccaag tcctgtttta
    28441 ataactccac gagccacaat aatagaataa ctataagcta aataagagaa tttgaaaaac
    28501 cacttaaagc gtcttttata cccgttttag attttaaatt tgatatagca gtatttacct
    28561 tttcatctta tactcttttg atataaaaaa tcaagtactg aagtatttaa aggaaatttt
    28621 agtctcatca ataagttgtt gcgtagaagt tttcgaagta gctttggtgt aaattttact
    28681 tagattttca attgggtagt ggtaatgcca ctaagagcta ctatggcaat agctatcata
    28741 caaacaggcc ccaaaggcat tacttgtaaa atcactgcca taatcacagc aataaaaagc
    28801 ccaagaaaat gccaagaatt atcttccaaa cctacaagga gtaggtatag gccaaaacac
    28861 agctgcaata aaatacgcag caccaacaag ggaattttct ttctatccat tgtttatctt
    28921 ttgatattgg taatgaaatt ctagttaact aatattttaa taaatcttaa aattataatt
    28981 tttaaataaa tttttaattt ataaaaaagc tagcctgatt gaaaaataaa tagggaattt
    29041 taaaatgaat aaaacccttc cccagataac tgcggcacac actaaaatca agtgctctgc
    29101 tgtgttccca ccctgaagcg gtgcttaaaa atagcattgc acaggtctaa gaaaaggctc
    29161 taaaattata tcacaatata cttaaaaagc cttgagaatt ataaaactaa aaaaataata
    29221 tataaataat aaattggtta aaattttata cattttttaa aatttattta taaaaactat
    29281 tattttattc tctaaaaata cgatataaaa ataatttata tcgcaaggaa aaaatatgaa
    29341 agt
//
LOCUS       DARATF010000007        26537 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.007, whole genome shotgun sequence.
ACCESSION   DARATF010000007 DARATF010000000
VERSION     DARATF010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26537
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.007"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..2394)
                     /locus_tag="SB502_000255"
     CDS             complement(<1..2394)
                     /locus_tag="SB502_000255"
                     /inference="COORDINATES: protein
                     motif:HMM:NF016908.1,HMM:NF024398.1,HMM:NF024914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEG0433748.1"
                     /translation="MNSNDIVLLKCGEVSYKIYLPNRNIDYIQKKIYNELIPYEYEML
                     QDFLKKAKKNTIIVDIGANIGNHSLYLAAHGFDVCAFEANQTLCDIFKISIKLNGFKN
                     LKLYEFGLSDKKEMAVLDNLNPENLGGQSLKIEDFGNIFLHPLDDIKFEKDISIIKID
                     VEGMETKVLNGAINTIKKYRPLLYIEAINSIEFKRINVILEKLDYVYWNTFNATPTHL
                     YYPKERLEYKDILSNVSYHNALESYRITQSLNYSKKLSVEISKIIEITSKNNIELYTR
                     INDLEVQKAKLNKEKCQFEQDLKVCKEKLKQKDSELKRIENTLSYRIGNRIVKSKNIK
                     DILILPYNLFKEYRNFKLRQKNKNLLFQEKNKFKRNIEFRKNQIFECKIENLDLLKIA
                     CIMDEFTYESFKYECDLLQLSLENWKNEIMHFKPSLLFIESAWQGKNSLWKLKISGFS
                     IELQELIGYCKENHIPTIFWNKEDPVHFNTFLPIACSVDFIFTTDIDCVSKYKFYAGH
                     EDVYCLPFAAQTKMYNPIEEFDRKDEFNFAGSYYLRYPQRQLDFDNLINAIKPYKNIS
                     IYDRNFNNPHSHYTFPNCYKDMIIGNLPFNEIVKAYKGYKFGITINTVKQSQTMFARR
                     AFELIACNTFVVSNFSRALRNFFGDLVISSDNVNELKDKLKLACEDEMYCKKIKLNAL
                     RKVMKEHTYTDRLKFIASVVYKKQFEYKYKFYLLVYVNSQEEYIKALDIFNFQKENKE
                     ACLLIYSDKELDFQNNDKYIHISELEELYEYVKNDKQAYFGMLDIRDFYGENYLLDLV
                     "
     gene            complement(2414..3637)
                     /gene="wecC"
                     /locus_tag="SB502_000256"
     CDS             complement(2414..3637)
                     /gene="wecC"
                     /locus_tag="SB502_000256"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HEG0433749.1"
                     /translation="MNQFNKVCVIGLGYIGLPTAAIFASRKIKVIGVDINQNIVDIIN
                     KGKIHIVEPGLDILVHMVVNDGYLKATTLPEEADAFIIAVPTPFKGDNHEPNLDYIEM
                     ASKAIAKVLKKGNLVILESTSPVGTTEQMAKWLAEERSDLSFPHQCGEVSDIKIAHCP
                     ERVLPGQVIRELVENDRIIGGMTQKCAEYAIRLYKIFVQGECIMTNARTAEMTKLTEN
                     SFRDLNIAFANELSILCDKLDINVWELIKLANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VYQNPNEAKIIKTAREVNDNKPNFVVQKIKKKIKDILGPKIACLGLAFKPDIDDLRES
                     PALDIVIKLASENASQILVVEPNIKQLPLKLQNKRNIKLVCLSQALDEADVVAVLVRH
                     KEFIEVQSDKVVSFC"
     gene            complement(3624..4772)
                     /gene="wecB"
                     /locus_tag="SB502_000257"
     CDS             complement(3624..4772)
                     /gene="wecB"
                     /locus_tag="SB502_000257"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018060478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEG0433750.1"
                     /translation="MKKILIVFGTRPEAIKMAPLVKIMENRNDVNFRVCVTGQHRQML
                     DQILNIFDIKPDYDLNIMQENQDLYDITLKILCGMKNVLNDFKPNIVLVHGDTTTASV
                     TALAAFYQKIKIAHVEAGLRTYNICNPWPEEANRQIIGVLANIHFTPTVKSAENLIKE
                     GKNKEGIFITGNTVIDALFYMTEKIKNDKTFKIKVLSSIGNEYKINDNKKFILVTGHR
                     RENFGEGFLQICEALKIIAINNPDIDIVYPVHLNPNVQKPVKMLLLNISNIYLINPLK
                     YEEFIYLMSKSYFIITDSGGIQEEAPSLGKPILVMRETTERPEAVEAGVVKLVGACKQ
                     NIIRESQKLIDDQDEYEKMSKAYNPYGDGRACEKIINILIKGKNNESI"
     gene            complement(4827..5774)
                     /locus_tag="SB502_000258"
     CDS             complement(4827..5774)
                     /locus_tag="SB502_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEG0433751.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDA
                     DAMASKAEEIMLKYKIKEIVVSKENKVVGIIQFYAIGEI"
     gene            complement(5784..7442)
                     /locus_tag="SB502_000259"
     CDS             complement(5784..7442)
                     /locus_tag="SB502_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEG0433752.1"
                     /translation="MKKILILLFSCILCFGAVDVSQIISAEDQGSTTTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKMAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGSVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKPGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            complement(7444..8562)
                     /locus_tag="SB502_000260"
     CDS             complement(7444..8562)
                     /locus_tag="SB502_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEG0433753.1"
                     /translation="MEENKTLLEKIKDLSIFDSFKIIWFIMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTNGILSLLGSTSTASEDLNYLKGYIESSDMLKILDGKIKLKSL
                     YQEQHIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLQVEVEGFTPKSAHLIAQT
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQA
                     EAKASLVAQIETNLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            complement(8562..9224)
                     /locus_tag="SB502_000261"
     CDS             complement(8562..9224)
                     /locus_tag="SB502_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0433754.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKE
                     LQEKVKFVEDFAEIGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQG
                     KA"
     gene            complement(9221..10003)
                     /gene="kpsM"
                     /locus_tag="SB502_000262"
     CDS             complement(9221..10003)
                     /gene="kpsM"
                     /locus_tag="SB502_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide transporter KpsM"
                     /protein_id="HEG0433755.1"
                     /translation="MLNVIHALFFRELKTRFGKNRYLGYIWVVGEPMSVVLLVTIIGT
                     VIREYHHQVMPEGISIFMFLISGVMPFFMFRSIVTQLMNGIGANLSLFAYKPVKPIHV
                     FIARTLLEFCIYFVIFITVLFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
                     IVWHFVEPLRTLLAYFSIVFYWSSGIIFPTWLTPRPLLDIFYYNPLLHIMELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFIYYYNRQALTAAKKE"
     gene            complement(10075..10482)
                     /locus_tag="SB502_000263"
     CDS             complement(10075..10482)
                     /locus_tag="SB502_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433756.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIAKESKIAFLKGVQAKAEFKMASKEQMKIYFSKFPFAK
                     LDKSAKIYALELFWLKFTNNALGLSKKLEFCKK"
     gene            10557..11120
                     /gene="ciaI"
                     /locus_tag="SB502_000264"
     CDS             10557..11120
                     /gene="ciaI"
                     /locus_tag="SB502_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HEG0433757.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSVSYANNEEGKTL
                     NLKHQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTDDKDINASMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            11157..11846
                     /gene="dut"
                     /locus_tag="SB502_000265"
     CDS             11157..11846
                     /gene="dut"
                     /locus_tag="SB502_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HEG0433758.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFTWKHWKNISSPTNWENVRIEIVDIWHFILSLLLEEYRDKNNKDFKAIA
                     TEVNAVSVFQDFCKEEEYPNEGDIYSILNDIELIIHKCSGFGFNLEELLSIYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEECYKKA"
     gene            11848..12561
                     /locus_tag="SB502_000266"
     CDS             11848..12561
                     /locus_tag="SB502_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEG0433759.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLILMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINQKYYHYDNTNEVSTLKTIFEIFKIFIKFIGILLLCTLALFLPFINIFVYYLAF
                     YYLFHKLLMIDVTSTILDKESFKNFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFF
                     VIFLTHLGYQRILKLKAKA"
     gene            complement(12544..13509)
                     /gene="tilS"
                     /locus_tag="SB502_000267"
     CDS             complement(12544..13509)
                     /gene="tilS"
                     /locus_tag="SB502_000267"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEG0433760.1"
                     /translation="MQIKNEILSLLKRGKNLLAFSYGSDSSALFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKQAPKFQSNFEKKARDFRYDFFEKICLEQ
                     DYDYLILAHHLNDQFEWFLMQLSRGAGLAEILGMQEYEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKNFSNAFVSKFHQGLKRSFSYLGEDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKEFLKGDCVLGGKIALVYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(13499..14818)
                     /gene="rimO"
                     /locus_tag="SB502_000268"
     CDS             complement(13499..14818)
                     /gene="rimO"
                     /locus_tag="SB502_000268"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEG0433761.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPNKADVLIVNT
                     CGFIDSAKKESINVILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIVAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYFYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCAFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            14891..15988
                     /gene="prfB"
                     /locus_tag="SB502_000269"
     CDS             14891..15988
                     /gene="prfB"
                     /locus_tag="SB502_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEG0433762.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGF
                     KVETLDFQEGEETGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            complement(16149..16463)
                     /locus_tag="SB502_000270"
     CDS             complement(16149..16463)
                     /locus_tag="SB502_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433763.1"
                     /translation="MKKILTSALALGAMTLIVDCGDGDLVELKNNGNDQAMFDLGNQE
                     IMKKYPNYKLYDYTSVRTISDINNPEGKIKEMKRDLEIDKTPYSNYVFLLNPNDKKTI
                     KL"
     gene            complement(16585..17703)
                     /gene="truD"
                     /locus_tag="SB502_000271"
     CDS             complement(16585..17703)
                     /gene="truD"
                     /locus_tag="SB502_000271"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HEG0433764.1"
                     /translation="MNLAEENTIFKPLYSLKHSPINAYFSKNSDDFVVREKPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHSKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALMNLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     GRFKARDISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDEEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(17672..18493)
                     /locus_tag="SB502_000272"
     CDS             complement(17672..18493)
                     /locus_tag="SB502_000272"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEG0433765.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNI
                     KIIGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNG
                     GTLKPNHVFIKPKLRASFFYEVAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLD
                     DYTLYSGEEYEILFAFDEKERQNIETIAKKHGVKLNIFGKAVKGKYEFSGREHHF"
     gene            18580..19653
                     /locus_tag="SB502_000273"
     CDS             18580..19653
                     /locus_tag="SB502_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HEG0433766.1"
                     /translation="MKKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQD
                     DDIYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKN
                     DFLDKYKYLEKFGDEEDKKLYAKYDYLYYASEILDYLPEYIGDGVFYLASKMIEKYPE
                     KKIEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNA
                     FDNEIKELKEIKHNFKDFNIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNP
                     TLSYKIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSGREFEDFYILSRFE
                     FLALIEGIQAPSLKNHTLKVSLI"
     gene            19650..20033
                     /locus_tag="SB502_000274"
     CDS             19650..20033
                     /locus_tag="SB502_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEG0433767.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIHTAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            20026..20709
                     /gene="rsmD"
                     /locus_tag="SB502_000275"
     CDS             20026..20709
                     /gene="rsmD"
                     /locus_tag="SB502_000275"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEG0433768.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPPKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALMAAEA
                     LSNHALKAYAIELDAKAYKIALENAKNIDPNLEVIHANTFEILPKLIENSKNEIILYL
                     DPPFDTREGFSDIYEKIYHFLENLDLKTLNLIIFEHHSTIKTPEKIQNFQKVKEKKFG
                     STSLSFYAS"
     gene            20768..21814
                     /locus_tag="SB502_000276"
     CDS             20768..21814
                     /locus_tag="SB502_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEG0433769.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            21814..22155
                     /locus_tag="SB502_000277"
     CDS             21814..22155
                     /locus_tag="SB502_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433770.1"
                     /translation="MKMDNFLNTYNMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            22218..22415
                     /gene="flgM"
                     /locus_tag="SB502_000278"
     CDS             22218..22415
                     /gene="flgM"
                     /locus_tag="SB502_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HEG0433771.1"
                     /translation="MINPIQQSYVANTTLNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATASAIADSLI"
     gene            22457..22891
                     /locus_tag="SB502_000279"
     CDS             22457..22891
                     /locus_tag="SB502_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HEG0433772.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDSLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            22901..24727
                     /gene="flgK"
                     /locus_tag="SB502_000280"
     CDS             22901..24727
                     /gene="flgK"
                     /locus_tag="SB502_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEG0433773.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAIESIVRLHDEYSYYKLKGASNQLEYTKYMASTLQEIAQRFP
                     DLQNTGILKDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKINGGQLGAQLDLRGRNYSKSKGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNDNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASDMKVKDSILNDPSTVRASSNGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            24744..25499
                     /locus_tag="SB502_000281"
     CDS             24744..25499
                     /locus_tag="SB502_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004306512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HEG0433774.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFTAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSR
                     LKNEISLYELFYQAYEKRENTTDAILAFIQKIKTLNSYSSYGYDFFFGKIWQNTPNSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHTHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQSKERQI"
     gene            25510..26274
                     /locus_tag="SB502_000282"
     CDS             25510..26274
                     /locus_tag="SB502_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEG0433775.1"
                     /translation="MGFEHLDTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFSTALGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(26267..>26537)
                     /locus_tag="SB502_000283"
     CDS             complement(26267..>26537)
                     /locus_tag="SB502_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEG0433776.1"
                     /translation="LELSQAFKKIDIFDSLVFSMLSVAMKSGRLEVLSEEIAKYYQQK
                     SENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGINFN"
BASE COUNT         9430 a         4458 c         3526 g         9123 t
ORIGIN      
        1 aaccaaatct agcaaataat tttcaccata aaaatctcta atatccaaca tcccaaaata
       61 tgcttgtttg tcatttttca catattcata taattcttct aattctgaaa tatgtatata
      121 tttatcatta ttttgaaaat ccaattcttt atcactataa atcaacaaac aagcttcttt
      181 gttttctttt tggaaattaa aaatatccaa tgctttaata tattcttctt gcgaatttac
      241 atacaccaat aaataaaatt tgtacttata ttcaaattgt tttttataaa caacagaagc
      301 tataaatttt aatctatctg tatatgtatg ctctttcatt acttttctta aagcatttaa
      361 ttttattttc ttgcaataca tttcatcttc acatgctaac tttaatttat cttttaactc
      421 atttacattg tcagatgata tcactaaatc tccgaaaaaa tttcttaaag ctctagaaaa
      481 attacttaca acaaatgtat tacatgctat aagttcaaaa gctcttctag caaacattgt
      541 ttgagattgc ttaacagtat ttattgttat cccaaattta taacccttat atgcttttac
      601 aatctcatta aaaggtaaat ttcctataat catatcttta taacaattag gaaaagtata
      661 atgagaatga ggattattaa aatttctatc ataaatactt atatttttat aaggttttat
      721 cgcatttata agattgtcaa agtccaattg tctttgagga tatcgcaaat aatatgatcc
      781 agcgaaatta aattcatctt tgcgatcaaa ttcttctata ggattataca tttttgtttg
      841 agctgcaaaa ggtaaacaat acacatcttc atgtccggca taaaatttat actttgagac
      901 acagtcgata tctgtagtaa aaataaaatc aacagaacaa gctattggta aaaaagtatt
      961 aaaatgtaca ggatcttctt tgttccaaaa tatagtagga atatgatttt ccttgcaata
     1021 tccaatcaac tcttgaagct ctatggaaaa tcctgaaatc tttaatttcc acaaagaatt
     1081 ctttccttgc cacgctgact ctataaatag taaactgggt ttaaagtgca taatttcatt
     1141 tttccaattt tctagactta attgtaataa atcacattca tatttaaagg attcatatgt
     1201 aaattcatcc attatacatg caattttcaa taaatctaag ttttcaattt tacattcaaa
     1261 aatttgattt tttctaaact ctatatttct tttaaactta tttttttctt gaaataacag
     1321 atttttattt ttctgtctta gtttaaaatt cctatattct ttaaataaat tatatggaag
     1381 gattagaata tctttaatat ttttagattt gactatacga tttcctattc tatatgataa
     1441 agtattttct attcttttca attcgctatc tttttgtttt aacttctctt tgcaaacctt
     1501 caaatcttgt tcaaattgac atttctcttt atttaattta gctttttgca cttctaaatc
     1561 atttattcta gtgtataatt caatattatt cttagaagta atttcgataa ttttagaaat
     1621 ttcaacagat aattttttac tataatttaa tgattgagta attctatatg attccaaagc
     1681 attgtgataa gaaacattgg ataatatatc tttatattct aatcgttctt taggatagta
     1741 taaatgtgtc ggcgtagcat taaaagtatt ccaataaaca taatctaact tttctaatat
     1801 aacattaatt cttttaaatt ctatactgtt gatagcttct atatataaca atggtctata
     1861 tttttttata gtatttattg ccccatttaa aaccttagtt tccatccctt ctacatctat
     1921 ttttattata gaaatatctt tttcaaattt tatatcatcg agaggatgta aaaaaatatt
     1981 accaaaatct tcaattttta aagattgtcc tcctaaattt tcaggattta aattatctaa
     2041 aactgccatt tcttttttgt ctgataatcc aaattcatat aattttaaat ttttaaatcc
     2101 atttaacttt atacttattt taaatatatc acaaagtgtt tgattagcct caaaagcaca
     2161 tacatcaaag ccatgtgctg caagatataa agaatgattt cctatatttg ctccaatatc
     2221 aactataata gtattctttt tcgccttttt taaaaaatct tgaagcattt catattcata
     2281 aggaattaac tcattgtaaa tctttttttg tatataatcg atatttctat ttggaagata
     2341 gatcttatag cttacttctc cacactttaa taaaacaata tcattagaat tcataacata
     2401 atccccttag ttattaacaa aaacttacaa ctttatcgga ttgcacttcg ataaattctt
     2461 tatgtcttac tagtactgca acaacatctg cttcatcaag tgcttgactt agacaaacta
     2521 attttatatt tcttttattt tgtaatttta atggtagttg ttttatattt ggctcaacaa
     2581 ccaatatttg actagcattt tcacttgcaa gttttataac tatatctaaa gcaggagatt
     2641 ctcttaagtc atcaatatct ggtttaaatg ccaatcctaa acaagcgatc ttaggcccta
     2701 atatatcttt aatttttttc tttatttttt gcacaacgaa atttggttta ttgtcattga
     2761 cttctctagc cgttttaata atcttggctt catttggatt ttgatataca ataaaccatg
     2821 gatccactgc tatacaatgt cctccgactc cacaacccgg ttgcaaaata ttaactctag
     2881 gatgacgatt agcaagtttt ataagttccc atacatttat atctaattta tcacataaaa
     2941 tagataattc attagcaaat gctatattta aatctctaaa tgaattttca gtaagtttag
     3001 tcatttccgc tgttctagca tttgtcataa tgcattcgcc ttgaacaaaa attttatata
     3061 gccttattgc atattcagca catttttgag tcatacctcc aattattcta tcattttcta
     3121 caagctctct tataacttgt ccaggtaaaa ccctctctgg acaatgggct attttaatat
     3181 ccgacacttc gccacattga tgaggaaaac tcaaatctga tctttcttct gcaagccact
     3241 ttgccatttg ttctgttgtt ccaactggag atgttgattc caagattacc aaattacctt
     3301 tttttaaaac ttttgctatt gctttagatg ccatctcaat ataatctaaa tttggctcgt
     3361 gattatctcc tttaaaagga gttggcacag caataataaa agcatcagcc tcttcaggta
     3421 atgttgttgc tttgagataa ccatcattta caaccatatg taccaaaata tctaatccag
     3481 gctctactat atggattttt cctttattta taatatctac tatattctga tttatatcca
     3541 cacctataac cttaattttt ctactagcaa aaatagcagc ggtaggaaga cctatataac
     3601 cgagtccaat gacacatact ttattaaatt gattcattat ttttcccctt tattaatata
     3661 tttataattt tctcacaagc cctaccatct ccataaggat tatatgcttt gctcattttt
     3721 tcatactcat cttgatcatc aattaacttt tgtgattctc ttataatatt ttgtttacaa
     3781 gctccaacta attttaccac tccagcttct acggcttctg gtctctctgt tgtttcacgc
     3841 attaccaata tgggctttcc taaactagga gcttcttcct gtataccacc cgaatcggta
     3901 attataaaat acgattttga cataagatat ataaattcct catatttaag aggatttatt
     3961 aaataaatat tagaaatatt taaaagaagc atttttacag gtttttgcac attaggattc
     4021 aagtgaacag gataaactat atcgatatct ggattattga tcgcaattat ttttaatgct
     4081 tcgcaaattt gcaaaaatcc ctcaccaaaa ttttctctac ggtgtccagt cactaaaata
     4141 aattttttat tatcatttat tttatattca ttaccaatag aagataaaac ttttatttta
     4201 aaagttttat catttttaat tttttccgtc atataaaaca atgcatcaat aactgtattg
     4261 ccagtaataa aaataccctc tttatttttt ccttctttta taagattttc agcactttta
     4321 accgttgggg taaaatgaat atttgccaaa acacctataa tctgtctatt tgcctcctca
     4381 ggccaaggat tacaaatatt ataagttcta agtcctgctt caacatgtgc tatttttatt
     4441 ttttgataaa aagcagccaa cgctgtgaca ctcgccgttg tagtatcacc atgtactaaa
     4501 acaatatttg gtttaaaatc atttaataca tttttcatgc cacaaaggat ttttaaagta
     4561 atatcatata aatcctgatt ttcttgcata atgtttaaat cataatcggg tttaatatca
     4621 aaaatattta gaatttgatc taacatttgt ctatgttgcc cagttacaca aactctaaaa
     4681 ttaacatcat ttctattttc cattatttta actagcggag ccatttttat agcttccggt
     4741 cttgtgccaa atactattaa aatttttttc accaaataaa aactcctttt aatttttcac
     4801 taattataat atataaaaaa tgcaaattaa atctccccta tagcataaaa ttggataata
     4861 cctacaacct tattttcctt agatacaaca atttctttaa ttttatattt tagcataatt
     4921 tcttctgctt tacttgccat agcatcagca tcaactactt taggatttgt actcatgatt
     4981 tctttagctt taaaatcaaa tcttggttta tcacttgctt ttaaagcacg acgcaaatcc
     5041 ccatcagtga taataccaac caatttttca ttttcaagta ctacacaaag tcctagtttt
     5101 ccactagtca tcacatcaac aagatcgtta aattcggtat caggatgaac tataggaagg
     5161 ttgcttgaaa ccataagatc ttttaccttg gttaaaagct tacgacccaa acttccccct
     5221 ggatgaaaaa gggcaaaatc atcaggcttg aaatttctta ccttcatcaa agcagcagct
     5281 aaagcatccc ccataaccaa agttgcggtt gtcgaagaca taggagcaag ctgcaaagga
     5341 caagcttcct tttccacagc tatatttaaa aatatatcgc tttgctttac aagggtggaa
     5401 ttttttttac cacacattac tataagtgga attttacgct tttttatagc tggaatgatt
     5461 tttaaaattt cttcagtttc ccctgaattt gaaatagcaa ttaaaacatc ttcagaagtt
     5521 agcattccaa gatctccatg caaagcctct cctggatgga tgaaaaagct tggcgttcct
     5581 gtacttgcta aagtagctgc tatcttagca cctatatgac ccgatttacc cattccactg
     5641 actatgcaac gccctttggt atttagcatc aaattcacag cttgattaaa attttcatct
     5701 aaatttttag ccaaatccaa aatagcttgc gcttcttttt caaagacttc tttggctatt
     5761 tcaagagtat tcatttttaa accttaaaga ttaagcacaa cattggttgc aatagcaatt
     5821 tgataaagaa tttgagttaa cattgaaaaa atttgcaaat tctcactatc tacttttggc
     5881 aatactaaca cagaatcgcc tggtttcata tctataccac tatgatattt ttcagctttt
     5941 ccattgcttc gtatcaccaa aacttttgaa gtatccgctc tttctccata acctcctgca
     6001 agattgatat aatatcttaa atctttgccc ttatcataca caaaagctcc aggtaaagaa
     6061 acctcacctt gaactatgat gagattattc ttacttggta cattaatagt atcaccatct
     6121 tctaaaataa ccgaattata agactttgga ttatcaatga caatttgacc cttaggctct
     6181 acttgcttag ctctttggat aaattctaaa atcgtttttg cttgttgagc tcttatagct
     6241 gcaccttgag ctgtaacaga accactagtt aaagctagag tttcaagctc tttaagctga
     6301 gcattgataa gttctttttg agttctagct acactttttc taaacacttg taaagcttgc
     6361 atgtttgatt gtggattagc tttaattaat ttagaaatat cttctaaagt cgttccttta
     6421 cccacaacta aagtttttaa accattatgc tcgccattta cacttatagt tatattttca
     6481 gaaacatact cagggtgaaa ttctacctca tctcccgttc taagtaaaac ttttgaaaat
     6541 tgcattttat tataagcact gacatcaagt ttatgatctt caccataact ttttacgata
     6601 gcattagtca cgataggttt agcacctgat actctagcta agtcagctaa agttttaata
     6661 tcatttgaaa gttcaaaacg aaaaggtctt tgcacatcac cgttaacaaa agcgtaattt
     6721 tgaacatttc ctactaaaat aacatctcca cttctaaaag gaaaaagatc catttgcccc
     6781 tttagtaaaa aatcatataa atcaatattt tttatcacgc tgttattacg caaaatttga
     6841 atatctctaa aacttccata ttctaaattt ataccccctg ctttatcaag atactggatc
     6901 actgaatccg aactaagtcc ttgataaagt cctggagcat taacgcttcc tgttacaaaa
     6961 acactgacat tttgataagc attcatatct gcataaacaa aaacattgct tttatagatt
     7021 ttattaacac gtgcttttat aacacttaca agggcgctat ttttcacacc tagtaaattt
     7081 acagctccta ctttagggat aaaaatattt ccttgagaat ccaccactaa aacttgcgaa
     7141 aactcaacag ctccccaaat tttaagactg atttgatcac caactgccat cttataatct
     7201 gggttataaa ctctttgatt gtaattttta aaatttccat taaaaagatg agcgccaaat
     7261 actaaaattt gatgaatttt tgtaagatta ttttctttat ttgctatatc ataatttgag
     7321 cttaaatttt gatctatgct agttgtagta gaaccttgat cctctgctga aatgatttgt
     7381 gaaacatcca cagctccaaa acataaaata caactaaaaa gtaaaattaa tatttttttc
     7441 attttaatac ttatgctcct ctattatcat tttaataaat ttaacaatcc caaaaatcaa
     7501 agataataca ataaatgctg ttaaaatatc ataaattctt tcaggatatt ttgcgctttc
     7561 tggaatatct ggactttgaa tgatgacaag ttgttttatt tttcttaatg cttctattct
     7621 agcactttca taagctttta aagctgcttc ataagctttt tgcgcaaaag tagcttctat
     7681 agttagatct tgaaatttag cagccaaatc attaagcttt tgagaagaat tgttagctga
     7741 aattttagat ttttccctta aaagctgttt tttaatcgct tcaatttctg ctttaagtgc
     7801 tactacttca ggtgctgcat cattcatata gctttgtaaa gttaaaagtt tagcttcttt
     7861 ttgagctaaa ttagtctcaa tttgcgcaac caaacttgct ttagcttcag cttgtttcaa
     7921 gggatcaaaa accccatatt tattttgaaa agcaatcaaa tcattttgtg ctttttgata
     7981 tcgttctttg tatttttgta cttcattttc agcaaaagcc atttgttctc tagctgcttt
     8041 atgagagatt tcgttgataa acttttcact ttcttgcata atagtttgag caatcaaatg
     8101 agctgattta ggtgtaaaac cttctacttc tacctgcaaa agcttagtag tttcatccgt
     8161 atgcacctta actcttgctt ggtaatattt aagataagat tctatcgaac ttgaatccca
     8221 aattttaaaa ggcaaatcta tatgttgttc ttgataaaga cttttaagtt taattttccc
     8281 atctaaaatt tttaacatat cacttgattc tatataacct tttagataat ttaaatcttc
     8341 gcttgctgta gaagtactac caagcaaaga caaaattcca tttgtttgag cactttctcc
     8401 acttgttgat ctaacatcta aaatcatcgt gcttacatat cttggcgctg caatcaatgt
     8461 ataataaatc acaacaaaaa tcattataaa ccaaataatt ttaaaagaat caaatatact
     8521 taaatctttg attttttcta ataaagtttt attttcttcc attaagcttt tccttgatat
     8581 acagctattc cttcatctac atcatcataa accgtaattt gtccattttt catataaatt
     8641 attttatcac accattcttt aatttcagct acattatgag ataccataat cacctttgat
     8701 ttgcttaatc tttctctata taatttcacg cttttttccc taaaagcagg atctccaaca
     8761 gctccagcct catcgatcaa ataataatca aaatcaaaag ccatactaag tccaaaagct
     8821 atcctagcac tcattcccga agaataagtc ttcataggct catcaaaaaa ttttcctatt
     8881 tcagcaaaat cttccacaaa ttttactttt tcttgaagtt ctttaccctt gtatccatac
     8941 accctagcta caaatttagc attatctctg gcagttaaag aaccttgaaa agctccattt
     9001 aaacccaaag gccaagataa ttttttatta gtaattatct tgccactatc aggaagctct
     9061 gctccgctta aaagtctcat gagagtggac ttgcctgcgc cattatatcc cattaaacct
     9121 atgctacaat tttcaggaaa ttcaaaagta aaatttttaa aaacataatg ccttccacca
     9181 ctaaataaag gataagattt agttagatta attagcttga tcattctttt tttgccgccg
     9241 ttagagcttg tctattatag tagtaaataa aaagccctat aaataaaaca agtaaaatcc
     9301 aaaatatagc ataaaaataa ctatattcat cttgcaaagg ataattttca aaaaaattaa
     9361 atcttaaaag ctccattatg tgaagcaaag gattgtaata aaatatatca agtaaaggac
     9421 gaggagttaa ccaggtggga aatataatcc cagaactcca ataaaatact atactaaaat
     9481 aagctaataa agttcttaaa ggttctacaa agtgccaaac aatagcaaaa caaatcccta
     9541 aagcaaaagc tgagcatatg agtaaaaaaa tacaaaataa aactccaagt aaatgaacag
     9601 gaaatacatc gagtctaaag aaccaccctg caaaaaaaag cacagtgata aaaatcacaa
     9661 aataaataca aaattcaagc aaagttctag caataaatac atgtataggt tttacaggtt
     9721 tataggcaaa caaagataaa tttgctccta ttccattcat aagctgagtt actatacttc
     9781 taaacataaa aaaaggcata acgcctgaaa tcaaaaacat aaaaatagaa attccttcag
     9841 gcataacttg atgatgatat tccctaataa cagttcctat aatagtcacc aaaagcacaa
     9901 cactcatagg ctctccaact acccatatat atccaagata cctatttttt ccaaatctag
     9961 tttttaactc tctaaaaaat aaagcgtgaa ttacatttaa catttatttt ctatacctaa
    10021 caatttacat aaaccataat cataactcat ttttttaaac aaaatcataa aaatttattt
    10081 tttacaaaat tcaagctttt tactaagtcc taaagcattg ttagtaaatt taagccaaaa
    10141 aagctctaag gcataaattt ttgcactttt atcaagttta gcaaagggaa atttagaaaa
    10201 ataaattttc atttgctcct tgcttgccat tttaaactcg gccttagctt gcacaccttt
    10261 taaaaaggct attttacttt ctttggctat attaagtgct atacttgaat tttcactggc
    10321 taatcttata tgcttagtat cttcatgaga agcgataata aaagctaaat tcttctcatc
    10381 aaaagcataa aaagcactag ctgtataaac acctttttca tcaatcatag cccaagataa
    10441 aagctgctca ttttttataa attctaaaat tctttcatcc atattgtaaa aattatacta
    10501 aaatattttt aaaaataacc gatttttaat ttaaactata aatataaggg gaagaaatgc
    10561 aaattgatgc tagcaaaaac caaagttttt cgatggatta tacaacaaaa agtggcaaac
    10621 atttagcctt atctatgtat gacaatcaaa gcgtgagtta tgcaaataat gaagaaggta
    10681 aaactcttaa tcttaagcat cagtatggct ttagctttac ttttgaaggc tctaagctca
    10741 cacaaaatga tcttgatgag attaaaaatg ctatgaaaga agttgaacct atgatcaaag
    10801 actttttagc aaattctaaa gtcggagagt taaagccaaa agaaattata gaatcagcta
    10861 tgcaaatggc aaatgttcta ccaacaccaa atgatgaaaa ccatcaaaat gctattatga
    10921 ataattttac aaataaactc agtgatttac taaaacaaaa tcaaacagat gataaagata
    10981 tcaatgcttc catgcttgaa gatagcaaaa aacttcttga tgaagtttta gaacaaatga
    11041 aaaaacaact tgaaaaacag caagaaaaag ccaaggaaaa tcaagataag acagatgata
    11101 gtttaaatct ttacgcttaa atcatataat attaaaaatt atcaaggagt ttttaaatga
    11161 caaatatcga aattttagaa aatatgctca aactccaaca aaaactcaac gatgaaacaa
    11221 acggcttaaa ttgggaaaat ggctacacca aagaaggaaa actgatcagt tggagacgct
    11281 gtatttatat ggaatgtgca gaacttatag actcttttac atggaaacat tggaaaaata
    11341 tttcaagtcc aacaaattgg gaaaatgtgc gtatagagat tgtcgatatt tggcatttta
    11401 ttttaagtct tttacttgaa gaatatcgcg ataaaaacaa taaagatttc aaagctatag
    11461 ccacagaagt taatgctgta agcgtgtttc aagatttttg caaagaagaa gaatacccta
    11521 atgagggtga tatttatagc attttaaatg atatagagct tattatccat aaatgcagtg
    11581 gttttggatt taatcttgaa gaattacttt caatatattt tactttagct attaaatgtg
    11641 ggctaaatct tgaaattctt tataagacct acataggtaa aaatgtttta aatattttta
    11701 gacaaaacaa tggttacaaa gatggtagct ataaaaaaac ttggaatggc aaagaagaca
    11761 atgaagtttt agctcaaatt ttagaacaag agcttgattt tgatactatt tataaaaaac
    11821 tagaagaatg ctacaaaaag gcataatttg gatattttaa aacttgcaat caaagatttt
    11881 ttaagtctta aatttttaaa atttgcctta attcctttga tttttagcct tatactgatg
    11941 ctttttttag gagtacttgg cttttcggcc ttgcttgatt attttaattc tttatttagc
    12001 gttggagagg attcgttttg ggcgtggttt tatgcccttc attttgtaca aattttaatc
    12061 accatcataa gttttttatt ttcaggtttt attgttgttt ttgcttcggt ttttttagcc
    12121 ctttttatca cttcttttct tactcctttt atcgctaaag aaatcaacca aaaatattac
    12181 cattatgata atacaaacga agtttcaacc ctaaaaacta tctttgaaat ttttaaaata
    12241 tttataaaat ttatagggat tttattgctt tgcaccttgg ctttattttt accttttatc
    12301 aatatttttg tatattatct tgctttttat tatctctttc acaaactttt aatgattgat
    12361 gttacaagca cgattttaga caaagaaagt tttaaaaatt ttcattctga tttttcgcct
    12421 ttagagttta aatttagcac tctttgtttt tatctactct catcagtgcc acttttagga
    12481 ctttttttgc aagtattttt tgtgattttt ctcacacatt taggctatca aagaatttta
    12541 aaactaaaag ctaaggcttg aaatatcgat tttgtgatta tataaataag ctcttaaaag
    12601 tcttggaatt ttagctattc tacactcttc tttaaaattt ttaggtaatt tttgacaagt
    12661 ttcatattca aaaacaatag cttgttcgtt tttatataca agtgctattt taccacctaa
    12721 aacacaatca ccctttaaaa actcttttct ttgcgctgtg cttaaaagta aacctttcat
    12781 tttcactgct ctagcaatca aactttcatt tttaggacaa ataagaagtc cttgaatttc
    12841 tttgatattt tcaaaatcat aaagtttttt cctatcttca ccaagataag aaaagcttct
    12901 ttttaaaccc tgatgaaatt tactcacaaa ggcattagag aaattttttc ttatataatt
    12961 tctaaaatat ttttcatttt cattactttc atcatggaaa taaaaaatat ctttttcttt
    13021 taaaaaagat gaaatttcat ctttacttat aaagagtaaa ggacgtaaaa gtgtataatt
    13081 tgatcgtttt tcatactctt gcatacctaa aatttcagcc aaacctgcgc cccgtgaaag
    13141 ttgcatcaaa aaccattcaa actgatcatt taaatgatgg gctaagataa gataatcata
    13201 atcttgctca agacaaattt tttcaaaaaa atcatagcga aaatctctgg cttttttttc
    13261 aaaattactt tgaaatttag gagcctgttt tatgaaaatt tttttatgaa atttcaaagc
    13321 aagttctttg gcttttaact cttctaaatc actatttttt ctagttttat aatttatcat
    13381 cacaagatca aagtcgatct tttcttgcat taaaagataa aaaagcgcac tagaatcact
    13441 tccataagaa aaagcgagta aatttttacc cctttttaaa agggataaaa tttcattttt
    13501 aatttgcatc tacttttctt aaagccttag caaggagctt tttatcaagg ttttgtaaaa
    13561 tttcacattc ataaatttgc cccatttcta aatttccaca ttcactttca ttgataagaa
    13621 tttctccatc aatctctcta tcccatctta gatctttagc tgcgatgaaa aactctccct
    13681 cgctactttc tcctgtgcaa actactaaac gcttttgccc tacttctttt tcaaaacttt
    13741 tttctatcac ttcatcaaca attttttcta tgattttaag ccttttattg atcactttaa
    13801 aaggcacttg ctccatatca aaagcagctg tatcttcttc cttggaatac gcaaaaacac
    13861 tcactctatc aaaaccaaag tctttaacaa atgcacaaag ttcttcaaaa tccgcctcac
    13921 tctcacctgg atgtcctacg ataaagcccg tgcgtaaaaa gctatttggc gcacttttca
    13981 ttaaatttag catttcttta agtcttgtgc tatttgcccc acgcttcatg attttaagca
    14041 tattatcact tatatgctgc aaaggcatat caaaataatt tacaaaaatt tcagaagcta
    14101 taatgcgttt gatcaaagct tcactcgcac tcgtaggata aaaatataaa attctagccg
    14161 ctcttatacc tttgattttt tccacctcat cgattaagcg tataagtcca tctttttcac
    14221 ccttatcaaa caaataagaa cttgtatctt gtgcaataaa agaaaagtcc ttataacctc
    14281 tagctaccaa atctttaagc tcagctacaa tgctacttat ttcgcgagat tttaacttgc
    14341 ctttaaaact tggaatagca caaaaagagc atttttgatt acaaccttcg gcaattttta
    14401 taaaagcatg ggaatttgaa cctgtgataa tgcgtttgga attttcactc tgtaaataag
    14461 tcgaatttga aaataaattt gtttttttaa gtatcatttc gtcgattctt tcataatcac
    14521 ccacacctgt gaaaagatca acctcaggaa gttctttcat aagttcttcg cggtaacgct
    14581 gcatcaaaca acccgtaacc accaaaagag aatctttttt tctttgttcg tgcaaatcca
    14641 aaatcacatt aatactttct ttttttgcac tatcgataaa accacaggta tttacgatta
    14701 aaacatcggc cttatttggt tcatcgcaaa gctcataagc actaagacgt cctagcatga
    14761 tctcactatc gactaaattt ttattacaac ctaaagacat aagataaagt tttgacattt
    14821 ttttcctata ttaaagtttt cttttgatat aatttttgat tttaaaatat aattatagca
    14881 aagaaatttt atggataatt acgaatttag cgaactttta aaaactttaa aaaacaaagt
    14941 cggcaacata gcctccatca tcaagcctga aaatatccaa acaaggctta aagaaatcga
    15001 agagcttgaa aattctcctt ctttttggag cgatgtaaaa caagcaggga tcataggcaa
    15061 agaaaaaacc aaaatcacca atctacttaa aaactatgaa aatgctttta atgccctaaa
    15121 tgacgcaagc gaactttttg atctggctaa tagcgaaaac gatacagaaa cgcttgaagc
    15181 tttatttaat gacgcaccaa aacttgaaga taccatcaca agtcttgaaa tttccatgct
    15241 tttaagcggg gaaaatgatg gtaaaaatgc cattgtttcc attcacccag gtgcgggtgg
    15301 aacggaaagt aatgactggg caagcatgct ttataggatg tatttaagat tttgcgaaag
    15361 agagggtttt aaagtcgaaa ctctagactt tcaagaaggc gaagaaacag gacttaaaga
    15421 tgtgagtttt ttggttaaag gagaaaatgc ttatggttat ttaaaagctg aaaatggcat
    15481 tcaccgtttg gtaagaactt ctccttttga tagtgcagga cgccgccata caagcttttc
    15541 aagtgttatg gtaagtcctg agcttgatga tgatatagaa attgaaattg aagaaaaaga
    15601 cataagaata gattattaca gagcaagcgg tgcaggcgga caacatgtta ataaaacaga
    15661 atcagccgtg agaatcacac attttccaac cggtatagtc gtacaatgcc aaaatgacag
    15721 aagtcagcac aaaaacaaag ccaccgcttt taaaatgcta aaatctcgtc tttatgaact
    15781 tgaactcatg aaacaacaag atagtgctaa tactggagaa aaaagcgaga taggctgggg
    15841 gcatcaaatc cgttcttatg tgcttttccc ttatcagcaa gttaaagata atcgcagcgg
    15901 agaagctttt tctcaagtgg ataatattct tgatggggat atcaaaaaaa tgatagaagg
    15961 cgttttgatt gctttaaaag cagagtaaca ggctttaaaa ataagtaatt tccgcaaaat
    16021 gtcagtataa aaaggaatta gaaagatagc gggattttcc cgcttgtttt attatcttgc
    16081 ataaaaccta agagcatcat tcacagaata ataaactctt ttcttaaaat ctttatcgca
    16141 ataaacactc acaactttat agtcttttta tcgtttggat ttaataagaa aacatagttt
    16201 gagtatggag ttttatctat ttctaaatca cgcttcattt ctttaatttt gccttctgga
    16261 ttgttaatat cactaattgt tctgactgaa gtataatcat aaagtttata atttggatat
    16321 tttttcataa tctcttgatt acctaaatca aacatagctt gatcgttgcc attgtttttt
    16381 aactcgacta aatcgccatc gccacaatct acaatcaaag tcatagctcc taaagccaaa
    16441 gcacttgtta aaatcttttt cattattttt gctcctagtt ttaaaattaa attaatataa
    16501 ctatacctaa atttaaaatt taaatatcat ttttgcaata aattctaaag taaaaatcac
    16561 gtaaaaattt aactcataat tatttcattc aaacaaattt ttatgcaaaa tttcttctaa
    16621 aaccacagta gcataagagc ctttttgcaa gaaaaactct atacaaaaat gagctttttc
    16681 ttcatcataa cgccatttta actcttctaa atatccccac ataaagcgtc ttgaaccttg
    16741 cattttagcc ttaaactcca aagtatcttt aaaaatttca ttttctaaat ttaaggccaa
    16801 accttctcct gtttcataag ccttagcacc gattaaaagc cccatggcgc ttatatctct
    16861 tgccttaaaa cgcccaagct cagcacttaa atcctcgcat aaaaaacact ttccaaaagg
    16921 ataatgccct aaaacctcac cttttaaaag cttaaaaaat tgttcttgtt ttttaagttc
    16981 cttagcttct tctttagaaa ttttataaat ttggatcaat tctttttcgc taaaatcatt
    17041 tgcaaaatgt gataactcca ctcttttact caaatagcga ttaaaaagct cactttgaaa
    17101 agctgaaatt aaaaactctt tcatttttac atttttcatt tttttgccac gcaaaatttc
    17161 aagcccttct ttataattat ccccaaattt tccaaaacgc tgataaccaa aataattcgc
    17221 aaaaccttgt ttatccaaat tcatcaaagc ttgttctagc tttaaagcat cgcttggcaa
    17281 aacttttttt aagcgtatga aaaaagaatt tccttttaaa tgccctattc ttagcttgtt
    17341 ttcatgggta aaaatttcta aaattttaag tttagaatga gaaaaatttg acaaaaaact
    17401 ctcaaatttt ttaggcatag aaaggtattg aaaggttgat ccttgcttgt ctttaagccc
    17461 tgcataacca aaatctctta ttttaacccc gcttgcttca cttaaaattt ttaaagcttc
    17521 atttgtggtt aaatcttttt tattgatatg caaaataaga tgttcaccct tgccgctaaa
    17581 ttcatacaaa ggcttttcac gcactacaaa atcatcgcta tttttactaa aatacgcatt
    17641 aataggacta tgttttaagc tatacaaagg cttaaaaatg gtgttctctt ccgctaaatt
    17701 catattttcc tttcactgct tttccaaaga tatttaattt cacgccgtgt tttttggcta
    17761 ttgtttctat attttgccgt tctttttcat caaaagcaaa caaaatttca tattcttctc
    17821 cgctataaag cgtataatca tcaagttttt taaaccaaga aataccgcat ttatttaaag
    17881 ctaaaagtct tgataaatct ttgcttaaac catctgaaat atccatagca caagaaatta
    17941 aaggtgcgac ttcataaaaa aaactagctc ttaattttgg ctttataaat acatggtttg
    18001 gttttaaagt gcccccattt tgtaaaattt caagcccttt taaacttcgc cctaattttc
    18061 ctgtataagc aagtaaatgt ccttttttta aaccttttct aaaaacggct ttatcgttaa
    18121 tctttgaaat gatagtaaga ctaatgtcta ttttatcatt gcttatagta tcaccgccta
    18181 tgatttttat attaaatttc ctagctgttt ttaaaaaacc tttttgcaag gctttgatct
    18241 cattttcgct taaatttttt ggtaaagcaa gtcctaaaag tgcgtatttt ggtacagcat
    18301 tcattgaaat agcatctgag atattaacaa gcattgcttt tgtagcaatt tgctctaagc
    18361 taaaccactc tcttttaaaa tgcacatttt caaaaaacaa atccttacta aaacaccaat
    18421 catcaataat agctccatca tcgccatttt tttcatttaa aaaagctttg ataataaaat
    18481 cttctttgtt cataatgcgt gattttataa aatttccttt taaattctag tgaattttag
    18541 aataatttta tataatataa aaatatttaa ggaaaaacca tgaaaaaatt agaattaaga
    18601 atttttagat ttgataaaac caaggattat gaggcttatt ataaacctta tatttatgat
    18661 aattatgaaa attttgcaag tttttatgat ctgcttttgc aagttcaaga tgatgatatt
    18721 tattttgatt ttgataaaga tgaagatact tacatagttg taaataagca aatcatacca
    18781 ctttttacac ctttagaaaa aatagcaaaa gaatttgatt ttagtctttg tatcgagcct
    18841 ttaagcacaa aaagagccat taaagatctt atcatcgata aaaatgattt tttagacaaa
    18901 tacaaatatc ttgaaaaatt tggtgatgaa gaggataaaa aactttatgc aaaatatgat
    18961 tatttatatt atgcaagtga aattttagac tatcttcctg aatatatagg cgatggagtg
    19021 ttttatttgg cttcaaaaat gatagaaaaa tatcctgaaa aaaagataga aattttaaaa
    19081 actctagcag ataaagaaaa gggtattttt tatcatcttg aaagcaaaaa tgaaatttta
    19141 gaaacaacga tcaaaaacct acaaaatgaa attttaaatt tagggctttt tgataaaaat
    19201 attttacact ttgatttacc taaaaccaat gcttttgata atgagatcaa agaacttaaa
    19261 gaaattaaac ataattttaa agatttcaat atagcttttt atggttttaa tgcttgcgat
    19321 actttaaaat cgaaacttaa ggctaaattt atttcctatg aaaacagtat aaaaaataat
    19381 ggctttagct tgcttaatct aaatcctacg ctaagctata aaatagccgc agatattgtt
    19441 ttggacgctt atgatagcgg ggctgatttt atggtagtaa aagaagaaaa agatttttat
    19501 ctttttgata cttgtgctaa aaaacttatg caaacaagtg gaagggaatt tgaagacttt
    19561 tatattttga gccgttttga gtttttagcc cttatcgaag gtatacaagc tccatcatta
    19621 aaaaatcaca ctttaaaggt tagtttgata tgaaaatctc tttagaatgc aaagatctca
    19681 tcatagaaaa aactttagaa ctttttttaa aagatcattt ggtaatgaaa aaaaattgtg
    19741 atttcatcat tagcgatgaa aaaattcata ccgcaaaacc cttatttatc atctctaaaa
    19801 actctccatt tttaagcata ccatttagca aagaagcctt gtttgagtct ttaaatgaat
    19861 ttgataatgc cttaaaagca gcagctttgc aacttgcact tgaacaaaaa agactgcttg
    19921 aagaaaaaat tgacgctatt gctttggaat ttaaaaaaga ttatgaaaat aaaatcgatc
    19981 ttgccataaa agatcttaaa aacaaactcg taaaagcact taatgatgaa tgatgaattt
    20041 ataagcgtta aagacttttt taatcacaat gaaaaaagaa aaaaatttct tcaaaaacaa
    20101 gaaattaaac ctcctaaaga aaaaacaaaa aaaactaaag aaacaaagct ttatacaaat
    20161 atagaaagtg gtaaatacaa agggaaaaaa ctacttttac ctagtcttac aacaacaaga
    20221 agtactaaaa gcatagtcaa aagttgtgtt tttaatgtaa taagagaaga tttaagaagt
    20281 aaaattttca ttgaagcctt tggaggaagt gctttaatgg cggctgaagc actaagtaat
    20341 catgctttaa aagcttatgc tatagaactt gatgcaaaag cttataaaat tgctttagaa
    20401 aatgctaaaa atatagatcc aaatttagaa gtgatccatg caaatacttt tgaaatttta
    20461 cctaaactca tagaaaattc aaaaaatgaa atcatattat atcttgaccc accttttgat
    20521 accagagaag gttttagcga tatttatgaa aaaatttatc attttttaga aaatttagat
    20581 ttaaagactt taaatttaat catttttgaa caccactcaa ccataaaaac tcccgaaaaa
    20641 atccaaaatt ttcaaaaagt caaagaaaag aaatttggat caactagctt aagcttttac
    20701 gcttcttaac ttacttggaa cacttcttgc ttgatctatc atcaacaata gattaaagga
    20761 agaatccatg agagttttaa cgatattttt actctttatg acaagcattt ttgcagtgca
    20821 aatcaaggat gtagcaaaca ctgtaggtgt aagagataac caacttatag gttatggact
    20881 tgttgtaggg cttaatggaa gcggcgatgg aacaagctct aaatttacac tacaatccat
    20941 ctcaaacctt ttgcaaggta tgaatatcaa agtagatcct aacgatatca aatcaaaaaa
    21001 taccgcagct gttatggtta cagccaaact tccagccttt gcaaaaagcg gagataaact
    21061 tgatattacc gtttcatcta tgggtgatgc aaaatcttta caaggcggaa cacttttact
    21121 gactgcactt cgtgggattg atggtgaaat ttatgccata gcacaaggct ctatctcaac
    21181 aggaggttta acacctagac caggaggagc aggttctcac tcaactgctg caactgtaat
    21241 gggcggagct aatgtagaaa gagaaattcc acaaaatttt agccaaaaca atgatctaac
    21301 cttaagttta aaagtagcgg attttaaaac cgcaaacgat atagaaagag ttttaaatac
    21361 tgtctttggc gaagaagtag ctaaagccat cgactctcgc acagtaaaac tcaaaaaacc
    21421 tgaagatctt tcaaatgttg attttatggc aagagtttta gaacaagata tagcttataa
    21481 accacaaagc aaagttatca tcgatgaaag aacaggaaca gtgattgctg gagttgatgt
    21541 agaggtagaa cctgttttaa tcactcataa agatatcact ataaaaatag atccaaacaa
    21601 taacgcagta gctaatcaaa atgaaatcga tatgaaagat ggtggttttg tagatccaag
    21661 ttcaaatacc ttaagaatca acaatgcaaa aagcacagtt gcaaatatag ctagaatgct
    21721 gaacaagctt ggagcaaccc caaatgacat tatcgctatt atggaaaatt taaagcgcgc
    21781 aggtgcaatt aacgcggatt tggagatcat ctaatgaaaa tggataattt tttaaatact
    21841 tataatatga atagtgcttt acttgatcgt gcagccaaag caagaagttt agaatcaagc
    21901 atcaaaataa atgacaatga tatagttaca aagagcaaag aagatgaagc cttaaaagaa
    21961 caaacggatg cttttgaagc atttttttta aagcaagttt tagacgtatc tttaaaaagt
    22021 caaaattcac tctttggaaa agatgccagc gatgaaatat actcttccat gtataacgat
    22081 accatgagta aagctttaag tggaggtatg ggtttttcaa aattattata cgatttttta
    22141 aaagaaaggg gttaagtttt ttaaatttgg gtcgatatgg tttgtagagg attataacta
    22201 agatcaagga ggcagaaatg atcaatccta tacaacaaag ttatgtggca aataccacat
    22261 taaatacaaa tagaatagat aaagaaacta aaacaaacga tactcaaaaa acggaaaatg
    22321 ataaagcgag taaaatcgca gagcagatta aaaacggtac ttataaaatc gatacaaaag
    22381 ctacggcttc tgcgattgct gactctttaa tctaaaactt tcattctcct ttttttgaga
    22441 gagaaaagga gaaaatatgc ttaaacaaag acttgatgaa gtaaatgcta tcttagcaaa
    22501 acttattgct ttaaccgaag aagatataga aaatatcaaa gtggctaaac atgagagtgt
    22561 aacgccaagt gtagaagaaa aaaacaaact tatcgccgaa tttattacag ctaaaaaaca
    22621 acttgatgtt gccttggttg agctaaataa tagctctaca aaagggctta gtgaactctt
    22681 agatgatgaa gataaacaaa aactagatct acttaaaaaa aatcttcaaa accttcatag
    22741 taaaaacaaa gagtatgcta aatttgttct tattgtcaaa gattttcttg atagcttagt
    22801 aaataaaatg tttgatatca atgatggaac aaataatgct tatggagata aaaagacaaa
    22861 tccagagtca attttcaaga tcaatgtata aggatttata atgggtattt ttggaacatt
    22921 atacacaggt gttacaggct taaaggcaag cgaagttcaa atcgcaacaa ctggaaacaa
    22981 tatctcaaat gctaatgcaa ctttttatac acgccaaaga gtagtgcaaa ctacaaatgg
    23041 gtatattacc acaggtggag ttcaagtagg cacaggaact gctatagaaa gtatagtgcg
    23101 tttgcatgat gagtattctt actataaatt aaaaggtgca tcaaaccaac tagaatacac
    23161 taaatatatg gcttcaacct tacaagaaat cgctcagcgt tttccagact tacaaaatac
    23221 tggaattttg aaagatttag aaaattataa caaagcttgg aatgattttg catctaaccc
    23281 taatgaaaat gccacaaaaa tagcccttgt aaaagcttct caaaccttaa cagaaagcgt
    23341 taataacact tttgcaacct tggataaaat ccaaaaaaaa gtaaatgatg atattaaaaa
    23401 tacagttgat gagattaata gaatcggtga agaaattgct actataaata aacaaattta
    23461 tggacaagaa gccttaccaa cagaacacgc aaatgagctt agggatagaa gagatgaact
    23521 tgaacttacc ctttcaaagc tagttagtgc agttgcaagc aaaaatgaaa tcaatcaaga
    23581 caatcgcctt gatacaacca tcactgatcc aggacatcaa tacaatctaa gtatagaagg
    23641 ttttagtata gtagatggga taaattttca tcctttaaag cttgattatg atgataaaaa
    23701 taaatcttat agcatttatt atgaaactcc tgatgaaaaa gttcgcgatc ttactgcaaa
    23761 gattaacggt ggacagcttg gtgctcaact tgacttacgc ggtagaaact atagcaaaag
    23821 caaaggaaaa tatgaagatg gaattatcca aggttatatg gattctttag atacttttgc
    23881 taagaccatg atcaatgaaa ctaacaatct ttatgcgagt tctgcgaaaa gttctgttac
    23941 ttctgattat ctatctggac ttaagggaga tattccttta gttaattacg acagaaccat
    24001 acaaccagga agttttgata tagtcattta tgatgataaa ggcgataaaa aactcaccaa
    24061 aaccatcacc atagatgtaa atacaaccat gaatgatatc atgcgtcaaa tcaatgccaa
    24121 tacagatgat aatgacaata aaaattcaaa cgatgatgtt gatgatcata tcaatgcaag
    24181 ttttagctac gatgcaaaaa ctggagatgg tttattccaa atcaatgcaa aatcaggctt
    24241 taaggtagcc attgaagata aaggcacaaa tttcgcaggt gcgtttagca taggtggttt
    24301 tttcagcgga actgatgcaa gtgatatgaa agtaaaagat tctatcttaa atgatccaag
    24361 cacagtaaga gcaagctcaa atggggttga tagtggcaat gacatggcaa ataaaatcat
    24421 ccaacttcaa tatgaaaaag ttaattttta taatgaagat ggtactatcg ataatcttac
    24481 tatggaagaa tattaccgca aacttacagg taaaatagcc tcagatggtg aaaataacaa
    24541 tgttgtaaat tcaagcaatg aaactcttta taattctgtt tatagcgaat accaatctaa
    24601 aagtggtgta aatacaaatg aagaattagc cgctcttata caatatcaat caagttacgg
    24661 cgcagcagca aaaatcgtct caactgtaga tcaaatgctt gataccttac taggacttaa
    24721 atcttaagct ctagtaatat caagtgaaaa attttatcca tcttaaagcc aagcttgatt
    24781 ttttagccaa tcaaaaaaac accaatcatt ccctttttga aactccagat cctttgcaaa
    24841 ttgctaaaat tcacaatgat gaatttactg ccttaatttg tgctttattt gcctatggaa
    24901 atgctaaaaa tatagtaaat tttctaaaaa aacttgattt ttctttatta aaccttcaag
    24961 aaaaacaaat aaaaaaagaa cttaaaaatt taaaataccg cttccaaaat gagaaagata
    25021 tacaagaaat ttttatcact ctttcaagac tgaaaaatga aatttcactc tacgaacttt
    25081 tttatcaagc ctatgaaaaa agagaaaata ccacagatgc catcttagct tttatacaaa
    25141 aaatcaaaac cttaaattca tattcaagtt atgggtatga ttttttcttt ggaaaaattt
    25201 ggcaaaacac ccctaattca cctcttaaac gctataatat gtatctaaga tggatggtta
    25261 gaaaagatga acttgatctt ggacttttta ccaaaattca caccaaagat cttttaattc
    25321 cacttgatac acatacacat aaaatttcct tgaccttagg acttctaaag cgtaaaatat
    25381 atgattataa aagtgtttta gaactcacgc aaaatttaaa aaaattagat gcaaatgatc
    25441 ccataaaata tgactttgca ctctatcgtt tagggcaaag taaggaaaga caaatttaag
    25501 gagtgaaaaa tgggctttga gcacttagat acaatttatt acttcatact tttttttgta
    25561 gctctttttg ctggttttat agattctatt gtaggtggag gagggcttat tactctacca
    25621 gcactcatag cctgtgggat tcctgcgcat ttatctttag caacaaacaa actccaaagc
    25681 gtctttggtt cttttacggc tactttaact tattttaaat ccaccactct acctcatctt
    25741 gcttggggtg ttttttctac agccttagga gcagctatag gaagctatag cgttcttttt
    25801 gtaaaagatg agcaattaaa gcttattatc ttaatctttt taactcttac tttcttatat
    25861 acagccttac gtcctaactt aggcaaacac gaaagcgaac ctaaaataaa aaatatcaaa
    25921 atttttcatt taatttgtgg cttaacttta ggattttatg atggattttt agggcctgga
    25981 acgggttcat tttggatttt tgcttgtgtg atgctactag gttttaatat gagaaaagca
    26041 agcattaata ctaaaatttt aaatttcact agtaatatca ttgctcttgc tatattttta
    26101 tggcaatacg aacttttatg ggctgtaggc ttgcttatgg gcgtaggaca agttttagga
    26161 gcttatttag gctcaaaact tgtattaaaa actaatggaa agtttataaa aactttattt
    26221 ttaatcgttg taggagctac tatcattaaa gtagcttggg attattttag ttaaaattga
    26281 tccctgagct aagctcccac ataggtaaaa atatacctaa agccaaaaac aaaactaaaa
    26341 gcgccacaaa taaagtcatc ataggctcta aaaaaatcaa aaatctatcc attaaatttt
    26401 cacttttttg ttgataatat ttggcaattt cttcacttaa cacttcaagt cttccgcttt
    26461 tcatcgcaac actaagcata gaaaatacca aagaatcaaa aatatcaatc tttttaaaag
    26521 cctgacttaa ctcaaga
//
LOCUS       DARATF010000008        26385 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.008, whole genome shotgun sequence.
ACCESSION   DARATF010000008 DARATF010000000
VERSION     DARATF010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26385
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.008"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..254)
                     /locus_tag="SB502_000284"
     CDS             complement(<1..254)
                     /locus_tag="SB502_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433777.1"
                     /translation="MKKKILYIVVFFVVLILALFIVLKNGIVISSIQFDFLKLEQLYI
                     KLDKKLIVRAKNITINETQNSEISSQTHSSDNASTEILKIT"
     gene            169..1170
                     /gene="mltG"
                     /locus_tag="SB502_000285"
     CDS             169..1170
                     /gene="mltG"
                     /locus_tag="SB502_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEG0433778.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSNIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLGLDKDILLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1251..1682
                     /gene="flgB"
                     /locus_tag="SB502_000286"
     CDS             1251..1682
                     /gene="flgB"
                     /locus_tag="SB502_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEG0433779.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDKKELELAVTEEGHQKPWKFPDPGKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1692..2186
                     /gene="flgC"
                     /locus_tag="SB502_000287"
     CDS             1692..2186
                     /gene="flgC"
                     /locus_tag="SB502_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEG0433780.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2193..2489
                     /gene="fliE"
                     /locus_tag="SB502_000288"
     CDS             2193..2489
                     /gene="fliE"
                     /locus_tag="SB502_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEG0433781.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2496..4286
                     /locus_tag="SB502_000289"
     CDS             2496..4286
                     /locus_tag="SB502_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEG0433782.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDACLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNN"
     gene            complement(4301..5932)
                     /locus_tag="SB502_000290"
     CDS             complement(4301..5932)
                     /locus_tag="SB502_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HEG0433783.1"
                     /translation="MTNLGIGFKVFSGDLLEKILAKSTDTKIKSILFGTLSTLIIQSS
                     TLVSIITISFLSAGLISLGTGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIG
                     VLFFFQKDSVLKGLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVF
                     LGLGALLTGVIQSSTVIMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTN
                     IEGKKLAFASCIFNFGIAFLIVLIFPYFIHFLNFLSIVLNIEDIALKVALFHTLFNLI
                     GVVLFSFFTPQIVLFLNKIVKAPKDKNKDKPLYLDSSLVKFSDTAIEALRKESEHLYN
                     NTYAIVAHAIGFSRKDIQSDKSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFS
                     TKAQVYINDETKNHKIFTFKMAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKI
                     RSNLGELLRSIEELRVVEDREKLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKIT
                     TAEGISILNDTTFAAKIAEELIGAVEVIFSKDISN"
     gene            complement(6075..6509)
                     /locus_tag="SB502_000291"
     CDS             complement(6075..6509)
                     /locus_tag="SB502_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433784.1"
                     /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDERTLLEPIKMDIYPKF
                     CDLIDEKIREFKENIQNANLTLKNSNQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMDEFEKLKG"
     gene            complement(6509..6826)
                     /locus_tag="SB502_000292"
     CDS             complement(6509..6826)
                     /locus_tag="SB502_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEG0433785.1"
                     /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILSNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLAL
                     KGY"
     gene            complement(6823..8649)
                     /gene="htpG"
                     /locus_tag="SB502_000293"
     CDS             complement(6823..8649)
                     /gene="htpG"
                     /locus_tag="SB502_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEG0433786.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEINDANK
                     EEQGTSITLYLKDDEFANTYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKAEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLVAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8722..9090)
                     /gene="crcB"
                     /locus_tag="SB502_000294"
     CDS             complement(8722..9090)
                     /gene="crcB"
                     /locus_tag="SB502_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEG0433787.1"
                     /translation="MLNTLLVVGFGGFIGAILRMLSINLVNKFFPYSISFGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYFNFALN
                     IILNVFLCLFAAWLGFLIFK"
     gene            complement(9084..9776)
                     /locus_tag="SB502_000295"
     CDS             complement(9084..9776)
                     /locus_tag="SB502_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEG0433788.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVIFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDEKWLENTRKKM
                     QELLDQERVKLC"
     gene            complement(9757..10953)
                     /locus_tag="SB502_000296"
     CDS             complement(9757..10953)
                     /locus_tag="SB502_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEG0433789.1"
                     /translation="MKILLTLIFSIVVLFARGEISVFSGQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLSNKDFSHLVASSLEIKKVKASYFDDANIIMMVELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKNSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYALWFLAVLFGVLFVWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10950..11597)
                     /gene="purQ"
                     /locus_tag="SB502_000297"
     CDS             complement(10950..11597)
                     /gene="purQ"
                     /locus_tag="SB502_000297"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HEG0433790.1"
                     /translation="MKVAIIRFPGTNCEIDTAYAFEKLGVKTQIVWHEEKEFDADLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQSLRVVSNDNAFLKNFKKDEIISLPIAHGEGNYYADETTLKELQDKDL
                     IILKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDVGLKMLKGFLS"
     gene            complement(11599..11844)
                     /gene="purS"
                     /locus_tag="SB502_000298"
     CDS             complement(11599..11844)
                     /gene="purS"
                     /locus_tag="SB502_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEG0433791.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSVIEDYELVIEKE"
     gene            complement(11853..12563)
                     /locus_tag="SB502_000299"
     CDS             complement(11853..12563)
                     /locus_tag="SB502_000299"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEG0433792.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12565..13899)
                     /locus_tag="SB502_000300"
     CDS             complement(12565..13899)
                     /locus_tag="SB502_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEG0433793.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            14026..14316
                     /locus_tag="SB502_000301"
     CDS             14026..14316
                     /locus_tag="SB502_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HEG0433794.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKIVLKEHLAHCMVHAIEENDIQSIEELNKAIDMFMK"
     gene            14428..17001
                     /locus_tag="SB502_000302"
     CDS             14428..17001
                     /locus_tag="SB502_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0433795.1"
                     /translation="MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALSVDN
                     ASILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(17029..18960)
                     /locus_tag="SB502_000303"
     CDS             complement(17029..18960)
                     /locus_tag="SB502_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEG0433796.1"
                     /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTAALGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDIAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKVNMKFNESEIIF"
     gene            complement(18957..19508)
                     /gene="maf"
                     /locus_tag="SB502_000304"
     CDS             complement(18957..19508)
                     /gene="maf"
                     /locus_tag="SB502_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEG0433797.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITQQVGNLSTALGLDIQTLKAYL"
     gene            complement(19508..22036)
                     /gene="alaS"
                     /locus_tag="SB502_000305"
     CDS             complement(19508..22036)
                     /gene="alaS"
                     /locus_tag="SB502_000305"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEG0433798.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYVYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDIVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELFMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDVGWVMLENTPFYATSGGQSADSGFIAKREVL
                     DTQKFFNLNLSFIKAGEELKVNDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            22151..23224
                     /locus_tag="SB502_000306"
     CDS             22151..23224
                     /locus_tag="SB502_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEG0433799.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGTKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRTLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVD
                     INLSNYNLDFEAVQKAITPKTKAVIVVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFS
                     AYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23229..24095
                     /locus_tag="SB502_000307"
     CDS             23229..24095
                     /locus_tag="SB502_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEG0433800.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSD
                     AYKVQEILERFA"
     gene            24092..25003
                     /locus_tag="SB502_000308"
     CDS             24092..25003
                     /locus_tag="SB502_000308"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEG0433801.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFD
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLAK
                     CDYDLITCPNDSDEFIHFILKYLPDFN"
     gene            complement(25063..26298)
                     /locus_tag="SB502_000309"
     CDS             complement(25063..26298)
                     /locus_tag="SB502_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEG0433802.1"
                     /translation="MNAINSSFIVLCTLLVLLMTPALAMFYSGMVRSKNTLNTIMNCF
                     IVFGVITLQWVVLGFSLSFGKDEGLGLVGNFENFLLEGISGYNASGVPNILFVIFQMM
                     FALIASAIITGSLVGRIKLGVLVIFLLFWSTLVYDVLAHMIWSSEGFLLKRGSLDFAG
                     GGVVHISSGVAGLVGALMVGARKSDDEDKNAHSIPYAFLGAILLFIGWLGFNAGSAGE
                     MNDVAINAFIVSIISAACGFLSWVVLEWLIYKKPTILGGLSGLVAGLVGITPACGYVD
                     IYASLVIGTLSSVFCYFGLSFIKYKLKWDDSLDAFSLHGIGGIWGGIATGLFASAKVN
                     PNVIAQNALGEGFFISGSLELLKEQIFAIVICVVLSALISFVIFKIISCFTDLRVKEE
                     VEQKGLDVSLHGEKAYTLA"
BASE COUNT         9383 a         4400 c         3684 g         8918 t
ORIGIN      
        1 gttattttta aaatctctgt tgaagcatta tcagaagagt gggtttgtga tgaaatttcg
       61 gaattttgag tctcatttat agtgatattt tttgctcgta caattaattt tttatctaat
      121 ttaatatata attgttccaa ttttaaaaaa tcaaattgga tactagagat gacaattcca
      181 tttttaagca ctataaacaa agctaatata agcacaacaa aaaatacaac aatatataaa
      241 attttctttt tcatacgcaa cttctttttg atatttattt tggggatttt ttattatcta
      301 actcagcctt taaaaagcaa ttctgtggta tttattcccc aaggttcaat ttctcaaatt
      361 ataacatatt taaagcaaaa taaatatcag atgagtaata ttgataaata tattttattt
      421 tttttaggac accctcaatc aggctggatc aacataggta caaaagattt aaatagagct
      481 gaatttctac ataaactcac tattgctaaa gcagcacttc aaaccattac tcttattcca
      541 ggagaaacaa gcgtaatctt tctagaacaa gcagccaaac aacttggact tgataaagat
      601 atacttttaa aagaatttca agctcaagct ccttatgatg aaggagtttt tttaccagaa
      661 acttataaaa tcccgaaagg cattacagaa aatctactca ttcaaatgct tttaaaccat
      721 gctgaaattt ccaataaaaa aacttctgag aaaatttttg gtgattataa tccaaaaaaa
      781 tggcaccaat atatcatcat cgcttctgta atacaaaaag aagctgctaa tgacaatgaa
      841 atgcctatag ttgcaagcgt aatttacaat cgacttaaaa aaggtatgaa acttcaaatg
      901 gatggaactt taaattatgg aatttattcc catgtaaaag ttaccccaca aagaataaga
      961 caagataata gctcttataa tacctataaa tttacaggat tgcctaaaga agcggtttgt
     1021 aatgtttctt tagctgctat tcgtgcagct atttttcctt taaagacaga ttatttatat
     1081 tttgtgcgtg ataaaaatac tggagttcat atttttagca caaatataga tgatcacaat
     1141 aaagccataa atttacaaaa aggaaaataa tttttgatat ttttatacaa aatagttaaa
     1201 ttggaacagt atttgcttgt taatattaaa aattataaaa aggataaaaa atgattaacc
     1261 catttaaatc aaaagaacta gtcactggtg ctttagcggg tagaaatcta agaaatcaac
     1321 tcatcaatgc caatcttgca aatgttgata ctccttttta taaagcaaga gatattgaat
     1381 ttgaaacagc tttggtaaat cgtgcaaatg aaattttcaa aaaaaatgac aaaaaagaat
     1441 tagaattggc agtaaccgaa gaagggcatc aaaaaccttg gaaatttcct gatcctggta
     1501 aatctactat ttacttaaga gatggtcatt tggcaagaaa tgatgcaaat actgttgatc
     1561 tagatgtaga aactacagaa atgagtaaaa atacagttat gataacagct cttgatggag
     1621 ttttaagaag acagagcaat atctttagtt ctatacttga tgcaagctct aaattaagtt
     1681 aaaggtaaat tatggcatac ttaagtgatt ttgatattag tggttatggt ttaagtgctc
     1741 aacgttttag aatgaatgtt attagctcta atatagctaa tgcaaacact acaagaacag
     1801 ctgaaggtgg gccttataga agacgcgaag tgatctttaa agcaacagat tttgataagc
     1861 ttttaaatga gcaaattaac aaagataata attttttaaa atatgaaaat cctttaaatg
     1921 atccaagttc gccagaagaa gctaaacctg ctattcaaag tgttgtagtg gataaagtgg
     1981 tcagagatga caaagatttt cgtatgaagt atgatccaag ccatcctgat gcaaatgctg
     2041 aaggttatgt agcgtatcca aatgtaaacc ctgttattga aatggcagat ttgattgaag
     2101 ctacaagagc ttatcaagcc aatgtaagtg cttttacaag tgcaaaaact atagctcaaa
     2161 gtgcgattga tttattaaga ggataataaa aaatgaacaa tattaatgat ttaagattaa
     2221 ataataatat ttcaaatacc aacaaaagtc aaaattccac aggaattggt gatgaatttg
     2281 ccaagatgct taaaaatgaa atcgatgatt taaataaagc acaagaaagt ggagaagctg
     2341 caatgacaga cattgccaca ggacaagtaa aagatttaca tcaagcagct atagctatca
     2401 ctaaagctga aagcagcatg aaatttatgc tagaagtaag aaataaagcg atcagtgctt
     2461 ataaagaaat cacaagaact caaatttaaa ccctaatgca agaatataaa aaaaataggg
     2521 tttcaaaagt tgcctttgcc tactgcatgg cacttttgtt tatgattatt tttatcagct
     2581 ctactttttt tcttacatca aaacgtcata tacctaacac tgaaaaagat caatacgctc
     2641 ttgctctaag aggatcgatt ataaccaaag ataattttac tatcacaagt tctaaacaaa
     2701 tttatcgtgc tgaaattgat cttagaagca ttaacaaaga taaatttgat ctatttttaa
     2761 agctttttca aatttatagt gggataagta acgatcaagt agcagatatt aaaaaaagaa
     2821 tgcaaaatca aaaaaaacgc tcttataatt ttgttctttt acaaaactta gactccaagc
     2881 aagcaagcta ccttaaagat cttgctaaaa aactttatat acaaggtttt ttcaaagctt
     2941 ttacaaataa ctcaggaaga gttgaaacaa gaggattaaa tatcatcgaa catgaagaag
     3001 atagaattta catgtcaaaa gattctttta ctcctattat cggttatact aaaatgatat
     3061 tagatccaga aagtggaatt ttaaaaaata taggagttaa aggtttagaa aaatactacg
     3121 atgcatgtct aagccctgtt caaaatgaaa aaattcaagg acttaaagat ataggtggaa
     3181 atattatttt aaatctaaat tcactacaac aaaaaaagat caatggttgt gatttatatt
     3241 taaatctttc tttaaaactg caaaaaagta tagagaaagc tatagatcaa agaaatgagg
     3301 atttaaaagc caatgaaatc atcgttgggg taatggaaag taaaacagga agaattttag
     3361 ctctagcaag ctcaaggcgt tatgacccac aaaatcgcgg aaaggatcta tcagttctta
     3421 atgcaagcgc tatagaatac ggctatgaag caggttctgt tatcaaacct tttatcttta
     3481 caacagcctt aagacttggt aaaataaaaa tggatgaagt gattaatact tatggcggtt
     3541 cttacaagct aggacgtttc accatcaaag acgatcacaa aatggacaaa atgactatgg
     3601 aggaagttat aagatattct tcaaatatag gcatgataca aattgctaaa agacttaaca
     3661 atatagaaat cgtatcaggg cttaaaatat ttaaatttgg cgaaaaaagt ggtattgatc
     3721 taccctatga acaaaaagga gaaattccaa atcctaagcg cttaagagat atagaaaaat
     3781 ctgttttaag ttatggttat ggacttaaaa caacctttat acaactcctt gcagcttata
     3841 atgttttcaa caatgatggg ttttatatca caccacgttt agctgaaaaa ttctatcaaa
     3901 atggacgctt tacaaatctt gatgatgatg taaaaaaaga aaaaattctt tctagcgaag
     3961 ccgctaaaac gatgcaaaat gttcttataa atgttataga aaaaggaaca ggaaaaaagg
     4021 caattacaca aggtattatt gcaggaggta aaacaggaac ggcaagaata gccgaaagac
     4081 aaggttacac ctcaaatcgc tacaatgcat ccttttttgg ttttgcaaat gatttaaatc
     4141 acgcctatac cataggagtt ctcgtaagac atcctactaa accttatagt tattatgctg
     4201 cacaaagtgc tttgcctatg tttaaagatg ttgttgatat tttaatcaat gaagaatttc
     4261 taacgcctat acaagacaat aactaaacta gcacaaacaa ctagtttgat atatctttag
     4321 aaaatatcac ctcaacagca cctataagtt cttcagcaat cttagcagca aaagttgtat
     4381 cattaagtat tgaaattcct tcagctgttg tgatttttct tactgaaata agatgttcaa
     4441 cattgctcaa ggttaaagta tcgatttctt ttaaaatttc ttttcctttt tgaagatttt
     4501 taataatcaa ataaagcttt tcacgatctt caacaactct aagctcttcg atacttctta
     4561 aaagctctcc taaattcgat ctaattttat tgtactctaa agccaaaaat tcattagaag
     4621 aactagaata tttcttaata tttgcttgga taatttttaa atttttagtt gtttcggcta
     4681 aatttttagc tgccatctta aaggtaaaaa ttttatgatt ctttgtttca tcgttaatat
     4741 aaacttgtgc tttagttgaa aaatcgataa tagcttcaaa aagaaccttt atcctagttt
     4801 gatacaaata gtccaaatcc acatttttac taaaccactt tttattttct aaaatttctt
     4861 taaaactttt atcactttgt atatctttac gactaaaacc tatagcatga gcaacaattg
     4921 cataggtatt gttataaaga tgctcgcttt ctttccttaa agcttcgatg gctgtgtcac
     4981 taaacttaac caaactacta tcaagatata aaggcttgtc tttattctta tctttaggag
     5041 cttttactat cttatttaaa aaaagaacaa tttgaggagt aaagaatgaa aaaagcacaa
     5101 caccaattaa attaaacaaa gtgtgaaata atgctacttt caaagctata tcttctatgt
     5161 ttaatacaat ggataaaaaa ttaagaaaat gtataaaata aggaaaaata agcactatta
     5221 aaaaagctat accaaaatta aaaatacaac ttgcaaacgc taatttcttt ccttcaatat
     5281 tggtacttaa agaagctaaa acagccgtta caactcctcc aacactagta cctaaagttg
     5341 ctgctaagga attttccaaa ctgatttgtc ctgcaagtaa agcagcgaca ataatagcca
     5401 ttataactgt gcttgattgt ataactcctg taagcaaagc acctaatcct aaaaaaacaa
     5461 aaactccttt aaaaccagca aaatcaaaac gagaaagatc aattatatgt ttaaaatttt
     5521 caaaaccact tttaatataa tccacaccca aaaagaaaaa tcctatacca ataaaaatat
     5581 tacccaaacc ttttaaaaca ctatcttttt gaaagaaaaa taatactcca ataatcaaaa
     5641 gtgggatagc tagcattgaa attttaatat ttgtcaaacc aacaatcagc caagagcttg
     5701 ccgtatttcc taaatttgct ccaaaaataa tccctatgcc cgtacccaaa gaaataagcc
     5761 ctgcactcaa aaaagaaatc gtaataatag aaactaaagt tgaagattga ataattaaag
     5821 tacttaaagt accaaaaagt atacttttta tctttgtatc ggttgacttc gctaaaattt
     5881 tttcaagcaa atcaccacta aaaactttaa aacctatacc taaattagtc attccaataa
     5941 agaaatattg ccactcctgc taaaagatta gcaagctcgt cataacgaat taaaataaaa
     6001 atcagaacta aagtaaaaat acttcatgaa ataaatttaa aatattttaa agaatttcct
     6061 tcttcttgca atgcctaacc ttttagtttt tcaaattcat ccatcagaaa ttctcttaaa
     6121 ttttcagctt cttcttcgcc tttttctaga tactcaagca ataaattttc taattctttt
     6181 aaaaaagaaa aaagttcatt ttgccagata ctatcgtttt tattgctcaa attcatggtt
     6241 tgtatgaaag tcaactctct gcttaaatcc ccaagttttt ctaaaaattc atctttttga
     6301 ttagaatttt ttaatgttaa attagcattt tggatatttt ctttaaattc tctgattttt
     6361 tcatcgatta aatcacaaaa ttttggataa atatccattt taataggctc taaaagagtt
     6421 cgctcatcta tatttaaagt aagcttttta acagcaaaat aaagagctaa aaaagacaaa
     6481 gctgctataa gtaaataaat tcctagcatt aataaccctt aagggctagc attccgccat
     6541 ctaaattgat gctttcaagt cccaattttt cagctataaa ttcagctgca accatgcttc
     6601 tatggccact acgacaaata aaagcaagtt ttttactttc atctcttttg ctttgaaatt
     6661 catctaaaaa tttagcattt aaaagccctt gattatcata taaagccaca cattgcgcat
     6721 tagataaaat accttcttcc cattctaaag gagtacgcac atcaaaaatt tgatatgcgt
     6781 tcaaatcttg ctttgtccaa agacttgcag ggatattttc tatcatgaaa aagccttatt
     6841 gataattttt gtaaggcttg cattaaattc agcaggatta tccactccca taccttcgct
     6901 tagttttgcc atatttaaaa ctagggttgc tatatctgca ctaaaacttt cgttgttttt
     6961 aagacctgta aaaatagcgt gttttggatt gatttctaaa ataggtttga aattttgttc
     7021 ttgacccatt tgttttaaga gttgttgcat agcaaaatca ggtttatttt tatcataaac
     7081 tatacaactt ggactatctt ttaaacgact ggttagtctt acatcttcaa cttgatcttt
     7141 taaaagttct ttaaatttag ctacaagtgg agcaaaagta tttttttctt catcgcttag
     7201 ttcattttta tcttctactt gattaatggc tacaaatttt aaaccttcaa attctagcat
     7261 aggagttacc aaagaatcaa tctcatcatc catgagtaaa acttctatat ttttttgttt
     7321 atactcttca agcaaaggag aggttcttaa taaactttca ttatttcctg ctatataaaa
     7381 aatttccttt tgctcgcctt gaaggtcatt tttatactct tctaaagagc gtaaattttc
     7441 acctttggta cttttataaa gcatgagttt taaaagactg tctttttctc cgccaaaacc
     7501 ataaagtcct tcttttaata ccttaccaaa ggttttaaag aaagataagt atttttcttt
     7561 atcattgttt ttaagttttt caagttcacc taaaatcttt ttaacgctag cttctttaac
     7621 accttttaaa atttgatttt cttgtaaaat ttcacgactt acattaagtg gtaaatcttc
     7681 tacatcgata atcccccgca caaaacgcaa ataagttggt aaaagttctt tatcgtcatc
     7741 gctgataaat acgcgtttta cataaagttt taagccactt tgataatcca cacggaataa
     7801 atcaaaaggt gcgttttgcg gtatgaaaaa taaagaatta tattctaatt ttccttcact
     7861 tttagtgtga agataaagta aaggtttgtt tgaatcatga aaattttgct cataaaatct
     7921 ttcataatct tctgctttaa ggcttgattt ttgcattctc cataaagcat tggctttatt
     7981 gatttgagaa attttaagtt cagtttttcc ttcttcttct ccttctttag caggagtaaa
     8041 ttcttctttt tccatgaaaa ttggaaattg aatatgatta gaatattttt ctataatgct
     8101 ttcgatttta taagtattag caaactcatc atcttttaag tataaagtaa tgcttgttcc
     8161 ttgttcttct ttgtttgcgt cattaatctc ataaccattt gcatcagaac tccaaagata
     8221 agctttatca tctaaagctt ttttgcttaa aacttcgatt ttactagcca ccataaaagc
     8281 agaataaaaa cctactccaa attgtcctat gagttgagaa tcttttttag catcaccact
     8341 taaattttct aaaaaacttt tagtaccgct ttttgctatg gttccaaggt tgttaataag
     8401 atcatcttta tccataccta taccattatc actaatgctt aaagtttttt tatctttgtc
     8461 aattttgatt tcaattttag gttcgaattt taagctttta tatttatcat cacttacgct
     8521 taaaaaatta agtttgtcta aagcatcgct tgcatttgaa ataagctctc ttaaaaaaat
     8581 ttctttatta gaatataaag aatgtatcat aagctgtaaa agctgattga cttcggtttg
     8641 aaattgcatt ttaatttcct ttgtaatttt ttaaagtggt attttagcaa aaaatacaaa
     8701 ttctaaagta aatttaaaga tttatttgaa aattaaaaag ccaagccatg cggcaaataa
     8761 gcaaagaaag acatttaaga tgatatttaa cgcaaaatta aaataatttc cactttgcaa
     8821 aagaagtaaa ttttgataag aaaaagtaga aaaagttgta aaagctccta aaaaacctgt
     8881 acttataaag cttttaagca aaggagataa acctttattt tgtgcataag aaaacaaaag
     8941 tcctatgata aaagaaccca aaacatttac aaaaagagtt ccaaaactga tagaataagg
     9001 aaaaaattta ttcactaaat ttatagaaag cattcttaag attgctccta taaatccccc
     9061 aaaaccaact actagaagag tatttagcaa agcttgactc tttcttgatc gagtaattct
     9121 tgcatttttt ttctggtgtt ttcaagccat ttttcatcat ttgtatcgac taaatccata
     9181 caaatgattt taagtactcc gctgcttgcg ctaaaacttt ttgtgtctaa aatttttgca
     9241 gaatccacaa ttaaaatagg ttgaacttta agatttaatt tttcacttaa aatttttgct
     9301 ccactttgaa atttaagcat tttttcattt ttagatctag ttccttctgg aaaaatagcc
     9361 aaaaccctat cttcactaat tctttctttt gcttctttta aaactcgtac caaatcacgt
     9421 ggattttttc tatctataca aagaagtttt ggttttttca tagcaacttt gaaaatagga
     9481 atttctccta attctttttt ggcaatccag cataaatttt taggatataa ttcttctaaa
     9541 gcgatgatat ctaaagcact ttgatgattc attaaaatca tctgagcttg cggattaaaa
     9601 gtaccaatga tttcttgttt ataagagata gtatatcttt gaaatttagc ccaaattttg
     9661 cggattttcc aaagtgtgtt ttgagatttt gtaaagcaaa aacaaaaaat caccaaagca
     9721 acacttaaaa caaaaaaaat ccaaaaataa agagctttaa tttttttgta aatcatcttt
     9781 attaacccaa cctatttttc catcagaaaa cagtacttta atataatttt gtcttttgcc
     9841 caaaacttct actttttcat ctgcatttgc cgtataaaaa taagttgaag gctctgtagg
     9901 taaaatttta gccctagaac cagccttgat aattgcattt tgagtattgg tatctacaag
     9961 aaaactaagc gcaaaacaaa caactgccaa agccagaata atgtaatttt ttctccatac
    10021 aaataaaact ccaaataaaa ccgctaaaaa ccacaaagca tattgtttat aaatatttaa
    10081 gtctttattt acaggattta aatcactctg agtactaatc tcatcgtcac taatttttaa
    10141 ttttaaattt atattttcaa gctttttact gttcttattg aaatacgaaa attcaaaatt
    10201 tgttttactt aatggcaaaa tagcataata aaaagcacta gaagcattaa agtctccttt
    10261 taaattttca ataccttgct tttgaattcc ttctataaaa aagcttttaa gatttgtatt
    10321 ggttgcgttt agttctacca tcataatgat attagcatca tcaaaataac tcgctttaac
    10381 ttttttaatt tccaaagaac ttgccacaag gtgtgaaaaa tccttattgg ataaagtatt
    10441 ttcaaatttg ataggattaa gattgatatc agcctcttga aaagcttcat tatttctaag
    10501 aagtttgata gaaattttac tcaaactagc atttgaattt ttggcttcaa accataaagt
    10561 tgttttatat tcattgttga taaattccca ttttgcatct ggatttaaaa aagataaatt
    10621 agttttttct acgcttatgt taaaatcaaa ttttgtattt tccgtagtgc gagcatagat
    10681 cgtaatagga aaaacttctc caacatatac tctacttgga tattcatcat ttgtaagaac
    10741 caaactccct ttggctacaa aaggatcatc tacattgctt tcaaagtcat tgttttcatc
    10801 acttggcgga atattttgat aaattttttg ttcttcttgg ggtaattttt gtaattcttt
    10861 ttgcatattt tcatcttggc cgctaaatac agaaatttca cccctggcaa acaatacaac
    10921 aatgctaaaa attaaagtta ataaaatttt caagataaaa agcctttaag catttttaaa
    10981 cctacatcat tacctagaac tttttcacaa gcacgctcag gatggggcat aagtccaaag
    11041 atttttttgt tttcatcaca aattcctgcg atatcaaata cagaaccatt tggatttggc
    11101 tcgtatttta gaataataag atctttatct tgcaattctt ttaaagtagt ctcatcagcg
    11161 taataatttc cctctccatg ggcaattggt aaactaataa tttcatcttt tttgaaattt
    11221 ttcaaaaagg cattatcatt agaaaccact cttaaacttt ggttttttga gataaagcta
    11281 agattgttgt tatgcttcat tgcacctttt aaaagaccac tttcaagtaa aatttgaaaa
    11341 ccattacaaa tacctaagat atatcctcct ttttttgcat gattaaaaac accttgcata
    11401 gcaggagcaa gttttgcaat agctgcgcat cttagataat ctccataaga aaatcctcct
    11461 ggtaaaacaa ctaaatctgc atcaaattct ttttcttcat gccaaacaat ctgcgttttt
    11521 actccaagtt tttcaaaggc ataagctgta tcaatttcac aatttgtccc cggaaatcta
    11581 ataatagcaa ctttcatttt actctttctc aattacaagc tcataatctt caatgacgct
    11641 atttaccaac aactcttcac acattttttt tacttgttct ttggctaatt tttcatcttt
    11701 ctcatcaaga gaaattttga tttgttttgc tatttttact tctttaacac tattaaaatt
    11761 taaagaatgc aaagcttttt ccaccgcttt accttgtgga tctaaaaccc cattttttaa
    11821 agaaatattt acaataactt ccatattttt ccttaattta atattctttt taaaacttct
    11881 tcataagcca tttttacatt acctagatct tgacgaaatc tatctttatc taatttttca
    11941 ttgctaaatt tatcccaaaa tctacaacta tcagggctta tttcatcagc taaaacaagc
    12001 tcattatctt tagttaaacc cagttcgatt ttaaagtcaa tcagccttaa atttttatta
    12061 tcaaaaaatg gagttaaaat agagttaatc tttctagcca tatttttaat ttcactaatt
    12121 tgagcttcat tttgcactaa atttaaaatc aaacaatgct catcattgat aaaaggatcg
    12181 cctaaggcat catctttaag acaaaattcc accaaagcaa aaggtagcac agtgccatct
    12241 ttaatgccca gtctttttgt aagagaacct gttgcaacat tgcgtactat aacttcaata
    12301 ggaacaattt tacatttttt aaccacttgt tctgtatcgc ttatagtttc taccaaatgg
    12361 gttttaatcc catttttttc gagcaaatga aaaatttcag tactgatttt acagtttaat
    12421 gcaccttttc cactttcatt gcctcttttt tctgcattaa aagcagttaa atcatcttta
    12481 aactcactaa ttagtaaatt ttcatcatca gttttgaaaa gttttttacc ttttccttcg
    12541 tagagcattt ctttttttgt cattttattg tccttgtttg atatttaaaa ttttaatagt
    12601 atcaatagcc gattttaact gtgcgtcatc attgatttgt ttttgactga ttagattttt
    12661 attgtcttta ttttcttgtt tatcttcttt tttattttta tctatttttt caagctcact
    12721 ttctaaatgt tgttttaagt cgctttcttt tatagaaaaa ccatcttctt gagtatttac
    12781 tttacctgga aaaacttcaa tatcaggttt tacacccact gcttgaatag tacgtccgct
    12841 tggaagataa tatcttgcga tagtaagcct taaagcttca gttttattaa taggtatgat
    12901 ttgctgaaca ctaccttttc caaaagtatt ttcacccaca ataacaccgc gtttaagatc
    12961 ttgtaaagct ccacttacga tttcacttgc actagcactt ccaccattta caagcacaac
    13021 caaagaagca ttagaaattt tgtttttagg atcggcttta tattcttgat tttcacttgc
    13081 gatgcgtcct ttttgagaaa caataacacc tttatctaca aataaattta caagtcctat
    13141 ggcttgattt aaaagtccac caggattatt tctaagatct aaaataactc ctttaacatt
    13201 aggatatttt ttaagttctt tacttgccac atctacaaca tttttatcaa aatttgtaac
    13261 cctaagataa agaatgtttt cattttctat catttttgca taaacacttt ctatcttaat
    13321 aatttctctt gtaagtgtaa catcaaaagg ttttgttgca ccttttctaa aaatggttaa
    13381 agtgatttga gtttttggct taccacgcat tttatctaca gcatcattga gattaattcc
    13441 taaagtggcc tcatcattaa tttttaaaat aatatctcct gattttatcc ctgctttatc
    13501 tgctggtgtt ccttctatag gagaaacaac tgttaaagca ccatctttca tacctacggt
    13561 tataccaagg ccgccaaatt caccattagt ttgaattttc atatcattaa aatctttttc
    13621 atttaaaaaa gaagaatgcg catcaagatt gcttaaaagc cctgataaag atttatccac
    13681 caaatcgctg atattttgat catccacata gtattgctct actatagcaa gagtttttgt
    13741 aagcttatct aaagcttcta ggcgtttttg aacctgctct tctttttgat caactttagc
    13801 ttgtaaatga cttgttaaaa atagacataa aatgaaagta gtagcaaagc ctgcaagacc
    13861 cgcaaaaaat cgttttgttt tcaaaataag ctccatcatt gagttttagt ttaattagtt
    13921 taaagagtaa attttaataa aaattgctta aaacttcgta aataaattta aattcttaaa
    13981 aatatgttaa aatagactaa aaattccaaa aagaaagtta atacaatgtg ccaagaaaaa
    14041 catactcata cacattctca aaaacatctt aaagcagttt gcaatcgtct aagtagaacc
    14101 atagggcatt taagcgctat taaaagaatg gttgaaaatg acaaagactg tagtgaaatt
    14161 ttaatccagc ttgctgccgt aaaagccgaa gttaacaata ctgcaaaaat agttttaaaa
    14221 gaacatttag ctcattgtat ggtacatgct atagaagaaa atgatattca aagtatagaa
    14281 gaattaaaca aggctataga tatgtttatg aaataatcta aaattagtca tttgtcctat
    14341 tatttaaaaa attttactca attaacttga cattatatga ctaaagttat ataatagcaa
    14401 gtatataaac taaataaagg ataaaacatg gcaaatatac aagatttttt aactgataat
    14461 atgctttcaa atcttgaaag tgcagcatct ttagctatac attctaaaaa taatgaagtt
    14521 gtacctttac atcttttatg ggctttaagc gtagataatg caagtatttt aaatcaaatt
    14581 ttaaataaat taaatatttc taaagaagcc ttagagcttg aaattaaaag cagaatttca
    14641 aaacttgcaa cgagttcaaa tgtaaaccgt gaaaatatac gcttttccaa tgaacttata
    14701 aattcattag aaaatgctaa aggattaatg agtgctaatg gagatagtta tttaagtgtg
    14761 gatacttggc ttataagtga aagtcaaaaa agtcctatta aagaaatttt ggcgcaattt
    14821 ttagatttaa gagaatttca aaaagagctt gaaagtctaa gagcgggacg caaaatcgat
    14881 agcaaaacaa gcgatgaaac cttagacagc ttaaataaat ttggtataga tttaacctta
    14941 aaagcaagcg agggtaaact tgatcctgtt ataggcagag aagaagaaat cgaacgtttg
    15001 atgcaaattt taatacgcaa aaccaaaaat aaccctatac ttttaggtga accaggcgta
    15061 ggaaaaacag ctatagtaga agctttagca caaagaatta tcaaaaaaga tgttccaaaa
    15121 tctttgcaaa ataaaaaagt tatcgctctt gatatgagtg ctttaattgc aggtgcaaaa
    15181 tacagaggag aattcgaaga tagattaaaa gctgtggtta atgaagtgat aaaaagtgaa
    15241 aatatcattc tttttatcga tgaaattcac actatagtag gagctggagc gagtgaaggc
    15301 agtatggatg cggcaaatat tttaaaaccc gctcttgcaa gaggtgaact ccataccata
    15361 ggcgcaacta ctttaaaaga atatcgtaaa tattttgaaa aagatgcagc cttgcaacgc
    15421 cgttttcaac ctgtaaatgt aggtgagcca agtgttaatg aggctttggc tatgttaagg
    15481 ggtataaaag aaaagcttga aattcatcat aatgtaacta taaatgatag cgctttagta
    15541 gctgcagcta aactttcaaa gcgttatata gcggatcgtt ttttacctga taaggccatt
    15601 gatttaatcg atgaagctgc agctgaactg aaaatgcaaa ttgaaagcga accaagttct
    15661 ttaagaaaag tacgcaaaga tatagaaact ttagaagttg aaaatgaagc tttaaaaatg
    15721 gaaaatgatg aaaaaaatca aaaaagactc gatgaaatcg caaaagaact agctaattta
    15781 aaagaaaaac aaaatgccct aaattcacag tttgaaaatg aaaaaagtgt ttttgatggc
    15841 ataagtgcta agaaaaaaga aattgatctg cttaaaaatg aagcttcttt ggctaaagct
    15901 agaggtgaat ttcaaaaagc agccgagcta gagtatggaa aaattccaag tcttgaaaaa
    15961 gaagtagaaa ttttagaaga taaatggaaa aaaatgagtg aaaatggagt tttacttaaa
    16021 aatcaagtgg atgaggattt ggttgctgga attttaagca aatggacggg tattagcgtg
    16081 caaaaaatgt taacttctga aaaacaaaaa ttcttagaag tggaaaaaca tttaaaagaa
    16141 agtgtcatag gacaagataa ggccttaagt gctttagcta gagccattaa acgtaacaaa
    16201 gcagggctta atgcggacaa taaacctata ggaagctttt tatttttagg gccaacaggg
    16261 gtaggaaaaa cacaatcggc taaagctttg gcaaaatttt tatttgatga tgaaaaagca
    16321 atgattcgct ttgatatgag tgaatttatg gaaaaacata gtgtttcaag actcttaggt
    16381 gcgcctccag gatatatagg acatgaagaa ggtggagagc ttactgaagc cgtacgaaga
    16441 aaaccttata gcgtgctttt gtttgatgaa gttgaaaaag cacataaaga tgtatttaat
    16501 gtgcttttag ggattttaga tgatggtaga gcaaccgata gcaaaggtgt aacagtggat
    16561 tttaaaaata ccattatcat tctaacttct aatatcgcct caagtgccat tatgaattta
    16621 agtggaaaag aacaagaaga tgcggtaaaa aatgagttaa aaaatttctt taaacctgag
    16681 tttttaaacc gtttagatga tattatcacc tttaatccac ttggaaaaga tgaagcttat
    16741 gaaatagtca agcttttatt taaagattta caaatgagct tagaaaacaa gggaataaaa
    16801 gcaagtttaa gcgaaaatgc agccctttta atcgctaaag atggttttga ccctgatttt
    16861 ggtgctagac ctttaagaag agctatttat gatcttatag aagataaatt aagcgatatg
    16921 atacttgctg atgaacttca tgaaaatgat agcattatca ttgatgcaaa agatgatgaa
    16981 ataatcatca aaaaagctta atcattttga aagtagatct ttctactttc aaaatataat
    17041 ctcgctttca ttaaatttca tatttacttt tggtaatggt gatttggtgg tataataagc
    17101 actttctcct ttataatttc cacgataaac tccattagga atgctaaatt ttctagttgt
    17161 atcagggaat ttttctatat attgagttaa aaattctcta aacacaggag cagctgttct
    17221 agccccacct tctgtataac gcataggttt gttgttatca tttccatacc aaatgattgc
    17281 ttctatttca ggcgtaagtc cacaaaacca agcatcaaca cttttattcg ttgttcctgt
    17341 ttttcctgct atttctatat cttttactct tgcattacgc cctgtgcctt tttcaacaac
    17401 atttctcatc atatctaaaa ccagaaaact ttgcgcttca tcgctgactt tacgctcatt
    17461 tgagttaaat tccatgatgg ttttaccggt tttatcctga acttgtctga taatttgagg
    17521 atctttaatc gtaccatagt tcccaaacat ggtataaaat ttcgaatact ccaaaggaga
    17581 aataccaaaa cttcccaata cgattgataa attaggcggt atatctttaa atccaaattc
    17641 cattagttta gagtaaagaa catcaagccc catatcaagt gcgagattaa tggtagctaa
    17701 atttcttgat cttgttaaag cttcttttaa ggtaattaaa cctaaaaatt tacccccttc
    17761 atttttaggt ttccaatcct cattattacc cgctccacct tcaaaaattc tagaaatatc
    17821 agcaatttca ctcataggcg aatatcctaa attaatcgcc acttgataca caaaaggttt
    17881 aaaagagctt ccaggttgac gcatactttg agtagcgcgg ttataattac ttttttcata
    17941 atcaactcca cctaccaaag ctaaaacatc accactttga tgatttacca cgaccatagc
    18001 tccgttcaaa gtgcttaaat ttgcatcttt atcgcgtttt actatctcat cataaccaaa
    18061 ttttaaagca ttctgtgcca tattttgaac atctaagtct atatttaaaa tgattttata
    18121 tccacctgtt tttaagtctt tgatattagg gcttaattgt ttaatcactt catctacgac
    18181 ataaggagca gcattttgag taagcgtatc atcataaact tgcggaattt ctttaatggc
    18241 tatatcataa tctgcttttg aaatccaacc tagattatac attcttgaaa taacattatt
    18301 tgctcttgaa atggaaagat ctaaatgctt tgtaggatca taactgctag gtgcttttgg
    18361 catacctact aacatagcaa tctctttaag gcttaattca tttaaatttt tatgaaaata
    18421 ccccaaagct gcggttttta ctccataata cccatgtcca aaaaaaataa aatttaaata
    18481 cctttctaaa atttgctctt tagttaaaat ggtttccatt ttataagcaa gcaaagcttc
    18541 gcgaatttta cgcgtaatag ttctttcagg ggttaattcc gtgtttttaa taaattgctg
    18601 ggtaagagtg gaagctcctt ccatggtttt tccaccgctt tttatgattt ttacagcagc
    18661 tctaaaaatg gcatcgatat taactccatt atgttcaaaa aagcttgtat cttctatagc
    18721 aaccaaagct tctataaggc gtggaggaag ctcttcataa ggagcgtaaa aacgatgttg
    18781 ttcaaaaata ttagccacaa gcttgccatt tctatcgtaa atttgtgttg taagaggagg
    18841 tttgtattct ttaaaagtat aaccctcagt atcagcactt gtgaaaagat aagccacata
    18901 aataaatcca gctataaaca aaagagtaaa aaatgaaaaa atatatttta atattttcat
    18961 aaataagcct ttaaagtttg gatatcaagc cctaaagcag tgcttagatt tcctacttgt
    19021 tgggtgatga aattttgatg aaaaccctca cacataatac aacccgcctt gcctttataa
    19081 agatcatttt ctacataatc tcttaaagca ttttcatcaa aatttttaaa ataaagtgta
    19141 gtttttgaaa gagaaaaaac tcttttttca ggttttacaa gcaaaaaagc cgataaaata
    19201 cttgcatact ttccattttg caaggcaagc atttcataag cttctttttt atcctttgct
    19261 ttggtaagaa ttttttcatc tatacaaact atactatctg caaaaagcaa attttggttt
    19321 tgaaaatctt tgcctaaagt acttaaaaat tgtctttctt tttcaagaac tattttttga
    19381 acatataaaa aaggtgaaat atttttattt aaattttcat cataatcaaa actaacttgc
    19441 ctaaaatcaa tctttgcggt tttaagcaag ttagctcttg aaatggaact tgaagcaaga
    19501 attaacatta aagtgctttt tctatcgttt ctaagctttg ttttaaagct tcattgattt
    19561 tgcttaaatc ttttccacct gcagtagcaa aatcatctct tccgccacca tttccaccta
    19621 aaatttgcgc cgcttcttta accaaagctc ctgcttttaa aggcacatct ttaacgccag
    19681 ctgctaaagt gattttttca tcttttactt ggataagtaa aatcaccgct ttagcaaatt
    19741 tgtttttaaa atcatcaatc atagctttaa tatcgccatt atctatacgt tttacgcaaa
    19801 tttcaacacc ttggatattt ttagaatcaa gctcggtttt acttgaattt ttaagctcat
    19861 tttttaaact taaaatttca tttttaagct ttttaatccc gcttaaaata tcattatttt
    19921 taagttcatc ttttacttta gaaagttctt cgagttgatt ttttacaaat tctaaagccg
    19981 ctttagaaac cacagcttca atacgtctaa ctccagcact cacaccactt tctttaacta
    20041 tgtaaaaact tcctatttga gcagtatttt taacatgagt tcccccgcaa agttctttgc
    20101 tttcacctag agttaaaaca cgcacattgc cttggtattt ttcattaaac aatgctatag
    20161 caccgctttt tttagcttct tctaaaggca tattttctaa gatagcttcg cttgagttta
    20221 taatcatttt attgactctt ttttcaatgc tttctagctc ttctttgttt aaagctttat
    20281 gatgagtaaa atcaaatctt agtttattgc tttcaaccaa agatcctgct tggcttacat
    20341 gagaacctaa aatttctctt aaagcatgat gtaaaagatg agtggctgag tggtggcgtg
    20401 cgatttgctc tcttttttct gtatcgattc ttgcatgaac tatatcgtta acttttagtt
    20461 cttcgcctgc ttttataaag ctaagattga gattaaaaaa cttttgcgta tctaaaactt
    20521 cacgcttagc tataaatcca ctatcagcac tttgcccccc acttgttgca taaaaaggtg
    20581 tgttttcaag catcacccaa cccacatctt taagggtgga aacttcttta aaatcttcat
    20641 ctaaaagggc taaaatttta ctttcgcatt ctgctttttc ataacctacg aaatgatttt
    20701 ctccaaattt ttcaagtaag tttttaaaat ctccgcttgc agttttatct ccacttcctt
    20761 tccaagaagc cttagcgcgt gctttttgct cattcatgaa aagttcaaat ttttcttcat
    20821 caactttaag atttttttct cttagcatat cagccgttaa atcaagcgga aaaccataag
    20881 tatcataaag cttaaaggct acttctccgc taaaaatttc tttagtgttt ttaagctctt
    20941 cattaaaaat ttcaatccca ttttctatag tgcttaaaaa tctttcttct tcaaggcgaa
    21001 tttgttcttt tataaagtct tttttctcat taagataggt ataatgtccg cccattaaat
    21061 cgcacacaat atcaactagt ttatacataa aagcttgttt aaaacctagc aaatatccat
    21121 gtcttaaagc acgacgcaaa atacgacgca aaacataacc tctaccttct ttatcaaaac
    21181 ttaccccttg tgcaagcaaa aatacacttg atcttatatg atcagctatg actctaaaac
    21241 ttgctccgct ttcataaaca taagttttat tacaaagttt tgaaatttca ttgatgattg
    21301 gcataaaaag cgagctatca aaattgctaa atttaccttc tttaatcgct gttacccttt
    21361 caagccccat tcctgtatca atgcttggct ttggcagtgg gctaagcact ccatcagcac
    21421 ttctttcgta ttgcatgaaa acaagattcc agatttctaa aaatctatct ccatctccgc
    21481 ccatataatc ttcgcttgag ttaaaatgct cttgtccttg gtcataaaaa atctcactac
    21541 aaggaccaca aggaccagta tcgcccattt gccagaagtt atctttatcg ccaaatttgt
    21601 aaattctttc tttttgaatg tgtttttgcc atagattaaa agcttcatca tcgttttcat
    21661 gcacggttac ataaagtcta tctttaggta gttttaaaac ttcagttaca aattcccaag
    21721 cataagctat ggcttgttct ttaaaataat ccccaaaact aaaattccca agcatttcaa
    21781 aaaaagtatg atggcgtgcg gtatatccta cattatctaa gtcattgtgc tttccacccg
    21841 ctcttataca agtttgacag cttgttttgc gtggagggtt tgggcgtgga atttctcctg
    21901 taaatatact tttaaaaggc accatacccg cattagtaaa aagtaaagtt gcatcatcag
    21961 gaactaaagg acttgacggg gttatctcat gtccttttga tgcaaaaaaa tccaaataag
    22021 cttttctaat atccatgaat tttcctaaag aaatttttat aaaaacatat cataccaaaa
    22081 ttactttaaa ttaagtaaaa ctaaaataca ataaacattt ttatttaatt ttatttctct
    22141 aaggtttttt atgaatttta tcaatcttca agcccaatat ctcgcataca aagatgaaat
    22201 caatgctgaa attgaaagcg ttttatcaag ctcttctttt ataggcggta caaagcttaa
    22261 cgaatttgag caaaatttag ctcatttttt aggtgttaaa cacgctatag gttgttcaag
    22321 tggaaccagt gctttatatc ttgccttaag aaccttagat attggcaaag atgatgaagt
    22381 tatagtgcct agttttactt tcatagcaac agctgaagtt gtggccttgg taggtgcaaa
    22441 acctgttttt gtagatataa atttatcaaa ttacaatctt gattttgaag cagtgcaaaa
    22501 agcaataact ccaaaaacta aagctgttat agtagtgagt atgtttggac aaatgagtga
    22561 tttaagggct ttagaagaaa ttttaaaaga taaaaatatc actttgatcg aagatggtgc
    22621 acaaagtttt ggcgcaagtt tcaaaggaga aaaatcctgc tctatagcta aaatttcatg
    22681 cacaagcttt tttccttcga agcctttggg agcttatggc gatggcgggg ctattttttg
    22741 ccatgatgat gaaattgcta aaaaaataag aattttactc aatcacggac aaactcagcg
    22801 ttataaacat gaatttatag gtataaatgg acgccttgac accttacaag cagcgatttt
    22861 aaatgttaag ttaaaatacc tagaaaaaga attagacaaa agacaaaaat tagcacaaat
    22921 ttataatgca aatttaaaaa actgtcaaat tccacaaatt aatccaaatg cttttagcgc
    22981 ttatgcacaa tacagtgttt tagttgaaga tagagctagt gtattgcaaa aatttgaaaa
    23041 agctaatata ccttatgcta tacactatcc aacccctttg cataaacaac cttgctttag
    23101 tgagttttca aatttagaac ttaaaaattc agaatacgca agcgaacaca tcttatcttt
    23161 gcctttttca ccttttttaa gtgaagaaga gcaagagcaa gttatttgta tttttaaaga
    23221 ttgattccat gaaaataggt atcataggcc ttggaaaaat ggggcaaaac cacttaaatg
    23281 aacttagtaa aaattctcat tttaaactta atgcactttt tgatctttgc aaaaatccaa
    23341 acctaaatat ttttgatgat attttttatg atgatctgga taaattttta aatcaaaata
    23401 atgatattat catcatagca acacctacaa attcacattt aacaatagca aaaaaagttt
    23461 ttaaacaatg caaatgcgtt ttaatcgaaa agcctttagc tctaaattta aaagaaatag
    23521 acgaaatttc aaatttagct aaagaataca gcataaaagt aggtgtaggt ttttgcgaaa
    23581 gatttaatcc tgcggtttta gccctaaaaa aagagcttga aaatgaagaa attatcagca
    23641 ttaacataca aagattttca ccctacccac aaagaatcag cgatgtaggg attttgcaag
    23701 atttggctgt gcatgatctt gatttgcttt gttttttaag caaacaagaa ataacaaaaa
    23761 ccaatttgct taaaaaatac acccaagatc aaacaagaga aagtgaaagc attattctat
    23821 gtgagcttga aaaatgtatt gctagcatac atcaaagttg gaatagcaca caaaaactaa
    23881 gaaaaattca tcttattact aaaaatcatt tttatgaagc caatttaaat gacttttctt
    23941 tattaaaaga tggaaatttt atagaactta ctcaacaaag tccacttttt tcagaacacg
    24001 aagctttgtt aaaacttatc gataatcaac ccaatcattt agccagcacg agcgatgctt
    24061 acaaagttca agaaatttta gaaaggtttg cgtgaaatta gttttatttt taaatatggg
    24121 cggagctacg aatttacaag attgtgaagt ttttttaaaa aatatgttta atgatcctta
    24181 tattttagga atcaaaaatc gatttttaag aaaatttgta gcatggatca taacaaaggc
    24241 tcgcgttaaa gccatgcaag aaaactataa aaaaatgggc ggaaaatccc ctttaaacga
    24301 acttactcaa agcctgtgtg acaagcttaa tttaaaacaa gatgaattta aatttgattt
    24361 tgtaaatctt tatgttcctc cttttgccac agaaattttg caaaaataca ctttaaatgc
    24421 aagtgatgaa atcattcttt ttccacttta tccgcaccat tcttgcacca cagtaacttc
    24481 atctttagaa gttctgcaaa atgaaatttc aaagcaaaaa attcaagcaa aagtaaaaac
    24541 tatagatatt ttttacaaaa atgagcttta taacgagatg atagtttcgc acattttggc
    24601 taaaaaaagt aaatttgatg ccaaaatttt gattttttca gcgcattctt taccacaaag
    24661 cattattgat aaaggtgatt tatatgaaaa gcatgtaaat gatcatgtag aaattttaaa
    24721 agaaaagcta aaagatcatt ttgatgaatt tattttagct tatcagtcta aactaggccc
    24781 tgtaaaatgg cttgaaccaa atacaagcga tgttttggca aatttaaacg ataaagctct
    24841 gatttaccct atttcttttt gcattgattg ttctgaaacg atttttgagc taggtatgga
    24901 gtataaacat ttagcaaagt gcgattatga tttaatcact tgcccaaatg atagtgatga
    24961 atttatccac tttattttaa agtatttgcc tgattttaat taagaatgat tttgaagtcc
    25021 ttgtttatga ttacaaggac tttttagtaa aaatttagcc aactaagcta aagtataagc
    25081 tttttctccg tgcaaactca catctaagcc tttttgctct acttcttctt ttactcttaa
    25141 gtctgtaaaa caagagataa tcttaaaaat aacaaagctt ataagagctg acaaaaccac
    25201 acaaatcaca atagcaaaaa tttgctcttt taaaagttcc aaacttccgc tgataaaaaa
    25261 tccctcgcca agtgcatttt gggcaatcac attaggattt actttagcac ttgcaaaaag
    25321 ccctgtggca attcctcccc aaatacctcc gattccatgt aaagaaaagg catctaaaga
    25381 atcatcccat ttgagtttgt atttaataaa acttaaacca aaataacaaa acacagaaga
    25441 caaagtccct ataacaagag aagcataaat atctacataa ccgcaagctg gagtaattcc
    25501 cacaagccct gctacaagcc cactaagtcc acctaaaata gtcggttttt tatagatgag
    25561 ccactcaagt accacccaag ataaaaagcc gcaagctgct gatataatac ttactataaa
    25621 agcattgata gcaacatcat tcatttcgcc agcacttcca gcattaaaac ctaaccatcc
    25681 tataaaaagc aaaatcgcac ctaagaaagc ataaggaata gaatgcgcgt ttttatcctc
    25741 atcatcactt tttctagcgc ctaccatcaa agctcctaca agtccagcaa ccccagagct
    25801 aatatgcaca acaccgcccc cagcaaaatc aagacttcct cttttaagca aaaatccctc
    25861 actgctccaa atcatatgtg ctaacacatc ataaactaaa gtactccaaa aaagtagaaa
    25921 tatcaccaaa acacccagtt taattcttcc caccaaagag cctgttatga tggcagatgc
    25981 aataagtgca aacatcattt gaaaaatcac aaaaagaata tttggaacgc ctgaagcgtt
    26041 gtatccgcta ataccctcta agaggaaatt ctcgaaattt cctacaagcc caagtccttc
    26101 atctttacca aaagaaagac taaatccaag cactacccat tgtaaagtaa taacaccaaa
    26161 aacaataaag caattcatta tagtattaag agtattttta cttcttacca tacctgaata
    26221 aaacattgcc aaagctggag tcataagcaa aactagcaaa gtacacaaca caataaaact
    26281 tgaatttatc gcattcattt acctgtcctt tcttacaaaa atttaattgc gagataatta
    26341 tatttaaaat gatttaaaaa aatataaatt taagaaatat tttat
//
LOCUS       DARATF010000009        25245 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.009, whole genome shotgun sequence.
ACCESSION   DARATF010000009 DARATF010000000
VERSION     DARATF010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25245
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.009"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(172..1615)
                     /gene="aldA"
                     /locus_tag="SB502_000310"
                     /pseudo
     CDS             complement(172..1615)
                     /gene="aldA"
                     /locus_tag="SB502_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(1629..1946)
                     /locus_tag="SB502_000311"
     CDS             complement(1629..1946)
                     /locus_tag="SB502_000311"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEG0433803.1"
                     /translation="MQRYGQIIKIKKEKIQKYKNLHAKPYERVCEMIKECNIQNYSIY
                     LFGEYLFAYFEYVGADFEADMAKMARDENTQKWWKVTDPCQISLGYAGQKWLNMEEVF
                     HLD"
     gene            complement(1947..2717)
                     /locus_tag="SB502_000312"
     CDS             complement(1947..2717)
                     /locus_tag="SB502_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEG0433804.1"
                     /translation="MQKIFDAHLHLWDLGKIPISWMKDDEKLEQNYDFFRMKQEYKEF
                     EFIGAMYVEVNSDDLEKEILFALEQKKLHNLLLCLADLKHKEKLNSFREVMHVSKKGA
                     KRLFEVDFEEKIEILKTFNIPFEACMKNEELSFLENFLNKNSNLKVVLNHLGSPKINR
                     LNEYKKDLNLLKKFPNLYIKLSTPDDFSQETPKEFIFELFAFLKENFSEDKFIFGSNY
                     PVSNLSPKQWIELIIQSKVFKDLDLIFYKNALSIYKGE"
     gene            complement(2701..3957)
                     /gene="fucP"
                     /locus_tag="SB502_000313"
     CDS             complement(2701..3957)
                     /gene="fucP"
                     /locus_tag="SB502_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HEG0433805.1"
                     /translation="MTDSKNIKIAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQH
                     ESGFLQFAYFGAYFIIALPAGYIANRFSYKMGIIFGLALYAIGALLIIPATNLASFHL
                     FLFAFFILACGIGSLETSANPYMTKLGDEKNASFRINAAQSFNGLGQFVGPIIGGALF
                     LSITKQEEGASKEQIEAALVANMGNVQLVYIGIAVIVILILIAFVANKLPEGSAVSDD
                     YKQKDDSKPIYVFKHRHFNLGLLAQFLYIANQVAAGAFFINYVVEHNEGLKDAQGAYY
                     FSIALVAFMLGRIVSTPLMKIIKGEKILGFYSLINVLICLSLYFVSGFFSIVLLIALF
                     FFMSISFPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPIIIGFINDHYGTGTGYL
                     AIAPLFLYVAWYGFIGSKVRKNAKDF"
     gene            complement(3968..4756)
                     /locus_tag="SB502_000314"
     CDS             complement(3968..4756)
                     /locus_tag="SB502_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEG0433806.1"
                     /translation="MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKE
                     HDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKHGGIYALVNNAGTNDNLHIENTS
                     TQDLIKSYENNLFHYYTMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
                     MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRF
                     TTIEEIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEN"
     gene            complement(4757..6043)
                     /locus_tag="SB502_000315"
     CDS             complement(4757..6043)
                     /locus_tag="SB502_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004314306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0433807.1"
                     /translation="MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSH
                     IEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMI
                     FIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKAYGIYQMGVPIAFVFGS
                     LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDIL
                     LKHIEISNTKAKDYSIKDIFKSILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINV
                     GFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLASLSMIASTFVTNLAA
                     FLFFISLTAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIE
                     NHFGVEFGLIVLALIAILGVLVLIHLKITLNLDKGE"
     gene            complement(6055..7221)
                     /locus_tag="SB502_000316"
     CDS             complement(6055..7221)
                     /locus_tag="SB502_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEG0433808.1"
                     /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAV
                     YINHQHGCSQLEFDALQTRDVLIGHGSNANVFGVLIIGLGCEVIQAKAVAEKIKEATP
                     YKKVEYLVIQECGGSKNTIENGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSY
                     SGLSANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILAY
                     ENLVKSFHADIRGANPSPGNMAGGLSTIEEKSLGCVYKAGTKTLMDVIDYAKPVVSKG
                     LTFMNTPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDA
                     IDINAGSIIDGVKTKEEVRDELIELIVRISDGELVKAELNEQNDFSVWRLATTC"
     gene            complement(7224..7487)
                     /locus_tag="SB502_000317"
     CDS             complement(7224..7487)
                     /locus_tag="SB502_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEG0433809.1"
                     /translation="MKGYIIVNEKDNVATALRDFKKGEKVANIELLNDIASGHKFALK
                     DIKKDEIIIKYAEAIASASCDISTGEWVHIHNTAGIRGRGDKE"
     gene            complement(7484..8392)
                     /locus_tag="SB502_000318"
     CDS             complement(7484..8392)
                     /locus_tag="SB502_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEG0433810.1"
                     /translation="MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCN
                     GSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGITSTIYENTFILAQKAYELGLDAL
                     LLAMPYYYKLSEDALFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVG
                     IKDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGAKGSMTSIGGVFPELMSEI
                     YKSINEKNIGRALLIQKSLLKAIRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPAT
                     KEELNTRFDEAKELIKTIEKETGIKL"
     gene            8622..9383
                     /locus_tag="SB502_000319"
     CDS             8622..9383
                     /locus_tag="SB502_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEG0433811.1"
                     /translation="MHQPTLRVLNILELLAKEKLTLSAIAKKLNIPAGTLWPILQTLQ
                     EKKYIKCDLKNKSYYLDFKIIELGCNIKNENNIFEIIKKHMKNIRNLTNQTCQMGILK
                     DGNVLYLEKIDANNTVQLKSFIGTSYPAYATSLGKALLSNKNKKELEKLYPKNFDKIT
                     ENTLNNINELYQQIKQIKKEKIAIEIGEMNPQIECMAIGIEHKNKIIAAISISYLIYC
                     SNKAFREKNKKILLEEKNKIEKVLKIYFNDLDTLY"
     gene            complement(9414..13967)
                     /gene="rpoC"
                     /locus_tag="SB502_000320"
     CDS             complement(9414..13967)
                     /gene="rpoC"
                     /locus_tag="SB502_000320"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEG0433812.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMGAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIVKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(13960..18096)
                     /gene="rpoB"
                     /locus_tag="SB502_000321"
     CDS             complement(13960..18096)
                     /gene="rpoB"
                     /locus_tag="SB502_000321"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEG0433813.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKASLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSIPRLANEKEFIKSLSDEELLNYA
                     RDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(18205..18582)
                     /gene="rplL"
                     /locus_tag="SB502_000322"
     CDS             complement(18205..18582)
                     /gene="rplL"
                     /locus_tag="SB502_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEG0433814.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMIAGGA
                     AAGGAAAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(18603..19082)
                     /locus_tag="SB502_000323"
     CDS             complement(18603..19082)
                     /locus_tag="SB502_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEG0433815.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLGVSKVAAKFEENNDKFE
                     IKTAHIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(19234..19935)
                     /locus_tag="SB502_000324"
     CDS             complement(19234..19935)
                     /locus_tag="SB502_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEG0433816.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(19991..20416)
                     /gene="rplK"
                     /locus_tag="SB502_000325"
     CDS             complement(19991..20416)
                     /gene="rplK"
                     /locus_tag="SB502_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEG0433817.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(20442..20975)
                     /gene="nusG"
                     /locus_tag="SB502_000326"
     CDS             complement(20442..20975)
                     /gene="nusG"
                     /locus_tag="SB502_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEG0433818.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(20985..21164)
                     /gene="secE"
                     /locus_tag="SB502_000327"
     CDS             complement(20985..21164)
                     /gene="secE"
                     /locus_tag="SB502_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEG0433819.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVVVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(21183..21258)
                     /locus_tag="SB502_000328"
     tRNA            complement(21183..21258)
                     /locus_tag="SB502_000328"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21223..21225),aa:Trp,seq:cca)
     gene            complement(21271..21429)
                     /gene="rpmG"
                     /locus_tag="SB502_000329"
     CDS             complement(21271..21429)
                     /gene="rpmG"
                     /locus_tag="SB502_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEG0433820.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(21482..22681)
                     /gene="tuf"
                     /locus_tag="SB502_000330"
     CDS             complement(21482..22681)
                     /gene="tuf"
                     /locus_tag="SB502_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEG0433821.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(22750..22824)
                     /locus_tag="SB502_000331"
     tRNA            complement(22750..22824)
                     /locus_tag="SB502_000331"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22790..22792),aa:Thr,seq:ggt)
     gene            complement(22929..23005)
                     /locus_tag="SB502_000332"
     tRNA            complement(22929..23005)
                     /locus_tag="SB502_000332"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22969..22971),aa:Gly,seq:tcc)
     gene            complement(23012..23097)
                     /locus_tag="SB502_000333"
     tRNA            complement(23012..23097)
                     /locus_tag="SB502_000333"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23061..23063),aa:Tyr,seq:gta)
     gene            complement(23147..23222)
                     /locus_tag="SB502_000334"
     tRNA            complement(23147..23222)
                     /locus_tag="SB502_000334"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23187..23189),aa:Thr,seq:tgt)
     gene            complement(23338..24075)
                     /locus_tag="SB502_000335"
     CDS             complement(23338..24075)
                     /locus_tag="SB502_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0433822.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKDKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDKVLQEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFKNPKSERAKKFLNLFDYHK"
     gene            complement(24077..24733)
                     /locus_tag="SB502_000336"
     CDS             complement(24077..24733)
                     /locus_tag="SB502_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0433823.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISTIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWFFVVYFGFPRWFGWDLSSVSVAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(24726..>25245)
                     /locus_tag="SB502_000337"
     CDS             complement(24726..>25245)
                     /locus_tag="SB502_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0433824.1"
                     /translation="NTPLLIQLFFLYYALPKFNIHLEQIPPLNLICLSVEETLRPSFA
                     CAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMP
                     SISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSF
                     ILLKFEKRLLYA"
BASE COUNT         8224 a         5050 c         3230 g         8741 t
ORIGIN      
        1 taattattgt tttacttata aaaataatct tactcatttt agacaaaatg aaaaattcca
       61 aaattgattt taagaaatta ctaaaaaagt gtttaatcca tagttataaa gcatcatact
      121 tgattccaag attataataa ctcctatcta aaaatttaga taggataaaa atcattgttt
      181 attagtatta tactgcaaat ataccacatg ggtagctaaa tattcttcaa gaccatgttt
      241 tccatcagct ccgcctatgc cactttttct aaagcctgca tgaaaacctt gcatagcctc
      301 aaaattttca cgattaatat aagtttcacc aaatttaatt tctctgctag ctctcattgc
      361 tatatctaaa ttttgtgtat aaatagaact tgtaagacca tattcacaat catttgccat
      421 atcaatagct tcatcaagtg tatcaaattt agcaataggc aaaatgggag caaaaatttc
      481 tttttgcata atttcatcct catgcttaac attagtaaga acacttgcag gaaaataata
      541 cccacttgta tcagtgattt ttccaccgca ttccacaact gctcctttag ctgtagctct
      601 ttgaagcatt gctaaagcat tatcaacccc tgcttgattg accaatggtc ccatatcaaa
      661 atcacctttt aaggtatttc caacacttac cttactcatg gcttttacaa atttatctac
      721 aaattcatca taaatgcttg tatgcacata agctctttcg gcacaattac aaacctgtcc
      781 attattgcaa attcgacttg ccttaatcgc ttctactgcc aaatcaatat ccgcatcttt
      841 acacactata gcaggagctt ttccgccaag ttctaaagaa acctttatga tatttttagc
      901 tgcagcttcc attactctag cccctgcttc aacacttcct gtaagactta ccatgcctat
      961 attttcattg cttgataatt catatcctac tacactacct ttacctgcaa ccaaattaaa
     1021 cacacctttt ggtaaagaac tttgcgaaac aagttttgca aattcaaaag cattgtttgg
     1081 agtttcacta cttggcttta tcactatggt atttcctgtt agtaaagcag gtgccatctt
     1141 ccttgcgatt aagaaaaatg gaaaattcca aggtaaaatt ccaccaatta ccccaatagc
     1201 acttttatat atataaatat atatgctcat tagctctatc gctttgtatg atttcacctt
     1261 catatcttct agcccattcg gccgtataat ccatataatc tgctgcaaaa ttaacctcca
     1321 cgctggctaa agctctagtt tttccttgct cttgcattaa aatttctgtt aagaaattag
     1381 catttttgcg tattaaacta gctatttctc ttaaatgatt tgctctctca attgctggct
     1441 tagtctccca ggatttttgt gcttttttgg ctgcttcaat cgctcttttg gcatcttcta
     1501 aagaagcact cgctactttt gaaattactt ctttagtagc tggatttaaa acttcgataa
     1561 aatccccatt atgtgagata aattctccat caatataatt taaataagtt gtcatttttt
     1621 ctcctttttt agtctaagtg aaacacttct tccatattta gccacttttg tcctgcataa
     1681 cctaaagata tttgacaagg atctgttact ttccaccatt tttgcgtgtt ttcatctctt
     1741 gccatcttag ccatatctgc ttcaaaatca gcacccacat attcaaaata tgcaaataaa
     1801 tattctccaa acaaataaat ggaataattt tgtatattac attctttaat catctcacaa
     1861 accctttcat aaggctttgc atgaagattt ttatattttt gtatcttctc tttttttatc
     1921 tttatgattt gaccgtatct ttgcattcat tctcctttat aaattgataa agcattttta
     1981 taaaatatca agtccaaatc tttaaaaacc ttactttgta taatcaactc aatccattgc
     2041 tttggagaca aattagacac tggataatta ctgccaaata taaacttatc ctcgctaaaa
     2101 ttttctttta aaaaagcaaa aagttcaaaa ataaattcct taggagtttc ttgtgaaaaa
     2161 tcatcaggag tagaaagctt gatatataaa tttggaaatt ttttcaaaag atttaaatct
     2221 tttttgtatt catttaaacg atttattttt ggacttccta gatgatttaa aactactttt
     2281 aaatttgaat ttttatttaa aaaattttcc aaaaaactga gttcttcatt tttcatacaa
     2341 gcttcaaaag gtatattaaa agtttttaaa atttctattt tttcttcaaa atctacttca
     2401 aacaatcttt tagctccttt tttgcttaca tgcattactt ctctaaaaga attaagtttt
     2461 tctttatgtt ttaaatctgc tagacaaagc aaaagattat gaagcttttt ttgttccaaa
     2521 gcaaacaaga tttccttttc caaatcatca ctattaacct caacatacat agcacctata
     2581 aattcaaatt ctttatattc ttgtttcatc ctaaaaaaat cataattttg ctctaatttt
     2641 tcatcgtctt tcatccatga aataggtatt tttcccaaat cccaaaggtg cagatgagca
     2701 tcaaaaatct tttgcatttt ttctcacttt tgaacctata aagccatacc aagccacata
     2761 taaaaacaaa ggtgcgattg ctaaataccc agtgcctgta ccataatgat cattaataaa
     2821 gcctataatt ataggcataa tcgctccacc tactatactc atcacaagca aagatccgcc
     2881 tagttttact tgatttaaag gtaaattttt tgttgctacc gcaaaaatag taggaaaaga
     2941 aatagacata aagaaaaata aagctattaa aagcactatg ctaaaaaacc cgctaacaaa
     3001 atataaacta agacatataa gcacattgat tagagaataa aatcctaaaa ttttttcacc
     3061 tttgattatc ttcatcaaag gagtagaaac aatgcgtcct aacataaatg caaccaaagc
     3121 tatagaaaaa taataagcac cttgcgcatc ttttaaacct tcattatgtt ccacaacata
     3181 attgataaaa aaagctcctg ctgcaacttg attggctata tacaaaaact gtgctaaaag
     3241 ccctaagtta aaatgtctgt gtttaaaaac atatatgggc ttagaatcat ctttttgctt
     3301 ataatcatca cttaccgcac ttccttctgg aagcttattt gcaacaaaag caattaaaat
     3361 caaaataaca atgacagcaa ttcctatata aacaagctgg acatttccca tattagctac
     3421 caatgcagcc tcgatttgct ctttactcgc accctcttct tgtttagtaa tagataaaaa
     3481 taaagctccg cctataatag gtcctacaaa ttgccccaaa ccattaaaac tttgcgcagc
     3541 attgattcta aaactcgcat ttttttcatc accaagcttt gtcatgtagg gatttgcact
     3601 agtttctaaa gaaccaatac cacaagctaa aataaaaaac gcaaacaaaa acaaatgaaa
     3661 agaagccaaa tttgtagcag gtataataag caaagctcct atggcataaa gagctaagcc
     3721 aaaaatgatt cccattttat aagaaaatct attggctata taacctgcgg gtaaggctat
     3781 gataaaataa gcaccaaaat aagcaaactg taaaaaacca ctttcatgct ggctaatatg
     3841 aagatgattt tgaaaatttt tattcatcac atcaataagt ccatagctta ctccccataa
     3901 aaagaaaaga gaagttacca aaacaatagc tatttttata tttttagaat cagtcatttt
     3961 ttactcctta gttttcatcc caatttaatg ctctatctaa atgcacataa cctccatctg
     4021 gcattaaaat ttgccctgta gtatgtgaag caaggggact aagtgtaaaa accgctgtat
     4081 ttgcaatttc ctctatggta gtaaaacgat ggcctaaagg tatagctttt gcgatttttt
     4141 catattgctc tttaggatta ggaaaatttt gcagccattt ttcataaaga ggagtcataa
     4201 cttcagcagg agctatagca tttaccctaa cattatcctt agcaaaagca caagcccatt
     4261 ctctagtaaa acccatttga gccgctttgg ccgaagcata agctgaagtt cttccttgtc
     4321 ctgtgatgcc tgttttactc actatattta aaatactgcc ttgttctttt ttaatgtaag
     4381 gcaaacattc tttggtcata gtataataat gaaaaagatt attttcataa gattttatca
     4441 aatcttgagt acttgtattt tcaatatgta aattatcatt tgtacctgca ttatttacaa
     4501 gagcatagat tccaccatgt ttgatagcaa ctttttttac aagcttttca atttgctcat
     4561 aattttttaa atcaatttca taaaattcat actcactaga taattttttt aattctttat
     4621 cgtgctcttt aggcatagat cttgaaaaaa ttacaggaat tccgccttcg cttgcccata
     4681 atttagcaat accataccca atacctttag cccctcctgt aataatacaa accttatttt
     4741 taatttttaa atccatttat tctcctttat ctaaatttaa agttattttt aaatgtatta
     4801 ataccaatac acctaaaatt gctatcaatg ctaacactat aagtccaaac tcaactccaa
     4861 aatgattttc tatatatgtt tttaaagtag gagctacaaa acctcctaaa tttcccaagg
     4921 atcctataag agcaatagca gccgcggctc cttttccttt taaaacttga gttggcaaat
     4981 tccaaaatat aggctgaatg actataaaac ctatagcagt caagctaata aaaaataaaa
     5041 atgccgccaa atttgtaaca aaagttgaag ctatcatgct caaacttgct agcagtaaaa
     5101 ataaaatcgc atgtaaattc caagaatgtt ttttatcagc caatgaggta aatattggca
     5161 aggcgataaa aacaaaaatc caaggtatgg catttaaaag tccaacttca aaacctacat
     5221 ttatttgcaa tatttgggca attttacttg gtaaataaaa aagcactcca taaacactta
     5281 attgaataca aaaataaaca aatacaaatt tccacaccaa aatactttta aaaatatctt
     5341 ttatagaata atccttagct ttagtattgg aaatttcaat atgttttagc aaaatatctt
     5401 tttcttttat atctaaccat tttgcatctt ttggatgtga atcaagataa aataaacaaa
     5461 aaatacctac taaaacggta atacctcctt ctattaaaaa catccattgc caatttttaa
     5521 aatatatatt tggtgtataa tcaagtataa aaccgctaat taaagaacca aaaacaaaag
     5581 caattggaac tcccatttga taaattccat aagcttttga tcgatatata gctgggaaaa
     5641 aataactaag gtataaaata atgcctggac taaaacctgc ttcagttaaa cccaataaaa
     5701 atcttaatac ataaaaactt atttctcctt gtataaaaat cattgccata gttacaagtc
     5761 cccaagtgat cattatgcga cttaaccaaa tttttgctcc taatttatgc aaaaataaat
     5821 ttgaaggcac ttcaaaaatg gcataaccta taaaaaatat tccagcaccc aaagcataag
     5881 cagcctcacc gatgcctgca tcaatttcta tatgagattt cacaaagcta atatttgtcc
     5941 tatcaagcat agaaagacaa aacatcaaaa caatcaaagg caaaatacgc caagatattt
     6001 ttttacatac taactctaac tttattgaat ttgcatgttt catcacttta ccctttaaca
     6061 agttgtagca agtctccaaa ctgaaaaatc attttgctcg ttaagctcgg cttttaccaa
     6121 ttctccatct gaaattcgca cgattaattc tataagctca tcacgcactt cttcttttgt
     6181 ttttacccca tctataatgc ttcctgcgtt aatatcaata gcatcattca tattttcata
     6241 acaaaaagta ttagaactca ttttgatagt aggcacgata gcagaacccg ttggagtgcc
     6301 acgacctgta gtaaaaacac aaatatttgc tccacctgca accatagcac taagttgttc
     6361 tatatcattg cctggtgtat tcataaaagt taaaccttta gaaactacag gcttagcata
     6421 atcaatcaca tccattaagg ttttagttcc tgccttataa acacagccta aagatttttc
     6481 ctctatagta ctaagcccgc ctgccatatt tcctgggcta ggatttgctc ctcgaatatc
     6541 agcatgaaaa gatttgacta aattctcata agctaaaatc ttatcatata cctttttagc
     6601 tatttcatcg ttttttgctc tcttagctag tatggcttca caacctataa gttctgtagt
     6661 ttctgctaaa attaccgcac caccctcatc gattacaaaa tcactcaaac ttcctaaagc
     6721 aggattagca ctaagtccgc tatagctatc acttccaccg cattctgtgc ctaaaatcaa
     6781 atcactgaaa tctccttcac ttttttgtaa ttttgcagca ctttcaagca tttcattgac
     6841 tattttgata ccattttcaa tggtattttt actaccacca cattcttgta tcactaaata
     6901 ttcaaccttt ttataaggcg ttgcttcttt gattttttct gctactgctt tggcttgtat
     6961 tacctcacaa ccaagcccta taattaaaac accaaaaaca ttggcattgc tcccatgacc
     7021 tattaaaaca tctctagttt gtaaagcatc aaattcaagc tgggagcaac catgctgatg
     7081 gttgatataa actgctccat tacattttct agctatattt tcacacactt tattagcaca
     7141 atgtacactt ggtatgataa tgactttatt tcttaagcca aattttccat cttcccttct
     7201 ataacccatt atctttttca ttttcattcc ttatctccac gacctctaat tcccgcagta
     7261 ttatggatat gcacccattc ccctgtacta atatcgcaac ttgcactagc tatagcttct
     7321 gcgtatttga taataatttc atcttttttt atatccttta gtgcaaattt atgtccgctt
     7381 gcaatatcat ttaaaagctc aatatttgcc actttttcgc cttttttaaa gtcacgcaaa
     7441 gctgtggcaa cattgtcttt ttcattgact ataatatatc ctttcatagt tttatacctg
     7501 tttctttttc tatagtttta ataagctctt ttgcttcatc aaagcgagtg tttaattctt
     7561 cttttgtagc aggtgataaa ggatgaatac tagcatttac aaattcaaat cctctggcct
     7621 ttaaaagcaa agcaaaaccc ataggaaaag ctatgctcat accaaatctt atggccttta
     7681 ataaactttt ttgtattagc aaagctctgc ctatattttt ttcattgatt gatttgtaaa
     7741 tttcgctcat aagttctgga aaaactccac ctatgctagt catagaacct tttgcacctg
     7801 ctaataatgc acctacataa aattcttctc ttcctacaaa aacatcaaaa ttactaggta
     7861 ctacatctaa aatatgattt aaaagcaaag catctccgct actatctttt atacccacaa
     7921 cattatcaag ctttgaaacc ttttctataa attttaagct tagtgctggt gcaaaaagag
     7981 gtatattata aacatataag ggaagtttca cttcagaagc taaatatttt acatattcaa
     8041 aaagtgcatc ttcactcaat ttataataat aaggcatagc aagtaataag gcatcaagac
     8101 ctaattcata agctttttgc gccaaaataa aagtgttttc ataaattgtc gaggtaatac
     8161 ccgtgatgat aggtatatta ttttttgtag cctttttggt gagtttcatt aacttaactt
     8221 gctcttccac gctcaaagct tgagaatccc ctgcacttcc attacaaaac aatccgttca
     8281 agcctttaga aataccaaat tcacaatagc gaataaattc tttttcattg atacttccat
     8341 catctttata tggagtaagt aaagccggta aagttccttt taaaattccc atttttttcc
     8401 tttcgtatat acaaaaatat atttatatac aaaaaatata acaaaatatt tgtaaaaaaa
     8461 tcaagctgtt aacttggtaa aaattcgtat tttattctta ttaactgcca atttttacaa
     8521 aaaaatatta aaattaataa ataataaaaa ttatgatttt atgttactaa aagtaaaaaa
     8581 tatgctaaaa tttataaaaa taaaacaagg ataaagacaa tatgcatcag cccactctta
     8641 gagtgttaaa tattctagaa ttacttgcaa aagaaaagct taccttaagt gctatagcta
     8701 aaaaattaaa cattcctgct ggaactcttt ggcctatttt acaaactctt caagaaaaaa
     8761 aatatatcaa atgtgattta aaaaataaaa gttattattt ggattttaag attatagaat
     8821 taggatgtaa tataaaaaat gaaaataata tttttgaaat aatcaaaaag catatgaaaa
     8881 atataagaaa tttaaccaat caaacttgtc aaatgggaat tttaaaagat ggaaatgtgc
     8941 tttatttaga aaaaattgat gctaataata cagtacaatt aaaatctttt ataggcactt
     9001 cgtatcctgc ttatgcaaca tctttaggca aagccttact atcaaataaa aataaaaagg
     9061 aattagaaaa actttatcct aaaaattttg ataaaattac agaaaacacc ttaaataata
     9121 taaatgaact ctatcaacaa atcaaacaaa ttaaaaaaga aaaaattgcc atagaaattg
     9181 gagaaatgaa tcctcaaatt gaatgtatgg ctataggcat agaacataaa aataaaataa
     9241 ttgctgccat tagtatatct tatctaattt attgctctaa taaagctttt agagaaaaaa
     9301 ataaaaaaat acttctagaa gaaaaaaata aaatagaaaa agttttaaaa atttatttta
     9361 atgatttaga tacactgtat taatatagcc ccgaagggct ataaaataga gttttattct
     9421 tgttctttaa gttttaaatt ttgttcgcca taaagccctg ttccaacagg aatcattcta
     9481 cctagaataa cattttcttt taaatcttct aagtagtcaa atttacctgc tatacttgct
     9541 tcagttaaaa ctttggtagt ttcttggaat gaagccgcag aaatcacact atcacttcca
     9601 atcgctgctc ttgttacacc taaaagcaca ggctcggcaa tagctggttc tccacccatt
     9661 ctaatgattc tttcattttc ttcacggaat ttacgtcttg aaaccaaatc accttcaata
     9721 aatttcgtat gtccactatc tacaactttt acttgtctta gcatttgaga aacgataact
     9781 tctatatgtt tatcagaaat cacaacacct tgtccgcgat aaacttgctg aatttcagaa
     9841 atcaaataat aatgcaaggc tttttcacct aaaattttaa gcacatcatg actcgaaaca
     9901 actccatctg taagtttttc acctgcatga ataaactctc catctcttac ttgaatatgt
     9961 tttgatttgt cgattaaata ctcagcactt gttccatctt ctgcttggat aataattctt
    10021 tctttagaac gcaaaggctt atcaaaacga acaacaccat caatttctgc aatcacagcc
    10081 gcattttttg gttttcttgc ttcaaaaagt tcagaaactc ttggaagacc tcctgtaata
    10141 tcctttgatt tagctgctgc ttttggagtt tttgctaaaa tatctgcttg agcaatttta
    10201 tcgccatcat gaacaaaaat aacggttttt ggttcaaggt gataacgcac agctttatca
    10261 ccttttcctg caattaccaa agttggtcta actccgctag gtaaatactc attaattact
    10321 aaagaacgct tacctgtagc ttcatcaatt tgctcatcag cactataacc tgcttcaata
    10381 tcctcaaagc ttacaacacc atcaatttct gcaatgatag tattattata agcatcccat
    10441 tctgcaatca cttttctttc ttttttagga gcacttgcaa tgatagtatt tgcgtcatcg
    10501 attttttcac tatcgttaaa ttctatctta gattctcttg ggatatagtg tctttttgct
    10561 tctctatcat tttcatcagc aatcactaca aagaatcctt tttctttaac aatatcacct
    10621 tttttaacat tttttactct atctaaacca tcgcctttaa ggatgtaaaa tttgagtgtt
    10681 cctttttcgc ctgctttgat attttgaact acaggctcgc catcttctac taaaatttca
    10741 ctcgcaaaag gaatacgatt tggtacattc caaccctctt taatcacttc tacgatactt
    10801 tcattttctt ctacttgcat gccgctttga tatggcaaat aaagttttcc atctatactg
    10861 ccacttacac ctgctaattc atttggttta gcaagatcgt attttcttaa tatgtatttt
    10921 acttcttgtt ttttatcttt aatagaaaca atcacatctt catgaatatt ttctatatta
    10981 atcacacctt taaatggagt tttgattttt ggctccacaa gtaaaaccgc cgcatttcta
    11041 cgatttgcta cgatattttt accttctttg tttttataag ttttaagatt ataaaatctt
    11101 ataaaacctt ctttttgtgc gcttacttgt ctatcttgta aatccgtact tgcagttccc
    11161 ccgctatgga aagttcttag agttagctgc gttcctggtt caccgataga ttgagcggaa
    11221 ataattccca ctgcttcgcc tggttttact aatttacctt caccaagatt gataccataa
    11281 cattttgcac aaattccttt tttagctttg caggtaatag gagtgcggat attgacactt
    11341 tttataccgc tttcgccaag aatttttgct ttttcctcat ccattaaagt accttctgca
    11401 aaaagcacag aatttgtaat aggatcaatc acatcctcag ctaaaaccct gcctaaaatt
    11461 ctttcttcta aagtttctat aatagaacta tctgcggtaa tttcattgat ttcaacaccc
    11521 tcatgtgttc cacaatcttc aatggtaatt tttacatttt gtgcaacatc gatgagtttt
    11581 cttgtcaaat aacccgcatt tgctgtttta agagcggtat ctgcaagacc ttttctagca
    11641 ccgtgagttg aaataaagta ttcaagaaca tttagccctt cacggaaatt tgaaataata
    11701 ggcgtttcga taatagaacc atcaggtttg gtcataagtc ctctcatcgc agcaagctga
    11761 gaaatttgag ctgcactacc cctagcacca gaatctgcca tcatataaat agagttaaaa
    11821 ccttctttat ctttttctac aagcttcatc atttcttttg aaagaacatt gtttgtactt
    11881 ttccaaatat caatgatttt attgtatctt tcccctgaag taatcaaacc gagattataa
    11941 gaattttgaa tttctcttac ttgttttttt gcttcatcga tagctttttg tttatcatta
    12001 ggaacaataa tatctgcaat cgaaattgaa atacctgctt tagttgcata ttcaaaacct
    12061 aaatttttaa gtctatccaa gaaacttgct gtaatctcta aaccaccttg tttataaaca
    12121 taatccacaa gcgcagcaat gtcttttttc tttaagactt tattccaact attttcaggc
    12181 acaaaatcag gcaagatgga tttaacaatc aatcttcctg ctgtagtggt aatctttcta
    12241 ccatctacca tagtttgtat gctcgcatga atatccaaac acttgctttc aagtgccatc
    12301 atcacttcat caatgcctgt acaaatttta tgcgaacctt tagcacctgc tttttccaac
    12361 gaaagataat aaattcctaa aaccatatct tgcgatggaa cggttacaga cttaccgctt
    12421 gctggtaaaa gaatattcat tgatgaaagc ataagcactt tacattctgc aatagcctct
    12481 tgagaaagcg gtacatgcac tgccatttga tccccatcaa agtctgcgtt aaatgctgca
    12541 caaaccaaag gatgaagttg tatagcctta ccttccacta aaacaggatg aaaagcttgg
    12601 atagaaagct tatgcaaagt aggtgcacgg tttagcataa caggatgtcc ctttactacc
    12661 tcttctaaac attcccaaac ttcattggtt ttattttcta tcattttttt agcttgtttt
    12721 actgtggttg cataaccttt ttcttcaagc ttagctaaaa gatgtggctt aaaaagctct
    12781 aaagccattt ttttaggtaa accgcattga tccattctaa gttttggacc tacaacaata
    12841 acgctacgac ctgagaaatc caccctttta cctagtagat tttgtctaaa acgtccttgt
    12901 ttccctttga tgatttcact taaagatttc aatgggcgtt tatttgctcc ttttacagca
    12961 ttagcacgac gaccgttgtc aaaaagcgca tcaacagcct cttgaagcat tcttttttca
    13021 tttctgataa tgatttcagg tgcatcaagt tccataagtt ttttaagacg tgtatttcta
    13081 ttgataacac gacgatataa gtcattcaca tcagaaactg caaatttccc accatctaaa
    13141 gccactaaag gacgcaaatc tggcggtaaa actggaagat ttgtaatcat catccattca
    13201 ggacgatttg gtacagcttc gtcgctatcg gtattggcgt ttaaatttga atttaagaaa
    13261 ttttctacaa cttttaagcg tttaatgata gtttttttct tagcctctga atttgtagcc
    13321 cccatttctt ctttaagttg atttaaaagc gctacaagat ctaaatttgc aagtaaatca
    13381 cgaacaactt ctccacccat tcttgcttta aagccgctat tttcatagcg ttgcattaaa
    13441 ttttgatatt gctcttcgtt caaaacatcg caatattcca cttttttagt actttcatta
    13501 tcatagaaag catcacctgg gttttcaaca atataagctt cataataaag cacgcgctca
    13561 agatctttca tcttaacacc caaaagcgtt cctatacggc ttggaagaga attaacatac
    13621 caaatatgag ccacaggagt tacaagctcg atatgcccca ttctagaacg acgcactttt
    13681 gaatttgcta cttcaacacc acatttttca cacttaacgc ctttaaaacg catttttttg
    13741 tatttaccgc aaagacactc ataatctctt ataggtccaa aaatctttgc acaaaaaagc
    13801 ccatctcttt caggctttaa ggttctataa ttaatagttt ctggtttttt tacttctcca
    13861 taagaccatg atttgatttt ttcaggactt gcaagtctca gttgaaatgc ttcaaaatct
    13921 ctaggtcttg catcttcttt aatttctatt actttaaatt tactcattat cttcatcctt
    13981 atcaaaaatc tcaacatcta aagcaagaga tttaagctca ttggttaata caaaaaatgt
    14041 ttcaggaatt cctgttgctg gaacattttc accttttgtc aatgctttat aagcactaaa
    14101 tctaccttct acatcatctg attttatggt taacatttct cttaaagtgt gagccgctcc
    14161 ataagcttca agtgcccaaa cttccatttc tccaaatctt tgtcccccaa agagtgcttt
    14221 accacccaca ggttgttggg taaccaagct ataaggtcct gtacttcttg catgaacttt
    14281 ttcatcaacc aagtgatgga gttttagcat atacatacat cctacatgaa cacgctctgc
    14341 aattttttcc cctgttcgtc catcgtaaag ttctgttttg ccatccatat ctatcttagc
    14401 cattttaaaa agcttgctaa attcttctat atttacacct tcaaaaacag gagtagaaaa
    14461 tttaactcct ttactccagt ctctagcata gtttaaaagc tcttcatcgc ttaagctttt
    14521 aataaattct ttttcgtttg caagtcttgg aatagaacaa atttcaagca ttttcgctct
    14581 taattcttta agaaaatctt tttgctttct atcaaaaatt tcttgaattt gatccccaag
    14641 tctaagtcca actaaaccta aatgactttc taaaatttga cctatattca tacgacttgg
    14701 aacgccaagt ggattaagcg caatatccac gctcttacca tttggcaaat aaggcatatc
    14761 tacttcagga actatagttg aaactatacc tttatttcca tgacgtcctg ccattttatc
    14821 accgacttta agctttcttt ttgtagcaat ataaacttta acaagcttaa ttaccccact
    14881 tggtaaaata tcatcttttt ctaaaatttc aagcttttca tcgtgttctg cttttaattt
    14941 tttcttctca ttttggaaat gattttttaa atcatcgtat tctttttgaa tctctttaga
    15001 ataagcttta atcaaagttg ttaaagtaaa acgattgatt ttttcaagtt cgctaatatc
    15061 tgcagtttgt ccttttttat aatttttatc tccaattttt tgatcgctat ttaaagaggc
    15121 tttggaaaga agagcacaaa cacgaagcat ttcttctcta tccatcatca aaagtctatc
    15181 atgatgctct ttttctaaag ccattttttc tttatcataa gattttattg cgcgatcatc
    15241 tttttcatag ccttttttag tgaaaatttt aacatccaca acaacaccct ctaaagaagc
    15301 ggttgcataa agggatttat tcacaacatg tcctgctttt tctccaaaaa tcgctcttaa
    15361 aagtctttct tcaggagttg gtttaacctc accttttgga gaaaccttac ccaccaaaat
    15421 catacctggt ttgatatggg taccaatttt tgcaataccg ctctcatcaa gatgcgcaac
    15481 atcttcttct tttacatttg gaatatcttt ggtaatttct tctataccgt cttttagttc
    15541 tcttgcttca atttcttttt cataaatgtg cacgcttgta aaagtatctt cacgaataat
    15601 tctctcactt acaactatag catcctcata gttataacca ttccaaggca taaaagcgat
    15661 taaagcattt ttacctatag caagttcgcc ttgatccata gaaggaccat ctgcgataat
    15721 ttgtcctgct tttactatat cacctttttt aacaataggg tgttgaatat aatttgtatt
    15781 ttgattggtt cttaaatttt tctccatagt gtaatggtca ataaatggac ctttatcatc
    15841 ttcacctaaa atgaaaatgc ttttattatc cactttctca accacaccgc cacgctttgc
    15901 tttaacagct tcccaagcat cacgcgcaat aatttgttcc atacctgttc ctactatcgg
    15961 agctgaagca gtaagaagtg gcacagcttg acgttgcatg tttgaaccca ttagtgctct
    16021 gtttgcatca tcgtgctcta aaaacggaat caaagaagcc gcaaccccaa caaccatacc
    16081 tgagcaaaga tcgattaatt gcacttcttc gcgtcttgca agtatagttt caccatcttg
    16141 tctagcctca acaaattctt ctactatatt gcctttagca tcaaccttag ttgaagctgg
    16201 tgcgataaat aagccttctt cttgtgttgc tgtaagataa acaacttcat tagtcacttt
    16261 accatttaca acttttctat atggtgcttc aacaaagcca agttcgttta cttttgcata
    16321 agtagaaaga gtgttaatca aaccaatatt ttgaccttca ggtgtttcaa ctggacaaat
    16381 tctaccataa tgtgtcgcgt gaacatcacg cacttcaaaa cctgctcttt cttttacaag
    16441 tccaccttca ccaagcgctg ataaacgacg cttatgagta acctcgctta aagggttggt
    16501 ttgatccata aattgcgaaa gctgacctcc tgtaaaaaat tcaatgatag ttgtagtaat
    16561 cattttagga ttgattaaat cataaggcat tactttatca agatccgcat ttaaagaagt
    16621 aaatttatct ctgatcgcct tttgcatttt tgcaagacct aaatgaagtt cattggctaa
    16681 aagttcacct atagaacgga tacgacgatt tcctaaatga tctctatcat caatatgtcc
    16741 tttaccattt tttactttaa ttaaatattt tgcagtttta ataatatctt cattagtcaa
    16801 aacagtaaca tactcaggta cttcaagacc taatttatgg ttcattttca tacgacctac
    16861 cttggtaaga tcgtatcttt caggattgaa gaataaatca tttacaaaag ccttcgctgc
    16921 atcttttacc acaggttcac ctgggcgcat aactttgtaa attctaatcg cagctaaatc
    16981 attttcatca tcgatatttt cactttgttt aagaagtttt agagtttctc catcttgagc
    17041 aaaggagtta ataatcgctg catcaacgcc attagccaag tcatttgcta tatcaaaact
    17101 tttttgctct ttaatcttag caagcttact ctcatctaac aaagttaaag aatcaaataa
    17161 aacctctcca ctttctttat caataatagg atttgctaaa taacgattaa gtaaaatttc
    17221 tacaggatat tctatccatt ttaaaccgtc tttaataagc tgttctgctt ttttctttgt
    17281 aagtcttttt ccagcttgat gaacgatttt tcctttttca tctttaatat catattctat
    17341 tctatccata aaatcatttg gattaaattc tgttaaaaat ttatcttttt tcacatgtat
    17401 agtctgaata ggataaaaca acttaataat atcttgtttt ttatacccta aagctctaaa
    17461 aagcatagtt acaggaactt ttctacgctt attgattctt acatacaaaa catctttggc
    17521 atcgtattca aaataaagcc acgaaccacg atcaggaata atttgtgctg tataaacaag
    17581 cttatttgca accgttgaac tttcttcttc tttaaaaata acaccagggc ttctatgtaa
    17641 ttgatttaca accaccctct caaccccatt aatgataaaa gatacacgat ctgtcattaa
    17701 aggaatttcg cggatataaa tttcttgttc tttaatatct tttacgccaa ctttttcccc
    17761 tgttttttca tctttttcat gcagagtaag acggattttc atttttaaat ttacagaata
    17821 agtcaaacct ctttccatgc attcgcgaat ggtatatttt ggcttgccta tttcactact
    17881 aacatattca agactcaatc tattttgcgg atcatgaata ggaaaaattg atttaaaaac
    17941 tttttctata ccactttcac cattatcaag atttaaaaaa taatcaaaac tctttttttg
    18001 taattgtaga agatttggga tttctatttg ttttgaaatg tttgagaagt ctactcttaa
    18061 acgatttcct aatttattat ctaacatatc gcacatacct catggtaaat tttgtaaatt
    18121 taaaaaagaa gacctaaaaa ttaggtaaaa ataaaaaaag aagacttgcc ttggcaaatc
    18181 ttcttctaac tttaaagctt aaaattactt aagttctact ttagcaccag cttcttcaag
    18241 ttgtttttta gcttcctcag cttcagcttt agccacaccc tcttttagag ttgaaggagt
    18301 ttgctcaact gcatcttttg cttctttaag accaaggcct gtaagagcac gaacgatttt
    18361 aataacttca atctttttag caccgccatc agttaaaacg atatcaaatt cagttttttc
    18421 ttcagcagca gctgcagcac caccagctgc agcaccacca gctatcatta caggagcagc
    18481 agacacacca aatttttctt caaactcttt tacaagttct gataactcaa gaacacttaa
    18541 atttgaaata tattctaata catcttcttt agagattgcc attttttatc cttttattta
    18601 atttattcag attctttttt atttttaagc gcatttaaac ctattgtgaa attggtaatt
    18661 ggcgcattcc aaacttgcaa aagcatagca agcaactcat tgcgtgaagg cattttagca
    18721 agagctttaa ccttagcaac atctgcaact tcgccttcaa tatgagctgt tttgatttca
    18781 aatttatcgt tattttcttc aaatttagca gctacttttg aaacacctag ctgatcttcg
    18841 ccccaaagat aaatatttgt atctttaaga actagacctg ttttaccgga attattaaga
    18901 gcaatgttag ccaaagtatt tttaacaatt tgaactttta cattgttttc tcttgcatta
    18961 tttctaagct cttctagttt ttttgtgcta agacctctgt aattacaaac tacaatagct
    19021 tcactagctt taaaaccttc ttcaagttta gcaataatct caactttttc gcttctagtc
    19081 acattttctc ctttccgatt gagatttcaa gtagagtgga aatccaatta agcttacgcc
    19141 tcgactatct tcaatctaaa ataaacatct caaaaaatca aaaatttttt caaatgttta
    19201 ttttaaaaca aaagagttgc aaaaaagcaa ctcttatttc atatcaagca attcttgtgt
    19261 ttcaagcttt acagaagggc tcattgtcaa agataaagcc gcatttttaa tatatctacc
    19321 tttagctgca gcaggtttat gtttgttaat tgcctttaca aaagtgctaa cattgtccca
    19381 taattgttct ttggaaaaac ttactttacc aagacctgca tggatatttc cttgcttatc
    19441 aacacggaaa tttacctgac cactttttgc attattaact gcttgagcaa catccatagt
    19501 cactgttcca gttttaggat ttggcattaa accttttggc cctaaaattc taccaacttt
    19561 accaacaagt cccattaaat ttggagtagc aatcaaaaca tcaaaattca tattaccttt
    19621 ttgaatttct tctactaaat catcgctacc cacaatatct gcaccagcat ttttcgcttc
    19681 atcagctttt gcgtcttttg caattacagc aacacgaact tttttacccg ttccagcagg
    19741 taaaacaaca gatcctctta ccatttgatc tgcatgtctt ggatcaacat taagttttaa
    19801 agcaatttct acagtctcat caaatttagc agactttaaa gtctttattg tatcaattgc
    19861 atcgcttaaa gcatactctt tatttgaatc aattttttgt gataattctt ttaatctttt
    19921 tgctatctta gccatttaat tttctccgca ttttaaagtg ctaccgcctt ttaccttggc
    19981 ggtgaaagga ttaatctacg atttcaacac ccatagaacg agctgaacct gcaataattt
    20041 tagcagcttg atctctatct ttagtattta aatctgcaat tttcttatct actatttcta
    20101 aaacttgagc acgagttaac ttacccacct tatttttaag tggattatcc gtacctttag
    20161 aaattccagc tgcttttttg atcaaatccg tagctggcgg ttgttttgta ataaaagtaa
    20221 aacttttatc tgcataaaca gtgataacaa cagggatatt aaaacctgcc atatcttttg
    20281 ttctttcatt aaaagcctta caaaactcca taatattaac accttgctga cccaaagcag
    20341 gaccaacagg tggtgatggg tttgcttttg tggcagcaat ttgcaattta atttcgccta
    20401 cgactttttt agccataaca aatctcctta cttgatataa attaaattat tttctcaact
    20461 tgagaatata agatctccac tggagttgaa cgtccaaaaa tagaaacatt taattttaat
    20521 aaaccacgaa ccatatcata ctcttctaca attgcagtaa agtttgcaaa tggcccttct
    20581 gtgattctca cattttcccc ttcttcaaaa gaaatctttg gtttaggcgc tgcacgattg
    20641 tgaacttttt ccaaaatcaa attaatatct ttttctgtta aaggggttgg ctttttggat
    20701 tctccaataa aacgaccaac ctttggaaga gattgaatgc gatgccaaag ctctgtattt
    20761 aaatcaagaa gtgcaaaaac gtatcctgaa tacaaacttc tttcgctaat cttctccttt
    20821 ccattcttaa attcaataac atcttcagtt ggaacaacaa tttctttaag ttgttcttca
    20881 attccgttat cttttactaa attttcaatg gctcttttaa ctgccatttc actgccagca
    20941 taagtttgaa ttgcatacca tttatgagta ctcatttact ctccttatac gatcgcagaa
    21001 acaatagagg acataagcca atccactaac gccaaaaaca aagaaatcac cacaacaacc
    21061 acaaaaactg taatataggc atttcttacc tgttctttta aaggaaaaat tactttcctt
    21121 aattcggctt ttgataattt aaaataagtt attaattttt ccatttattt aaaccttaat
    21181 tatggcaggg caagagggat tcgaaccccc aaccatcgga tttggaatcc ggcgctctac
    21241 cgttggagct attgccctaa gggcgcaagc ttaacttttt agcttaactt ctttgtgaag
    21301 tgtatgtttt tttaatcttg ggcaatattt ttttaattct aatttttcag tagtattttt
    21361 actattttta taggtgctat aattaatatc accacattct tcacacttta aaccaacttt
    21421 aattctcatt tcaattttcc ttaaaaaatt aaagccaagc ttttaacttg gctttattaa
    21481 attatttaat aattttagaa acaacacctg aaccaacagt tttaccacct tcacgaatag
    21541 caaaacgagt tccttcttca agtgctactg gagcgatcaa gcttacagta attctcacat
    21601 tttcacctgg cataaccatt tcaacaccat cagctaattt aatcgaacct gtaacatcag
    21661 ttgttcttac ataaaactgc ggtctatagt tgttaaagaa tggagtatgt ctaccacctt
    21721 catctttatt taagatataa acttcagctt cgaagtcagt gtgtggagta attgattttg
    21781 gtttagcaag aaccatacca cggataactt cttctttttt agtaccacga agaagaacac
    21841 ctacgttatc tcctgcttcg ccttgatcca tttcttttct gaacatttca acacctgtta
    21901 cagttgttgt ttgagtatct ttaataccaa cgatttcgat agtatcacct acttttacaa
    21961 cacctttttc aattctacct gtaacaacag taccacgacc tgaaattgag aaaacgtctt
    22021 caattggcat caagaagtct ttttcagtat cacgagttgg agttggaata tagctatcaa
    22081 ctgcagccat aagatccata atttttgctg accattcacc atcttgtcca gctttagctt
    22141 cttcaagagc ttttaaagca gaaccagaaa taataggtgt atcatcgcct gggaaatcat
    22201 aagagcttaa taattctcta atttccattt caactaactc tagaagttca gcatcatcaa
    22261 ccatatctgc tttattcata aaaacaacaa tatatggaac acctacttga cgagaaagaa
    22321 gaatgtgctc tctagtttgt ggcatagggc catctgcagc agaaacaacc aagatcgctc
    22381 catccatttg tgcagcacct gtaatcatgt ttttaacata atctgcgtga cctgggcagt
    22441 caacgtgtgc atagtgacga ttgtctgttt catattcaat atgagaagta gcaatagtaa
    22501 taccacgctc tttttcttct ggagcattat cgatattatc ataatcttta agctctgcca
    22561 aacctcttct agaaagaaca gcagaaatag cagctgttaa agtagtttta ccatggtcaa
    22621 cgtgaccaat agtaccaata tttacgtgtg gcttattacg tgaaaatttt tctttagcca
    22681 tttttttcct ccgtataaaa aataaattga gcaaagcaag tcttatatct atataatttt
    22741 ttcaattcat ggagctcata gcgggaattg aacccgcgac ctctccctta ccaagggagt
    22801 gctctacctc tgagctatac gagcgctcag aaaaattata cacaataaca gacaacaaaa
    22861 actcttaaat gggatatata ctgtaagtta aaggttttaa aatacagctc ccagttcttt
    22921 taaattattg gagcgggaaa cgggactcga acccgcgacc ctcagcttgg aaggctgatg
    22981 ctctagccaa ctgagctact cccgcaaagc atggtggtga gtcgtggatt cgaaccacgg
    23041 aaggcgaaag ccagcagatt tacagtctgc cctcgttggc cacttgagta actcaccata
    23101 aaaatattgc tttttcaata ttctggtcaa acactgctaa aataaatgga gctggttaag
    23161 ggacttgaac ccccgacctg ctgcttacaa ggcagctgct ctaccaactg agctaaacca
    23221 gcaaaaataa aagtaagatt ataactcaaa aaaaaaattt tgtcaagact tttttagttt
    23281 ttctataaaa tttttagtct tgtaaatttt attatcataa accaatatta tttttatcta
    23341 tttgtgataa tcaaataaat ttaaaaattt ctttgctctt tcgctttttg gatttttaaa
    23401 aaaactttta ggatcatttt cttcgatgat ttttccttca tccataaaaa taattttatc
    23461 tgctacagct ttagcaaaac ccatttcatg agtaacaata agcatagtca taccctcttt
    23521 tgcaagattt aacatcactt ctaaaacttc tctgacaatc tcaggatcca gcgctgctgt
    23581 aacctcatca aaaagcatta actcaggatt catgcataaa cttcttacta tagcaattct
    23641 ttgtttttgt cctccgctaa gttctcttgg ataagcatga attttatgca aaagccccac
    23701 cttttcaagc caaattttag cctcttgtaa aaccttatct ttctttcttt tttgcacttt
    23761 cataggccct aaaagtatat tttcttcaac acttaaatgc tcaaaaagct cataagattg
    23821 aaaaaccata ccaacttttt gacgcattct tggccattct ttgaaatctt tatctatttt
    23881 ttcattgtca atataaatat taccacttgc aatctcttca agcccattaa tacaacgcaa
    23941 aagcgtagat tttccgcacc cactaggacc caaaatcacc acaacttcct tatccttaac
    24001 ttctaaatta atatctttta aagcatgatg cgaaccataa tacttttgta aattttctat
    24061 ttttagtata ctcattttag ctccattttt tctctaattt tcttgaatat aaagtgatag
    24121 gataacaaag tataaaaaag ataaaaaaaa tcaaaccata aataataaaa ggtgcaaaat
    24181 catttctatt atgaaattct ataatttgtt gccctacttt tacaagctct accgcgccga
    24241 ttaaataagc aaaggttgta cttttgatca tgcgagtaag taaattcatg ctcataggag
    24301 ttaaacgacg catagcttgt ggaataataa cataagcaaa actttgcacc gtatttaaac
    24361 ctaaagatga tgcactttca tactgatgtt ttggaatact ctgtaaggaa acacgcacca
    24421 aatccatcat ctcaaaacaa ccccaaatgc taaaaacaat aatagctaca cttacagaac
    24481 tcaaatccca cccaaaccat ctaggaaaac caaaatacac cacaaaaaac catactaaaa
    24541 gtggcataac acgtacaaat tctaaaccta aacgacaaaa agcatagata taggtatttt
    24601 taaaactcat taaaattccc aaaaacaacc cgcctatcga agtaataata gtgctgataa
    24661 atgaaatttc aagagtgaca aaaagccctt gccagagtct taaaagcgta tcggtattta
    24721 aaagttcaag cataaagcaa ccttttttca aactttagca aaataaaaga caaaggcaaa
    24781 ataatgcaca aatatcccat aaacaacaaa aacaatagct catctgtctt ataggttaag
    24841 gaatttaaac tcttcattaa attcaccaaa tctggcaagg caataatgct aacaactgaa
    24901 gtttctttga ttaaaaatat aatattagca ctaatacttg gcatagaaat agccaaagct
    24961 tgcggcaaaa tcacataacg caaatttcca aattttgaaa aacccaaaga aagtcctgct
    25021 tcaaactgct gttttcttat ggcttcaaat cccgccctta aactctcagc catataagaa
    25081 ccccctaaaa aactaagtcc tactatagca caagcaaaag aaggtcttaa agtttcttct
    25141 acgcttaaac aaattaaatt gagcggtgga atttgctcta aatgtatatt aaatttaggc
    25201 aaagcataat ataagaaaaa aagttgaatt aataaaggcg tattt
//
LOCUS       DARATF010000010        25066 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.010, whole genome shotgun sequence.
ACCESSION   DARATF010000010 DARATF010000000
VERSION     DARATF010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25066
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.010"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            52..2049
                     /locus_tag="SB502_000338"
     CDS             52..2049
                     /locus_tag="SB502_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEG0433825.1"
                     /translation="MMYKKQNLPELTLRGLVLGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRTMVVESKLAYPEGRAAAEILKVANKDQSSKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKYIVMQHLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
     gene            2124..2927
                     /locus_tag="SB502_000339"
     CDS             2124..2927
                     /locus_tag="SB502_000339"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEG0433826.1"
                     /translation="MENLYALILGIIEGLTEFLPVSSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAVGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVLILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLGNANSLIPLGIGFITAFI
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFVFFYLYYSGILNAGSEFKL"
     gene            3059..4867
                     /locus_tag="SB502_000340"
     CDS             3059..4867
                     /locus_tag="SB502_000340"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEG0433827.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEIATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            4864..5382
                     /locus_tag="SB502_000341"
     CDS             4864..5382
                     /locus_tag="SB502_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEG0433828.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            5421..6512
                     /locus_tag="SB502_000342"
     CDS             5421..6512
                     /locus_tag="SB502_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEG0433829.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLSFLNNGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLEDYSKLINECYLANKDKDLLQNIKKYYKNLIQ
                     NLDFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDANILAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKSKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            6554..10013
                     /locus_tag="SB502_000343"
                     /pseudo
     CDS             6554..10013
                     /locus_tag="SB502_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            10094..11122
                     /locus_tag="SB502_000344"
     CDS             10094..11122
                     /locus_tag="SB502_000344"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEG0433830.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYNLALHRHTPEIEEHLSY
                     AAKKKIILQFTPHLVSMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            11132..11578
                     /locus_tag="SB502_000345"
     CDS             11132..11578
                     /locus_tag="SB502_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0433831.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVVDEEIVGSILCGHDGRIGGFYHVCVHKDHRKKGIAHEMTKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            11582..12427
                     /gene="argB"
                     /locus_tag="SB502_000346"
     CDS             11582..12427
                     /gene="argB"
                     /locus_tag="SB502_000346"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEG0433832.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKVTIEVASMVL
                     NHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDEDFNTYNINADDVACAIAKALRAEKLAFLTDTAGLYEDFSDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            12431..13618
                     /locus_tag="SB502_000347"
     CDS             12431..13618
                     /locus_tag="SB502_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEG0433833.1"
                     /translation="MKMDYKEQSHIVPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGIKSGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHG
                     STYGGNPLVCAGVNTVFEIFKEEKILENVNKLTPYLEQSLDELIKEFDFCKKRKGLGF
                     MQGLSLDKSVKVFKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(13637..14266)
                     /locus_tag="SB502_000348"
     CDS             complement(13637..14266)
                     /locus_tag="SB502_000348"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEG0433834.1"
                     /translation="MNAFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIIDGKE"
     gene            14355..14903
                     /locus_tag="SB502_000349"
     CDS             14355..14903
                     /locus_tag="SB502_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEG0433835.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESGIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEI
                     SFLKQSALNYVDFKNEFLKDLQ"
     gene            complement(14872..16245)
                     /locus_tag="SB502_000350"
     CDS             complement(14872..16245)
                     /locus_tag="SB502_000350"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEG0433836.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPD
                     SGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKGEIYAMRE
                     GEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLKLSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(16232..17254)
                     /locus_tag="SB502_000351"
     CDS             complement(16232..17254)
                     /locus_tag="SB502_000351"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEG0433837.1"
                     /translation="MQRKRIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(17268..17678)
                     /locus_tag="SB502_000352"
     CDS             complement(17268..17678)
                     /locus_tag="SB502_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEG0433838.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYVPILYLFYFLLGSKESFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKA"
     gene            complement(17679..18287)
                     /gene="pyrE"
                     /locus_tag="SB502_000353"
     CDS             complement(17679..18287)
                     /gene="pyrE"
                     /locus_tag="SB502_000353"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEG0433839.1"
                     /translation="MNLGQIYKDCGAYLEDHFLLSSGKHSQFYLQSAKVLENPKLAAK
                     LCDELAKIIASYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKGEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYDETNCPLCKKGSKAIKPGSRGN"
     gene            complement(18290..18853)
                     /gene="frr"
                     /locus_tag="SB502_000354"
     CDS             complement(18290..18853)
                     /gene="frr"
                     /locus_tag="SB502_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEG0433840.1"
                     /translation="MIMLSEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITV
                     DYYGTQTPLNQVATVLASDASTINITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDAYTIKIDESVKSKESELLKV"
     gene            complement(18863..19234)
                     /gene="secG"
                     /locus_tag="SB502_000355"
     CDS             complement(18863..19234)
                     /gene="secG"
                     /locus_tag="SB502_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEG0433841.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIPSAPIVPAT
                     PNTNSIAPSAAQLPSDVNSSK"
     gene            complement(19338..20033)
                     /locus_tag="SB502_000356"
     CDS             complement(19338..20033)
                     /locus_tag="SB502_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEG0433842.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVIGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            20194..20829
                     /locus_tag="SB502_000357"
     CDS             20194..20829
                     /locus_tag="SB502_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEG0433843.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRIGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            20826..22709
                     /locus_tag="SB502_000358"
     CDS             20826..22709
                     /locus_tag="SB502_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEG0433844.1"
                     /translation="MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNSEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     FFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(22732..23703)
                     /locus_tag="SB502_000359"
     CDS             complement(22732..23703)
                     /locus_tag="SB502_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HEG0433845.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(23713..24894)
                     /locus_tag="SB502_000360"
     CDS             complement(23713..24894)
                     /locus_tag="SB502_000360"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HEG0433846.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIIVTSCATESINWVLKGVYFDYILDKERNEVIISSVEH
                     PAVTAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
BASE COUNT         8535 a         3418 c         4422 g         8691 t
ORIGIN      
        1 aaacttataa gaatattttt taagttgaaa gtaaaatttt aaaacggaga aatgatgtac
       61 aaaaaacaaa atttaccaga acttacctta aggggtttgg ttttgggaag tattttaact
      121 attattttta cagcttcaaa tgtatattta gggttaaaag tgggacttac tttttcatca
      181 tcaattccag ctgtggtcat ctccatggcg gttttgagtc tttttaagac ttcaaatatt
      241 ttagaaaata atatggttca aactcaagct tcagcagcag gaactttatc atcagttatt
      301 tttgttatcc cagggctttt tatgtgtggg tattggagtg aatttccact ttggcaaact
      361 tttatgatat gtctttgtgg tggcggactt ggagtgcttt ttactatacc attaagaagg
      421 actatggtgg ttgaaagcaa gcttgcttat cctgaaggta gagctgcagc tgaaatttta
      481 aaagtagcca ataaagatca gagtagtaaa aaaggaaaac aaggcattaa agaaatagca
      541 ttaggctctt ttatagctgc tatttttagt ttgttaagca atggttttaa actcgctgca
      601 agtgagagta attttgcttt tatttggaat aaaatggctt ttggtttttc tatgggatat
      661 tctttggcac ttttaggggc aggttattta gttggtttag caggtgctat agctcttttt
      721 gtaggtatgt ttttagcttg gggtattttt actccctatc tttcaaattt tgaattcgat
      781 agtgcaaaaa atgccgtaga tttagcttct agtgtatgga gttctaaagt aaggcttata
      841 ggaacaggag ctattgctat agcagcgctt tggactttaa tagaactttt aaaacccgtt
      901 attgaaggta ttaaagaaat tgttaaaaat gttaaaatta ctaatcaaga aaaaaatgaa
      961 agaacaaata tagacctttc tttaaaaagt atttttatac tttttgtttt aatggttgtg
     1021 ggtttattta ttacttttta tagttttgtt gaagatgcta acttaagtat ttattatcaa
     1081 atgctatttt catttgttgg aactttagtt tctgttttaa taggtttttt tgttgcagca
     1141 gcttgcggat atatggcagg acttgtagga tcttcttcta gtcctatttc tggaatcgga
     1201 cttattggtg ttattatttc ttctattgtt tttttggttt taggtgtgga actttttcaa
     1261 gatcctatgc tttctaaatt tgcagtagca ttagctattt ttactactag tgttatttta
     1321 gctacagctg ctatttcgaa tgataattta caagatttaa agacaggaca tttagtcgga
     1381 gctactcctt ggaaacaaca agttgcttta cttgtaggct gtgtttttgg tgctttggct
     1441 atagttcctg ttttaaattt gctttatcaa gcctatggtt ttgtcggagc aatgccaaga
     1501 gaaggtatgg atgcttcatc agctttagca gcaccgcaag caaatttaat gagtactatc
     1561 gcccaaggaa tttttcatca caatatagag tggggttata tggcttttgg tgtatttgta
     1621 ggaattttaa tgattattat agataaaatt ttaagaagaa cacagaaaat gtctttgccg
     1681 cctttagccg ttggaatagg tatttacctt ccccctgctg taaatatacc tttagttata
     1741 ggcggaattt taaaatatat tgtaatgcaa cacttgacta aaaaatatgc aaaaaattct
     1801 cataaagaag aaaaacttgc aagttgtgag caaagaggca cgctttttgc ttcagggctt
     1861 atagtgggtg aaagtatttt tggggtaatt atcgcaggaa ttactgtatt ttcagtaagt
     1921 atgggtggta gtgaaaatcc tttagcttta aatttagcaa attttcatga tagtgagctt
     1981 ttcgcactta tcttttttgt gggagttgta ttatatttca ttaagcgtat tgttaaaaaa
     2041 gatgcttaat ttttggggtt aaaaccctat ttaatccatt ctgatataat ttttcttttg
     2101 caattatcat tcaaggatta aatatggaaa atttatatgc tttaatactt ggaattatag
     2161 aaggtctgac tgagttttta cctgtttctt caacaggaca tatgatttta ggtacgacta
     2221 ttttaggtat cgatatagat gagttttgga aaagcttttt gattatcatc cagcttggtt
     2281 ctattttggc ggtaattttt gtattttggc gtaaattgtt tcaagggctt gatatttggt
     2341 taaaacttgc agtgggattt tttcctaccg gagttatagg gctttttgtg gcaaaatact
     2401 taaatgcttt atttaatggt tgggttgtgg ttggaatgct catttttggt ggtgttgtgc
     2461 ttattcttat agaacttgcg cacaaaaata aacaatatcg tatcaattct ttagaagaaa
     2521 taagctttaa acaagctttt tgtataggta tttttcaatc tttagccatg attcctggca
     2581 cttcaaggag tggagcaagt attattggtg ggcttttgtt aggatttaat agaaaagtgg
     2641 ctgctgagtt tagttttttg cttgccattc caacgatgat tatcgctaca gcttatagca
     2701 tttataaaga gcctgagctt cttggcaatg caaattcttt aattccttta ggcataggtt
     2761 ttatcactgc ttttattgtt gcagttttag ttataaaatt tttcttaaaa tttatttcta
     2821 aattcgactt tatccctttt ggaatttatc gtattatttt aggatttgtt ttcttttatt
     2881 tgtattatag tgggatttta aatgctggaa gtgaatttaa gctataaata aatattaaat
     2941 ttattctaag atttttttta aaaataagct gaatttcaaa aataattaag tcttagaaag
     3001 ttaaaattag aactttataa acactcacag ggtaagtgag cgacaaaggg ttaaaaatat
     3061 ggaaaaagaa gttattgcgt atttggacaa tgagacgata attgactctc aaagtgtgaa
     3121 aaatacaaat ttaaaagaaa tttattttga taattctaaa gaaagtttag aagtgatacg
     3181 ccattcttgt gcgcatttga tggcacaggc gattaagagc ttgtatcctg aggctaaatt
     3241 tttcgttggt cctgttatag aagatggatt ttattatgat tttcgtgtag aaagtaagat
     3301 tggcgaagaa gatttagtaa aaattgaaaa aaagatgaaa gaacttgctg aagcaaagat
     3361 tgaaatttca aaatatgaaa tcacaaaaaa cgaagctttg gctaaatttc aaaatgatga
     3421 tttaaaacaa gaagttttat tgcgtattcc tgatggagct gtaagtattt ataaacaagg
     3481 tgaatttgaa gatttgtgtc gtggtcctca tgtgccaaat acgaaatttt tacgcttttt
     3541 taaactcact cgtgttgcag gagcgtattt gggtggcgat gaaaaaagag aaatgcttac
     3601 tcgaatttat gggactgctt ttgcagataa ggaaagttta aaagagtatt taaccattat
     3661 tgaagaagct aaaaaacgcg atcatagaaa gcttggaaca gagcttaaac tttttacttt
     3721 tgatgatgag atcggaggag gccttcctat ctggttaagt aatggtgcaa gacttagatc
     3781 taaacttgaa catatgcttt ataaaattca tcgtttgcgt ggttatgagc ctgtgcgtgg
     3841 gcctgagctt ttaaaagcag atgcatggaa aatcagtggg cattatgcaa actataaaga
     3901 aaatatgtat tttacacaaa ttgatgaaca agagtatggt attaagccta tgaactgtgt
     3961 gggacatatt aaaatttatc aaagtgatgt aagaagctat cgtgatttgc ctttgaaatt
     4021 ttttgaatac ggcgtagtgc atcgtcatga aaaaagtggg gttttgcacg gactttttag
     4081 agtgagagaa ttcactcaag atgatgcaca tattttttgt atgccaagtc agattaaaga
     4141 gcaggtttta gaaattttag cttttgtgga taatttgatg aaattatttg attttagcta
     4201 tgaaatggaa atttcaacta aacctgaaaa agccataggt gatgatgaaa tttgggaaat
     4261 agcgactaag gctttaaaag aagctttaga tgaacaaggt ttaaaatacg gtattgatga
     4321 aggtggcggg gctttttatg ggccaaagat tgatattaaa atcaccgatg ctttaaaaag
     4381 aaagtggcaa tgtggaacca tacaagtaga ttttaacctg ccaagtcgtt ttaaacttga
     4441 atacactgat agtgataatg aaaaaaaaca acctgtaatg ttgcatcgtg cgattttagg
     4501 ttcttttgaa agatttatag gaattttaac cgagcattgt gcgggtgagt ttccgttttt
     4561 tatcgcacca actgcggtgg gtatagtgcc aataggcgaa gcacatattg cttacgcaaa
     4621 agaaattcaa aaagaattat tagagcttaa tatcgatagc gaggtgtatg aaaaaaatga
     4681 gagcttaagt aaaaaaattc gtatcgctga aaagcaaaaa ttacctatga ttttagtttt
     4741 aggcgatgat gaggtggcaa agcgtagcgt tgctttaaga gatagaagag ctaaagaaca
     4801 aaaaaatctt agcttggacg aatttattaa attagttaag gagaaaatga gtgaggtaca
     4861 cttttgagta aagaaaaaga agtattgctc aatgaagaaa taagagcgga tgaaatcaga
     4921 tgtgttggcg atgatggcaa agtttatggt attatcagta gtgatgaagc tttagaaatt
     4981 gcaaatcgtt taggacttga tcttgtaatg atagctgcag atgctaagcc acctgtttgc
     5041 aagatcatgg actatggtaa attccgttat caacaagaga aaaaacaaaa agaagcaaag
     5101 aaaaaacaaa aagtgattga tataaaagaa atcaaacttt ctgtaaaaat tgctcaaaat
     5161 gatattaatt acaaggtaaa acatgcttta gaatttttag aacaaggtaa gcatgtgaga
     5221 tttcgtgtgt tcttaaaagg acgtgaaatg gcaactcctg aagcaggtgt agctttgctt
     5281 gaaaaaattt ggactatgat agaaaatgaa gctaatcgtg acaaagagcc aaattttgaa
     5341 ggtcgttatg taaatatgct tgtaactcca aaaaaagctt aatccacttt tgtggataag
     5401 gcttttaaag gttttaaatt ttgaaagaaa atccttcttt tttaaaagag caaattataa
     5461 cttatcttgg aaataaaaga gcacttttaa gttttttaaa taatggcttt aaggtagcta
     5521 aaaaagaact tggtaaagat aaatttagtt tttgtgatat atttagtggc tcaggtgttg
     5581 taagtcgttt tgcaaaagca cactcaaatt atattttagc caatgattta gaagattatt
     5641 caaaactcat caatgagtgt tatcttgcta ataaagacaa agatttactt caaaatataa
     5701 aaaagtatta taaaaattta atccaaaatt tagattttca aaaaggtttt atcagtgagc
     5761 tttatgctcc aaaagatgat gatgatatta aaaaaaatga aagggttttt tatactttta
     5821 aaaatgcttt atatcttgat actataaggc aaaaaatcga aaatgaaatt ccaaaagaat
     5881 tgaggcattt ctttatagct cctttgattt atgaagccag tgttcattca aatactagcg
     5941 gagtttttaa aggtttttat aagggtaagg atggcatcgg aaaatttggt ggcgaaggac
     6001 aaaatgcact taaacgcatt aaaggagaaa tagagcttaa aatgcctatt ttttcaaatt
     6061 tttcttgtga atttgaagtg atgcaaaagg atgcaaacat acttgcaaaa gaacttgatt
     6121 tttttgatgt agtgtatctt gacccccctt ataatcagca cccttatagt tctaattatt
     6181 ttatgctaaa tttaattgca aattataaaa aacctgaaga aatttctaaa atcagtggca
     6241 ttccaaagga ttggaaccgc agtactttta ataagtcaaa atttgcccaa gatgctttat
     6301 ttgaacttat taatgattta aaagcaagag tgattttact ttcttataat tgtgaaggtt
     6361 ttgtaaaaaa agaaattttt ttaaagcgct taagcactct tggaaaatgc cggattttag
     6421 agcaaaaata taatactttt agagcttctc gcaatcttaa aaatcgcaac atccatcttc
     6481 atgagcaact ttatatttta gttaaaaatt agtttttcgt gctaaaattg cacttaaaaa
     6541 tgaggaggga tttatgaaac taaaattatc tttttgtgca ttaatggcat ttggtttttc
     6601 taactatctt tttgcttcag ctattgatcc aaagttattt tcaagaatat cttgattttg
     6661 ccagtaataa aggcaaattt caagtaggtc aaattggctt ttaaatttta gcaaaaaatc
     6721 ctagtcaaaa tatctctttt aatgtgccta tgattgattt ttctacttca aatcgtggag
     6781 gaaaattcca aggagaattt accaatatag gacaatctta tatagtcagc gcttctcata
     6841 tgagtacaag tttaaatact gggaagtaaa taaaggctat gtgaaacaag gtagtgtttt
     6901 acactttgga ggggtagcaa atagaatcgt aagctcaagt gataatttta cttataaaaa
     6961 agaaaatgtg gattttgctg ttttaaaaat gagtaagatt agtctcaata aaagtgcaaa
     7021 tttgagtaaa gatttaaatc ttattgaaaa aaattctggc gatggtggag atatttatga
     7081 atacaaggat ccattttggg atagttgtca aagtggaaaa tgtgattatt caaaaggtaa
     7141 aggcaagctt tttgatagtt cgcgttatga gtactttgca agagagggaa gtggtattgt
     7201 agctttaggt tttgaagata caaataaagt acccattaag atttttgatt ctaatgaaat
     7261 caatttagga ggttttgtca gtttaactcc taaaaatact gaagataagc gttttaagtt
     7321 gcaatttctt aattatacca atgataaaag aaattctttt acaagttctt taatatcctg
     7381 ggattctgga agtggagtgt ttatgataag atggataaaa atggtattta gtgggtgtgg
     7441 taagtacgag taattgtaat gtccatttta ctatggatat acttgtttac aggttgatta
     7501 tgctttgatc aatcaagtaa agatcaatga attttaaaat gctcataaag tagccatagg
     7561 atctggaact tatacactta gtagcgatgg tttggtgaaa gatggtaaaa aaatagaaaa
     7621 tgtaagtttg atttctaaga ctaatgtggg ttatgtaagc tataaaaatt cttttgatga
     7681 taaaaataat tgtgataaga gaattgaaga aatgcaaaat agcaaggatt tgtatttttc
     7741 tcaaaatgga agtataaatt taaatagcga tgtggattta ggcgctagtg ttttaaattt
     7801 gataaaaatt caaattggca aataacaggc gataaatggc ttatacatgg cggaatttat
     7861 gctgataagg gttcaaggta gaatataatg ttaaaaccaa aaaagatgat tttctttata
     7921 aaatgggtga aggagagctt gttgtcaaaa gtcaaagtgt ggatacagga cttagaatgg
     7981 gtgaggacca aggtaagtct tgagggtgaa ggttgaagtt ttggcgaaat ttatatgaat
     8041 ggtggaactt tggatctatc gggcttaaca ttaaaatttg atcaaattaa agctaactct
     8101 aataatgttt ttatcacaag ctctaaagca ggggcaaatt taaatttaga aaacaagcaa
     8161 aattatcttt atcatggcaa tatttttcag atgaggccat aacaattagt gctaatacag
     8221 ataaagcttt gatttttgat ggtaatattt acaataaaga aggtgttttt aggacagaaa
     8281 atgccaagtt aaattttcaa ggacatgcta gaatacacgc ttatgtaagc aaagaacaag
     8341 ctaaaaaact tcaagaacat ggtttaagtg ctttaactaa gcctgtaagt tttacacaag
     8401 aagattggga agatagggtt tttgttttaa aagagcttaa tttagaaaaa aagcgagttt
     8461 tatttagggc gtaatgtaag cttaaaagta gaaaacctta atgctaaaaa ttccaaaata
     8521 gagcttggaa gtaaaaattt gtggatcgat gaaaaagatg gggaaaatat tattgataag
     8581 actgatgatt attcttatgg agatgttgta taaacaggag ttggcaaaga aatggctttt
     8641 gagcaaaagc tttaaaatac ccaaaatgct aagatagaaa aggtttattt tagtgtaaat
     8701 ttaaatcttg atcattctga tgttactttg caaaacacat tttttagtgg taatatcaaa
     8761 ggtatcaatg atacgcaaaa aaaaatcttg cgattaaaga ttctttgctt gagtctcata
     8821 tataaatgag caatcttcaa gtagaaaaaa gtgctattta taggaaagtt gatgcaaaaa
     8881 aattaagtgc aaataataca atatttaaaa tcaatgcgga ttttgaaaat tctaaagcag
     8941 attatattaa ttctaaggaa agcacacaag gagtaaataa tactttagta ttaatttttc
     9001 ttaataatcc tagtaaaaag cgggtttaaa tatcttacta gctcatttaa aagatgaaaa
     9061 taaacattta acaaaggaat tttttactat gccaaatgtg agcaaggttt tagtacgtat
     9121 accccaaatg ttgttttttc tcataatgaa gaaaattttg cccagagtgg aatttagaaa
     9181 aaattgattc taagattaaa gatgaatatt tttttactaa tgataatact caagctattg
     9241 taaaaactaa atctatactt gctcaagcta ttttaggctc catgatagga gtgggataat
     9301 atgcataaaa gaatggggga attacgcaat aatccttatg aaagtggtgt atggttaaga
     9361 acttttggat ggggtacgag tgatgagtat aatagtggaa aatactttga aattcaaagc
     9421 ggacatgata aattaaacga gtattcgaat ttcgagcttt acagtggagt aaggttttta
     9481 tagtgatttt gttttagata tatttattat caaaatgaaa taaatgcaaa ttttattcca
     9541 ggaaatcaag gtagattaga tgataatgat ggttcgcata atattatctt aagtgctgag
     9601 ttaggttata gaaaagctta tgataaattt tatcttgagc cgagtttgga atttatcagt
     9661 ggttatgtag gagctatgga tctaaaagga gatattgcta gtttaaaacg attttcttat
     9721 attcctttag tcgtaaaaac agcatttttc ataggaagtc aaaattaaaa tttaaatttt
     9781 agaacaggac ttggtttgta tgcggatccg attaaagcag gagatcaaat cttggaggat
     9841 caagcaagtc agagaagata tgaaggaaaa aagatcaaag aatgtttata aatttaggaa
     9901 atgattataa gcttaacgat aaaacacgct ttagttttga atttgaaaag acattttttg
     9961 gcgatttaaa tgtagattgg agtgcaaatg ctaatttaag atatagtttt taaataaaaa
    10021 ataatttaaa aattgtattt ttattttaag cttttttgtt tataatactt gcttttacat
    10081 ttaaaggata aagatgaaaa taaaagttgg gattttagga gcgagtggtt atgcgggaaa
    10141 tgaacttgtt cgcattttgc ttaatcatcc caaggttgaa atttcttatt tgggttcgag
    10201 ttctagcgtg gggcaaaatt atcaagatct ttatcctaac acccctttaa atttatgttt
    10261 tgaaaataaa aatttagatg aacttgaact tgatcttttg tttttggcta ctccgcatga
    10321 atttagtgct aaacttttaa atgagaattt attaaaaaag atgaaaatca ttgatttaag
    10381 tgcggatttt cgtcttaaaa atcctaaaga ttatgagctt tggtataaat tcactcatcc
    10441 taatcaagag cttttgcaaa atgcggttta tggactttgt gagctttata aagaagagat
    10501 aaaaaaagca agtttagtgg caaatccagg ttgttatacc acttgttcta tcttaagtct
    10561 ttatccgctt tttaaagaaa agatcattga ttttagctca gttattattg atgcaaaaag
    10621 tggagtaagt ggagcaggaa gaagtgcaaa ggtggaaaat cttttttgtg aagttaatga
    10681 aaatatcaaa gcttataatt tagctttgca tcgccatact cctgaaattg aagagcattt
    10741 aagctatgca gccaaaaaga aaatcattct acaatttacc cctcatcttg tgtctatgca
    10801 aagaggaatt ttaatcagtg cttatgcaaa tttaaaagag gatttgcaag aacaagatat
    10861 acgcgatatt tatacaaaat actatcaaaa caataaattc ataaggcttt taccgccgca
    10921 gtcgcttccg cagactcggt gggttaaatc aagcaatttt gcggatataa attttagtgt
    10981 agatcaacgc acaaagcgtg ttattgtgct tggtgctatt gataatttaa tcaaaggtgc
    11041 agcaggacaa gctgttcaaa atatgaattt aatgtttgat tttgatgaag atgaaggact
    11101 taaattcttt gcaaatttgt aaaggataaa aatgttaata cgagctatgc aaaaaagcga
    11161 ttatgaagcc gtttataagc tttggtgtga gataaaaggc tttgggataa gaagcattga
    11221 tgatagcaaa gaaaatatag aaaatttttt agatagaaac ccaaatctta gcgttgtagc
    11281 agtggttgat gaagaaattg taggaagtat actttgcggg catgatggac gcataggagg
    11341 attttatcat gtatgtgtac ataaagatca tagaaaaaag ggtatagcgc acgagatgac
    11401 taaattttgt cttgaggctt taaaagctca aaagattaat aaaatcgcct taatcgcttt
    11461 taaaaacaat gatttaggca atgagttttg gaaacattat ggttttactt taagagagga
    11521 tgcgaattat tacgatcttt ctttaaatga gtataatcaa actagcttta atgcttaagg
    11581 aatgatcatg caaaaatatt tagaaaaagc taatgtctta atcgaagctt tgccttatat
    11641 acgcaaattt aattctaaga ttatacttat aaaatacggc ggatcagcta tggaaaatga
    11701 agagctaaag cattgtgtga tgcaagatat agctctttta aaactcgtgg gtttaaagcc
    11761 tattattgta catggtgggg gaaaagatat ttctgctatg tgtgaaaaat taggcgtaaa
    11821 gagtgagttt aaaaacggtc ttagggttag tgataaagtc actattgaag tagccagcat
    11881 ggttttaaat catatcaata aaaatttagt ccatagtttg caaaatttag gagttaaagc
    11941 catagggctt tgtggtaaag atggcgcgct tttagaatgt gtgaaaaaag atgaaaattt
    12001 agcttttgtt ggcacgatac aaaaggtaaa ttcgaaaatt ttagaagagc ttttagagaa
    12061 agatttttta cctatcattg ctcctattgg catggatgag gattttaata cttataatat
    12121 taacgctgat gacgtagctt gtgcgatcgc caaggcttta agggctgaaa aacttgcttt
    12181 tttaaccgat actgcaggac tttatgagga ttttagtgat aaaaattctt tgatttctaa
    12241 aattagcctt gaacaagcta aaattttagc tcctaaaata gaaggtggta tgcatgtaaa
    12301 attaaaatct tgcattgatg cttgtgaaaa tggagtcaaa aaggtgcata ttttagatgg
    12361 acgcgtgaag cattctttat tgcttgagtt ttttactgat gaaggtatag gcactttggt
    12421 gggttaaagg atgaaaatgg attataaaga acaaagtcat attgtcccta cttataagcg
    12481 ttttgatata gttttagaaa aagggcaggg ggtttatctt tttgatgata aggctaaaaa
    12541 atatcttgat ttttcaagtg gtataggtgt ttgtgcttta ggatataatc atgctaaatt
    12601 taatgctaaa atcaaagctc aagtggataa acttttacat actagcaatt tatattataa
    12661 tgaaaacata gctgctgcag ctaaaaattt agccaaagct agtgctttag agcgtgtttt
    12721 ttttacaaat tctggtacag aaagtataga aggagcgatg aaaacagcta gaaaatacgc
    12781 ttttaacaaa ggcattaaga gtggacaatt tatcgctttt aagcattctt ttcatgggcg
    12841 tactttaggg gctttatcgc ttactgctaa tgaaaaatat caaaagcctt ttaaaccttt
    12901 aatttcaggg gttaaatttg caaaatataa tgatatttca agcgttgaaa aactggtgaa
    12961 tgaaaaaact tgtgccatta tcttagaaag cgtgcaagga gaaggtggga taaatcctgc
    13021 aaataaagat ttttacaaag ccttaagaaa gctttgcgat gaaaaagata tattattaat
    13081 cgctgatgaa attcaatgtg gtatgggtag aagtggaaaa ttttttgcct atgagcacgc
    13141 acaaattttg cctgatatca tgacttcagc gaaggccttg ggttgtgggc ttagtgtggg
    13201 tgcttttgta ataaatcaaa aggtagcaag caattcttta gaagcgggcg atcatggtag
    13261 cacttatggg ggaaatcctt tggtttgtgc aggagtgaat acagtttttg aaatttttaa
    13321 agaagaaaaa attttagaaa atgtcaataa actcacgcct tatttagagc aaagtttaga
    13381 tgagttgatc aaagaatttg atttttgtaa aaaacgcaaa ggtttagggt ttatgcaagg
    13441 gctgagtctt gataaaagtg taaaagtatt caaggtcatt caaaaatgcc aagaaaatgc
    13501 acttttactg ataagttgtg gagagaatga tttgagattt ttacctcctt taattttgca
    13561 aaaagaacat attgatgaaa tgagcgaaaa gttaagaaag gctctaaaga gtttttaata
    13621 aattttgtaa aaaagtttat tcttttccat ctattatagg cacaaataaa cattcttcta
    13681 aaatttcttt ttgtaaattt gtgccatttt ttctaaggcg tgtgatgaat tgtttgccat
    13741 tgtgtaaaat aggagcgact aaaatcccgt catcgcttaa ttgatcgagt aaaatttcag
    13801 gaatttgtgt cgcataagca gaaaataaaa tcctatcata aggagcataa tttttccagc
    13861 cattttgccc atcatcaaat tttacattga tattaaaaag ttctaattct ctgaaagttt
    13921 gagcggcttt tttggctaaa ttttctatgc gttctatggt aaaaacacgc cttatgactt
    13981 tgcttaaaat cgcagcttga tagccacttc cacaacctat ctctaaaata ctatcagcat
    14041 ttttaaaatc taaggccata gtcattttag ctacagttaa aggtgaacta atccattgag
    14101 aatttgccaa aggcaaagca tcaaggcgat aagcatgggc ttttaaagga gaaaaaattt
    14161 cacgcggaat ttgacaaaaa gcattaaaaa gttcttcatt gataaaaact ttttgtgcaa
    14221 tttcttcagc catattttga catctttttt gttcaaatgc gttcattact tctcctataa
    14281 atttaaataa aaattgtaac taaaaaagtt gaaatagagt taaacttagc tatacttaaa
    14341 taaaaaggaa aaaaatgctt ataaaattta aaaatcatag tcccaaacta ggtcaaaatg
    14401 tttttgttgc agagggcgct aaaatcatag gagaaataga aataggagat gaaagtggta
    14461 tttggtttaa ttgtgtttta agagccgatg ttaattttat aaaaattggc aaaagaacca
    14521 atattcaaga tcttagcacg gtgcatgttt ggcataggga atttgatgaa aaaggaaagt
    14581 taaaagacgc tggttttcct acgataatag gagatgatgt aaccatagga cataattgcg
    14641 ttatccatgc ttgtgtgata aaaaatcgtg ttttaatcgg aatgaatgct gttatcatgg
    14701 acaatgcttt gatagaagaa gatagcatag tgggtgctgg aagcgttgta acaaagggta
    14761 aaaaatttcc gccacgctct ttgatacttg gaaatcctgc aaaatttgtg cgtgaattaa
    14821 acgatgaaga aataagcttt ctaaaacaat ccgctttaaa ttatgtggat tttaaaaacg
    14881 agtttttaaa agatcttcag tgatattttg aagtttaggt gagagtttta cttcaaattt
    14941 cacaaaacga tcaagatcta aaaaactctc atcgagtttt gaaatttgct cttttgtata
    15001 atcttgaata gtatttaaag atgacttttt aagaagtctt ttttctttgt agactaattc
    15061 taaaagttct ttgcgttcta aattttcatc ttgatttggg ttttcgtcaa aaacataaag
    15121 ctcatcaaaa aggatttttt gcgtgttttt atcataaacc ctaaaaagct ttttaaaatg
    15181 aggtagggtt gatttttcgt tattttcgct gattttgatt ttaggtttta tgccttgatc
    15241 ttctaaggct gcgagtttat aaacgcaact aaaaataggg tcacttgaag cagtgatcaa
    15301 tctttcacct acaccaaaga tatcaatagg tgcattttgt tctttgagtt ttttaatact
    15361 ccattcatca agggcgttag aaactatgat tttacatttt tgaagtcctg cttgatcaag
    15421 ttcttgtctg attttcaaac tcaacttaag taaatttcca gaatctattc tcacaccgcc
    15481 ttcttggata ccaaattctt taaaaacttt aatcgcattt ttaagtccgc tatttagaca
    15541 atcataagta tcaatcaaaa aaacaggatt ttttggataa attttcacat aagctttaaa
    15601 agcttcaagt tcattttcaa acatttgcac ccaagaatgt gccatagttc cattgatagg
    15661 gatattataa atttttcctg ctaaagtaca agcacttcct atgcaacctc ctataaaagc
    15721 tgctcttgct ccttttaagg ctgcttcact tccttgtgct ctgcgtgaac caaattctaa
    15781 aattttactg tctttagctg cacgcacgat acgattggtt ttggtagcaa taaggctttg
    15841 gtggtttaaa cttaaaagta aaaaagtttc taaaagctgt gcttctatgg ttgtagcttt
    15901 aatacatagc aaaggttcgt ttggaaaaat cacttctcct tcacgcatag cataaatttc
    15961 acccttaaat ttaaagttag ctaaaaaatc taaaaattct gtatcaaaaa taccttgttt
    16021 tcttaaaaat tctatatctt ctgcatcaaa actcaaattt tcaacaaagt ctaaaatatc
    16081 ttcaagacct gcaaaaatag caaaagatcc tgaatctgga atttttctaa aaaatatatc
    16141 aaaataacaa atttgatctt ttttattgtt tttgaaatag ccttgagaca ttgtaaattc
    16201 ataaaaatca caaagcaagg ctaaagaagt tttagaagtc atcaaagctt atactaccct
    16261 tagaataatt cgttacttta ctttcaaaga aattgctctt ttgatcgtta aattttgaaa
    16321 aatcatctac ccatttaata ggatgttttg cattgtataa cttatctaaa ttgatcgcgc
    16381 ttaatctttg atctacaaga taatggatat attcttctat gatatcatca gtaaagccca
    16441 tgatttgatt ttgagtgatg tatttacccc atttgatctc aagatctcca gcttttttaa
    16501 acatatcata aattttattg atattttcat catggaacaa atcaggtctt tctttgcgta
    16561 ctgaattgat catattttga aataataaaa gatgtgtgat ttcatctctt tggataaagc
    16621 ggatcatttg tgctgaacct agcatttttc ctgcacgtgc aagtgcgtaa atggcagtaa
    16681 aaccactata aaaatatact ccttctaaaa tttgatttgc caccatagcc aaaagaagtt
    16741 tattatcatc tacatcgcct gctaattctt cataaatgct tgaaataaag tcattttttt
    16801 cacgcaaagt ttcatcatgc ttttccattt cataaatcaa atctgtatta tcgcaaatcg
    16861 cttctaccat aacagcgtaa gattttgaat ggtttgcctc ttcataagct tggcgtgcta
    16921 aaactgcatt gatttcagga gctgtgatgt aagggttgat attgtctgct aaattattgg
    16981 tttgaaaact atccatagaa ataagctgac tccaaaccaa atcatacatt cttttttcac
    17041 ctgcagttaa attacagcga taatcaagtg catctttagt tgtatccact tcttttggaa
    17101 accaagtatt tgcctccatt aaatcccaaa gttttaaagc ccaagtatat tttgccttag
    17161 taaaatttaa aattccatgt gggttaccat caaaaacttt acgatctcct aaggtttcgt
    17221 ttgaacttgg attgtaaatt ctttttcttt gcatttttaa cctttcttta tgctttagta
    17281 gctatacaac tttgagttaa aatatcgtgt aaatttaaac gatcttttct tacaaaactg
    17341 acaaataaac caaagagtaa gccaaaactt ataataaata tcacatatct tagtaaaatt
    17401 ctaagaaaac ttagtttctt tcccgttttt atatcaataa gatataaatc atatgcttta
    17461 agacctgggc tttgtgcctt ttttgttaaa aaaatagctt gaatcaaacc aaataaaaaa
    17521 gtacataaag ttgtgataaa atggttgttt aaaaaagatt ctttagagcc taatagaaaa
    17581 taaaataaat acaaaatagg aacataaata agaaaaatat ctataagcaa agctctaaat
    17641 cttagccatc tagagctaat ttttgcttta gttttcattt aatttccacg gcttcctggt
    17701 tttatagctt tactcccttt tttacaaagt ggacaatttg tttcatcata aatttcaaat
    17761 tcaaaatttc ctagagtaaa gagtggtaaa ttttcaggta atttcgcatt atcttttctt
    17821 ggagatttta aattttctac tgcacaaaaa ccacgatttg ccaatgctgc aaaacctaca
    17881 acaatgccac ctaaactttc aatgattttt gcactctcta aagcactacc acctgtagta
    17941 atgatatctt cacaaattat aaatttttca ccctttttca cctcaaaacc acgtcttaaa
    18001 gtcatttctt tatttactct ttcagtgaag ataaaacgtt tactacaagc tctcgcaagc
    18061 tcataacctg ctaaaattcc acctaaagca ggagaacaaa tgctatcaaa ttctatctta
    18121 tagcttgcaa taatctttgc aagttcgtca caaagttttg ctgctaattt tggattctct
    18181 aaaacttttg cactttgaag ataaaattgc gaatgtttac ctgaacttag taaaaaatgg
    18241 tcttctaaat aagcaccaca atctttataa atttgcccta aattcatcgt taaaccttta
    18301 aaagttcact ttctttactt tttacactct catcaatttt tattgtgtag gcgtcggtaa
    18361 gtttttgcac ttcatcataa gctttttttg cttcatcttc gcttattgcc ttatcttttt
    18421 ctagtttttt aactgcatcg ttggcatctt tgcgtatatt tcttatagaa acttttgcct
    18481 tttcacccat agctttagct tgctttacgt tttcttctct ttgctctcta gtcatcggag
    18541 ggaaaaataa ttttacactt tcgccgtcat tgtttggatt tacaccgata tttgcagctg
    18601 caatagcact ttctatggtt tttagtaaag gtttttccca aggagtgatg ttaatagttg
    18661 aagcatcgct tgctaaaaca gttgctactt gatttaaagg agtttgagtt ccgtaataat
    18721 ccactgtaat atgatctaaa atatgggtat taacttttcc agttcttaaa gtggtgaagt
    18781 ctttttttaa ggcttctaaa gatttttcac tttgggtttt ttgtttgtta aaaatttcac
    18841 ttagcattat catttccttt aattatttac ttgaattaac atcgcttgga agttgtgctg
    18901 cacttggagc gatagaattt gtgtttgggg tagcaggcac aataggagcg cttggaatag
    18961 tagtgttgtt gttttctact ttaattttct ctgctagtga gtccttgcta gctttattgt
    19021 ataaataacc aagaccaata gtatttgcaa taagtaaaat tcccatgaca aaggtaaatt
    19081 ttgccaaaaa tccagccggt cctttggcac caaataaact ttcattgctt ccactataag
    19141 ctccaagtcc tatacttgaa cttttttgaa gtaaaactgc tatacaaata actacaacga
    19201 tgataaattg taaaatgatt aaaagagtga tcattgaaaa ttcctaaaag ttaattttta
    19261 aatgattatt ttaactaaat aaaacttgaa aagttttgaa acttgaaaag tttttgtgag
    19321 aaaaatccca caaaaactta tctgctattg aagcttctta agatattaag taaagatacg
    19381 aaaagattaa caaaatcaag ataaagtgct actgcacctt cgattggagt ttcataattt
    19441 ccgcggataa tattttgcgt atcataaaga atgtaaaatg aaaataatat tgcagctact
    19501 gctgaaatag ctagattaac tatactgctt tggaagaaaa ggtttagtaa agatgctgct
    19561 acaataacga ttaatactat aaataaagct ttgcctataa cagtaaaatc tttttttgta
    19621 ttcatagcaa atacgctaag tcctgcaaaa gcaactgttg ttaaagcaaa agcttgagcg
    19681 atgataattc ctccagctgg tagagctaaa actgaaataa gcaaaggtgt aagtgttaaa
    19741 cctgagcaga aagtaaaacc aaaaagtaaa acaagattta atggagcttc tctttttttc
    19801 cattgcaaag caaataaaag tccgatttca acagcaaaaa ggatccaaaa agttacttgt
    19861 gattgtataa aaaatgatgc taaagcaaaa attcctacat acgcacctac tgttgcagct
    19921 aataatgaag cagcaaaaag ttgataagtt tgtttaataa aaatacttaa ttcgcttgag
    19981 cgtgtatttt caaattcttt tgatcttgag tagtctctat cataaagact cataaaattc
    20041 tccttgcaaa attgttagat tttttaaaat cttgagcgaa atctaacata ttagactaaa
    20101 taaaaagtta atttatataa tatctttatg attaaatgaa atctttgctg aaattttgtt
    20161 ataattttaa gattttagtt tcaggttggt tttatggaaa atcttattag tggtgcgatt
    20221 aagtttatgc aagaagactt taaggagcat gaagaacttt ttgaaagtct aaaaaataag
    20281 caaaatcccc atactctttt tataggttgt tctgattcta gagtaattcc aaatttgatc
    20341 accaatacgg gtccaggtga gctttttgta atacgaaata ttgcaaatat agttccacct
    20401 tatcgcattg gggaagatta cttagcgaca acttcagcaa tagagtatgc tttaaattca
    20461 ttgcatatta aaaatatcgt cgtttgtggc catagtaatt gtggaggttg caatgctctt
    20521 tattattctg atgaagagtt aaataaaatt cctaatgtga aaaaatggct tactatgtta
    20581 gatccgataa aaaaagatgt aatgattttt gcaagagacg atttggctat gcgttcatgg
    20641 cttacagaaa aattaaattt agtaaattct ttgcaaaata tacttactta tccaggcgtg
    20701 caagaagctt tagatgaagg aaaaatagaa gtacatgctt ggtattatat tatagagaca
    20761 ggtgaaattt atgagtatga ttttaaagca aaaattttta ctttaataca ggataggaaa
    20821 gttcaatgaa gaaaattatt tttagtttat gtttttttat tttatacctt ggagcacaag
    20881 aatttaaatt tattgatgcg aatattagta aagaggatga aggaatttat gctttagttg
    20941 aaaaatatgt tgatcttaac aatcaaatta aagaatttaa gaaaaacaat gatgaaaatt
    21001 caagcacttt taatggtatt ttaagtgaat ttgaaaaaga caaaaagact attttagcaa
    21061 aaatacccga tatgatagta ggacaaaaga ttaatgaaga ggcagtggct agatttttaa
    21121 aagcaaaaga aaaattacta gatgttcaaa aaaagaatat taataagcct tatatttata
    21181 cagatgccac tcttaatcta gtttatttta atattgtgga aagtttttat tcttctttgt
    21241 ttgaagtgga aaaacttttt aaaaatacag caagcagtga agatttgatt gctactgttg
    21301 ataaggcaat ggaaaattta caaaattctt ctaatgttaa tttagatagt tttaaaagca
    21361 aaattacaaa ttcagaagaa ttagaaaaaa ttaccctaaa agaaagatat atcagtaatg
    21421 ctgtagattc ttattctgaa attcttaagt atttacgctc aaatgcagat ttgcttgaaa
    21481 gtaattatat tttttcatta ctcgagcttc aagtttggat agatcgtata aatgaggcaa
    21541 ttggggtaag ttttgttaat atcggaaaaa tagtaatttc tgctctggtt ttagtatttt
    21601 ttatatcttt aagacgtttt tttgcaaata tagtatattt tttccttgtt cagttttttt
    21661 atagaaataa aaatgatgta gatgatatta aagtcatttt tattgagaat attaaaaaac
    21721 ccgtaggctt cttgttgatt gtctatgcta tttctctttg tcttactata gcaacttatc
    21781 ctgcaccttt gagtgtaaat ttaagtaatt tttttcatat agtttatgca gttttaattg
    21841 catggcttat tttaagaatg cttgatggtt atggcgtggt attggtttct aaacttgctc
    21901 aaaaaagtgg aaaaaaagaa gttgtaaatt taattattaa aattttatat tttgtcatta
    21961 ttattatagc cttattatat attcttgctc aacttggttt taatatttcg gctattattg
    22021 catctttggg aattggtggt ttagctgttg ctttagcggc gaaagatatc attgcaaatt
    22081 tctttgcttc tatactctta ctttttgata atagctttaa tcaaggagat tgggtagagg
    22141 tttcaggcat agaaggaacc gtggttgaaa caggacttag aaaaactact attagaactt
    22201 ttgataattg tcttgtattt ttaccaaatt caactattat gggagctaat atcaaaaatt
    22261 ggagcaaaag acgcatgggt cgccatgtta gaatgtattt gggtgttggt tatgatgcta
    22321 ctcctgaaaa actagaacaa tgtgtaaaag atctaagaga atttttgcat acaagtgatt
    22381 tagtagctca cgatgaggat agcgcattaa aatatggcga tcatacaaca aaatatcgtc
    22441 aaaatcttgt atctattaat gatttagaag gctataaaaa tgcttgttat gtggctttaa
    22501 gtgaatttgc agatagtagt attaatatag agctttattt ttatatcaaa gaaataggtg
    22561 gaaaagattt tagagaagct agacaaagtt taatgcttga gtttatgcgt ataattgaaa
    22621 aaaatggttt aacctttgct ttcccaagtc gtagtattta tatagaaaat ttaccacccc
    22681 ttgatttgca agcaaaagct ataaaatagc aagattttat cttgctattt tttaaaccgg
    22741 cataacgcgt atatttggac ttaattcttc ttgtaaaatt gtttcaatag cataaagtgt
    22801 tgcaccactt ccactagaac aaccactaca agcaccaaga taacgaatat aaacatcaat
    22861 tgctgcacct tcagcctttt gtatatcaat cacttccaaa tctccaccat cattatgaag
    22921 catagggcga atttcagcat ctaaaacact ttcaactgct tttaattgtc ccactacggt
    22981 catttcatca aaagctacat cacttttcat tgtatttttg agtttttctc tatctatttc
    23041 agctctagtt tcagctaaaa tatctacaag gtaataatct cttttttcat gtccgcctgg
    23101 tttgatacag gatttacaaa aagcacccgc tttagtgtat tgtgtgattt cttctacgct
    23161 atgcaaatca ttaagtttaa tcacttcttt aatagttcca agacttaccc tagcgcactc
    23221 gcaaactata atttgatctt caaaatcttc aggacttatg cctttataat gcgctgctgc
    23281 ttgtttgatt acatcataag ccataaccga acagtgcatt ttttgaggtg gaacagctgg
    23341 agtttctgga ttatcacgca tagcaaattc cacatctaaa tttgtgattt ttactgcttc
    23401 atctacagtt tttcctatac aaagatccac catagtatca ctacttgcta tagctgtacc
    23461 acaaccaaaa cttttaaatt ttgcatcgat aattttatca gttttttcat ctacaagcca
    23521 aaaaagtctt accgcatcgc cgcaactttc tgcgccaaaa tcagctacga tcaattttgc
    23581 attgcgtgct ttagcatctt cttcactaaa ttctcccata tgttgaggat tattcattct
    23641 atcttgaact ttttgtgaat actcatccca aatggatcca ccaattaaac tattttttcc
    23701 catttttcat ccttatttgt aattatttgg attataagca taagtacaag aaattgctct
    23761 taatctctgt gttgcatttt taatttgttt tgctgcataa tcaatttctt cttcagtgtt
    23821 aaaacgtgac aaagaaagcc ttaaagctgt atgcgctaaa tcatgctccg caccgatagc
    23881 ttccataata ggattgcttt ctaaagcttc acttgcacag gctgagcccg tacttgcagc
    23941 tataccattt ttatttaaat cccaaagcat tgcttcgcct tcaactcctt taatacttgc
    24001 taagattgta ttaggcacac ggtgttctct ttttccaacc actgttgtat caggcaaggc
    24061 taaaatttga tcttctagtt tatctcttaa acggcgtata tgagaatctt caaaatcaag
    24121 catagtattt gcaatacgca aagcctcgcc catagccact atataaggta catttaaagt
    24181 cccgcttcta cgaccaccca tgtgttctcc accgtgtaaa agtggagtaa gcttaagtcc
    24241 tttttttata aaaagtccac ccacaccctt tggtccatga aatttatgtg ccgaaaatga
    24301 agcaaaatca actcctactt gagttaaatt aacctttatt ttacctactg cttgagtagc
    24361 atctgtatga aaaagagcac caaattcatg cgcaagttct gccatcgctt taatatcaaa
    24421 aatcatacct gtttcattat ttgcccacat aacacttaca agtgctgttt tatcgctaat
    24481 cactttacgc aaatcttcta cagtagaaac tccttcttca tttacaggaa gttctatgac
    24541 ttttactcca agacttttta aaaaataagc agcagcagta acagcagggt gttctacact
    24601 agaaataatc acttcattgc gttctttatc taaaatataa tcaaaataca cacccttaag
    24661 cacccagtta atgctttctg tcgcacagga ggttacaatt atgtcatcta ggtcatttgc
    24721 tccaagtcct gcataaagtt tatccaaagc ttctcttaag gcaggatgtg ttgcgctacc
    24781 atattgatga aggctatttg gatttccata catatccttt aaaaaaggta gcatcaactc
    24841 ataagcatta ggatcaagca ttgtcgttgc gttgttatct aaatatactt tcactttaaa
    24901 atccttaatt tatccttaat tttaattagg atatttttta tctttatttg aaaacggata
    24961 ataacaaaaa tttataaaaa ttaggttaaa aattataaca aaaataaaat gctaaagtaa
    25021 aattttaaag tgaaatattt tgtgaatttt atatagcaaa aatgag
//
LOCUS       DARATF010000011        25005 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.011, whole genome shotgun sequence.
ACCESSION   DARATF010000011 DARATF010000000
VERSION     DARATF010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25005
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.011"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            90..659
                     /locus_tag="SB502_000361"
     CDS             90..659
                     /locus_tag="SB502_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEG0433847.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRARELNPDLEVVIASLNS
                     ELLVKGANSISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLTK"
     gene            complement(689..1054)
                     /locus_tag="SB502_000362"
     CDS             complement(689..1054)
                     /locus_tag="SB502_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEG0433848.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            1177..2169
                     /gene="pheS"
                     /locus_tag="SB502_000363"
     CDS             1177..2169
                     /gene="pheS"
                     /locus_tag="SB502_000363"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEG0433849.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDE
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            2166..4487
                     /locus_tag="SB502_000364"
     CDS             2166..4487
                     /locus_tag="SB502_000364"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEG0433850.1"
                     /translation="MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMSNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLAAALNLNLKEPKPFKESENVLGIGRILRLAAEKELNG
                     LYNYRAIELKEEIQTNLLLSLRLAQIEGLGKNSIENLLNYATHSTGVLFNAYDLSSFS
                     EKDEEFTINLSKQVHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV
                     IADAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIESISDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     VVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            4484..5770
                     /gene="aroA"
                     /locus_tag="SB502_000365"
     CDS             4484..5770
                     /gene="aroA"
                     /locus_tag="SB502_000365"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEG0433851.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNFKS
                     EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENILKAMKAPIRVSNDGLSLEINP
                     LKKPLKAQNIIIPNDPSSAFYFVLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            5760..6593
                     /locus_tag="SB502_000366"
     CDS             5760..6593
                     /locus_tag="SB502_000366"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEG0433852.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQSLSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIKNFKI
                     N"
     gene            6725..8395
                     /locus_tag="SB502_000367"
     CDS             6725..8395
                     /locus_tag="SB502_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEG0433853.1"
                     /translation="MSEVNKKVQGGVDDYLEEEDFGQLLEAFDKSREEAATEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQDDNSKLLFNVGDGIKVAVMGSRGGRSLLSHKKALR
                     KEKVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNVAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSAKELNSSPV
                     QEYAKIHKVGDIVKGTIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRIKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            8395..8883
                     /locus_tag="SB502_000368"
     CDS             8395..8883
                     /locus_tag="SB502_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433854.1"
                     /translation="MKKYITMSILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            8880..10463
                     /locus_tag="SB502_000369"
     CDS             8880..10463
                     /locus_tag="SB502_000369"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEG0433855.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKFPKDELMQILSD
                     IEVAITRSSTDVDVNFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            10450..11112
                     /locus_tag="SB502_000370"
     CDS             10450..11112
                     /locus_tag="SB502_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0433856.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLADFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLVSYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGIGYK
                     LC"
     gene            11106..12395
                     /locus_tag="SB502_000371"
     CDS             11106..12395
                     /locus_tag="SB502_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0433857.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKNFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKSFIYKGYKYIIIVYPRFLDLELFWTKMAIGFGVCLLFVFILMLLLGRRI
                     EKNFNKILDFLDSIGDHKVVILEKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKI
                     TLKNTQLASVISAISHELKNPLSVIDLSLEMLKDEKLEDKKLKKELLEKISRQSVKLN
                     ALTHKLNFVFNLNSEALQMQEFDLFSLCEKITKNPGFERVALQGKSTKVKADEFLIEQ
                     VIINLLSNALKYSQKKVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDVKSDNSF
                     GLGLFLVKKILNIHKSYLEISSTLGYGSSFSFKLSQG"
     gene            12399..14330
                     /locus_tag="SB502_000372"
     CDS             12399..14330
                     /locus_tag="SB502_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEG0433858.1"
                     /translation="MALIDLIEASKKFGDKIVLNEVNFSANEGEKIAIIGKNGEGKST
                     FLKTLLGTLPLDSGRIIRQNGKSIAMLSQTVDFNANLSVKEAIKQELVEIYNTLEEYE
                     ILHKKLEEDPSNKDYLQKIDTLMTLIDSKDAWSIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNREKTINRKKMLFEL
                     KNISKNINNKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDSGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFEGNGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
     gene            complement(14359..14433)
                     /locus_tag="SB502_000373"
     tRNA            complement(14359..14433)
                     /locus_tag="SB502_000373"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14399..14401),aa:Gly,seq:gcc)
     gene            complement(14444..14530)
                     /locus_tag="SB502_000374"
     tRNA            complement(14444..14530)
                     /locus_tag="SB502_000374"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14494..14496),aa:Leu,seq:caa)
     gene            14712..16964
                     /gene="flgL"
                     /locus_tag="SB502_000375"
     CDS             14712..16964
                     /gene="flgL"
                     /locus_tag="SB502_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HEG0433859.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQGYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTRPDGTSFKSAVLVKPEDTL
                     EDVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKTE
                     LNNIIQAAQDEGITMEDVTNRVMTAALGNPNNGDITNLNNPVTIQINGQNFEIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNSQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNT
                     TMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTT
                     ISQLSLLNYM"
     gene            17074..19914
                     /locus_tag="SB502_000376"
     CDS             17074..19914
                     /locus_tag="SB502_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEG0433860.1"
                     /translation="MLAPGMGEWVYKANLFLFGEFGYYYPFSLLILNYLYYKKKYKIE
                     NFKRRELFGFSLAFFSTLLLFSVFYREFGYILEIVYGFFSIILGRTGSGIFALLLLLF
                     SLVLLFPKFAKEILKIELDFTYLLKVEQAFKSLLMRVFGGENEKEDVGKSEPIAPKLN
                     ILQDSIYGNLQINKKGETNNLEQIIKDSNINASKNSITTAKENFEKLKNQILDETIEI
                     DKQSLKESRSFVHEHSQQVRNFAQKASKMSISLDEDFNFISEEEVDMIPERFLKPKKL
                     EDIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKA
                     YQNEILENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKINENKNL
                     DKADNIFEFAPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKIDNEKTNDQ
                     EIKLQKAVLAKEIAINQALLREIEQGEVEKPKDFTLPPLDFLANPKEHKQEINESEID
                     KKIYNLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAK
                     SIRIQAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFV
                     TDLKKLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIP
                     HLLTPVITDPKKAVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGGEELPFIV
                     VIIDELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSR
                     ISYKVGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDF
                     LKDQQSVEYDESFLKDQQSVGVTTNESFDGEVDELYEEAKRVILEDGKTSISYLQRRL
                     KIGYNRSANIIEQLTQNGILSEPDAKGQREIL"
     gene            complement(20000..20272)
                     /gene="rpsO"
                     /locus_tag="SB502_000377"
     CDS             complement(20000..20272)
                     /gene="rpsO"
                     /locus_tag="SB502_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEG0433861.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            20447..20857
                     /locus_tag="SB502_000378"
     CDS             20447..20857
                     /locus_tag="SB502_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HEG0433862.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            20844..23018
                     /gene="flhA"
                     /locus_tag="SB502_000379"
     CDS             20844..23018
                     /gene="flhA"
                     /locus_tag="SB502_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEG0433863.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAAASQSGAGGTTATPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            23027..24073
                     /locus_tag="SB502_000380"
     CDS             23027..24073
                     /locus_tag="SB502_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEG0433864.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKNVKFYNSNYGKEINENFNS
                     IIGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNIKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDD
                     TLSNLISYFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNHIKAQIIDLI
                     KSKELKKENNESKQ"
     gene            24057..24299
                     /locus_tag="SB502_000381"
     CDS             24057..24299
                     /locus_tag="SB502_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433865.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
     gene            24296..24928
                     /locus_tag="SB502_000382"
     CDS             24296..24928
                     /locus_tag="SB502_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433866.1"
                     /translation="MKKCILIFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFSQENKDCLELLIEAGQVRILNSYNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINE
                     NLQNLENTMQDIMIYYKLRYSFSKDVKDMSKNKNLDILNIDEKDGGTLLYKINNQACV
                     GIELTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKDFKWYYLE"
     gene            complement(24906..25005)
                     /locus_tag="SB502_000383"
                     /pseudo
     CDS             complement(24906..25005)
                     /locus_tag="SB502_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344278.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         9395 a         3097 c         4401 g         8112 t
ORIGIN      
        1 tgttttggtt ataggtttta atcgtcaaat gatgcaaaaa aacaaagaaa gagaagaaag
       61 atttaaaaaa tataaaaaag gagaacaaaa tgagtaaaaa agtattaatt ccattggctc
      121 aaggttttga ggaagctgaa tttataggaa ttgcggatgt tttaaaacga gcaagagaat
      181 taaatccaga tttggaagtt gttatagctt cgttaaacag tgagttattg gtaaaaggtg
      241 ctaatagcat tagtataaaa gcagattgtt ctatagagga tgttgatata gaaaatttag
      301 atgccattgc tttggcgggt ggctttgaag gtatgatgaa tcttaagaat tcaaatgtta
      361 ttttaaatat cattaaacaa cttcatagca aaaataaaat tgttgccgca atctgtgctt
      421 ctcctatagt cttaaatgaa gcaggtgttt tagagggcga gtttgcttgc tatcctagtt
      481 gtgaagttgg acttaatgga aatcgtgtta acaaggctgt agttgtaaat aaaaatgtta
      541 taacttcagc aggtccagct acggcaattc tttttggttt agaactagct aaaaagttat
      601 gcggtgatga aatttatcaa aaattatatg agggaatgtt gctacctttg acaaaatagt
      661 ttaaatggta gtttttctac catttaaatt aaaataaagc ttgaggattt tctttttttg
      721 ttttttcctt aggcagttca aaacctccaa gcatatgaaa atgcaaatga aaaacttctt
      781 gtccactatt ttttccacag tttgttacca agcgatatcc acttttatct acacctaaaa
      841 gaacagctaa ttcttgtatg aaacttgtca ttttggccat aagctcagga tcaaattctt
      901 gaaagtcttt aaaatgtttt ttagggatta taagtatatg tatgggtgct ttgggtgcaa
      961 tatcatgaaa tgctagaaaa tcgtcacttt caagcacttt attgcatgga agtttacctt
     1021 caactatgag ttcaaaaatt gttttttctt gcattattta tcctttttta ttgttggttt
     1081 gatacaatta tatctttaaa gtttggtttt tatgctgaat ttaaaatagt ttttaataga
     1141 attagaactt gaaatatttt atttaaggta agaaaattgc aaaattttat agaacagatt
     1201 caaaaatgtg agaatttaaa tgatttggaa gccattagga tttccgttct tggaaaaaaa
     1261 ggtattttaa cagaaggctt tacaaagctt aaagagttag aagatgaggc gaaaaaagaa
     1321 tttgctgcta aattaaatgc acaaaaagaa atatttaatg aggcttattt agccaaattt
     1381 aaagatttgg aaaatcttgc tttagaagaa agaatgaaac aagatgcttt aaattttaac
     1441 tattttgatg aaagtattac aacaggtgcc ttgcatcctg ttatgagcac catggataaa
     1501 atcatagaat attttatagc tttgaatttt agcatagaaa aagggccctt aatagaagat
     1561 gactttcata attttgaagc gttaaattta cctaaatctc accccgcaag agatatgcaa
     1621 gatacctttt attttgatga taaaaggctt ttaagaacac aaacttcgcc agtgcaaata
     1681 cggacaatgc ttgcgcaaaa acctcctatt aggatgatag cccctggtgc tgtatttaga
     1741 agagattttg atattacgca tactcctatg tttcatcaag ttgaaggcct tgtggtggaa
     1801 gaagggcaaa aggttagctt tgcaaattta aaaagtgtat tggaagattt tttgcgttat
     1861 atgtttggag atgtgaaagt tcgttttcgt ccaagttttt tcccatttac agaaccttct
     1921 gctgaagttg atatttcttg tgtattttgc aaaggaaagg gttgtagagt ttgcaaacat
     1981 acaggttggc ttgaagtttt aggatgtgga atagttgatc ctaatgttta taattttgtt
     2041 ggttatgaaa atgtaagtgg ttatgctttt ggattgggag tagaacgttt tgcaatgctt
     2101 ttgcatcaaa ttccagattt aagatcttta tttgaaggtg atttgagatt attggagcag
     2161 tttagatgat aattactaaa agttggttga atgattggtt agaacttgaa gaaataagtt
     2221 cagataaaat agctaaaact ttaaactcta taggtataga agttgatagg gttggcgctt
     2281 taaaggctcc agataaagtt gttgtaggct atgttaagga aaaaattaaa catgaaaatt
     2341 cagataaatt aagcatttgt caagttgata tcggaagtga aaccttgcaa attgtctgcg
     2401 gtgctgcgaa tgttgatgca ggacaatttg tagctgttgc aactaaaggt gctatcatgt
     2461 caaacggtat ggaaataaaa gaagcaaaat tgcgaggagt ggattcttgt ggtatgcttt
     2521 gttctagctt agaactgggt tttgaaaaaa tcaatgaagg aattatgctt ttagatgaga
     2581 gtatagggaa attagaactt gggagacctt taaatactta tgaaattttt aatgatgagc
     2641 taatagaagt ggaacttact cctaataggg gtgattgttt aagtatttat ggtatagctc
     2701 gtgatttagc cgcagcttta aatttaaatt taaaagaacc aaaaccattt aaagaaagtg
     2761 aaaatgtttt aggtatcggt agaattttgc gcttagcagc tgagaaagaa cttaatggac
     2821 tttataatta tcgagccata gagctaaaag aagaaattca aacaaattta ttgcttagtt
     2881 taagacttgc tcaaattgaa ggtttgggaa aaaattccat agaaaattta ttaaattatg
     2941 caacgcattc aactggtgtt ctttttaatg cttatgattt aagtagtttt tctgaaaaag
     3001 atgaagaatt taccattaat ttaagcaagc aagtgcatgg agaaacaaaa gtatcttaca
     3061 aagataaact tttaagcttt agcggaattt tccaaaataa tgaaagtaga tgtaaagatg
     3121 attctaaaat aattattatt gaggctaatt ataccgatcc attggtaatt gcagatgcta
     3181 aaatatatca taaagatcaa gatgaaaaaa tgctttatag aagttttagg ggaagtgaac
     3241 ctaaattaaa tttaggaatg gattttttgc ttggtatttt tgagcagatt ccaaatcttg
     3301 ttatttatag ttcttctcaa caaattttaa ctgacaaaga attaccaatc ataccaataa
     3361 gtattgaaag tattagcgat ataatagggc aaaatgttga taaagatgaa gtattaaaaa
     3421 tattgaaaaa attaggtttt gaactcatac tttcaggtga agggcttata aatgttaaag
     3481 cacctttaca tcgtcctgat attaaaaatt tatcagatat ttgcgaggaa gttgtaagaa
     3541 ttataggtat tgataatatt gcttccaagg gtttggaatt tatagaaaaa aatcgtttaa
     3601 attctgcata taaaaattat attgagtttt tgaatttaag gaaaagagca gtagctagtg
     3661 gttattttga aagcttacat tatgttttgg ataatgaaga agaacttaaa agattgggtt
     3721 ttgactctgt taaattaaaa ctaatcaatc caattacagc agaacttaat actttaagaa
     3781 caaccctttt aaatcatttg ttaaatgcag caagtttaaa tgcaaaaaat tctaaaaaaa
     3841 ttattaaact ttttgaatta ggggttgttt tcaatgttaa taatcaagaa ttaaatcgta
     3901 tcgcatttat ccattctggc ttaaaagaag aagctaaaat ttccaacaag gccaaacctg
     3961 aatcggtgca attttatgat tttcttttag acattaaaaa tattataggt gattttaaac
     4021 taaaatcatc aaaatataat attttaagcc cttatgaaca agcagatatt tatctatcgg
     4081 atattaaagt aggttttata ggccgtttgc atttaaaaat agaaaatgag agagatttac
     4141 caaaaacata tatttgcgaa cttgatttag atttaatcag gcaagatttt aaaatagcta
     4201 agccttactc caaattccca gctatcacta gagatcttag cgtgttaata cctaaaggtt
     4261 ttgaatacaa tcagattaaa aattgtatcg aagaattgaa tttagaaata cttgaaaatt
     4321 ttcgtttagt tgatatttat agtgatgaaa accttaaaga attttatagc attactataa
     4381 gtttttcttt tagggatata aataaaactc tagaagataa tcaagtgaat gaatgtatgg
     4441 ataaaatttt aaatactctt aaaaatttgg gtcttgattt aagatgaaaa tttacaaatt
     4501 gcaaacccct gtaaatgcta tacttgaaaa tatagcagca gataaaagca tatctcatcg
     4561 ttttgctata ttttcgcttt taacacaaga agaaaataag gctcaaaatt atctcttagc
     4621 tcaagatact ttaaacactc ttgaaattat aaaaaatctt ggagctaaaa ttgaacaaaa
     4681 agattcttgc gtcaaaatta taccccctaa agaaatttta tctccaaatt gtattttaga
     4741 ctgtggaaat tcaggaactg ctatgcgttt gatgatagga tttttagcag gaatttctgg
     4801 tttttttgtt ttaagtggag ataagtattt aaacaatcgt cctatgagaa ggataagcaa
     4861 accacttact caaataggcg ctagaattta tggaagaaat gaggcaaatt tagctccact
     4921 ttgtatagaa ggtcaaaaat taaaagcttt taattttaaa agcgaaattt cttcggctca
     4981 agttaaaaca gctatgattt tatctgcttt tagagctgat aatgtatgca cttttagtga
     5041 aatttctctt agtcgaaatc atagtgaaaa catactaaag gctatgaaag ctccaataag
     5101 ggttagtaat gatggcttaa gtcttgaaat aaatccttta aaaaaacctt taaaagctca
     5161 aaatataatc attcctaatg atccttcttc ggctttttat tttgttttag cagctattat
     5221 tttgcctaaa tctcaaatta ttttaaaaaa tattttgctt aatcctactc gtatagaggc
     5281 gtataaaatt ttgcaaaaaa tgggtgccaa gcttgaaatg acaataactc aaaatgattt
     5341 tgaaactatt ggtgagatca gggtggagtc tagcaagctt aatggcatag aagttaaaga
     5401 taatatcgct tggttaatag acgaagcgcc tgctttggct atagcttttg ctttggctaa
     5461 gggtaaatct agtttaataa atgctaaaga attacgcgtt aaagaaagcg ataggattgc
     5521 tgtgatggtt gaaaatctaa agctttgtgg tgttgaagct agagaacttg atgatggttt
     5581 tgaaatagaa ggtggatgcg aactaaaatc ttcaaaaatt aaaagctatg gagatcaccg
     5641 tattgctatg agttttgcta ttttaggttt gctttgcgga atcgagattg atgatagtga
     5701 ttgtataaaa acttcttttc caaattttat agagatttta tcaaatttag gagctaggat
     5761 tgattattga attagcaaaa aactatggtt tttgttttgg tgttaaaaga gctattaaaa
     5821 aagcagaaca aataaaagat gccgcaacta taggccctct tattcacaat aacgaagaaa
     5881 tttctcgttt gcaaaaaaat tttaatgtca aaactttgga aaatatacaa tctttaagta
     5941 atgaaaaaaa ggctattata agaactcatg gtattacaaa gcaagattta gaagaattga
     6001 gaaaaaaaga tatagaaatt tttgatgcca cttgtccttt tgttacaaaa ccacaacaaa
     6061 tttgcgagca aatgagtaag gagggttatg aagttgttat ttttggagat gaaaatcatc
     6121 ccgaagttaa aggagtcaaa agttatgtaa gtacaaaagc ttatgtagtt ttggataaaa
     6181 aagaacttca aaatataaaa cttcctaata aaatagctgt ggtaagccaa acaactaaga
     6241 agcctgagca ttttatggag atagtaaatt ttttaatact taaaaccaaa gaagtaagag
     6301 tttttaacac tatatgtgat gcaaccttta aaaatcaaga tgccattaaa gaactctcgc
     6361 ttaaaagtga tgttatggtt gttgtagggg gtaaaaactc agccaataca aaacaacttt
     6421 ttttaattgc aaaaaccaat tgtgaagata gctatctaat tgaaaccgaa gaagagttaa
     6481 aaaaagaatg gtttttggat aaaaaacatt gcggcattag tgcaggtgct agtactcctg
     6541 attggatcat acaaaaagtt atcgccaaaa taaaaaattt taaaattaat taaaaaatgt
     6601 tttcaaatag aataaaaaag tcaaaaattt aaaaaaaatt aacaaaaata aaaaaactta
     6661 acactaatta aagaaaaata aggtaaaatc aatcaatttc taaaaattat tttaaaggat
     6721 cataatgagc gaggtgaaca aaaaagttca aggcggcgta gatgattatc ttgaggaaga
     6781 agattttgga cagcttttag aagcttttga taaatcaaga gaagaggctg caacagaggg
     6841 tgtgattgta gagatcaaaa atgatgaagt ttatgtagat ataggtaaaa aatctgaagg
     6901 tattttagct cttagcgaaa tacaagatga caattctaag ctattattta atgtaggcga
     6961 tggtattaaa gttgctgtta tgggttctcg tggtggcaga tctttacttt ctcataaaaa
     7021 agctttgaga aaagaaaaag ttatcgaatt tattaaaaac tatcaagaaa atcaagatga
     7081 tatttttacc gtaaaagtag ttggaaaaaa taaaggcgga ttgatagttg ttgatgaaaa
     7141 tgatgttgaa tttttcttac caaaatctca atatggcttc aaagaaacaa ataatattat
     7201 aggcaaaacg tttaaagtta aaattattaa aatcgacaaa gatgagcaaa gtatcattgt
     7261 ttctcgtaaa aaaactttag atgacgagag aagaaaacgc aaagaattga tcaataatgt
     7321 agcacaacaa gaagatttaa ttgaaggtat tgtgaaaaaa attactactt atggtatgtt
     7381 tgtggatgta ggaggtgttg atggtcttgt tcattacagc gaaatttctt acaaaggacc
     7441 tgtaaatcct ggaacacttt ataaagaggg tgataaggtt ccagttaaag ttataaagta
     7501 tgataaagaa cgcaaacatt tatccttgtc tataaaagcg gctttacccg atccatggag
     7561 cgagataaaa gatactcttg atgtaggtga taccattaaa gtaatagtat caaatataga
     7621 gccttatggt gcttttgtgg atttaggaaa tgatatagaa ggatttttac atatcagtga
     7681 aatttcttgg gataaaaata ttaaaaatcc aaaagattat atcaacaaag gtcaagaaat
     7741 tgatgttgaa gtaattgaaa tcaatccaaa tgaaagacgc ttaagagttt ctttaagaaa
     7801 tttactttct agaccttttg atgaatttat gaaatcttac aaaattgcag atgtggttga
     7861 aggggagatc acctcggtaa cttcttttgg tgcgtttgtt aaacttggcg gtattgaagg
     7921 tctattgcat aatgaagatg cttcttggga tagaaacgat aaatgtaaag acaaattctc
     7981 tcaaggggat aaaatcaagg taaaaattat caaaatagat gaagaaaacc aaaaaatatc
     8041 attaagcgca aaagaattaa acagttctcc agtgcaagaa tatgccaaaa ttcataaagt
     8101 cggcgatatt gtaaaaggca ctatccgtga tattaaagat tttggtgttt ttgtagagct
     8161 aagtaaaaat gttgatgctt taattcataa agaagatata agcacttcta tgcttgaaaa
     8221 tttaaaaatt ggcgacgata ttgaagctgc tatagttttt attgatgaaa agaaaaatag
     8281 aattcgccta agtgttaaaa atcttgttag aataaaagaa agagaagttc ttaatgaaat
     8341 caataatgat gataaagtaa ctttaggtga tatcattaaa gatcagctag cttaatgaaa
     8401 aaatacatta caatgagcat tttgagtatt ttattactca ttttgcttgc tgttgttttt
     8461 acattgcttt ggcaatttaa agctaatgta aatttcattc cacaatttgc taaagataca
     8521 aatacgcagc caagcattca aacccaaaat caagatcttt catggcaaga agaattagca
     8581 aaatggccta caagagattt taccccagca gcagaaaaat ttaccttata ttttgatgcg
     8641 gatactagcg agcttaagga gaaaaataaa tattatcaac ttatagttgg aaaatatgat
     8701 atttattcta tgttttgctt aagacagact ttaaattctt ttaatgtgaa gtattttctt
     8761 cttaaatctg gcgatagtcc agaaatcttt ttggatacag gcaatgaaaa acttatagat
     8821 gatattatca aagaattaaa aaaatataaa ataaatacag aagtaaagga aatttggtta
     8881 tgaaaaaaaa gattatagtg tgtgatgcta ttttggataa aggtgtcgat attctaagaa
     8941 aagctgaaga tattgagctt atagaagctg caaaatttcc aaaagatgaa cttatgcaaa
     9001 tactaagcga tattgaagtt gcaattacta gaagttctac ggatgtagat gtaaattttt
     9061 taaatcatgc caaaaaatta aaagcgcttg tgcgtgctgg ggtgggcgta gataatgttg
     9121 atattccaga gtgttctaaa cgaggagtga ttgtgatgaa tgtcccaact gcaaatacta
     9181 ttgccgcagt tgaactaaca atggcacatc ttttaacatc agctagaagc tttgtcaatg
     9241 ctcataattt tttaaaaatt gaaagaaaat gggaaagaga aaaatggtat ggcattgaat
     9301 tgatgaataa aacgctaggg gttataggtt ttggaaatat aggttcaaga gtagctatcc
     9361 gtgctaaagc atttggtatg aaaattttag cctatgatcc gtatatttct gcttctaaga
     9421 ttacagattt agatatggaa caagcaaaaa atttggatga aattttagaa aaaagtgatt
     9481 ttattaccat tcacacacca aaaaccaaag aaaccaatgg tatgatagga aagcaagaaa
     9541 ttgcaaaaat gaaagatgga ataagattaa taaattgtgc tcgcggagga ttatacacag
     9601 aagaggcttt atatgaaggt ttaaaaagtg gtaaaatagc ttggcttggt atagatgtgt
     9661 tcgataaaga acccgcgact aatcatcctc ttttagactt tgaaaatatt tcagttactt
     9721 ctcacctagg agcaaatact ttagaaagtc aagacaatat cgcaagagaa gcttgtgagc
     9781 aagcattaag cgcagcacga ggcgtggctt atcctaatgc cttaaattta ccaattaaaa
     9841 ctgaagattt accacctttt gtagctcctt atatagaact tgtttctaaa atggcttttt
     9901 tagctgttca aattgataaa aatcctataa aaagtattaa attagaggct gaaggaatta
     9961 ttggtgagta tgcaaattct atgctaactt ttgcagctgt tggtgctttg ggtggaattt
    10021 taggagagaa aattaattat gttaatgcag aatttgttgc caaagaaaaa ggagttgaat
    10081 tatcttgcga aactcttcca aatagtggtt ataataataa acttagcgtt aaaattatca
    10141 ccgaaaattc aaatatcagt gtttcaggaa cagtgtttaa tgaaaatgaa caacgcatag
    10201 ttggattaaa tggctttaaa actgatttta agccaaaggg aaaaatgatt atttttaaaa
    10261 acaaagacat accaggagtt atagctaaaa tcagttccgt tttggcagct aaaaatatca
    10321 atatagctga ttttaggctt ggtagagatg gttttgggta tgctttggct gttgttttga
    10381 ttgatgaaaa agttcaaaaa gaagtattag atgaactaaa acaattagag gcgtgtgtat
    10441 ttgtccaata tgttgaaatt taaaatttta attatagaag atgatataga tttaaacgaa
    10501 ctgcttgttt taaagttaaa atctagcggt tatgaagtta tatctttagc ggattttttt
    10561 ggagttgaag atttgctcga taatgagcaa attgatcttt taatagtcga tagaaatttg
    10621 cccagtggag attctttaga aaaaattcaa gatttaagag agcaaggata taaagaagca
    10681 gttatttttc ttacagccaa ggctttacat caagatttac tcgaaggctt tgaaagtggt
    10741 tgtgatgatt atgtttgtaa accttttgat ttcaatgagc ttttgcttcg cattaaagca
    10801 attttaaaac gccataaaaa agaagaagaa aaactatctt ttggtgattt tattttagat
    10861 ttggttagtt atgaattctt ttacaaaaat caaaaattag aaatctcaaa tcttgactat
    10921 gagcttttaa aatgtttttt tgaaaatcca aataccttgc ttactagaca atttttaagc
    10981 gaaagtgttt ggaaagatga tactacaagt gataaaacaa tcaatatagc tctaacaaga
    11041 cttagaaata aatttccaaa actaaaagat catattataa gtgttagggg tattggctat
    11101 aaattatgct aaaaactaaa aatattttta tagttttttt tgttgtattg gctttgattt
    11161 ttgggtttat tttttatact tttactaatt cttatcttaa tttcttgctt ataaaacaat
    11221 atgaacaaaa aatcaaaagc cttgatgatg ttttaaaatt ttctctctta gagcatttaa
    11281 atgatgctaa tatcaagaat tttgctaaag atactagggc tgattttatt atcctaaaca
    11341 atgatatgaa aataagttct gtaaaaaatc ctgatttttt ttctaatctt aaagaaggag
    11401 aaattttaaa tttcaattca aaaaaaattc tcactaaaag ctttatttac aaaggatata
    11461 aatatattat tattgtttat cctcgttttt tagatttaga acttttttgg acaaaaatgg
    11521 caatcggttt tggagtatgc ttgctgtttg tttttatttt aatgttgttg ttaggtagaa
    11581 gaatagagaa aaattttaat aaaattttgg attttttgga ttctataggg gatcataaag
    11641 ttgttatatt agaaaaagga atgtttaaag aatttaattt actaaatgag aaacttttaa
    11701 aaactaagga taaaattcta aagaataccc aaaaaaataa aaaacaaagc gataaaatca
    11761 ctttaaaaaa tactcagctt gctagcgtga tttctgctat ttctcatgag cttaaaaatc
    11821 cattaagcgt gattgatctt agcttagaga tgctaaaaga tgagaaattg gaagataaaa
    11881 aattaaaaaa ggaattacta gaaaaaattt cacgtcaaag cgttaaactt aatgctttaa
    11941 cccataagct taattttgtt tttaatctta atagtgaagc cttgcagatg caagaattcg
    12001 atcttttttc tctatgtgaa aaaatcacta aaaacccagg ctttgaaaga gttgcattgc
    12061 aaggtaaaag cacgaaagtt aaggctgatg aatttttaat cgagcaagtg attataaatt
    12121 tgctttctaa tgctttaaaa tatagtcaaa aaaaagtcat tttaacggca agagatcaaa
    12181 agataatagt gcaagatttt ggaaaaggca tagaagaaga taaaataaaa ttgattacaa
    12241 aaaaatttta taaaattgat gtaaaaagtg ataattcttt tggtttggga ctttttttag
    12301 taaagaaaat tttaaatata cataaaagtt atcttgaaat ttctagcact ttaggttatg
    12361 gttctagttt tagctttaaa ctcagtcaag gataaaaaat ggctcttata gatttaattg
    12421 aagcttcaaa aaaatttgga gacaaaatag ttttaaatga agtaaatttt agcgcaaacg
    12481 agggagaaaa gattgctatt ataggcaaaa atggagaagg aaaatctact tttttaaaaa
    12541 cgcttttagg cacacttcct ttagatagcg gtagaataat aagacaaaat ggaaaaagca
    12601 tagccatgct ttcacaaacc gttgatttta atgcaaattt aagcgtaaaa gaagccatca
    12661 agcaagagct tgtagaaatt tacaatacct tagaagaata tgaaatactg cataaaaaat
    12721 tagaagaaga tcctagtaat aaagattatc ttcaaaaaat agatacgctt atgactttga
    12781 ttgatagtaa agatgcttgg agtatagaat ctaaaataat acgcgtttta aaagaattta
    12841 gtttacttga gtatgaaaat cgcattatat ctactttaag tggtggagaa atacgccgcg
    12901 ttgggctttg catactttta ctaaaaaatc ctgatatttt attgcttgat gaaccaacta
    12961 atcatttaga tgtatatatg acaagctttt tggaagaatt gctaaaaaat tcaaagatgt
    13021 gtgtgatttt tatttcccat gatagatatt ttattgacgc tatagcacac aagtgtgtag
    13081 aagtagagca gggtaagctt agtattttta aaggcggata tgcaaactat ttagagaaaa
    13141 aaacacaaat tttgcaaagc cttgctaaga gccatgaaac tcttttaaag caattaaaaa
    13201 gcgaagaaga atggcttaga agaggggtta aagcaagact taaaagaaat gaaggacgaa
    13261 aagaacgcat ttttaaaatg cgtgaagaag cgaaaaaaaa tcctggggca atcaaacgct
    13321 taaaacttga aatttcaaga gcggctttaa attttaatag agaaaaaacg atcaatcgta
    13381 aaaaaatgct ttttgagctt aaaaatataa gcaaaaatat aaacaataaa aatcttttta
    13441 aagatttttc aacgcgtatt ttacaaggtg aacgcatagc tatcgtagga agaaatggtt
    13501 gtggaaaatc aacattgtta aaaattcttc tagggcaaat aaaacaagat agcggtgaaa
    13561 taaaacgcgg agagcttaag ataggatatt ttgatcaggc tagaagcttg gtaaattctg
    13621 ataaaagctt gcttgaaatt ttttgtccca atggtggaga tagggttgaa gttcgtggta
    13681 aaaatatgca tgtttatgga tatttgaaaa attttctatt tcctaaggaa tttttagata
    13741 aaagcgtggc tcttttaagt ggcggagaga aaaatcgcgt tgctttagcc ttgcttttta
    13801 ctaaagaata tgatgttttg attttagatg agccaactaa tgatcttgat atagctacga
    13861 ttaatatatt agaagaatac ttacttagtt ttgaaggggc tattttgcta gtatcacacg
    13921 atagatattt tgttgataaa atcgcaacaa aactttatgc ttttgaggga aatggatata
    13981 taaatatttt acacactctt tatactgaat atcttgaaaa tgaaaaagaa attgaagaat
    14041 tggataattt tgctttagag cttcaaaccc aagagcaaaa taataaccaa aaagaaaaaa
    14101 gctccaaaaa attgagctac aaagaaaatg agatattaaa aaaccatcct gaaaaaatag
    14161 attttttaga gcaaaagata gctaaattaa atcaagattt atccgatcca aatgtatatc
    14221 aagaaatagg tattaacaag ctttatcaag agcttgaagt aatgcaaaaa gaacttgaaa
    14281 ttctagaaaa tgagtatttt ttagtattag agaaaagcga gaatttataa ttaaagagat
    14341 tttatatttt ttattctatg gagcgggaaa cgagattcga acccgcgacc ccaaccttgg
    14401 caaggttgtg ctctacccct gagctattcc cgcaaaaaat aagtggtgcc cgaggtcgga
    14461 ctcgaaccga cacaaggttg cccttaccag attttgagtc tggcgcgtct accagtttca
    14521 ccactcgggc tcattttata agatttaaag ctaaaattat acttttttag gctaaaaaat
    14581 actttaaaaa taaaaagtat tttcaaaaag acaatataaa attatataat ttaaattttt
    14641 ggaacagtta ttgcttttgt ttattagcaa tgtttgaaaa gattttaact ttaatacttt
    14701 agaggaaaaa aatgagaatt acaaataaac ttaacttcac aaatagtgtg aataattcta
    14761 tgggcggtca aagtgcttta tatcagatat ctcaacaact tgcttcaggt ttgaaaatac
    14821 aaaattcata tgaagatgca agcacttata tagataatac gcgtcttgaa tatgaaatta
    14881 aaacattaga acaagtaaaa gaatcaacaa gtagagctca agaaatgact caaaatagta
    14941 tgaaagcttt acaagatatg gttaaacttc ttgaagattt taaagttaaa gtaacccaag
    15001 ctgcaagcga tagcaattct caaacctcaa gagaagctat agcaaaagaa ctagaacgta
    15061 taaaagaaag catagttcag cttgcaaata ccagtgttaa tggtcagtat ctttttgcag
    15121 gttctcaagt tgcaaacaaa ccttttgatt ctaatggaaa ttattatgga gataaaaata
    15181 atattaatgt agtaactgga gctggaactg aaagcccata caatatacca ggttgggatt
    15241 tattttttaa agcagatgga gactataaaa aacaaataag cactaatgtt agttttacag
    15301 ataatcgttg ggatttaaat aaagaccctg ataaaactaa atatctcaca ggagattcta
    15361 aatggcaaca acttatcgga caaggttatg taaaagataa tagcttagat gctgacaaag
    15421 actttgagta tgatgatagc aaactagatt ttcctccaac aactctttat gttcaaggta
    15481 caagacccga tggaacaagt tttaaaagtg ctgtactcgt caaacccgaa gatactttag
    15541 aagatgtaat ggaaaatatt ggagctcttt atggtaatac tccaaataat aaagtagtag
    15601 aagtaagtat gaatgatagt ggtcaaattc aaattacaga tctaaagcaa ggtaataata
    15661 aactcgattt tcatgctgta gctttcacac cacaagctga tgataaaact gaattaaata
    15721 atattatcca agcagcacag gatgaaggca ttacaatgga agatgttaca aacagggtta
    15781 tgactgctgc actaggaaat cccaataatg gagatattac aaatttaaat aatcctgtaa
    15841 ccattcaaat taacggacaa aactttgaaa ttgatttaaa acaaactgat tttatcaaaa
    15901 gtaaaatgac agatacagat ggaaatgctg ctaatggagc tgattacgat aatgtgtatt
    15961 ttgaaaaaaa tggcaatact gtttatggta atgtttctca agttatcaaa ggaagcaatg
    16021 cttatgccac tgattcaacc aaacttagcg aggtaatggc aggagatagc ctaaatggta
    16081 ctactttaaa tttaaaagtc aattccaaag gtggaaattc ttacgatgtt actataaatt
    16141 tacaaacttc aactgtaagc tatcctgatc ctaataatcc aggtcaaacc ataagctttc
    16201 ctattatgca tactaatcct gcaactggaa atagtggggt tgttacagga tcaaatgata
    16261 ttacttatgg tcaaattaat gatattatag gtatgtttgc tgcagataaa attcctacaa
    16321 caaccataca agccaataat agtcaaatta ataatgcaga ttatacccaa atacaacaac
    16381 tcatgaaaga ttcacaagct actgttgatg taagtatgga ttataaaggt cgtattagtg
    16441 ttactgataa actttcatca ggaaccaata tagaaatttc tcttagtgat tctcaaagtg
    16501 gccaatttcc agcacctcct tttaccacaa cttctactgt acaaaatggt ccaaatttta
    16561 gttttagcgc gaataattct ttaactatag atgaaccaaa tgtggatatt attaaagatt
    16621 tagattcaat gattgatgct gttttaaaag gcaatatgag agcagactcc gaaagtgaaa
    16681 accctagaaa tacaggtatg caaggagctt tagaaagact tgatcattta gcagatcatg
    16741 ttagcaagct taatacaact atgggagcat atcataatac tatcgaaggt gttaatacac
    16801 gcacatcctt tttaagcgtt aatgtccaaa gtataaaatc aaatgtgatt gatgtagatt
    16861 atggtgaggc aatgatgaat ttaatgcaag ttcaacttgc atatcaagct tcccttaaag
    16921 ctagtacaac aatttctcaa cttagcttat taaattatat gtaaaatttt ttatggtata
    16981 atttggcttt gattttattt tcaaggaaag aatattaaaa aagaagccat ttttaccagc
    17041 tccacgcttg ttatttttta tctttgtctt tgtatgctag cacctggcat gggagaatgg
    17101 gtttacaagg ctaatttatt tttatttgga gaatttgggt attattatcc attttctttg
    17161 cttatattaa attatctcta ctataaaaaa aaatataaaa tagaaaattt taagcgtagg
    17221 gagctttttg gtttttcttt ggcctttttt tctaccttgc ttttattttc tgtcttttat
    17281 agagagtttg ggtatatttt agaaattgta tatggatttt tttctataat cttagggcgt
    17341 acagggagtg gaatttttgc tcttttactt ctactatttt ctttggtttt attgtttcca
    17401 aaatttgcaa aagaaatttt aaaaatagaa ttagatttta cttatttatt aaaagtagag
    17461 caagctttta aatctttact tatgcgtgta tttggtggag aaaacgagaa agaagatgta
    17521 ggtaaatcag aacctatagc tccaaaatta aatattttgc aagatagtat ttatggaaat
    17581 ttacaaataa acaaaaaagg ggaaaccaat aacttagaac agataattaa agatagcaat
    17641 atcaatgcaa gtaaaaattc aattaccacg gccaaggaaa attttgaaaa actaaaaaat
    17701 caaattttag atgaaaccat agagattgat aaacaaagtt taaaagaatc aagaagtttt
    17761 gttcatgagc attctcaaca agtgcgaaat ttcgcacaaa aggctagtaa aatgagcatt
    17821 agtcttgatg aagattttaa ttttatttca gaagaagagg tagatatgat tcctgaacgt
    17881 tttttaaaac ctaaaaaact tgaagatata aagcaaatag atacaaataa aaatttagat
    17941 gagccaagtt ataaacgtaa aaatattgaa attccagttt ctaatcaaga agttaaacca
    18001 aaaattttta caaaagagct tgaacttaga gagaatttga taaaaaaaga aaaactagaa
    18061 caagaataca aagcctatca aaatgaaatt ttagaaaata aagtaaaaca agaaattaaa
    18121 aaattagaag aatatgatgc gataaattca agcgatatta tagaagggaa taaatatagt
    18181 tttaatagcc caaaaacaat taaaacagaa acagaagaat cagacaaaat aaatgaaaat
    18241 aaaaatctag ataaagcaga caatatcttt gaatttgctc ccattgtaga agagttaaat
    18301 catccttata tagaacctac tcctataaaa aatataaatg aaatagttat agaagaaaaa
    18361 aatacactcg attttatcca aaatacagaa actaaaatcg ataatgaaaa aacaaatgat
    18421 caagaaatta aacttcaaaa agcagtttta gccaaagaaa ttgctattaa ccaagcttta
    18481 ttgcgtgaaa tagagcaggg cgaagtagaa aaaccaaaag atttcacctt gccgccatta
    18541 gattttttag ctaatccaaa agaacacaaa caagaaatca atgaaagtga aatagataaa
    18601 aaaatttata atcttcttga aaaattgcgt cgttttaaaa taggcggcga tgttataagc
    18661 acttatgttg gtcctgtggt aactactttt gaatttcgtc ctagtgcaga tgtgaaagta
    18721 agtcgtattt taaatttaca agatgattta actatggctt taatggcaaa atcaatccgt
    18781 attcaagctc caataccagg aaaagatgtt gtaggtatag aagttccaaa tgatgaaatt
    18841 caaaccattt atttaagaga aattttacaa agtgaagttt ttaaaaacgc taaaagtcct
    18901 ttaaccatag ctttaggtaa agatatagta ggcaatgctt ttgtaaccga tcttaaaaaa
    18961 cttccgcatt tactcatcgc aggaacgaca ggtagtggta aaagtgtggg gataaattct
    19021 atgcttttaa gtcttttata tcgcaactct ccaaaaacct tgcgtttgat gatgatagat
    19081 cctaagatgc ttgaatttag catttataat gacattcctc atcttttaac tcctgttatc
    19141 acagatccaa aaaaagcagt caatgcgctt tcaaatatgg tagctgaaat ggaaagacgc
    19201 tatcgcttaa tggctgatgc aaaaaccaaa aatatagaaa attacaatga aaaaatgaaa
    19261 gaattaggcg gagaagaact tccttttatt gtagtaatta tcgatgaact tgctgatttg
    19321 atgatgactg cgggtaaaga tgtagaattt tatataggaa gacttgcgca aatggcaaga
    19381 gcaagtggaa tccacttgat tgtagctaca caacgacctt ctgttgatgt tgtaacagga
    19441 ctaattaaag cgaatttacc aagtagaatt tcttataaag tagggcaaaa aattgactct
    19501 aaagttattt tagatgctat gggtgctgaa agtttacttg gaagagggga ttgtttattt
    19561 actcctcctg gaacaagctc tatagtgcgt ttgcatgcgc cttttgcaag cgaatttgaa
    19621 atagaaaaaa tcgtggattt tctaaaggat caacaaagcg tagaatatga tgaaagcttt
    19681 ttaaaggatc aacaaagcgt aggtgttaca acaaatgaaa gctttgatgg ggaagtagat
    19741 gagctttacg aagaagctaa aagagtaatc ttagaagatg gaaaaacaag catttcttat
    19801 ttacaacgcc gtttaaaaat cggctataac cgctctgcaa atattattga acaacttacg
    19861 caaaacggga ttttaagcga acctgatgcc aaaggacaaa gggaaatctt gtaagatttt
    19921 tcttgtgttt ttgatatata aaactgatta caaaagaaga aatttaaaag gcaaaagccc
    19981 cgtaaaaagg gcttaaaaat tatttatctc taagatttaa ttcagtaatt aacttactat
    20041 aagaattata atcttttctt ttaagataag ataaaagtct ttttctttga cctacaagtt
    20101 ttagaagtcc taatcttgat gaaaagtctt ttttgtagat ttttaaatgt tctgtaagtt
    20161 ctgcaattct tgcagttaaa agagctactt gaacttctgt tgaaccagta tcacctggtt
    20221 ttttagcgaa tttcgcaact atttctgctt ttttggccga atccaaagcc atgatagacc
    20281 tcctgattgg taaaataata aaattaaaga actgtaattt tatcttaaaa agcaaaaaat
    20341 aaactgaatt tatctttttt agaaggtttt gtcaaaattt aagtcttttt ctaagaatta
    20401 tttattataa ttacagctat ttctgtagtt ataacaagga gaatctgtgc tatttaccaa
    20461 agctagcgaa tacgctttac tttctttaat ttatatttct caaaaagaaa cacctcaaga
    20521 tgtagattct ttagctttag agcttgatat tcctaaaagt tttttagcta aaattttaca
    20581 aactttagct aaagatggct tgttaaaatc ttttaaaggg gcaaaaggtg gttttgtttt
    20641 aatcaaagaa ccaagtcaat atactataaa agaaattgtt aatagtgctg aaaaaaagga
    20701 tatcagtgta tttgaatgca gtggtggcac ttgtccaaat aataaagaag aaaattgcac
    20761 cttaatgcct atgttagtaa atttacaaaa taaagtagat gaatttttag attctattac
    20821 tttagaagat attatgaaaa ataatggcaa aaaataaaat agtcgattta gtttttcctt
    20881 tcttggggcc tttaatcgct cctgttttaa aagctaaaag cttgactatt gttggttttt
    20941 tagtttgtat tttagctatt attatagttc ctttaccaag tcctattttg gactttttct
    21001 tggctttaag tatagcttta tcggtattaa ttattttaat ttctatttat atacccaaac
    21061 cgacagattt aacaactttt ccaactttaa tcttgattat cactttattt aggctttcat
    21121 taaatatagc taccacaagg atgattttaa gcgaagggca aaacggccct gaagctgtga
    21181 gtgagattat agcagcattt ggagaatttg ttgttggtgg aaatatggtc attggcgtga
    21241 ttgtattttg tattttagta ttgattaatt tcatggttgt aacaaaaggt agtacaaggg
    21301 tttctgaagt acaagcaaga tttacacttg atgcgatgcc gggtaaacaa atggctattg
    21361 atgcggattt aaatgcagga cttattgatg aacaaaccgc tagagcaaga cgtcaagaag
    21421 ttattgctga ggcaaacttc tatggtgcaa tggatggttc ttctaaattt atcaaaggag
    21481 atgctgttgc aggaattatc ataactatta taaatatcat aggtggtttt ttaataggat
    21541 cttttcagca cgatatggct ttaagcgatg ctgcttctac ctatactatt ttaaccatag
    21601 gtgatggact tgtatctcaa attccagggc ttattacttc tactgcaacc gctataatta
    21661 tcactcgtgc aagcaaagat gaggaaaatt ttgcagaagg aactttaact caacttttaa
    21721 gcgaatatcg cacgctttta atagtaggtt ttgtactttt tatctttgcg ttagtgcctg
    21781 gtttgccaac tttatccttg ggctttatgg ctttagtatt tttaagcctt ggctatctta
    21841 ccaagcaggt taaggaaggt aaaattgata taactacagt taaaaaaagc aaaccaagtg
    21901 ccgcagctgc atctcaaagt ggagcaggtg ggacaacggc aacgcctgct aagaaaagcg
    21961 aagaagaaat tctcaaagaa gaagagcaca agattaacga tatactcaaa gttgaaattt
    22021 tagaacttga acttggatac ggacttatta agcttgctga aaacgaactt acagaaagaa
    22081 ttcgctcaat gagaagaagt attgctgaaa gtttaggatt tttaatgcca aaaataagaa
    22141 taagagataa tttaagactt aaaccaaatg agtatagttt taaactcaag ggcgtgtcta
    22201 tagcaagtgc tgaaatttat ccggataaat atttagccat ggatagtggt tttatcacag
    22261 aagagataga agggattgct acaaaagaac ccgcttttaa ctctgatgca ctttggattg
    22321 atgcgaattt aaaagatgaa gcaacattaa atggctatat agtaatagat cctgcaagtg
    22381 ttatttcaac acatatgagc gaacttatca aagcgcacgc aagcgaactt ctcacacgcc
    22441 aagaggtaca aaatcttctt gataaggtta aaaatgatta tccaatcatc gtagaaggtg
    22501 ctttaggtgt cgcacctgta agtcttattc aaaaaattct caaagacttg cttaagcatc
    22561 acataccaat taaagatatg cttactattt tagaatctgt aagtgatata gcagaagtaa
    22621 gcaagagttt tgatatgatt attgaacatg taagggcgtc cttagctagg atgattacaa
    22681 atatgtattt agatgataaa ggaaatttgg atatttttat cttagactct gctagttctg
    22741 cggttttaat ggaaaatgta caatttagag atggaagtta tcacttgcct ttaagtgtgg
    22801 ctcaaacagg cactttagta gatactctaa gggctgaagt tgccgcggta gcaaatggtc
    22861 gtatcaagcc ttttatactt tgcgttgaac cgcagcttag aaaattcatt gctgatattt
    22921 gttataattt tagcattaat atagtagtgt taagttttgc agaaattgca gaaaatacaa
    22981 attttaatac cgagggtatt attaggatag aactttaagg aatataatga aaatttatca
    23041 tctttcacat acagatcttg atggttatgc ttgtcaattt atagtaaatt tttattttaa
    23101 aaatgtgaaa ttttataatt ctaattatgg taaagaaatt aatgaaaatt ttaactctat
    23161 tataggcgat atagaaaaag atgaaaattt cggaaaagct attattctaa taacagattt
    23221 aaatttaaat ttaaatcaat gtgaagaatt tgaaaaaatt tgcaaagaga aaaatattaa
    23281 aatttttctt cttgatcatc atcaaagtgg cgaagaatgt gctcaaaaat attcttggta
    23341 tttacttgat tctaaaagat gtgcaactaa aatcgtttat gattttttct ctaaaatctg
    23401 cactcctgtt ttagaacttt caaaatttgt tgatgtggtt aatgctgttg atatttggct
    23461 aagcgaggat gaaaattttg aacttggaaa ggttttttta ggcttgattg ccaatgcaaa
    23521 agaaataaat cgcgtgatgt ttaaagaatc tcaaatcgat tatatgtttt tcttgcttga
    23581 taaggcttgg aaatttatag gaaaagaaaa tgcgaatatt ttactcgata atgctactca
    23641 ttttataaaa aaggattatt ttgccagaaa aaatgatgat actctttcta atttaatttc
    23701 ttattttgta gttgaaaaac taagtgagct aaaagaaaat ttcagcatag aatatgaagg
    23761 tcataaaggc atcttaactt caaatatagg caatacttct gttattggaa atgatttttt
    23821 agtaaaaaat cctgattatg acttttttat tgatgttagt tctagaaaaa ccttaagttt
    23881 tcgtgcaaat ggaaaaatag atgtaagttt aatggctaaa aatttagtag gtggcggtgg
    23941 acataaaaat gctagtggtg gactttttgc gacatttaaa gatggagcaa attataatca
    24001 tattaaggct caaattattg atttaattaa aagcaaagaa cttaaaaagg aaaacaatga
    24061 atcaaaacaa taataaaacc ttaaaaaatg aactagaaga tttacaatat gagcttagca
    24121 tagttttaga agctatgctt ttatacgctg gagttaaaag agaaaaatta gaaaatgcaa
    24181 tagaagctta tattgataat atagataatg tgctcgaaaa ttccaacaaa gaaggggttg
    24241 atgaaatttt agaagttgtg gaatttctaa aaaataaata caaagatttt tttcaatgaa
    24301 aaagtgtatt ttaatttttt ttagtttata ttctttaagt tttgctaata tttatgaaaa
    24361 attaaatgat tttgcttatg aaaaaaaacc gaacaaagat tttaagattc aagaagttaa
    24421 attagtacaa ttttcacaag aaaataaaga ttgccttgaa cttttaatag aagctggtca
    24481 agttagaatt ttaaatagct ataattcttg tcaaaaatta tctaaagatg aaagttttca
    24541 aaaatttctt aatgaagatt ttttaaaact ttataaaaat aatggatact tgattaatga
    24601 aaatttacaa aatttggaaa ataccatgca ggatattatg atatattata aactccgata
    24661 ttcttttagt aaagatgtaa aagatatgag taaaaataag aatttggata ttttaaatat
    24721 agatgaaaaa gacggtggca ctttacttta caaaatcaat aatcaagctt gcgttggaat
    24781 agaacttaca agacatgact caagaatggc tatgaaaata tacggaatag aaaatttgga
    24841 taaagagtgt aaactattta tccaatcacc ttcttttaaa gatctttcct acacaaaaaa
    24901 agattttaag tggtattatt tagaataaat aaatgcttta atttttaaat aaaaattttt
    24961 aaaaatcgcg cttaaagtaa aagtatcttg ccttccaaga ttttg
//
LOCUS       DARATF010000012        24236 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.012, whole genome shotgun sequence.
ACCESSION   DARATF010000012 DARATF010000000
VERSION     DARATF010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24236
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.012"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..104)
                     /gene="tatA2"
                     /locus_tag="SB502_000384"
     CDS             complement(<1..104)
                     /gene="tatA2"
                     /locus_tag="SB502_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HEG0433867.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKAQVKKE"
     gene            complement(114..452)
                     /locus_tag="SB502_000385"
     CDS             complement(114..452)
                     /locus_tag="SB502_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HEG0433868.1"
                     /translation="MNNLSSVLILAKEECINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENVR
                     YYGSVFNQFS"
     gene            complement(445..1359)
                     /locus_tag="SB502_000386"
     CDS             complement(445..1359)
                     /locus_tag="SB502_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEG0433869.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDVFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLVAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPSGEFAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIVSGFGDSIMFRSIDE"
     gene            complement(1364..1888)
                     /locus_tag="SB502_000387"
     CDS             complement(1364..1888)
                     /locus_tag="SB502_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HEG0433870.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVENSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(1885..2667)
                     /gene="napH"
                     /locus_tag="SB502_000388"
     CDS             complement(1885..2667)
                     /gene="napH"
                     /locus_tag="SB502_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HEG0433871.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLS
                     DPFAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(2664..3404)
                     /gene="napG"
                     /locus_tag="SB502_000389"
     CDS             complement(2664..3404)
                     /gene="napG"
                     /locus_tag="SB502_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HEG0433872.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLTLKADDNYTLRPPGAED
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFNVKKATNYLNDGEL"
     gene            complement(3422..6196)
                     /gene="napA"
                     /locus_tag="SB502_000390"
     CDS             complement(3422..6196)
                     /gene="napA"
                     /locus_tag="SB502_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HEG0433873.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFDEFKKGLAPYTLEYTARVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(6443..6970)
                     /gene="tpx"
                     /locus_tag="SB502_000391"
     CDS             complement(6443..6970)
                     /gene="tpx"
                     /locus_tag="SB502_000391"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEG0433874.1"
                     /translation="MSTVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLINEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            complement(7069..7809)
                     /gene="peb2"
                     /locus_tag="SB502_000392"
     CDS             complement(7069..7809)
                     /gene="peb2"
                     /locus_tag="SB502_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HEG0433875.1"
                     /translation="MKKILILSLAAASFLNAEILVYGPGGPAPVLKELALKFEEKTKE
                     KVIVTAGPTSAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIV
                     RPNNPKNIKNFEDILKDGINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK
                     NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKALEN
                     KKALEFVDFIKSKEAQKVWKKYTWKEVK"
     gene            complement(7850..9880)
                     /locus_tag="SB502_000393"
     CDS             complement(7850..9880)
                     /locus_tag="SB502_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEG0433876.1"
                     /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELARETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
     gene            10009..11028
                     /locus_tag="SB502_000394"
     CDS             10009..11028
                     /locus_tag="SB502_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433877.1"
                     /translation="MNLKIFSIIVGILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNSYSPSIQTNNSSSDININNNTIQKQETNLLDENQSLNNNTFNTSISE
                     NNQSLNNNTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERER
                     AVKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRINL
                     LKDMLSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPY
                     LNNPKELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEIIE
                     ISSIK"
     gene            11051..13663
                     /locus_tag="SB502_000395"
     CDS             11051..13663
                     /locus_tag="SB502_000395"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEG0433878.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYTKFVDKEVILPISKKAIKIIADKHVEKDFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFDEKGILNEHCLEFQGLERLEARERIVAKLKSLGFIEKIEEH
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQSTNALHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVSIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIIMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            13668..14678
                     /locus_tag="SB502_000396"
     CDS             13668..14678
                     /locus_tag="SB502_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEG0433879.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNVKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            14675..15586
                     /locus_tag="SB502_000397"
     CDS             14675..15586
                     /locus_tag="SB502_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0433880.1"
                     /translation="MNEENISIVSAFFSRISQFFNEFSWQDIKEVSLSSITSFNENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGVSIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFKK"
     gene            15779..16552
                     /locus_tag="SB502_000398"
     CDS             15779..16552
                     /locus_tag="SB502_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0433881.1"
                     /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGIKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILV
                     VRVGHENDPKIKALIQALQSDKIKQFIIEKYNGSVLPAF"
     gene            16601..17371
                     /locus_tag="SB502_000399"
     CDS             16601..17371
                     /locus_tag="SB502_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0433882.1"
                     /translation="MNLFKIIILAYILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     HSEDKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            17381..18157
                     /locus_tag="SB502_000400"
     CDS             17381..18157
                     /locus_tag="SB502_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0433883.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTKLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAIITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATRKGEETSQKSLVIKEILTSDKIKNFIIEKYKGSVIPTF"
     gene            18229..18891
                     /gene="flgA"
                     /locus_tag="SB502_000401"
     CDS             18229..18891
                     /gene="flgA"
                     /locus_tag="SB502_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HEG0433884.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERAIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGILSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            18888..19451
                     /locus_tag="SB502_000402"
     CDS             18888..19451
                     /locus_tag="SB502_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEG0433885.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKTE
                     NQANLEEICQENFKYTYFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
                     QMENFIAGKWLDLLEIKHNLYEKWQNF"
     gene            19491..19967
                     /gene="coaD"
                     /locus_tag="SB502_000403"
     CDS             19491..19967
                     /gene="coaD"
                     /locus_tag="SB502_000403"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEG0433886.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            19958..20536
                     /locus_tag="SB502_000404"
     CDS             19958..20536
                     /locus_tag="SB502_000404"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEG0433887.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPINKRAELLLFLADRAQHFEEILKTNQNKLIISDRSFISGMAYAKDFENDF
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISVEILTLDAKESKEKLHQQIKEFLQ"
     gene            20533..21759
                     /locus_tag="SB502_000405"
     CDS             20533..21759
                     /locus_tag="SB502_000405"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEG0433888.1"
                     /translation="MINALKGMKDLLDKDAYYYEKVIKTCEKVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQ
                     LNSLGCSQCLPKYRDRLVEFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQNLLENAP
                     LLINNLCTSCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKEEKIQREGIYLCAMDEIYIQ
                     KLLHIATNLRKEYKVLLSYEARKLAKHLENADKNNTEIFLCMGENEAQNESLFYKNLA
                     KKEEKMIKISDLKKVL"
     gene            21756..23591
                     /gene="speA"
                     /locus_tag="SB502_000406"
     CDS             21756..23591
                     /gene="speA"
                     /locus_tag="SB502_000406"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEG0433889.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSM
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            23592..24230
                     /gene="cysE"
                     /locus_tag="SB502_000407"
     CDS             23592..24230
                     /gene="cysE"
                     /locus_tag="SB502_000407"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEG0433890.1"
                     /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRIFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGTKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPESQK"
BASE COUNT         8827 a         3985 c         3554 g         7870 t
ORIGIN      
        1 tgttcttttt taacttgcgc ttttaaatct tgatttttaa aatacacata atcaattcca
       61 aaaataacac caattataat aagcaatggg attaaaaata ccatctttac actttaagaa
      121 aattgattaa atacactacc atagtagcga acattctcag cattttcatt tttttctatc
      181 gtttctattg caccactatt gattgctttt tggatatcat catttaaatc ttgataagaa
      241 aaaaccatat taatactgat aatatttggc aatttctcaa gcattttata agagtttaac
      301 tcatcttcta aattttcact ttcaatcaca actataatct tttcattttc acaaagttct
      361 acagaacaaa aaggaatttc agatatagcc ttttttaaat catttataca ttcttctttt
      421 gctaaaatca aaacactaga aagattattc atcaatactc ctaaacatta tactatcacc
      481 aaagcctgaa acgataaaat ctttattgtt taaaaaaata ataaactcac tcatcaaatt
      541 ttcattatta aaagttttaa caggcttaaa atcacttgtg ctaaaaactt cactaactcc
      601 agcttcatta tcgctataaa cagcgaattc tccactagga cttaaagcac aagtatatat
      661 caaaaaatct ttttgcaaaa aattttgctc ttcatttttt acaactccta tacgcctatc
      721 cgttccacaa cttaaaataa cattattttt aaaatctact tgatagatat tatctttatg
      781 cattttatca tagtttttta acatcttcca atttttcaaa tcaaaaagtt ctacttcgcc
      841 actctcaaaa cctgcaacta gtctactctt atcttcattt aaaactgcat cattaagact
      901 agaatgggaa aaattaaatt tttttatatt ttttaaactt ttatcaatca attctatttc
      961 agaaccaata gaaatcaaaa gataagtgtt ttcattgata aaaaatgctt ttattatgct
     1021 attttcttcg agctttttga tttgtaaatt ttccttataa aaacttaaat ttttagcacc
     1081 aaaatcaccc tcgctaagta ttaaaagtgt atgtttaaaa acatcaatgt tataaatctt
     1141 agcaaaatca tcaccataat aatttttaat ctttggtaaa gataaaagtt cttttaaact
     1201 tttatcttta atgttatatt gtaaaatttc acctttatca gtgcctatat ataagttttg
     1261 cttatcaagc tttaaagctg ttatattagc atttaatttc agctcataag cataagacaa
     1321 aacacaaaaa agactcaaaa taaaaagaaa ttttttcatt tatttacttt acaccctcat
     1381 taatcacatc aattaaattt gaacgacttt ttaattgttc atttttaaat tcaggtttaa
     1441 agctattttc cactaaaggt tttgcatcac tttgtggaac atgacactga gtgcaattaa
     1501 aacgactatc gctaatcata tctcctgtgg ttttattgtg tctaaaatca taataatgac
     1561 tagcaggaag tggagttgca ccagcatctg ctgctatagc cttatcatgg cagcttaagc
     1621 acatattgtt atctttagtt ataggtaaca aatcttcaat agcatgcgga attaacggtg
     1681 gtgcattttc ataagaacgc tcaaaacgag tagattcccc aggctgtaaa gttgtgaaat
     1741 ttgcctccac taaatttact ttattttcat tttctaaact tgcttttcta agtccaattt
     1801 gttctgaact taccccacta ttcattgcac aagcggcaaa aaataccact gcagcacttc
     1861 ctaataaaac caatttcttc ttcattattt attccttaaa tcaaaaatat taaaattcaa
     1921 agcatcatca ttacaaactt ctatacatct tgcacacctt atacactctc ccgatttcac
     1981 gctagtactt tcttttccaa ccatccacaa aacctgtttt tcaggacaaa tacggataca
     2041 ttcataacat ttagtgcatt tatcactatc atgctttatt ttaagcaaag caaaacgaga
     2101 aataaaagca taaaaagctc ctagtggaca aaaatgtgaa caaattgccc taggacttaa
     2161 aaaagtatcg atacaaaaaa gtataaaggc tacaaaaatc caagaacttg tagcaaaaat
     2221 aatccctcta tgtatcattc ctatataaga aaaactttca aacacaggca atgaaaatac
     2281 aaaagaaagg actaaaacca agaccaatac aaaatagcgt aaatttttag gcaaaattaa
     2341 aaatttatta ttaagggtta atttatttcg cacaaaagca gcaaaatctg tgattaaatt
     2401 aacaggacaa acccaagagc aaaaaaccct tcctaaaagc aaaccataga taaaaaatat
     2461 aatcaaagct cctattaaag ccattaaatc tatactccag cttgctagaa tgatttgcaa
     2521 aactgcaaaa ggatcgctta aaggtatggt attaaaaagt ctagaagaac ttaaatttcc
     2581 ctgcaagata aaatctgtag ctttaaaact aaaaagcgct aaaattccaa gctgaacgat
     2641 gcgtctagca attaaatact tcatcacagt tctccatcat ttaaataatt ggttgctttt
     2701 ttaacattaa aatgttttga agtatctgca ttttttatac gaccttcatc tttttcatcc
     2761 cagcctttta cataatgaga tcctgctttt cccaatacat actcccttgg caaaacacga
     2821 atggccggtt tttcagtaat acaagccagt tcacaaagcc cacaacctac acacacttca
     2881 tgatccacac taggtagtaa aaaagcatgt ttggcggtgc gttcattgcg tttaagctca
     2941 agttttaaag ccctatctat caaaggacag gctctataac aagcatcaca ttgaattccc
     3001 cagtgtgcca cacaagaagc actatcaaca atagcaatac ccattttcaa agattctata
     3061 ccctgctcta aatgcttttt atctaaagca tcagttggac attctctaat gcaaggaata
     3121 tccttacaaa gatagcaagg aatttctctt gccttaaaaa aaggcgtgcc attttttgga
     3181 ctatctaaca agctagcaag ctttaaagta tcataaggac aggcttttac acaaagccca
     3241 caacgaatac atttgcttaa aaatctagct tcatcttcag ccccaggagg acgcaaggta
     3301 taattatcat cggcttttaa agtcaaatta gccaaaaatc cacctcctgt acataaacat
     3361 gcagccttaa aagcactaac aaaaaattct cttctacctt tcatttaatc aaaaccctaa
     3421 attaagcctt ataaattttt acagcgcatt ttttaaagtc agtttgtttt gaaagtggac
     3481 aagtcgcatc caaagtaact ttattgatat atacattctc atcaaaccac ggcacataca
     3541 caagtcctac aggcggtttg tttcttccac gcatatctac tcttgctttt actttaccac
     3601 gacgagattc cacccaaacc aaatcacctt gatttaagcc taatttctct ccatctttct
     3661 cactcatata gcaaagtgct tcaggcacag cacggtaaag ctcaggcaca cgcatagtca
     3721 tagttccact atgccaatgc tctaaaaccc ttcctgttgc aagccagaac ggatactctt
     3781 tacttggtct ttcaggtgct ttcataaatg gcctaaagaa aattttagcc ttatttttaa
     3841 tactgtgctc tttttcatct ttaggagcta ttaaatcccc atttgtaagc attttgttaa
     3901 aatcaccata aaaagcaaaa tctgaatttg gagccgcttt tttagcataa taatcaaatt
     3961 tagtattaaa tctccactgt gtttccttgc cattaaccac aggccatctt aaacccctta
     4021 ctttatgata ggtatcaaaa tccgctaaat catgtccgtg tcctaagcca aatttacgat
     4081 attcttccca aagatatttt tgaacgaaaa agccatagcc tgtaaattct tttccatcac
     4141 tgccttgaat ttttctctca tcacctttaa catcggtatt atcaaagcct tttgcgatgg
     4201 catcgtttgg attaaagctt tttgcttctt tattggcaaa tagtacatca aaaagtgtat
     4261 catcttcgct ataacccata gcttttgcct cttctaaaac acttggcaag gtaagcttat
     4321 tatccacttt ttgctctttc caaacttctt taagcttaaa gcgttttgca aattctaaaa
     4381 tttgccaagt atcactcatg gcagcaccca caggtaagac ttgttgtttc caatgttgag
     4441 ttcttctttc agcattacca taagcacccc atttttcata aatcatagca cttggtaaaa
     4501 taagatcagc tacttttgct gaaattccag gataacaatc acttacaaca ataaaattat
     4561 ccatttctct tgctgctgca atccagtgat ttgcatttgc agtgttttgc catggattat
     4621 tcacttgcac ccatgcaaat ttaatttttc catcttctaa atctctcatg atattaagat
     4681 aaggagaacc tggttttggg ttgatagtct ttgcaggaac tttccaaatt ttttcagaaa
     4741 tttctctgtg ttttggattg gctacaacca tatctgcagg caaacgatgt gagaaagttc
     4801 ctacttccct agctgttcca caggcacttg gctgtcctgt taaagaaaag gctccactac
     4861 ctggtttagc ttgctttcct agcaaaaaat gtaccatata agcttgttca tttacccaag
     4921 aacctcttgt gtgttgatta aagcccatag tccaaaaact tacgactttg cgatttttct
     4981 ctatgtaaag attagctaat tcttgaagtt ttttcttaaa atcttccaaa gactcattat
     5041 catcaccttt ggctactctt gcagtgtatt ctaaagtata aggggctaaa ccttttttaa
     5101 attcgtcaaa agaaatttcc cagtttttat cagccacacc ttgatgtttc atttcaaatt
     5161 tatcacccgc tttaacgcca agataagata aagaagtagc ctcttcatcg tctaaagtga
     5221 ttacattttc tttttcaacc gtatcttttt cactttcttt aaattttgga tgatttggat
     5281 tatttctcat accataacca atatcagcat aaccagttgc aaatacgcag tgatctttga
     5341 taaatttcat atccatagcc tctggatgat tataaacaat ctctcttgct atgtagttcc
     5401 aaatagccaa atctgtattt ggtttaaaaa taatttcaat atcagcaata tttgaagtac
     5461 ggttagaaaa agtgcttaga ttaacaactt taaccttatc aagattgctt agttttctat
     5521 cacttactct tgaccaaagg attgggtgca tttcagccat attagctccc caagtgataa
     5581 tagtatctgt aagctctata tcatcataac agcctgatgg ctcatctaca ccaaaagttt
     5641 gcataaaacc aaccactgca gaggccatac aatgtcttgc atttggatcg atattatttg
     5701 ttctaaaacc cgcttttgca agctttaaag cagcataacc ttcttggata gtgtattgcc
     5761 cactaccaaa aatccctata cctgtaacgc cgagttcatt gtaggctttt ttaaattgtt
     5821 tttccatttc atcaaaggct ctttgccaag aaacttgttg aaatttgcct tttttatcaa
     5881 attcgccttt ttcattcatg cgaagcaaag gcataacaag acgatcttca ccatacatga
     5941 tcttagcatt aaaataacct ttgatacaat taagtccgcg atttacgggt gctgcaggat
     6001 caccttttgt tgctacgatt ttgccatctt ttctagctat cataattcca cagccagttc
     6061 cacaaaatct acaaacagct ttatcccatt tccaatcttc ttcttgcgcg ccaagcatag
     6121 agcttggaac actaagccct gcaacactag cagcacttgc aatagcggta tttttaataa
     6181 aatcccttct attcatcctt attcctccaa aataaaaaaa tcatcttatt ataaaaaatg
     6241 aagtataaaa atctcttgaa attttaataa aaataataat tttaaagctc tattttatag
     6301 gagttttatt gtccttttta tattattctt acacaaaata aatatcaaaa ataatcaact
     6361 taacaattaa aatataatca acttaaaata ataaaaaaat gaagatataa aaattaagcc
     6421 ctaagaatgg gcttaatcaa aattaatggc aaccacaacc accgcagcag ctagaaccac
     6481 caaaaaatgc atcaagtttt gcaatatctg gcatttctgt gatttcattt acaagttctt
     6541 tatatgccac tttaccctct ttaatcacaa atacggcacg agctaaaagc ccttctaaag
     6601 caccttcatt tatcaaaaca ccatattttt caccaaattc ttttgccaca aaatcacttg
     6661 caacacttaa attttcaata ccttctgtac tgcaaaatct tcccatagca aaaggtaagt
     6721 ccatacttac tacaatcact tcagcaccat tgtaactggc tactttttta ttaaattctc
     6781 tagcctctgt agcacaaact ggtgtatcta agcttggaac acttaaaatg atttgagttt
     6841 tacccgctgc accgatttca atcacgctta aatctttagc tttaagattt accttaggag
     6901 catctgctcc aacttctact gaatttcctt taagttttac aggatttcct ttaaaattta
     6961 ctgtactcat ttaatttcct tttttgatat tttaaacatt attgcaatta atgttttagg
     7021 agtgattata tcctataaat attaattatt ttttaatttc actcaaaatt attttacttc
     7081 tttccaagta tattttttcc acactttttg agcttcctta ctcttaataa aatctacaaa
     7141 ttctaaagct tttttatttt ctaaagcttt ttttgtagga gcaatttcag ctgcacgata
     7201 aatcactgca tttttatctt tgataaataa agctttatca tcgcctaaag cctttgccca
     7261 atgagaccaa atgattaaag catcaatatt tggattgtta ttccactcat ctacagcagc
     7321 tttggaattt ttagcataaa tttttatatt tttacgtaat tttaccaaat tttctctttt
     7381 tgcacttttt aaagccatat cttcataaag tccaacttgt cctgcaccat caaccaccat
     7441 aacatttata ccatctttta aaatgtcttc aaaattttta atattttttg gattatttgg
     7501 acgcacgata atacctgatg gacgcacatt taaaacgctt aaattttcca aacttaaact
     7561 tggaattttt ttagcaaaat catccatcat tgaagtattg cctgaaaaaa tcaaatctgc
     7621 attttctttt gctttatcta tccaagctga agttgggcct gcggttacaa tcaccttttc
     7681 ttttgttttt tcttcaaatt ttaaagcaag ctcttttagc acaggagcag gaccacctgg
     7741 accataaact aaaatttcag catttaaaaa acttgctgct gctaaactta aaattaatat
     7801 ttttttcata aaataaacct ttctttataa taatataaag gaaattttat caatctatag
     7861 ttaactctcc cttgcaaagc cctgcttcta taagaaaacg agaaggagca aaagaagttt
     7921 ttttgttttt atcatattta gcatagctta aataaagtat attttttgcc ctagttactg
     7981 caacataaaa aagccttctt tcttcttcta agcttccacc cattcccata agcttttgat
     8041 taggaaagcg accttgcgca agatcaatca caaaaacaag atcaaattcc aagcccttac
     8101 ttgcatgtac gctaagcaaa ttaactcctt tgccactact catttcactt gcacctaaag
     8161 ttagaaaatt ataatattta taaatatcgc tataattttt tgtaagctct tttaagacat
     8221 taaattttgt ttctattttt tctaaatttt cactctttct taataaatcc acctgccctg
     8281 ctttatttgt cgctcttttg gttgcaagtt cttcgcaaat ttctctataa aaagaatttt
     8341 cgcaaattaa attgactaaa gtcaaagaat gttttatttc catagctttt tttaaaaaaa
     8401 gatagatttt ttccaaattt ctagcgcaca aatcattgat ttttgaaagt cttaaaatag
     8461 gatgtgcatc aaattcactc tcaaatttaa aacgagtttc tctagctaat tcttctaaat
     8521 ctgcaaaaag cccaagttga taatttcttt tttgatgatt ttgcaaattt acatttttat
     8581 caggatctaa aaaacctttt attaaatttc catgccctaa ttttaaaagt gcgtcaaaaa
     8641 tttcttttgc taaaactcca cccacacctt tggtatattg aaccaaatga ataaaagcca
     8701 tgatatcttt aggatttacc acaagcgcaa gcatggagct aaaagcttta acttccaaac
     8761 tttcaaaaaa acttccactt ccctttctca cacttgcaat gccctgctcc cttaaagcta
     8821 cttcaacccc atcagcactt gagttgttgc gaaaaatcac ggcaatttct tccaaactta
     8881 ctccgcttgt aagtatcatt ttggctatat tttgatactg atcaaataat tcttcaaaag
     8941 taagcaaaga tggggcttta aactcatcat ttcttgtaac aataagttct tttggatata
     9001 atctttcgtt atttaaaatc actttattag ccaaagctaa aatacttctt gatgaacggt
     9061 agtttttatt taaagaaaaa atttttgcat ctttaaaacg atctttaaac ccacctatga
     9121 tattaatatc cgctccatta aaagcataaa tactttgatc ataatcccct acgcaaaaca
     9181 aacttttact atgaaaagcc tctattaaag aactttgcaa agtatttgtg tcttgatatt
     9241 catctactaa aatttcatca aattcatatt tttcttcttt taaaagatct tttagattga
     9301 taagcaagtc attaaaatcc acataattaa aacgcttttt ttcattatca tattctttta
     9361 aaatatcttc ataaatttca gcataaatac tttgatcttc atagttttga caaaaccaag
     9421 tataaaaatc ttgattgtgt gctttgtttt gaaacaaaga ataaagatcg tataaataac
     9481 ttgattgata aggttttata tcacttaaat gcctaaaagt tcttttttca tagacacttt
     9541 taagtagagt ttttaactcg cttgcttgct ttaaggctat atttttatcc gcatttctaa
     9601 gtaaggtata agccgtacta tgaaaagttc ctgcaagtat tttactggta atatttttat
     9661 caaaaaattt ccctaaacgc cctatcattt ctttgctggc tttatttgtg aaagtcaaaa
     9721 gcatgatttt ttgaggtgcc actcccttgc ttaaaagata agaaattctt gcaacaatag
     9781 tagaagtttt tcccgtgcct gcacttgcaa taacaagatt gtgtccaaaa tcagcagtag
     9841 cggcaagata ttgttcatta tttaattttg aaagtggcat tattttcctt ataaaagtta
     9901 aaattataaa aaaaaattac ttaaaaatat aaaaatttaa aattacttta tattagatta
     9961 tagtacaatg ctaaaattat ttaactttct gtttttaagg gatagcaaat gaatttgaaa
    10021 attttttcta ttattgttgg catattaatt gctgttattg tgatattagg tggaacatat
    10081 tattatcttt ttgaatattc aaaaccaaag aattacacct taaataccaa cacttacacc
    10141 gaacaaaaat cgtataccaa taactacgat aattcctatt caccctcgat ccaaaccaac
    10201 aatagttcat cagatataaa tattaataac aataccatcc aaaagcaaga aacaaaccta
    10261 ttagatgaaa atcaaagctt aaataacaat acatttaata catcaataag cgaaaacaat
    10321 caaagcttaa ataataacac caatacaagt aataatatta atacaaatga aaataagcaa
    10381 attttagata cggataaaga aaaattaaaa caagaaaata aacaagccaa aatagaagct
    10441 cttaaaaaag aaatcagcaa acaacaaaag atcttagaaa gagaaagagc tgtaaaaaaa
    10501 gaacttcaat caaacaaatc aaacaaaaat aaatatctaa ataccgctag agagtatcta
    10561 agcataggaa aaaacagtcg tttagaacct gagcttagca cagaaaatat gaaagtttac
    10621 attttagatg gaaaattttt aagccaatac agaatcaatc tgttaaaaga tatgctaagc
    10681 gttatacaag ataatgcaaa agattattat ctaagtattt ttgttaaaat gctaccaaaa
    10741 ggggaaatga aattaactat ctataacaaa gaaattatct tttcagatat gaaaaaagct
    10801 tataaatata ttagtttaga tagattaagc ccatatttaa acaatccaaa agaattaaat
    10861 gaacatgtag cacgtgaaga aattttagaa agacttaaac ttcaaattaa aaaagacggc
    10921 aaaggaagtg atttttctaa acatatcaaa agtttgaaaa ctggacttaa tacagcacaa
    10981 tatttcttcc cgttttgtga aattatagaa attagctcta ttaaataagc taaaacaata
    11041 aaggcaaata atgtatgata aaaatttaga aaaagagtat tatcaaattt gcgaagaacg
    11101 cggatatttt gaaatcgatg gcaataaaac catacaagaa aaagataaaa atttctgcat
    11161 tatgatgcct cctcctaatg tcactggagt tttacacata ggacatgctt taacttttac
    11221 tctgcaagat attatgacgc gttacaaaag aatggatggc tataaggttc tttatcaacc
    11281 agggcttgat cacgcaggta ttgccactca aaatgttgta gaaaaacaac tccttgctca
    11341 aggcattaaa aaagaagaac taggtagaga gaaatttata gaaaaagtct gggagtggaa
    11401 agagcaaagc ggtggaaaaa ttttagacca aatgagaaca ctaggcatca ctcctgcatg
    11461 gagtcgcttg cgttttacta tggatgaagg tttggttaat gccgtaaaaa aagcctttgt
    11521 agaactttat gataaaagac ttattgtacg tggaaactac atgataaatt ggtgtaccca
    11581 tgatggcgct ttaagtgata tagaagttga atacaaagaa aacaaaggaa aactttatca
    11641 tattaaatac tttttaaaag atagcgatga atttttagta gtagccacaa cgcgtcctga
    11701 aacttttttt ggcgatactg cagttatggt gcatcctgat gatgaacgct atactaaatt
    11761 tgtggacaaa gaagtgattt tgcctataag caaaaaagcc attaaaatca tagccgataa
    11821 acatgtagaa aaagattttg gaacaggagt tgtaaaagtt actcccgctc atgacatgaa
    11881 cgattatgaa gtaggactta gacataattt agattttata agtgtttttg atgaaaaagg
    11941 aattttaaac gagcattgtt tagagtttca aggtttagaa cgcttagaag caagagaaag
    12001 aatcgtagcc aaacttaaaa gtcttggttt tatagaaaaa atagaagagc ataacaatca
    12061 aataggatat tgttatcgtt gcaacaatat agttgaacct tatatctcca aacaatggtt
    12121 tgtaaaaaaa gaaatcgccc aagaaagtat agaaaaagtt gcgcttggag aaagcaaatt
    12181 ttacccaaat cactggataa atagctttaa tgcttggatg aaagatttaa gagattggtg
    12241 tatttcaaga caactttggt gggggcatca aattcctgtg tattattgcg aatgctctca
    12301 tgaatgggca agccaacata cgcctaaaac ttgtccaaaa tgtcaaagtc aaaatttcaa
    12361 acaagatgaa gatgtacttg atacttggtt ttcttcagga ctttgggcta tgagtactct
    12421 aggctgggga aatgaaaatt ggggtaaaga taaaatttgg tctgaaaagg atttaaaaga
    12481 tttttaccct aattctttac tcattacagg ttttgatatt ttatttttct gggtggctag
    12541 aatgatgttt caaagcacta atgccttaca tcaacttcct tttaaagata tttatttaca
    12601 tgctcttgtg aaagatgagc aaggtagaaa aatgagtaaa agccttggaa atgtcatcga
    12661 tccaaatgaa agcattaaag aatatagtgc tgatatttta cgctttactt tagcacttct
    12721 tgctatacaa ggacgcgata ttaaacttag caatgataaa cttttacaag ttagaaattt
    12781 tacaaataaa atttataatg ctacaaatta tctgctttta aatgaaagta aatttgaaga
    12841 tttggaaaat atcacacttc attcagaatt agcaaaatat atttatgcca aatttcaaac
    12901 ttgtgttaag gatgtaagag aaaatttaga caattatcgc tttaatgatg cagccaatac
    12961 tctatataaa ttcttttggg atgatttttg cgattggggt atagagctta gcaaagccga
    13021 aaaatcgagc gttaaagaac ttggtagtat tttcaaagaa gctttaaaac ttttaaatcc
    13081 tttcatgcct tttatcagcg agtatttata ccacaaacta agcgatacag aacttaaaac
    13141 aagcccttct attatgataa gcaaatatcc aaaatttaaa gaacaagata aaaatataga
    13201 aaaaatcttt tctttgctca tagaaagcat agttagtatc cgccgtgcta aaagtttaat
    13261 cgatcttgga aattctaaaa tagaaaaagc ttatatcaaa tttaacgata aaaaaatcaa
    13321 agatgaaatc aaagcttata tgaattttat cataatgctc gcaaagtgcg agcaaataga
    13381 atttagtgaa gaaaaattac caaaggcaat atgtgatgtt agcgagaatt tagaaatttt
    13441 tattacgctt gaaaatgttg atttaagtgg tattttaaca agacttgaaa atcaaaaaaa
    13501 taagcttgaa aaagaaagtt tcaagcttaa ctccatgctt tcaaatgaaa aattcatcgc
    13561 taacgcacct aaagaggtgg tggagcaaaa taaagaagct ctagaaaatt taaaaattca
    13621 acttgaaaaa atatcagttg aacttcaaaa tctaagaggt taaaaatttg ataaaaataa
    13681 aaaatttaaa aaaatattat ggcaaggaac tcgtgataaa cgatgtttct ttggagatta
    13741 aaaagggtga aatttacgcc atagtaggtc atagtggagc tggaaaatcc actcttttaa
    13801 gatgtattaa tggacttgag aattatcaag aaggaagttt aaaagtcttt gatcaagaaa
    13861 ttaaagattt aagtcaaaaa aaatcaaaag agttaagaat gcttagaaaa gatataggga
    13921 tgatttttca aaattttgcc ctaatggagc gcaaaaatgt atttgaaaat gttgctatgc
    13981 ctttaagaac acactatact cagtgtaaat ttcatgccaa gctttttaat aaagaataca
    14041 tgagcgaaaa agaaattgcc caaaaagtca attccttact tgaaatcgta gggcttgatc
    14101 ataaaaacaa atcctaccca agagaactga gcggagggca aaaacaacgc gttgctattg
    14161 ctagagcctt agctttaaac ccaaaaattt tacttagtga cgaagctact tcggctcttg
    14221 atccaaacac tacaaaaaat attttagagc ttatatctaa aatcaatgct gaatttggga
    14281 ttactgttgt tttagtaact cacgaaatgg atgtggtaaa agacatagct caaaaagctt
    14341 tattacttga acatggacaa atcataggaa gtggagcaat tgatgagctt tttttaaggc
    14401 ctaatgtcaa aatgaaagaa tttttaggag aaagcgactt cttgcctgag cacggactta
    14461 atatcaaact ttactttcca aaagaagttg cccaaaatag cgtcatcact catatggcaa
    14521 gaactctaaa tatagacttt aacatagttt ggggtaaaat agaaaaactg aatggaaaag
    14581 ccttgggaaa tttagttata aatataaatg aaaaggataa agacaaggtt cttgattaca
    14641 tagaaaaaag tggagtatta tgggaggtgg catcatgaat gaagaaaaca tctctattgt
    14701 cagtgctttt tttagtagaa tttctcaatt ttttaatgaa ttttcttggc aggatattaa
    14761 agaagtgagt ttaagttcta tcacgagttt caatgaaaat tatgaaaaca ttttaaaacc
    14821 tgcacttaat gaaacaattt atatgagttt aatggctgta ctatttggat ttttattggc
    14881 tatcattcct ggaattttac ttgctatttg ggataaaaat ggaattaaag aaaataaaat
    14941 cgcttatagt attttagatt ttattaccaa tatattacgc gcctttccat ttttaattct
    15001 tatagttgtt cttttaccac tttctaaaat catagtaggc acaagcatag gtacaaatgc
    15061 tgccatagtt cctttagcta tcggaatagc tccttatttg gcaaagatgc ttgaaagcgc
    15121 ttttaaagaa atagacaaag gaatcataga agcagcaaaa agttatggtg ctagcaatat
    15181 tcaaattatc ttcaaggtta tctttagtga ggcccttcct gctataatta gcggaattac
    15241 cctaactttg atctttacca ttggtttttc tgctcttgct ggaactgtcg gtggtggagg
    15301 tttgggagat gtcgctattc gctatggtta tgaaagattt aacaaagaag ttatgattca
    15361 aactgtagtt attttactta tattagttca gttagttcaa attctaggta atttatttta
    15421 tacttgggct aaaaatagta aaactacata tatcattgcc actctattga ttttacttgg
    15481 agttagtata gttatcaata taaacaatga tgaaaatttc ttttggcaag taattgtttt
    15541 tatcttattt ttaggaagtt tgctttataa aggtttcaaa aaataaggag attatatctc
    15601 cttttaagat aaatataagt ttttttaagt aaaatttaaa caaaaaacta taaggaatta
    15661 aaatgatgta tcagatgcgt taatctgact atcaacaagt ttttatatac ttcttcctga
    15721 tagtcagagt gaatttatta agattaaagc aagcacaaaa tgactaaaaa ggaaaaaaat
    15781 gaaaatcaaa tctttattta tagcaagtat tttaacatta agtcttaatg caaatgcatt
    15841 agaaaccatc acagttgcag caactcccgt ccctcatgct gaaatcctag aacaagtaaa
    15901 acctgattta gaaaaacaag gctataaact tgaaatcaaa gaatttacgg attatgtttt
    15961 acctaatcta gctgttgata acggagaagc cgatgcaaat tttttccaac atactcctta
    16021 tttggaagaa tttaataaaa acaaaggcac caaacttatc aaagtagctg ccatacacat
    16081 agaacctatg gctgtttact ccaaaaaata caaaagtcta gatgatatta aagaagggat
    16141 taaaatcgcc attccaaatg atccaaccaa tgaaagtaga gctttagata ttattgcaaa
    16201 aaaaggtttg gtaaaattta aagataaggc tttaaaaaca cctcttgata ttatagacaa
    16261 tcctaaaaaa attaaatttg tagaattaaa gcccgcacaa cttccaagag ctttggatga
    16321 tgttgatttt gctgtaatta attccaacta cgctctctct gcaaatctaa atcctgcaaa
    16381 agatagcgta tttatcgaag ataaagaaag cccgtatgca aacattcttg ttgtaagagt
    16441 gggacatgaa aacgatccaa aaatcaaagc cttaatccaa gctctacaaa gtgataaaat
    16501 caaacaattt atcatagaaa aatacaacgg atctgtttta cctgcttttt aattttgtcc
    16561 cttacctagg gacttttttc ttaaatacaa aggagttttt atgaatttat ttaaaattat
    16621 tatactcgct tatattctaa atttatctag cctatttgca caaaacatta ctataggagc
    16681 cactccaaat ccttttggta gcttactaga actaatgaaa gatgatttta aaaacaaagg
    16741 gtatgagctt aaaatagtag aattttcaga ctatattttg cccaatcgtg cattagagga
    16801 aaaagaactt gatgcaaatt tatatcaaca caaacctttt ttagaagaat acaacctaaa
    16861 aaaaggttca aatttaattg caacaacgcc tgtacttata gctccagtag gagtttatag
    16921 taaaaaaatc aaaaatttag aaaatcttaa agaaggtgct agagttgcta tacctaatga
    16981 tgcgaccaat gaaagcagag ctttagagct tttagagaaa gcaaaattaa tagagcttaa
    17041 caaaaatact ctaaaaaccc cattggacat aaacaaaaat ccaaaaaaac ttaaatttat
    17101 agaacttaaa gccgcacaac ttccaagagc tttagatgat gttgatattg ctataattaa
    17161 ttctaatttc gcacttggag ccggtctgaa tccaagtaaa gatactattt ttagggaaga
    17221 taaaaatagc ccttatgtaa attatgttgt ggtacactca gaagataaaa atagcgaaaa
    17281 aaccaaagta attgatgaaa ttttaagaag cgataaattt aaagccatca ttaatgaaca
    17341 ttataaagat atattaatcc cagcttttta ggagtataat atgaatatta aaaaaatatt
    17401 tttaagtgtt ttatttacaa ttagccttag ttttggggcg gataaaacca taatcatagg
    17461 tgcaacacca acgccttatg ctgaaatttt aaatttctct aaacccttat ttcaagaaaa
    17521 aggttggaag ttaatagtta aggaatttaa tgactataat atacctaaca tcgctttaaa
    17581 tgaaaaagat ttagatgcaa atttatatca gcataaacct tttttagatg attttaatac
    17641 ccacaaagga acaaaattaa gttctttagg tgctattgtt ttagttccta tggctatata
    17701 ttctaactcc ataaaagata taaaagacat tcctaatggt gctaaaatcg ctatacctaa
    17761 tgatgctacc aatgaaagca gagctcttga tttactagct aaagcaaatt taatagagtt
    17821 taaaagtcaa agcaccctta aaacccctat tgacataagt aaaaatccaa aaaaacttaa
    17881 atttatagag cttaaagccg cacaacttcc aagagcccta aatgatactg atttggctat
    17941 tattaccaca aactatgctc ttggagcagg cttaaaccct ttaaaagatg gtatttttat
    18001 ggaagataaa gatagtttat atgctattgt tttagctaca agaaaaggtg aagaaacaag
    18061 tcaaaaaagt cttgttatta aagaaatttt aacaagcgat aaaattaaaa attttatcat
    18121 agaaaaatac aaaggctctg ttatccctac tttttaactc tatacaaagc cttctaaagg
    18181 ctttgttaaa cttataaaag ctaaaatatt ataattctta ggataaaaat gaaaattatt
    18241 tttttaactt tttttattgt gataaattat atccaagcag ctagtttaga agaaatcaaa
    18301 acagcactag ctaaagaatt tagaaataat tttcctaaaa ttataatttc tcaaattgat
    18361 ttaaaaataa catcattgcc taaagatttt gatcaatatg aatttctaag aatcgctaat
    18421 gggcgtttta atcaagcaca aggcttttta agggctgaat ttaaaactcc gcaaaatata
    18481 caaaaaaatg tattttttag atatttcatt caagcaaatt tagaagtttt aaaaagcgaa
    18541 cgcgctataa aaagaggaga taaacttgga gcttttgact ataaaagcgt attgattgat
    18601 tttgataaag ttcctttaaa tgccttaacc ttagatgatg tagataatct tgtagctaaa
    18661 agcaatatta acaaaaacgc cattttaaga gcaaatatgt ttaaaaccac agctttaata
    18721 cgccgaaatg atcctataat cgggatttta agcgaagcaa atgttgatgt tttaatcgaa
    18781 cttgtggctt tgcaaagtgc aaatatgggc gaaaggattc gtgcaaaaaa caaagaaggt
    18841 aaagttatgc aaggcatcgt agtgggtaaa aataggatga ttatacaatg aaggttttat
    18901 taggaatttc tggttcaagc agtgtcaatt taggcttaaa attattaaaa aatctagaaa
    18961 accaatgcga actttattgc attttaaccc aaggtgcaaa acttagcttc aaaactgaaa
    19021 atcaagcaaa tttagaagaa atttgtcaag aaaattttaa atacacttat tttttagatg
    19081 ataaaaattt aagtctaagt gtagcaagtg gatcttttgg aatagaaaaa accatcattg
    19141 ctccttgttc aatttcaagt ttagcaaaaa ttcacgctgg ttttgcagac actcttttaa
    19201 tgcgtgctgc agcagtggcc ttaaaagaaa gaaaaaaact tatcttaggc gtacgcgaaa
    19261 tgcctttttc tactttaaat ttagaacata tgttaaaact tagccaaatg ggagttatta
    19321 tcgcccctcc tattatcgca agctattcta aagcaaacaa tctagagcaa atggaaaatt
    19381 ttatcgcagg taaatggtta gatcttttag aaataaaaca caatttatat gaaaaatggc
    19441 aaaattttta gtttaaattt gttatatttt taaaaaaaat tggagcaaaa atgacttgtt
    19501 tatatcctgg gacttttgat cctattacca acgggcattt agatgttata aaacgggctt
    19561 taaaaatttt tgatgaagtc atcgttgcca tagcaaaaag tgaacataaa aaaccttgct
    19621 atgatttaga aaaacgcaaa gaactagccc tgctcgcaac acaaaattta aaaaatgtta
    19681 aaatcattgc ttttgataat ttacttgtag atttagccaa agaattaaaa gttaatacta
    19741 taatccgtgg acttagagca gtgagtgatt ttgaatacga attgcaaatt ggctatgcaa
    19801 atcacgcact ttgggaagat atggaaacca tttatcttat gccaagtcta aaacatgctt
    19861 ttatttcaag ttctattgtg cgttctatag tagcacatgg gggtgatgta agttctcttg
    19921 ttccaaaaga aattctacct tttttaaagg atcaatcttg tatgtagttt ttgaaggtat
    19981 tgactgcgta ggaaaaagta cgcaaatttc acttttaaaa gaaatttaca aagatgccat
    20041 tttcacactc gaacctggcg gaacagaact tggaaaacat ttaagagaaa ttttacttaa
    20101 taaaactcat cctattaaca aaagagctga actcttgctt tttttagctg atcgtgctca
    20161 acattttgaa gaaatcttaa aaaccaatca aaacaaactc attattagcg atagaagttt
    20221 tatttcaggc atggcttatg ccaaagattt tgaaaacgat tttctttttg ctttaaatag
    20281 ttttgcttta gaaaattttt ttccacaaaa aattatcttt ttaaaaggag atgcaaacct
    20341 tatccaagaa cgcctcagtc aaaaagaact agatagtata gaaaaacgtg gcattgagta
    20401 ttttttaagt gtacaggaca aactcgaaaa agtgcttcat tttttaaaag aaaaaatttc
    20461 tgtagaaatt ttaacacttg acgcaaaaga aagtaaagaa aaattacacc aacaaataaa
    20521 ggaattttta caatgattaa cgctttaaaa ggaatgaaag atttattaga taaagatgca
    20581 tattattatg aaaaagtgat taaaacctgc gaaaaagtag ctaaaaacta tggctttact
    20641 tttatcaata caccgcattt agaactttgc acccttttta aaagaagcgt aggagaaagt
    20701 tctgatatag taggtaaaga aatgtatgaa tttatcgata aaggtgaaaa tcatgtttgc
    20761 atgcgtcctg aaggaactgc tggggtggtg cgtgcctata tagaaaaaaa actcgataaa
    20821 aacactagtg tgaaaagatg gttttatcat ggttctatgt ttcgttatga aagacctcaa
    20881 aagggtcgct taagagaatt tcatcaattt ggagttgaaa gccttggcat acctaatgtt
    20941 tatgaagatg caagcattat tttaatgcta gtagaaattt tctcacgcct tggtattgat
    21001 tttaaacttc aacttaattc tttaggctgc tcacaatgct tgccaaaata ccgcgatagg
    21061 ctcgttgaat tcttagattc caaagaaggt ttttgtgaag attgtttgcg tagaaaaaat
    21121 ttaaatccta ttcgtgtctt agattgtaaa aatgagcatt gtcaaaattt gcttgaaaat
    21181 gctccgcttt tgatcaataa tttatgcacc tcttgccaaa aagactttga aacactgcaa
    21241 caaattttaa aggataatgg agttaaattt gagttagatt caaaacttgt gaggggtttg
    21301 gattattatt ctaaaacggc ttttgaattt ataagcgatg aaataggagc aaaggctgct
    21361 atcgcaggtg gaggacgcta cgatagactt atagagtatt taggtggaaa aagtggctat
    21421 ggtataggtt ttgccatggg tatagaaaga attataacta ttttagaaca aaaagaagaa
    21481 aagattcaaa gagaaggaat ttatctttgt gctatggatg aaatttatat ccaaaaactt
    21541 ttgcatatcg ctacaaattt aagaaaagaa tataaagtac ttttaagcta tgaagcaaga
    21601 aaactagcca aacatcttga aaacgcggat aaaaataata ctgaaatttt tctttgcatg
    21661 ggagaaaatg aagcacaaaa tgaaagtttg ttttataaaa atttagcaaa aaaagaagaa
    21721 aaaatgatta aaatttcaga cttaaagaag gttttatgat ggattatggt attgatattt
    21781 ggggaaatga aaatttcatt atcaaaaatg gtaaagtttg tatcaattac gagaaaaaac
    21841 ctgctattat tgatatagtt aaagaattaa gagatgatgg atacaagggg cctttacttt
    21901 taagatttcc tcatcttatc caaaaacaaa ttgaaaatat ttacggaaat ttcaataaag
    21961 caagaaagga atttggctat aaaggaggat ttaacgctgt ttatccttta aaggtcaatc
    22021 aataccctgg ttttgtaaaa aatcttgtaa aacttggaaa agactataac tatggacttg
    22081 aagcaggttc taaggcagag cttttactcg ctatggctta taataacgaa ggcgcaccta
    22141 ttaccgtaaa tggctttaaa gatagagaac ttatcaacat aggctttatc gcagctgaaa
    22201 tgggacataa tatcacttta accatagaag gacttaatga acttgaagct atcatagaca
    22261 tagctaaaga acgctttaaa cctaaaccaa atataggctt acgcgtgcgt ttgcattctg
    22321 ctggagttgg aatttgggca aaaagtggtg ggattaattc taaatttgga cttacatcca
    22381 ctgaactcat agaagcggta aatttactca aagaaaacaa acttttagaa caatttacca
    22441 tgattcactt tcatctaggc tcacaaatta ccgaaattca ccccttgaaa aaagccttaa
    22501 atgaagcagg aaatatctat acagaactta gaaaaatggg agctaaaaat ctaaaagcta
    22561 tcaatcttgg tggcggttta gctgtggaat actcacaatt taaaaatgaa aaaagtagaa
    22621 attacaccct aagagaatac gctaacgatg tagtttttat cctaaaaaac atagccgaac
    22681 aaaaaaaaga tttagagcct gatattttca tagaaagtgg acgttttgta gcagctaatc
    22741 acgctgtttt aatcgctcct gtattagaac ttttttctca agaatacgca gaaaacaaac
    22801 tcatacttaa aaaacaaaat ccaaaactta tcgatgagct ttatgatctt tataaaagta
    22861 taaaaccttc caatgcttta gaatacttgc acgatagcat agatcattta gagagtattt
    22921 taactctttt tgatttgggc tatgtggatt tacaagatcg ttccaatgct gaaattttaa
    22981 ctcatttgat tacaaaaaaa gccatcttgc ttttaggcga taagcaaaat cctgcggatt
    23041 tacttgccat acaagatgaa gtgcaagaaa ggtatttggt aaatttttcg ctctttcaaa
    23101 gcatgcctga tttttggggt ttagaacaga atttccccat catgccactt gatcgcttag
    23161 atgaagaacc gacacgaagt gcaagtattt gggatataac ctgtgatagc gatggagaaa
    23221 tttcatactc taaagataaa cctttatttt tgcacgatgt agatgtagaa aaagaaaatt
    23281 attttctagg gttttttctt gtaggtgcct atcaagaagt acttggaatg aaacacaatc
    23341 tttttactca tcctactgaa gctattataa gcatcaatga aaaaggctat gaagtcgagg
    23401 ggattataga agcgcaatcc atacttgata ccttagaaga tttagactat gatatacacg
    23461 ctatcatgga tatacttaat gaacgcataa gtaattctaa gcttgtaaat gataagcaaa
    23521 aaaagcatat tttaggcgaa ctttatcttt tcttaaatga taatggttat ttaaaaagca
    23581 taggagttta gatgaatttt tggggtatta taaaagaaga tttttctcag ccaaaggcac
    23641 aagatccagc ttttaattct tgtatagaac ttttttttaa ttaccctgga gtatgggctg
    23701 tagtaaatta ccgctttgca catttttttt acataagaaa ttttaaacgc attgctagaa
    23761 tgattagcgg aatttcacaa ttcttaactg gggtagattt gcaccctgga gcagaacttg
    23821 gaaggcgtat ttttatagat catgccaatg gagtggttat aggtcaaaca gcaattatag
    23881 aagatgatgt tttaatttat caaggcgtta ctttaggtgg aacaagcctt gaaaaaggta
    23941 ctaaacgcca tccaaccata aaaaaaggag tgatcatagg ctcaggcgca aaagtacttg
    24001 gcaatatcac cataggagaa aatgccaaaa taggctcaaa tgctgtagtg gttaaagatg
    24061 taggtgcaaa tttaactgcc gttggaattc ctgcttatat tatcgaagag cgtaaaaata
    24121 aaaacattag agctatagat gcaaattgcg atgacaaact agaaaagtta gaaaagaaaa
    24181 ttttagaact tgaaaatctt atattaaaac aacctgaatc acaaaaataa taattt
//
LOCUS       DARATF010000013        23986 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.013, whole genome shotgun sequence.
ACCESSION   DARATF010000013 DARATF010000000
VERSION     DARATF010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23986
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.013"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            233..496
                     /locus_tag="SB502_000408"
     CDS             233..496
                     /locus_tag="SB502_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014769654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433891.1"
                     /translation="MLLEGFSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQ
                     IYYLSREIATLRTEESVLNEENKDLKRRLENMRFQNQILDYLE"
     gene            complement(484..975)
                     /locus_tag="SB502_000409"
     CDS             complement(484..975)
                     /locus_tag="SB502_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433892.1"
                     /translation="MKKFKEFSLRFLFKVSEQPVLIRDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGVFCAVILLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYIRKIISKKIIQKAWALHFPYFAYEKYSTMAGEFYKEALKEEIPKANLEQYVLDKII
                     HSK"
     gene            1124..4877
                     /locus_tag="SB502_000410"
                     /pseudo
     CDS             1124..4877
                     /locus_tag="SB502_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
     gene            complement(4905..6095)
                     /locus_tag="SB502_000411"
     CDS             complement(4905..6095)
                     /locus_tag="SB502_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEG0433893.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKIVKASGLVEKIGEQNSKVVLKNT
                     LNNESFERELTINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHCTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAYVSSRAAKFLQKDQNELNVISAHLGNGASVCAIEKG
                     KSMDTSMGFTPLEGLIMGTRCGDLDPAILPFVSHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFKLNKQRILGERMINHANSKVKVLVIPTDEELEIARITEEL
                     IGKN"
     gene            complement(6109..7614)
                     /gene="pta"
                     /locus_tag="SB502_000412"
     CDS             complement(6109..7614)
                     /gene="pta"
                     /locus_tag="SB502_000412"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEG0433894.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLKEYDFITPHRFKYELIKQSIKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDSAKLSLDLNTIRIINPLKSEYNQEFASILYEARKSKGMSLEEA
                     RKLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPSAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            7704..8402
                     /gene="flgH"
                     /locus_tag="SB502_000413"
     CDS             7704..8402
                     /gene="flgH"
                     /locus_tag="SB502_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEG0433895.1"
                     /translation="MKKVLFYVLPFVFFGCSATVDPQISMKPPAYVEELAPKQSNNIE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            complement(8432..9505)
                     /gene="ispG"
                     /locus_tag="SB502_000414"
                     /gene_synonym="gcpE"
     CDS             complement(8432..9505)
                     /gene="ispG"
                     /locus_tag="SB502_000414"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEG0433896.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENIKEVVKACKKRGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDEVKSRAVKE"
     gene            9651..11046
                     /locus_tag="SB502_000415"
                     /pseudo
     CDS             9651..11046
                     /locus_tag="SB502_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109180.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
     gene            complement(11056..12909)
                     /locus_tag="SB502_000416"
     CDS             complement(11056..12909)
                     /locus_tag="SB502_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEG0433897.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKN
                     LKAIVLKECQKPDFKTVEIKEITGYFLTPLQFELANFIVYYYASKLGFVLGFFETSPK
                     YECHKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMQKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIQVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFR
                     QIICKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNTILKNFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IENYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKSAQKLCEKFASQFRNIKQVELV
                     GYGICGVEMLYGKYRFYLLLRSENHKALVAIENYILQFKNASADIDPIDFV"
     gene            complement(12891..13328)
                     /locus_tag="SB502_000417"
     CDS             complement(12891..13328)
                     /locus_tag="SB502_000417"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEG0433898.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            complement(13325..13567)
                     /locus_tag="SB502_000418"
     CDS             complement(13325..13567)
                     /locus_tag="SB502_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433899.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            complement(13557..13787)
                     /locus_tag="SB502_000419"
     CDS             complement(13557..13787)
                     /locus_tag="SB502_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433900.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            13942..15915
                     /gene="uvrB"
                     /locus_tag="SB502_000420"
     CDS             13942..15915
                     /gene="uvrB"
                     /locus_tag="SB502_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEG0433901.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSATSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQMAYNKKHNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPANERAKL
                     VKELRKQMLEAAKALEFEKAAAIRDEINKLRDL"
     gene            complement(15910..17838)
                     /locus_tag="SB502_000421"
                     /pseudo
     CDS             complement(15910..17838)
                     /locus_tag="SB502_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856839.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
     gene            complement(17841..18449)
                     /gene="kdpC"
                     /locus_tag="SB502_000422"
     CDS             complement(17841..18449)
                     /gene="kdpC"
                     /locus_tag="SB502_000422"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HEG0433902.1"
                     /translation="MFRTLLSFFVVMLILCTLVYPFALNTVAKFIFPYQSSGSLVDKE
                     GRPTLDVSKAVGSKLLGQDFNKPYFLHSRTSVSNYNTSDTNESSVSLGGFNYAMSNPA
                     LKERVQKDLQKFLDENPQITKEQIPLDLLSASGSGLDPHISLQAALVQIPRISQSSKI
                     TKEELEKIIQENTESKFLGIFGEEKVNVLAVNIAIAKAMKKE"
     gene            complement(18451..20510)
                     /gene="kdpB"
                     /locus_tag="SB502_000423"
                     /pseudo
     CDS             complement(18451..20510)
                     /gene="kdpB"
                     /locus_tag="SB502_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
     gene            complement(20520..22209)
                     /gene="kdpA"
                     /locus_tag="SB502_000424"
                     /pseudo
     CDS             complement(20520..22209)
                     /gene="kdpA"
                     /locus_tag="SB502_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
     gene            complement(22219..22400)
                     /gene="kdpF"
                     /locus_tag="SB502_000425"
                     /pseudo
     CDS             complement(22219..22400)
                     /gene="kdpF"
                     /locus_tag="SB502_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344095.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
     gene            complement(22542..23966)
                     /locus_tag="SB502_000426"
     CDS             complement(22542..23966)
                     /locus_tag="SB502_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEG0433903.1"
                     /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCVGIFSWFRGKDLDKDEVFQ
                     EKLKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIVLVALLGVFDFLRPNWGQV
                     VKNGIPQVDALGNPKMDVLSMVSVIQMFMLLAGSLIVIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAVLGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMVAGYL"
BASE COUNT         8845 a         4060 c         3142 g         7939 t
ORIGIN      
        1 aaaggaactt acaaattcta tagaaaaaat tcaaaaaaca gaaactaaaa tacaaaaacc
       61 tctaattata gaaaaaaaac tagatgttaa aaatcaacct aatatcaaga aaagtttaga
      121 aaatttacaa aaaaaaataa caccacaaga aaataaacaa gaacttccaa aaccatctaa
      181 tcaagctcaa aaaaaacaac aaaatgatga agatgctcaa aaggcaaaaa atattttact
      241 agaaggcttc tctaatgcta ccaaagaaga tagaaaccta aacttcaatc atcttctttt
      301 tgcagcttta cttgttagtt ttgcattatt tttatttgcc ccacaaattt atattagaaa
      361 tcaaatttat tatcttagta gagagattgc tacattaaga acagaagaaa gtgttttaaa
      421 cgaggaaaat aaagacttaa aaagaagact tgaaaatatg cgattccaaa atcaaatttt
      481 agattattta gaatgaataa tcttatctaa aacatactgc tctaaatttg cttttggaat
      541 ttcttctttt aaagcttctt tataaaattc acccgccatt gtagagtact tttcataagc
      601 aaaataagga aagtgtaaag cccaggcttt ttgtattatt ttttttgaga ttattttgcg
      661 aatataaact ttaaaaatat catatcctat aaatacacaa gcagtaacca taacagcgct
      721 cactatgctt atatgaaagt caagctttgt taaaaaataa tgagtaatca aaagcaatgg
      781 caataaaatc acagcgcaaa aaacaccaaa ataaatataa gaatttagaa ttttgaaatt
      841 aaaatttagc ttagaaggat ctacaagcat tccatcgtta aaaagtgcat ttgcctctaa
      901 taaatctctt ataagaacag gttgctctga tactttaaat aaaaaacgaa ggctaaattc
      961 tttaaatttt ttcataatcc acgctttatt ttttaattaa aattttatcc aaagaaaatt
     1021 aattccaact aaaaaatcat tttcataaat aagcacaagt ctttaaattt tttagatata
     1081 atttaaaatg tcaaattttt aaaaatactt tagaaagaaa gccatgaatt actatcaaga
     1141 acttaaaaaa tacctcaaca ataatctttt tacaagctat tctttagaaa ttgactttcc
     1201 taagatttat aatttcaacg caaatcaaaa agcctttaga gatattttaa ctaaaattac
     1261 aaaaatttac gacaaaaaca aatttataaa acaaaacgaa catcaatttg aagatgaatt
     1321 tatatcaaaa gtattagaaa ttttagagtg gtgctttgta agacaagatg aaaaaatcat
     1381 acaaggaaaa ttggaaaaac ctgattttct actttttagc aatgaaaaat taaaaacaaa
     1441 atacgaaaat ttagacaaag aaacaaaaaa atcaagcaat gatttcacaa tcattttaga
     1501 gtcaaaagct tataatatag aaatagacaa taaaaaaagt aaaagacaac cctcactttc
     1561 aaattctaag atatctaggc aatcttaaga aaaattatgg ttttttaacc aatggtagat
     1621 tttggcgttt ttatgataat tctatactga attcaaacaa agttttttac gaaatcaatc
     1681 tagaaaaaat cattgaagat caaaatattg aagcttttgc gtatttttat agtgtattta
     1741 gcgcttttaa tttcacagaa aaagaagatc atttagaaat aactctacaa aacaataaac
     1801 tttcaaaaat caaaatagaa gatgatttaa aatctatcat ttacggaacc aatggaaatg
     1861 aatctttatt tgaattcata ggctctagaa tttacaataa aacaaaggcg gatttaaaac
     1921 taatctatga aaattcttta tattttatct ttaggctttt atttattgct tattttgaag
     1981 ataaatttga aattatactg gaaaaacata agtattttaa aagtaaaatc agtcttagaa
     2041 ccttacttga aaatttacaa gaagatgaaa gctcaagtgg tggctttgga gaacttgaaa
     2101 atattttcaa catttacaac aaaggcaaag gcaattttga catgcctgtt tttaatggcg
     2161 gtttgtttga tgaaagcaaa accgctcttt taagcacgcc aaaaatcttt aacgataaag
     2221 atttaaaatt cattttaaac caattattaa attttaaaga taaaaatcta agctttaaaa
     2281 gagattacaa aactttaagt gtagaacatt taggcacgat ttatgaaggc ttgctttctt
     2341 atttttttga aatagcaaat gaagatattt actatgtaag ttataaagaa aaatcaaaag
     2401 aaatagaatg ttattttgat aattatgatt ttaaaatttt agaaaaatca aaaaaagtag
     2461 aaaaatacac cttttacaaa aaaggacaaa tttaccttaa aaatactagc aactcaagaa
     2521 aagcaagcgc aagcttttac acacctcaat ccatagctaa ttttttaatc caaagtgctt
     2581 taaaagacaa actaaacaat gaaaatattt tgaaatttaa aatactagac aatgcttgcg
     2641 gtagtggaca ttttttagtt ggagttttaa atgctattac acacattgtt ttatcagatt
     2701 ttgatcattt tacaaattta aaagaacttt acgaagaaga aaaagaaaat attttaaact
     2761 atataaaaga ttttgtgcaa gactatgaag tagatgagag tgatatttta aaacgacttt
     2821 tactaaaacg cattatttat ggggtggatt taaacccttt tagcatagag cttactaaac
     2881 ttagcctttg gatagatagt tttatcttta caaccccact ttcttttata gaacaccaca
     2941 taaagtgcgg caatgctttg ataaattcta atctaagtga ttttaaagat ttgataaaac
     3001 aaaactcaag caaccttttt acaaattcca taacacaaga atttgaaatt ttacaagaag
     3061 tatttgaaaa acttgacaac ctaaaagata ccaacgaaga acaaatcaaa caatccaaac
     3121 aaatctatca aaatgaaatc acaccaaaac ttaataaact aaatttatat ctaaactata
     3181 tcaacacgct tcattttgtc aacaaagaag aattacaaat tctaaaagcc ctaagtcaag
     3241 atgatataca aaatttaagc caaaatgaac aagcaaaagc tatcattagc aaatatcaaa
     3301 aagaatttaa cttctttaac tatgagttag aatttcctga aatcacagaa aatcaagtct
     3361 ttaaaggctt tgatatcatt ataggtaatc caccttggga taaaactaaa tttagtgata
     3421 gcgatttctt tccacaatac aaaagcgatt atagaagctt aatcgctagc aagaaaaaag
     3481 aaattcaaga caatttgcta gcaaaagatt atataaagca aaattacgaa aaacaaaaag
     3541 catatataaa tgatttaaac gagtattata aaaaaaccta tcctttaaac aaaggcagtg
     3601 gagatggaaa tttatttcgt ctttttgtag aaaaaaatct ttctctttta aaacaagatg
     3661 gaaatttagc ttatgtactt cctagtgctt tgatgtttga agatggaagc ttaactttaa
     3721 gaaaagaaat tttagaaaat aaaactttag agtattttta tagttttgaa aatagacaag
     3781 ctatatttgc tgatgtggat tcaaggtata aatttgctct tatgcttata aaaaacacgc
     3841 aagcaaatca cactcataaa atcaaaatga tgttttataa aacagatata aactcattaa
     3901 aaaacaaaga tgaaatttta actctaaatt taaaagatat caaaaagcta agcccaactc
     3961 acctagcctt aatgaagtta aaagacaaac aagctttaga aattctaaga aaatcttata
     4021 atgcttttca aaacttgtct tttgattata tagattttag aagagaactt gatatgacaa
     4081 acgataaaga tttgtttata gaagagttta gggaaggact tttaccctta tatgaaggta
     4141 aaatgataca tcaatttgat gcaaatttta gccaagctac ttatttttta gaaaaggcta
     4201 aatttgatga gcgtttaaaa agtaaagaac tttatagagc taaaaaagct actgggaaag
     4261 aattaaatcc taaattaata aaatacgata gagaattttt tagactcgga tatagaaaaa
     4321 ttgcaagtga tacaaatgag agaactttga tagcttcttt attgccaaaa aattgcggtg
     4381 gagctgatag tacttatagt aacattccaa aacaatatgt tttaaaagat gatgtaattt
     4441 gcatggatat agtgccttat gaaagaattt tatttgtttt agctttgttt aattctttag
     4501 tggttgattt tatcataaga aatatggtgc aaatcaatgt aagcaaatct tatttagaaa
     4561 gaattcccct gcctcaacca agtgatgaag aaattcaaaa caatgaaatt tataaaaccc
     4621 tcgctaaaaa tgctttgctt ttacagcttt acaatgatca aaatcgtcat tttgatgagc
     4681 taaaacaaga atttaatata aaaaatgaag aaattccaaa aactaaaaag gcttatgata
     4741 tcttaagagc aaaaaatgat ttattggtta aagaacttta tggtttaagt gatgatgaat
     4801 tttcttacat gataagcact tttaaagttt taaatgaaaa gcaaagtgaa tatataacct
     4861 tgctaaaaac tatataaatg aaagatttat atagttttta aaatttaatt tttaccgata
     4921 agttcttctg taattctagc gatttctaat tcttcatctg taggaataac aagcacttta
     4981 actttagaat ttgcatgatt tatcattctt tcgcccaaaa tcctttgttt gttaagttta
     5041 aaatctaact cgataccaag atgagctaat ctctcgcata ctttttgtcg aaccaaacta
     5101 tcattttctc ctataccacc tgtaaaaata atagcatcgg tttttggcaa cacagcaaag
     5161 taggatccta tatatttaac aagacgataa caaaacatat caagagccaa gcgtgcttta
     5221 tcattacctt gttctatctc tctttctata tctctaaaat cattataacc gcaaattcca
     5281 tatactccac tttttttatt catcagtgta tctatttctt ctatagttaa acccttaaga
     5341 tgactaacaa aaggtaaaat agcagggtct aaatctccac aacgcgttcc cataataagt
     5401 ccttcaagtg gagtaaagcc catagaagta tccatactct tacctttttc tatagcacat
     5461 acacttgcac catttccaag atgagcagag atgacattta attcattttg atctttttga
     5521 agaaattttg ccgctctaga actaacataa gcatgagaag tcccatgaaa accatatctt
     5581 ctaatattat gcttatcata aaaatcataa ggcaaagcat acatataagc aaaatcaggc
     5641 atagtgcaat gaaaagctgt atcaaaaata gctgcattag caacactagg tgcagctttg
     5701 atcattgttt ttatacctgc taaatgcgca ggattatgca aaggagcaaa aatactaacc
     5761 ctatctatct ctttaagaac ataatcatcc actaaacaat gctcgcttaa atttcttcct
     5821 ccatgaacta tacgatgacc gcagccatca agtgcattta aatctgctaa aattcctgat
     5881 tctttaaaaa gctcattaac tatactaagg ccttcttcgt gattatttat tgttaattct
     5941 ctttcaaaac tttcattatt taaagtattt tttaatacaa cctttgaatt ttgctctcca
     6001 attttttcta ccaatccact ggctttaacg attttattat caaaaaattt aaatttaatc
     6061 gatgaagaac ctgaatttaa aaccaaaatt ttcatttatc attcctttct attgagcttg
     6121 tattgcactt aaaattacgg tatctacaat atcatctacc aaacatccac gacttaaatc
     6181 attaacaggt tttttaagac cttgcaaaat aggaccgatt gctaaagcat tagcagttct
     6241 ttgaactgct ttgtaacaaa tatttgctgc gttaagatca ggaaaaatat acacatttgc
     6301 atgacctgct atcttagaat ttggcatttt ctttgctgca gtttttggat cataagcgca
     6361 gtcaaactgc ataggaccat ctatattcaa ctcaggatat ttttctttag caatctttaa
     6421 tgcttctttt acaagatcta cgctttctcc tttaccgcta tcaccactag aataagaaag
     6481 caaagctatt cttggttcaa gtccaaaaga tttagcagtc atagcactta cataggcact
     6541 agttgcaagt tgctcagcac ttgggcttgg atttacagca caatcagcaa aagctaaaac
     6601 ttgatcttca agtcccataa agaaaattcc tgaaacggaa ctaatacctt ctttagtttt
     6661 aataagctgt aatgcagggc gaatcgtttc agccgtagta gttgatgctc cactaaccat
     6721 agcatcagct tttccagtgt gtataagtaa agttccaaaa taagttttat cttgaactag
     6781 cttcctagcc tcttctaaac tcataccttt agattttctt gcttcataaa gaatagaagc
     6841 aaattcttga ttatattctg atttgagtgg atttataatc cgtatagtat ttaaatcaag
     6901 acttaattta gcactatctt gcttgatttt ttcttcatca cccaataaaa taagatcaac
     6961 aactttactt ttcaataaaa tttcagcagc ttttaaaatt ctctcatcat tactttctgg
     7021 caaaacaacg gtttttttat tttttatact ttgtttaatc aattcatatt taaaacgatg
     7081 aggagttata aaatcatatt ctttaagttt ttgcacttct tcaaaattaa aattttcatt
     7141 aatcaaaaca taattacgac catctagagc atgatcgaaa tatttttgag ctataagttt
     7201 atcttcatca ttgataatag cagcaatagg tgtattaaga tttttagcta attttatact
     7261 aagatcaaat ccatcaagta ttccaaattc gcaaaaacta tttacaagca caaaatcgta
     7321 tttgcgtttt aactcttcgt attcttctaa aataacatta aaaaaattat gaggatcttt
     7381 gctaaattct tccattgcct ctctaaaggt aaaaccatag gcgcttttta cggtttgatt
     7441 gatattaaat tcttccaacc aaccctgcaa aacaggaacg cgatgtatgt atatcacagg
     7501 gcaataaatt gcgatatttt tgtaaatttt gctataattt ttaagcaaat ttgtactaat
     7561 aatagtattt aactcatcac ttctagatct catcaaataa agatttgcca tcattttctc
     7621 cttgaattta taaatgtgga acactctttg ctttttctaa ttttaacaaa gaaaaataaa
     7681 aattcatatt ttaaaggacg aaaatgaaaa aagttttatt ttatgtgtta ccgtttgtgt
     7741 tttttggttg ttctgcaacg gttgatccgc aaatttcaat gaaaccacct gcttatgtag
     7801 aagaacttgc accaaaacaa agtaataata tagaaagtgc gccaggatcg ctttttggca
     7861 aaggagataa tcctttattt tcagataaaa aagctatgaa tgtaaatgat ttagttacag
     7921 ttgttataca agaaagtacc actcaaagca cacaagctaa taaagcaaca agcagaacta
     7981 atacctcaaa tttaggcgga ggtgctttaa caggaagttc aggagtggta gctaatgctc
     8041 ttaataaagt caatgcttat tctaatatag gctttcaaac caatagttca aacaactaca
     8101 caggaacagg ctcgcaaagc agaaatgaaa gtttcaatac tacaatttca acacgtgtaa
     8161 ttaaaatttt atcaaatggt aattatttta tcgaaggttc aagagagctt ttaatcaacg
     8221 gagagaagca aatcatacaa ttaagcggtg ttattcgtcc ttatgacatc ggtcaagaca
     8281 atactataga tagtaaatat atagcagatg ctaaaattct ttataaaaca gaaggtgaag
     8341 tggatagaag cacaagaaaa ccttggggta gcaaagttat agaagcgata tggccattct
     8401 aaaagcaagg ttaaaccttg cttcttggct tttattcttt tacagcccta cttttaacct
     8461 catcttcaac ttcagctaaa aatctatcta caagttcact ttctttcagt ttagctacaa
     8521 cttcaccatg tcttataaca agtccttgat ttttcccaaa ggctatagcc acatcagcgc
     8581 ccttagcttc acctaaagca tttaccacgc aacccatgac actgatattt aaaggttctt
     8641 ttatatgctt agttttttcc tctacgattt taatcgcact taacaaatca ctttgaatcc
     8701 taccgcaagt tggacaagag atgatattta ctccgctttt ttgcactccg ctatcttgta
     8761 aaatcgccct tgctacacga atttcttctt caagctcacc cgtcatagaa acacgcatag
     8821 tatcgcctat acctttaaga agtaaatttc ctaaagctat agaacttttt acagtgctat
     8881 gaaatttagt tcctgcttca gttaccccta agtgaaaagg ataatcacaa agcggtctta
     8941 atctctcata agcttctata gttttttgag catctgaagt cttcatggaa attttaatat
     9001 caaaaaagtc taaatcctct aaaagcttga tattatacat cgcactttct agcatggcat
     9061 cgacaccata accaaattta tcactaaatt gtttttctat ggagccgtga tttacaccga
     9121 tgcgtatagg gataccccgt tttttacatg cttttaccac ttctttaata ttttctttag
     9181 agcctatatt gccaggattt atacgcacgc catcgataaa ttcagcacaa tatacagcca
     9241 aattatgatt aaaatgaata tctacgatta aaggtagagg acttttagct ttaatctctt
     9301 ttaaagccct tgcatcagcc atatccaagc acgccaaacg cactatattt gctcctgcaa
     9361 aataaagacg attgatttgt tctaaagaac cttctatatc tcttgtttta gtaaaaagca
     9421 tagattgaac tgaaatgggt gcatcaccgc ctattaaaac atttcctact ttgatttgtc
     9481 tggttttaaa tcttttatac tccataactt cactctttga aaaattttaa tatcaaattt
     9541 taacttttta ttgctttaat taaagtttat ttttgataat atatttaaat ttcatgacat
     9601 ttaaatattt atgaattata tataaattaa atacaattaa aagaggttat atgcaaaatc
     9661 ttttactcta tataaaaaat aacctaactc caaccctagc tcaaattctt ttacaagctt
     9721 taaaaaattc gaataatgaa aaattttttt acctttgttt tggaaaatat tgaaacaatt
     9781 tgcacttggc tcaattctaa cgaatttagg gatagatatt tatcaacaaa acatccttat
     9841 ccacctttaa tcaatcctaa ttttatagaa atagattcta gtcgacattg cgcagaatta
     9901 gcttgggatt taaatttacc cctgcctaaa cactataaat ttatctatat ttctccacat
     9961 ggcgttggag cagcagcatt tttagatacc ttaatcaatg ttgcgatgta acttgttttg
    10021 cctcctgggt tttaccacct gatagcaaag agagatattg tattaattac atgtgtctaa
    10081 atgataatac aattgctcaa tatgctatta atatatcaga aattaatcta ccttattttg
    10141 ataaatatct atctttatta gattttaatt ctaagattat ttgcggagtt cgagatccaa
    10201 tgggactttt aaagcatagc tggggaagag attggagtaa agttttaaga aactatcccc
    10261 ctgaatttaa tctaacttat gattggcgtt attatattga ctatcttact catcaaaatc
    10321 ataaaattaa aatcgatata aacgaactac aacaaggagt ttttatcatc tcttatttat
    10381 taaaatattt taacaaagac aatgtatgct atcttgatat ggaagaaatc cgccaatcaa
    10441 agaccttcga taccatgaat ttacttgcta taaattttaa ttttaccccc ccccataaag
    10501 ataaattaga tttatttaaa attaaagaat ttagaggtta tattcgctat ctttttccta
    10561 tcacgctcta tgcaaattct aaagatatta ataaacacct tttatcttaa tactcctaaa
    10621 aataataaaa attttaatat tgataaaact tctagcattc ccataatttt agacagaaaa
    10681 catatcaatc atgaaaaaat agacataata caagaaatta taaaaaacga cctatgtaat
    10741 gatatgggtg tatatattga caaaaatgat tttaaacaat tggaacaaaa caatctttta
    10801 ttttcaacaa ttaaacatta tttgtatgat tttttatatc aaattaaaat aactatagat
    10861 gaaacagaat caaaaatgat gaaagaaaaa gatgtaatag attattttat aaaaaataaa
    10921 tcacttattt acactttttt taatatattt gaaaatgaac taaatcattt aaaacaaaca
    10981 catcctcata ttattgattc ttggaaatat tataaagaat ttgaaaaaat atacaaagat
    11041 aaataatcat atcacttaca caaaatcaat aggatcaata tccgcacttg catttttaaa
    11101 ttgcaaaata taattttcaa ttgccactaa agctttatga ttttcacttc taagcaacaa
    11161 ataaaaacga tattttccat acagcatttc aactccacaa attccatagc ctaccaattc
    11221 tacctgtttg atatttctaa attgagaagc aaatttttca caaagttttt gtgcactttt
    11281 ttgatcttta tcttctataa gaactcttaa aaggcgttta aatggggggt aaagatcttt
    11341 tctattttct aactcatctt ttaaaaaagc atcataattc tctatatacc tttcaaaaaa
    11401 agctctattt tttgtttgca aaagtactct tgcttcgcct ttacgccctg ccctgcctgc
    11461 aacttgcata gctaaagcta aagtttcttc actcgctcta aaactaggac gcaacaaata
    11521 ttcatcaagc cctaaaatca cactcaaatc cacactatga taatcatgtc ctttagcaag
    11581 catagaagtg ccaataagta tatcgatctt attttcatta aagtttttta aaatagtatt
    11641 aagcttttta acgcttgtga tttcatcgct atcaaatttt gctatttttg ctaaaggcaa
    11701 agcattttgc aaaagctcta aaagttcagc agtccccatt tttctagctt ctaacatttc
    11761 tcctttgcaa cttggacaat tttgctctat taaagaagta taattacaat aatgacattt
    11821 taaaacattt ttctttttat gcatactcat agcaatagaa caaaaaggac attttatcgt
    11881 ttctccgcaa tccttacaaa tgatttgcct aaaattagcc cttgtaggta aaaacactat
    11941 agcttgcttt tgatgtttta aacttttttc taattcactt aaaagcatag gcgttatacc
    12001 aagctcattt tcatcatata aaaaatgttt tttactctca aaaaaagttc cttttaatct
    12061 aaaacttttt tgtttgtaaa agctcgttaa agatggggtt gcagaaccta aaaccacttg
    12121 aatattattt ttttgaccca aaaaaagtgc taaatctctt gcattgataa aaggctggtt
    12181 agaagcctta taagaattat catgttcttc atctactaca ataagtccta aatttctaaa
    12241 aggtaaaaac aaagccgatc ttgcacccgc tactaaaagc acttctccct tgcaaaaacg
    12301 ctctaaatat tcttgctttt ttttctttga aattttagaa tgccacagga aaaaattatc
    12361 cttaaaatac acttctaaac gcttttgcat ttgtggagta agtgcgattt ctggcatcaa
    12421 aagcaaagct tgcttaccct gttctaaaca ctcttttatc aaagaaatat aaatttcagt
    12481 cttgccacta cccgtatcag caaaaagcaa ggaattattt tctttttgaa gaaaacttaa
    12541 ggcattttgt tgttgattgc ttagtttagg agtatcttta aaaaacattt tgtgacattc
    12601 atacttagga ctagtttcaa aaaaacccaa aacaaaacca agttttgaag cataataata
    12661 aacaataaaa tttgccaatt caaactgcaa aggagttaga aaataccctg taatttcttt
    12721 aatttctacg gttttaaaat caggtttttg acattcttta agcacgatag ctttaaggtt
    12781 ttttttagtt tttaaatcca ctaatacttg tgttaaaggt ttgatttcat caaaactatg
    12841 aaaagttaaa ttatccaaat acaaaccaca aattgcaagt tcataatatc ttatatcaga
    12901 tctttgcatc tagaacttcc tatacacttt aacaaacctt ctttagaatc ataaataaat
    12961 tcaaccatct ctttagcatt taatgcaaat ctatagtgat ttttacctat ttttatccaa
    13021 gatttaaaat cagaataaat aggtgtatca agcaaagaat aatcacaatc atttaaacaa
    13081 taaaagagtt tttctttggc ttgattgttt tgcgcattat ctaaaatttc tggaaaattt
    13141 aaatttttaa gtctcatttg actacgcatt aaagcaagag ctgagcttag catttcatag
    13201 tccattttta attttaaaat tttaacctca tcttttgtag tattgataaa agataaagat
    13261 aagcttgaca aaattcccaa aatcaaaatc acaaaaacaa gctcaagcag agtaaaagct
    13321 ttattcattt tgtcgggagt tcttcattga ttgcttttat tagtttctta agttctcttt
    13381 ctaaaatata attttcataa ctttttttaa caaacgcatc tacaaagcgt ttaagttcta
    13441 tttttttagt accgccagaa atcaaagcga tatcatcttc taaaaaattt gcaaattctt
    13501 cactgcactt aacaatgaaa tcttttgcat taacattaac aatgacttgt tttagattat
    13561 ctgccaagaa cagcctctat tttcttataa atatcttcgc tttctatatt gcgagattta
    13621 agttcttctt ctaaacgcat aatttgatta ctttttgctt cattttgtgc tttaacgctt
    13681 acaagctcat ttcttaaagc ctcattggct tcacaaactt cgttatactt ttcaattaat
    13741 tcatttactt tatctgtcat agtattgatt attttttcat caaacatatt tttgccttct
    13801 taaaaaattt gtaatttatg gaaaatatta tttgatattg tagcagaaaa aaatttaaat
    13861 ttaggttttt attgtcaatt aatttttaat taaagcattt tcttttaaaa ttttttcaaa
    13921 aaataaaaat aaagtagaaa aatgttagaa cttaccagcg aatttaaacc tagtcctgat
    13981 caacaagaag ccataaaagg tatagtaaaa agtataaaaa aaggcaacaa atatcaaacc
    14041 ttactaggcg ttacaggaag tggaaaaacc tttaccatgg caaatgtcat taaagaactt
    14101 aatatgccca ctcttatcat gagtcacaac aaaagccttt gtgcacaact ttatagcgaa
    14161 tttaaaggct ttttttctaa aaatcatgtg gaatatttta tatcttatta tgattattat
    14221 caacctgaag cctatattcc acgcactgat gttttcatag aaaaagacag ctccactaat
    14281 gaagacttag agcgtttaag actgagtgcc actgcttctc ttttaagtta tgaagatgta
    14341 gtttgcatag ctagtgtttc ggcaaattat ggacttggta atccaaatga atacataggc
    14401 atggttttaa tctttgaact aggtatgcaa atttcacaaa aagaactttt aaaaaaactt
    14461 gtagatatgg gttataaaag aaatgataat ttttttgatc gtgcagattt tagagttcaa
    14521 ggagatatta tagatattta tccagcttat tatgaagatg aagtagtaag acttgaattt
    14581 tttggcgatg agcttgatgc tatgtatcat tacaatgttt tagaaaataa aaaaggtaaa
    14641 gatttaaaac gcttcatact ctatcctaca agccagttta gtgtaggtga aacaagacta
    14701 aaacaagcga taaaagacat aaaagcagaa cttaacgaac gccttgctta ttttgaacat
    14761 gaaaataaac tcgtagaata tcaacgcctt aaacaaaggg ttgaatttga tcttgaaatg
    14821 cttacaagca caggaatgtg taaaggcgtt gaaaattatg caagacattt aacagggctt
    14881 aaagaaggtg atactcctta tacgcttttt gattattttg cgattaaaaa taggaaattt
    14941 cttgttatag tcgatgaaag ccatgtatct ttaccacaat ttagaggtat gtttgcagga
    15001 gatagaagca gaaaacaaac tttggtagat tatggttttc gtttaccttc agccttggat
    15061 aatcgtcctt taatgtttga tgaatttatc cataaaaatt gtcaatttct ttttgtttca
    15121 gccacacctg cacctttaga acttgaactt agcaaagaaa acatctttca tcaaatcatg
    15181 cgtcctacag gactgcttga tcctttaata gagttaaaag atagtgataa tcaggttgaa
    15241 attttatttg atgaggctaa aaaagtcata caaagaaacg agcgagtttt agtaactgta
    15301 ctgactaaaa aacttgccga agagcttaca aggtattatt tagagcttgg tataaaagtc
    15361 aaatacatgc actcagatat cgatgctata gaacgcaatg aaattataag aggtttaaga
    15421 agcggtgctt ttgatatgct aattggcatt aacttactta gagaaggact agacctacct
    15481 gaagtttcac tcattgccat tatggatgca gataaggaag gctttttaag aagtgctaca
    15541 agtttaatcc aaaccatggg aagagcagct agaaatgtca atggtaaggt tttgcttttt
    15601 tgcaaaaaaa tcacaaaatc catgcaagaa gctatggata ccaccaatga acgccgcaaa
    15661 cttcaaatgg cttataataa aaaacacaat atcacgccga cttcagttaa acgccatatt
    15721 gaagagagct tgaaaaatga agaggatttg ggcgaaattt atcgcaaagg taaaaaacta
    15781 gaaaaaatgc ctgctaacga aagagcaaaa cttgtcaaag agttaagaaa acaaatgctt
    15841 gaagcagcta aagcacttga gtttgaaaaa gctgctgcaa ttagagatga gattaataaa
    15901 ttaagggatt tataataaaa atatatccct tgttctaact cctgcctcat taagtaaagc
    15961 acttaaaatt tcatactgaa agtcttgcaa gggacgtttt tcttttaaaa ctatacctat
    16021 aaccccttta gttttttccc atcttctata ggtaaataca tagcattagc attaggcagg
    16081 gtattcgtac aaacacctgc tctttcttta tttgttgcaa cccattgagc aatagcaatc
    16141 tcatcggcac taaaacaatt ttttaacatt tgcttatcat cgttaaaaaa aagcaaaggt
    16201 ttcgataaaa tattgttttt atttatagga taaataataa taggcaaatt taataatttt
    16261 aaagcttgat ttccaagttg ttcccaaagc tcttgtttgc ttttcactct tgctaaattt
    16321 tcactatttt caagtaaaat agctgttcta taagctcttt tagtgagttc tttagattgc
    16381 aattttaatc ttctagtaaa aacagctgtt aaaaatccaa ctataaacat agttgtaaaa
    16441 gtaataatat ttccactatc atgaacttta agactaaaaa taggttctaa aaagaaaaaa
    16501 ttataaatca aaacacttac caaagaagaa taaaaggcga aaattttatt gtcagaaata
    16561 aaagaagaag caaaaactgc taaaataaaa atcataacta tattacttgg ctgagtatta
    16621 aatttatgaa atacaaaagc tataaaagtt gctaaaagca aaactcctgt gatttttaaa
    16681 aaacctaaaa aatcaaaacc ttttttactt cgtattttag gagtagaaat ttgattttca
    16741 ttgacaagat ataaatcaat attgggtgct tttttagcga cagcttcaaa aatctcttct
    16801 ttaaactttt tttatcttta tttttgccta aaacaatttt agagacattg ctaaggcttg
    16861 aatactctgc aatttgtctt gctatatcat catcatatac gctaatgatt tcagcatcaa
    16921 aacttttagc tagttctata ttttcttcta aggcttttgc ttctttaata ttgggatttt
    16981 ttatataaag cgcactcaat ttagcatgaa aagctaaagc aagtcttgca gctgcacgaa
    17041 taacctttgc atttgaagca ttaatacaaa ctaaaatatg ctctccagta tgataagcta
    17101 aatcatcatt aataagcctt tgttcacttg ctcttaaatt cactcttgaa gcaagtcttc
    17161 ttaaggcaat ctcacgcaaa gctataagtc tttcttggcg aaagaaattt tcaagtgcta
    17221 gtttagcttg tttttcctta taaattttac catcttgcat tctttttaaa agcttattag
    17281 gttcaatatc aacaagttca aacctgatca gcctcatcaa aaatacgatc aggaatacgc
    17341 tctttaactt ctatcttact gatattagcg actaaatcat ttaagctttc taaatgttgt
    17401 atatttaaag tagtataaac atcaatccct gcttttagaa gttcttctat atcttgaaaa
    17461 cgcttttcat tacgcaagcc tttagcatta gtgtgtgcaa gctcatctac taaaaccaaa
    17521 gcaggctttc tcttaagggt agcgtctaaa tcaaattctt ttaatactat atttttataa
    17581 ggaatttcaa gattagctat actttcaaaa ccttgtgtta agccattgtt tcaggtctat
    17641 cgtgaggctc tatatagcct aaaacaacat caactccatt atcccttaaa gttctagctt
    17701 cacttaacat agcataagtt tttccagaac ctgcagcata acctaagaaa atttttaatt
    17761 ttgcaagttt gtttttttct tcttccttag ctttaacctc aagtttttta gaatttgttc
    17821 aggactttgt ctttgcatgt ttattctttt ttcatggctt tagcaatagc tatattaaca
    17881 gctaaaacat taaccttttc ttccccaaaa atccctaaaa atttagactc ggtattttct
    17941 tgaatgattt tttctagttc ttctttggtg atttttgaag attgacttat cctaggaatt
    18001 tgcactaggg ctgcttgaag actgatatga ggatcaagac ctgatcctga agcacttaat
    18061 aaatccaaag gaatttgttc ttttgtaatt tgcggatttt catctaaaaa tttttgcaaa
    18121 tctttttgca cacgctcttt taaagcagga tttgacatag cataattaaa tccacctaaa
    18181 cttacactgc tttcatttgt atcgcttgta ttgtaatttg acacagatgt tcttgaatgt
    18241 agaaaataag gtttattaaa atcttgaccc aaaagctttg aacctaccgc tttgcttaca
    18301 tccaaagtcg gacgaccttc tttatctact aaacttccac ttgattgata aggaaaaata
    18361 aattttgcaa ctgtatttaa agcaaaagga taaacaagag tacacaatat tagcattacc
    18421 acaaaaaaac taagcaaagt tctaaacata tcacactcct aaaattctaa gtatccaagc
    18481 tataggaata tcaattattt tttatcccta taaaaggtgc gatcatacca cccaaaccat
    18541 aaatacttaa atttcttaaa agcaaatgct cgcttttcat aggcttaaat ttaactccac
    18601 gcatagcaat aggtatgagc aaaggtataa taatagcatt aaaaataagt actgataaaa
    18661 tagcgctttg cggggtagct aaatgcataa tatttaaaat ttgcatttga ggtaaaacca
    18721 cactaaacat agcaggtaaa atagcaaaat acttagcaat atcatttgcc atactaaaag
    18781 ttgtaagact gcctctagta ataagcaaac cttttcctat ttcaactact tctaaaattt
    18841 tagtaggatt agaatcaaga tctatcatat tggctgcttc tttggctgct tgagttcctg
    18901 agttcatagc tatacctaca tcagcttgtg caagagctgg agcatcattg gttccatctc
    18961 ctgtcatggc tactatctta ccttgggctt gttctttttt aatagcttct attttatctt
    19021 caggcttgca ttctgctata aatccatcaa gccctgcttc tttggctata gtagctgctg
    19081 ttaaaggatt atctccggta cacattaaag tttttatgcc catttttcta agctcatcaa
    19141 agcgctcttt aagtcctggt tttactgtgt tttactgtat cctttagata aatcactctt
    19201 aaaatttttt catttttaca cactaccaaa ggagtaccac caagatttga aatttccatt
    19261 accttcgttt ctaaatcgct aggaattttt ccattcattt cgcttatata agctcttata
    19321 gcatcaaaag cacctttgcg aatttttata ttatcttgca aatccacacc actcattcta
    19381 ttttgagcgc taaattcgat aaattcttta atatcattac cttctaattc ataacccatt
    19441 ttttgagcca atgcaactat gcttttacct tctggagttt catcttttaa agaggataaa
    19501 acacaagctt taatcatttc ttctttactt ataccttgaa cttcataaaa ttcatttgcc
    19561 aaacggtttc caaaagtaat cgttcctgtt ttatctaaaa tcatagtatc aacatcacca
    19621 caactttcaa cagccttgcc tgaaagtgcg atcacattaa aacgcgttac cctgtccata
    19681 cctgctattc ctatagctga taaaagcccc ccccctatag ttgtaggaat aagacataca
    19741 agcaatgcta ctaaccatga aataggcaaa ctcacgccta aaaattgcat aaaaggatat
    19801 aaacttacaa ccaccaccaa aaaactcaaa ctaagtacaa ttaaaagagt attaagagca
    19861 atttcatttg gagttttttg acgcgcagca ccttctacaa gattgatcat tttatctaaa
    19921 aaactttccc cagctccaac taaaatttta atctttaaaa aatcagttaa aaccgtagtc
    19981 ccacctgtaa cagaagaaaa atcaccgccc gcttcacgca taacaggtgc actttcacct
    20041 gtaatagctg attcatcaac acttgcagca ccttctataa tttctccatc attaggtata
    20101 agttcacctg ctttaactaa aactatatca cctattttta actcgctaga attaagcatt
    20161 tcttcactgc catcactttt tatgcgtcta gctttagaat cctttttgct ttgtcttaag
    20221 gtagctgctt gggctttacc ccttccttct gcaatacttt ctgcaaaatt tgcaaaaagc
    20281 aagattataa ataaaataaa agtgattaag atgttataaa ttctttcatc agaatttcca
    20341 ttaaataaag taggaaaaat acttaaaatc aaagtaagaa tcgatccaac ttccaccata
    20401 aacataacag gattttttac catcaagcgt ggatcaaatt ttaaaaatgc tccttttatg
    20461 gcattattta aaatttcttt tgtaatgagt ttattttgtt ttttagacat tgactctcct
    20521 taatgccata aagataaata ttctgcaacg cttgataaag taagcactgg aaaaaaagta
    20581 agtgcagcaa aaatatatat aatacaaaca agcacaaaca taaaagttaa attatctgtt
    20641 tttaaagaat ttgcagtatt ttcttgtgta tttttagcca aaagcgatcc agctatagca
    20701 agctgagcta ttaaaaccaa ataacgccca caaaacatag caaaagctgt gcttaaattc
    20761 caaaataaat tatcatcttt taaaccttca agtcctgaac cattatttgc tgccgaagaa
    20821 ctaaattcat acaaaatttg agccaagtca tgaaagctag gattgcttat actatctttt
    20881 gcaaaaacaa cagctaatgc acttaaaaca aggattaata aaggatggat aagaattacc
    20941 aaagctataa gcttcatttg tgcgctttct atttttttac ccaagaattc tggagttcta
    21001 cctatcatta atgcacaaat aaacacggtt aagagcacat aaataatcat attcataagc
    21061 cctactcctt cgccaccgaa agctacattt agcatcatat ttagcaaagt agcactgata
    21121 cttaatggat ttaaactatc gtgcatatta ttaacgcttc ctgcagtaaa agcagtagtt
    21181 acagcactaa ataaactcga accatctgtg ccaaatctta tttctttacc ttccaaattt
    21241 cccaaatttg catttaaacc caaagaatcc aaatttggat ttgacatttt ttcgctaaaa
    21301 taaattaaaa gcaaagaaat gataaaaata atccccattg caccaaaaat aactccccct
    21361 tcttttccca taagagcaaa accttgtctt tcttttctat gataaaccat caatccaaaa
    21421 gctacaacac aggcactagg aataagcatc atggataaaa tttgcaaaaa atttgtaagt
    21481 aaagcaggat tttcaaaagg catgcttgaa ttagcaccaa aaaaaccacc cctatttgtc
    21541 cctaaatgtt ttatagactc aagagctgca acaggacatg tggcaatgct ttgaaattta
    21601 ttttctaaag taagcacgct aaaatttgcg tgataatttt acaccacgcc ttcagagata
    21661 aaattacagc caaaataaaa cttaaaggca acatcaaacg cgtaataata cgcgtaaaat
    21721 cttcataaaa ttcccatttg cataccacat aaagcacgac aaaaagccat acaagcagaa
    21781 tatccacttg cacttgaaac aaacatagca agtaaaatgc ctgtattttg ggaaagcaaa
    21841 cttaaagcac tctctccact ataatgctga aggtttgtat ttgtagtaaa actaattaca
    21901 gtgtttaaat tcaaatcccc tttcatagaa tttatcgaat tgggatttaa aaaaagttta
    21961 tcttgcaaat aaaaaatcac gaaagaaaaa atagccacta aggcattaaa agcaattaaa
    22021 tgcaaagaat aatttttgcc aagtcatatt ttttctatca attgcacaaa ttttataaat
    22081 taagttatca attggattaa aaataaaatc aaaaatagtt tttttacagc ttgcaatttt
    22141 ataaagatag tttccaaaaa ttaaagccaa tataaaagct ataatcagtg ttattaaaat
    22201 ttctagcata tttttccttt aaaatttttc aggatataat aagcataaaa taaataaaga
    22261 gcaagtatta agcttaaaac tagtaaaaac atcatccgca tgtcctagtt tgaatttcac
    22321 aaaaatggat aaaaaatcat aaactaccaa aagctaaaag caaaagcaaa gataacatcc
    22381 ataggatagc cctttctcat tgattcaaaa taggatttat tctatccttg ttaagcttat
    22441 attttgatta atactaattt tatgatttat ttataatttt tatttacatt aaacaaaaag
    22501 ataaatggag aatttagcag gaacaatcct gctaaaattt tttaaagata gcccgctacc
    22561 atagcgataa aataacccgc tatacaagaa gtaattacac ctataagacc tggtaaaata
    22621 aaactatgat taataacaaa tttaccaata tgagtagtac ctgatctgtc aaattgtata
    22681 gtagctaaat cgcttggata agttggtaaa atataatacc cataacaagc agctgcaaaa
    22741 gcaacaatca caccgggttc aacaccaatt cctaaagcca aaggaacaaa agccgaaata
    22801 gccgctgctt gagagtttac aaatttcgaa atcaaaagaa gcattacagc ataagtccaa
    22861 ggatgctctt ttactatatc tccaagcact gctttcatca taggagtatg aactgcaaac
    22921 atagtatcag ccatccaaga aattccaaaa accgcaacaa gtgctatcat gccagattta
    22981 aaaatttcat tagagccaat tttctttgca tctgttttag taaagataac aatcaaagaa
    23041 cctgctaaaa gcatgaacat ttgaatgact gagaccatag ataaaacgtc cattttagga
    23101 ttgcctaaag catctacttg aggaatgcca ttttttacaa cttgacccca atttggacgt
    23161 aaaaaatcaa atacgcccag taaagccact aaaacaatag ctcctaagaa aatccacatt
    23221 gcaacccaat tgctctttgg aagtttaaca cctaaaagtg ttttagaatc cccataaaca
    23281 tattttttaa attcaggatc tttaagtttt tcttgaaata cctcatcttt atccaaatcc
    23341 ttccctctaa accaagaaaa aattcctaca cacaatacgc caaacaatgt actaggtata
    23401 gtaatttgaa gaagattgat ataaccatca aaacccgcta atttatgatt agcatttaaa
    23461 agcaaagcgg tcaaactcac aacagccaca gatacaggag atgcaataat acccatttgt
    23521 gatgatatag aagctgctgc cattggacgc tcgggacgaa taccgttttt aatcgctata
    23581 tcgtaaataa taggcataat agtataaacc acatgtcctg ttccacaaag tatagtcaaa
    23641 aagcaggtta caaaaggcgc taatatcgtt aaaaatttag gattgcgtct taaaattctt
    23701 tctgctattt gaagcataac atcaagacca ccacttgctt gcaaagttgc acttgcaacc
    23761 actaccgcta aaattgtaag cataacatct atagctggtt ttccaggttt tatatgaaaa
    23821 gcaaatacaa gcattaaaat acctatacca ccaagcaaac caagcgctat accacctttt
    23881 tttgcaccgt aaaaaagaca aattaaaacg ataatgattt ggattgcaaa ttgccctccc
    23941 tcactaaggc ttgttaaaaa gtccatttta actcctttga aaatta
//
LOCUS       DARATF010000014        23305 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.014, whole genome shotgun sequence.
ACCESSION   DARATF010000014 DARATF010000000
VERSION     DARATF010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23305
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.014"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            279..1814
                     /gene="guaA"
                     /locus_tag="SB502_000427"
     CDS             279..1814
                     /gene="guaA"
                     /locus_tag="SB502_000427"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEG0433904.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLNLPILGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEVKKDSALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESVWNMGSFAKTQAEKIREEVGNDKV
                     LCAVSGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSEEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLANVTDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRPGLELLRKADVILLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEVLENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            1900..3360
                     /locus_tag="SB502_000428"
     CDS             1900..3360
                     /locus_tag="SB502_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433905.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMMADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKA
                     RQEILAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            3600..4850
                     /gene="purD"
                     /locus_tag="SB502_000429"
     CDS             3600..4850
                     /gene="purD"
                     /locus_tag="SB502_000429"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEG0433906.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHSKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            4847..5299
                     /locus_tag="SB502_000430"
     CDS             4847..5299
                     /locus_tag="SB502_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEG0433907.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIVGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAVRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            5289..7337
                     /locus_tag="SB502_000431"
     CDS             5289..7337
                     /locus_tag="SB502_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEG0433908.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKVSAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYILPGAKSGKITQDYLEEYDKENEHTSLYTVQYFYNNEGQK
                     KLKHRISLDYLNKQNEFYELENLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            7407..9566
                     /locus_tag="SB502_000432"
     CDS             7407..9566
                     /locus_tag="SB502_000432"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEG0433909.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHEKNSQIELKNEIEYPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEISNLEIAKEWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPINIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKYAVLTDIMGLEDH
                     DGDMDFKVAGSKDGVTALQMDIKLGGIDQETLKQALYQAKEGRIHILNIMEEAAKKII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIVEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKSKHLNLSENQSLKVKISEIKNGKISVDLCE"
     gene            9563..10045
                     /locus_tag="SB502_000433"
     CDS             9563..10045
                     /locus_tag="SB502_000433"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HEG0433910.1"
                     /translation="MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRF
                     WPILETLFDVRLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANNLSPIL
                     SQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
     gene            complement(10088..10750)
                     /locus_tag="SB502_000434"
     CDS             complement(10088..10750)
                     /locus_tag="SB502_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEG0433911.1"
                     /translation="MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     IN"
     gene            complement(10768..11952)
                     /locus_tag="SB502_000435"
     CDS             complement(10768..11952)
                     /locus_tag="SB502_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0433912.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISTVFDMVAFLIACSFVTIYFFIHERKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     IFGALIFCGIYFYLQAVVSNVYTLIFVRLLIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGIMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
     gene            12006..12461
                     /locus_tag="SB502_000436"
     CDS             12006..12461
                     /locus_tag="SB502_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEG0433913.1"
                     /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFISSAGTSG
                     EHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN
                     TQNKVLKITDFSPSLNYDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
     gene            12713..13987
                     /locus_tag="SB502_000437"
     CDS             12713..13987
                     /locus_tag="SB502_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HEG0433914.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDVDVSGVLRYRYDT
                     GNFDKNFVNNSNLNNNKQDHKYRAQVNFSAAIADNFKAFIQFDYNAVDGGTGVDNVTN
                     AEKGLFVRQLYLTYTNEDVATSVIAGKQQLNLIWTDNAIDGLVGTGVKVVNNSIDGLT
                     LAAFAADSFMAAEQGADLLGHSTTSTTQATAPFKVDSVGNLYGAAAVGSYDLAGGQFN
                     PQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDKTHANGNLFA
                     LKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEIFYTTGSRLNGDTG
                     RNIFGYVTGGYTFNETVRVGADFVYGGTKTEAANHLGGGKKLEAVARVDYKYSPKLNF
                     SAFYSYVNLDQGVNTNESADHSTVRLQALYKF"
     gene            complement(14102..15223)
                     /gene="dnaJ"
                     /locus_tag="SB502_000438"
     CDS             complement(14102..15223)
                     /gene="dnaJ"
                     /locus_tag="SB502_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEG0433915.1"
                     /translation="MEISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEG
                     FGSSRRRKSSNDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGK
                     LQTCPKCQGRGQVGVSQGFITFAQTCPDCQGIGEKASEKCSDCKGLGYNESKDSVELN
                     IPEGVDTGMKLRVNAKGNILKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQA
                     ILGESIKVPTIRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRMGNQIVQISIKFPTS
                     LNDEQKELLEKLSESFGIKDGMHQEQKGLFEKITNWFKS"
     gene            15380..16051
                     /locus_tag="SB502_000439"
     CDS             15380..16051
                     /locus_tag="SB502_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0433916.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            16048..17283
                     /locus_tag="SB502_000440"
     CDS             16048..17283
                     /locus_tag="SB502_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0433917.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNTYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAIQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEP
                     LKKLRRQVAEVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     SAILEEAKEHLMIDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            17283..17855
                     /gene="recR"
                     /locus_tag="SB502_000441"
     CDS             17283..17855
                     /gene="recR"
                     /locus_tag="SB502_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEG0433918.1"
                     /translation="MVKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCEQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(17852..18388)
                     /locus_tag="SB502_000442"
     CDS             complement(17852..18388)
                     /locus_tag="SB502_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HEG0433919.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHSEFTLDFVDG
                     GTLALQLSYIIARYDRLIVLDCIEAQGASIGDVFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFTYE
                     KIADFSLQELADISYKNY"
     gene            complement(18385..19077)
                     /gene="cybH"
                     /locus_tag="SB502_000443"
     CDS             complement(18385..19077)
                     /gene="cybH"
                     /locus_tag="SB502_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HEG0433920.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVILGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKFVKEEKH"
     gene            complement(19088..20803)
                     /locus_tag="SB502_000444"
     CDS             complement(19088..20803)
                     /locus_tag="SB502_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEG0433921.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLTPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNHVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNVNL"
     gene            complement(20806..21945)
                     /locus_tag="SB502_000445"
     CDS             complement(20806..21945)
                     /locus_tag="SB502_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEG0433922.1"
                     /translation="MIDYHQIESRLSTLEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLENAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SRKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(22065..>23305)
                     /gene="mnmC"
                     /locus_tag="SB502_000446"
     CDS             complement(22065..>23305)
                     /gene="mnmC"
                     /locus_tag="SB502_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEG0433923.1"
                     /translation="KKYGFRVEKTKGFRKREMIKAYLENELEFKDKEAYFSRTFSSLK
                     NKKVAIIGAGISSAVLAYELSLRGFEIDIFEKHLELGKGASGNESGILSSLILKPKVN
                     LGEFSELSFIEASRFYRQILDLEFKGVVEFAHNDLMQERFDTQRENVLFKISKNQAFL
                     EEGGVIFPKKLVKNLFEKSKACIYFNHEFQAYKFENGCFSLKFKNDVVKSDYAVLIYA
                     MGADAKDFVFYDEMKLSKVRGQVTHLKPFLDTPFPLSSKAYICPVKDDLQVIGASYDR
                     LNASLESKEEDDKQNIENIADFMDKNTKLEIIGSKVGFRSYSSDRFMIVGNAYDEAFY
                     KEKYKALLWTKNKEQKPAKMSCNLYFNFAHGSRGFSTSVLAARYLCALINNEPLCLEK
                     KYIHAIHPARFLIRKLKKGL"
BASE COUNT         8263 a         4082 c         3611 g         7349 t
ORIGIN      
        1 tgcttagcaa gcggaaaaga acttaaaaaa tctttgcaaa aaaataaggt ttttaaaggc
       61 ttataatgag gtttatccat caattcatta ataacagcac tagcgttttt agtcatctta
      121 atattatttc tttttcccat aagatgattt tagcatttct tttcttaatt ttcttctgtg
      181 cttgcggata taaaggcaac cctcaataca caagctatga acaaaatggt tcggtaaaaa
      241 ccattaaaaa atacgaacaa ttacataggt ggtaaataat gaaaaaagca gatattttag
      301 ttttagactt tggctctcaa tacactcagc ttatagcaag acgcttaagg gaacaaggag
      361 tttatgcaga aattttacct tttaatgtaa gcttggctga tattaaggcg aaagaaccaa
      421 aaggtattat tttaagcgga ggtccagcaa gcgtatatgc aactgatgcg tatttttgcg
      481 ataaaggcat atttgactta aatctaccta ttcttggaat ttgttatggt atgcaactca
      541 tggcacatca ttacaaagct acagtagcac ctgcaggaca taaagaatac ggcaaagcaa
      601 acatagaagt taaaaaagat agcgctttat ttaaaaatct tccaaaaaaa caaaccgttt
      661 ggatgagtca ttctgataaa gtagaaaatt tacctcaagg ttttgaagtt ttagccacaa
      721 gtgaaaatag ccctttttgt gtttttggaa atgaggataa aaaattcttt gctctacaat
      781 ttcacccaga agtacaacac agcgaatttg gcaaaaatat cttaaaaaat tttgctaaat
      841 acgcttgcaa ttgtgaaagt gtttggaata tgggttcttt tgcaaaaact caagcagaaa
      901 aaatccgcga agaagtaggc aatgataaag tgctttgtgc tgtaagtggc ggagtagata
      961 gtagcgtagt tgctgcactt ttagctagcg ctataaaaga gcaagttata gtagtttttg
     1021 tagataatgg acttttaaga agtgaagaaa aagaacaagt tgaatttatg tttaaaaaca
     1081 ctttaggcat cgatctcatc agcattgatg caagtgaaat tttcttaagt cgcttagcta
     1141 atgtcacaga tcctgaacaa aaaagaaaaa tcataggaaa tacctttata gaagtttttg
     1201 aagaagaagc aaaaaaacat aaagatgtaa aatatctcgc tcaaggcaca ctttatactg
     1261 atatcataga aagttctgtt gtaggtgcaa gcaaaaccat taaaagccat cataatgtag
     1321 ggggcttacc tgaaaaaatg aatcttaaac tcatagagcc tttaaaagaa atttttaaag
     1381 atgaagtgcg tgccttagga cttgagcttg gacttagtaa agaagtagtt tatcgtcatc
     1441 ctttccctgg accaggtctt gctatacgta ttatgggaga agtaaatcgc cctggcttag
     1501 aactattgcg caaggctgat gtaattttac ttgaagaact taaaagtaca ggttggtatg
     1561 ataaaacttg gcaagcattt tgcgtacttt taaatgttaa aagcgttgga gttatggggg
     1621 ataatcgcac ttatgataat gcagtttgca tacgcgttgt agatgcaagc gatggcatga
     1681 cagctacttt ctcgcattta ccttacgaag ttttagaaaa cataagtcgc cgtatcatca
     1741 atgaagtaga aggtataaac cgcgttgttt atgatatctc aagcaaacca cctgcaacca
     1801 tagaatggga atgatccatt ttttctagca cttattttta ttataaaatt tttataaaaa
     1861 taaggctaga atttattcaa gaaatttcaa ggaagaaata tgcatggaaa aatagctatt
     1921 tatatggatt ctacaggacg tggaaccgtt acaaactcag caaatacctt ttttgacttc
     1981 aatcgccaaa tttggaatga taaaaaaagt atgccaagtg ttggtatgct tgtggaattt
     2041 agaactcttt ctagcgaaaa aaaagcagaa gacggcaagc ccgttcaaac aagcaaaacc
     2101 ataacaggta taaaaccttc aaaatttcaa gaatttaaag aaggggattt tatcactgag
     2161 catgattttt ggaaaactga caatgatgat gaattagaag acttgcaaaa ctcaagaaga
     2221 agtgcttata taacagaact ttatagaaca acagactttg acactataga aaaaattcct
     2281 ctttctttta ctatacctca agctatacaa aaatattttg cccatgaaat tttatccgta
     2341 gaaacgcttc aagccaatct acaagatgaa aaggaaattc cttgtatact tgattatctt
     2401 atacttaaaa gatttttatt taaagcttat gatactttaa tttttatgga taatagcata
     2461 gaccaaaccc aatttagcgc attaaaaagc atcatgatgc atttagagaa ttcgtataag
     2521 caaatgatgg ctgatcaaaa accaaatatc actaaaattt ttaacgaaac ttttttatct
     2581 ttgcagtgtc attaccaagc tttagtagcc accatagata caagaaaaaa tcgtctagcc
     2641 tcacttgaag cacaaatgaa aactttacaa tctgaaataa atcttaaaag caatgcgacc
     2701 gatgcagacc ctgaaaaact taaagcacga caagaaatat tggctaaact acaaaaagaa
     2761 gcagaatact acagaacaac actaaaaaga cttgatgcta taagggaaga tttttataag
     2821 aaaaattaca atattttcga aaatgctttt aaactttcac gagaaaagct ctttaaaaaa
     2881 attgtcacag gtttaaatct atgcgcaacc ataatggatg ttaaaatttg gcacttgtct
     2941 ttaaaatcat caggggttaa aaattcttat tttactatga gtaatataga aaattctttc
     3001 tgttctcttt cttttgcaga acattactta agtcgcttaa ataaatccgc tctaaatcct
     3061 tttgatcaaa aacttttagt gtatattcaa aaaatcacaa aagaacaaag aaaaaaattt
     3121 ttagttgtca catcggattt agatttatta tgcaaattaa aaattgaaaa cttttcacaa
     3181 aatccgtatt atttagtaaa atacgcacct aaaaaagtga attatcagtc tttaatgcgt
     3241 gataacacct ttgatatagt ctatattgat gaaaaacatg tttgggaaaa tgttgccgat
     3301 attattttac aaggaaagca ttttgacaaa tcaggaaaaa ccaaatttaa actgatttaa
     3361 gacatagaaa tttaagctaa attaagttat aatttccttg cctaaacagt ttgtggtatt
     3421 taaagtgatc caacacattt ttattaactg cgattgtgtg atttaccgtg ttctgtggca
     3481 tcgtttgagc tttgaaaaaa gtgagaagtt gcagccttta aaaattacct agcggttttc
     3541 tttgactttt tggggtcaat ctttgttaaa cggctgtttg ggtttaaaag gagatataaa
     3601 tgaaaataat gattttgggt agtggtgcaa gagaatattc tattgcttta gccttaagaa
     3661 gagtagacaa aaatttagag ttttattttg ctcctggaaa tggcgctacc gaaagtcttg
     3721 gaacaaattt aaacctaaaa gatccagtag ttttagcaac ctatgcaaaa gaaaaaggtt
     3781 ttgatctttg tatagtagga agtgaaagtt ttttagctga aggggttgta gatattttta
     3841 aacaacaagg acttgctatt tttgggccaa gtaaagctgc tgcaatgctt gaaacctcaa
     3901 aatcttttat gaaaagcttt cttaaaaaat accgtatcaa aacagccaaa tttttaaaca
     3961 caaatgacat tgaaaaagca aaaaatttta tatatagttt aacccctcct atagtagtaa
     4021 aagccgatgg actttgcgca ggaaaaggtg ttatcatagc taaaactcat gaagaagcca
     4081 tagaagaaac agctaaaatg ctgagcggag aaagctttgg agatgctgga aaactcgttg
     4141 taattgaaga atttttagat ggttatgaat taagcatttt tgcagtatgt gatggcaatg
     4201 attttgtttt acttcctgca gcacaagatc acaaaaaatt actcgataat gatcaagggc
     4261 caaatactgg tggaatgggt gcttacgctc ctagctcttt ggcgaatgaa agcttgctta
     4321 gaaaagttca aaaagatatt attttaccaa ctttagcagg tatgaaaaaa gaaggagcgg
     4381 aattttgtgg tgttttattt ataggtgcta tgatcgttgg aaataaacct tacgtattag
     4441 aatttaacgt tcgctttggc gatcctgaat gtgaagtttt aatgccttta atcgaagatc
     4501 ctttagagct tattttagct gctactcaaa gacgcttaag acactcaaaa atcaaaatca
     4561 aaaaagaatt tgcagtaggg gttgtatgcg caagtgaaaa ttatccttac aaaagttcac
     4621 caaaaagtga aattaccgta aataacattc ctgaaaactc tcatatttct tatgctggag
     4681 taagcctaga agatggcaaa ttaatggctg atggtggaag agttttagtt tgcgttggca
     4741 caggaaaaag tatagaagaa gcgcaaaaaa atgcttataa actttgtgat aatgtaaatt
     4801 tcaaaggaaa acaatacaga aaagacatcg ctcatcaggt tctgaaatga aagaaaattt
     4861 acaagaccgc ttagagcgtg aaaatctaaa aatagcaagt tttggaaaaa gagttctagc
     4921 ttttttaatt gatgatatgg ttatttcttt gattgtgttt atcatttttt atgatcgtct
     4981 aatccaagca aaagatttat ttgaaacaac tcaaattgta ggaaattttt accttggctt
     5041 catcttgctt cattttagtt atcaagcaat ttttacttat ctttatggag caagtttggg
     5101 aaaaatatta tgcaaaatta tcatcttgga tgaaaatctt cttgacaaac ccaatctcat
     5161 tcaaagttgc atcaggtctg ccgtaagaca agttagtgct atggcgttta tgcttggatt
     5221 tgcttgggct ttaagcaatg atttacgcaa agcttgggag gattatctag caaggacaat
     5281 agtagtcgat gtggcgtaaa ttttccctat tgctaggaac tagcatagct ttaaatgcag
     5341 cacaagttga tatttacgct cttgatgcaa aaaaagaagg tgatattctt actgcgaaca
     5401 atgatgttat tattttttct gatttttatt tcatcactgc caataaagca atttacaatg
     5461 aaaaaaccgg agatgttgag ctttttggcg atgttaacat cctaagggga caaaacgaaa
     5521 gatcacattc tgattatgct aaaatcaacc taaattccaa tcaagccgat tttagtaatt
     5581 ttttcttttc caataacaat cttgaagtat ggtttcaaag caaaacaagc catctaaatg
     5641 ataaagtctt tgaaagcaaa gtttcagcag tttcaagctg caatgttgaa gatcctgatt
     5701 gggaaattcg tttttcaaaa ggctggctta accgggaaac caattttgtt catctttaca
     5761 atgcaagatt atatgttaaa aataccccag ttttttatct accttatttt ggatttagcg
     5821 ctgatactca tagacaaagc gggcttttaa tcccaaaaat cgttttaaaa agtagcgaag
     5881 gcttatacta tgaacaacct atttatatag ccactcaaga aaattgggat ttagaacttg
     5941 atccacaaat tcgaacaaac cgtggttttg gactttattc tactttaaga tttcttgatt
     6001 ctccatattc aacaggagaa ttaaattttg gtgcttttag ggaaaatagc tcctattttc
     6061 acgatgaaaa tttgaaaaat caaacccact atggaataga actaaaatac tcaagagatg
     6121 atttaatcaa atctttactc agtgataatt ttcaagaagg cctatggata gatgcaacct
     6181 atctcaacga tgtggattat ttaaatttag gaagtaggga ttatcgagat cttaactcgc
     6241 ttgtaacctc caaaatcaat tattttttag ctgatgaaaa caatttttat ggagcttatg
     6301 caagatatta tatcgacaca tctaaactta gcaacaatac aaccttgcaa gaatatccaa
     6361 gctttcaata tcatagattt ttaaataacc tttttgatga acgcctgcgt tattcatttg
     6421 atgcttcatt tcataatttt taccgacctg ctggttctta tgcaaatgag ctaaatttag
     6481 acttgcctat ctcgtatcac aacgcttttt ttggagactt tttacacttt acttttacag
     6541 aaagatttta tgcttctttt gtaaattata gcaacgatcc cgaaagaaac catgagcatt
     6601 atttcagaaa cactcatgat tttaatctct acaccgatct ttcaaaagct tatgaaaatt
     6661 tctttcatac tttaaattta ggggtgaatt acattttacc aggagcaaaa tcaggtaaaa
     6721 tcacgcaaga ttatcttgaa gaatacgaca aagaaaacga acatacaagt ctttatactg
     6781 tgcaatattt ctataacaac gaaggacaaa aaaaactcaa acacagaatt tcacttgact
     6841 atctcaataa acaaaatgaa ttctatgaac ttgaaaatct tttaacttat tattttaatg
     6901 aaaacatcaa tctcaacagc gaagtgcttt actcttatga gcaaagtcgc tttaccaatg
     6961 tcatcagcca aatagaagtc aatacaaatt caaaatttaa ttggatgttt tctcatgctt
     7021 atcaaaacga tgagtatgga aaatatagct ttattggtac aagagcaaat tatattgcca
     7081 cacctaatta caatttattt ggtggaattt ggtttgatac tcaaagagct catgcaaaca
     7141 tgtgggaact tggctatacc taccaaagaa aatgttggaa ctattcttta atgtatagag
     7201 aaagaatcga tccacaactc acaagtggtg gcatcacagc taaaaatcaa agcggagttt
     7261 attttatttt caacttctat cctttaggag gagtaaaata cgatttctct ttagcagaaa
     7321 gtgaaaacaa aatttaaaaa ggatgaaatt tgctaaatat tttaaaaaat tttacgaatt
     7381 tattatctgg taaaaaagga aaaataatgc aatacagcat agaaattaac aaaaatacag
     7441 aaatatttga tatagacaaa gtcgccaaac aagctgccgg tgctgtttta atgagacaag
     7501 gcaaaagcgt tgttctagct acagttgcaa gagaagaaaa acaagttgaa gaagattttt
     7561 tacctctaac cgtccaatac atcgaaaaag cttatgccgc aggaaaaatc cctggtggtt
     7621 atgtcaaaag agaaaccaag ccaagcgatg cagaaacctt aacagcacgc attattgata
     7681 gaagcttacg ccctcttttt ccaaaaggct atgcttatcc gactcaaatc gttgtgatgg
     7741 ttctctcagc tgatcctaaa gtagatttgc aagtaatgag cttaaatgcc gcaagcgtgg
     7801 cactttatct tagtgatata cctatgaaag ctccagtatg tggtgtgcgt ataggaaaga
     7861 tagatggaaa tttcatactc aatccaaaca atgaagagct tcaaaatagt accctagatc
     7921 tctatgtagc aggtgtaaaa gatgagcttt tgatgataga aatgagagcc ttacctgatc
     7981 aaaaagaaaa tgaaatcttt atcgaagctc cttatgctga tgttttaact caaaccactt
     8041 cacaaaatat gaatgaactt agcgaagatg aaattttaga agctctaaat ttagctcaaa
     8101 aagctatatt aaatggttca aatgcttatg aagaagcctt tagcaaacac gaaaaaaatt
     8161 ctcaaatcga actaaaaaat gagattgaat atcctgaaat tttagctttt atagaaaata
     8221 atttccaaaa acaaatcaaa gaagccatca accaaatggc aaaaagcgaa agagcaagcg
     8281 aactaaataa aatcgctaaa gaaatttcaa atcttgaaat cgctaaagag tggagcgaag
     8341 aaagtgtctt aaatacctta gctaaagtca aacgcaaact tattcgtgag caaattttaa
     8401 atgaaggcaa aagagctgat ggtagaagtt taaacgaagt gcgtcctatt aatatagaaa
     8461 ccaacatctt accaaacgct catggttctt gtcttttcac tcgtggacaa actcaagccc
     8521 tagtggttgc aaccttaggc ggagaaaacg atgctcaaat gatagacttg cttacagaaa
     8581 aaaatcctat aagcgaacgc tttatggtaa attataattt tccaggtttt tcagtaggcg
     8641 aagcaagtcc tatcaaagct ccaggaagaa gagaactagg acatggaaat ttagccaaaa
     8701 gagcacttta tccaagtgtg gatgaaaact atccttatgt aatccgctta gtcagtgaaa
     8761 ttttagaaag caatggctca agttctatgg caacggtttg cggcggatct ttagccttaa
     8821 aagcagcagg agtgccaagc ttaaaacttg ttgcaggagt agccatgggg cttatctttg
     8881 aagataacaa gtatgctgtt ttaacagata tcatgggact tgaagatcat gatggggata
     8941 tggactttaa agtagcagga agcaaagacg gcgttactgc tcttcaaatg gatataaaac
     9001 taggtggaat cgatcaagaa acactaaaac aagctttata ccaagccaaa gaaggaagaa
     9061 ttcacattct aaatatcatg gaagaagccg ccaaaaaaat catagtcaat gaagaagttt
     9121 tacctaaact tgagcttttt agcgttgatc cttcaaaaat cgttgatatt ataggacaag
     9181 ccggaaaaac catcaaagaa atcgtagaaa aatttggcgt ttctatagac ttagatcgcg
     9241 aaaaaggtga agtaaaaata gcaggtagtc aaaatgagca aatcaaagcc gcaaaagact
     9301 acatcataaa catcacaagc tctcaaaaag gaactaaaaa aggctctaaa gacaaagata
     9361 tatcaggctt tgaacttggg caagaatttc aaggtattgt taaaaaaatc gctccttttg
     9421 gagcctttgt ggaacttaaa aatggtgttg atggtttatt gcatagttca aaaagcaagc
     9481 atcttaattt aagcgaaaac caaagcttaa aagttaaaat cagcgaaatt aaaaacggaa
     9541 aaatttctgt ggatttgtgt gagtgagcga atttctaact catccttttg agcctttttt
     9601 tgacaaagat tctaaaatct taattttagg atcttttcct tcggtaaaat caagacaaga
     9661 tggcttttat tatcaacacc caagaaatcg tttttggcct atactagaaa cactttttga
     9721 tgtaagatta gaaaatatca cagaacaaca agccttttta agaaaaaaac atatcgctct
     9781 ttgggatgta cttcaaagtt gcaagataaa aaattcagat gataaaacta taagttatgc
     9841 aaaagccaat aatttaagcc cgatcctttc tcaaaccaaa atccaagcca tttttactac
     9901 tggacaaagt gcttataaat tttttattaa attccaccct cgcttaaaag ccatagctct
     9961 accctcaact tctcctgcaa atttaaattt ttcttttgaa cagcttttac aaaactatga
    10021 aataatcaaa aaatttacaa aataacaaac taagcattac ccccccccaa gtaaaacaag
    10081 aaaaaagcta gttaatatct agcttttgcg tgttatcctt gaattcaaat tccactctct
    10141 tagctccaaa acctttagca atagcttcta aagtatcctt agcactttta tgaattttac
    10201 tttctaaatt ttggataaga tttaaagaca agtctttaac ctcatctttg gcttctttta
    10261 tgagtttgtt tttatcactt tcgctaaaac taatccccgt actattgata gaatcaggca
    10321 gtaaaaaagg taaaaattta gcattttttt catcataaaa tttcatatct atgatgctgt
    10381 gtttgtatct acactctggc atgatgatct tataagcatc gtcccctaaa ggcaaaatat
    10441 caaagttttt atcccttaaa tcatacaaga aagtgatctc aaattcaaaa atcaaagcaa
    10501 tctgtctttc actcaaagac catcctaaaa gatttttcca aattccatta aaagcgctat
    10561 cttttttagt gacaatctct ttactaaaaa cttgaaaaac acttaattct cctatggatt
    10621 taagctgcat gatatcgcta aaactttgcg tgcttttttc ttctatttta gggcttttat
    10681 actgcctaaa aagcactaca aacaaaagta caagtaaaat catcactaaa acaaataaaa
    10741 tcatttccat tttaaacctt tctaaattta taaaccttga tttgaaaaga tatatttttt
    10801 ctcaaacgct aagaaaataa aagcattaat gataaaaatc aaacacacaa aagtaaaaac
    10861 aaattccacg ctaaaatgtg aagccataat ccctccgcca aaagctccac aaaaatttcc
    10921 caaaaattga caagtttgat taaaaccaaa aatcacactt aaatttttag cactcacact
    10981 ttttttaagc aaggcattca cacaaggcaa aagccctcca agtcctacac ctataagtaa
    11041 acgcacgaaa ataagcgtat aaacattact tactacagcc tgcaaataaa agtaaattcc
    11101 acaaaatatc aaagctccaa aaataatctt actaggccct atcttatcgg cgatttttcc
    11161 aagttttggt gcgaaaaaaa gattgctaat cccacttgca gccactacta tacccgccca
    11221 aagagccaaa tttccacctt gatgaatttg ctcaacatag atacttaaaa tcggcatcac
    11281 tccaaaagta ccaaattgta tcacaaaagt agtgataaaa agaacgataa taagggtttt
    11341 gttttctttc actttttgag tatttttctt cgcctctttt tgaatttttc tctcatggat
    11401 gaaaaaataa atcgtcacaa aagaacaagc gatcaaaaaa gccaccatat caaaaaccgt
    11461 actaatacta aaaaattcag ccacaaagcc accaaacaaa ggcccaagca aacttccact
    11521 tatagaagcc gtagaaagag ttcctaaagc ataagccact ttttctttag gtgctatcac
    11581 agcgataaac acaacagcag cagaagtaaa acctgaaatt atccctgtta aaccccgcac
    11641 aaaaactact tctaaagcac tatgagcaaa gctaagccat aaggttaaaa ccgacatccc
    11701 aaaacttgca cgaagaagca tatttttata accatacttt gcacccaaaa aagcccacaa
    11761 aggtgaaaaa acagccataa aaagtggagt gatcccaaaa gcaagccctg agtaaaacgc
    11821 tatttcactc gtatcaacat gtcctagttc tttgatataa aaaggcaaaa tcggagcgat
    11881 ttgactaagc cccatacttg tggtaaaaac accaaaccaa cacacaagca aagttctatt
    11941 gaaattttcc atggatttat tgtatgatat tttttataat ttttaattaa aactcaagga
    12001 taaaaatgaa aaaaatactc tttatatgct taggcaatat atgccgttcg cctatggcag
    12061 aatttatcat gaaagatctt gtcaaaaaag caaatttaga aaaagaattt tttataagca
    12121 gtgctggaac ttcaggagaa cacgatggag aaggtatgca ctatggcacc aaaaacaaac
    12181 ttgctcaact taacatagaa cacaaaaact tcacaagcaa aaaactcact caaaagcttt
    12241 gcgatgaaag cgatttttta atcaccatgg acaattctaa cttcaaaaat gttttaaaaa
    12301 acttcaccaa cacccaaaac aaagttttaa aaatcactga ttttagtcct agtctaaact
    12361 acgatgaagt ccctgatcct tggtatagcg ggaattttga tgaaacttat aaaattttat
    12421 ccctagcttg taaaaattta cttgtttttt tatcaaaata atttaaaaca actatatatt
    12481 acttctcgtt tactttttag gcttatactt ctaaacgaac cgaaaaacat tcataagaaa
    12541 aactccttaa aattacacgc ctagcttaaa tccctttagc taggcttttc tttagatgtt
    12601 tttatccttc ggatttaaaa tttttactat tttaagtgct tcttaagaaa aaactccaaa
    12661 tttatgtgct acaattacaa tgttttatta atttttgaca aggagaattc tcatgaaact
    12721 agttaaactt agtttagttg cagctcttgc tgcaggtgct ttttcagcag ctaacgctac
    12781 tccacttgaa gaagcgatca aagatgttga tgtatcaggt gtattaagat acagatacga
    12841 tacaggtaat tttgataaaa atttcgttaa caactcaaat ttaaacaaca acaaacaaga
    12901 tcacaaatat agagcacaag ttaacttcag tgctgctata gctgataact tcaaagcttt
    12961 cattcagttt gactacaacg ctgttgatgg tggcactggt gttgataacg taacaaatgc
    13021 cgaaaaagga ctttttgttc gtcaattata cttaacttat acaaatgaag atgttgctac
    13081 aagtgtaatc gctggtaaac aacaattaaa ccttatctgg acggataacg ctattgatgg
    13141 tttagttggc acaggtgtta aagtagtaaa taacagcatc gatggtttaa ctctagctgc
    13201 ttttgctgca gatagcttca tggctgcaga gcaaggtgca gatttattag ggcatagtac
    13261 tacatctaca acacaggcaa cagctccttt taaagtggat tcagtaggaa atctttatgg
    13321 tgctgctgct gtaggttctt atgatcttgc tggcggacaa tttaatccac aattatggtt
    13381 agcttactgg gatcaagtag cattcttcta tgctgtagat gcagcttata gtacaactat
    13441 ctttgatgga atcaactgga cacttgaagg tgcttactta ggaaatagcc ttgatagcga
    13501 acttgatgat aaaacacacg ctaatggcaa tttatttgct ttaaaaggta gcattgaagt
    13561 aaatggttgg gatgctagcc ttggtggttt atactacggt gataaagaaa aagcttctac
    13621 agttgtaatc gaagatcaag gtaatcttgg ttctttactt gcaggtgagg aaattttcta
    13681 tactactggt tcaagactaa atggtgatac tggtagaaat atcttcggtt atgtaactgg
    13741 tggatatact ttcaacgaaa cagttcgcgt tggtgctgac ttcgtatatg gtggaacaaa
    13801 aacagaagct gctaatcatt taggtggtgg taaaaaactt gaagctgttg caagagtaga
    13861 ttacaaatac tctccaaaac ttaacttctc agcattctat tcttatgtga acctagatca
    13921 aggtgtaaac actaatgaaa gtgctgatca tagcactgta agacttcaag ctctttacaa
    13981 attctaagaa gctttcaagt ctaacttcaa ggcggagttt tgctccgcct ttttttatgc
    14041 ctgattttta aaacttaaat ttatataaaa aattttccca agctaaaacg ctttaggaaa
    14101 attaagactt aaaccaatta gtgatttttt caaaaagccc tttttgctct tgatgcatac
    14161 catctttgat gccaaaactt tcacttagtt tttctaaaag ttctttttgt tcatcgttta
    14221 aagaagttgg gaatttgata gaaatttgaa cgatttgatt tcccatgcga gaactatgaa
    14281 catcttttac cccttctttt tcaagaacaa atctttgtcc atctttagca ccctttggta
    14341 aatttaaggt cgcttcaccg cgtatggtgg gtacttttat actctctcct aagatagcct
    14401 gggtaaaaaa cactggaaat tctatatata tatcatcatc atctctgata aaagtatcat
    14461 cttcagcggc gatgatctta acatacatat cccctctagt accatttttt aagatattac
    14521 ctttagcatt gacacgaagc ttcatacctg tatctacacc ttctgggata ttaagctcga
    14581 cactatcttt gctttcatta taacccaaac ctttacaatc actacatttt tcactagctt
    14641 tttctccaat tccttgacaa tcagggcaag tttgtgcaaa agtgataaaa ccttgagaaa
    14701 ccccaacctg tcctctacct tgacactttg gacaagtttg aagctttcca tctttagccc
    14761 ctgttccatt acaagtttta caagagcatt tataagtaaa gtctatattt ttcttacaac
    14821 caaaaaccgc ttctttaaaa cttaatttta aattaacgat aaaatctgaa gggattttct
    14881 catcatttga actttttcta cgacgtgatg agccaaagcc ttctccaaaa aaactagaaa
    14941 atatatctcc taaatcctca aaaccaccaa aacctgagct actagaacca aatccaccgc
    15001 cttttaaagc atcttttccg tatctatcat aaatagctcg cttttcatca ttgcttaaaa
    15061 cttcataggc ttcattaaca agcttgaatt tatcttctgc ttctttatca ccttggtttc
    15121 tatcaggatg atattttaaa gccatttttc tataggcttt ttttatggtt tctttatcag
    15181 cattttgcgt gatttcaaga atttcataat aacttatttc cacattattc ctttaaaaaa
    15241 tttaaaattt tactagaatt ttaattttaa aaattcaaaa atataatttt agcaaaaata
    15301 aaatcaataa tttatcaaat tttaaataaa attatgtaaa gattttaaag actacataaa
    15361 aatttacaag gacactagaa tgattaatgt gttgatgata gaagatgatc ctgactttgc
    15421 acaattatta tctgaatatt tagcgcaatt taatattaaa atcacaaatt ttgaaaatcc
    15481 taaaagtgct ttaaatgtgg gtattcaagg ctatgattgt ctgattttag atttaacttt
    15541 acctggaatt gatggtcttg aagtttgtag agaaatccga caaaaaagca atattcctat
    15601 tatcatctca tcggctagag gtgacttaag cgataaagtt gtggggcttc aaatcggtgc
    15661 tgatgattat ctaccaaagc cttacgatcc aaaagaaatg tatgcaagga ttatgagtct
    15721 tattcgtcgc acaaaaagag ttgaacacac taataatgaa aatattaact ctgctttcaa
    15781 aattgatgaa agaagacatg agatcaccta tgaagataag gttttaacac ttactcctgc
    15841 tgaatttgaa attttagaat accttatcca acaacacgga tatagtgttt caagagaaca
    15901 gcttgtaagt cgctgtaaaa atctaaaaga taaagattct aaaagccttg atgttatcat
    15961 cggtcgctta agggtaaaaa taggagatag ttcaaaatct ccaaaacata ttttttctgt
    16021 tagaggtata ggatataaac tgataggatg acaaaaaatt attctattca taccaaactg
    16081 attattttat ttgttgttac ttttttcttg gtttgtgtgc tttttatcgt tcttttaaaa
    16141 atagaaggga atacctataa tgaagaagaa agtttaaaac aagaaaatct tataaaaaat
    16201 ttactcatct cctatgaaaa cacttcaggt gttgaaatag gagcttatct tggaaacagc
    16261 ggttttaacg ctatacaaaa tcccaatctt gtaaaagcta taagaaataa tggacaatca
    16321 ctttttaaag caggcggaga gctttgtact ctttcttctt taaaatatca tagcaatctt
    16381 tattttgatg ttcaatgtaa agattttgat ggcttgtatg aagaaaatac tagtgatagg
    16441 gtttataatc ttttattgat aggatttttc tctttttctt tgttggttgt ttttatgtat
    16501 ttttctgtat taaaatcctt agaaccttta aaaaaattaa gaagacaagt tgccgaagtt
    16561 gcaaatgggg aacaacctga ttttctagac tatcaagaag atgaagtagg caagatcgcc
    16621 tttgaatttc aaaaagcttt caagaaaaac caagaattaa tccaatcaag acaacttttc
    16681 ctaagaacaa tcatgcatga gttaaaaacc cctataggaa aagggagaat catttctgaa
    16741 atgatcaaag aagacagaca aaaagaaaga cttatcgcta tatttttacg catggattct
    16801 ttgatcaatg aatttgccaa aatcgaaaat ttattttcaa aaaactacaa cttacacttt
    16861 aaacctagtc gttttagcgc tatacttgaa gaagctaaag aacaccttat gatagatgat
    16921 tttaataaag ttgtaaaagt cgatataaga tatgacgctt taatcaatgt tgatatggaa
    16981 attttctctg taattttaaa aaatcttatc gataatgcct taaaatactc aaacaatggc
    17041 acttgtgagc ttttttgttg taaagaatgt tttaccatta aaaatccagg caaaccttta
    17101 gcagaaccta tagagcatta tcttgaagct tttacaagag aaaaacacaa tcaagtcaaa
    17161 ggtatgggac taggacttta tatagtttca gaggtatgta aactgcataa ttttgatttg
    17221 atttattttt atgatgatgg aaagcattgc tttaaaattt tctttggaga taaagaaaaa
    17281 taatggtaaa aggcctggaa aaattcaatg aacttgttga aagttttgca aatttaccta
    17341 ccataggaaa aaaaaccgcc ataaggcttg cttatcacct ttgtataaat aatcaaatcg
    17401 atggtatgaa actcgcacac aatatagaaa atgctatccg ctttataaaa ccttgtgagc
    17461 aatgcggtgc tttaagcgaa aatgagcttt gcgaaatttg tagcgatgaa gaaagaaata
    17521 aaaacatttt atgtatagtt gaaagcccaa aagatatact aacactcgaa gagagtcaaa
    17581 gttacaatgg gctatatttt gttttagatg agttaaatga agaaaaactt gaaaaactaa
    17641 agcaaatcat acttaagcta aatatctctg agctcatttt tgcattgaca catagcatta
    17701 attctgatgc aactatcttt tttatagagg ataaatttaa aggcttaaac ctaactttta
    17761 gtaaaatcgc tcaaggaatt ccaagtggtg taaatttaga aaatgtggat ttaatctctt
    17821 taaataaagc tatgaatttt agaacaaaaa tttagtaatt tttataagaa atatcggcta
    17881 attcttgcaa agaaaaatcc gcaatctttt cataagtaaa accttccttg cttaaaaagt
    17941 caagtaaagt tttttccatg attttagctc cttgtataag ctcatctgag agcttaaaac
    18001 tcatcgcttc aatacgcttt ggcacacaag ctaagatatg tgttttaggc aaatctcctg
    18061 caagttccat gtattgtaag gtttgaagca tttctatttc atgggcactt ccactccagc
    18121 taattttatt aggcatagca tcataaggaa agaaaaatac atctcctata ctcgcacctt
    18181 gcgcttctat acagtctaaa acgataagtc tatcgtacct agcaatgata tagctaagct
    18241 gcaaagccaa agttccacca tcaacaaaat ctaaagtaaa ttcagaatga gtgaatttgt
    18301 agtttttttc aagttgtttg caaagatgaa cgcctaagcc ttcatccgca aacatgatat
    18361 tacctattcc aaggactaag aatttcaatg cttttcttct tttacaaatt tatatccgct
    18421 aataatagca tccatagcac catctttacc ttttactgcg ttaaaaatcg ccatgtaaat
    18481 atgtactggc acaaaaatca taattaccca catcaaaatt ctatgataag ttcttacatc
    18541 ggccaaaccg cccattgcag cttcaagcgg tcttaaaata tgatataaaa gcccacctaa
    18601 gccctcatgg taagtatgag tataaagaat aagccctgta agaatgatac ctaatatcac
    18661 aagataaaag aaaaaataag ttacaaattg caaaggatta taaacccctt ttaaatgcgg
    18721 atgttttcct aagaaaatgt aaaattttac ttgttctatc cataatttga tattaaaaat
    18781 atcccataca cttctgcgtt cttttgcgct taccttatcg cagaaaaaca aatatacttt
    18841 aaaaataata caagcgatta aaacaaaacc caccgcttga tgtactaagc ggtattttgc
    18901 ttgcataaaa tttacgggtt caccgttact aatagggctt tggaacacat aggaaagata
    18961 ataccctgtg ccaataagaa tcactatagc aatagctctt acccagtgcg ttaaacgcaa
    19021 acctatgcta aattcatatt cagcttttct ttgcaatttt tcttctttgt tttgcatgaa
    19081 agcctcctta taaattgaca ttcactttat attcacttag attattgccc ttagtatcca
    19141 ttacatgcac cgcacaagca atacaaggat cataagagtg aatttttcta atgatttcaa
    19201 gtggttgttt tacatcagcg attttaagtc ctatcaaaca ttgctcataa cttccgccta
    19261 cgccatttgc gtcttttgga cttgcattcc aagtagaagg caccacagct tgccaatttt
    19321 caataacacc atttttaatt ctacaccaat ggcttaatgt tccgcgtggc acatgcccca
    19381 tatagcgtcc tttgtattct ttagaattat cgatcacata aggagcacaa gtactctggt
    19441 ctacttttaa attttcaact aaattattaa acgcttttaa agcattgttt gcaacgattt
    19501 ttgcttcaat acaacgagca gctgttcttc caagtgtact aaatacagca tttaaaggaa
    19561 gtcctgtttc ttttaagaac tcatctacta caggaacaac attttgatta cctttagcat
    19621 aatttacaac gatatttgct aaaggtccta cttgcatagg gtttccttca tagcgtggag
    19681 ctttaatcca actatattta cccttagtat caaacacttt agaatgaaca tgatttccat
    19741 gatgatctac gctttcccca tctacaagtc ctgtataatt tggatttgtt ttgccgtcat
    19801 aaggatgtaa aggttcattg tctgcatacc aagaatgagt tgcctcttca gtaatcttat
    19861 cttcttctac ttcataaacc ttgcttaaat ctccattttt gataatacca ctttcaaaaa
    19921 gccattcatc tcttccgatt tgaaattctt taaaggtgta aagattattt acccctatat
    19981 catttaaaac acttgcttca tgtgcataag cttttcctgc catcacaaga tcaggataat
    20041 acgcacgatt aacaaagtct tgcacttctt ggaatttaac catatattca cccattcttg
    20101 caggatcaag taaatccata acgcaagtta caccaccaac ggttaagctt tgtggatgtg
    20161 ggtttttagc tccaaaaatc gccatacatt gagcaatgat tctttgaatt cttaaacatt
    20221 ctagatagtg agaaagaacg attaaatttt gctcaggagt taaacgataa gttggatgac
    20281 catagtacgc attagcaaaa ggtcctaaat ttcctttatc tacaaaagtt ttaagtcttt
    20341 gttgcacttc aagaagttta tctgcacctg ttgcataagg atttgaagtg tatttaaaag
    20401 cttcatcgct tgctttttta acatcagcac ttaaagcact taccacatca gcccaatcaa
    20461 gcccatgaag ttgataaaaa tgcacaatat gatcgtgtaa aaataaagcc gcattcatta
    20521 aagttcttgt taaaagcgca tttaaaggcg gagtaatacc taaagcattt tcaacagcaa
    20581 ctatacctgc tttataatgt gaaaaagtac aaactccgca aattctttgc gtcataaaac
    20641 ccgcatctct tggatcacgc ccttttacta tggtttcaat accacgccac aaagtagagc
    20701 ccgcataagc ttcttttacc acattgttat catcaacaac aacctcaact cttaaatgcc
    20761 cttcaattct tgtaatagga tctacgatta ttttttgact catttttatt ccttatcttt
    20821 ttgcatggaa gatataactg cgtgtgctgc tatagcaacg cctgtgagtg taagcacacc
    20881 tataccaatt ttatctgaaa cactatccgc acccaaacca aaaacagtat caaatttacg
    20941 actagccata ggctcttcaa aaggtcccat agtatcccaa aaattaggct cagaacaacc
    21001 tatacaacca tgccctgctt gaataggcca agaagtgtgc tggttaaatc tctctcttga
    21061 gcagttatta aaagtataag gtcctttaca acctacttta taaagacaaa aaccttgttt
    21121 tgctccttca tctccaaaag catgtacaaa ttcacccgca tcaaaatgtc cgcgtctttc
    21181 acaaagatca tgaattctta aaccataagc ccattttggt ctattataca catcaagtgc
    21241 tggtaactca ccaaataata aataatgaag tacattaccc actatatttt tttcacttgg
    21301 aggacagcct ggaacattga tcacagtttt acttgttact ttgcttaaag gctgcgcgtt
    21361 gctaggattt ggtcttgcgg cttgaattcc tccaaagcta gaacaggttc ctatagcaaa
    21421 aatcgccaaa gcattttcac ttgccatttt tgaaagctca tagcctgttt ttccatgtgc
    21481 acctatggtt aaaaaatgct ccgtatcacc catagggata ccaccttcaa ccattaaaat
    21541 gtatttattt ttatgctttt gaatggcatt ttctaaattt tcttcagctt gccaacctgc
    21601 tgcagccatc actgtttcgt gatattctaa agaaatataa tcaaaaatca aactatcaat
    21661 cgttggagta tcacttctta acaaactctc actacagcct gtacactcag ccatatgaag
    21721 ccacacaaca ggaagcctat cagcaagctc agcagctttt gccaccatag gagtaaaact
    21781 cgctggcaaa gccaaaaatg ccgtcatagc acctgcccat ttcataaaat cccttctaga
    21841 aaaacctgac ttttctaatg cttttgtaat actatcattg tctttcaaag aaggaagttt
    21901 ttcaagagtc gataaacgcg actctatttg atgataatca atcattatat ttcctttgta
    21961 acatgaaatt tattctctat aataataaaa taaaggaagt taaaataaag ttaaaaactt
    22021 actatcataa gcaaatatta gcatcactct taattaaagc ttaatcataa gcctttttta
    22081 agtttgcgaa tcaaaaatct tgcaggatga atagcgtgga tgtatttttt ttctaaacac
    22141 aagggttcat tatttatcaa tgcacacaaa taccttgccg ctaaaacact tgtactaaaa
    22201 ccccttgacc catgagcaaa attaaaatac aaattacaag acattttagc tggtttttgc
    22261 tccttatttt ttgtccataa taaagcttta tatttttctt tataaaacgc ttcatcataa
    22321 gcatttccaa ctatcataaa gcgatcactc gaataagatc taaaacctac tttagaacct
    22381 atgatttcta attttgtatt tttatccata aaatcggcta tattttctat attttgttta
    22441 tcatcttctt cttttgattc taaacttgca ttaagcctat cataacttgc accaattact
    22501 tgcaaatcat cttttacagg gcaaatataa gccttagaag ataaaggaaa tggggtatct
    22561 aaaaaaggtt ttagatgtgt aacttgacct cttactttgc ttaatttcat ctcatcataa
    22621 aaaacaaagt cttttgcatc tgcacccata gcataaatca aaaccgcata atcactttta
    22681 acaacatcat ttttaaattt taaactaaaa cacccatttt caaatttata agcttgaaat
    22741 tcatgattaa aatatataca agctttgctt ttttcaaaaa gatttttaac caattttttt
    22801 ggaaaaatca ctccaccctc ttctaaaaaa gcttgatttt ttgaaatttt aaacaaaaca
    22861 ttttctcttt gcgtgtcaaa tctttcttgc attaaatcat tatgtgcaaa ctccaccaca
    22921 cccttaaatt ctaaatctaa aatttgtcta taaaaacgac ttgcctctat aaaagaaagc
    22981 tctgaaaact cccctaaatt taccttaggc tttaagatta aagagcttaa aattccactt
    23041 tcatttccac ttgcaccctt gcctaattct aaatgttttt caaaaatatc tatttcaaaa
    23101 cctcttaaac taagctcata agctaaaaca gcacttgata tacctgcacc aataatagct
    23161 acttttttat tttttaaaga tgaaaatgtt cttgaaaaat acgcttcttt gtctttaaac
    23221 tcaagctcat tttccaaata agctttaatc atttctcttt ttctaaaacc tttggttttt
    23281 tctactctaa aaccatattt tttta
//
LOCUS       DARATF010000015        23083 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.015, whole genome shotgun sequence.
ACCESSION   DARATF010000015 DARATF010000000
VERSION     DARATF010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23083
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.015"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            76..927
                     /locus_tag="SB502_000447"
     CDS             76..927
                     /locus_tag="SB502_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HEG0433924.1"
                     /translation="MKFYTILSILFISFMLSACAVLQKSSPLQENKDFYILDTHTQKK
                     ISFEDMILELLKADVILLGEKHDEVKHKISQVMIFNALEGNLSSQNINFDVALEMLAS
                     TEQNHLDKAFKNKKTIKANELTNALNWDKVWKWKDYEQFVNVVFYSKSKILGVNLSRS
                     EITSIYNGAQPLKGYVSTTNEVKKQLFDIISLSHKLNPEENKELLDKLVEIQQFKDRR
                     MADVLVHHVNKVLLLAGSYHTSKKIGIPLHIQDFKSSKKIVVVNLSYGEIDLKDSDYV
                     LIYKGEE"
     gene            924..3190
                     /locus_tag="SB502_000448"
                     /pseudo
     CDS             924..3190
                     /locus_tag="SB502_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343636.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            3202..3963
                     /locus_tag="SB502_000449"
     CDS             3202..3963
                     /locus_tag="SB502_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEG0433925.1"
                     /translation="MLKKMFLFCFLLLNLNAEVNATDTNLSFDSPKIETEAPKIEFSL
                     SSLYQNADEVVKGVIYILVLFSILAWTVFISKLMQFYFMKKNLDLSIQKIKELKNLNE
                     LDQTKDFAGVLSLEIQDELEKSEYKNDHIKERMELRLQNTISKQITASKNGLSLLASI
                     GASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLIAAIPAVLF
                     YNYLTRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            3950..4360
                     /locus_tag="SB502_000450"
     CDS             3950..4360
                     /locus_tag="SB502_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEG0433926.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLSSALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKMD"
     gene            4362..5108
                     /locus_tag="SB502_000451"
     CDS             4362..5108
                     /locus_tag="SB502_000451"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEG0433927.1"
                     /translation="MKSSVIFGFVLSLILHTLVLMFSLFSFYIQEKSSGVDFKQGAEF
                     TSIMMVSEPPIGELKEVSIDQKKSNSQDKNKKQDERISLNSQDKNAVLKVQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNEDKTQTIVSGNAKEQVKSYQALLMAHLTK
                     FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLP
                     KPPKEMLKNGDKISFVMPIDYNIKDYLGKK"
     gene            5154..6359
                     /locus_tag="SB502_000452"
     CDS             5154..6359
                     /locus_tag="SB502_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HEG0433928.1"
                     /translation="MIMFSSFFKSKKWALWAYLGLFLLLFFLYIQTSLNVAINSWYSD
                     FYNVLQKPKIELLDSNSTQKIEENLENNATLIQEANQRAEQNFQKANFINKGALYYYQ
                     NLLEYFFNSRAMIEKPNYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREA
                     MTFSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSL
                     SDVVSKALFANLSENSFFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQ
                     KAEAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMI
                     VIVPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKE
                     FEKNISYKS"
     gene            6458..7816
                     /locus_tag="SB502_000453"
     CDS             6458..7816
                     /locus_tag="SB502_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEG0433929.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSMLMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWMLFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELNHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPMVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(7830..9014)
                     /locus_tag="SB502_000454"
     CDS             complement(7830..9014)
                     /locus_tag="SB502_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEG0433930.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFSIINAYNETLKIYKDLAKQYRYKIYV
                     IVFDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSRDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKVANQFCNFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDDGYLRVVTLDEKGFECIEIKNQIYK
                     KK"
     gene            complement(9024..9233)
                     /locus_tag="SB502_000455"
     CDS             complement(9024..9233)
                     /locus_tag="SB502_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEG0433931.1"
                     /translation="MAKDTNGIELNTGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            complement(9226..9945)
                     /locus_tag="SB502_000456"
     CDS             complement(9226..9945)
                     /locus_tag="SB502_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEG0433932.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            complement(10017..10583)
                     /gene="purN"
                     /locus_tag="SB502_000457"
     CDS             complement(10017..10583)
                     /gene="purN"
                     /locus_tag="SB502_000457"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEG0433933.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKD
                     AFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDSGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            complement(10574..11944)
                     /locus_tag="SB502_000458"
     CDS             complement(10574..11944)
                     /locus_tag="SB502_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HEG0433934.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            complement(11928..12626)
                     /locus_tag="SB502_000459"
     CDS             complement(11928..12626)
                     /locus_tag="SB502_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEG0433935.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            complement(12628..14133)
                     /locus_tag="SB502_000460"
     CDS             complement(12628..14133)
                     /locus_tag="SB502_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEG0433936.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIEKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFASPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN"
     gene            complement(14130..14657)
                     /locus_tag="SB502_000461"
     CDS             complement(14130..14657)
                     /locus_tag="SB502_000461"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEG0433937.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            complement(14693..15277)
                     /gene="clpP"
                     /locus_tag="SB502_000462"
     CDS             complement(14693..15277)
                     /gene="clpP"
                     /locus_tag="SB502_000462"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEG0433938.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            complement(15277..16611)
                     /locus_tag="SB502_000463"
     CDS             complement(15277..16611)
                     /locus_tag="SB502_000463"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEG0433939.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK"
     gene            16739..17326
                     /gene="folE"
                     /locus_tag="SB502_000464"
     CDS             16739..17326
                     /gene="folE"
                     /locus_tag="SB502_000464"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEG0433940.1"
                     /translation="MFGEKFAKKFEDCVKTILEIIGENPNREGLIKTPNRVFKAYEFL
                     ASGYTQNVKDILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVV
                     GLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGIQKA
                     NSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            17326..18711
                     /gene="fliI"
                     /locus_tag="SB502_000465"
     CDS             17326..18711
                     /gene="fliI"
                     /locus_tag="SB502_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEG0433941.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(18714..20051)
                     /locus_tag="SB502_000466"
     CDS             complement(18714..20051)
                     /locus_tag="SB502_000466"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEG0433942.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYIVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNAEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(20053..20781)
                     /locus_tag="SB502_000467"
     CDS             complement(20053..20781)
                     /locus_tag="SB502_000467"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEG0433943.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLGELFE
                     KSDVIIDFSSPSGTHELLNYARTIPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            complement(20844..22025)
                     /locus_tag="SB502_000468"
     CDS             complement(20844..22025)
                     /locus_tag="SB502_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0433944.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQE
                     KMKFSIDKEAKDFLLKSADARAMLNLLEFVLVLNEKHISLENLKKLRNTINSEGVSSK
                     DTHYILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDIGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHK
                     A"
     gene            complement(22025..>23083)
                     /locus_tag="SB502_000469"
     CDS             complement(22025..>23083)
                     /locus_tag="SB502_000469"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433945.1"
                     /translation="YTNELLFNKFIKNSNPDYTITDIYFKKGFLTSKGSFTLNHSHTQ
                     LSTKIDLKFNNYFLLNKIIKGNFTNPFDFLDKVLKNNKLGTFTLKLHDNNSKIFLNIK
                     DINLSNEGGDTIINGGYIEALMNKNLEIKNIKIHFDMINFSQFYTKFVLQNLNYEQFF
                     NNPVQFYELNLFSKSQQQINFDYLVLDNNKINSFYSKNLVNFNEENSTINLNIQGKSN
                     EIDIDLKSLLGQNLNFDKTKFNITINKFLNSNFNISHFIQKNLDLEIQNLILEKNKQN
                     ISLQGNLNINNSYQAKLQVISSDEPDEIFPWTKDYGGLNQYFLKENNNFFLNLSYDSL
                     ANPQLKINGSEFSNMDLN"
BASE COUNT         7755 a         3613 c         3416 g         8299 t
ORIGIN      
        1 atttaagagt atttttatat ataaaatatt aatattcaat atcaaaaata aaccactaag
       61 aaagtaacaa taataatgaa attttatact attttaagca ttctatttat aagctttatg
      121 ttgagcgctt gtgctgtttt gcaaaaatca tctccacttc aagaaaataa agatttttat
      181 atacttgata cgcatactca aaaaaagatt tcttttgaag atatgatttt agaattgcta
      241 aaagcagatg tgatactgct tggcgaaaaa cacgatgagg ttaaacataa gataagtcaa
      301 gttatgattt ttaatgcctt agaaggaaat ttaagttctc aaaatataaa ctttgatgta
      361 gctttagaaa tgttagcaag cacagagcaa aatcacttag ataaagcttt taaaaataaa
      421 aaaaccatta aagccaatga acttactaat gcattaaatt gggataaggt ctggaaatgg
      481 aaagattatg agcaatttgt caatgtggtt ttttattcaa agtcaaaaat attgggtgta
      541 aatctttcac gctcagaaat tacaagtatt tataatgggg ctcagccctt aaagggttat
      601 gtttcaacca caaatgaagt aaaaaaacaa ctttttgaca ttatatcctt aagccataag
      661 ctaaatcctg aagaaaataa agaattacta gataaattgg tggaaattca acaattcaaa
      721 gacaggcgta tggctgatgt attggttcat catgtaaata aagttttatt gctagctgga
      781 agctatcata caagtaaaaa aataggaatt cctttacata tacaagattt taaaagcagt
      841 aaaaaaatag ttgtagtgaa tttaagctat ggagaaatag atttaaaaga cagtgattat
      901 gttttgattt ataaggggga ggaatgaaaa aattaagttt attttgtgct gtaggtttat
      961 gttttgctag ttttgctttt tctgaagaat tagaatttga tagtcttgaa atttcaggtt
     1021 caaaaatcaa aaacgatgaa aaaccttttg taacttctgg agcaacaagc acaagagagg
     1081 gtataggttc agatacacaa agtatagatt ctatagtgcg tagtatacct ggaacctaca
     1141 caaacacaga tcaagctcaa ggtacagttc aagtaaatat tcgtggtatg agtggttttg
     1201 ggcgtgttaa taccatgatt gacggtgtta ctcaaacttt ttatggtagt gcatcagatg
     1261 atccagctag atttcattca caaacgggaa cttcagcttt tggagctgtt attgatacaa
     1321 atttcttaat cggagttgat gttacaaggg gaacttttga aggagtaggt ggagcaaatg
     1381 ccttgatggg atcagcaaat tttaagacca taggtataaa tgatattgta catgatggca
     1441 atatctttgg atttttagga cgattttctt atggaagcaa tggaatcgga ccaagttata
     1501 tgagtgcagt ggctggaaag actgaacttg aaaataatgg atatgtgggc gcgctttttg
     1561 gttatagcgc aaagagaatt actcaaaatt acactgtagg cgggggtggc aagataggta
     1621 gtagtatggt tgatactgat ggagatggta tagctgatac caatatcgct ccttttgatc
     1681 cagatttttt aacccaaaaa ccaaactctc aactttttaa actcgaatat gtcccaaatt
     1741 cttttacaaa cactatattt tcttatcgta gatatcaaaa cgaacttgcc ggtagaaaaa
     1801 tacacaatga caattatcaa cttgattttt ggcacaaccc taatgagtgg cttaatgtaa
     1861 atacgcttat tgcctacaat caaggcatac aaacctatgg atcaaaatct acttttgcgg
     1921 caaacgatgc catagctaac acaaaggcaa aaaatactgc cactactttt gatataagtg
     1981 atactttaga gggtgaatgg catggattta atctaaacac acgctttgga gcaaatattt
     2041 tgcttaatga ttataaaaat accttaaata catcaattca aggagtaaat tctatacctt
     2101 ttcagcctcg tggaaaacaa aatcttttta cttattatct tgataatagt ctaaattatg
     2161 gtatctttac acttgatact aatgtgaatc ttttagattg gaatatcaaa ggacacagac
     2221 ctgcttgcga tgaagtaaat tttatgtgtt ttccaaaagc ggcgacagat atagataaaa
     2281 atggacttcg cctgaatgct tctgtcatgc tttcagctgc catacacgag ctttttacac
     2341 cctttgtaag ttttgcgaga acaaatagag cccctaatgt gcaagaaatg ttttctcaaa
     2401 taacgaaggc aatggtatca atcctttctt aaaaccagaa caagccaata cttggcaaat
     2461 aggttttaat tcttttaaac atggactttt aaaagatgat gatcgctttg gttttaaagc
     2521 cgtgtattat catacaaaaa taaaagatta tatttataat gaacaatttt atcttgaaga
     2581 tccaagtaaa attcctccaa gctcgcaatt ttatatgcac ttaaattcag ctgatgatac
     2641 tatatttaag ggtgtggagt tagaattaag ctatgacttg ggttttgctt atgctaaagc
     2701 tatgtattca agacaagata caagttcgac tatttctcaa acttcaggac ctcttcttgg
     2761 ctctttttcg gcaagtaaaa tcatggagct tccaaaagat tatgcaaatg tagagcttgg
     2821 ctttagacta aatgacaaaa taagctttgg tggtatagca aaatacacag gcaaagcaaa
     2881 aagggtaaat ccaaatacag atgattggaa taaggatcca aacaatcctt attatcctaa
     2941 accaaccaca caagacttac caaaaattcc tattatagta gatttatatt ggaatataga
     3001 atggtttaaa aacctcacaa tgagagcaga ggtgcaaaat ttatttgata aaaactacat
     3061 ggatgcctta aatgcttata attccttaga taatcagctt caatataatg gagcaggtga
     3121 tcctatctat ctttttagca attctgctcg cggtcgtact tttatagtaa gttttgaata
     3181 taaatattaa ggaatataca aatgttaaaa aaaatgtttt tattttgttt tttattgtta
     3241 aatttaaatg cagaagtaaa tgcaacagat acaaatttat cttttgattc tcccaagata
     3301 gaaaccgaag cacctaaaat agagttttct ctttctagtc tttatcaaaa tgctgatgag
     3361 gtggtaaaag gtgttattta tatattggtt ttattttcca ttttagcatg gacagttttt
     3421 atttctaagc ttatgcaatt ttattttatg aagaaaaatc tagacttgtc tatacaaaag
     3481 ataaaagaat taaaaaatct caatgaatta gatcagacaa aggattttgc aggtgtttta
     3541 tctttagaaa ttcaagatga gcttgaaaaa agtgaatata aaaatgatca tataaaagag
     3601 cgcatggaat tgcgtttgca aaataccatc tcaaagcaaa tcacagcaag taaaaatggc
     3661 ttgagcttgc ttgcgagtat aggtgctagc gcacctttta tagggctttt tggaacagtt
     3721 tggggaatta tgaatgcttt tataggtata gcaaatcttg gcaatgcttc tttggcagtc
     3781 gttgcgcctg gtatagctga agccttgttt gctacagctt ttggcttgat agctgctatc
     3841 cctgcggtgc ttttttataa ttatcttaca agaaaaaatt taaaacttat gcaccattta
     3901 gatgagcttg caaattttgt ctatatactt tttcatagga gttattttaa tgataaaaac
     3961 tgaaatggct cacaaagaag aggagttaag tgagatcaat ataactcctt ttatagatat
     4021 tatgcttgta ttattgattg tttttatggc tgttactcct cttatcacaa gttctatcaa
     4081 aatagaatta cccaagagtt cgcagcaagc agaggataag cttaaaaatc ccatcatact
     4141 ttatttaaat actgataata ctttggctat taatgatgat aaattaagcc tagaaaatct
     4201 ttcaagtgct ttagatataa aaaccaaagg caataaagaa gaaattattt attttcatat
     4261 cgataaaagt gtaaagtatg aagatattat gcaagtaatg caaaaattaa aagagaatgg
     4321 ctatggaaaa atagctcttt caagtaaaaa gatggattag tatgaagtct agtgtgattt
     4381 ttgggtttgt gttaagtttg atattgcata ctttagtatt aatgttttcc cttttttctt
     4441 tttatattca agaaaaatca agtggtgttg attttaaaca aggagcggaa tttacttcca
     4501 ttatgatggt atcagagcct cctatcgggg aattaaaaga agtttcgatt gatcaaaaaa
     4561 agagtaattc tcaagataaa aacaaaaaac aagacgaaag aataagtctt aattctcaag
     4621 ataaaaatgc tgtattaaaa gttcaaaaaa agattgaaaa gcaagatgaa aaccaagctc
     4681 aaaaagaaat agctaatgca agtgaaaatt caaaatttaa aaatgaatcg ctcagtgctc
     4741 cgctacaaag taatgaagat aaaacacaaa ctatagtaag tggcaatgcc aaagaacaag
     4801 ttaaaagcta tcaagctttg cttatggctc atttgactaa atttaaaaaa tatcctcaag
     4861 aagcgataat gcaaaaacaa gaaggcgttg taagaattcg cgtaagcatt gatgaaagcg
     4921 gaaatgtctt aagcaaagag cttaaaaaat cttgccctta tgcagcgctt aatgatgaag
     4981 ctttaagttt atttaaaaga gcttctccat tgccaaaacc gcctaaagaa atgttaaaaa
     5041 atggtgataa aatcagtttt gttatgccta ttgattacaa tattaaagac tatttaggta
     5101 aaaaataaac ttttcattaa aaaaagttta ttagaatttt tattttaaag gtgatgatta
     5161 tgttctcttc gttttttaaa agtaaaaaat gggctttatg ggcttatttg ggactttttt
     5221 tactgttatt tttcttatat atacaaacaa gcttaaatgt tgcgatcaat tcatggtata
     5281 gtgattttta caatgtttta caaaagccaa aaatagaact tttggattct aattctacgc
     5341 aaaaaataga agaaaatctt gaaaataatg ccactttaat ccaagaggct aatcaaagag
     5401 ctgagcaaaa tttccaaaaa gctaatttta tcaataaagg cgcattgtat tattatcaaa
     5461 atttattaga atattttttc aactctaggg ctatgattga aaagccaaat tattcagcaa
     5521 gtgattttta tgctttgatt ttagtttttt tggctattgc tattccttat gttttaatcg
     5581 ctacaattaa tatctatttt gctagcgtct atgcttttaa gtggcgtgag gctatgactt
     5641 tttcttattt aaaattttgg aaaaataaag atgataatat agaaggaagt tcgcaaagaa
     5701 ttcaagaaga tacttataat ttttctaaaa tcgtagagag tttaggactt agttttataa
     5761 aagctttgat gacccttgta gcatttattc cgattttatg gagtttaagt gatgttgtga
     5821 gtaaagcttt atttgcaaat ttaagcgaaa attctttttt ttatttttta aaaaacattg
     5881 atggtttgct tgtttatatt gcacttttga tttctttagg aggcttggtt gtgtcatggt
     5941 ttgtaggtat taagcttcct ggacttgaat ataacaatca aaaagctgaa gcagctttta
     6001 gaaaagagct tgtttatgct gaggataatc gcaaagaata cgctaaaaat gagactatga
     6061 tagagctttt tacagggctt aaatttaact ataaaagact ttttttacat tatggatatt
     6121 ttaatatttg gctcatttta tttgagcaaa tgatagttat agtgccattt ttaatcatgg
     6181 caccagggct ttttgctgga gctataggac ttggtattgt aatgcagatt aataatgcat
     6241 ttgatcaagt gcgaagctct tttagtgttt ttatcacaaa ctggacaact atcactcaac
     6301 ttagaagtat atataagcgt ttaaaagaat ttgagaaaaa tatttcttat aagtcttagt
     6361 tttttcttat aaaatgcaag aaaaaattca aatattaaat ttacttttaa ttgtgtataa
     6421 taaggtttaa taatatttta tttcttaagg agcttcattg gaccccagtc aggttttgga
     6481 tttaaaccaa acttctacag catcttttga tgcaggatat tctatgctta tggttgttgt
     6541 tgcacttgct ctagtgtttt taaatggttt ttttgttttg tctgaattta gtattgttaa
     6601 agtacgtcgt tccaagcttg aagagatggt aaaagaaaaa aaagctggtg ccaagaaagc
     6661 tttggaggtt acttcaaggc ttgatacgta tcttagtgct tgtcaattag gaattacttt
     6721 aagttctcta gctcttggtt ggataggtga gcctgctatt gcaaaaatgc tagaaattcc
     6781 gcttattaat cttggtttta gcactgttat tatccatact atagctttca ttattgcttt
     6841 tagcattatt actcttttac atgtggtttt aggagaactt gtgccaaaaa gtatagctat
     6901 tgcagttgca gataaagcgg ttttatttat agctagaccg cttcattggt tttggatgct
     6961 ctttttgcct tgtattaaaa ttttcgattt tttagcagct ataagtttga aactttttgg
     7021 aataaaacct gctaaagaaa gcgagctaac tcatagcgaa gaagaaatta aaatcatagc
     7081 aagtgagagt caaaaaggtg gagttttaga tgaatttgaa acagagatca tacgcaatgc
     7141 tgttgatttt tcagatactg ttgctaaaga gattatgact cctagaaaag atatgatttg
     7201 tctaaataaa caaaaaagtt acgaagaaaa tatgcaaatc atttgtgagc ataaacatac
     7261 tcgctttcct tatattgatg gttctaaaga tactatttta ggtatgatac acatacgaga
     7321 tataatacaa aatgaattaa accataaaag tcaaaattta gatacttttg ttaaaccttt
     7381 gattttggtt cctgaaaata tcagcatttc aaaagtactt gtaatgatga ataaagaacg
     7441 ctctcatact gcattagtag ttgatgagta tggtggaact gctggaattt taaccatgga
     7501 agatattatg gaagaaatta ttggcgaaat taaaagcgag catgaagaag acagctataa
     7561 aaaacttgct gaaaatatct atgaatttca aggacgatgc gatatagaaa ctgttgaaga
     7621 aatgcttgta ataaactatg atgaggattt agaacaagtt actataggtg gttatgtatt
     7681 taatctttta ggacgcttgc ctatggtagg agatcgcatt gaagatgaac tttgttacta
     7741 tgaagttaaa aaaatggatg ggaattctat agagcgtgtt aaggtggtta aaaaaacaaa
     7801 taaagatgaa gaataagcct ctttaggctt tatttctttt tgtaaatttg gtttttaatt
     7861 tctatacact caaaaccttt ttcatctagt gtaactacgc gtaaatatcc atcatcatct
     7921 attttaccct cgcataaaaa tactcttttg gctattttca taggaagttt ttctttattt
     7981 ctgtgtccaa agatttgata aagattgtcc gaggtgaaat tacaaaattg atttgctact
     8041 ttttgactgt cttcatatcc acctacacca taaataaagt catggcttgg tataaaactt
     8101 attttttcag gtttggaggg tataaaattt actcctccat gtgaacaaaa tatgaattta
     8161 ttttggaatt tgtagtataa acattctttt agatgaggat agagttttct agcatctctt
     8221 ggagtaagtt tttcttttct aaaatccttt aaagtatttt cattaaattc tttggaattt
     8281 gacaattctc cattagccca ttttataaga tgtctttcgt gatttccttc taataagcat
     8341 acgttttctt tttcgcaaat ttttaaaaga aattttatta ctttgccatt ttctatacct
     8401 ctgttgatat aatctcccaa aaatatataa aattcatctt ctttgattgt tttaatgtat
     8461 tcttttaaaa cactatagca accttgtaaa tctcctatat gatgaatttt tttgtatttg
     8521 cttaaatttg gcatttggta aagacatttt ttccagtctc ttgagtctaa aattgggtat
     8581 ttttttggat tttttttgag caaatcttga gttttttcca aaagagcata aggaatgata
     8641 tatccatttt ttttagcttc taaaagattt ttttcttgac attgttttaa agagctatca
     8701 aaaacaataa catatatttt atagcgatat tgtttagcta agtctttata aatttttaat
     8761 gtttcgttgt aagcgtttat gatgctaaac tcaccttttt gcatacgcat ttctagaagt
     8821 ttgagtaaaa ttttactcaa atcttcatca tttttaacat ttaaaatttt atattcactg
     8881 actatatttt taacgcttcc tgataaaaga cgcaaagcat ttaaatcaag tgtataattt
     8941 tgaagtttat tatttttgat aaattcttct tgtcctgcgt aataattccc tcttaaaaca
     9001 agtaagattc gcacattctt tgcctagatt ttctttaaaa attcagtttt taaaacaata
     9061 acgccaaatt tatctactct agcctcaatt tcaccttctt tagaagtgag cttaatattt
     9121 tttatagtag ttccacgttt taaagttgta cttgcacctt taaccttaag atcttttatt
     9181 acactcacgc tatcacctgt gttaagttct attccattag tgtctttagc catttttttc
     9241 ctttctttga tctaaaatat ttaaaatttg caccactaaa gcaaaagcca tagcggtata
     9301 aatatatgcc ttatcaatat gaatatcaaa actttcagca actaaaacta cgcctattag
     9361 caccaaaaaa gctaaggcta aaattttaat gcttggatat ttttcaacaa aatctgctat
     9421 aggtttagaa gcaaaaagca tcacagctac tgcgataata acagcgataa tcatgatggt
     9481 tacatcttga gcaattccta ctgcggtaat aacactatca agcgaaaaca ctatgtcaat
     9541 cacagcaatt tcagctacaa ctatccaaag tttattgctt gctttaaaat gactttgact
     9601 ttcttcttga tgagaaattt gctctttaat ttctttaata gactttacaa tcaagaaaag
     9661 cccacctagt aaaagaacta gatctcttcc tgaaatttca ttgcccaata cactaaacaa
     9721 aggtgttaca agtttcatta cccaaaaaag agataaaaga agtaaaattc ttgtaatcat
     9781 tgcaaaagct aaacctaaga tacgtccttt atcacgatgt tcagggggta gtttgcttac
     9841 taaaatagct aaaaaaatga tattatctat ccctagtaca atttcaagag cacttaaagt
     9901 agctaaagta atccaagcat caatactaaa tatccattca aacataaatt tccttgaaaa
     9961 ttttaaaatt ttttaaagcg atattttata gttttaaagc aaataccttt aattctttaa
    10021 gaaaaaattt caatcacact taagggtaaa atttcatgtt ctagactatg aattttttct
    10081 tcaaattctt caaaactcaa atttcttttt tcaaaagctt tttgagctat aatcattcca
    10141 ctatcaagtt cttcactgac ccaatgcaca ctgactccag ccactttcat atcactttca
    10201 taactttctt taatcgcatg tgctccttta aaaaggggta ataaagaagg atgaaggtta
    10261 attgccttaa tattttttgt aaaaacagga cttaaaattc tcataaaacc tgctaataca
    10321 gtaagatttg ctccactttc tttgattttt tgtaccaaaa tcgtatcaaa ttcttcacga
    10381 gtattataag ccttatgatc aacaatgaca gtatcaagac caaatttttt tgctctttgt
    10441 acaccaaaag catctttttt attacaaatg caaagtacta cttcataggt attttcccct
    10501 atggtttttt tatgaagttt ttctaaaata ttttctaaat tacttccatt tccactaaaa
    10561 agtacagcta attttacaag cattttaatc ctttgataag ttttaaagcg tcaaagctat
    10621 ttttattaaa tttatatttt tttgcaacaa gtccatgagc taaagtagca ttttttgctg
    10681 cttctaaagc actaaaacca aaacctaaat gtgcagcaat cattccactt aaaacatctc
    10741 cactcccacc tttagctaag gcttgatttc ctaaatttac aacaaataat ttttcttttt
    10801 gcacaataat aggatttgct ccttttaaaa caagaacaca atcataattt tgtgaaaatt
    10861 ttctagcata gaaaaagcga tttttttgca atgtttctat atctaaattc tcatcaaagc
    10921 acattttata aagttttata aattcttttg gatgaggggt tataacaaca tcttttctgt
    10981 ttaaatacca aagcaaagct tcacttaaaa agcagtttgc atccaagatc aaaggagtgt
    11041 tttgcaaaat ttcatctttt agaaaatcca aattttcaag ccccatacct aaagcaatag
    11101 cacttgcatt attttcaatt ttttctttta acatcaaaag aggcgagaaa cttttttgtg
    11161 ctactaaaga aacaagacct gctccaaaat ttaaggctcc aagtcctgct aaagttccag
    11221 cacttgcatt ggcaactata taaatatggc caaaatttcc tttattggcg ttgatttttc
    11281 tatctatagt ttttaaatct tttttttcaa gcaaaaaagc ttgagaatta gggtaaaatt
    11341 tcttagatct aatgcctaaa ttggctattt taatccttcc tacaaattcc ttagcaaaat
    11401 cttcaagtaa aatttccttt aaagctccca tacaaaatgt aatatcagct ttaaaacaag
    11461 gataaaatcc caaatttgta ggtatatcac aagctatttt taaagcctta ctttgattaa
    11521 ctttttgaat aattaaactt gttttttcat ctaaacaacg atttgaacct gtacctaaaa
    11581 tacaatcaat gataatatga aattttttaa aattgggttc ttttttacaa aatttaaaag
    11641 cataattttg taaaatttgc tcttgttttt taaaaagcgt attttcttta aagcctattt
    11701 tataagcttt agcgtgtttt aaatttctta aagccaccaa gccatctgaa gcgttgttac
    11761 ccccgcctaa taaaaaaagt atttttactt ttctaatctt gcgttgaatg cgaatttttt
    11821 tagcttcttt tttaatcagt ttagctaaat ttaatcccgc attttccatt aaaataagtt
    11881 catctaagcc tttatttata gcattttgtt ctaaaatttt tatattatca ataatagctt
    11941 tcataatctt ttttcaccaa aaaatatata tttttttctc tttcttcttc aaattttttc
    12001 attttgggta aaaatttctg gatcaaagca cgaaaattct taaaaccata attttgcgga
    12061 tgaaaatccg agtatttgcg gttcatatta gtacggattt gtgcgtattc ggcacgccct
    12121 ttttcatcga taagttgttc ggtgatattg attaaagctc ttaaataatc cttacttaaa
    12181 atatcttctt ttttactctc atctttatct aaataaaaaa attcactaaa agcatttaca
    12241 taggatttta tagatttttc aagccccatt cctataactt gttttttatt ttcccttaat
    12301 ttttgaatga gtgaagtata atcactatcg cttgaaacaa taacaaaaat atctatgttt
    12361 ttttcataaa atatggacat gatttcagtg attaaataca tatcgcttga gtttttgttg
    12421 gctgcaaaat taaattgttg catagcgatt aaagaatatt cagcaatttg ctctctccaa
    12481 ccttgtatat ttttttgagt ccagtctcca taaatgcgtt taataataac ctctccgtaa
    12541 tctgaagcaa tatcaaaaat acttttagcg tattttgcag ggatattttc tgcatctata
    12601 aagatagcta tacttttatt ttccatttta attccttgct ctaaagctta aagcttctaa
    12661 aatatgggtt ttgttaatat taagactttg ttctaaatcc gctatacttc ttgaaacttt
    12721 taaaatttta ttaagcgatc gcaaagaaag attataacgt gaaattgcta aatctagcgt
    12781 atctttggca tctttttcca atacacaaaa acgacttaaa tcttcatctt ttaatttccc
    12841 attaaattct ttttgccccc gttttttact aaaaataaaa gcttgtaaaa ttttttcact
    12901 catttcttta gaacttatac tcgttttatc atccttgctg atctcatcca tagctacata
    12961 aagatcaatc ctatccataa taggagctga aatgtgattt ttgtattttt taatctcatt
    13021 ttcactacaa acacaagaaa gatttttaga aaataaattt ccacaaggac aaggattttg
    13081 ggcagctata aagctaaatt ttgtttcata agtgatttta gaatttactc ttgaaatatg
    13141 aattttatga tcctctaaag gctctcttaa actctctatg atttgcttat taaaatgtgg
    13201 aaattcatca aaaaataata ctccaccatt tgcaagtgcg acttctccaa ttctagcatt
    13261 ttttgttcct ccgccaaaaa tacttgctct tgtagaagta tgatgaggat gacgaaaagc
    13321 acgaatttta gtaaattcac aatcttttga atctaaagac atataagcat tttgcattaa
    13381 aatttcactt aaactttgag gaggcatgat ataaacaagg cgtttagcac acatactttt
    13441 accacttcct ggacttcctt caaataagat attatgcata cctaaagcag ctatcataca
    13501 agctctttta gctttttcct gccctttgat atctttaaaa tcaagtttaa aatccatatt
    13561 ttgtaaaaaa atttcatttt ctatttgtaa aggacttgcg aataaaggat gattgtgaga
    13621 aaaacgaaaa ttttcataat ttttttcttt aaaaaactct attgcttcat ttaaattttc
    13681 aagtccataa acctctaaat ttggtatcat ggaagctttt tgtgctatac tttttggaac
    13741 aacgatttta gctttttcaa ttttagcaga gagaaacaaa agcaaagaaa aaagctcatt
    13801 tgtgctttta atacttccat caagtcctaa ttctcctact acaaaaaagt catctaattc
    13861 ttcattttgc aaaaggatta ataaagcgat agccaaatca aaatgtgatc ccttttttgg
    13921 gatgcctgaa ggactaagat tgatagtgat ttttttagca ggaaaagcaa aatcacaact
    13981 taaaagtgtg gctttgatgc gttcgacact ttccttaatc gctgtacttg caagccctac
    14041 tatgcttaaa tttggcaaac ctcttgtaaa agtggattct acctctataa tgtctaagcc
    14101 ttcatgaaag cttatgcact ttagtttttt catttctctt ttttatgatt tttcttcttt
    14161 ttcttaaatt ctttatcgaa tttttgacgc ttagcaaagg aaattttttc tataaataaa
    14221 tgtccattta aatgatcatt ttcgtgttga atagccacag ctaaaaaacc ttttgcttca
    14281 agttctttaa attctccaaa gcgatcttga tatttaagca agatatgatt atagcgtttc
    14341 acttcttcaa aaaaatctgg cacactcaaa cacccttctg tgcaagtgat catttcttca
    14401 tctaaaggaa taatttcagg attgataatc tctagcaaat cttctttttt ttgttcatcg
    14461 ttttcatcaa aaatatttac aagtaaaaca cgcaaaggaa tatccacttg aatagctgct
    14521 aaacctactc cattacttgc tatcatagtt tcatacatat catcaagcaa ggtgtgaagt
    14581 tctgtatcaa atttatttac aatttcagag tttaaaaaaa gtctaggatt gggataggtg
    14641 ataatttttc taaccattaa aaaacctttg ttttaaatga tctccaaaga aatcatttaa
    14701 aacttttttc caaaacctta tcaatcagcc catattcttt agcttcttgt gctgacatga
    14761 aaaaatctct ttctgtatct tttgctattt ttgcaacttt ttgcttagta ttttttgcca
    14821 aaatatcatt aagtatagtt ttgagtctta aaatttcttt ggcttgaatt tcaatatctg
    14881 tggcttgacc tctagctcca cctaaaggtt gatgaatcat aatgcgtgaa ttaggcaaag
    14941 caaaacgttt tccttctgcg ccacaactaa gcaaaaatgc tcccatagaa gcagcttgtc
    15001 ctatgcaaat cgtacaaaca tcaggtttga tatagttcat agtatcataa atactaaaac
    15061 cacttgtaat tacaccacct ggagaattga tataaagata aatatctttt gtaggatctt
    15121 cagcttctaa aaaaagaagt tgtgctacga tagaagcggc aagttcatca tgaatttcac
    15181 cacttagcat aataattcta tcttttaaaa ggcgtgaata aatgtcataa cttctttcac
    15241 cacgactaga tttttcaata acataaggaa taaacattat ttatcttctt tctctttttt
    15301 gctcactttt tccgattttt ctgtttttgg tataaaaata tcattaaaaa gtttttcttc
    15361 aattaaagcc attttcacag caggcaaagc tccttgtttt ttatagtttt ctaaatgctc
    15421 ttttggattc ataccatagc gatatgcttc aaaataaatc gcttgaatca attcttgatc
    15481 atttacttca atcttacgca attttgcaag ttcatcaatg ataaaagtaa gttttacact
    15541 tttttgtgct tcttctttaa aagaatcacg tttttcttga tatttttctt tacttgcttt
    15601 aagctcttca atttcttttt cgctaaaagt attaaaagcc gcacgcatct gcatatcagt
    15661 ttcttgttct actatgcctt taggtaaatc aaaattatat ttttcaatca aagcatctgc
    15721 aaatttgcct tttaattcat catttacaag tttgaaaagt ttttcatttt tgatttgctc
    15781 ttttaatttt tcatctaaaa cttcaacact agctttttct tctcctggta aaagtttttt
    15841 aagcatttca tcatcaagtt ctggaatttt aagctcttga atttcatgta gttttacttt
    15901 aaatactgca tctttacccg ctaaatgcgc tgcgccgtat tctttaggga aagttacttt
    15961 gatatctttt tcttcaccta ttttcattcc caccatacca tcttcaaaac ctggaataaa
    16021 ttgcttagaa ccaatttcta aaacataatt ttcagcttta ccaccttcaa aagctttatc
    16081 atctacaaaa ccttcaaaat caaattttgc aaaatcacct tcttttaaag ctctttttgt
    16141 ttttatagct tcaggagtag caaaacgctt taaaagttca tcttttttct catcaatttc
    16201 ttttttactt acttttggag tttgatattc agggatgagt ttttcataac cctcaagttt
    16261 gatttcaggt ttaaaagaaa gtattaattc agcaataatt tctccatctt tacgatcaaa
    16321 tttttcaaaa tatggctcac ctacaagctc tttattttct tttttaagtt cttgtaaagc
    16381 gctatttaca gcggatttaa aaagattttg ttctgcatct tgagtgagct ctctttcata
    16441 tcttttaagt acggcactta caggaacttt tcctggtcta aacccatcca tttttacact
    16501 tttagaagct ttttttgcta aattttctac ttcacttttg atcattcctg aaggaatttt
    16561 tacactagca gtcgcattaa cagaatctag ttgctttgcc tttacttcca tagttttttt
    16621 ccttataaaa taaaatttgc cttcaatgat agcaaatttt tccttattac ttgcataaaa
    16681 ttttaaagta atttatgata aaattgcaat attacattat tattaaaata taaaaaatat
    16741 ttttggagaa aaatttgcaa aaaaatttga agattgtgtt aaaaccatac ttgaaattat
    16801 aggagaaaat ccaaatcgtg aagggcttat taaaacacca aatcgtgttt ttaaagctta
    16861 tgaatttctt gctagtggtt atacgcaaaa tgtcaaagac attttaaatg atgctttatt
    16921 tgaaagctct aataatgaaa tggttttggt gcgtgatata gaattttata gtctttgcga
    16981 acatcatctt ttaccttttt ttgggcgtgc tcatgtagcc tatatcccta ataaaaaagt
    17041 agtaggttta agcaaaattc cacgccttgt agaagtgttt gcaagaagac ttcaaattca
    17101 agaacaactt actgaacaaa tcgcacaagc tttaatggaa aatgttgatg caaaaggtgt
    17161 gggtgtagtc atagaagcaa gacatatgtg tgttgaaatg cgtggaatac aaaaagctaa
    17221 ttccaccact acaacttcag ctttacgtgg aattttctta aaaaatgaaa aaaccagaga
    17281 ggaatttttt tctctcataa actctgctaa acaggtaaga ttttaatgaa tcttgaaaaa
    17341 ctacgctcca aacttggtaa agaaaattta agtgctatct ttggagagat tacaaaaatt
    17401 tctgctacga gtatagaaat tcgtgggctt aaaacagggg ttggagatat agtgaagcta
    17461 gtttccaatg aaaatgaaaa tttaaacact ctagctatgg tcgtagaaat caaggaacaa
    17521 tttagctatt taagcccttt ttcttttata gaaggtttca aaataggcga tcgtgctttc
    17581 ataagtgatg caggtatgca aataggcgtt agcgatgaac ttttaggcag agtagtagat
    17641 ccttttatgc gcccaaaaga tggtaaagga gctatagaag taaccaaata tatgcctata
    17701 atgcgtgcac ctattgatgc catgaaaaga gggcttatag aagaagtttt tcccgtgggt
    17761 gttaaaacca tagacgcgct tttaacttgt ggtgtaggac aaaaacttgg tatttttgca
    17821 ggaagtgggg taggaaaatc cactcttatg ggaatgatag ttaaaaattc caaagctcct
    17881 ataaaagtag tggctctcat aggagaaagg gggcgtgaaa ttcctgaatt tatacaaaaa
    17941 aatttaggcg gaaagctcga tgatacagtg attattgttg ctacaagtga tgatagtgct
    18001 ttgatgcgta aatacggtgc tttttgtgca atgagtgtgg cagaatattt taaagaacaa
    18061 ggtaaagatg tactttttat catggatagt gtaacgcgtt ttgctatggc gcaaagagaa
    18121 ataggactag ctcttgggga gcctcctaca accaaaggtt atccgccaag tgttttaagt
    18181 cttttgcctc aactcatgga aagaacgggt aaagaagaag gtaaaggcac tataacagcc
    18241 ttttttaccg ttttagtgga tggtgatgat atgagcgatc caatcgccga tcaaagtcgt
    18301 tctatcttag atggacacat tgttttaagt cgtgaattaa cagactttgg aatttatcct
    18361 cctattaata tacaaaactc cgcttcaagg gtaatgagcg atattataag tcctgaacac
    18421 aaactttggg caagaaaatt taagcgttta aactcgcttt taaaagaaaa tgaagtattg
    18481 cttcgcatcg gtgcttatca gaaaggaagt gataaagaac ttgatgaagc tatttctaaa
    18541 aaagaattta tgcaaaaatt cttaggacaa aatcctgaag aaagcttcga atttaatcaa
    18601 actttagagc ttttaagtca aattgataca ccaaatactc ctttgccacc aactcaaaat
    18661 ataaatgtag gaagtgcaag tgcaacctta cctaatccta atttaaaata aaattattta
    18721 ataaaataat ctccatcaaa actgattaaa gaatattttc tttcatcgcc tatgctttga
    18781 gttagctctt ctatgcttaa aaaacttagc gtatcagctt ctacatattc acgcacttct
    18841 tcagcatttt tatttgcgct gataagttct tcaaaagttg gagtatctat accataagta
    18901 tcaggaaatt tgatctcagg acaagctatg gcaagatgga ttttactcgc tcctgcagca
    18961 cgaagtaagg aaattatttt tttagaagta gtgccacgca ccaagctatc atcaatgact
    19021 acaatttctt tgccttctaa aactttacgc ataggattaa gctttaattt tacttttaaa
    19081 tttctaagct cttgagttgg ctctataaaa gttcttccta cataatgatt tcttactatt
    19141 gccatttcaa gagggatttg taaatattga gcaaaaccta tagctgcact tactccacta
    19201 tctggcacag gcacgacaaa gtctgcttta taagcaaatt ttttagctaa agcttcgccc
    19261 atttttttac gcacttcata cacgctttta ccttctacta tgctatcagg tctagcaaaa
    19321 taaatgtatt caaaagcgca aattctagga gtttgagaaa aaagttctat gctttcaaat
    19381 ttatcatttc cctgagtaaa aataagcatt tcccctggtt taacatcacg aataaattca
    19441 gcctctataa gatcaaaagc acaagtttca ctagcaacta tatagcctcc atcttttaaa
    19501 cgccctaaag acaaaggacg caccccatga ggatctctta caatataaag tttatctttg
    19561 cttgctaaaa caaaacaata agctcctata cattctttta agctctcaat aaatctatct
    19621 tttagacttt cttgcttact tcttgcgata agatgaacaa cattttctgt gtccatattg
    19681 gtttgaaaaa tagccccatc ttgaataagt cttgatctta cttcttcttt attgactaaa
    19741 tttccattat gcgctaaagc aatatcacct aaaaccgaag tggctgctat gggttgggca
    19801 tcgtttaaac ttgaatttcc tgctgtagaa tagcgattat gccctatagc gatttcacct
    19861 tctaaagttt ttaaattatc gggattaaaa atttgactca cttcaccttt agctttaata
    19921 gtcttaatat ttttaccatt actcacacta ataccacttg cctcttgccc acggtgttgc
    19981 atagcaaaaa gcgcataata cgcataagta ctagcatttt ttgaattaat aactcctaca
    20041 actgcacaca ttttaaattc ctaaaaaatc attgattgaa tacatttttg cttcttgctt
    20101 actaagccaa atagcgattt taatcgcacc tttagcaaaa gtcgcccttg aagtagcggt
    20161 atgattaagt tctaaaaatt ctccatcttc ataaaaacct actgtatgac gtcctactat
    20221 atcgccaccc cttaaactca tcacggcaat ctcatctttg cttctttcac ctataatgcc
    20281 atctcttcca cttactctta ctttttcaag ttctaaattt ctagcttttg ctacactttg
    20341 agctaaagtc atagctgtac cacttggtgc atctttttta tggcgatgat gcatttctaa
    20401 aatttctata tcaaaatttc ttagcatttg actggcttta ctagcaagat agtttaaaac
    20461 cgcaacacct aaagacatat tggtcgcata aaaaatcggc atcacttcac tagcactttg
    20521 catcaaatgt aaaattttct catcaagccc tgttgtacct attaccaaag gtttaggtat
    20581 agttcttgca taatttaaaa gctcatgagt tccacttggg gaagaaaaat caataatcac
    20641 atcgcttttt tcaaaaagct ctcctaaatt tccaccctta tcataaagta tcgaaatttg
    20701 tgcttgtgtt tcgcttttta aacattcttc aatctgtttt cccattcgtc ctttagcgcc
    20761 ataaattcct attttaatca tctttttcct tgaaaataaa atattgattt tagcatttat
    20821 tttgtaaatt ttaaataata aaattaagct ttatggtttt ttaatttata taaattatct
    20881 aacaattttg cttcttctcc taagcccttg ctatgataaa attttaaatt tttactaaga
    20941 tatttttgct ctacccagcc accaaaatca tgtggataaa gatagttttg tttttcttga
    21001 tgattgttgt taagataatt aggtatttct aaagcttcat tattttttac atagtttaaa
    21061 gcttcattga tagctttgta gcttgcatta gatttgattg tgcttgctaa ataaactacg
    21121 cattgggcta ggataattct tgcttcagga taacctatat ttttaacagc ctctagagtc
    21181 gaaaccgcta aatttaaagc atttggatcg gcatttccga tatcttcact tgaaaaaatc
    21241 accaaacgcc tagcgataaa atccgcactt tctcctgcat caataagtct tgcaagataa
    21301 taaatagctg catcaacgtc acttccgcgt aaacttttta tcattgcact tgctaaaata
    21361 taatgtgtat cttttgagct aacaccttca ctatttatgg tgttgcgaag ttttttaaga
    21421 ttttcaagac tgatatgttt ttcatttaaa accaagacaa attcaagcaa atttagcata
    21481 gctcttgcat cagcactttt cagtagaaaa tctttagctt ctttatcaat actaaatttc
    21541 attttttctt gtacacgcaa gagtaaagtt tcaagttcct ttacccctaa agatttaaat
    21601 tcaaaaagca tggaacgact tcttatacca gaacttagaa caaaataggg attttcagtg
    21661 cttgcgccga ttaaaattaa acggtaattt tccataggaa ttaaaagcat ttcttgttgg
    21721 gttttgctaa ggcggtgaat ttcatcaata aaaattaaag gcttataaag actattttta
    21781 taattatcta aaatttttct tagttcttcg agtttaaaat ttcctccatc aaattcataa
    21841 aaatctaagc caaattcttt ggctacaact ctagcaaaag ttgtttttcc agaacctgcc
    21901 gttccaaaaa aaatactatg aggaagtttt tgtaaagcag taaatttttt gaaaatttct
    21961 ataagctcat attgtcctaa aatatcatca aaattttcag ggcgaaaggt caaagctagg
    22021 ctcattaatt taaatccata tttgaaaatt cactaccatt aatttttagt tgaggattgg
    22081 ctaagctatc ataagataaa tttagaaaaa agttattatt ttcttttaaa aaatattgat
    22141 ttaaacctcc ataatctttt gtccaaggaa aaatttcatc aggctcatct gaactgataa
    22201 cttgtaattt tgcttgataa gagttgttaa tatttaaatt gccttgtaga ctgatatttt
    22261 gtttattttt ttcaagaatt aaattttgta tttctagatc aagatttttt tgaataaaat
    22321 gagagatatt gaaatttgag ttaagaaatt tatttatggt tatattaaat tttgttttgt
    22381 caaaatttaa attctgaccc aataaagatt taagatcaat atcaatttca ttggattttc
    22441 cttgtatgtt taagtttatt gttgaatttt cttcattaaa atttactaga tttttgctat
    22501 aaaaagaatt gattttattg ttatctaaca caagataatc aaagttgatt tgttgttggc
    22561 ttttgctaaa taaatttaat tcataaaatt gtacaggatt gttaaaaaat tgttcgtaat
    22621 ttaaattttg caacacaaat ttagtataaa attgagaaaa attaatcata tcaaaatgta
    22681 ttttaatgtt tttaatttct aaatttttat tcattaaagc ttcaatatat ccgccgttta
    22741 tgatggtatc tccaccttca ttgcttaaat ttatatcttt aatatttaga aatattttag
    22801 agttgttatc gtgtaatttg agagtaaaag ttcctaattt attgtttttt aacactttat
    22861 ctaaaaaatc aaaaggattt gtaaaatttc cttttataat tttatttaac aaaaaataat
    22921 tattaaattt aaggtcgatt ttggttgaaa gctgtgtatg agagtgattt aaagtaaaac
    22981 ttcccttaga agttaaaaaa ccttttttga agtaaatatc tgtaattgta taatcaggat
    23041 tgctgttttt aataaattta ttaaataaaa gttcgttagt gta
//
LOCUS       DARATF010000016        23032 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.016, whole genome shotgun sequence.
ACCESSION   DARATF010000016 DARATF010000000
VERSION     DARATF010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23032
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.016"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..187
                     /locus_tag="SB502_000470"
     CDS             <1..187
                     /locus_tag="SB502_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0433946.1"
                     /translation="IKNLNHGMGLSTKLFFKKHLLQILKEPLQDKICKKEVSYKCDEL
                     VYTFKEENHQIILNITN"
     gene            276..1592
                     /locus_tag="SB502_000471"
     CDS             276..1592
                     /locus_tag="SB502_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEG0433947.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMFI
                     GFLMDIVVICGNYYVLHYTKSELFGIGLSNIFARIVAIVALFAILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLVGARYENIAYKHAWRALYFSVIASALVAFLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            1568..2215
                     /locus_tag="SB502_000472"
     CDS             1568..2215
                     /locus_tag="SB502_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEG0433948.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKCIKTLRLRLNEKGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKTRFEKKVLKDDELIFLAKKYQIIFDENAKKIYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLRAIEYVILHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS"
     gene            2257..3777
                     /locus_tag="SB502_000473"
     CDS             2257..3777
                     /locus_tag="SB502_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433949.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYILSKEENTYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGQGFNPCIPEDKEFSRFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFSDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRYKENAFILELSKDDEDILLINKELNLLKLCL
                     PKHSKELYEEIKKDEIGARLLENFSKEFPLLDESFELQNNFYSLLGLVGRVLNLGKNL
                     QESVSELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRV"
     gene            3758..5947
                     /gene="hypF"
                     /locus_tag="SB502_000474"
     CDS             3758..5947
                     /gene="hypF"
                     /locus_tag="SB502_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HEG0433950.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILACAQKECENFIENLKNHLPPLARIDKLIMTQISISNYENFSITPSLENTKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRINTSMQELLMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKINVFLKNPKGEILAKDQEAFMQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFEGSLVATSANLSGESI
                     VKDEFNLCQKLDGVFDFYLDYDREIINASDDSIVQVVNGKTMFLRTSRGLNPFYLERN
                     FNKKATFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKDF
                     LAKIPKIKLKNLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKFFVEKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFIPLKYPCNDSSIALGQMVHFLNLEK"
     gene            6025..6768
                     /gene="hypB"
                     /locus_tag="SB502_000475"
     CDS             6025..6768
                     /gene="hypB"
                     /locus_tag="SB502_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HEG0433951.1"
                     /translation="MCKDCGCSINSSHTHGHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     ALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSITEGSDKPQKYPVMFKKADIVLITKVDLAHHFDFDIKEATRLIKELNP
                     RADIITLDAKNGTNMELWYKVLKLKKELF"
     gene            6768..7049
                     /locus_tag="SB502_000476"
     CDS             6768..7049
                     /locus_tag="SB502_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEG0433952.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            7033..8124
                     /gene="hypD"
                     /locus_tag="SB502_000477"
     CDS             7033..8124
                     /gene="hypD"
                     /locus_tag="SB502_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEG0433953.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTVIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCAVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNA"
     gene            8121..9095
                     /gene="hypE"
                     /locus_tag="SB502_000478"
     CDS             8121..9095
                     /gene="hypE"
                     /locus_tag="SB502_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEG0433954.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEANVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDGLKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            9095..9439
                     /gene="hypA"
                     /locus_tag="SB502_000479"
     CDS             9095..9439
                     /gene="hypA"
                     /locus_tag="SB502_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HEG0433955.1"
                     /translation="MHELSIVESLIELCEENALNNKAYNVQEIYVKIGRLSGVEVDLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDQTSILEENVFKCPKCQSIEYKITQ
                     GGDLHLMRLVME"
     gene            complement(9461..10476)
                     /locus_tag="SB502_000480"
                     /pseudo
     CDS             complement(9461..10476)
                     /locus_tag="SB502_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882548.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
     gene            complement(10482..11450)
                     /locus_tag="SB502_000481"
     CDS             complement(10482..11450)
                     /locus_tag="SB502_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEG0433956.1"
                     /translation="MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKVLVDLCKNNTDNFF
                     LLELYDESSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAASELNKFSDLRVDEKTIEQYCYSLNTGSFESFFDKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFS
                     LKIEQYKEIFTLLLKCEYELKTNSKLVKKEFLISNLLKLARILKIN"
     gene            complement(11443..13377)
                     /locus_tag="SB502_000482"
     CDS             complement(11443..13377)
                     /locus_tag="SB502_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEG0433957.1"
                     /translation="MKEFLNSLSYGISSHEVNNEFKQILRELLTNHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKRANETSLVITKRYGEAVLGMNIKTGLSTTLKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIHDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYKNRMDL
                     RALPFCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPHPLSENICSLKPHLDRLAYCFKITLDHENKVIKEELFEGIINSKRRFN
                     YDEVDKILIQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLTNKAAAKLIDIGVFRNHLSADVRKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALADELNLRAEVDKLIIKAQKKAEYSSVNAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLENVEVQIMEAD
                     IVMAKIYAKITQRLIKEENV"
     gene            13496..14518
                     /gene="ilvC"
                     /locus_tag="SB502_000483"
     CDS             13496..14518
                     /gene="ilvC"
                     /locus_tag="SB502_000483"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEG0433958.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     IIGLREGSVSAVKAKNAGFEVMSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVAPKGIDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIVTEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            14522..15604
                     /locus_tag="SB502_000484"
     CDS             14522..15604
                     /locus_tag="SB502_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEG0433959.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVFSVKP
                     DYFIDKQEDLISSNKDHYEIGIFQENEFDNNKSVSILEQKIQEIDDLNTSLNEQNLSS
                     VEQNLSLEQNQSLEQNFIPKDTNLTQDQNLTFDEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPEIDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTI
                     GNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKGVDLVYLSEIYGK"
     gene            15594..16367
                     /locus_tag="SB502_000485"
     CDS             15594..16367
                     /locus_tag="SB502_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEG0433960.1"
                     /translation="MASEILPDEFLELFQDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVIALSKAVVVAQADIKSGSMQS
                     AKLALELNKPLYVLPQRLGESTGTNFLLKENKAKLICDFKEFVSEFASIDINQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLA"
     gene            16364..16747
                     /gene="ruvX"
                     /locus_tag="SB502_000486"
     CDS             16364..16747
                     /gene="ruvX"
                     /locus_tag="SB502_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEG0433961.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGV
                     ANTRKKDGKLDSLSAFIMIKDYFAL"
     gene            16776..17615
                     /locus_tag="SB502_000487"
     CDS             16776..17615
                     /locus_tag="SB502_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEG0433962.1"
                     /translation="MQNILSSFTQEKNVCVFTNTLKISIEELEKEFLKQKLKFKKINA
                     YCYLFDAKDKAILSSMKAFNEAHFYIQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSI
                     NLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLENVEAKAGQSEEFAEISKCRRILPSLDYDGFFIAKLR
                     KLC"
     gene            complement(17791..18288)
                     /gene="msrA"
                     /locus_tag="SB502_000488"
     CDS             complement(17791..18288)
                     /gene="msrA"
                     /locus_tag="SB502_000488"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEG0433963.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVIDTEVGYSGGNPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPNQGYCQAIIAPKLQ
                     KIQSD"
     gene            complement(18329..18847)
                     /gene="ppa"
                     /locus_tag="SB502_000489"
     CDS             complement(18329..18847)
                     /gene="ppa"
                     /locus_tag="SB502_000489"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEG0433964.1"
                     /translation="MNLNKIKIGDIPNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            complement(18857..19435)
                     /locus_tag="SB502_000490"
     CDS             complement(18857..19435)
                     /locus_tag="SB502_000490"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEG0433965.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVINTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERAIEPIVADMKELIKKIQSI"
     gene            complement(19432..21183)
                     /gene="aspS"
                     /locus_tag="SB502_000491"
     CDS             complement(19432..21183)
                     /gene="aspS"
                     /locus_tag="SB502_000491"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEG0433966.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLITEGTIRPRGEGLVNPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCEQKDVIKVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKKDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELKLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANNIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            21274..22134
                     /locus_tag="SB502_000492"
     CDS             21274..22134
                     /locus_tag="SB502_000492"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEG0433967.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLL
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSIFLEDRQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCMLCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            22134..>23032
                     /locus_tag="SB502_000493"
     CDS             22134..>23032
                     /locus_tag="SB502_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0433968.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIEVDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFVSFLEDFKKDFNAYSQISNE
                     LNAILEEEKKVEELKELARAQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKA
                     ERIFELEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVEALLDRIENLS
                     YLIKRYESIENALEVLKQKKYEL"
BASE COUNT         7890 a         3014 c         3986 g         8142 t
ORIGIN      
        1 tattaaaaat ttaaatcatg gaatgggatt gagcacaaaa ttatttttta aaaaacattt
       61 attgcaaata ttaaaagaac ctttgcaaga taaaatttgc aagaaggaag tctcatataa
      121 atgtgatgag ctagtgtata ctttcaaaga agaaaatcat caaattattt taaatataac
      181 aaattgagta tattaaatgt ttatatttaa aaaagtaatt tttaagtaga attgtttttt
      241 aaaaaaatat ttaaaaaaag agataagata acatcatggc aaaaaaacaa ctctccttaa
      301 caagacttag ttttcctata ttttgggatt tgctttctaa gtatttaacc gtgattatca
      361 ataccgctat ggtgtcgcat tattctaatt ttcttgttgg tgctatgggc gctggaaatc
      421 aaattttaga tctttttatc actatttttt catttttaag tgtgggttgt agtgtggtga
      481 tcgcacaagc aattggtgca aaagatcatg ttttagcaag aaaagtgatt catcaaagtt
      541 tgttcttaaa tgcactttta ggctttgtat gcggtgtgct tattttatgg catggggagt
      601 atttgcttta tcttttaaaa attccacaag aattgctcaa agatagcgaa atttacttac
      661 atatgcttgc aatttgtttg ttttttgatg ccataggtat tgttttagct gctattgtaa
      721 gggtttataa tatggcttat tgggtcatgt ttataggttt tttgatggat atagtggtga
      781 tttgtggaaa ttattatgtt ttgcattata caaagtcaga actttttgga atagggctta
      841 gtaatatttt tgctcgcatt gttgctatag ttgctttgtt tgcgatactt ttttataaac
      901 ttaaaattca tcttaaaatc aaagaaatga taaaacttga aaaagaagtt ttaaaaaagg
      961 ttttaaatat aggaggattt tcagcagggg aaaatctttt gtggatagtc caatatacta
     1021 tagcttttgc ttttgtagca agcttaggtg aggcgagttt gagtgtgcaa acgatttatt
     1081 ttcaaatttc aatgcttatc atgcttatag gacaagctac gagcatagct aatgaaatca
     1141 tagtaggtaa attagtcggt gctagatatg aaaatatcgc ttataaacat gcttggcgtg
     1201 ctttatattt tagtgtaata gcgagtgctt tagtggcgtt tttaaactat ctttgtcaag
     1261 attttactat gcaaatttta gggcttaaag aagagctaaa aaatttaatg atacctttat
     1321 ttgctctttc aatctttctt gaaatttcac gaacttttaa tatagttatg gttaattcct
     1381 tgcgcgcaag tggcgatgct aagtttccat tttttagcgg acttgttttt atgatggggg
     1441 tatctttgcc tgtgggttat gtgctttgtt ttcattttaa tcttggaatt ttaggagttt
     1501 ggataggatt ttgtgcagat gaatttttgc gtggaatggt aaattcatac agatggaaaa
     1561 gtaaaaaatg gcaaggcaaa gctctagttt aaaatcattt atttataaag atgagtgcta
     1621 tttttattct aaaaaatgca taaaaacttt aagattaagg ctaaatgaaa agggtgaatt
     1681 tgttcttagt attccttatt tttgcacctt taaaagtgtt tatgagtttt tagataaatc
     1741 aagttcttgg atgaatgagg caaaaacaag atttgaaaaa aaagttttaa aagatgatga
     1801 gttaatcttt ttagctaaaa aatatcaaat tatttttgat gaaaatgcca aaaaaattta
     1861 ttttgataaa gataaaataa tttgtcaaaa taaagcaaaa ttggatttat ttttaagaca
     1921 aaatgctaaa aagattttta ctttttatct taaaaaatgg agtaaaaaaa caggcttatt
     1981 ttacacgcat ttaagcatta aaaatatgaa aacacgttgg ggttcttgca atcacaataa
     2041 agcttatatt aatttaaatt taaaactcat tcaaaaaagt ttaagagcta ttgaatatgt
     2101 gattttgcat gaaattagcc atttaaaatt tcccaatcat agcaaagaat tttatacttt
     2161 tatagagcat tttatgagtg attttaggca aagagagaaa gaatttttaa gttaaaaatg
     2221 ttatatttat agtttatttt tcaaaaaagg cataatatga ctttggattt tgattttatt
     2281 tataatgcag ataatgatat ttttgaatat ttattgcgtt tttatgcgaa aaattacaat
     2341 tatatcctta gtaaagaaga aaatacttat catttttcta tcgatgcaga tgaagaaaat
     2401 ttaaagactt tttgcgattc tttgaatttc atgagtcata gcgttttttt gaaaaaattt
     2461 gatgtaaaag cggggcaggg ttttaaccct tgtataccag aagataaaga attttcaaga
     2521 ttttcttata ttactcattt aaattctaat gcttatcaag aaaaaaaact tttaaacaaa
     2581 aacgaatggg gcgtgttttg tgagtgtgaa ttttcaagca atttatcaga atttgaaaaa
     2641 atcaatgaag aaaatttcaa tactttttta aatcttgcct ttgatttgtt aagtcaagaa
     2701 aaaaagattt atttgaaaga taaaaatggt atttatgaat tttctttgtt taagaacgaa
     2761 tttataggag attttttact tccttgtgat attaaggcta taaattcagt ttttgtttgt
     2821 tcaaatgaaa atttaaaact tcttgcaagt ttagaaaaac ctttgatgaa gctaaggctt
     2881 aatgctatgt ttagaaaaaa tcacaatctt gattttagtg attttaaaat tagacttgct
     2941 agggatttat tttgttttgc tttaggtttg aaactttttg aaaatgagta taaattttta
     3001 agcgtaaaaa agatagaaga atatcaaaaa gatttttata tcagtgcttt agatgagcaa
     3061 gtggtggttt tggaaggctt tgaatttatc aatgctaagg caagagagct tattttttct
     3121 aaagaagata aaaatatggc aagaatttct tatcttgtaa gccgttataa agaaaatgct
     3181 tttattttag agctaagtaa agatgatgaa gatattttgc ttatcaacaa agagcttaat
     3241 ttacttaaac tttgcttacc aaaacacagc aaagagcttt atgaagagat taaaaaagat
     3301 gaaattggtg caaggctttt agaaaatttt agcaaggaat ttcctctttt agatgaaagt
     3361 tttgaacttc aaaataattt ttattctttg cttgggttag taggtagagt gttaaattta
     3421 ggtaaaaatt tacaagagag tgttagcgag cttttaaaaa tcgctgatga gtcaaaaatg
     3481 cctcgtggag taaagattga ttatcgtttg aaagaagata aaagttttga ttatacaaga
     3541 actttaagat ctgccatgag ttttatgtta gcaggtgtgg atagtgctaa tatcgcttat
     3601 ggagcggttg agagtttggc ttatttcttg cgtgatactt atgatgaatt aagagagaaa
     3661 aagcaaagtg atttagcgct tataagtgga tctttgtttg aacataaatc tttgcttaaa
     3721 aatactttaa aacatcttaa aaattgtcag ttaagcgatg tgccacttag ggtataagat
     3781 caaaatttca ggcttggttc aaggggtggg ttttcgtccc ttagtttatg aactagctct
     3841 gaaatcaaag ctttttggag aggtaagaaa tgatggtttt ggggtagaaa tcatccttgc
     3901 ttgtgctcaa aaagaatgtg aaaatttcat agaaaattta aaaaatcatc ttccaccttt
     3961 agcaagaata gataagctta taatgacgca aatttctatt tcaaactatg agaattttag
     4021 cattactcct tctttagaga atacaaaaag cacgcctatg ttaagtgatt ttgcgctttg
     4081 taaggagtgt aaaaaagaat tttttgatga aaaaaatcca cgctttttat atccttttat
     4141 cacttgcacg cattgtgggc cacgctttag tattataaaa agtcttcctt atgataggat
     4201 taatacttcc atgcaagaat tattgatgtg tgagttttgc aaaagtgaat acgaagatcc
     4261 taaaaatagg cgttttcatg cccagcctat tagttgtcct aaatgcaaaa tcaatgtttt
     4321 tcttaaaaat ccaaagggtg aaattttagc caaagatcaa gaagctttta tgcaaagtgc
     4381 gaagttttta aaggaaggta aaattttagc cataaaaggt atgggtggtt ttcatctcat
     4441 gtgcgatgct tttaatgaag aagctttaaa aactctaaga cttagaaaaa atcgccctaa
     4501 aaaacccttt gctttgatgt gtaaagattt acaaagtgct aaagaacttg cctttataga
     4561 tgaaaaagaa gaagctttgc ttggtggagt tttagctcct attgtgattt taaaggcaaa
     4621 aaaagccttt tctttaattg ctcctgatgt tgataaaata ggtattatgt tagcttatac
     4681 gcctttacat cttttgcttt ttgagtattt tgaaggaagc cttgtggcaa caagtgcaaa
     4741 tttaagtgga gaaagtattg ttaaagatga gtttaatttg tgtcaaaaac ttgatggagt
     4801 ttttgatttt tatttagatt atgatagaga aattatcaat gcaagtgatg atagcatagt
     4861 tcaagtggta aatggtaaaa ctatgttttt gcgtacttca aggggtttaa atccttttta
     4921 tttggaaaga aattttaata aaaaagccac ttttttagct ttgggtgcgg agcttaaaaa
     4981 tgaatttgtg attttttatg aaaataaact tttaatttct ccttatatag gggatttgaa
     5041 aagtcttgat gtgcatgaga gattttttaa acttttagaa ttttttaaac aaaattatga
     5101 tttgaaattt gatgcgattt tgtgcgataa acacccgcat tttagctatg caaaagaatt
     5161 tgaagaaagg attaaaattt ctcatcatta tgcgcatttt tgtgcggctt attttgaata
     5221 cgaagaaaat tttgcaaaag atgaaaaggc tttagctttt atttgtgatg gaacaggtta
     5281 tggcgaagat ggtaaaattt ggggtggaga agtttttgta ggaaatttaa aagaatatga
     5341 aagaattgca cattttgaaa atttcactct tataaatagt gatattaaaa atatacaaaa
     5401 tttagcctta agtcttattt ttcattatga tttagaagat aaggctaagg attttttagc
     5461 aaaaattcca aaaattaaac ttaaaaatct taaaaaaatt tattctcatt ctaacttaca
     5521 aacaagttct ttaggacgca ttatcgatgc ttttggaagt attgttttta acttagaaaa
     5581 aagttcctat gaagctcaag ttggcttaat gtgtgaagct ttttatgata aaaatcttga
     5641 tttttcttat aagttttttg tagaaaaagg gcaggttaat tttaaaaatt taatcctagg
     5701 ggctttgcaa gatgaaaaaa ctaaggcgat tacaggtatg tttaatgcct tggcaaattt
     5761 tatcatagat tttagcaaag attatgattt aaaagtgctt ttaagcggag gggtttttca
     5821 aaacaaaacc ttgcttgaaa ttttaaaagc taaaaatttt gattttttta tacctttaaa
     5881 gtacccttgt aatgatagct ccatagcctt aggacaaatg gtgcattttt taaatttaga
     5941 aaaataaagc aaatattcta aaaactcata attttttaat gcttttaagg ttaaaatgaa
     6001 acaaaaaata tataaggaaa gaaaatgtgt aaagattgcg gctgctctat aaattcaagc
     6061 catacgcatg gtcatcatca cgaccaccat catgaaaatc caagtttaaa agaaagcaaa
     6121 accatagaag tgatttctaa aattttaagc aaaaatgatg aagaagctaa gcacaataga
     6181 gcgcatttta atgaagctaa cacgctttgt attaatttaa tgagttcccc aggtagtgga
     6241 aaaaccacgc ttttagaaag cacgattaag gctttgaaaa atgaacttaa aattgctgtg
     6301 attgaagggg atttagaaac caataatgac gctctaaggg taaaaaatgc cggagctttg
     6361 gcgtatcaaa tcactacagg acaaagctgt catttggacg cttttatggt gcatgaggct
     6421 ttgcatcatt tagccattga tgatgtggat ttgcttttta tagaaaatgt tggaaatttg
     6481 gtttgtcctg caagttatga tttaggagag catttaaatg tggttttgct ttcgataact
     6541 gaaggaagtg ataaaccgca aaaataccct gtgatgttta aaaaggctga tatagtttta
     6601 atcacaaagg tagatttggc ccatcatttt gatttcgata ttaaagaggc gactaggttg
     6661 attaaagaat taaatcctag agcagatatt atcacccttg atgcaaaaaa tggcaccaat
     6721 atggagcttt ggtataaggt gcttaaactt aaaaaggagc ttttttaatg tgtttgtcta
     6781 taccttctga aattttagaa atcgatgagt taaacaatgc tttagtacaa actttaggcg
     6841 tgaaaagaaa agttaatttg gatttgattg atgaaccttt aaaacaaggc gattatgtat
     6901 taatccatgt aggcgttgct atggaaaaaa tcgacaaaga agctgcacta gaaagcatta
     6961 aaacctatca agaaatagta gaaaaaatga atagtggaga gataaaaagt gatgaaggag
     7021 atttgggttt aaatgaattt catcgatgaa tttagagata aagaaagcat tttagcttta
     7081 aaaaaactca tagaacaaga acttaaaaat cctattaata tcatggaaat ttgcggtggg
     7141 catacgcata gtatcatgaa atatgctttg ccttctattt tgccaaagga aattaacttt
     7201 atccatgggc caggatgtcc tgtttgtgtt atgccaagag ttcgcattga tacagttatc
     7261 aagttagcct ccatgaaaga tacgattttt tgtactttag gggatctttt aagggtgcct
     7321 ggaagtgaaa tttctttact ggatttaaga gctaaagggg ctgatgttag agcgctttat
     7381 tctccacttg aggttttgga aattgctaag caaaatttaa acaaaaatat catctttttt
     7441 gctataggtt ttgaaactac tacgcctatg agtgctttac ttcttcaaaa ggttatagaa
     7501 gaaaaaataa ataatgtctt ttttcatatc aatcatatca cagttccagc acctgtagaa
     7561 gcgatcatga atgatgaaaa tgtaaaaatc aatgcttttt taggtccttc tcatgtgagt
     7621 gtgataacag gttatggtat ttatgagcct ttagcagcaa aatttaaaac ccctatagcg
     7681 gtgagtggtt ttgagccagt tgatatttta gaaagtgtgt taaatatcat aaaacaaagc
     7741 aatgaaggca cttttaaagt gtataatcaa tacaaaagag ccgtaagcaa agaaggcaat
     7801 gttaaagcac aaaatttagt aaaaaaatac tttagggtgt gtgattttga atttcgtggc
     7861 ttaggactta ttaaagatgg aggcttggag ttaaaagaag aatttagcgc ttacgatgcg
     7921 agtaaaaaat ttgattgtgc ggtgcaaagt aaaaatgaaa gcaaagcctg tatttgtggg
     7981 caaattttaa gaggtttggc caagccttat gattgtaaag tttttggcaa ggcttgtacg
     8041 ccaagaagtc ctataggaag ttgtatggtt tctggcgagg gtgcttgtgc ggcgtattat
     8101 aaatactcaa aggtgaatgc atgaaaaata tttccttagc ccacggaggc ggtggagaag
     8161 agatgaatga gcttttaact aagcttttta agatctttga taatgaaatt ttaaacgcaa
     8221 ataatgatgc agcgattttg ggaaatttgg ctttaagcac ggattctttt gttttaagtc
     8281 cgattttttt agatgaagag gttaatatag gtaaactttg tgtttgtggt tctattaatg
     8341 atgttttgat ggtgggtgct aagccaaaat atctaagctt agggcttatc ttagaagaag
     8401 gttttgagct agaaaaatta gaacgtattt taaaaagcat taaagaagaa tgtgaaaaat
     8461 gtggagttat gttagtttgt ggcgatacta aagttgttcc taagggtaaa gcagatgaaa
     8521 tttatatcaa cactacagcc ttaggtgaaa ttatttctaa aaaagaaagt aaaaatatca
     8581 aagcagggct tagcatactt ctttcaggtg atataggaag gcatggagct agtgttttaa
     8641 tcaaaagaaa tgagttagaa gctaatgtta aaagtgattg taaggcttta gataaagagg
     8701 ttttagagct tttagaaaaa gatataaagg ttgtagcaat gagagatgct actcgtgggg
     8761 gacttagtgc ggttttaaat gagtgggcaa agcaaagtgg aaatgatctt ttgatctttg
     8821 aagaaaaaat catcgttcaa gatgaggttt taggactttg cgagcttttt ggttatgaag
     8881 cctatgagct tgcaaatgaa ggcactttta tactttgtgt ggaaaaagaa gatgggttaa
     8941 aagccttgga aattctaaaa aaatacaatg taaatgcgag tattatagga gaagttttag
     9001 aagagaaaaa agcacgcgtg atcttacaaa acgcttatgg agcaaaacgc tttttagaaa
     9061 gccctaaagg cgaactttta ccaagaattt gctaatgcac gaattaagta tagtagaatc
     9121 tttaatcgaa ctttgtgaag aaaatgcctt aaacaataag gcttacaatg tgcaagaaat
     9181 ttatgtaaaa atcgggcgtt taagcggtgt agaagtggat ctttttaagc gttgttttga
     9241 aacttttaaa gaaaactcaa atatttgtaa aaatgctaaa ctttttatag aacttgcccc
     9301 acttgaaatt ttatgcttaa aatgcgatca aacaagcatt ttagaagaaa atgtttttaa
     9361 gtgtcctaaa tgtcaaagta tagaatacaa aatcacacaa ggtggggact tgcaccttat
     9421 gcgacttgtg atggagtgaa agtaaaatca ataaatgatt ttactttctg ctttcaaatg
     9481 ctttgataat atctgcttta tattgataaa tatcttctaa tttttctata ttataactcg
     9541 ctccatctgg aaaactaata gattttttgc ttgtattaaa atataatcta catatccact
     9601 tagtaacctt gccttgatat aaaatactaa aatagcttaa agtatctttg taacttacat
     9661 cttcaagatt ggcactgaca ctagcaagaa ttgattttac tatatagaaa ccttgtaatt
     9721 cttcttctgt tgtgacaata tctttacttt catcaatttg ctcatcattt tcatcatcgt
     9781 ttatgttttg aagattgttt ttaatgcttg tgattttttc ataagctaaa tcattaataa
     9841 tttctttaaa agatttttta atgtaatttt taaattcttc taaaacagca ctagtcattc
     9901 ttttttctgt catttgttta gcaaaaaaac ttgtaaattc atcgcttgga ttttctattt
     9961 cacttttaaa aatttcttgt atacttcggt aatatttttt ctccatagca atgcttagaa
    10021 tttcatctaa gtttaagtca gtgcaaataa aacgttttag atctttaata tctctaggtt
    10081 taagtttttc aagattaaca actaaaaatg gtattttatc cataagattt tgttgttcaa
    10141 tatctgtaaa aaatctatat tcaataccat tggtaagaat ggcaaattta atactaggat
    10201 tagtgttaaa atatcttaca agctgattgt tatgattatt taaattttca gtatgatttt
    10261 tagcttcaat taaaataaaa ggttttgaat ctttgaaaat agcataatcc actttttcgc
    10321 cttttttagt tcctatatct gctgtatatt ctggcataac aatactaggg ttaaaaacat
    10381 cataacccaa tgtttttaaa aagggcattt aaaagtcatt tttgtagctt cttcagtatt
    10441 gacaagtgtt ttgcgttcag ctattgtttc aacgatggca tttaattgat tttcaaaatc
    10501 cttgcaagtt taagcaaatt tgaaatcaaa aattcttttt ttacgagctt agaattggtt
    10561 ttaagctcgt attcgcattt aagcaaaaga gtgaaaattt ctttatattg ttcgattttt
    10621 aaactaaagg cttgagagct taaattttgt cccacttgag gaggtggagt atagcctaaa
    10681 agatctttaa agtcaatttt accattgact ttagcataaa gtgcgatttt aaacaaacga
    10741 taaaaagaat tatacaaaga gttgattaaa gcaatttcat taaaattatc taaaattttt
    10801 tcaagttcgc ttttaaagtc ttgtttcttt aaaattttat caaaaaagct ttcaaaactt
    10861 cctgtattca aactatagca gtattgttct atggtttttt catctactct taaatcacta
    10921 aatttattaa gctcactcgc agcaagatat aagttttcat caaaacttgt aaaaagagta
    10981 aataaagcat tttgagtgat ttcaacccct agttgttttg cttttatact taaaagctcc
    11041 acgccttctt tagctccgtt agctttaaaa aatcttacaa aatgaggaga gaaaattttt
    11101 tctatatcgc tttgtttaga actttcatca taaagctcta aaagaaagaa attgtccgta
    11161 ttgtttttac aaagatctac taaaacttta agatcttttg ttggaatttt tttagaagtt
    11221 ttgatttcta gtaatttttt ttcactaaaa agcgatcctg cgcttaaaaa atcactcgca
    11281 cgagtgaagt tgtattcttc aaaaaaaagt tttaaagttt catcgggctt atatttttct
    11341 tttataaatt cagcataaag ttcgctttga aaattatctg ctccataaag aaagaaaaaa
    11401 ttaggtattg aatctttaga aagtaagatt tgaagctctt ttctatacat tttcttcctt
    11461 tataagtctt tgggtgattt tagcataaat ttttgccata actatatccg cttccatgat
    11521 ttgtacttca acattttcta gcaaatttac acgcgtatca taaaggatta tatccgctcc
    11581 tttgatttca tcatctagtt tggctatgca aactccatca ttttggacaa ctaaagcttt
    11641 aaattttttg cctatatttt tagctgccca tctagcaaat tttctatcca taaaatcaaa
    11701 agcaacctta tccgcctctc tttcaagtgt gctaagattc tcacaagtgc tttctatgtt
    11761 taaaagtaga taattaaaaa gtttttcatc gtttttttgc ttggctttta aaagtctgtg
    11821 caaaataaga tcagaatacc ttcttatagg gcttgtaaaa tgtgagtatt tatcaaaacc
    11881 taagccaaaa tgtcccgcat tgacgctaga atattccgct tttttttgtg ctttgatgat
    11941 gagtttatct acttctgctc ttaaatttaa ttcatcggct aaagcttgta tgtcgcgtat
    12001 gagctcagga agattgggct taaaatttac atcgatgcct agttcgcgta attcatttaa
    12061 aagcttatcg atttttctta catcagcact taagtgattt ctaaaaacac ctatatctat
    12121 gagttttgct gcggctttat tggttaaaag catacaatct tcgatcaaat tatgcgaagg
    12181 cgtgtctttt tcaaaaactg tactttttag acttaaattt tcatctaaat tcattcttaa
    12241 ttcttcggtg cgaaattcaa aggcattttt aagacgcatt ttgcgtaaat tttttgtgat
    12301 ttcaaaaagc tcataaagcc atgaaagctc ttttaaatca ggtttttgta tcaaaatttt
    12361 atcaacttca tcataattaa aacggcgttt tgaattgata ataccttcaa aaagttcttc
    12421 ttttatgact ttattttcat gatcgagtgt gattttaaaa caatacgcta agcgatctaa
    12481 atgaggtttt aaagaacaga tattttcact taaaggatgc ggtaacatag gtatagcaat
    12541 atgtggaaaa taaatagaaa atccacgatt tcttgcttct ttatctatag cgctataagc
    12601 ataaacatat tcgctaacat cagcaatagc tacataaatt tctcgttttt gggtgtcaaa
    12661 ataaatcgca tcatcaaaat cttttgcatg tataggatct atggtgcaaa aaggcaaggc
    12721 tcttaaatcc atgcgatttt tatacatact cgcatcaaca ctatcaccgt ttgctagagc
    12781 ttctttgata caagcgtcgc taaattcgtt atttttatta aaaagagcta gggagatttt
    12841 ttcatctacg ctttcatcat ggatatgccc taaaacttct atgatattgt tattttcatt
    12901 ttctattttt aaaattgtcc ctaaaggtag tgcttttaag gatttttgag aagcttttaa
    12961 ggtggtgctt aatcctgttt tgatattcat tccaagcacg gcttcgccat accttttggt
    13021 gatcactaaa gaggtttcat tggctctttt tagaaccaaa atcacctttg cactggggcg
    13081 ttttttcttt aaaggtagaa gttttactgc gactatatct ttatagtttg cgccttttag
    13141 gtttttgttt tctatcaaaa gatctttttt gaaactttca tcaaagcatt gtaaaaaacc
    13201 tgtgccttta ctcgaaatat caagtactcc aaaggcaaaa ccattgttaa gatagtattt
    13261 gtttttgtgt tctttgatga tatgattggt taaaagttct cttaaaattt gtttaaattc
    13321 attgtttact tcgtgagagc taatgccata actaagactg tttaaaaatt ctttcacttt
    13381 tgatacttta tgattttttg taaaattctt acataaagtt tataaaaaaa atatgaaatt
    13441 tatactttaa ttgctataat aataccttta atttttgaat ttttaaggag tgaatatggc
    13501 tattacagta tattatgata aagattgtga tttaaattta atcaaatcaa aaaaagtagc
    13561 aattataggc tttggctctc aagggcacgc tcatgcgatg aatttaagag ataatggcgt
    13621 aaatgtaatt atcggacttc gtgaaggtag tgtaagtgct gttaaagcaa aaaatgctgg
    13681 ttttgaagta atgagtgtga gtgaggcttc taagatagcg gatgtgatta tgattttagc
    13741 tcctgatgaa attcaagcag atatttttaa tgtcgaaata aaaccaaatt taagcgaagg
    13801 caaggctata gcttttgcgc acggttttaa tatccattat ggtcaaattg ttgctccaaa
    13861 aggtatagat gttatcatga tagcacctaa agcaccagga cacacagtaa gaaatgaatt
    13921 tactttagga ggtggaactc cttgtttaat agccatccat caagatgaaa gtaaaaatgc
    13981 taaaaattta gccttaagtt atgcaagtgc gattgggggc ggacgcacag gtattataga
    14041 aacaaccttt aaagccgaaa cagaaacaga tctttttggt gaacaagctg tgctttgtgg
    14101 tgggcttagt gctttgattc aagcaggttt tgagactttg gttgaagcag gttatgaacc
    14161 cgaaatggct tattttgagt gtttgcatga aatgaaactc attgtggatt tgatttatca
    14221 aggtggtatt gcagatatgc gttattctat ctcaaatact gcagaatacg gcgattatat
    14281 tacaggacca aagattgtta ctgaagagac taaaaaagcg atgaaaggtg ttttaaaaga
    14341 tatacaaaat ggtgtttttg caaaagattt tatcttagaa cgccgtgcag gttttgctag
    14401 aatgcatgca gaacgcaaaa atatgaatga ttctttgata gaaaaaacag ggcgcaattt
    14461 gcgtgctatg atgccttgga tcagtgctaa aaaattagta gataaagata agaactaaac
    14521 attgtcaaag aaaaaattag ttcaaattca gcgttattta atcatagcta tacttttttt
    14581 actttgtata gctttagctt tgggaatttt agtaaaatat caaaattccc aagatgtttt
    14641 ttctgttaag ccggattatt ttattgataa acaagaagat ttaatttcat caaataaaga
    14701 tcattatgaa attggtattt ttcaagagaa tgagtttgat aataataaat ctgtaagtat
    14761 tttagagcaa aaaattcaag aaatcgatga tttaaataca agtttaaatg agcaaaattt
    14821 aagcagtgtg gagcagaatt taagtttaga gcaaaatcag agtttagaac aaaattttat
    14881 tccaaaagat acaaatttaa cccaagatca aaatttaact tttgatgaag atattcattt
    14941 aaataaaatt tctaaaaaac caaaacttgc tattattatc gatgatatgg caaatgcaag
    15001 tcaggttaga ggtttaaaag ctttaaattt aaagttaaat ccttcttttt ttccgccaga
    15061 taaaaaccat agtgaaacgc caaaacttgc tttaaaattt gatttttata tggtgcattt
    15121 acctttagca gcaattaatt ataataaacc agaaattgat actttaaatc caaatgatag
    15181 caaagaaaga atttttaaaa aaatcaagca aattaaaaaa gattttaagg atttaagata
    15241 tatcaataat cacacaggaa gtttatttac aagcaatgaa gaagctatga gaaagcttta
    15301 cgaggcttta aaaaatcaaa atatattttt tgtagattct aaaactatag gaaattctaa
    15361 ggcaaataaa atcgctaaag aactcagtat gccttatata caaagagatg tgtttttgga
    15421 taatgaagat gatgttaatt atgttaaaaa acaacttgaa agtgcggtaa aacttgcaca
    15481 aaaaaaaggt tttgttatag ccataggaca tcctaggaaa aatactttta aagctttaga
    15541 gcaaagtaag gatttgttaa aaggcgttga tcttgtgtat ttgagtgaaa tttatggcaa
    15601 gtgaaatttt gcctgatgaa tttttagagc tttttcaaga tttaaaaaag cctcctaaaa
    15661 aattacacta taaaggaaat ttatctttat taaaacaaga taaaatcgct attataggtt
    15721 caaggcgtat gagtgtttat acgaaaaatt gtgttttttc cttagcgagt atgcttaaaa
    15781 atgctcatct ttgcgtggta agtggcggtg ctttgggtgt ggatatcacc gcaagtatgg
    15841 cagctatgcc aaatactata ggtatttttg ccaatggttt agatcaaatt tatccaagaa
    15901 ctaatgaaaa aatcattaaa caaatttatg aaaatgcttt agctttaagt gaatacgaag
    15961 atgattattt gccaaaaaat tatgattttt tactaagaaa tcgtttggtt attgctttaa
    16021 gtaaggccgt tgtggttgca caagcagata taaaaagtgg ttctatgcag agtgcaaaac
    16081 ttgctttaga actcaataaa cctttatatg ttttaccaca aagactagga gaaagcacag
    16141 gaactaattt tcttttaaag gaaaataaag caaagttaat ttgtgatttt aaagaatttg
    16201 taagtgagtt tgcaagtata gatataaatc aagatgaatt tttagagttt tgtaaaaaag
    16261 gtgtgagtgt tgatgaggct ttaaaaattt atggacaaaa agtttatgaa tatgaacttg
    16321 agggaaaaat ttccatagaa gggcttttta taagggtttt agcatgagag ctttggcttt
    16381 agatgtaggt ttaaaacgca taggtgtagc gctttgcata gataaaaaga tcgctttgcc
    16441 tttagatgca gttttaagaa aaaatcgcaa tcaagccgct aatgaaatca aaaatttact
    16501 taaaatacat gaaatttctt tacttattgt aggcattcct aagggtggat caagtgaaga
    16561 agaaatgaca agacgcatta agcattttgt ttctttgctt gaatttgata aagaaatttg
    16621 ctttgtagat gaaagcggaa caagcaaaga agctttagga tacggcgtag ccaatacacg
    16681 caaaaaagat ggtaaattag actctttatc cgcttttatc atgataaagg attattttgc
    16741 tctctagaat agaaaaactt tataccaaag atgaaatgca aaatatttta tcttctttta
    16801 ctcaagaaaa aaatgtttgt gtatttacaa atactttaaa aattagcatt gaagaattag
    16861 aaaaagaatt tttaaaacaa aaattaaaat ttaaaaagat caatgcttat tgttatttgt
    16921 ttgatgccaa agataaggct atcttaagtt ctatgaaagc ttttaatgag gcgcactttt
    16981 atatacaaaa ttattcttct tatttgtgtg ctttaaattt agaagtcaaa gcagggcaaa
    17041 gggttcttga tatgtgtgca gctccgggtg gtaaaagtat caatcttgca aattttatgc
    17101 aaaatacagg ttatttagct tgcaatgaga tgagtaggga tagatttttt attttgcaaa
    17161 aaaatcttaa aaattacggc gtgaatgcta aagtttttat gaaagatggt aaaaatatag
    17221 gcaatttatg tcctttaaaa tttgataaaa tcttacttga tgcaccttgt tcgacttttg
    17281 ctaaaatagg ttttgatttg gaaaaaagtt ataaagaaat caaaaatatt gcaaaaactc
    17341 aaaaaaaact tctacattct gctttaaagg cattaaaaat aggtggagag cttgtatata
    17401 gtacttgcac ctttaccaaa gaagaaaatg aagaagtgat agagaatgct ttaaaaagtg
    17461 agtttaaatt agagctttta gatattgatt tggaaaatgt tgaggctaaa gcagggcaaa
    17521 gtgaagaatt tgctgaaatt tcaaaatgca gacggatttt accaagctta gactatgatg
    17581 gatttttcat agctaaactt aggaaattat gttaattaat aaaattattc acatttaaat
    17641 acaaattcat aaaaaaactt aaaaaacaat aaataatttt ttctttattt taaagcttaa
    17701 agttctattt ttaagtactt tgaaaagaaa atcacagcgt gaaaaggctg tgaataaagt
    17761 tgaatttttt ttaaccttaa aaagatgaaa ttagtctgat tgtatttttt gcagttttgg
    17821 agctattata gcttgacaat atccttgatt gggattattt ataaaataat gttgatgata
    17881 gttttcagct ttgtaataag tttgcaatct tgaaatttta gtaactattt ttttgctaaa
    17941 tattttttgc tgttcttcga tgaaattttg agctaaaatt ttatcttctt cattttcgta
    18001 aaagattatt gagcgatatt gtataccaat atctccacct tgtttatcta tacttgttgg
    18061 atcatgaatt ttaaaaaaga gtgttaagat ttcaagaaga gagatttgtt tttcatcgta
    18121 atttattttg acaacttcta tgttgccatc accattacac acgctttcat agctaggatt
    18181 tggatttcct ccgctatatc caacttcagt atcgattaca ccttttaggc gttcaaatac
    18241 ggcttcaaca caccaaaaac aaccaccacc taaaacgata tttttcattg cgagttttcc
    18301 ttgagtttag ccctttgaag ggctaggatt atttgtagtt tttgattgct ttttctaaaa
    18361 tttcaattgc agctttttca tctttgaaat cttgcacttt aacccattta tttggttcta
    18421 aaattttata agtttcaaag aaatttttga ttttatttaa agttgcttgt ggtaaatctg
    18481 tgtaagtttt tatattgtca tatcttgcat ctatttttga atttggaacc gcaagaagtt
    18541 tttcatccat tccgctttca tcttccatga ttaaaacacc gattaagcgg caaggaatca
    18601 cggctccagc ttggatagga tattcattaa gcactaaaat atccacagga tcaccatcat
    18661 cagccaaagt attggcaata aaaccatagt ttgctgggta aaacatcgca ctagccataa
    18721 cgcgatctac catgatagca ccactatctt tatcgatttc gtatttgata tttgagccgt
    18781 atggaatttc gattacggca ttgattttat ttggaatatc tccgattttg attttgttta
    18841 aattcatttt ttctccttat atactttgaa tttttttaat cagttctttc atgtctgcaa
    18901 cgataggttc gatagcgcgc tctccatcga taataaaatg aagttttttc ttttgataaa
    18961 aatctaaaat ttcatttaaa ggttctgtat aaactttcat tctattgtaa aacacttctt
    19021 cattatcatc tgcgccacga tttctgccta aaactctttc tttggcaact tcttcgctta
    19081 ctcttacttc tatgacgcct ttaagacaaa tttcattttg ctcacttaaa accttatcaa
    19141 attccatcat ttgctctacg cttcttggat agccatcaat gatgatagtt ttagttggag
    19201 cagcttttag agcacaaact atagtattta taacaacatc taaaggaaca agattgcctt
    19261 tggagataaa actatctata gtttttccaa gctcactccc acttgctact tcagctctta
    19321 aaagatctcc tgttgaatag tgtgtaatat ttgtcgcatc tgcttgtgcg attaaactag
    19381 catcggtagt ttttccacta cctggtgcac ctatgattaa aaacaattct ttcattttat
    19441 attctccctt aatttgattc ctaattctct cattgcttca ttgctagcag gcgatggtgc
    19501 atctgtcatt aagcattgcg ctctttgggt ttttggaaag gctataacct ctcttatgtt
    19561 gtttgctcct gtaactagca tgatgagtct atcaagtcct atagcgatac ctccatgtgg
    19621 tggagcacca aaacttaaag catcaagcaa gaagccaaat ttttcttttt gttgttcttc
    19681 atcgatattt aaaagtttaa atactttttg ttgaatatca tttttatgga ttcttatact
    19741 acctccacct agctcaacgc catttaacac tacatcataa gcaatagatg aaatttcttc
    19801 taaatcagtc tcatcaatat tttttggcat ggtaaaagga tggtgcatcg cagaataact
    19861 tccgtcatca ttttgctcaa acataggaaa atcaacaacc cataagaatt ccaaggcatt
    19921 tggatctata agttttaact cgttggctaa gaaaattcta aatcttccca tataatcaag
    19981 cacggttttt ttagctcctg caccgaaaaa taccacatct cctacttcaa gctcacagcg
    20041 tttgcttagc tcatttaaat cttcttcgct aaagaattta caaagtggac ctttaagccc
    20101 atctttttta acttgtatga aagctaagcc ttgggcgcca aatttacgca caaattcttc
    20161 aaatctttgc atttgtcttt ttgaaaaaat agtatcgcct tttggaacgc gtatggcttt
    20221 gatgcgattt ttctttgtat ctttggcaat atttgcaaaa atttcattat ttgacttagt
    20281 gaaaatatca atcacatcaa taaatttaag atcaaatctt aaatccggct tatcagagcc
    20341 ataattttcc atagcgtctt tgtattgcat ttgtctaaaa ggggtttgaa tttctttgcc
    20401 gcaagctttg aaaatatctt ttaaaaaagt ttcagctacc ttgatcacat ctttttgttc
    20461 gcaaaagctc atttcaacat caatttgtgt gaattcaggt tggcgatcag ctcttaaatc
    20521 ttcatctcta aaacattttg caatttgaaa ataacgatca aaaccgctac acattaaaag
    20581 ttgtttgaaa agctgagggc tttgtggaag agcataaaat tcaccctgat gcacacgaga
    20641 aggcacgaga taatctcttg cgccttcggg agtagctttg gtaagaatag gggtttcaac
    20701 ttctaaaaat cccatatttg ccaaagaatt tctagctgct atacaagctt tagaacgcaa
    20761 ggcaaaattt tcataaagtt taggatttct taaatctaaa aagcgatatt ttaagcgtaa
    20821 ttcttcattt acactttcat cagcgatagc aaaaggaggt acggcacttt cattttctat
    20881 ggtaagttta gaaacaacta cttcgatttc tcctgttttt aacttaggat ttacaagtcc
    20941 ttcgccacgc ggacgaatag taccttctgt aataagtaca aattcatttc ttgcattgga
    21001 agcgatttca tgagcttctt tactatcatt tggatcgcaa acaagttgga taataccgct
    21061 tctatctctt aaatctataa aaataactcc accatgatcg cggtagctat ttacccaacc
    21121 gcaaagttta acgctttgac caacatggga aattcccaag tctgtattat aatgacttcg
    21181 caaatttatt ccttgaaaaa gattttttaa gataatgagt aaaattatag tatttttatt
    21241 cttttgcttt gctaagattt gatataattt tttatgcaaa ataaaataga ttataaaaat
    21301 attaaaaaaa ttggacttgt tacgcgaccc aatgtgagtt tagataagga aattttaaaa
    21361 cttcaatcga ttttatctat atataaagtt gaacttgtat tgcttaaaga aagttctgaa
    21421 attttagatt tgccaaagta tggattggat gatttgttta aaatatccga ttttgttatt
    21481 tctttaggtg gagatggaac tttgatttct ttatgccgta aagcttgtga atatgataaa
    21541 gcagttttag gaattcatgc tggacattta ggttttttaa cagattttaa agttgatgaa
    21601 gctgaaaatt tttttcaagc tttttttcaa ggagaattta gaatagaaaa gccttatttg
    21661 ttaagtattt ttttagaaga taggcaagga aaaattttag aaaaattggc ttttaatgat
    21721 gtggttatca gtaaaaacaa tcaagcttct atggctcata tagaagtttt tagaaaagaa
    21781 aagaaattta atgaatattt tggagatggg cttattgttg caactcctgc gggttcaaca
    21841 gcttataatt taagtgcaaa tggacccata gtttatactt tagctcaagc ttttatctta
    21901 actcctgttt gttctcattc tttaacacaa cgccctattg tcttgccaaa aggttttgaa
    21961 atagagatta tggcaaagga ttgcatgctt tgcattgatg ggcaagaaaa ttataaaatg
    22021 aatgatttta aaagtataaa agtgggttta agtgataaaa atgtggcttt aattcaccca
    22081 aaaaataggg attattttca aattttaaaa gaaaaattac actggggaaa ttgatgataa
    22141 atagaatttt tatgaaagaa aatcttggtt ttaaaaaggc tgagcttgaa atttctaaag
    22201 ggcttaccgt ttttacaggc ctaagtggag ctggaaaatc ggtcttgttt aaaggaattt
    22261 tatccgcatt ttctttgagt gaaagtgagg ctaaaattgt cgaaatagaa gtagatgata
    22321 agttggattt agaaagtttt ggtatagaaa gtgaagagga gaatgttttt aagctcttaa
    22381 aagaaaaaaa cacaaaatat tttattaaca atcaaagcat agcgaaaaaa agtttgcaaa
    22441 atttaagtaa aacttttatt aagtatttaa gcgcaaagga aaataacgaa tttggaaatg
    22501 aaaaattttt aaatctctta gatgccttgg agatgcaaga aaatacaaat tttgtttcct
    22561 ttttagaaga ttttaaaaaa gattttaatg cttatagtca aatttctaat gagcttaatg
    22621 caattttaga agaagaaaaa aaagtagaag aattaaaaga actagctaga gcacaaattg
    22681 aaaaaatttc aagcattaat cctaaaatag gtgagtatga agagctttta atacttaaaa
    22741 aaaagctttc taaaaaagat aaattagaag aagcttggag taaggcagag cgtatttttg
    22801 agcttgaaaa agttgttatt gaagctttaa atttaagcga agttgatgcg agttttttta
    22861 gtgaatgttt aaatgaattg cgtgtgattt gcgaaaatca aaaaatggaa gatttggatt
    22921 ttgatgtgga ggcgctttta gatcgcattg aaaatttatc ctatcttatc aagcgttatg
    22981 aaagcataga aaatgcttta gaagttttaa aacaaaaaaa atatgagcta ga
//
LOCUS       DARATF010000017        22843 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.017, whole genome shotgun sequence.
ACCESSION   DARATF010000017 DARATF010000000
VERSION     DARATF010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22843
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.017"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..139
                     /locus_tag="SB502_000494"
     CDS             <1..139
                     /locus_tag="SB502_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0433969.1"
                     /translation="FMNKKQIYKIFSKFISRKIFLIWLFFIRFISPIAIILVMCYQIF
                     V"
     gene            171..1970
                     /locus_tag="SB502_000495"
     CDS             171..1970
                     /locus_tag="SB502_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HEG0433970.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFTMMDRFRAIVGKDANLQTLARGVNTVTLDTGNSELID
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIVKHGLKHEITITLMDLPSNCKGAHD
                     VPFYEKILKEILTAEIPFHSICFKDASGTSNPNKIYKTIKMARKILPQDTHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LRYEEVLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVTPD
                     ANIVELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKEGIETSEENIFIAAACK
                     EKGIAFLKGEAKVNIRKLASMPKPMSVDENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEILAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIILELCIKIGDTVNEGEVLAIYKN"
     gene            1983..3557
                     /gene="pckA"
                     /locus_tag="SB502_000496"
     CDS             1983..3557
                     /gene="pckA"
                     /locus_tag="SB502_000496"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEG0433971.1"
                     /translation="MKKFDKLGLDNIKEIFHNLSYDELNTHEKANNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQ
                     DVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     YEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            3567..4949
                     /gene="argH"
                     /locus_tag="SB502_000497"
     CDS             3567..4949
                     /gene="argH"
                     /locus_tag="SB502_000497"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEG0433972.1"
                     /translation="MKNEMWSGRFSDASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIIKGLEQVRSEIEQGKFIFDIKDEDIHMAVEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYRTNRELSAEIL
                     GFKDIMLNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGIFDSV
                     KTAKDSLIILNAMLKEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPVFDEKAMELLNFEFSLNSKQSEGSSSIASVEKQI
                     QILEGFIQNL"
     gene            complement(4971..6074)
                     /gene="ychF"
                     /locus_tag="SB502_000498"
     CDS             complement(4971..6074)
                     /gene="ychF"
                     /locus_tag="SB502_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEG0433973.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(6071..7522)
                     /locus_tag="SB502_000499"
     CDS             complement(6071..7522)
                     /locus_tag="SB502_000499"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEG0433974.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYDDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTSTLEKFIISSEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNRA
                     SIHPPRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAVMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPYLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(7519..8115)
                     /locus_tag="SB502_000500"
     CDS             complement(7519..8115)
                     /locus_tag="SB502_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0433975.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(8134..8682)
                     /gene="apt"
                     /locus_tag="SB502_000501"
     CDS             complement(8134..8682)
                     /gene="apt"
                     /locus_tag="SB502_000501"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEG0433976.1"
                     /translation="MIKLTQEEKKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLRHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFAPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(8679..9011)
                     /locus_tag="SB502_000502"
     CDS             complement(8679..9011)
                     /locus_tag="SB502_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433977.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(9011..9448)
                     /gene="rpiB"
                     /locus_tag="SB502_000503"
     CDS             complement(9011..9448)
                     /gene="rpiB"
                     /locus_tag="SB502_000503"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEG0433978.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKIDERSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            9613..10167
                     /locus_tag="SB502_000504"
     CDS             9613..10167
                     /locus_tag="SB502_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEG0433979.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDVKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLTKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
     gene            10184..10972
                     /locus_tag="SB502_000505"
     CDS             10184..10972
                     /locus_tag="SB502_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEG0433980.1"
                     /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEG
                     TNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNIL
                     SAPCSSGEEVYSLALLAAQNFIKDMYILGVDINSSVIEKAKLGKYQGRTLQRLSESEK
                     RRFFLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPETIYFKKIFSPRGVYYEKV"
     gene            11108..11836
                     /locus_tag="SB502_000506"
     CDS             11108..11836
                     /locus_tag="SB502_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0433981.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSEFFSNPKTERARLFLGKILKN"
     gene            11858..12637
                     /gene="peb1A"
                     /locus_tag="SB502_000507"
     CDS             11858..12637
                     /gene="peb1A"
                     /locus_tag="SB502_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HEG0433982.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            12639..13391
                     /locus_tag="SB502_000508"
     CDS             12639..13391
                     /locus_tag="SB502_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0433983.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            13402..14061
                     /locus_tag="SB502_000509"
     CDS             13402..14061
                     /locus_tag="SB502_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0433984.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            14169..15098
                     /locus_tag="SB502_000510"
     CDS             14169..15098
                     /locus_tag="SB502_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEG0433985.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGVLDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            15265..17376
                     /locus_tag="SB502_000511"
     CDS             15265..17376
                     /locus_tag="SB502_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEG0433986.1"
                     /translation="MTQLSTKILWLFVATLGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPILAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEHTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMGKARYTWVTLVPAVFVLVATLYGGIQKIMPYEEGNKVANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISVIKKEISIATQNKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            17357..17554
                     /gene="kcuS"
                     /locus_tag="SB502_000512"
     CDS             17357..17554
                     /gene="kcuS"
                     /locus_tag="SB502_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HEG0433987.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(17594..18007)
                     /locus_tag="SB502_000513"
     CDS             complement(17594..18007)
                     /locus_tag="SB502_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEG0433988.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKKPISEELKRIHGFLNA"
     gene            18069..19901
                     /gene="ciaB"
                     /locus_tag="SB502_000514"
     CDS             18069..19901
                     /gene="ciaB"
                     /locus_tag="SB502_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HEG0433989.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELK
                     QDKTTMLAILRRLVDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKEIIEKNNKILSTQFPNLDDAME
                     FLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEFAFENMIDQL
                     KIFASSEEEKAYIEYFEKLKLAFCEKDEDRVIKAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDENDFDVLKFGNEIKESFEHVYKNIGLEDCELEKEVLSNIE
                     KTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKKIFAFINFVYENAKTKPFMK
                     ISSEVFDKEFLDFGRNILFYQEKIWKRVYEVSTIGHEFGHIFFIANDTEKTMNQSGFF
                     KNIEEYKATTGGLINFFYHEQDDLIMPVFHELIKRAIGLISWQRVDEVRPYYTEGLIH
                     LSLLFESEVLIFENNNLKINFDLRYYEKFKELTLKNYHELAKHYALRLDAKEFLSRFC
                     EIEDNIFLPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFERYKKK"
     gene            20003..20299
                     /locus_tag="SB502_000515"
     CDS             20003..20299
                     /locus_tag="SB502_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEG0433990.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            20426..21325
                     /gene="cysM"
                     /locus_tag="SB502_000516"
     CDS             20426..21325
                     /gene="cysM"
                     /locus_tag="SB502_000516"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HEG0433991.1"
                     /translation="MKVYEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEVIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(21332..21892)
                     /locus_tag="SB502_000517"
     CDS             complement(21332..21892)
                     /locus_tag="SB502_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEG0433992.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLVGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLIDEK
                     GHFYKEISDLNPQEILRELRIFLNSQ"
     gene            complement(21889..22341)
                     /locus_tag="SB502_000518"
     CDS             complement(21889..22341)
                     /locus_tag="SB502_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433993.1"
                     /translation="MRKIIFILAFAFVIAILYIIFDFYVIKDSQKITKTDFSTPLTCD
                     LNVKDCTYSFNNKKVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLAACVLDTMRFRVEFMDNNKPIGFYFDFELKK"
     gene            complement(22345..22764)
                     /locus_tag="SB502_000519"
     CDS             complement(22345..22764)
                     /locus_tag="SB502_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEG0433994.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTDKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKTIELKNIDSKEF"
BASE COUNT         7827 a         3005 c         3985 g         8026 t
ORIGIN      
        1 ttttatgaat aaaaaacaaa tttataaaat tttttctaaa tttataagtc gaaaaatttt
       61 cttaatttgg ttgtttttta ttcgttttat atcgcctata gcaataattt tggtaatgtg
      121 ttatcaaatt tttgtataat aatgaaaaaa tattttttta aggaaaaata atggctaaaa
      181 aattcatcga tgtaatggat acaagcttta gggacggttt tcagtctgtt tatggagcta
      241 gggttttaat ggatgatttt tttcctgcag tagaagcagc aaaagaagcg ggtattactc
      301 attttgaatt tggtggtggt gctagatttc aaagcttgta tttttatctt aatgaagatg
      361 cttttaccat gatggataga tttagggcta ttgtaggaaa agatgctaat cttcaaactt
      421 tagcaagagg agtcaatacc gttactttag atactggaaa tagtgaactt attgatttgc
      481 atgcaaaact ttttgcaaaa cacggtacta caacgataag aaattttgat gcccttaatg
      541 atgtaaataa tttaaaattt agtggtgaat gtatagtaaa acatgggtta aagcatgaaa
      601 ttactattac tttaatggat ttaccgtcaa attgcaaagg tgctcatgat gtgccttttt
      661 atgaaaaaat tttaaaagaa attttaacag cagaaattcc ttttcatagt atttgtttca
      721 aagatgcaag tggaacttct aatccaaata aaatttataa aaccattaaa atggctagaa
      781 aaattttacc tcaagataca catattagac ttcatacgca tgaaaccgca ggggtgagta
      841 tagcttgcta tcttgcagcg cttgaagcag gggttgatgg tattgatttg gctgcagctc
      901 ctgtaagtgg tggaacttct cagcctgata ttttaaccat gatgcatgct ttaaaaggca
      961 aagattatga tttaggtgga cttgaagaag aaaaaatttt aagatacgaa gaagttttaa
     1021 aagattgttt aaaagagtat tttttaccac ctgaagctac tatggtaaat ccacttattc
     1081 ctttttctcc tatgccagga ggagctttaa cagcaaatac acaaatgatg agggataata
     1141 atattttaga taaatttcca caggtcattc atgctatgag agaagttgtg gaaaaaggtg
     1201 gatttggtac ttcggttact ccagtttctc aattttattt tcaacaagca tttaataatg
     1261 ttatgtttgg gccttggaaa aaaatcgcag aaggttatgg aaaaatggtg cttggttatt
     1321 ttggaaaaac tccagttaca cccgatgcaa acattgttga acttgcttca aaacaactta
     1381 atttagaacc cactacagag cttgctatta atatagccga taaagatgag agtaaaagca
     1441 tagcttatac taaaaccttg cttgaaaaag agggtataga aacgagtgaa gaaaatatat
     1501 ttattgcagc agcttgtaaa gaaaaaggta tagcattttt aaaaggagag gcaaaggtaa
     1561 atatacgcaa attagctagc atgccaaagc ctatgagtgt agatgaaaac aaatttactg
     1621 tagctgtaaa tggtaataaa tatcatgtgg aagtgagtta tggttttgat aaagatgtta
     1681 atgttaagag tgtaaaaaaa gtagaagaaa ataaaaatat tatttcttca aattcaacaa
     1741 gttctgtcga tgctgaaaat gaaattttag caggtatttc aggtaatgtc tttaaaattt
     1801 atgttaacga aggcgaggaa gtaaaatcag gtcaagctat catggtttta gaagcaatga
     1861 agatggagat tgaggttaat gccccaaaag atggaattat tttagagctt tgtattaaaa
     1921 taggtgatac tgttaatgaa ggcgaagtat tagctattta caagaattaa agtgagggaa
     1981 aaatgaaaaa atttgataag ttaggtttgg ataatataaa ggaaattttt cataatttaa
     2041 gttatgatga attaaatact catgaaaaag caaataatga aggtttaagc acggataatg
     2101 atactttttg tgtagataca gggattttta caggtagaag tcctaaagat aaatattttg
     2161 taaaacaaga tccatctagt aaatatatag cttggggaaa ggtaaatcag cctattacaa
     2221 aagaattatt tgataaactt ttaactaaag caaagcaaga attaagcgga aagaaaattt
     2281 atgttcaaga tgttttttgc ggtgcttctt tgcaaagtcg caaagcagta agatttgtta
     2341 ctgaaattgc atggcaagcg cattttgtta aaaatatgtt tattcgccca agtcaagagg
     2401 aacttgagaa ttttaaagca gattttattg tttataatgc ttgcaaatgc atcaatgaag
     2461 attacaaaca agatggttta aattcagagg tttttgtgat ctttaatgtt gaagaaaata
     2521 tagcggttat tggtggaact tggtatggtg gagaaatgaa aaaaggtatt ttttctatga
     2581 tgaattattg gttgccacta gaaaataaac tttctatgca ttgtagtgca aatgtcggag
     2641 aaaaagacga tgtggcactt ttctttggac ttagcggtac aggaaaaact acgctttcaa
     2701 ccgatccaaa aagaagactc ataggtgatg atgagcatgg ctgggatgat gaaggtgtgt
     2761 ttaattttga gggcggttgc tatgcaaaaa caatcaatct tgatcctgaa tatgagcctg
     2821 aaatttatgg agccattaaa agaaatgcac ttttagaaaa tgtagtttta agagctgata
     2881 agagtgttga ttatgctgat gcctcaaaaa cagaaaacac gagagtttct tatcctatag
     2941 agcatattga aaatcatgag cctagtctaa aagcagggca tccaaaaaat attatatttt
     3001 taagtgcaga tgcttttgga attttacccc cggtaagcaa actaagcaaa gagcaggcta
     3061 tgtattattt tttaagtggc tatacagcaa aagtagctgg aactgagcgc ggtataacag
     3121 agcctcaagc aactttttca gcttgttttg gagaaccttt tatgccttta catccaacgg
     3181 tttatgcgag attgcttggt gaaaagattg aaaaacatga agttaatgtt tatcttgtta
     3241 atacgggttg gagtggcgga agctacggtg tgggtaaaag aatgagcatt aaggctacta
     3301 gggcttgcat taatgctatt ctagatggaa gtattacaaa atgcgaattt gaaaattttg
     3361 aagtgtttga tttagctatt ccaaaagctt tagaaggtgt agaaagtgta cttttaaatc
     3421 ctataaatac ttggttagat aaaaatgctt atattgcaac aagagataaa ttagcacata
     3481 tgtttataca aaattttaaa cgttatgaag atgtcaaaga aggcattgaa tttagcaaat
     3541 ttggaccaaa aatttaaggc atttaaatga aaaatgaaat gtggtcagga cgttttagtg
     3601 atgcaagtga tgagctttta aaagaattta atgcaagttt aaatgtagat aaaactttgt
     3661 tcaatgaaga tatacaaggt tctatagcac acgctacaat gcttgaaagt tgtggtattt
     3721 taaaaaaaga agaattagat gctattataa aaggtttaga gcaggttaga agtgaaatag
     3781 agcaaggtaa atttattttt gatattaaag atgaagatat tcatatggcc gtagaaaagc
     3841 gtttaagcga gattataggt agtgaaattg gtggaagact tcatactgca agaagtagaa
     3901 atgatcaagt ggctactgat tttaaacttt ttgtcaaaaa atctcatatt gaacttataa
     3961 agcttttaaa agaattgatt caaaccatgc tcgaacatgc taaagtgcat aaaaaaacta
     4021 ttatgccaag ttttacacat ttacagcacg ctcagcctgt gagtttttct ttttatattt
     4081 tagcttatgc ttttatgtta atgcgagata ttaagcgttt gcaaaatagc ctagaactcg
     4141 cagacttttc gccacttgga tcttgtgcat gtgcaggaac aagctataga accaatcgtg
     4201 agttgagtgc tgaaatttta ggatttaaag atattatgct aaatgctatg gatggagtga
     4261 gtgataggga ttttgctctt gatttgcttt atgatatagc agttattttt acacacacat
     4321 caagactttg cgaagaaatg atcttatttt caagttcgga gttttctttt ataactataa
     4381 gtgatagctt ttcaacagga agttctatta tgcctcagaa aaaaaatcct gatgtttgtg
     4441 agcttatacg tggaaaaaca gggcgtgttt atggaaattt gatttctctt ttaactataa
     4501 tgaaagcttt acctttagcc tataataaag atatgcaaga agataaagaa gggatttttg
     4561 atagtgtaaa aaccgctaaa gatagcttaa tcatcttaaa tgcaatgcta aaagaaatac
     4621 aaattaataa agaaaatatg cttaatgctt gtaaaaaagg tcatttattg gctaccgatt
     4681 tggcagatta tttggtgcgt gaaaaaaata ttccttttag aaaagcacat tttatagtgg
     4741 gaaatgttgt tgcacaagct gaagcacaag gtattgatat aagtgaaatt aaagatcttt
     4801 caaaaataga tcctgtattt gatgaaaaag ctatggaact tttaaatttt gaattttctt
     4861 taaattctaa gcaaagtgaa ggctcaagtt ctattgcaag cgtagaaaag caaattcaaa
     4921 ttttggaagg ttttattcaa aatttataaa tattgtttag gctattttgc ctaaacattg
     4981 aatctaaagt gcattacatc gccgtctaaa acgatatagt cttttccttc aaggcgtagc
     5041 tttcctgctt ctttggcgcc attttcgcct ttgtattgga tatagtcttc ataggaaata
     5101 acttcagctt ttataaagcc tttttcaaag tcattatgaa tcacgcttgc tgcttttggt
     5161 gctttccagc cttttttgat tgtccaagaa cgcacttcaa ctacaccagc ggtaaaataa
     5221 ctgatcagtc caagcttagc aaaagcagtg cgtatgattt gatcaagacc gctttcgtta
     5281 actcctagag agcttaaaaa ttcatgactt tcttcatcgc ttaatcctac taattcttct
     5341 tcgatttttg cacaaagctt gataacttca tgatcatttt ttttagcata ttcttttaaa
     5401 gcttttacat aatcattatc ttcactaata ccattttcat caacatttgc accataaatc
     5461 acctctttag cagaaagcag tcttaattcc ttgattaggg cttgataaat ttcactttcc
     5521 ttttcaggat aagaacttgc agctaagcct ttgtttaaat gatcaagtaa ggaatttgca
     5581 agttcgagac tttctttggc gcccttttga ttggctttgg cttctttggt gagtttttct
     5641 atttttttac tcagttgctc aatatctgct aaaataagct ctgtattgat aatttctaca
     5701 tcacgtaaag gatcaactcc accttcaaca tgggtaatat tttcttcatc aaaacaacgt
     5761 actatatgca aaataacctc agtttcacgt atatttgaaa gaaatttatt tcccaagcct
     5821 tcgcctttac ttgcgccttt aacaagtcca gcgatatcta caaattctat taaagaatgc
     5881 ataattcttt caggttttac tattttagca agttcattaa gtcttaaatc aggaacttca
     5941 accatggctt tattaggctc tatggtgcag aaaggatagt ttgcactttg ggcattttgt
     6001 gctttagtta aagcattaaa agttgttgat ttgccaacat ttggaagtcc tactatacct
     6061 acgcttaaac tcatttagct ttccttaaaa tttgaattaa ataattaaca cacattctaa
     6121 ctccagctcc acctgcgcca aaactagaat atccccaaga tttttctgta taagcaggtc
     6181 ctgctatgtc aagatgtagc catttatctt tatattcttt acgaataaat ttatctaaaa
     6241 ataaccctgc ggtaattgca cctccgtagc gactagaggc agtattacta acatcggcaa
     6301 tatttgattt tataagttct cttaagtaag ggttgaaatg taagattgtg gtatattctc
     6361 cgcttttttt agagcttaga taaaaatcat tttgcaattc ctcattattt cccataatag
     6421 cacttgtaaa ttctccaagt cctacaacac aagctccagt aagagttgcc atatcgataa
     6481 gtaaatcagg ttttaaatcc tgtgcaaaag aaagacaatc agctaaaacc aagcgtcctt
     6541 ctgcatctgt atttcttacc tctatgctta caccttcacg actgattaac acatcatcag
     6601 gcttataagc attgccgcct atcatatttt cagttgcgcc caaaatgcaa tgcacttcta
     6661 aatctaaagc aagttcagct acggctttta tgattcccat tactgctgct gcaccgcttt
     6721 tatcagcttt cattgtaagc ataaaatcag ctggttttaa gcttaatcca ccgctatcgt
     6781 aagttaagcc ttttccaaca aatacaacac gtttttttgc atttttggct ttatagctta
     6841 gatgaatgag gcgtggtggg tgtatcgagg cgcgatttac cgctaaaaag gcattcattt
     6901 tttctttggc taagaatttt tcatcataaa ttttacaaat aatgttttta ttttctttag
     6961 ctaaattttg cgcatcttct gccattttta aaggggtgta aatttcagga atttcattga
     7021 ctatattttt agtaaaattt gtagcattag ctaaaatttc tccacgctct aaacctatct
     7081 tagcttcatc tttattaaat ttcttaccat ttaattcttc gcttgaaata ataaattttt
     7141 ccaaagtact tgtttttttc tcgcttttat atttgtcaaa tttataagct ccaaaaagta
     7201 cgccttcaac taaagatgca aaacttctaa ctacacaatc tcctattatg ctaggaagtt
     7261 ttacgctttt aatattaagt ttctcaagag ttttatatgc tgtgcaaaga cttaatctta
     7321 tatcatcata agcaagactt ttaagctcta aataaagctt tttattgttt aagtctaata
     7381 atgcaccttc gcctttgtaa ttattaagtt taaaaaaatc tttttctttg ttaaaaattt
     7441 ttaaattttt atcctgtata aaaacaagtt caaagtctgc ttttatagca tctagttttt
     7501 tatcgtttaa ttcaaatttc atgatttttt ccttttatct ttaagtatag ctttttccat
     7561 ttgtttaaaa ccaaataata aaagggataa aaaagctata ataataatgg ctgcataata
     7621 ccaatgttct tcagcccaag tcaccatctt ccaaatttgt tctccaaaat accaagctag
     7681 aagtatagtg attgatgccc aaacccaagc actaaaaaga ttgataatag caaatttttt
     7741 tgcactataa cgcgtgattc ctatactcat aggtataatg gttctaaagc catacatata
     7801 gcgttgtata aaaataatag gccaaccaaa acgttgtaaa agtaggtgtg ctactgcaaa
     7861 tttacgcctt tgagttttta attttttttg tatgtagcgt ttattatatc ttcctatata
     7921 gaaataaatt tgatcaccta caaaaccacc aagtcctgct ataaatataa caaaacctaa
     7981 atttacatgt ccttgatgag caaaaatacc tgctaaaatt aaagctaact ctccttctaa
     8041 aatgcaccat aaaaaaataa taatataagc tagatctttg tattggtaaa gtaaattttt
     8101 taaaaattct tccatttgta cctttctata gttttaaatt tctaaaacac tataaactga
     8161 agtaagtttt tcaagtttat ttgctccatt taaatcttta agattcatta aaaaacaagc
     8221 ttcaacacat ttagctccag ctttttgaat gagttcatat gaagctatag ctgttccgcc
     8281 agttgctatt aaatcatcta caagtaaaac tcttgcattt tgaatatttt taaatgcatc
     8341 tttatgaagt tctactttat cgctgccata ttcaagatcg tattcgcagc taaaggtttc
     8401 aaaagggagt tttccaggtt ttctaatagg tgcaaaagga agattaagtt ttgcacaaat
     8461 catagatgca aagataaatc ctctgctttc tgttcctgct atgaagtcta gattgtaatc
     8521 tttgtagcgt tcttttaaat gtctaagtag aaaatttaaa gcttctttgt tatttagtag
     8581 agtggtgata tctctaaaaa taattccttt ttttggaaaa tcaggaataa tcctaatgct
     8641 atcaagcaga tatttttttt cttcttgtgt tagttttatc ataataatgc ctcgattttt
     8701 gcttctaatt ctttaattct ttgtcttagt ttgtcatttt ccaagcgata ttgagaattt
     8761 ctggttctta aagatgtaag gtctgctttg attttattaa gttcttctgt gagtatatct
     8821 atatttccaa gacttctttg aagttgaatt tgtagttttc taatgacaat ctcagtatca
     8881 tcaagattgt ttttgataaa atcttttgat gttttttctt tattaagtag agttttatag
     8941 taaaacaaca ttacaataag atagatagtt gcacaaatca atatagttaa aacaagccag
     9001 tttgtaaaca ttatattttt acctcaattt tttgaattct ttgcatatgt ctcccttctt
     9061 caaaaggagt ttgaatgaat ttttctataa tatctatagc taattcaacc ccgattaatc
     9121 ttccgcctaa tgccaaaaca ttggcatcat tatgccttct tgcaagttct gcacttaagc
     9181 tttcatgaca taatgcacaa cgaatgtttt tatgacgatt tgctgcaata gaaattccaa
     9241 ttccacttcc acaaataaga atgccaaagc ttcgttcgtc tattttttcg gcaagtaaat
     9301 gtgcataatc aggataatcg cagcttgcgc aagtgtttgt tcctaaatcg ttaaaaatta
     9361 tatttttttc ttttaaaaat acgcaaattt tttcttttaa ttcaaaacca gcatgatcac
     9421 tagcaatata aattttttcc ctaagcattg gcttcctaat tactatataa aataagataa
     9481 aaacctaatc ttatcatatt aaatcataaa aacagctttt ctttttttaa aaataagctt
     9541 tatttttctt tatatatgtt agaatcatgt gacaagaaaa ataaaatttc aataaattaa
     9601 ggggagaaga aaatgaagct catactcata ggatcttcaa caggtggtcc taatcagctt
     9661 aaatttcttt taaaggatat tgatgtaaaa aatacttgtg tagttatagc tcagcacatg
     9721 agtgccagtt ttattccatc ttttgtgggg caatttaata aagaagcttt tagtgaagtg
     9781 tgcttattga acgataaaga gatattaagc aataaaattt atatttgccc taaaaatact
     9841 attttatctg gaaatttaaa tattgtagcc gcttggcaag atgtggcttc aagctttaaa
     9901 ccgagtgtgg atttactttt tcattccgct gtttctttga caaaaacaaa taaaatactt
     9961 gctattattt taacgggcat gggagatgat ggcgcaaaag gtttatttga gctttataaa
    10021 acaggagtta gatgtttatg tgagaatgaa gcagatagcg tcgtttatgg tatgccaaaa
    10081 agagcaaaag atatgaatcc gcatttaaaa cctatgagct taaaagaaat taaaaaagaa
    10141 attgtaaatt ttattgatca ggattaataa taaggaaaat tgcatggaaa aaaaaataac
    10201 tcctagcgaa ttggaactta atgaatttat aaaaattatc aacgaaatga gtggtattga
    10261 tttaaccgat aaaaaaaata tactagcttt aaagttgaat aaatttcttg aaggaactaa
    10321 tactaaaaat ttttccgaat ttttgggaaa attaaaaagc aatagacaac ttaaacaaga
    10381 aactttagat tttgtaacca taggtgaaac ttatttttta agagaattgg ctcaattgaa
    10441 agaaataatt tattatgcca aaagcttaga aaagagagta aatatcctaa gcgccccttg
    10501 ttcaagtgga gaagaagtat attctttggc attattggct gcgcagaatt ttattaaaga
    10561 tatgtatatt ttaggcgttg atattaattc aagtgtgatt gaaaaagcaa aacttggaaa
    10621 atatcaagga agaactttac agcgattgag cgagagtgaa aaaagaaggt tttttttaga
    10681 aagcgaagat aaattttata ctattaataa aaatgagctt tgtacttgta aatttgaact
    10741 ttgcaatgtt tttgaagaaa aattttcaag attgggaaaa tttgatatta tagcttctag
    10801 aaatatgatt atttattttg atcatgaatc aaaactaaaa cttatggaga gatttcatag
    10861 aattttaaat gataaaggaa ggctttatgt tggcaatgct gatttaattc cagagactat
    10921 ttattttaaa aagattttct ctccaagagg tgtttactat gaaaaagtat aaattctaaa
    10981 aattactaaa agttacactt tggaaattta ttagtaaaaa taagttacat tttgaagtag
    11041 ttttctttat ttaatgataa aataatttca attaatttta tatttagtta aaaataaagg
    11101 aaaaaacttg attgaattaa aaaatgtaaa caaatactac ggaactcatc atgttctaaa
    11161 gaatattaat ctttctgtta aagaaggtga gaagcttgtt attataggtc caagtggaag
    11221 tggaaaaagt acaactatcc gttgcatgaa tgggcttgaa gaagttagtt caggagaggt
    11281 cgtagttaac aatcttgttt taaatcataa aaataaaatt gaaatttgcc gaaaatattg
    11341 tgcaatggtt tttcagcatt ttaatttata tccacatatg acggttttgc aaaatttgac
    11401 cttagctcca atgaaacttc aaaaaaaatc taaaaaagaa gctgaagaaa cagcttttaa
    11461 gtatttaaaa gttgtaggtt tgctggataa agcaaatgtt tatccagcaa ccctttcagg
    11521 tggacaacaa caacgcgttg ctatagcaag atcactttgt actaaaaaac cctatatttt
    11581 atttgatgaa cctacttcag cccttgatcc agaaaccata caagaggttt tagatgtaat
    11641 gaaagaaatt tcacatcaaa gcaatactac catggtggtt gttacacacg aaatgggttt
    11701 tgcaaaagaa gtagcagata ggattatttt tatggaagat ggtgctattg tggaagaaaa
    11761 tattcctagt gaatttttct caaatccaaa aactgaaaga gcgcgactct ttttagggaa
    11821 aattcttaaa aattaaccaa aattgaaagg agaaaaaatg gtttttagaa aatctttgtt
    11881 aaagttggca gtttttgctc taggtgcttg tgttgcattt agcaatgcta atgcagcaga
    11941 aggtaagctt gagtctatta aatctaaagg acaattaata gttggtgtta aaaatgatgt
    12001 tccgcattat gctttacttg atcaagcaac aggtgaaatt aaaggtttcg aagtagatgt
    12061 tgccaaattg ctagctaaaa gtatattggg tgatgataaa aaaataaaac tagttgcagt
    12121 taatgctaaa acaagaggcc ctttgcttga taatggtagt gtagatgcag tgatagcaac
    12181 ttttactatt actccagaga gaaaaagaat ttataatttc tcagaacctt attatcaaga
    12241 tgctataggg cttttggttt taaaagaaaa aaaatataaa tctttagctg atatgaaagg
    12301 tgcaaatatt ggagtggctc aagctgcaac tacaaaaaaa gctataggtg aagctgctaa
    12361 aaaaattggc attgatgtta aatttagtga atttcctgat tatccaagta taaaagctgc
    12421 tttagatgct aaaagagttg atgcgttttc tgtagacaaa tcaatattgt taggttatgt
    12481 ggatgataaa agtgaaattt tgccagatag ttttgaacca caaagttatg gtattgtaac
    12541 caaaaaagat gatccagctt ttgcaaaata tgttgatgat tttgtaaaag aacataaaaa
    12601 tgaaattgat gctttagcga aaaaatgggg tttataatat gaatgaaagt gtaggttttg
    12661 ttgaacattt aagacaaatt cttacttctt ggggtttata tgatgaaaat agtataagcc
    12721 cttttgcggt atggaaattt ttagatgctt tggataataa agatgctttt attaatggtt
    12781 ttatttatac tttagaagta agcattcttg ctttgcttat agctacaatt tttggaacta
    12841 taggcggagt tatggctaca agtagattta aaattatcag agcctacact agaatttacg
    12901 tagagctttt tcaaaatgtt cctttggtaa tacaaatttt ctttttgttt tatgccttac
    12961 ctgttttagg tataaggctt gatatattta ctattggtgt attgggtgtt ggggcgtatc
    13021 acggagctta tgtaagcgag gtggttagaa gtggaatttt ggctgtgcca agaggtcagt
    13081 ttgaagcttc tgcgtctcaa gggtttactt atattcaaca aatgcgttat attatagtac
    13141 ctcaaaccat tagaattatt ttaccgccga tgacaaatca aatggtaaat ttaattaaaa
    13201 atacctctgt attgcttatt gtaggtggag ctgagttaat gcattctgct gatagttatg
    13261 cagctgatta tggaaattat gcgccggctt atatatttgc agcggtttta tattttataa
    13321 tttgctatcc tttggcttat tttgcaaaag cttatgaaaa taaattaaaa aaagcacatt
    13381 taacgagata aagggttgtt aatggaaaat gtttttaatg cacaaaatat tgaattttta
    13441 atgcaaggtt tatttctgac attaaaaata gccttagcaa cttgtattat ttcgattgtt
    13501 tttggaactt ttttagctat aactaaaaat tatggggata gattaagtaa atttttagca
    13561 gcttgctata tagatatttt tagaaatact cctttattat tatggatgct tgcagcttgt
    13621 tttgttctac ctgtattttt tggacaattt cctcaagctt tttggggtac tataggattt
    13681 tcactttata cgagttcggt tatggctgaa attattagag gtggattaaa ttctatacca
    13741 aaaggtcagt ttgaagcagc ttattctcaa ggttttggta aattttttac tcttttttat
    13801 attattttac cacaaacttt tagaaaaata atacctgctt tattatctca aattgtaacc
    13861 actgtaaagg atacagctta tttagcgggt ttaggtatag ctgaacttac ttataattca
    13921 aaaactatat tggcaaaact aacaagtttt gaagaaattt tagcgatgat aggtgttgtt
    13981 gcgggaattt attttataat atgtttttca ctttctatgt tggtaagata ttatgccaaa
    14041 aagacagctt acatttctta aaaaagctta tatttttata taagcttttt aaatttacag
    14101 cagtttttaa catttttttt attaaaatct tttgtattaa ttcataattt tattgattaa
    14161 ggttttttat gcgaggttat aaaatttttt caggctcagc taatgtcgaa tttgcaagac
    14221 aagtttctaa atatctctcc ctgcctttaa gtgatgctgg agtaaagcgg tttagtgatg
    14281 gagagattag tgttcaaatt gatgagagtg tacgcggaaa ggatgttttt attattcaaa
    14341 gtacttgcgc tcctacaaac gataatttaa tggaactttt aattcttaca gatgctttgc
    14401 gtcgctcaag tgcaaattca attacggcta ttatcccata ttttggctat gcgagacaag
    14461 atagaaaagc aaatcctaga gtgccaatta ctgctaaact tgtggctaat ttgattcaag
    14521 cagctgggat tgatcgcgta gctacgatag atttgcatgc aggacaaatt cagggttttt
    14581 ttgatattcc agtagataat ctttatggaa gtatagtttt taatgattac attaaagcca
    14641 aacattttaa aaatgctatt ataggaagtc cagatatagg gggtgttgca agagctagga
    14701 gtgttgcaaa gcatttagga cttgatatag ttatagttga taagcgtcgt gaaaaagcca
    14761 atgaaagtga agtaatgaat attattggag atgtaaaaga taaagaagtt atcttagtgg
    14821 atgatattat tgatactgct ggcactatag ttaaagccgc ggaagcttta aaagaaaaag
    14881 gtgcaaaatc tgttatggct tgctgtactc atgcagtttt aagtggaaaa gcctatgaga
    14941 gaatagcaag tggagtttta gatgagcttg tggtaacaga tactatacct ttaaaagagc
    15001 aattaccaaa tattaaagta ttaagcgtta cacctgtttt tgctgaagta atacgtcgtg
    15061 tttatcataa cgaaagtgta aattctctct ttatttagat taaaaaagct taaagattat
    15121 ttttaagctt ttcattttta tgctacttaa agaaacaaaa aacatatatt tttttaaaaa
    15181 tgtgaaaaaa ctaaacatct ttctatataa tttaatctat aaatctgcta ttctttgaaa
    15241 atattttatt ttcttaggag aaatatgact cagttaagta ctaaaatttt atggttgttt
    15301 gttgcaactt taggcgctat ttgttttggt tatttagctt tacaaaatgg cgaaagtgta
    15361 tcagcgattt atttggtggt tgctgctgta tgtatttata tgataggata tagattttat
    15421 gggcgttttg tagcttataa ggttttagaa cttgataaaa atcgtgcaac accagcactt
    15481 gtagaaaatg atgggcgtga ttttgtgcct acaaataaag ctgtattatt tggacatcat
    15541 tttgctgcta ttgcaggagc aggtccatta gtaggaccta tcttggccgc tcaaatggga
    15601 tatttgcctt ctatgctttg gattttagta ggaggagttt tagcgggtgc tgtgcatgat
    15661 tttgttgttc tttttatatc tactcgtaga aaaggtagaa gtcttggcga gatgattaag
    15721 gatgagatgg gtaaatttac aggtggagtt gctatggtgg cgatttttgg cattatgctt
    15781 attattattg ccattttagc tatggtggtt gtaaaagctt tagcagaatc tccatggggt
    15841 ttatttacta tcgcaatgac tattcctata gcaatattta tgggcattta tatgcgtttt
    15901 atccgtccag gtagagtagg ggaggcttct ataataggtt ttgtgctttt aattttggct
    15961 attcattatg gtagcgttat agctgctgat ccttattggg ctaaaatatt tactttagaa
    16021 gctccaattt tggcaattgt tatgatggct tatggtttta ttgcttctgt tttacctgtg
    16081 tggtttttac ttgctccaag agattatctt tcaacttttt tgaaaatcgg tgttattgtg
    16141 gtaatggctg tagctattgt tttggttgct cctgatttac aaatgccaaa agcaaatact
    16201 cagtattttg atggaacagg tccagtattt gcaggtggag tgtttccatt tttatttatt
    16261 accattgctt gtggtgcgat cagtggtttt catgctttga tttctagtgg aactactcct
    16321 aaaatgcttg aaaacgaaac tcatgctttg gctgttggat atggctctat gcttgctgag
    16381 agtgctgtgg cgattatggc tttaatttgt gcttgtattt tacatccagg tctttatttt
    16441 gctataaatt caagctctgc tttgatagga acagatgttg taaatgtagc acaaactatt
    16501 tcaagttggg gatttagtat tactcctgaa gaaattacta ctttaaccac aaatatagga
    16561 gagcatacta tactttcaag aacaggggga gccccgactt ttgctatagg tgtagctttg
    16621 atcttacatg aactttttgg cggcgtggat ttgatggctt tttggtatca ttttgctata
    16681 ttgtttgaag ctttatttat tttaacagcg gtggatgctg ggacaagggc ttgtcgtttt
    16741 atggtgcaag atatattggg taatgtttat aaacctttag gagatattca taattatcca
    16801 gctggacttt tggctacggc tttaagtgtt gcaggttggg gatattttct ttatcaaggt
    16861 gccattgatc ctaagggagg aatttatacg ctttggcctc tttttggcgt gagtaatcaa
    16921 atgcttgcgg gtatggcttt acttcttgct acaactatac ttgtaaaaat gggcaaggca
    16981 agatatactt gggttacttt agtacctgcg gtatttgtct tagtggcaac tctgtatgga
    17041 ggaattcaaa aaattatgcc ttatgaagaa ggcaataaag tagcaaatgc ggtaagtcat
    17101 gtagccgccg ttagcataca aagtcaaaaa attaaagatt tagaatttaa attaaataat
    17161 actaaagatg aaaaagaaat ttctgtaatt aaaaaagaaa tttcaatagc cactcaaaat
    17221 aaagttggaa atttacttaa tgcaattctt tgtgtgttct ttatgatagc taccttgctt
    17281 gttataattt cttgtatagg aatttgctta ggtaaaatta aaattcctct taaagaaact
    17341 aagtatatta agattgatga atttcaaaaa atttaagtat tattatgaaa aagccgaaag
    17401 gttttttcat cccttggtgg gactttctag ttatgataag tatttagaac acatgaaaca
    17461 aaaacatcca ggaaaaattc caaaaaccag aggggaattt ttcaaagaat gtctagataa
    17521 aaaatataat agtggcggtt taaataaatg ctgataagct taaaggataa agttttatca
    17581 tacaaaataa gctttaagca tttaaaaagc catgaattct tttaagttct tcactaatag
    17641 gctttttctt tccatctctt gtaacactta cataagttac taaagccgaa gttacattaa
    17701 tgcaagaagt acaaccttga gaatccactc tttgagctgt gacttctact tcaacgctga
    17761 ttgaagtgtt gcccacattt acaactttag agtaacaaga aattatatcg cctataaaaa
    17821 caggttcttt aaaaactact ttatccatag agatggttac aacgcgttca ggagaaagtt
    17881 ctcttgctgc gatagctcct gctaaatcga tttgtgaaag tatccatccg ccaaaaatat
    17941 ttcctgctgg atttgtgtca cttggcatag ctacaatttt taattttggt tctcccatat
    18001 ctctcatttt tactccttat tttaaaaaat gaattataat taaaaaagtt aaaaaggaga
    18061 ataaaagtat gaataatttt aaagaaatag ctaaattggt tagaaaatac aaagaaagaa
    18121 ataatgcgtt atatgagttt ttagacaaag aagatgtggg cgagtatttt agatctttga
    18181 tttctttaag tgagttaaaa caagataaga caactatgct agccatactt aggcgtttgg
    18241 ttgatttaaa ggaagaaaat ttagttcaag agtggaaaaa aaacaacttt aaggaagata
    18301 agattataga gttaaaacat aagttctatg aagaggttag aaagttttat gaaaaagaac
    18361 atcaaaattt aattaatgaa ataaaagaga aaaaactttt aaataatttt tatcagtcct
    18421 taatacaagg agtgcataat ataggtttaa ttatgaatat ttttgaaatt tcttggacta
    18481 aagaaattat agaaaaaaat aataaaattt tatctactca atttccaaat ttagatgatg
    18541 caatggaatt tttacgtaaa aatcatttat atcaaaaaac tccagaagga gaaatttgtg
    18601 agcgaagcta tggtgtttta gttagaatag gaaatttatg gaaatttgtt ccttatgcga
    18661 gatttttcga gaatgaaatt ttaaaattag aatttgcttt tgaaaatatg attgatcagc
    18721 ttaaaatatt tgctagcagc gaagaggaaa aagcttatat agaatatttt gaaaaattaa
    18781 aattagcgtt ttgtgaaaaa gatgaagata gggttataaa agcttggcaa gaagctgaat
    18841 ttgcttggat gaaagtaaaa tcacctttac aagtgggaca tcccttagaa tattatgaag
    18901 ataattatac tcatgcggtg gcattagaat gggatataag aatagaagat gaaaatgatt
    18961 ttgatgtttt gaaatttggt aatgaaatta aggaaagttt tgaacatgtt tataaaaata
    19021 taggacttga agattgtgaa ttagaaaaag aagttttatc taatatagaa aaaactcaac
    19081 tttatatttg cactccgatg atattttatg gtgctgaact taaaggttta ttctcagctc
    19141 aagtcgttcc aaatgatgag tttgtaagtt ctaaggcggg caaaaaaata tttgccttta
    19201 taaattttgt atatgaaaat gctaaaacaa agccttttat gaaaatttct agcgaggttt
    19261 ttgataaaga atttttggat tttggaagaa atattttatt ttatcaggaa aaaatttgga
    19321 aaagggttta tgaagtatca actataggcc atgaatttgg tcatatattt tttattgcta
    19381 atgataccga aaaaacaatg aatcagagtg gtttttttaa aaatatagaa gaatataaag
    19441 ctactacagg tggacttata aatttctttt atcatgaaca agatgacttg ataatgcctg
    19501 tttttcatga acttataaaa agagctattg gacttatttc ttggcaaagg gttgatgaag
    19561 ttagacctta ttatacggaa ggacttattc atcttagctt gctttttgaa agcgaagtat
    19621 tgatttttga aaataataat ttgaagataa attttgattt aaggtattat gaaaaattta
    19681 aagagctaac tttaaaaaat tatcatgaat tggcaaaaca ctatgcttta agacttgatg
    19741 caaaagagtt tttaagtaga ttttgtgaaa ttgaagataa tatttttctt cctattatgc
    19801 ctaagtgtaa agaatttgtt aaattttatt atgatttata cgagaaaatt ggtaatgaaa
    19861 ttgataatag tggagaattt gaaagatata agaaaaaata ataaagtttt ttgaaaaaaa
    19921 cttaaaaaaa gctgtttttt acttgatatt gttttttaaa tatgctaaaa ttaggcgttt
    19981 caattaaaac aaaggagctt ttatgactaa agcagatttt atttcattag ttgctcaaac
    20041 agctgggcta acaaaaaaag acgctactac tgctactgat gcagttattt ctactattac
    20101 tgatgtttta gctaaaggtg atagcatcag ttttattggt tttggtactt tttcaactca
    20161 agaaagagct gctagagaag ctagagtacc aagcacagga aaaacaatca aagttcctgc
    20221 tacaagagtt gcaaaattta aggtaggtaa aaaccttaaa gaagctgttg caaaagcaag
    20281 cggcaaaaag aaaaaataaa acttcggcta gataaattct agccttcttt cttaattgat
    20341 ccagatattt tatatctttt atttacttta tttttttaaa cttttataaa actatcatta
    20401 ttaaataaaa aaggatatta aaattatgaa agtatatgaa aaagtaagtg agcttatagg
    20461 aaatactcct attatacatt tgaaaaaatt tggtatcaat gtttttgcta aatgtgaatt
    20521 tttaaatcct agtcattcta taaaagatag agcagctttt gaaatgatta aagatgcttt
    20581 agatagtaaa aaaattaatc aagatactac aatagttgaa gcaactagtg gaaatactgg
    20641 aatttctttg gctatgattt gtgcagattt gggacttaaa tttattgctg taatgcccga
    20701 atctatgagt ttagaaagaa gaaaaatgat aacactcttt ggcgctaggt tagaattaac
    20761 tcctgcaaat ttaggaatga aaggagcggt tgataaagca aatgaaatat tattaaatac
    20821 tccaaattct tttatggttt ctcaatttga aaatatttca aataaaaatg cgcatcgtaa
    20881 gaatacggct ttagaaattt taagagattt ggataatgaa cttgatattt ttgtagctgg
    20941 ttttggaact ggcggtacta ttagtggagt tggggaaata ctaaaagaaa aattagaaaa
    21001 agtgcatatt gttggagtcg agcctctaaa ttctccattg cttagcaaag gtgaagcggg
    21061 aagccataaa atacaaggaa taggggcgaa ttttatacct gctattttaa ataaagaagt
    21121 tatagatgaa gtgatcacag taagtaatga agatgctata aatacagcca aagaacttgc
    21181 caaaagtggt ttaatggtag gtatatcaag tggagcaaat gtatttgccg caagtatgct
    21241 agcaaagaaa tttccagata aaagaatttt aactatgcta aacgatacgg ctgaaagata
    21301 cctctcaact gatctttttg cttaagtata attattgaga atttagaaaa attctaagtt
    21361 ctcttaaaat ttcttgtgga tttaaatcgc taatttcttt ataaaaatga cctttttcat
    21421 caataagata aagcatattg ctatgtgcta tagaataacc cataaaagaa tcatttagat
    21481 ctattttttg atattgaaca ttatattgtt ttgttatttt ttgaagagtt ttttcatctt
    21541 ttgcaattaa ggcatctgct tttgggtaaa agtatcgtaa ccattcgttt gtattgctta
    21601 agttattatc tctatttgga tctaaagaaa taaaaagaag gtgagcctta ggattattga
    21661 tttgctttaa ggctttgcct actaaactaa gagttgccgg acaaacatca gggcaataag
    21721 tatatccaaa atagataata agcttatctc ctttaaaatc ttttagggtg gtttcctctt
    21781 ttaagtctga ttttaagata aaatcataag aattttgatg atttttaata aaaaatatta
    21841 cacctaaaat aatggcaact ataactataa acaaaataat attttttttc atttttttag
    21901 ctcaaaatca aaataaaacc ctatgggttt attattatcc ataaattcta ccctgaaacg
    21961 catagtatct aaaacgcaag cagcaagaac tattttactt tcatagtctg ttgaatttaa
    22021 tcgatgtatt ttaggtttaa tttcgcccat atacatattt aatccataaa ttttaattcc
    22081 taagttgtta taatttccta gatttacaat ctttagattt gtaacatcta aagattgtaa
    22141 gggtttggga tttagggaaa ttaagacttt tttattgtta aaactatatg tgcagtcttt
    22201 aacattaaga tcgcaagtca atggggtaga aaaatcagtt tttgttattt tttgagaatc
    22261 ttttattaca taaaaatcaa aaataatata taaaatagca ataacaaaag caaaagctag
    22321 gataaaaata atttttctca ttaattaaaa ttctttagaa tcaatatttt ttaactctat
    22381 ggttttgtga ttattaaatt ttaaatctaa atttaccttc gtgtctttaa taataggttt
    22441 ttttagtttt aaaagcatta tatggtaacc tccagattta agctctgtgc ttgaatgagc
    22501 ttttataata atttcaggaa ttttttgcat catcattttt ccatctttat gtatatgtgt
    22561 atgcagttca ctgacttcac tgatatcgct tttggcactt attagagcaa tatccttatc
    22621 agtattatta aaaatagtaa gaaaaatagc actattttgc gcatgaggtg gagtttgttt
    22681 tacaaaggca ttttttacct ctatatcatt aacagcccaa agatttacag caaaaagagc
    22741 acctaagaga agaatttttt tcatattgta tccttatttt tataatatta aatatttgtt
    22801 cattatatca aaaaatattt ttatttgaat ataaaatttt gaa
//
LOCUS       DARATF010000018        22578 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.018, whole genome shotgun sequence.
ACCESSION   DARATF010000018 DARATF010000000
VERSION     DARATF010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22578
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.018"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..507
                     /locus_tag="SB502_000520"
     CDS             <1..507
                     /locus_tag="SB502_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433995.1"
                     /translation="SEFSNKSDEEKIMFFQEFLEDLVKAFDIEPPIPTIYKEFKQYNN
                     GSYNSVGKKALYLNLKNKKEQILSTFFHEFRHFYIDKNNSKEIKNQHTESIFKLIYSN
                     GYFKFENVVMFWAYDKKCIISNNYTDCVGVKPYKYSIFSDKPAIYWFSPSERDARIST
                     FYFEKYRG"
     gene            488..1771
                     /locus_tag="SB502_000521"
     CDS             488..1771
                     /locus_tag="SB502_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433996.1"
                     /translation="MKNIEVDMLEVAIKNIFKHKDFLQTRKEPYAIYLAINTNIKSYN
                     NICPSEKYFWKFNDMNELECYNPKFGIYLGKIVFDKKGNKLIPKYIPAKFENLEEEVK
                     KIKNPLWLANKNPNYIKPKFYDGMGGGYYFESPNNLEYQCKIEKDTQILSQEQIISYV
                     KELYSKNTMIIKNYIDAINKNHGIKPFVFSDEIYDQLGEVGILTKEQANNFKDKSYIK
                     KNPILLAMLDYLAKQNKKDEDYLITFDDEYFYAYLVWSLKDFLLELSYGLFQDETKLL
                     FNPAAYMDDTKIYYKNLNEEINKRYEKILLDMGFEGENGYFNDYYDYSFGNNGIFKFN
                     IYDYFAYDEIGVQPIQQSPYVSPRSPFDSPNFVYSDGNYHGDAKLIPSALGKYYFELS
                     YQKGVYIELLRPYYPSIKDLPEGWDNKMLEKANLK"
     gene            complement(2841..3290)
                     /locus_tag="SB502_000522"
     CDS             complement(2841..3290)
                     /locus_tag="SB502_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0433997.1"
                     /translation="MVIFCAALALLLFLGVIAYLIISDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEAAKKKLEFVSA
                     LAANINASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(3306..6551)
                     /gene="ccsA"
                     /locus_tag="SB502_000523"
     CDS             complement(3306..6551)
                     /gene="ccsA"
                     /locus_tag="SB502_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEG0433998.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNKNKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELADQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQ
                     SSYDQDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLK
                     HTSVIIFILLLSFGSEKTFAQDLNSTLPVVNTNHAKALATLIVQKSADGRMVPFDTLS
                     REILEKIHQSDSYKGQNSNAVMLSMLVDVDKWQMEPFILMPQNQAVRDAVANILEIPS
                     AKYISYKDFFDENNRYKLQKYVENANRKNPNARGVFDKEIIKLDERANVVNLVFSGEL
                     FKFIPVQNNPNNVWFAPFSAVTTLKGDEGHIVLALIQNYFSAVENAFKDGNWIRADEG
                     LKFIKEYQEKIGYKVMPSKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLILVFSKMVV
                     PNLKISFIFKVVYVLNVLAFVIHTVGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGI
                     FFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGF
                     LGLCALLGIFTLFLMCFLKKDGKYNLNILRNITEATRINEMAMIFGLCLLTVGNFLGA
                     IWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIM
                     TYFGVNYFLTGLHSYAAGEAAQIPNYVYWGFALMVVLAFFARRKRNFVGKL"
     gene            complement(6569..7264)
                     /locus_tag="SB502_000524"
     CDS             complement(6569..7264)
                     /locus_tag="SB502_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0433999.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(7251..8021)
                     /locus_tag="SB502_000525"
     CDS             complement(7251..8021)
                     /locus_tag="SB502_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434000.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
     gene            complement(8018..9070)
                     /locus_tag="SB502_000526"
     CDS             complement(8018..9070)
                     /locus_tag="SB502_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEG0434001.1"
                     /translation="MMVRIKVSHLIFLIASIIFIFISPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYCEL
                     SDVIRGIKKRFKRSKK"
     gene            complement(9070..9966)
                     /locus_tag="SB502_000527"
     CDS             complement(9070..9966)
                     /locus_tag="SB502_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEG0434002.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYSSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(9985..11094)
                     /locus_tag="SB502_000528"
     CDS             complement(9985..11094)
                     /locus_tag="SB502_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0434003.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSALSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(11116..12231)
                     /locus_tag="SB502_000529"
     CDS             complement(11116..12231)
                     /locus_tag="SB502_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0434004.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDSFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLAAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNNPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNACVGNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(12262..12696)
                     /locus_tag="SB502_000530"
     CDS             complement(12262..12696)
                     /locus_tag="SB502_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0434005.1"
                     /translation="MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(12705..12896)
                     /locus_tag="SB502_000531"
     CDS             complement(12705..12896)
                     /locus_tag="SB502_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HEG0434006.1"
                     /translation="MKKIFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTHRYQNKTQTEITIK"
     gene            complement(12949..13455)
                     /locus_tag="SB502_000532"
     CDS             complement(12949..13455)
                     /locus_tag="SB502_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HEG0434007.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(13464..14495)
                     /locus_tag="SB502_000533"
     CDS             complement(13464..14495)
                     /locus_tag="SB502_000533"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEG0434008.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAIVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVI
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(14495..15796)
                     /gene="flgR"
                     /locus_tag="SB502_000534"
     CDS             complement(14495..15796)
                     /gene="flgR"
                     /locus_tag="SB502_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HEG0434009.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDEN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASV
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFVAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYNFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGMDIKILNEKIKKYQIKDK"
     gene            complement(15853..16302)
                     /gene="flgQ"
                     /locus_tag="SB502_000535"
     CDS             complement(15853..16302)
                     /gene="flgQ"
                     /locus_tag="SB502_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HEG0434010.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDLKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GARISVKDIVNTDLLRAQSETYVKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(16278..16793)
                     /gene="flgP"
                     /locus_tag="SB502_000536"
     CDS             complement(16278..16793)
                     /gene="flgP"
                     /locus_tag="SB502_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HEG0434011.1"
                     /translation="MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(16861..19449)
                     /gene="gyrA"
                     /locus_tag="SB502_000537"
     CDS             complement(16861..19449)
                     /gene="gyrA"
                     /locus_tag="SB502_000537"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HEG0434012.1"
                     /translation="MENIFSKDSDIELVDIENSIKGSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDSKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFATGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDL"
     gene            complement(19490..20065)
                     /locus_tag="SB502_000538"
     CDS             complement(19490..20065)
                     /locus_tag="SB502_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEG0434013.1"
                     /translation="MRCINCGAFALLCFCELCELELSEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNHIKYSGKSLEFRQKHKRNYKLLKTIHEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADAKV"
     gene            complement(20062..20706)
                     /locus_tag="SB502_000539"
     CDS             complement(20062..20706)
                     /locus_tag="SB502_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434014.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPG
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDAIGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(20783..22564)
                     /gene="lepA"
                     /locus_tag="SB502_000540"
     CDS             complement(20783..22564)
                     /gene="lepA"
                     /locus_tag="SB502_000540"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018712474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEG0434015.1"
                     /translation="MRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIE
                     KERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQ
                     GVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAK
                     TGVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSIAKNDE
                     VLVMSTDKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITLVKN
                     KAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSLALGFG
                     FRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGEFIKIQNPSELPPVNK
                     IDHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPLNEIVM
                     DFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQSKGRE
                     LVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRKLLEKQ
                     KEGKKRMKAIGKVNLPQEAFLSVLKID"
BASE COUNT         7885 a         4158 c         2757 g         7778 t
ORIGIN      
        1 agtgaatttt caaacaaaag tgatgaggaa aaaattatgt tttttcaaga atttcttgaa
       61 gatttggtaa aagcttttga catagaacca ccaattccaa ctatttataa agagtttaaa
      121 caatacaata acggatctta taatagtgta ggaaaaaaag cattatattt gaatttaaaa
      181 aacaaaaaag aacagatatt atcaactttt tttcacgaat ttagacattt ttatattgat
      241 aaaaataatt ctaaagaaat aaaaaatcaa catacagaaa gcatttttaa actcatatat
      301 tctaatggat attttaaatt tgaaaatgtt gttatgtttt gggcgtatga taaaaaatgc
      361 ataattagta ataattatac agattgtgtc ggagttaaac cttataaata cagtatattt
      421 tcagataagc ctgcaattta ttggttttct ccaagtgaaa gagatgcgag aataagcaca
      481 ttttattttg aaaaatatag aggttgatat gttagaagta gccataaaga atatatttaa
      541 acataaagat ttcttacaaa ccagaaaaga accttatgct atttatttag ccataaatac
      601 aaacataaaa agttataata atatttgtcc tagcgagaaa tatttttgga aatttaatga
      661 tatgaatgag cttgaatgct ataatccaaa atttggcata tatcttggta aaattgtttt
      721 tgataaaaaa ggcaacaaac tcatcccaaa atacataccc gctaaatttg aaaatttaga
      781 agaagaagtt aaaaagataa aaaatccttt atggcttgct aataaaaatc ctaattatat
      841 taaacctaaa ttttatgatg gtatgggtgg gggttattat tttgaaagtc caaataattt
      901 agagtatcaa tgtaaaatag aaaaagacac tcaaatttta agccaagaac aaatcatttc
      961 ctatgtgaaa gaactttata gtaaaaacac aatgataata aaaaattata ttgatgcaat
     1021 caataaaaac catggcataa aacctttcgt atttagtgat gaaatttatg atcaattagg
     1081 agaagttggc attcttacaa aagaacaagc taataatttt aaagataaaa gttatattaa
     1141 aaaaaatcca atattgcttg ctatgcttga ttatttagca aaacaaaata aaaaagatga
     1201 agattattta atcacttttg atgatgagta tttttatgct tatttggttt ggagtttaaa
     1261 agatttctta ttagagcttt cttatggttt gtttcaagat gaaaccaagc ttctttttaa
     1321 tcctgcagct tatatggatg acacaaaaat atattataaa aatttaaacg aagaaataaa
     1381 taagcgttat gaaaaaatat tgcttgatat gggatttgaa ggagaaaatg gttattttaa
     1441 tgattattat gattatagct ttggcaataa tggtattttt aaatttaaca tatatgatta
     1501 ttttgcttat gatgaaatag gagtgcaacc aattcaacaa agcccatatg tttctcctag
     1561 aagccctttt gatagcccta attttgtcta ttctgatgga aattatcacg gagatgcaaa
     1621 gcttatccct tctgctttag gaaagtatta ttttgagctt tcctatcaga aaggagttta
     1681 tatagaactt ttacgccctt attatccaag tataaaagat ttaccagaag gttgggacaa
     1741 taaaatgcta gaaaaagcta atttaaaata aatatgagca tccgtgaata aacccttcta
     1801 caaacttaaa agattttata taccttgtgg tatgcttata gctttgatta ttttataagc
     1861 ttaacttatc attttttaca acgaccttta gagcttatct tttgggatag atatgatata
     1921 tcgaaattat ctattaataa cgaagagaaa aattttaaaa caatgaaaac tgtgaattac
     1981 tcctactttc gctaacgctt agaagtagga gcttcctaac taaagccaag tattcttagc
     2041 tagctcgaaa ggcttcttgt ttatagctta cacctaaatt ttcatataaa atattaaaac
     2101 ttatacaaaa atctttcata aattgtttca gaagttaaag agtttgtttg gtaaattaca
     2161 ttaagggttt aagccgcagg ctgaccccct acggctaaat tgtgaaaccc ctgaaaggag
     2221 gtaaactcaa tgaggctcat aaaactcatt ctagtggtta ttatactgct ttgtttattt
     2281 atagtcaagg catattaacc aagcgccatt ttggggaaac tagagtgggt tacctgcggt
     2341 atcaaacaaa cttttaacca agcttatctc ctttatattg aattatttta ttttttaatt
     2401 tatatttttc ttgcttatac taaaagataa gattcaatta taaacaaaat gtattaagaa
     2461 gctaaagagt ttgtttggta taattataaa aggtagatgc caaagggctg caacccttta
     2521 gcgttaattt accgcccaga agggaggtga ttaaattgct aaacaaaatt atagtaataa
     2581 ttatactact ttgtataatt atagtcaagt gttattaata cttgatttcc cattttttaa
     2641 aggggagcta taattttccc tttggcttac caaacaaact tttaactaaa cttctcttct
     2701 tctattgatt ttctatattt gaaaaatttt attttttaaa aagtatatgt taaagtatat
     2761 gttttttgta ttattaattt ttcaagtatg ttcttttggt tattttaact ataaatcaca
     2821 gtcctcttga gcgcaccata ttatttatct tctttaattt ttcttttagc taatcccata
     2881 tgctcgtaag catcaatttc ttttttgtaa gatccagaaa ttttcttaag ttctttattt
     2941 aagtaactta ctgtttgtgc acttgcatta atatttgcag ccaaagcaga aacaaattct
     3001 agtttctttt ttgctgcttc atctaattct ttagaagttt ttgaaccaag tttatgtgtc
     3061 tgcacataaa gtttggcaag ttcttttaat tcaatatccg ttagtttaac atcggaagca
     3121 gcaattatca ttttatctaa gtctgtatca aattttttag tcttttcagc tacatgctgc
     3181 ttttggctag ttttttgctt tttaattgtt tttttgccat cacttataat aagataagca
     3241 atcacgccta aaaacaataa aagcgctaaa gcagcacaaa aaataaccaa aaaaatatgg
     3301 ttcatttaaa gtttgcccac aaaatttcgc ttccttcttg caaaaaaagc taaaaccacc
     3361 atcaatgcaa atccccaata aacataatta ggaatttgag ccgcttcgcc tgcagcgtaa
     3421 gaatgaagtc ctgttaaaaa gtaatttact ccaaaataag tcataataat aacccaataa
     3481 gcaaacatac tccataaagc aaacacaaat tgattacaat attttggaat cattctaaga
     3541 tgcaaaattg ctgcataaac caaaatgcta actaaagccc aagtttcctt agaatcccaa
     3601 ctccaatatc tcccccaact ttcatttgcc caaattgctc ctaaaaaatt tcctacagta
     3661 agcaaacaaa gtccaaaaat cattgccatt tcattaattc ttgtagcctc tgtaatattt
     3721 ctcaaaatat taagattata ttttccatct ttcttaagaa aacacattaa gaacaatgta
     3781 aagataccaa gtaaggcaca aagtcctaaa aatccataac tagcagtaat aacagataca
     3841 tgaatactaa gccaataaga attaagcaca ggaacaagat ttgtaatttg cggattcatt
     3901 tcgcttaaat gcgcaaccat taatacaaca ccagataaaa tagaagttaa tgacaaggct
     3961 ataggacttt ttctggagaa aaatataccc gacaaagaca atgcccaagc tatatacacc
     4021 atactttcat agccattact ccatggagca tgacctgata aataagcacg aagtccaaga
     4081 cctactgtat gaattacaaa agctaaaaca tttaaaacat ataccacttt aaatataaaa
     4141 gagattttta aattcggtac gaccatttta gaaaaaacaa gaatcaagag taaaaaaccc
     4201 gcaattaaat atacaggagc gagtttaacg aaaatttcag ccttattaga aaaaatttcc
     4261 atttcaacct tggttttact aggcatgact ttatatccta ttttttcttg atattctttg
     4321 ataaatttca agccttcatc agctctaatc caattaccat ctttaaaagc attttccacg
     4381 gcactaaaat aattctgtat taaagccaaa acaatatgcc cttcatcccc cttaagagta
     4441 gttacagcag aaaaaggtgc aaaccaaaca ttatttggat tattttgaac aggaataaat
     4501 ttaaataatt caccactaaa aactaaattt acaacattag ctctttcatc tagttttata
     4561 atttccttat caaaaactcc tcttgcattt gggtttttac gatttgcatt ttcaacatat
     4621 ttttgaagtt tatatcggtt attctcatca aagaaatctt tataagaaat atatttagca
     4681 ctaggaattt ctaaaatatt tgcaacagca tcacgaactg cttgattttg tggcattaaa
     4741 ataaaaggtt ccatttgcca tttatctaca tcaacgagca tggaaagcat aacagcgtta
     4801 gaattttgac ccttatagct atcactttga tgaatttttt ctaaaatttc tcttgatagc
     4861 gtatcaaaag gcaccattct tccatctgct gatttttgaa ctattaaagt ggcaagagct
     4921 ttagcatgat tagtatttac cacaggtaag gtcgaattta aatcttgagc aaaagtcttt
     4981 tcagaaccaa aagataacaa taaaataaaa ataatcacac ttgtatgttt taaagtgtct
     5041 ttattaatta atcttgccaa agttctaaat ctagaatgtg gatttaaaaa attcataaac
     5101 attccaagac aaagcagaaa ataacctata taagttggta ttttgcccgg atctttattt
     5161 acagataaaa cagtcccttt ttcatcttga tcataagaac tttgataaaa tctatagcca
     5221 tcataatcta aaacattatt cataaaaatt ctataatcaa aattttcatt attatttttt
     5281 acggtaattt cacttgcata agaagctgga gacatagaac ctggataacg atctaataca
     5341 aaatctctta aataaatatc aaaaggcaat tgttcataag aaagcgccca agaaataaag
     5401 aatttttgat ctgcaagttc tatcataata ggtttattat attcaaaaat ataaaattct
     5461 ttactttcat ttttatagct taattctaat tttaaagcat tagagccagt taattctaag
     5521 tttttattct tattgcttaa ggcaaaatct ttaaaatgca ataataaaga atttttccaa
     5581 ttttgaggct cgccaaaagt agaaatcaac atagttctac ccacttctaa ccaagcagat
     5641 ttaaaccata accaaaaact ttcatcttga ggtctattgg agccttctaa agcttcttgc
     5701 gcatgcaaag aagcagcttt aactacaaag ctgatatcat taatttcata gagtcttctt
     5761 tccttagcat ttgccttttc tccaatttta aggtctaaat tttgtccatc tagcatactt
     5821 agaaaatgta agttttcact tgaacttaaa gttaaatttt catcaatttt tacaaaaggt
     5881 gctttaacat tatcattcat aaaagcaaag ttaacccctt ctatattctt aacttcacct
     5941 ttttcaaatt taacatcaac accttgagat cctttttgag aaagcatcaa aaccaataaa
     6001 ggatcagaat tattattttc tttataagta taatgagcat ttaagattaa atctttatat
     6061 tttaatacag cttgatcatc acctaaatta agttttagtt taaaagaatt agcaaaaggc
     6121 aaatttccta tataacgatc attaaccgca ctatagcgtt ctccatcttt tatagcagaa
     6181 atacgcaaag aagtcttaga actttctata agtgaatttt gagtatgctc tctaataggt
     6241 aaaatacctt caaaaccagc atatcttgtc attgcagaac ccactaaaat aaataaaaaa
     6301 gaaatatgaa aaatcattaa aggtaatttt ttaagcccaa acattttata acgaaacatc
     6361 ccgcatagta aattaatacc aagtaaaagt tgtatatatt caaaccaaaa agtatcataa
     6421 accattgccc aagccgtagg agttccataa gcactttcaa taaaagttgc caaagcacaa
     6481 aaaagcgcaa aaagcaaaaa caatacaacc gaaactctta aatcccctat gctttttatt
     6541 atatttttca ttctttttcc tttaaatttt aaagccctaa atatttcttt ctaatctcat
     6601 catcacctat taaattttta gcctcgtttt ccattacaat gcgaccattt tccaaaacat
     6661 aagcataatc acttattttt aatgcagaat aagcattttg ctctaccaaa agaatagtta
     6721 taccctcttc ttttaaacgc acaataatat caaaaacttc acccacaatc tttggagcaa
     6781 gtcccaaaga aggctcatcc aacatcaaaa gttttggttc actcattaaa gcccttgaaa
     6841 tcgcaagcat ttgcgcttcc cctccactca atgttccagc taaagcatgc tttttacttg
     6901 caagtcttgg aaaaagttta tacatttgct ctcttaaatg ctcataattt tcagcattat
     6961 taaaagcacc tatttttaaa ttttcctcta cgcttaaatt aataaaaaca cgccttcctt
     7021 caggaactaa agctatacct ttttgaacta aagtatgagt taaatgcctt ttagtatcat
     7081 aacctaagaa attaacctca ccagttcttt taactgagtt taaaagcgca tttaaagttg
     7141 aagttttacc tgctccattt gaacctataa gagaaacaat atgacctgtt tccactttaa
     7201 aatcaatccc tttaacagct tcaattaatc cataataaac atgcaaatct ttaactatta
     7261 gcatcaaaat cccctaaata cgcagcaatt acttctttat gatttacagc atcgcaaagt
     7321 ttaccttcaa aaattgtttt tccataatca agtaccaata cgcgatcaca caatttattt
     7381 acaaatttca tatcatgttc tataagcaaa acgctaattt tataatcttt tcgtaattta
     7441 aaaatgagct cagcaagttc atcactctca gagctattca tcccagcggc tggctcatca
     7501 agcaataata atcttggttg agtagccatt gctcttgcaa tctcaacttt tctttgttgt
     7561 ccataactca agctagtagc cttttcatag gcaaattctg caataccaag ttcttctaat
     7621 attgcataag ccttctcttt aaatacttgt tctatttttc caaaacgccc taaatgcaaa
     7681 aaggcttcaa aaatattata tttcatttgt ttattaaaac caataagaac attttcaagc
     7741 acattcatgc ttgaaaaaag cctaatattt tgaaatgttc tagctattcc taaatgcaca
     7801 atcttatgag gttttaagtg atcaattctt tctcctagaa attcaaccga acctgaacta
     7861 ggtttatagt tacctgttat aatattaaaa agagttgttt tgccagcccc attaggtcca
     7921 attaaagcaa aaatttcacc ctcattgatt ttaaaagaag tttcattaat agccttaaca
     7981 ctaccaaaac tttttgaaat ttgttttaat tccaaaatca ttttttgctc cttttaaaac
     8041 gctttttaat ccctctaatc acatcactca actcacaata acccattatg ccttttcttg
     8101 caaaaagcat tactaaaatc agaacaatag aaaaaacaac cattctaagc cctggcgttg
     8161 attggatatc aagatttaaa gaatctattt ttatatttaa ctcatctaaa aatctaagcc
     8221 actcacttcc accaataacc aatatcgcac ctataatagc acctgtagta gaaccaagtc
     8281 cacctaaaac aataataatc aaaagctgaa aagtaagtaa aaaatcaaat tgagttggag
     8341 atacggtagt caacagacaa gctaaaagtc cgccacctac accttctaaa aatgctgaag
     8401 tgctaaaagc taaagttttt atccaaaaag tatttattcc catagcgctt gcagcatctt
     8461 catcatctct tatagccttc attgcacgac catatttaga ataaactata tttaaaatta
     8521 aaataaccgc tacaatagca ataccacctg tccaatagat cgtggaaaat tgtggaatat
     8581 ctaccagccc tcttgagcca ttagtaatag aaggaaaatt aatagcagct attttaataa
     8641 ttattccaaa gcctaaagtt acaatagcca aataatcccc tctcacgcga aatacagcaa
     8701 aagccaaaat cagggcaagt aaagatgaac aaattccagc cacaattaaa gctagaataa
     8761 aggaatttga atggatagct aaaataaaag aactaggacc atctaaaaaa aactgatcat
     8821 tttttgcatc agcacttaaa agaactaaag cagccgcata agctccaatc gcaacaaatc
     8881 cattgggttc tagtgaaaat tgtccagtta caccattaat aagattgtaa ctcacagcca
     8941 aaataataaa aatagcaatt tgattaacaa tgtttaatcc ataatcccca aaaatataag
     9001 gagaaatgaa aataaaaata attgaagcaa ttaaaaagat taaatgtgaa accttaattc
     9061 taaccatcat taaaacctac tcttttcaaa atttatacct aaaattcccg taggcctaaa
     9121 taacaatata aacaccaaaa aaataaaagc aaatgcatct ttaaagcctg ataaatctgg
     9181 aaaaaaagcc acaacaacaa cttcagtaaa tcctataata agtccaccca aaactgcacc
     9241 tactacagaa cctatacctc ctaaaactgc agcagcaaaa gcttttaaac ctattaaagt
     9301 tcccatagta ggttcaacag agtaataatt tgcagcccaa aaaacacccc caactgctgc
     9361 caaagctgaa cctagggcaa aaactatagc aataatacga tttgcatcta tacccattaa
     9421 atttactgtt tgtatatcaa atgccaaagc acgaatagct ataccatatt tgcttttata
     9481 caaaatccat aacactgcta ttaaaataac aaatgtaaga gcaggaacca ttaaagaact
     9541 ataagttgtt atcactccac caaaattaac actttcctca aaataacttg gcggtgtaaa
     9601 agttctaggt gttgaagtaa aaagcatatt aaaaagattt tgcaagaaaa aactaatacc
     9661 gattgctgta atcaacaatg aaattctagg agcctgtctt aaaggtttat aagcgattct
     9721 atctgtagct attccaacac aagcagcaaa aatcattgct aaagacaaag ctcctagaaa
     9781 aggaacattt agattagtca tgcaaaaaag agccgcataa gcaccaacca tcataatatc
     9841 gccgtgagca aaattaataa gtcttaacac gccataaacc atagtatagc caacagcaat
     9901 aagggcatac atactgccta aactaagtcc attaacaagt tgttgtaaaa ataaagtaga
     9961 atccataatc tttctatttt tcctttaagg attgataata tctttataat tttgcttctg
    10021 atttttaatt tctttaacca ctacagaacg agttgcattt cctgtttgat caatactgat
    10081 aacaccagaa acgccttgat aatttttagt ttggtgaatt ttttcattga cacacttact
    10141 agtaagattt tcaacgcaag cattcatagc atttagcatt acaaaatacg catcagcacc
    10201 catagctgaa aaatttggaa cttcttttgt tcccttagct ttttcataaa cactgataaa
    10261 ttctttgctt aattttgtag ttggattatt agcatcaaaa ctatctgtga aaatataacc
    10321 ctcgcttgca tctccagcta aactaataaa agtttgatca gcaactccat ctgcagaacc
    10381 cataggaata tttaaacctg cgagttttga ttgtcttgca aataaagaag cttcactata
    10441 ataaagcggt aaaaaaataa attctggatt taaactttta acttgagcta caatagctct
    10501 aaaatcttta tcacctgaat taactcttaa aattctaaga atttgaccac cattagactt
    10561 gtactgtttt tcaaaagctt ttgctaaacc taaggaatag tcagtgcttt gatctactac
    10621 aataacagca cttttgtaat taagttttga aaaaacatat tttgctaaag atgaaccttg
    10681 aaaactatcc ataaaacata ctcgagaaga atatattttt ttatcaagca atctatcacc
    10741 agttgcagca ggagcgatca atggaatttt attatcttct gctacgcgca taacttgcaa
    10801 tgtattagca gtaaccattt cccctataag gcctataact ttatcttgag aaactaaacg
    10861 atttgctcca ctcgaagatt ctaatttatc acctttagta tcaataatag caagagaaac
    10921 cttatctcca ttacttaaag ctgattgcat tgaatttgca agtttaatcc cttctagtgc
    10981 gctttgtcca tatgctgcag tagctccgct aagcggtaaa acaactccta ttttgacttc
    11041 cgcagcactt aaacttaaac ttagaatact tgctaaaatt aaactttttt tcattctcta
    11101 cctttatttt agtaattatg gatttataat tgttttataa ttttgttttt gattttgaat
    11161 ttctttaatc acaacagaac gaatggcatt accgctttca tctatgctaa tcacaccacc
    11221 aacagcttga aaatctttag tttgatgaat tttgctatta atacattcgc tgctaagatt
    11281 accaacgcaa gcattcatag catttaacat tacaaaatac gcatcagccc ccatagccga
    11341 aaatgctgga agttcttttg ttcctttaac tttctcataa gctgcaacaa aatcttttcc
    11401 taattgtgta gatggattgt tataatcaaa actatcagtg aaaattactc cattaacagc
    11461 acttccgcca agatctataa aagtttgatt gttaacacca tctcctgctg ctaaaagttt
    11521 atcaaaacca atttgtcttg cttgtctcgc aattaaagca gcttcaggat gataaatagg
    11581 catataaaca aaatcaggat ttaaactctt aagttgagaa accacagctc taaaatcttt
    11641 atctcctgaa ttaataacaa gtttttttat aattttccca ccattattct taaaagaatt
    11701 ttcaaaagct cttgccaaac ctaaagaata aacattgctt tgatctatga tgataacagc
    11761 atttttaagt cctaaatcct tagatacata agtagcaaat ttatctcctt gaaaactatc
    11821 tttaaaacaa actctacttg catatttctt tttatctagc aatttatctc cagatgccac
    11881 tggagctatt aggggaattt ttttctcttc tgctatagaa atagcttgaa tggtatttgg
    11941 agttgtagct tcaccaataa tcccaaggac tttatctgtt gctattaaac gattaactcc
    12001 atttgaagtt tcaagcttat ctccttttgt atctattgtg ataagtttaa taacatctcc
    12061 atttgaaagt tttggctgta gcttattagc cagttcaatt ccgttaaaaa catcttgccc
    12121 ataagctgcc acagttccag ttaaaggtaa aactactcct atattaatat ccttagcata
    12181 taagcaattt accatagtta aaacacttaa agttaaagtt agttttttca tagtattcct
    12241 tttaattata gtttttacat tttattttag aaatatatta tgttttgttt tttgcgcagg
    12301 ttcttcttca agaagatctt ttacttgcaa atcaagcgca aaatttccac ctttaatata
    12361 agcaataata ttatctatat cctcgtggct taaatttcta gcataaaaag ccatttgaga
    12421 agctgttgta gaactgctac tatcaagagt ataacctatc aaagctcctt taatatcctc
    12481 aggagacata tcttttaaaa ttctagatcc tataacactc ttttcagcat tatctccatg
    12541 gcaagtattg catttatttt gaaaatacaa agccttcgct ttttccatat catattgctt
    12601 atttgcatca aaggtataag taaaaaatga tttcaagtta ataccaaaaa gcgcaacaac
    12661 aaatattgaa ctaataaaca accagcgtgc aatcatgatt ttccttattt tattgtaatt
    12721 tctgtttgtg ttttattttg atatctatgt gtttttttgt tgtatttttt ttctttttta
    12781 atatcatagc gataacgaac agtccctgaa acttctatat ctttaaagac ttcatctaac
    12841 ggagctgcaa aaacaaaatg atttaaaatc ataccaatta aaaatatttt tttcattttt
    12901 attctttaaa cacaaaaaaa cgattatatc aaaaaaagat aatccttgtt aatgaccacc
    12961 tttgtgtaaa aaataaagtc ctacacaaag agctaaaatc gatccagcaa gaaaagccat
    13021 atccacagga gtagcaaatt tcatctgtaa aaccctttga aagaaattta ccactaagac
    13081 cataatgata acttttgcaa gcttgtcttt taattgatct aagctatgca cctctaaaac
    13141 cttgctttgt tttgtttgtt taaattcttc tatttcgctg ataaaaagct cataaactcc
    13201 aaaagaaaaa ataaacaaaa ctaaagccat aagataaaga tcaacagctc ctataattaa
    13261 agccaccaca tcctcatgca aatccacatt agaacctgca tcaaaaaaat aattataagt
    13321 ataaaatata acttttaaaa catcataact tgcaataaaa aacaatacaa aagctccaat
    13381 taaaccaaaa attacgggta aaattgtaac aatacgactt ctaacaagta aagattcaaa
    13441 tattttctct aacatttttt tccttattta ttttttaatt ctaaccattt ttgcgcaata
    13501 cgcacagcat ttgttgcagc acctacacga atttgatccg ccacacacca aagatggagt
    13561 atttttttat catacacatc agcacgaatt cttcctacat aagtttcatt agtatcgcta
    13621 gtcattaagg gcatagggta ttttttattt ttaggatcat ctatgacaat aacacttggt
    13681 gctttttcta aaatttcttt agcttttttt acatctattt ctttttcaaa atgcatagta
    13741 atggcttcgc tatgacttct taaaacaggc actcttacac aagttgccga aacttctaaa
    13801 tttttatgta aaattttttg agtttcattg accattttaa gttcttcttt agtgtaatca
    13861 ttatccataa aaacatcaat ttgtggaata agattaagtg ccaaagtata aggaaaagtt
    13921 tgaggttcaa attcatcaag tttaaaagca aaaaaacttt gcatggcttc aaccaattct
    13981 tgcattcctt cttttcccgc tccacttgca gcctgatagg tacttacatc aacacgcttt
    14041 aaattaaatg catcatttaa aggttttaaa acttgcacca tttgtatagt agaacaattt
    14101 ggattagcaa taatccctgt ttttttccaa tctttaatat cctcaggatt gcattcagga
    14161 accaccaaag gaacatcttt ttccattcta aaatgacttg tattatcaat tacaatagca
    14221 cctgattcta ctgcaaattt agcatatttt tcactcacac ttccacctgc gctaaaaaaa
    14281 gcaatatcaa taggattttc tttaaataca ttttcggtaa gttctttgac tttataagct
    14341 ttgcctttaa attctacttc actacctaca ctttttgcac ttgctaaagg taaaatactt
    14401 tccactggga aatcaagttc atctaaaaca tttaaaagct cttccccaac cgcaccagta
    14461 gcacccacaa tggctatttt ttgttttttt gacattactt atcctttatt tgatattttt
    14521 taattttttc atttaaaatt tttatatcca tacctaaaat ttgagaagct tgatccttgt
    14581 cataatctac acttaaaaga acttcacaaa tcaattcttt ttctaaattc tttacatctt
    14641 tttttatact tctagcttct aagaacaaat cttcacttga aatttcatca ttttcactta
    14701 aaatacaagc tctttgtaca acggatatta attctctaat attaccagga aaattatatt
    14761 caagtaaagc atttttagct tcttgactga gctgtttttc cttaaaatca tattctttac
    14821 aagtatcttc taaaaccttt tgagctatac ctaaaatttc ttctttacgc tctcttaaag
    14881 gcgggatatt aataggaaca gtgtttaaac gataatataa atctgaacga aattcgccat
    14941 tttttatttt ttcatccaaa tttgcattag ttgcactgat aattcttaca tctattttga
    15001 tgctttttgt acttccaagt cgcgtaattt ctttttcttg caaagctctt aaaagtttgg
    15061 cttgaatttc ataaggcatt tcgccaattt catctaaaaa taaagtgccc tcattagcca
    15121 tttcaaaaag ccctatttta gttgcattag catcagtaaa agcacctttt tcaaaaccaa
    15181 aaagctcact ttcaatcaaa tttgcaggaa tggctgccat attaatagca acaaaaggct
    15241 tattagagcg tttagaatga gtgtgaatat aacgagaaaa tacctctttt cctactccac
    15301 tctctccaaa aaacattaca gaggcatcag ttttagccgc tttttgactt aaatttaatg
    15361 ttttttctaa attaggagaa gttgaaaaaa aatctttatt ttcttctttt ttttcatttt
    15421 ttttgctttt tttatcggct gttttttctc ttatgatttt agcacgctta atagcctcga
    15481 ctaaagtatc aacatcaaaa ggcttggtta aaaaatcttt tactcccaaa cgaaccgctt
    15541 ctatagcacg gcttaaagta gcatttcctg tcataataat aaaatcatat ttattttcac
    15601 aggctttaac aaattctata ccatcaattc ctggcatatt aatatctgta ataatcaaat
    15661 ctgtattctc atctattttt tttaaagctt cagtagcaga tttataagat ttaatattaa
    15721 attcttcata ctctgctaat gcaatttcta aggatttgcg catattaata tcatcttcta
    15781 ctatgactaa attcatccta agccttttaa aaaatttcta ctatagtatc caatttgcgc
    15841 ttaattttga atttactttt ttttaagata ataaattatc gcattttgtt cgccaaattc
    15901 cacggtaaaa cgcaagggta aaattttaac ataagtttca ctttgagcac gtaataagtc
    15961 agtattaaca atatccttaa cactgattct agcccctata aagcaatcgc ttaactcatc
    16021 tttatgagaa tttaaaaaat taaatttaat tgtttttggc atattatcat caatcaatcc
    16081 taaagaagtt cgaggtaaaa cttttaaatc ttgatcacta taagaaattt cacataccca
    16141 ttgttcttca acattttcgc tttgcgtcat tgctaaggat aaattttgat tttgatgaaa
    16201 gagaatgaaa tttttactag aaagctctgc ccaaaaaata aattcatctt gggcaaaaag
    16261 cttaaagcta agaaagatta ataagcaaac aattctttcc acttgtctgc atcgatttta
    16321 agttctaagt ttaccctata aagcccttga ttaaaattct gatcaataat acttgcattt
    16381 tttatcaaac catttacttg cgcagtaata gttgaacttc taagcattgc atcttttacg
    16441 gtgtctttac cattcacttt cacaccataa agcttacttg caagctgtct gtaagcatct
    16501 gtaatcgctg ctctttttgc taaagctagg gcttgagcag tagaaactgt attcatcgga
    16561 gcaatccctt caccaactgc tgtaaaacta agttccgttt cgctagcatc tggagccaac
    16621 attttttctt ctctgataat atcacgcaca tcatctttat cgactttttg cacgataaca
    16681 tcttgagatg gggcagtgct atttgcactt gaatttttag ttgcactgtt tgcacttgat
    16741 acacaaccag cgaaaattcc tgctattgct agcataaaat aaattttttt catttttaca
    16801 ccttcaaaat attgtaatta gtaaaaataa aaagcaataa gcgttccaac tttaaactta
    16861 ttacaaatct aaaccaaagt tttcatcgct taactcatcc tcatcatttt cctctttagg
    16921 acacttagcg atgctaacca cctcgtcatt ttccacatta actacaatga caccactcgt
    16981 attacgccct gcttttctaa tgctttgcat atcaacacgt atcatcttgc ctgaacttgt
    17041 aagagccatc aaatccatag tttcatctac tataactacg ctaataagat ctttggtttt
    17101 ttctgtaagt ttcatacaaa ttacaccctt accacctctg ctttgcaatc tatattctcc
    17161 agcatttgtg cgttttccta taccttttgc acttatgctt aaaatttctt gctcatcatt
    17221 ttctataaca actgcaccta ctaattcgtc atttttctct ttaaacttaa tagccgtcac
    17281 cccacgactt acacggccga tttcacgcac tttagcaagt gggaatttga tacacatacc
    17341 ttttttggtt actgcaaaga gcattttacc ttgtgtgctt acactttctt cattttcaag
    17401 attttcatca tctaaatttt caatttcttg attttctaaa ttttcttcac caccagtggc
    17461 aaaaatttca tcttcatctc tttgaacaat aatagcagtt accaactcat cattttcatc
    17521 caagttgatc gctctaactc ccacacttct gatattttga tattcactca aatttgtacg
    17581 ctttacaata ccatttttag taaagaaaca taaagattta ctctcatcaa aatccgtggt
    17641 tggaataata gccatgattt tttcttcagc ttgtaaatta ataagattta ccactgcttt
    17701 tcctttagcc gttcttgagc cttcaggaat tttataaact ttaagccaat aaagctgtcc
    17761 acgatctgtt acaaacataa gtgtatcatg tgtatttgcc gtaaagaaac tttctataaa
    17821 atcatcatca taagtcgtaa cggctaattt tccttttccg cctcgttttt gcttttcata
    17881 ttgtttacta ggcacacgct taatataacc acgatgcgta atagttacaa ccatattttc
    17941 attaggaatc aaatcttcaa tatcaatatc atcataatca tcttcaattt gagtaatacg
    18001 tggcacatca aatttacttc taatttcttt taattcatcg cgaattaaat tttcaagcaa
    18061 ggtttcactt tttaaaattt cttcaagtct tgcaatttct ttcattaatt ctgcaagttc
    18121 attttcgatt ttttctcttt caagtcctgt taaacgacca agtttcatat ctaaaatagc
    18181 attggcttga agctcactaa gaccaaattt agctaccaaa gaatctcttg cggtattatt
    18241 atcagaacta tttttaatta aagcaatcac ttcatctata ttatcaagtg caattttaag
    18301 accttctaaa atatgagctc ttgctcttgc cttttgaagt tcaaaaatcg ttcttctaat
    18361 aataactgtt tttctatggg ttaagaaaag atttaaaagt tctaacaaag agaaaatttt
    18421 aggttcttta ttgtgaattg ccaacataat cacaccaaaa gtactttcca tagtagtaga
    18481 tttaaataga ttgtttaaaa caatttcact catagcctca cgtttaagct ctataacaac
    18541 gcggattcct tctttattgc tctcatctct tacttcagat attccttcaa tttgcttttc
    18601 tttaacaagc tctgcaatct gctctataag cctagcttta ttggtttgat aaggaagctc
    18661 atctataaca ataacatctt tatttgtctt tttttcaata tgagttttag cgcgcacttt
    18721 cacgcgacca cgccctgtgc gataagcttc tataatacct tttttaccat aaattattcc
    18781 acctgttgga aaatctggac ctttgataaa ctgcataatc tcttctaagc ttgcatcttt
    18841 actatcaagc aaatataaaa gtccatctat caactcattt aaactatgag gtgggatgtt
    18901 tgtcgccata cctacagcta taccacttga accatttaat aataaatttg gaaccctaga
    18961 aggtaagaca tcaggttcac tttctgaacc atcataattt ggaacaaaat cgaccgtatc
    19021 tttatctata tcttttaaaa gctcatgaga aagtttactc atttttgctt cagtataacg
    19081 catcgcagca gcgctatcac catctataga tccaaagttg ccttgtcctg taatacttgg
    19141 atatctcata gaaaaatctt gagccattct aaccaaagca tcataaactg ctgtatctcc
    19201 atgtggatga taacgaccta taacagcacc cactatacgg gctgatttga caaaatctgt
    19261 tctacttttt gcctcatcat tttgcatagc atataaaatt cttctatgaa caggctttaa
    19321 accatctctt gcgtcaggca aagcacgacc tataataaca ctcatagaat agtctaagta
    19381 actacctttt atagaatttt ctatatctac aagttcaata tcagaatctt tgctaaaaat
    19441 attctccata aaaatccttc tattagttca aagttttgat tatagcatat taaacttttg
    19501 catcagctaa aacaagagca aaaagtacag aaattttatt ttcttctaaa acttttttag
    19561 cttccaaaag gctagaacca gtcgttacaa tatcatctac taaaattaca ggttcgtgaa
    19621 tggtttttaa gagtttgtaa tttcttttat gtttttgacg aaattctaaa ctttttccag
    19681 aatatttaat atgattttgt gcttttaaaa cattaaaaac aggttttaca aattttgttt
    19741 taagatatct agctaaaata gcagaatgcg aataaagcat atcttcaacc ttatcatcta
    19801 aagctataac attaattgtc attctaggat caaaaaaatc tttaaatttt gcaaaactta
    19861 atttagcaag cattttataa acaaaataac cataaaaata atgtttagag tgaagcaagt
    19921 gttgtatttc atggtattta taaaaagaat agactttgaa attattatca agctttctta
    19981 catttaagga aaattcagaa agctctagct cgcataattc acaaaagcaa agcagagcaa
    20041 aagctccgca atttatacac ctcaaagttc agagattaaa ctagctgctt tatttgccat
    20101 ttgttttatt aacaaatgag tataaaaagt tgtttctttt aaatcatcaa aaccttgtac
    20161 atcttgcttg gtacggattg taaatttctt atttttattt atatcactaa cttgtaaaac
    20221 tcctactagt tttgaatgta atcctatagc atcttgagtt gctccataag atataaattc
    20281 taaatcaatc ttactcacat aaggtgaatt ttgatcgtta ttgtcaagca caactattcc
    20341 tctagcttca agttcttgtt ttaaataagt ataaaatacc gcattaaaat tcacatcaac
    20401 aaataacttt ttccctttag catttaaaac cttttgccct tcttttaaat cataaaatct
    20461 atgtaaataa acctttttca aagcaatacc agtgtctaaa gtgcgtttat tggcacaaca
    20521 ttgaattcca acatcgctaa tatataaaag ccctttaatc tttgcttcaa aaccaccagg
    20581 actttcacaa gaactgcatt gagaattttt agaaatttga ttaacttgag caaaagtatc
    20641 ttgtttagtt gcacaagcac tcaaaaataa aataggcact ataaaaatca aaaatttttt
    20701 aaacattttt tctccttaga aaattatttt aaaattgtat taaaaataca agcaaatttc
    20761 aagccaagtt ttaaatttat catcaatcta tctttaaaac actcaaaaaa gcctcttgag
    20821 gtaaatttac cttacctata gctttcattc tttttttacc ttctttttgc ttttctaaaa
    20881 gctttctttt tctagtaata tccccaccat aacattttgc tgtcacattt ttacccatgg
    20941 atttaacagt ttctcttgcg atgattttat ttccaatact tgcttgaatg gccacttcaa
    21001 aaagctgtct aggaactatt tctttcatag cactaacaag ttctcttcct ttactttgcg
    21061 ctttttcatt aggcacgata atgcttagcg catcaacatt ttcacccgct accttaatat
    21121 caagttttac caaatcccct actctaaatt ctataggctc ataatcaaaa ctcgcataac
    21181 cttttgttaa ggactttaat ttatcataaa aatccatcac aatctcattt aaaggcacat
    21241 catattctag caaaacacgc tcaggtgtga tatagtccat tttaacctgt actcctcttt
    21301 tgcgatttaa aagagtgatt aaattcccta aaaattcact tggagtaatg atagtagctt
    21361 taacataagg ctcttttata tgatcgattt tattaacagg aggaagctcg ctaggatttt
    21421 gaattttaat aaactctcca tcggtttgat aaatttcata agtcacagtt ggagctgtag
    21481 caatcaaatc aagattaaat tctctctcaa gcctttcttt gataacttcc atatgtaaaa
    21541 gccctaaaaa tcctacccta aaaccaaagc ctaaggccaa agaagtttca ggctcataag
    21601 taatagaact atcattaagc tttaatttat ccaaagcatc tcttaaatct tcaaatttat
    21661 ccgtttctat aggataaagt cccgcaaata caaaagcttt agccttttca aaaccaccta
    21721 tggcttcttt agctttgttt tttaccaaag tgatggtatc gcctacttgt acatcaccta
    21781 cggttttaag ccctaaaacc accacaccta cttcgcctga ttgtaaagat tgagttttaa
    21841 ttggacttaa agggtgggga taaaaaagat cttgaactat atgtttttta tccgtactca
    21901 tgactaaaac ttcatcgttt ttagcaatac ttccttcata aatcctaacc aaagccaaag
    21961 cacccaaata attatcaaac caagaatcat aaattaaagc cttagtagga gcttcatcat
    22021 ctgtttttgg tgcagggatt ttagtaataa ttgtttctat aagctctttt atacccactc
    22081 ctgtttttgc actcacacaa attgcatctt tgcaatctat acctataata tgctcgattt
    22141 catgctttac tttctcaaca tcagcattag gtaaatcgat tttattaatc acaggaatga
    22201 tttcaagatt attttcaagc gctatataaa cattagctat agtctgtgct tcaacacctt
    22261 gagaagcatc tactacaagc aaagctcctt cacaacttgc caaagaacga ctcacttcat
    22321 aagaaaaatc cacatggcca ggagtatcaa taagatttaa aacaaaattt tcattattaa
    22381 atttataatt taaacgcact gattgtgctt ttatggtgat accacgctct ttttctatat
    22441 ccatagtatc cataacttgt gaactcatct gcctatcgct aatagcacca cactcactaa
    22501 taatcctatc tgcaagagta gattttccat gatctatatg agctataata gaaaaatttc
    22561 taatattttt taccgaca
//
LOCUS       DARATF010000019        21841 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.019, whole genome shotgun sequence.
ACCESSION   DARATF010000019 DARATF010000000
VERSION     DARATF010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21841
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.019"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            58..813
                     /gene="proB"
                     /locus_tag="SB502_000541"
     CDS             58..813
                     /gene="proB"
                     /locus_tag="SB502_000541"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEG0434016.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE"
     gene            887..1804
                     /locus_tag="SB502_000542"
     CDS             887..1804
                     /locus_tag="SB502_000542"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEG0434017.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDK
                     NSSEVFELLANLAAKLILSTLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSEDSLC"
     gene            1767..2420
                     /locus_tag="SB502_000543"
     CDS             1767..2420
                     /locus_tag="SB502_000543"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEG0434018.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCKQIRNGKIDENFAIYALEQIN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKEVLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFAPQNTALCDIEISLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            2417..3202
                     /locus_tag="SB502_000544"
     CDS             2417..3202
                     /locus_tag="SB502_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEG0434019.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            3208..4044
                     /locus_tag="SB502_000545"
     CDS             3208..4044
                     /locus_tag="SB502_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEG0434020.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KF"
     gene            4105..4530
                     /locus_tag="SB502_000546"
     CDS             4105..4530
                     /locus_tag="SB502_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEG0434021.1"
                     /translation="MFEDMHPSIMLATIAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLCVNDELEVIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAIQKKELQEHLNIHLPELKQALQNNIKKI"
     gene            4541..5053
                     /locus_tag="SB502_000547"
     CDS             4541..5053
                     /locus_tag="SB502_000547"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEG0434022.1"
                     /translation="MSKLLFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVGILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVENIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            5056..5577
                     /locus_tag="SB502_000548"
     CDS             5056..5577
                     /locus_tag="SB502_000548"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEG0434023.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NEIKKERKMEFLDSFFDIKNSSFQNFLRLLIENSRLECIPQIVKELERQKAFKENIFV
                     GIVYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKA
                     LQNKLNEYILKII"
     gene            5591..7096
                     /gene="atpA"
                     /locus_tag="SB502_000549"
     CDS             5591..7096
                     /gene="atpA"
                     /locus_tag="SB502_000549"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEG0434024.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
     gene            7105..7989
                     /locus_tag="SB502_000550"
     CDS             7105..7989
                     /locus_tag="SB502_000550"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEG0434025.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKTVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLEDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            8014..9411
                     /gene="atpD"
                     /locus_tag="SB502_000551"
     CDS             8014..9411
                     /gene="atpD"
                     /locus_tag="SB502_000551"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEG0434026.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            9415..9804
                     /locus_tag="SB502_000552"
     CDS             9415..9804
                     /locus_tag="SB502_000552"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEG0434027.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNVRMH"
     gene            9804..10358
                     /locus_tag="SB502_000553"
     CDS             9804..10358
                     /locus_tag="SB502_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEG0434028.1"
                     /translation="MNFEAIFYFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            10367..10756
                     /locus_tag="SB502_000554"
     CDS             10367..10756
                     /locus_tag="SB502_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEG0434029.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSAPTVKSLIISINAKKEIFLNQEKYDFISFADNIAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            10759..11538
                     /locus_tag="SB502_000555"
     CDS             10759..11538
                     /locus_tag="SB502_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEG0434030.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQVDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGASSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKND"
     gene            11548..12756
                     /gene="tolB"
                     /locus_tag="SB502_000556"
     CDS             11548..12756
                     /gene="tolB"
                     /locus_tag="SB502_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HEG0434031.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFEYTLNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGG
                     MVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            12833..13330
                     /gene="pal"
                     /locus_tag="SB502_000557"
     CDS             12833..13330
                     /gene="pal"
                     /locus_tag="SB502_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEG0434032.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            13334..14281
                     /locus_tag="SB502_000558"
     CDS             13334..14281
                     /locus_tag="SB502_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEG0434033.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSFLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            14296..14865
                     /locus_tag="SB502_000559"
     CDS             14296..14865
                     /locus_tag="SB502_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEG0434034.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARVASEDEILTGIIAGSHSCG
                     CGSGHGHDHHHGHGHGGGGCCGGSGCGCH"
     gene            14865..15785
                     /gene="fabD"
                     /locus_tag="SB502_000560"
     CDS             14865..15785
                     /gene="fabD"
                     /locus_tag="SB502_000560"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEG0434035.1"
                     /translation="MNAAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCAKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVISNANAKIYTRKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVI"
     gene            15782..16471
                     /gene="pfs"
                     /locus_tag="SB502_000561"
     CDS             15782..16471
                     /gene="pfs"
                     /locus_tag="SB502_000561"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HEG0434036.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKVEHANNTYYFANYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQVLLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KVREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            16468..17223
                     /locus_tag="SB502_000562"
     CDS             16468..17223
                     /locus_tag="SB502_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine biosynthesis protein TtcA"
                     /protein_id="HEG0434037.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALVHL
                     LNRMQAHAPFKFELEAITLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYKVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIYNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKEHPKLFTSLKTAFANLHTESFWLQKA"
     gene            17228..17749
                     /locus_tag="SB502_000563"
     CDS             17228..17749
                     /locus_tag="SB502_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEG0434038.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFNKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            17749..18363
                     /gene="recO"
                     /locus_tag="SB502_000564"
     CDS             17749..18363
                     /gene="recO"
                     /locus_tag="SB502_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HEG0434039.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            18360..18767
                     /gene="ybeY"
                     /locus_tag="SB502_000565"
     CDS             18360..18767
                     /gene="ybeY"
                     /locus_tag="SB502_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEG0434040.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIEHFNLPKSLIVRTLED"
     gene            18891..19580
                     /locus_tag="SB502_000566"
     CDS             18891..19580
                     /locus_tag="SB502_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434041.1"
                     /translation="MIVFPLSSFNRYFGNNPLQTLTKIRDESIENGNPELTKKQREEL
                     GNDLIDLYKISKKFSDKIELVEGSIEDKLRNNELPESEVKNLFQWMDENAKHPRWMHI
                     DGVSYDEAYVKIFHTSKSIDEFKEKYLELQKKYFVDFNNIDSSQKKLQETSEEDKKAF
                     KPIQVESKSETYKDDNKMNELLRKLLETKFGTSDELEILFGMNFSNDNAGEFNKILSQ
                     NTSAKIIDIKA"
     gene            complement(19605..20531)
                     /locus_tag="SB502_000567"
     CDS             complement(19605..20531)
                     /locus_tag="SB502_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEG0434042.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFISIHGRTRKQLYSGKADYGSIASAKASVKIPVIANGDINAQNAKEVYKITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GHKDASAFRDTVNRIDNVEEMRKKIEEFFSLT"
     gene            complement(20528..21514)
                     /locus_tag="SB502_000568"
     CDS             complement(20528..21514)
                     /locus_tag="SB502_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434043.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFIYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRSVAQLFKTIKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNE
                     KNHLKNDANYAYNKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLI
                     KRFKEGNLELSVAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKIDLNQLIQ"
     gene            complement(21504..>21841)
                     /gene="dksA"
                     /locus_tag="SB502_000569"
     CDS             complement(21504..>21841)
                     /gene="dksA"
                     /locus_tag="SB502_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HEG0434044.1"
                     /translation="KNILEERKKAILENLQSNSNEIEALHNSVPSDSVDFSVIETGSQ
                     IDFAISTNLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHARYCITCRQI
                     AEQGKKHEN"
BASE COUNT         7918 a         2756 c         3917 g         7250 t
ORIGIN      
        1 ataactagtt tatatgaaat tttggctaaa attataaaaa tttttcaagg aataagcatg
       61 aaaagaatag ttgttaaagt gggttctcat gtgattagcg aagaaaacac tttaagtttt
      121 gagcgtctta aaaatttagt cgcattttta gctaaactca tggaaaaata tgaagtgatt
      181 ttagtaactt cagcggctat ttcagcagga cacaccaaac tagatatcga tagaaaaaat
      241 ctcatcaata aacaagtttt agccgctatt ggacaacctt ttttaatcag tgtttataac
      301 gagcttttag ccaaatttaa taaactaggt ggacaaattt tacttacagg taaggatttt
      361 gactctagaa aagctaccaa acacgcaaaa aatgctatcg atatgatgat aaatttagga
      421 attttaccta ttatcaatga aaatgacgct acagctatag aagaaattgt ctttggtgat
      481 aatgatagct taagtgctta tgctacgcat ttttttgatg cggatttgct tgtgatttta
      541 agcgatattg atggatttta tgataaaaat cctagtgaat ttagtgatgc aaagcgttta
      601 gaaaaaatca ctcatattaa agaagaatgg ctacaagcaa ccataaaaac aggtagtgag
      661 cacggaacag gtggcatagt aaccaaactt aaggcagcta aatttttact tgaacacaat
      721 aaaaaaatgt ttttagcaag tggctttgat ttaagtgtgg caaagacatt tttattagaa
      781 gataaacaaa taggtggaac tttgtttgag tgattaattt attaaattct cttttaaaat
      841 caaataagct ataattaaaa cttttaattt cacacaaagc gaaaaaatga aaaaaattat
      901 ttttatgggc actccatctt acgcaacttg tattttaaaa gcactagtag aaaatgaaaa
      961 ttttaaactc gtagcacttt ttactcagcc tgataaagcc gtaggtagaa agcaaatttt
     1021 aactccaagt gatactaagg cttttttaag tcaaaattat cctagtattc ctatttttac
     1081 tccaagttct ttaaaagata aaaatattat aagagagatt aaggatttaa atcctgattt
     1141 tatcgtggtt gctgcctatg gaaaaatttt acctaaagcc attttggatt tagcgccttg
     1201 tgtgaatttg cacgcttctt tacttccaaa ataccgtggt gccagtccga tccaaagtgc
     1261 aattttaaat aaagatgaaa aaagtggagt ttgcaccatg ctcatggaag aagggcttga
     1321 cacaggtgct atacttgaaa gcttagaatg tgatataaaa gataaaaatt caagtgaagt
     1381 ttttgaactt ttagcaaatt tggccgctaa gctgatcctc tctactcttt taaattttga
     1441 taaaatcacc cctaaaaaac aagaggaaag tctagcaacg ctttgtagaa aaatcaaaaa
     1501 agaagatggg cttataaatt tgcaaaatgc aagagaactt tatcaaaaat atctagcttt
     1561 caccccttgg cctggagttt tcttggaaaa tggacttaaa ttcttagaac ttgaacttgt
     1621 ggatgaatta aaacaaaatg ctaagatggg tgaaatttta gaattagaaa aagaaagttt
     1681 tttgcttgct tgcaaacaag gagttttgcg tattaaaaaa cttcaagaaa gtggaaaaaa
     1741 agctcttgat ggtaggactt atttaaatgg aaaaaggctt aaaagtgaag atagtttgtg
     1801 ttgaaagtat agactcaact catctttttt tatgcaagca aatacgcaat ggaaagattg
     1861 atgaaaattt tgctatttat gctttagaac aaataaatgg agttggaagt agggaaaatt
     1921 cttggcagag ctctaaagga aatttacatc tttctttctg tattaaagaa gaagacttgc
     1981 caaaagattt acctttagct tctgtgagta tttattttgc ttatttactt aaagaagttt
     2041 tacaagaaaa aggttctaaa atttggctta aatggcctaa cgatttatat ttagatgata
     2101 aaaaagctgg aggggttata agtgctaaaa tttcaaattt tatcataggc ggtatgggtt
     2161 taaatctgaa atttgcaccc caaaatacag ctttatgcga tatagaaatt tcgcttaaag
     2221 atttagtgag tgagtttttg caaaaagtag aaaaaaaaat tttatggaag aatattttta
     2281 gcaagtatat gttagaattc gaaaaatcaa gaaaatttag cgtccatcat gaaggtaaag
     2341 ttttttcact tgaaaattct tttttgtatg aagatggttc aattttacta ggcgataaaa
     2401 gggtgtatag tttaagatga gcgaaattat tacaatagca aatcaaaaag gtggagtagg
     2461 aaagactaca acagcagtaa atttagccgc ttctttggct gtggctgaaa aaaaagtact
     2521 tttgattgat gttgatccgc aagctaatgc gactacagga cttggtttta atcgtaataa
     2581 ttatgagtat aatatttacc atgtttttat aggaagaaaa aagctttcag atattatttt
     2641 aaaaacagaa ttgccacaac ttcatttagc tccttcaaat ataggtcttg taggtataga
     2701 acaagagctt gctaaaggtg aaaataatga gaaaaaaatg cttcttaaaa atcaaattca
     2761 agaagtgatt gatgagtatg attttattat tattgattct ccacctgctc ttggaagtat
     2821 tactataaat gcttttgcag caagcgatag tgtaattatc cctatacagt gtgaatttta
     2881 tgcgcttgag ggtgtagcta tggttttaaa tacaattaaa attatcaaaa aaactattaa
     2941 ttctaaactt agggttcgtg gatttttacc gacaatgtat agctctcaaa ataatctttc
     3001 taaagatgtt gtagatgatt tgaaacaaaa ttttaaaaaa caacttttta ctattaatgg
     3061 aaacgaagat gattttattg tgatccctcg caatgtaaaa cttgcagaaa gtccaagttt
     3121 tggaaagcct ataattcttt atgatattaa atcaccaggt tctgttgctt atcaaaattt
     3181 ggcgtattct atattaggat aattataatg gggttaaata aagatagggg tttaagtagt
     3241 ttaatcagtg atatggatac tgtttatagt aaagaattgg gttttgataa aaatcaaagc
     3301 actatgatag aaattgatca aatttcacct aatccatttc agccaagaaa gaattttgat
     3361 caagaagctt tagatgagct tgctaattct atcaaagaat ttggacttat tcagcctatt
     3421 attgtattta aaaaaaataa taaatttatt ttaattgctg gagaacgtcg cttaagagca
     3481 gtgaaagcat taggaaaaaa agaaattcta gcttttattg ctgatattga tgagaataag
     3541 cttagagaat tggctcttat tgaaaatata caaagagaga atttaaaccc tattgagctt
     3601 gctaattctt ataaggattt aatgcaagtt cataaaatta ctcaagagaa tttagcagaa
     3661 cttattcata agtctcgcac tcaaataaca aatactttaa gacttctgaa tttagatatt
     3721 agaactcaag agttgattgc ttctggaaaa atttctcagg gtcatgctaa agttttggtt
     3781 ggtttagatc aaaaagatga aaaaatgtta gttgatagca taataggtca aaaacttaat
     3841 gttagagata ctgaaaaaat agttaaaaaa ataaaaaata atgaaagctt acctaatcaa
     3901 gaatttgaag atgaaataaa aaaattaaaa caaatactaa atcgctttgg atttgactgc
     3961 aaaaataaaa ataatgattt tgtaattcat ttagaaaata ttgataaaat taaaaaatta
     4021 atcaaaatgc ttgaaaagtt ttaaccaaaa tcttagcttt tttatggtaa aatagtcctt
     4081 caaaaattct aaccaaggag aattatgttt gaagatatgc atccttccat aatgcttgct
     4141 actatagcta tttttttggc tatgatagtt attttaaata gtatgctgta taagccgctt
     4201 ttaaaattta tggatgaaag aaatgattct ataaaaaatg atgagaataa agtaaaagaa
     4261 aattctcaag aagttttatg tgtgaatgat gaattagaag ttattcatat taacactaga
     4321 gaagaaattc aaaaaatcaa acaaagtgct atagctgctg ctaaagaaga ggcagagcaa
     4381 attcttagaa gcaagaaaga agaattagaa agaaaaatgg ccagctttta tgcagattta
     4441 gctattcaaa aaaaagagtt acaagaacat ttaaacatac atttacctga gcttaagcaa
     4501 gctttgcaaa ataacataaa gaaaatttaa gaggagagaa atgagtaagt tattatttat
     4561 tatatttttg ctacctttgt atgcttttgg tgcatcaaac ggtagtggag aatatgatat
     4621 tattccaagg actattaatt ttctaatttt tgtgggtata ttgtattatt ttgttgcaac
     4681 tccatttaaa aatttttaca aaaaccgtat tgtaaaaatt tcttctaaac ttgatgaaat
     4741 tcaaaaaaaa cttttagaaa gtaaagctaa gaaattagat acaatgaaaa aacttgaaga
     4801 agctaaggca agtgctgctg ccgctttaat tacagcaaaa aaagaagctg aaatcttagt
     4861 tgaaaatatt aagaaagaaa ctcaagatga gttagattta cttcaaaaac attttgagga
     4921 acaaaaagat tatgaattta gaaaaatgga aaaagaatta gtatcaaata ctttaaatga
     4981 aattttttct gatccaaata tgacattaaa acagagtgaa ataatagaac ttatgatgaa
     5041 gaaggtatct taaatatgga aaatataatt gcaagaagat atgcaaaagc gatagcttca
     5101 agagctgata taaatgattt ttatcagaat ttgtgtattt taaattctgc ttttgttttg
     5161 ccaaaattta aaaatattat agaatctaat gagattaaaa aagaaagaaa aatggaattt
     5221 cttgattctt tttttgatat taaaaattct agttttcaaa attttttaag acttttgatt
     5281 gaaaattcaa gattagaatg cattcctcaa atagttaaag aacttgaaag acaaaaagct
     5341 tttaaagaaa atatttttgt tggtattgta tattctaaag aaaaattaag tcaagaaaat
     5401 cttaaagatc ttgaagtcaa acttaacaaa aaatttgatg caaatattaa actaaataat
     5461 aaaatcagtc aagatgatag tgttaaaata gaattagaag aattaggtta tgaactttct
     5521 ttttctatga aagctcttca aaataagcta aacgaatata tattgaaaat tatctaagga
     5581 gaaaaagtaa atgaaattta aagctgatga gatcagttca ataatcaaag aaagaattga
     5641 aaattttgat ttaaatcttg aaattgaaga aacaggaaag attatttctg tagctgatgg
     5701 tgttgctaag gtatatggac ttaagaatat tatggctgga gaaatggtag aatttgaaaa
     5761 tggtgataaa ggaatggcct taaaccttga agagtcgagt gtaggtattg ttatacttgg
     5821 aaaaggagaa ggtttaaaag aaggtgcttc tgtaaaaaga cttaagaaat tacttaaagt
     5881 tccagtaggt gaggctttga ttggccgtgt tgtaaatgct ttaggtgagc caattgatgc
     5941 taaaggtgtg atcaatgcta atgaatatcg ttttgttgaa gaaaaagcaa aaggtattat
     6001 ggcgagaaaa agtgttcatg agcctttaca tacaggaatt aaagctattg atgcgcttgt
     6061 gccaattggt cgtggtcaaa gagagcttat cataggtgat agacaaacag gtaaaactac
     6121 tgttgctgtt gatactatta tatctcaaag aggccaagga gttatctgta tatatgttgc
     6181 aattggtcaa aagcaaagta cagtggcaca agtggttaaa agactagaag aacatggtgc
     6241 tatggaatat actattgttg taaatgccgg tgcttcagat cctgcggctt tacagtactt
     6301 agctccatat actggtgtaa ccatgggtga attttttaga gacaacgcaa aacatgcttt
     6361 aattgtttat gatgatttga gcaagcatgc tgtagcttat cgcgaaatgt ctttgatttt
     6421 acgtcgtcct ccaggtcgtg aagcttatcc aggcgatgtt ttttaccttc attcaagatt
     6481 gcttgaaaga gcaagcaagc taaatgatga attaggtgct ggttctttga cggcattgcc
     6541 gataattgaa acacaagcag gagatgtttc tgcttatatt ccaactaatg ttatttcaat
     6601 tacagatgga caaattttct tagaaactga tttatttaac tcaggaattc gtcctgcaat
     6661 taatgttggt ttatcagtat ctcgtgtagg tggggctgct caaattaaag ctacaaaaca
     6721 agtttcaggc acattaagac ttgaccttgc tcaatataga gagcttcaag cttttgcaca
     6781 atttgctagt gatttagatg aggcaagtag aaaacaactt gaacgtggac aaagaatggt
     6841 tgaactctta aaacaaccac cttattctcc gcttagcgtt gaaaaacaag tagttttaat
     6901 ttttgcagga accaaaggtt tcttagatga tattgctgtt tctagaatta aggaatttga
     6961 agatggaatt tatcctttta ttgaggcaaa acatccagat atttttgagc aaattcgctc
     7021 taaaaaagct ttagattctg atttggaaga aaaactagct aaagccatta atgagtttaa
     7081 agcaaatcat ttataaggtc ttttatgtct aatttaaaag aaattaaaag aaaaattaaa
     7141 agtgttcata acactcaaaa gactacaaat gctatgaagc tagtttctac tgctaagtta
     7201 aaaaaagcag aagaagcagc taaaagatca aaaatttatg cacaaaaaat cgatgaaatt
     7261 ttgagtgaaa tttcatttca gatcaataaa attgttcaca atgaagatga tgtgcgttta
     7321 tctttgtttc ataaaaaaga acaaattaaa accgtagatt taatatttat cactgcagat
     7381 aaaggcttat gcggtggttt taatattaag actttaaaaa cagtaagtga aatgctaaaa
     7441 gaatatgaag caaaaaatat taatattcgt cttagagcta taggtaaaac tgggattgaa
     7501 tattttaatt ttcaaaaaat agaattgtta gagaaatatt tccatcttag ttctagtcct
     7561 gattatgaga aagcatgtga agtaattcat gctgctgtag atgatttttt aaatggaaat
     7621 acagatgaag tgattttagt tcataatggt tataaaaata tgattaccca agaacttaaa
     7681 attaatcatc ttattccagt tgaaccaaag agtattgaac agactcataa ttctctttta
     7741 gagcttgaac cagaaggaac tgagctttta gaagatttaa tgaaaacata ttttgagtat
     7801 aatatgtatt atgcgttaat cgattctttg gcggcagagc atagtgcaag aatgcaagct
     7861 atggataatg caactaataa cgcaaaggca agagtgaaac agctaaattt agcttataac
     7921 aaagcaagac aagaatctat taccactgag cttatagaaa ttatcagtgg tgttgaatca
     7981 atgaaatagt aaattttaag gagaagataa ataatgcaag gatttatttc acaggtatta
     8041 ggtccggttg ttgatgtaga ttttaacgac tatttacctc aaattaatga agcaattgtt
     8101 gtaaattttg aaagcgaagg aaaaaaacat aaacttgttt tagaagtagc agctcattta
     8161 ggagataata gagttagaac tattgctatg gatatgacag atggtttggt aaggggctta
     8221 aaagctgagg ctttaggtgc tcccattagt gttcctgttg gtgagaaagt tttaggaaga
     8281 attttcaatg ttactggaga tttgatcgat gaaggtgaag aaatttcttt cgataaaaaa
     8341 tgggcaattc atagagatcc accagctttt gaagatcaaa gcacaaaaag tgagattttt
     8401 gaaacaggga ttaaagttgt agatttactt gctccttatg caaaaggtgg taaagtaggt
     8461 ctttttggtg gtgcaggtgt tggtaaaact gttattatta tggagcttat tcacaatgtt
     8521 gcatttaagc atagcggcta ttctgtattt gcaggtgtgg gtgagagaac tcgtgaagga
     8581 aatgaccttt ataatgaaat gaaagaaagt aatgttttag acaaagttgc tctatgttat
     8641 ggacaaatga atgaaccacc aggggcaaga aatcgtattg ctttaacagg tttaacaatg
     8701 gctgagtatt ttagagatga aatgggtctt gatgtgctta tgtttattga taatatcttt
     8761 agattttcac aatcaggttc tgaaatgtca gcacttttag gaagaattcc atcagctgtg
     8821 ggttatcaac caaccttagc aagtgaaatg ggtaaattcc aagaaagaat tacttcaact
     8881 aaaaaaggct caatcacttc agttcaagct gtttacgttc cagctgatga cttaaccgac
     8941 ccagctccag caactgtttt tgctcactta gatgctacaa cggttttaaa tagagctatt
     9001 gctgaaaagg gtatttatcc tgcagttgac ccacttgact caacttcaag aatgcttgac
     9061 ccaaatatca ttggagaaga acattataaa gttgctcgtg gtgttcaatc agtgcttcaa
     9121 aaatacaaag atttacaaga tatcatcgcc attttaggta tggatgagct tagcgaagag
     9181 gataaacttg tagttgaaag agcaagaaag attgaaaaat tcttatcaca accatttttc
     9241 gttgcagaag ttttcacagg tagcccagga aaatatataa gccttgaaga tacaatagca
     9301 ggatttaagg gaattttaga aggtaaatat gatcatttac cagaaaatgc tttctatatg
     9361 gttggaaata tagatgaagc tattgcaaaa gcggataaat taaaaggtta atttatgaac
     9421 gatttgatta atttcgagat agttacgcct ttgggtgtaa tctatcaagg agaagtaaaa
     9481 tctgttactt taccgggtag tgaaggagaa tttggcgtgc ttaaaggaca tgctgctttg
     9541 gtttcttctt taaaatctgg agtaattgat attgaaaaag ctgatttaaa ccatgaatta
     9601 attgctattg atgctggaca tgcaaaggta gatgaagata agatttgcgt gttagcaaag
     9661 ggtgcggttt gggtttgtgg aagtgatgaa agtgagattg aaaaaaatct tgctcaagca
     9721 aaagatttga ttaaatctat gagttctgat aatgcagctt tagcagcaac tttttcaaaa
     9781 cttgataatg taaggatgca ttaatgaatt ttgaagctat attttatttt ttcaatagtt
     9841 caagtattat tacttatata gttttattat ggctttcttt atattttatt ttagcattta
     9901 gtattttgtt tgctagattg acttatttgg ctacatggag aaataaagaa aaagaaagtt
     9961 tagaaacttt gctcttgggt gagaaggatt taagtcgtac tgattcgatt ttaagaaaat
    10021 gcaatgatac aacttcaaat catttagaaa tctataaaaa tttagcaagt cgccgcgctt
    10081 ctgctggact tacttggctt agtattattg cttcaacttc accttttata ggtctttttg
    10141 ggacagttat ttctatactt gaaacttttg gtgggcttgg aactcaaaat tctttaagta
    10201 tcatagctcc taaaatcagc gaggctttag ttgctacagg ttgtggtatt ttagtagcaa
    10261 ttcctgctta tacatttcat ctcatcatta aaagaaaagc tttcgaactt ttaagcatta
    10321 ttgatagcga gattaaagtt ataagttcga gtaaataagg ttaaaaatgc catttgatga
    10381 tgaaaaacct gagcttaata tcacaccttt agtagatatt atgcttgtat tgcttgcgat
    10441 tttaatggta acagctccaa gcattactta tgaagaaaaa attaatcttc cacaaggtag
    10501 tcaaaaaaat actagcgctc caactgttaa gagtttaatt attagtatta atgcaaaaaa
    10561 agaaattttt ttaaatcaag aaaaatacga ttttataagt tttgctgaca atattgctca
    10621 aagaaaagca caatttaata ccgaagatcc ggtttttata cgcgctgata aaagcttaaa
    10681 atatgacgat gttatttcag tcttaagaag tgtaaaaaat ttaggattta ataaagttgc
    10741 tttacagact gaataatcat gaaaaattat ggtttgagta atttaaattc gtttttactt
    10801 gctttagcaa tatatattag tatagtaatt cttgtttttt ttagacttgt aagcgaggtt
    10861 gaacctgcta tacaatatac cgatataaaa gatagttttg tagatattga acttgctgaa
    10921 ccatcaaaac aagttattac tcaaagcaac actcctaaag aaatacaaaa accaacagag
    10981 caagttgata tagaaaagct ttttgctcag actacaaata aaacagttaa aacagaagat
    11041 attgaccaaa aggcgagtaa ttttaatgag ctttttggaa atatcaaaga aatacaagaa
    11101 gaaaagacta caaaaattca atcaagtgct aaatcaggag cttctagtgc cccaaaacct
    11161 caagcttctg aacttgtaaa acaacttaat gatagcttgc ttcaagaaga aagttcaaca
    11221 caaggtgaaa gtacaaaggc acaaaaaatt ggaatttatg atgaattttt agggaaagtc
    11281 gtgcgtatta tcactcaaag atggactcag tattatccaa atagtgaaaa aatttctgtt
    11341 aaggtaaaaa tttttattga tgaaaatgga aaatttggct atacttcagt tgaaaaaagt
    11401 gggaatcctt tatatgatgc taaagtggct gaatttttag aaagtcaaaa aggtaaattt
    11461 attacttatc ctccgcaaaa taaaaatata agcattacca tgaatttaag agatgaagca
    11521 aaagttaaaa atgattagga gaacaaaatg aaaaaaattg tagcaatttt tttagtcttt
    11581 ttaggaagtc tttgggcaga agatccggtt attgatgttg ttaattctgg tgtggtttta
    11641 ccaaagatta tcgttaaaga taattcaaat ttaagtgatg agaatttaaa gaaaagcttt
    11701 tataatatca ttgtgaacga tttgaaagta agttcaaact ttgaagttgt tgctaatgca
    11761 actgagacaa gtaattatac ttttgaatac actttaaata aaaatggtaa cactttgagt
    11821 ttaaatgtaa aaataaaagc tggcggttct gataagtcag agcaaactta tactttaaat
    11881 ggtttagagc aatatccatt tttggcacat aaaagcgtca aagcttctgt aaatgcgtta
    11941 ggacttgcac ctgttgattg gatggatcat aaaattttga tcgcgagaaa ttctagctct
    12001 aaaaaaagtc aaattattat ggctgattat actttaactt atcaaaaagt tattgttgat
    12061 ggtgggctta atttatttcc aaaatgggga aataaagaac aaactctatt ttattataca
    12121 gcttatgatc atgataagcc aactttatac cgttatgatt taaataccaa taaagctagt
    12181 aaaattttat caagtggcgg tatggttgta gcaagtgatg tgagtgtaga tggaagtaaa
    12241 ctacttgtta ccatggctcc aaaagatcag cctgatgttt atttatatga cttaaatacc
    12301 aaaaatctaa cacaattaac taattattct ggtattgatg ttaatggaaa ttttattggc
    12361 tcagatgata gtaaagtggt atttgtaagc gatcgtttag gatatcctaa tatttttatg
    12421 caagatttaa atagcaatag tgctgaacaa gttgtttttc atggtagaaa caattcggct
    12481 gtttcgactt ataaagattt tttggtttat tcaagtcgtg aaccaaatca agcaggtgtt
    12541 tttaatattt atttgatgtc aattaatagt gattatattc gtcaacttac agcaaatgga
    12601 aaaaatttat ttccaagatt ttctagtgat ggtggaagta tagtatttat caaatattta
    12661 ggtgcgcaaa gtgctttggg tgttattcgt gtaaatgcaa ataagacttt ttattttcct
    12721 cttagggttg gaaaaattca atcaattgat tggtaaaaat ttcaatttta ggttaaaatt
    12781 aattaaaaat tagatataat aataagaatt tattaacttt gaaaggtcat aaatgaaaaa
    12841 aattcttttt acttcaatcg cagctcttgc agttgttatt agtggttgta gcacaaaaag
    12901 cactagcgta agcggtgata gtagtgttga ttcaaatcgt ggttcaggtg gaagtgatgg
    12961 ttgggatatt gattcaaaaa tttctcaact taatgatact ttaaataaag tatattttga
    13021 ttttgataaa ttcaacattc gtcctgatat gcaaaatgtt gtaagcacaa atgctaatat
    13081 ttttaacact gaagtaagcg gtgtaagtat tactgttgaa ggaaactgcg atgagtgggg
    13141 aaccgatgaa tataaccaag ctctaggttt aaaaagagca aaagctgtaa aagaagcttt
    13201 aatcgctaaa ggtgtaaatg ctgatagaat tgctgttaaa agctatggag aaacaaatcc
    13261 tgtgtgtact gaaaaaacta aagcttgcga tgcgcaaaac agacgtgctg aatttaaatt
    13321 atcaagataa ttaatgaaaa aaatattcac agtagctctt cttggagcta ctttacttta
    13381 tgcagaaagc tcagcttttg gtgcaggaga tataacaagc aattcttctt atggtttaac
    13441 ttcaaatgaa aaattattta aagaaaagtt agataattta aataatgaaa atatacaaac
    13501 aaatgctaga attaatgaaa ttaacgaaag aatcgagggt ttacaaagca ctttagaagg
    13561 tataaattct caatatgcca aatcaaattc tagattaagt caagttgaag agaataatca
    13621 aaatattgaa aataatttta ctagtgaaat tcaaaaatta aaggcttatg ttgaagaaag
    13681 tagaaaaatt caagaagcta ataataagca agtaaaaaaa gttttagccg aacttagttt
    13741 tttagtagat gctattaatg caaattatgt ttctaaaaac gaattaaatg atgcaaattt
    13801 aagcgttaaa actattacac ctagtgttgt tgtttcaact acagattcaa atagtaccat
    13861 tgaaaacaat aatactcaaa atacccaaga tgataaagca aaacaaattg atgaatcttg
    13921 gaaaaagaaa aaaaataatg aaattttaga attagcgata aaagatgttg ataaaaatgc
    13981 ttttgaagat tccaaagcaa aattaaattt tctcataaca aagcagtata aacctgcaag
    14041 agcaaatttt tggttagggg agatcgagta taaacaaaaa aattataaca atgctattgt
    14101 ttattataaa aaaagttctt ctttgagtac aaaaggagat tatttcccaa aacttttata
    14161 tcatactgcc atttcattgg ataaaacagg tgatacaaaa acagcaaatg gtttttataa
    14221 agctttaaaa actaattatc caaattcacc cgaagcaaaa gcttcaccta atagaaaata
    14281 aattaaggag ataaaatggc tatagaaaaa aatagtgtag tttcaatgtt ttatgagtta
    14341 aaagatgcaa atacaaatga agttttagaa tcaaatttat attctcaacc tatttctttt
    14401 attttaggca aaggtcagat tttagaaagc ttagaagaag aagtgatgaa gcttgattgt
    14461 cctagcaatg ctgatgtggt aattaaaaaa gaaaaaggtt taggcgaata cgatgaaaat
    14521 gccgttcaaa ctttaccaaa agagcaattt gcaggtattg atttaaaagt aggtatggag
    14581 ctttttggcg aaggtgaaaa tggcgaaacc gttcgtgtaa ctgtaaaaga aattggtgaa
    14641 aatgatgtga caattgacta taatcatcct tatgcaggtc gtgatttgct tttttcttta
    14701 aatatcgtag atgctagagt tgcgagtgaa gatgaaattc ttacaggtat tatcgcagga
    14761 agtcatagtt gtggttgtgg aagcggacat ggacacgatc atcatcacgg acatggacat
    14821 ggtggcggcg gttgctgtgg tggcagcggt tgcggttgtc attaatgaat gctgcgttta
    14881 tatttccagg tcaaggctct caaagtcttg gcatgggaaa agatttttat gaaaactcta
    14941 taaaagccaa agaactcctt caaaacgcaa gtgatttttg taagattgat tttaaacatt
    15001 tgctttttga agaaaacgaa aaactcaatc aaagtgaatt tactcaaccc gccatcgttt
    15061 taaattcctt aatggcttat agtgttttac ttgaaaaaaa acctgattta agttcgaaat
    15121 ttgctttagg gcattctttg ggagaatttt cagccttagc tgtcaatggt gcttttgatt
    15181 ttttagaggc tctttctttg gtcaataaaa gagggctttt catgcaagaa gattgtgcaa
    15241 aagttgaagc aggtatgatg gtggttttgg ggcttgacga tgaaaaggtt gaagagcttt
    15301 gtcaaaaagc acaaaaagaa aacaagcaaa ttttcgctgc aaattataac tgcgatggac
    15361 aaatcgttgt agcaggttta aaacctgatt tagcaagtta tgaaagtgta tttaaagaag
    15421 caggagctaa aagagctatg cttttaaata tgagcgtggc aagtcattgt cctcttttgg
    15481 aaaatgcttc agctaagctt tgtgtggagc ttgaaaaggt gttaaaacca aattttaaag
    15541 ccgtaatttc taatgcaaat gccaaaattt atacaagaaa agaagaagcc cttgagcttt
    15601 taaaagcaca acttatctct cctgtgcttt ataaacaaag cattaaggca tgtgaaaatg
    15661 aagtagatta tttcatagaa tttggtgcaa gcgtgcttaa aggtttgaac aaaaaaatca
    15721 cttcaaaaga aacttatgct ttaacaaata tgaatgatat tgatgaattt ttaaaggtta
    15781 tatgatgaaa atagcaattt taggagccat gagtgaagaa atcactcctt tacttgaaac
    15841 acttaaagat tatacaaaag tggaacacgc taataatact tattattttg caaattacaa
    15901 aaaccatgaa cttgttttag cgtattctaa aattggcaaa gtaaattcta ctcttagtgc
    15961 aagtgtgatg atagaaaaat ttggcgcaca agtgttgctt tttacgggcg ttgcaggtgc
    16021 ttttaatcct gaacttgaaa tcggcgattt gctttatgcg acaaaattag ctcaatacga
    16081 tcttgatatt accgcttttg gtcatccttt gggttttgtt ccgggtaatg aaatttttat
    16141 caaaactgat gagaaattaa ataatcttgc tttagaagtt gctaaagaat taaatatcaa
    16201 acttcgtgca ggtattattg caacaggcga tgagtttatt tgtgatgaag caaaaaaagc
    16261 aaaagttaga gaaattttca atgccgatgc ttgtgaaatg gaaggtgcaa gtgtggcttt
    16321 ggtttgtgat gctttaaaag taccttgctt tattttaaga gctatgagtg ataaagcagg
    16381 ggaaaaggct gaatttgatt ttgatgagtt tgtgatcaat tcggctaaaa tttcagctaa
    16441 ttttgtgctt aaaatgtgcg agaaattatg ataaatctta gcaagaaact tatacgtcaa
    16501 gtcgcacaag ccaatgctaa atttggactt attaaagatg gagatagagt tcttttaggg
    16561 cttagtggtg gaaaagattc tttagctttg gttcatcttt taaatcgtat gcaagcacat
    16621 gctcctttta aatttgaact tgaagcaata actttaagtt atggtatggg tgaggattat
    16681 tctcatcttc atgcacattg tgaagaacac ggtattaaac atagtgtgct tgattcaaat
    16741 atttataaag tttcaggcga tactataaga gaaaattcga gtttttgtag ttatttttca
    16801 agaatgcgtc gtggagcttt atatacttac gcccttgaaa aaggttttaa caagcttgct
    16861 atagcacatc atttagatga tgcggctgaa agctttttta tgaattttat ttataatgga
    16921 gctttaagaa ccttagcgcc tatttatcaa agtaaacgtg gtataactgt gatacgccct
    16981 ttgatttttg tgcgcgaaag acagcttagg gataatgcta cgcaaaatga acttagtgtg
    17041 ataggaaatg aattttgccc tggtatgaag ttgagtgaaa aaaatgtaaa atttccacac
    17101 gccagagaag aagccaagca gcttttagca aatttagaaa aagaacaccc taagcttttt
    17161 acaagtttaa aaaccgcttt tgccaatcta cacacagaga gtttttggct tcaaaaggca
    17221 taaaattatg aaaaaagctt ttgttttagt agattatcaa aatgatttta ttgatggaag
    17281 cttaggtttt aataaagctt taaagattaa agaaaatatt cttaaagcct taaatcaaat
    17341 cgattttaat aacacgcatt tgcttttaac ctatgatacg catgatgagc attatctaca
    17401 aagtaaagaa ggtttaaatt tacctgtaaa acattgcatt aaagagagtt tgggttggca
    17461 aatgccaaag gaatttgaac cttttttaca aaaagctcat aaaatttttt ataaaaatac
    17521 ttttggtagc ttagaattag ctaatttcat acaaaaaagt gattatgaag aacttcattt
    17581 tgcagggctt gtttctcata tttgtgtgtt ttgtaatatt attttagctt ttggtgctaa
    17641 gcctaatgca aggataattt tacaccaaaa tttaagtgca agttttgatg aaaatttaga
    17701 aaaatccgct tttgatatac ttagggctta tggtattgaa attgtttaat gcaaggcttt
    17761 atacttcata ctcaaaaagt taaagatgag gatttgattg tttatatttt aagtcctaaa
    17821 atgcttatta aggcttatcg tttttatgga cttagacatt ctagtatttt aagcggctat
    17881 aaaatcgact ttgctttaga agaaaatcct agttttttac caagacttaa agatgtattg
    17941 catttgggat ttttatggat tatgcaaagg gataaaatgc ttatttggca agaatttatc
    18001 cgtcttttat ataggcactt aaaagatgta gaagagcttg atagttttta ttttgattta
    18061 cttgatgagt gtgtgaaaag gtttgaaaaa caaaatccaa agcgtgttat tgttgatgct
    18121 tatttaaaaa ttttggaatt tgaaggaaga ttacataaag attttttttg ttttgcctgt
    18181 gatgagaaaa ttcaaaattc cattacattg ctaagggctt ttttaccttc gcattctcaa
    18241 tgtgctttag gatttgagtt tgaagagaaa aaactaaaac aattttatag tagtaaaaat
    18301 tgtgcgattt ttgatgatga agaaatagaa aatttatatc atttgattaa ggaaggttta
    18361 tgatattaag tgatgaaaaa tgtgattttt tagaatctat agcaagtttt ttaagtccta
    18421 aagatgtgga gcttgtcttt gtggatagta aagaaatgca agaaattaac ttagagcaaa
    18481 gaaaacaaga taaaaccact gatgtacttt cttttccact tgaaaatatc gatgagagtt
    18541 tgcctttggg ttctgttgtg atcaatgtgg atttggcaaa agaaaaggct aaagagttag
    18601 ggcatagcta tgaagaagaa ataagcttgc tttttatcca cgctatgctt catttgttag
    18661 gttttgatca tgaaaatgat aatggagaaa tgagagaaaa agagaaagaa cttatagagc
    18721 attttaattt acctaaaagt ttgattgtaa ggactttgga agattaagta agattttttt
    18781 caagggctag aagacttgcg ctttatattt taaatatatg agtaaaaata ttaaaaaaaa
    18841 tcatttttgc cgatttactt tagaataaaa tttattccaa ggtgataaag atgatagtat
    18901 ttcctctaag ctcttttaat agatattttg gaaacaatcc tttgcaaaca cttaccaaaa
    18961 taagagatga aagtattgaa aatggaaatc ccgagcttac aaaaaaacaa agagaagaat
    19021 taggtaatga tttgatagat ttgtataaga tttctaaaaa attcagcgat aaaatagaat
    19081 tagtcgaggg ttcaatagaa gataagctta gaaacaatga attaccagaa tcagaagtta
    19141 aaaatttatt tcaatggatg gatgaaaatg ctaaacaccc tcgttggatg catattgatg
    19201 gcgtgagtta tgatgaagct tatgttaaaa tttttcacac aagcaaaagt atagatgaat
    19261 ttaaagaaaa atatcttgag cttcaaaaaa aatattttgt tgattttaac aatattgatt
    19321 catcgcagaa aaaactgcaa gaaacttcag aagaagacaa aaaagctttc aaacctatac
    19381 aagtagaaag taaaagcgaa acctacaaag atgataataa aatgaatgag cttttaagaa
    19441 aactactaga aactaaattt ggcacaagcg atgagctaga aattcttttt ggtatgaatt
    19501 ttagcaatga taatgcaggg gaatttaata aaattctttc tcaaaacact tcagcaaaaa
    19561 ttatagatat taaggcttaa gattttttaa attataaaaa tcaatcaagt taaactaaaa
    19621 aattcttcta ttttttttcg catttcttcg acattgtcga tacgattaac ggtatctcta
    19681 aaggctgaag cgtctttatg ccctttagaa tactcgtgta aatgcttgcg aaatatactt
    19741 acgccttgat ctttgtagtg ttttatcatt tcatcaaaat gagtgagtat gatttctttt
    19801 ttgagttttt catctacact tttaccgctt ttgatttcat aaaatatcca aggatttcct
    19861 acgcttgcac gccctatcat gagtccatca cattttgtga ttttataaac ttctttagcg
    19921 ttttgtgcgt taatatcgcc atttgcaatc acaggaattt tcacactcgc tttagcacta
    19981 gcaatggatc cataatcggc ttttccgcta taaagctgtt ttcttgtgcg tccgtggata
    20041 cttataaaat ccacccccaa gctttcacaa attttagcca ttttttcagg atatttttca
    20101 ttaaatccta gtcgaaattt cacacttgta aggctttttt tattgttttc tttaatcact
    20161 cctacaagat ttttaaaaag ctctaaattt tctagcaaag cactgccagc acattgttta
    20221 acaactttat ttacagggca accgcaatta aaatcgatcc catctacaaa atccatttca
    20281 tttagcattt gcactgcttt ttttagcact tctttatctc cacctgcaat ttggactata
    20341 tagggatttt ctaattcagc tctttctagc atatgtaaag ttttagaact ttcataaact
    20401 aaggcattag aacttatcat ttcacttatg gtaatatcag caccaaattt ttttactaca
    20461 ttacgaaaag gcagatctga aaaacctgcc ataggggcta aaaacagggg ttttttgcta
    20521 aaatctatca ttgtatgagt tgatttagat cgattttgat atttttttca cgcaaggcta
    20581 aaaaggcttt aaaatcatta aattttttat catcattgtg aatttgttct cttaactcat
    20641 ctaaaagtcc aaattcagcc aaaagatata aatatgctct taaagcttcg cttttttcat
    20701 ttttaatttt gttaaaaatt cctaaaatag catcaggatt taaaagttta gtacttagtt
    20761 ttgctgcatt aagatagtct ttttcgctta atatgttgtg tgaaagtaaa acttcatatt
    20821 ctgctacact aagttctaaa tttccttctt taaaacgctt gataagtgtg agaacttcag
    20881 aaggcttttt agggattttt acatttttaa tttgctcata actagctttt tctataagag
    20941 tgttaaaagc aatttcttca aattcatctt tgatttcatt aaggttttta agtttgttat
    21001 aggcataatt tgcatcattt ttgagatgat ttttttcatt ttgcaaatat aaaacattgt
    21061 tattttcgag tttaaatttg ctaaggttaa aaaattcgtt tttatttaaa ccatcaataa
    21121 gatctaaaat ttcattgatt ttatttgagt gtggaatttt ttcatgtgtt tttatggttt
    21181 taaaaagttg tgctacagat ctaaattctt ttgtttgaaa agtggtttta agatcttttt
    21241 caaggagtaa atcttgagta taagcttcaa atttagctgc atctttaaaa aaatgcttaa
    21301 attttaaata acgcaaaaat ccataaaatg ctatgtgtaa aacggctaaa atcatataaa
    21361 taaataaagg aataacaagc catatcataa taggtagttc aaaggtataa gtgctgatat
    21421 ttagagtata gcttcctagt tctagatgcc aagcaaaggc aaaaataagt gctatataaa
    21481 taaaacttgc aagtaagaag agtttaattt tcatgttttt ttccttgttc tgcaatttga
    21541 cggcaagtga tacaatatct tgcgtgaggt ttgactttta gtctttgaga gtcgatttca
    21601 tcatcgcaag attcgcaaat tccataagtg ccgtttttga ttttatctaa agaatcttcg
    21661 atttctataa gttcttcttt gagattggtg ctgatagcaa agtcaatttg agagcctgtt
    21721 tctatgacag aaaaatctac actatcgctt gggacgctat tgtgaagagc ttcgatttca
    21781 tttgaattgc tttgcaaatt ttctaagata gctttttttc tttcttctaa aatatttttg
    21841 a
//
LOCUS       DARATF010000020        21069 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.020, whole genome shotgun sequence.
ACCESSION   DARATF010000020 DARATF010000000
VERSION     DARATF010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21069
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.020"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..399
                     /locus_tag="SB502_000570"
     CDS             <1..399
                     /locus_tag="SB502_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0434045.1"
                     /translation="KFTFISKASHEDSKEIYSFFRKYFNQYLFYFSHKNLEEKISDIL
                     IYKENQKIRAALIYTQTLNTNFLDFIAVDRNLKHKNVAFALLNHYFAANTQNKFFKLF
                     VEEKNQKAINFYKRAGFCFNHINLKFYRNF"
     gene            399..1117
                     /locus_tag="SB502_000571"
                     /pseudo
     CDS             399..1117
                     /locus_tag="SB502_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049948.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formyl transferase"
     gene            1119..1346
                     /locus_tag="SB502_000572"
     CDS             1119..1346
                     /locus_tag="SB502_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0434046.1"
                     /translation="MQEIKQFFINIERTDINESMENLVSEDFIDSIDIMALVAEIEKF
                     YKKPLKAEFITPENFESFENIKKMLELAMKD"
     gene            complement(1343..2413)
                     /locus_tag="SB502_000573"
                     /pseudo
     CDS             complement(1343..2413)
                     /locus_tag="SB502_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344699.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            2514..3530
                     /locus_tag="SB502_000574"
     CDS             2514..3530
                     /locus_tag="SB502_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="HEG0434047.1"
                     /translation="MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQN
                     TGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSSLI
                     HKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDK
                     ITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETFPLKCFKEVNDFIDMDKNL
                     TFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETL
                     KNYGDVTINKLAFDLANYEWRKGGIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEII
                     DFNT"
     gene            complement(3843..5054)
                     /locus_tag="SB502_000575"
     CDS             complement(3843..5054)
                     /locus_tag="SB502_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0434048.1"
                     /translation="MLINQTFEIDSCDDVELNIKRTSKLEYRISYDDEKDIKAIVFIV
                     GGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFCARQSIDQKYNPKLIPNQDDLER
                     INDILKNINLGHLSVNKDNFEQIIPLIEQKVNEMKQAGLVDENQKIELSCDFIPPNGD
                     YQNYGIMAAIDHINVLKDLVKKFPNFKNLPKIYGGGSYGGYLSLLIAKIAPWHVDGVI
                     DNSGVCLPFLAHILGRDMNQGEFVFEGDNNRIYCFVQKYWTRNINSSYYFGDENYLIR
                     AVLNSNHLKIQASMNNNTIFISYHSMQDMGAPVQNKIELYKCYQELGYDATLYLVKDE
                     NDIDGRFIKSLEHGLRMTDKALFRKELPLMLEKLQGRKFDMSKNSITYPCKDKQFIFK
                     DKDDKFELEIV"
     gene            5146..5844
                     /gene="pseF"
                     /locus_tag="SB502_000576"
     CDS             5146..5844
                     /gene="pseF"
                     /locus_tag="SB502_000576"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HEG0434049.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFD
                     EIVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAAVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKNILKQAYEKFIQNESKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            5828..6649
                     /gene="pseG"
                     /locus_tag="SB502_000577"
     CDS             5828..6649
                     /gene="pseG"
                     /locus_tag="SB502_000577"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HEG0434050.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYSDVSFACLPLEGSLID
                     EIPYPVYELDSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIRDEFYKESKIEREKIWDY
                     FICIGGTDIKNLSMQIASDLPKNKKIAIATSSSNKNLKKLEKFIQNHENVKLFIDEEI
                     SKLMNESTKLIISASSLVNEALLLKANFKAVCVAKNQEKLANWLVQKGYEVEYRL"
     gene            6646..7149
                     /gene="pseH"
                     /locus_tag="SB502_000578"
     CDS             6646..7149
                     /gene="pseH"
                     /locus_tag="SB502_000578"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HEG0434051.1"
                     /translation="MIGLKDFTHLNGNEILLIWQWRNDEKISQFMKTKYIDFQEHLNF
                     ITSLKKDQSKKYFLVFKDDGAIGVIDFINIMQDSCEFGLYAKPDLKGIGQILIQEIKK
                     YAFENLKIKELKACVFKQNKKALDLYLKNGFYIKNEDKNMFYVEFMGGGIVKFQPKLL
                     IIKRLAV"
     gene            7146..7778
                     /locus_tag="SB502_000579"
     CDS             7146..7778
                     /locus_tag="SB502_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEG0434052.1"
                     /translation="MKIAILTSPNQWFIPYAKELNQQIKNSKLFYNHTEIFNFDIVFI
                     LSYHKIIDKNFLKHNKHNIVIHASNLPQGKGWAPLFHQVIEGKNEIAFSLFEADDKAD
                     NGDIYLQKNLKLNGLELYEELREKQARFTLDMCLEFLELYPDIQAKKQVGKESFYPKR
                     SPKDSELDINKSLNEQFNLLRIASNEDFPAFFYKDGKKFILKIYPDSIDR"
     gene            8038..9069
                     /gene="pseI"
                     /locus_tag="SB502_000580"
     CDS             8038..9069
                     /gene="pseI"
                     /locus_tag="SB502_000580"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HEG0434053.1"
                     /translation="MQIGNFNTDEKVFIIAELSANHAGSLEMALKSIKAAKEAGADAI
                     KIQTYTPDSLTLDCDKDDFIIKGGLWDKRKFYELYESAKTPYEWHSQIFEAAQDAGIL
                     CFSSPFAKEDVEFLKRFDPIAYKIASFEANDENFVRMIAKENKPTIVSTGIANEEELF
                     KICEIFKEEKNPNLIFLKCTSAYPAQISDMNLKGIASLKEKFGVEVGLSDHSFGHLAP
                     VMAVALGARVIEKHFMLDKNIKSEDSEFSLDFDEFKAMVEAVREAESALGDGSLALDE
                     KGLKNRVFARSLYASKDIKKDEIFSEENVKSVRPSFGLHPKFYKELIGKTATKDIEFG
                     TALKQGDFQ"
     gene            9066..10034
                     /gene="legB"
                     /locus_tag="SB502_000581"
     CDS             9066..10034
                     /gene="legB"
                     /locus_tag="SB502_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038816896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HEG0434054.1"
                     /translation="MKTLVTGADGFIGSHLCESLVQKGYKVRALSQYNSFNFWGHLEK
                     SPYLKDMEVVSGDLRDSFFCEKITQGMDAIFHLGALIAIPYSYEAPQSYVDTNVKGTL
                     NMLEAAKKNEISHFIHTSTSEVYGTARYVPIDEKHPLQPQSPYSASKIAADMMALSYY
                     NAFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGTKELKLGNLSPTRDLNFVLDTC
                     EGFISLLKLNHFGEVYNIGSGTEYSMQEVLDLIQKILNQNVKIIQDEKRLRPKNSEVF
                     RLKCDSSKLQNATHWQSKISLEEGLKLSIEYFKENLASYKSEVYNV"
     gene            10027..11169
                     /locus_tag="SB502_000582"
     CDS             10027..11169
                     /locus_tag="SB502_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LegC family aminotransferase"
                     /protein_id="HEG0434055.1"
                     /translation="MFENEIAFIKKLFNKEKIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVARFEEALKQRTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGARAIFLDIDENTLSLGPKALQNFLENHSYQKDGFTYNKITHKRIKACVVMHT
                     FGLSADIEKLCEICKNYNIFLIEDAAEALGSTYKNKALGTFGKCGILSFNGNKIITGG
                     SGGAILCDDENLANLTKHLSTTAKIPHPYEYDHDIIGYNYRLCNINAAILLAGLEKLD
                     FFLENKRELAQIYKEFFTNHKACKFIDERKNSKSNFWLNALCFKDGNLRNTFLQECLE
                     NNIFVRPVWKSLPSLKPFQTWQKDELLNTQKLEKCLVNLPSSVRLN"
     gene            11387..12508
                     /locus_tag="SB502_000583"
     CDS             11387..12508
                     /locus_tag="SB502_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HEG0434056.1"
                     /translation="MLYCDHCVMPNTRPGIKFFKDEKGKNICSACINHKNKEKIDYKA
                     RFKELENLCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHVMKEKLGMNPILFSVEDNFT
                     MTQAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGGDDKETPSAKAIFENGVASDLDINEFIDDEIKEENL
                     QLFFNPSADDLNKLDPIYLSYFIKWNSYSNYIFAKSRGFSDLQNEWDRSHCAENFDQI
                     DTIGYILHAWMKYPKFGHAMASDYASRFVRYGMMSREEAVKIVKEKDHKLDNKCIEDF
                     CNFTGISKTTFWKIVEKHYNLELFYKNEFNEFKLKNPLK"
     gene            12519..13199
                     /locus_tag="SB502_000584"
     CDS             12519..13199
                     /locus_tag="SB502_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0434057.1"
                     /translation="MQNSLQTYTQKYDENNYGLLYPDSHVIRFYERILKYKLGITSGN
                     LLDFGCGNGVHSKYFLDKGFKPFGIDIVPSLQKNWDAKIKISGGGDCKIIEPNSSIKG
                     LFDEKMDIVFANQSLYYIPKTELKQNILEFYECLNQGGILFATMMSEKNYYFSHSEKE
                     NENGLRKVSIQGRLNETTYIHFAKSIDELQELFKPFEALFLGDYDPINFYNFEGSAHH
                     FIYIGIKR"
     gene            13241..14245
                     /gene="legI"
                     /locus_tag="SB502_000585"
     CDS             13241..14245
                     /gene="legI"
                     /locus_tag="SB502_000585"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HEG0434058.1"
                     /translation="MKKALIIAEAGVNHNGDLNLAKKLIEVAAKSGADFVKFQSFKAE
                     LCVSKNAKKAAYQLKTTAKDESQLEMIKKLELDFNAHQLLISHAKQCGIAFLSTAFDL
                     ESIELLDDLGLEVFKIPSGEITNLPYLKKIAKLNKKIILSTGMSNLGEIEAALEVLCK
                     EGTQRANITLLHCTTEYPAPFNEVNLKAMQTLKNAFNLDVGYSDHTKGIHISLAAIAL
                     GASVIEKHFTLDKNMSGPDHKASLEPDELQELCTKIREIESALGDGIKQASKSERKNI
                     EIARKSLVAKKKIKKGEIFSEENLTTKRPASGISAMRYDEYLGKKASKDYEEDELIHE
                     "
     gene            14238..15413
                     /gene="legG"
                     /locus_tag="SB502_000586"
     CDS             14238..15413
                     /gene="legG"
                     /locus_tag="SB502_000586"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEG0434059.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCLEIQNDKDLELQIIATGAHLS
                     PEFGLTYKEIEKEFKIAKKIPILLASDDKISLCKAMALANIGFSEAFESLKPDIVVIL
                     GDRYEMLSVASVCLMMNLPIAHLCGGELTLGAIDDSIRHSISKMAHLHFVSTQTYKNR
                     LLQLGEEKNRVFNVGSLASTIMKNINFLDKNELAKVLEFDLGQNIYLITYHPVTLNLK
                     NSKKEIDILLKTLDELNNASLIFTKANADENGLLINEILKDYCEKNPKKAKLFDNLGS
                     QKYLSIMKIAKAMIGNSSSGISESPFFKTPCINIGSRQKGRLRTQNIIDCEFENLDQA
                     FEKLESKDFKQALHHFKNPYENDKNPNIIIKTCLKNANLDTILQKNFIDLRQNLGYK"
     gene            15400..16431
                     /locus_tag="SB502_000587"
     CDS             15400..16431
                     /locus_tag="SB502_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEG0434060.1"
                     /translation="MDINKLKLTPDSSIEEALKVVGKERVRLGIIVDKKDKFLGVISD
                     SNIRKALIKGKNLQSKIKDIYTKNPITIKENTSKNELLKLSAKTDIYDFPVLNDKKEI
                     ISIKSISSLLNRQVNSNFVIIMAGGLGTRLKELTKDTPKPMLKVGKKPILESIVQKLK
                     EQNFENFIFCVNYKKQIIEDYFKKGKNFGVKISYIKERKKLGTAGALSLIKQDFKESF
                     IVMNADILTELNFNELLKAHKDSKALMSVCVREFEQQIPFGVIEQNKGFITNITEKPV
                     QKFLVSAGIYVCEPEMLELLNKNEYLDMPELIKLAMQKGRVNTYLIHDYWIDIGRLDE
                     FVKANEDFK"
     gene            16428..17333
                     /locus_tag="SB502_000588"
     CDS             16428..17333
                     /locus_tag="SB502_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEG0434061.1"
                     /translation="MKVLIIGFGSIGKKHFLALNELRFLVDVLSKSYEFSHFEGKNFR
                     LFKDLEELNLQDYDLFIIANITTSHFKTLEFLDQNVKEKIILVEKPLFQKDMEFIPSN
                     NNQIYIAYLLRFHPMIQDLKQLIDEKEVYFAKFICNSYLPNWRKLDYRQNYSAKKELG
                     GGVMLDLSHEIDLAFYFFKELSLKFSQNLKISELEITSDDFTFLALSAKNTSIHIELD
                     YFSKLTQRKILFHTKENSFEADLVHNKLNIYDKTNNFKSKTYENDTFKTLQNMYKAIL
                     EKDQNLCTLGEARRVLRLCDKARNE"
     gene            17326..18033
                     /gene="legF"
                     /locus_tag="SB502_000589"
                     /gene_synonym="ptmB"
     CDS             17326..18033
                     /gene="legF"
                     /locus_tag="SB502_000589"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HEG0434062.1"
                     /translation="MSEILCTICARGGSKGVKNKNIRKINDLEMIAYSIIQAKNSKLF
                     KHIVISTDSEEIAKIALKYGGEVFFKREAHLASDTAAKIPVMRDALLRSEEYFKCQFD
                     TLIDLDASAPLRSSADIIKAFETFCQNQNDNLITAVPARRNPYFNLIEVQDGKVVKSK
                     SGNFTTRQSVPKCYDMNASIYIFKRDFLLQNDSVFGKNTGLFIMDESTAFDVDSELDF
                     KIVEFLIKEKNLQAKDF"
     gene            18033..18803
                     /locus_tag="SB502_000590"
     CDS             18033..18803
                     /locus_tag="SB502_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEG0434063.1"
                     /translation="MLENKIIFVAGACGRIGKALCKKILQNKGIAILADINENHLSIL
                     KTELENEFKKELLSLRLDITSKESLNCAIDQAFEKYSKIDSFVNSSYPVGKDWGKIAY
                     YEASYEQICESLNLHLGGFILASQEFVKFFKKQSYGNIINLSSIMGVFAPKFENYENT
                     TMQSSLEYSVIKAGINHLGAWLAKELFNTNIRVNTLASGGILDNQANIFLEKYRKCCA
                     SKGMLDAEDICGTLVFLLSDESKFVTGQTLVVDDGWGL"
     gene            18803..20662
                     /locus_tag="SB502_000591"
     CDS             18803..20662
                     /locus_tag="SB502_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0434064.1"
                     /translation="MNNELFLKNTQALFEVDQPLAYALRILKNIENYNIDKNSDGLNI
                     INKQMQKIYENPNQELLDQLVYFQTHYKKYPVLFFYGFGNGMLYKTLCENKNHKHIIV
                     FENTLELIALAFSLFDFSQEIKSEKLILFYTPNITTAQLTTLFTHPNIYNCLKIYKLH
                     IHSNFYQQLYNQEIKNLNTKLSETIKFIALNYGNDPKDSLIGIKHTLENLPKVLNHGI
                     FQDFLKERRGKVKNAIIVSTGPSLTKQLPLLKKYGHKMTIFCADSSYAILAKAGIKPD
                     YVLSLERVHYTSELFNNDFKDFDKDILFIISSLTHKNTLHYLEKNNRTYMLVHRPLES
                     AGILKLDNFGYIGVGYSVANMAYELASALRHENIILIGQDLAYAEDGSSHPKDYLYLE
                     QADNTDNTTTLAYGKNGLVKTTLTWNLFRQTFEKDIFWTKEKLNINTYNCTEGGAYIE
                     GSIEKPFLWACENLLDESLNKPFSFPKSLSKKEANDKIDKIKKILQSAILQANKLIKS
                     TQKELNKLKFELNRDEINLQTLEKIRKKLLISFKEYKKLKLFNELSRALYFHNECEIV
                     KYEAMDDENQKKYLSHFLKLQYNWFAQGLGYLDTQNKIIQEALQNWHFDDIKE"
     gene            20683..>21069
                     /locus_tag="SB502_000592"
     CDS             20683..>21069
                     /locus_tag="SB502_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0434065.1"
                     /translation="MNFTSNQQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNL
                     DINLRNTKDNTLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGILFKALLQNKHR
                     QHIVIFENDIEILWIMFHLLDFSCEIK"
BASE COUNT         8027 a         3016 c         3252 g         6774 t
ORIGIN      
        1 aaatttacct ttatctctaa agcttcacat gaagatagca aggaaattta tagctttttc
       61 agaaaatatt ttaatcaata tttgttttat ttttcgcaca aaaatcttga agaaaaaata
      121 tctgatatac ttatctataa agaaaatcaa aaaattcgcg ctgctttgat ctatactcaa
      181 actctcaata caaatttttt agattttata gccgtagaca gaaatttaaa acataaaaat
      241 gtagcttttg ctttactaaa tcattatttt gcagccaata ctcaaaataa attctttaaa
      301 ctttttgtag aagaaaaaaa tcaaaaagcc attaattttt ataaaagggc gggtttttgt
      361 tttaatcata ttaatttaaa attttatagg aatttctaat gacttactca tatatttaca
      421 tcataggcac aggcaaagta gccaaagaat gccaaaaaat agctaatgat tttttcagac
      481 aagaagtaaa ttttgtaaaa aatatagaaa atttagatga tttctttaaa aatcttaaaa
      541 attgccttat tattagtgct aataattttt atattttcaa aaaagaatgt attcaaaaaa
      601 atactattat taattaccac aacgcattat taccttttca cagaggatgt aatgcacata
      661 tttggagtat atgggaaaac gataaaaaaa caggtattac ttggcatatg gttaaagaaa
      721 gtatagatac aggtgatatt ttagttcaaa aagaaataaa acttgataat aattgtactg
      781 ctttaagtct tttaaacgct caacacaaac ttgctctaac tttatttaga gaagctttag
      841 aaattttaaa aaataaagct tttaaaatgc aaatttcagg ggggggtatc acaaaaaatt
      901 atctttacca aataatggtt atttagatct tacttggaat aaagaaaaaa tttctcgctt
      961 tttaagagct atggactgcg gtgccttaag cggagttcct aaagctagat tagaaatatt
     1021 aggtgaagaa agagaaattt tattttatga aatcaatgag cttgatttaa ttttaaattt
     1081 aagcgataat gtcattttaa aaatcacaaa ggaataaaat gcaagaaatc aaacaatttt
     1141 ttatcaatat agaaagaaca gatatcaatg agagtatgga aaatctagta agtgaagatt
     1201 ttatcgatag tatcgatatc atggctttgg ttgccgaaat agaaaaattt tataaaaaac
     1261 ccttaaaagc agaatttatc acacctgaaa attttgaaag ctttgaaaat atcaaaaaaa
     1321 tgcttgaact tgcaatgaaa gactaatctt tccttgcaag ttcaagctgt tcttttaaag
     1381 aactgatgat ttcattttta gaaacaataa tttgtgctat aaaatccgcc acatcatccc
     1441 aatctttact tagcatatgg gttaaagtat aattttgttc atattcttcc caattcacag
     1501 gagtaaaaag agaattttta tgcgggaaat atttgttttt tacccattca agtgaagaag
     1561 caaaataatc cacataagct ttagcaatat ctttttgcac tgcaaatttt aatctttttt
     1621 ctttgctgcc ttcaaatttt cttcttgcca taaaaagcaa agaattaaga ttatcctgct
     1681 ttaaatcttt ttgatttaat cttgacataa gctccattcc taaaagatta aaactttcat
     1741 ttttggtttg ttttaaaaca aaactctcat cccattcaag tcctaaatga taaacaaaat
     1801 ccttaagtaa agtccctcct acataatcct cccttagaag tcttactatc aaattttctt
     1861 ctccaaatac ctcagcatga gttttgcaaa tccattcata gtcaaaaata tattttctag
     1921 gatgatcttg cggagcaaaa tcagcagaat aataccccat attgttttta tgatcttgag
     1981 aacaatgtga gtttaaataa cccaaagtat ctctaaaata cacaataata taaatttgag
     2041 taaaacctaa ctctctcata atcttttcta aaatttctac atgttttttg gtagaaaaat
     2101 cccaaactat accctcagct gaaaaaataa atttttatct ttatgtaaag cactttcgct
     2161 tttaaaattt tctatagctc taagaagtct ttcatttgtg atatgactta aaatactctc
     2221 tttttgcaaa atatcttctt tttgaactag ttctaaaacc atatctacca aagcccaatg
     2281 cctatttgcc actctaaggc tttttggata aatatagcct tttttttaaa agcctttctt
     2341 cgttttgcat caagaagcct tgtttttctt gatttcctgt attagtagtt cctatatgta
     2401 aatatgctgt cattttatat cctttcttta caaaaaatta tactccgttt gtgcttaaat
     2461 tttaagcatt cataagttac aatttatcta ttaaatacta gaaagaagta aaaatgaatt
     2521 taaaattaaa ctcacacaat attaaggcta ttagtatagt tttacccaaa aatccacata
     2581 ccttagaaaa agaattacaa gaatgcaatt taaaccagaa aaaatacgaa cttttaaagc
     2641 aaaataccgg tataaatcat catttcataa gccctaataa tatctatgca agtgatttag
     2701 caagcaaagc actagaaaag ctttttagag aaaatttgct tttaaaagat gagcttgatg
     2761 tacttttagt ttatagtttt tcaccagatt ttctagcccc tgcactttca agtttaatcc
     2821 ataaaaatct tggtttaagt gaaaaaactc tgtgttttga taatattgct ttttgcccag
     2881 gatttttaca aggcctaatg caagcttttt ctttactaga taatgaaaat atcaaaaaaa
     2941 tagctttcat ttgcgtaagt gtaaaaagta aaaaaatacc caaaaaagat aaaatcacct
     3001 accttagtaa tagcgacagt gctagtgtta ttttgcttga aaaatctaat acaaaagaaa
     3061 aagctttttt ctcgcaaaaa atcttttcca aattagccac agaagaaact tttcctctaa
     3121 aatgctttaa agaagtaaat gattttatcg atatggacaa aaatctcaca ttttctcact
     3181 taaatgaaaa ttttcctcga ttttttgatg atttttttga taattttaaa cttgataaaa
     3241 gcaaaatagg cgaatttttc tttggaagtg caaataattt tataaaaact aaattattag
     3301 aactcttaaa tttcaaagaa attaaaaatg atgaaacttt aaaaaattat ggcgatgtta
     3361 cgataaataa attagccttt gatttggcaa actatgaatg gaggaagggg ggcataaaac
     3421 aagtttttat ggctagtttt ggcacaggaa ttacctttaa tgccatgagt ttgaaaattg
     3481 attttagcaa aattaaaaac tttatcgaaa ttattgattt taatacttga aaaaatatac
     3541 tatgtttcaa gcgtagattt tatttaagca taggctaaaa caatgcggtg gaaaaattag
     3601 agttatttat caactcaagc aactcatttg ccatcttcaa cagaaaatta ttttaaagtc
     3661 tttttctatt attggtagca cctttttcac caagagaaat taaccactta aacaaatcat
     3721 tatacaaaaa tatttcactt tttttaaaaa aatcataaat ttaattttta tattaggcaa
     3781 ggaaatatcc atctacaaag cccctcccta gcaatccttt cttaacttta ctaacgataa
     3841 tcttaaacaa tttcaagctc aaatttatca tctttatctt taaaaataaa ttgcttgtct
     3901 ttgcaaggat aagtgataga atttttactc atatcaaatt ttcttccttg tagtttttca
     3961 agcatcaaag gaagttcttt tctaaataaa gctttatcag tcattctaag accgtgctct
     4021 agacttttta taaatctacc atctatatca ttttcatctt ttaccaaata caaagtcgca
     4081 tcatatccta attcctgata acacttataa agttctattt tattttgcac tggagcgccc
     4141 atatcttgca tgctgtgata gcttataaag atagtattat tgttcatact tgcttgaatt
     4201 ttgagatgat ttgagtttaa aacagctcta attaaataat tttcatcacc aaaataataa
     4261 gaagaattta tatttctagt ccaatatttt tgcacaaaac aataaattct attattatct
     4321 ccttcaaaaa caaattctcc ttgattcata tctcttccca aaatatgtgc taaaaatggc
     4381 aagcaaactc ccgaattatc aatcacacca tctacatgcc aaggagctat cttggctatc
     4441 agtaaagata aatatcctcc ataagatcct cccccataaa tctttggaag gtttttaaaa
     4501 tttggaaatt tttttacaag atcttttaaa acattgatat gatcaatagc tgccataatg
     4561 ccatagtttt gataatctcc attaggtggg ataaaatcac aagaaagttc tattttttga
     4621 ttttcatcaa ccaaacctgc ttgtttcatt tcattaactt tttgctctat aagaggaata
     4681 atttgttcaa aattatcttt attaaccgat aaatgtccta aattaatatt ttttaaaata
     4741 tcattgatac gctctaaatc atcttgattg ggaataagct ttggattata cttttgatca
     4801 atactttgtc ttgcacaaaa acaatgataa aaaacatgta ccactacaac atcaaaattt
     4861 ttagcaatat attccctatc aaaatctaaa aaagaaatat ttgcattagc tccaaaacca
     4921 cccactataa aaactatggc tttgatatct ttttcatcat catagctaat gcggtattca
     4981 agtttgctag ttctttttat atttaattct acatcatcac aagaatcaat ttcaaaggtt
     5041 tgatttatga gcattattcc accccatttg cattatttta ttgtatttta aagacaatta
     5101 tacttaaatt ttagtaaaat aaaacacaaa aaacaaggct taactatgaa aaatctttgc
     5161 ataatccctg ctcgtggtgg atcaaaaaga attcctagaa aaaatatcat tgattttcta
     5221 ggtaaacctt taatcgctta tagcatagaa aatgctttaa attcaggtat ttttgatgaa
     5281 atagtacttt caagcgacga tgaagaaatc atagaagtag ccttaaaata cggtgcaaaa
     5341 gctccatttg tgcgtgataa aaatttaagc gatgattatg cttcaagcac tgctgcagtg
     5401 caaaatgcca tagaaatttt acaaagccaa aatcaaattt atgatcatgt ctgttgtctt
     5461 tatgctactg ctccgctttt aaataaaaac attttaaaac aagcttatga aaaatttata
     5521 caaaatgaaa gcaagttttt atttgccgcc actgagtttg agtatcctat acaaagggct
     5581 ttttatctaa atgagaataa tcaagtttat atgtttgatg aaaaacatta taaaagtcgt
     5641 tcacaagact taacaaaagc ttatcacgat gcaggagctt tttattttgg cacaagtaaa
     5701 gcttggcttg aagaagattt tatatttaaa cctcattcta gtgtatttgt attgccaaga
     5761 aatttagttt gcgatataga taccatacaa gatttagaat ttgcaaaaat actttataag
     5821 gtaaatcatg aaagtgcttt ttagaagcga tagctccagt caaataggct ttggacacat
     5881 taaacgtgat ctagtcttag ctaaacaata tagcgatgta agttttgctt gtttgccttt
     5941 agaaggctct ttgatcgatg aaattcctta tcctgtttat gagcttgata gtgaaagcat
     6001 ttacgaactt atcaatctca tcaaagaaga aaaatttgaa cttcttatca ttgatcacta
     6061 tggcatcagc gtagatgatg aaaaactgat caagcttgaa acaggggtga aaattctaag
     6121 ctttgatgat gaaataaagc ctcatcattg tgatatttta ctcaatgtca atgcctatgc
     6181 aaaagcaagt gattatgaag gtttagtgcc ttttaaatgc gaagtaagat gtgggttttc
     6241 ttatgcttta attagagatg aattttataa agaaagcaag atagaaagag agaaaatttg
     6301 ggattatttc atttgcatag gtggcacaga tatcaaaaat ctttccatgc aaattgcctc
     6361 tgatttgcct aaaaataaaa aaattgcaat cgctacaagc tcatccaata aaaatctcaa
     6421 aaaacttgaa aaattcatcc aaaatcatga aaatgtaaag ctctttatcg atgaagaaat
     6481 ttcaaaatta atgaatgaaa gcacaaagct tatcatcagt gctagttctt tagtcaatga
     6541 agctttgctt ttaaaggcta attttaaagc cgtttgtgtc gctaaaaatc aagaaaaact
     6601 agccaattgg ctagttcaaa aaggctatga agtggagtat agactttgat aggcttaaaa
     6661 gatttcactc atttaaatgg aaacgaaatt ttgcttatat ggcaatggcg caatgatgaa
     6721 aaaataagcc agtttatgaa gacaaaatat atcgattttc aagagcattt aaatttcatt
     6781 actagcttga aaaaagatca aagtaaaaaa tattttttgg tttttaaaga tgatggggct
     6841 attggcgtga ttgattttat caatataatg caagattctt gcgaatttgg actttatgca
     6901 aagcctgatt taaaaggcat agggcaaatt ttaatacagg aaatcaaaaa atacgccttt
     6961 gaaaatttaa aaataaaaga attaaaagct tgcgttttta agcaaaataa aaaggcttta
     7021 gatttatatt taaaaaatgg tttttatatt aaaaatgagg ataagaatat gttttatgta
     7081 gaatttatgg gggggggtat agtcaaattt caacctaaac ttcttattat aaaaaggcta
     7141 gcagtatgaa aatagccata cttacctcgc ctaatcaatg gtttatccct tatgctaaag
     7201 aacttaacca gcaaatcaaa aattccaagc ttttttacaa tcatacagag atttttaatt
     7261 ttgatatagt atttatactt tcttatcata aaatcataga taaaaatttt ctaaaacaca
     7321 acaaacacaa tatcgtcatc catgcttcaa atttacccca aggaaaaggc tgggctccac
     7381 tttttcatca agtcatagaa ggcaaaaatg aaatcgcctt ttcgcttttt gaagcagacg
     7441 ataaagccga taatggcgat atttatttac aaaaaaacct taaattaaat ggcttagaat
     7501 tatatgaaga gctaagagag aaacaagctc ggtttactct agatatgtgt ttagaatttt
     7561 tagaacttta tcccgatata caagcaaaaa aacaagtggg caaagaaagt ttttatccta
     7621 aaagaagtcc aaaagatagc gagcttgata taaataaaag tttaaatgaa caatttaatc
     7681 tcttacgcat agctagcaat gaagattttc cagcattttt ttacaaagat ggtaaaaaat
     7741 ttatactcaa aatttatcca gattccatag atagataaag gtctaaataa ttagtatttt
     7801 atttttaaaa atttttaaaa caaagctcta tatatttaag cttataattt tctaaaaata
     7861 aaaatcttaa aattaaaaat ttttcaagaa aacttgcagg ttatcaattt gcacaaaaat
     7921 ttggttttgg cgttaccaaa gaaacaatca aacatgataa aaaaattttt atcatgcaat
     7981 tagttttttt aaaaaaagtc gatataatgc aaaataagaa ccataaaagg caaaatcatg
     8041 caaataggaa attttaatac cgatgaaaaa gtttttatca tagcagagct gtccgcaaat
     8101 cacgcaggaa gtcttgaaat ggcacttaaa agcataaaag cagctaaaga agcaggagca
     8161 gatgcgataa aaattcaaac ctacactcca gatagtctca cgctagattg cgataaagat
     8221 gattttatca tcaaaggggg actttgggat aagcgcaaat tttatgagct ttatgaaagc
     8281 gctaaaactc cttatgagtg gcattctcaa atttttgaag ccgcacagga tgcgggtata
     8341 ctttgttttt caagtccttt tgcgaaagag gatgtagagt ttttaaaacg ctttgatccc
     8401 atcgcctata aaatcgcctc ttttgaagca aatgatgaaa atttcgtgcg tatgatcgcc
     8461 aaagaaaaca agcctaccat cgtttcaact ggtattgcaa acgaagaaga gctttttaaa
     8521 atatgtgaaa ttttcaaaga ggaaaaaaat cctaatctga tctttttaaa atgcacttca
     8581 gcttacccag cacaaatttc tgatatgaat ttaaaaggta ttgcaagttt aaaagaaaaa
     8641 tttggcgttg aagtaggact tagtgatcat agctttggac acttagctcc tgttatggct
     8701 gttgcgcttg gggctagagt gatagaaaaa cattttatgc ttgataaaaa tataaaaagc
     8761 gaagatagtg aatttagtct tgattttgat gaatttaaag ccatggtgga agcagtaaga
     8821 gaggctgaaa gtgctttggg tgatggctcc ttagccttag atgaaaaagg tcttaaaaac
     8881 cgcgtttttg ctagaagttt atatgcaagc aaagacatca aaaaagatga aatttttagc
     8941 gaagaaaatg taaaatcagt gcgtccttct tttggtcttc atcctaaatt ttacaaagaa
     9001 cttataggaa aaactgctac taaagatata gaatttggca cagctttaaa acaaggagat
     9061 tttcaatgaa aaccctagta acaggtgcag atggttttat aggctctcat ctttgtgaga
     9121 gtttggttca aaaaggctat aaagtaagag ctttaagtca atataattct tttaactttt
     9181 ggggacattt ggaaaaaagt ccttatttaa aggatatgga agttgtaagt ggggatttaa
     9241 gagatagctt tttttgtgaa aaaatcaccc aaggaatgga cgctattttt catcttggag
     9301 ctttaattgc cattccttat tcttacgagg caccgcaaag ttatgtagat actaatgtaa
     9361 aaggtacttt aaatatgcta gaagctgcga agaaaaatga aatttctcat tttatacaca
     9421 cttctacaag cgaagtttat ggcactgcaa gatatgtgcc tattgatgaa aagcaccctt
     9481 tgcaacctca aagcccctat tctgctagta aaatcgcagc ggatatgatg gcgcttagtt
     9541 attataatgc ttttaattta aatgtaaata ttgctcgccc tttcaatacc tatggaccaa
     9601 gacaaagcgc aagagccatt atacccacta tcataacaca aattttaagt gggacaaaag
     9661 aattaaaact tgggaattta agtccgacaa gggatttaaa ctttgtcctt gatacttgcg
     9721 aaggctttat ctcgcttttg aaattaaatc attttggaga agtgtataac ataggctctg
     9781 ggactgaata ctcgatgcaa gaagtgcttg atcttataca aaaaattcta aatcaaaatg
     9841 taaaaatcat ccaagatgaa aaaagattgc gcccaaaaaa tagtgaggtt tttagactaa
     9901 aatgcgattc aagcaaactt caaaatgcaa cccattggca aagcaaaata agtcttgaag
     9961 aaggcttgaa actaagcata gaatatttta aagaaaattt agcaagttat aaaagtgaag
    10021 tttacaatgt ttgaaaatga aattgctttt attaaaaaac ttttcaataa agaaaaaatc
    10081 gccttgcacg aaccttgctt tatcggaaat gaaaaaaaat atctcttaga atgcattgat
    10141 agcggttttg tttcaagcgt aggtgagttt gtagcgcgtt ttgaagaagc tttaaaacaa
    10201 agaacaaaag ctcgatttgt tatcgctaca aatacaggca ccgccgcact tcatatcgct
    10261 ttacttgcaa atggtattga tgaaaattgt gaggtgatta cccaaagtat tagctttgtt
    10321 gcaacggcaa atgctattgc ttacacagga gctagggcta tttttttaga tattgatgaa
    10381 aatactttaa gtttaggccc taaagcttta caaaattttt tagaaaatca cagctatcaa
    10441 aaagatggct ttacttacaa taaaatcaca cataagcgca tcaaagcttg tgttgtaatg
    10501 cacacttttg gccttagtgc tgacatagaa aagctttgcg aaatttgtaa aaattataat
    10561 atttttttaa tcgaagatgc cgccgaagct ttaggaagca cttataaaaa caaagcttta
    10621 ggtacttttg gaaaatgtgg aattttaagt tttaatggaa acaaaatcat cacaggtgga
    10681 agtggcggag cgattttatg cgatgatgaa aatttggcaa atcttacaaa gcatttaagt
    10741 actactgcta aaatacctca tccttatgaa tacgatcatg atatcatagg ctataattat
    10801 agactgtgca atataaatgc cgcaatttta cttgcgggac ttgaaaagct agatttcttc
    10861 ctagaaaaca aaagagaatt ggcacaaatt tataaggaat tttttacaaa tcataaagct
    10921 tgtaaattta tagatgaaag aaaaaattca aaaagcaatt tttggctcaa cgctttatgt
    10981 tttaaagatg gaaatttaag aaatacattt ttacaagaat gtttagaaaa caatattttt
    11041 gtgcgtcctg tatggaaaag cttacctagc cttaaacctt ttcaaacttg gcaaaaagat
    11101 gagcttttaa atactcaaaa attagaaaaa tgtttggtaa atttacctag cagtgtaaga
    11161 ttaaactagg aataatatat accaatattt tataagatat aaaaatattg tatatgtaaa
    11221 caaaaatttt tatcaataaa aagctttaaa aacagtattt taaacaggaa aataaaacac
    11281 atatcttata tattacaaat ataaaataag aatatattaa attaatgttc gatatactct
    11341 aaacattttt taaaaaaaat aataaataat taagggggaa accaaattgc tttactgtga
    11401 tcattgtgtc atgccaaata caaggcctgg tataaaattt ttcaaagatg aaaaaggtaa
    11461 aaacatctgt tctgcttgta tcaatcataa aaacaaagaa aaaattgact ataaagcaag
    11521 atttaaagag cttgaaaatc tatgtgataa ataccgcaga atgaatggta aattcgaata
    11581 cgattgtgct atagctgtaa gcggaggcaa ggattcacat tttcaagtgc atgtcatgaa
    11641 agaaaaactt ggaatgaatc ctattctttt tagcgttgaa gataatttta ccatgacaca
    11701 agcaggcaag aaaaatctta aaaatttaag cgaaactttt ggttgtcata tcattagctt
    11761 aaaacctgat atcaaaactc aaaaaaaagt tatgctaaaa acctttgaaa aatatggaaa
    11821 acctacttgg tttattgata gactgattta cagctatcct tttgctatgg ctttaaaatt
    11881 taatacacct ttattggttt atggggaaaa tgtaagttat gagtatgggg ggggggacga
    11941 caaagaaacg cctagtgcaa aagcgatctt tgaaaatggg gttgcaagcg atttagatat
    12001 aaatgaattt attgatgatg aaataaaaga ggaaaatctt caacttttct ttaatccaag
    12061 cgctgatgat cttaataaac ttgatccgat ttatcttagt tattttataa aatggaattc
    12121 ttactcaaat tatatctttg ctaaaagtcg tggatttagt gatttgcaaa atgagtggga
    12181 tagaagtcat tgtgctgaaa attttgacca aattgatacc ataggataca tactgcacgc
    12241 ttggatgaaa tatccaaaat ttggtcatgc aatggcaagt gattacgcat ctcgttttgt
    12301 gcgttatgga atgatgagta gagaagaagc tgtaaaaatc gtgaaagaaa aagatcataa
    12361 actagacaat aaatgtattg aagatttttg taattttaca ggcattagca agactacttt
    12421 ttggaaaatt gttgaaaagc attacaatct tgaacttttt tacaaaaatg aattcaatga
    12481 atttaaactt aaaaatccat taaaataaag gaaataaaat gcaaaattca cttcaaacct
    12541 atactcaaaa atatgatgaa aacaattatg gacttttata tcctgattct catgtaatac
    12601 gattttatga aagaatttta aaatacaaac ttggcattac aagcggaaat ttacttgatt
    12661 ttggttgtgg caatggggtt cattctaagt attttttaga taagggcttt aaaccttttg
    12721 gcatagatat tgtgccaagt ttgcaaaaaa attgggatgc aaaaatcaaa atttcagggg
    12781 ggggggattg taaaatcata gagccaaatt ctagtatcaa agggcttttt gatgaaaaaa
    12841 tggatattgt ctttgcaaat caaagccttt attatatccc taaaacagaa cttaaacaaa
    12901 atatcttaga attttatgaa tgcttaaatc aaggtggaat actttttgct acaatgatga
    12961 gtgagaaaaa ttactatttc tctcatagcg aaaaagaaaa tgaaaatgga ttgcgtaagg
    13021 ttagtataca gggtcgctta aacgaaacaa cctacattca ttttgctaaa agtattgatg
    13081 agttgcaaga actttttaag ccttttgaag ccttattttt gggtgattat gatcctatta
    13141 atttttataa ttttgaaggc tcggctcatc attttattta cattggtata aaaagataaa
    13201 aattttttgc ctttattgaa ggcaaaataa aggtaaaaaa atgaaaaaag ctttaatcat
    13261 agcagaagca ggggttaatc acaatggtga tttaaatttg gccaaaaagc tgatcgaagt
    13321 tgctgccaaa agtggagctg attttgttaa atttcaaagt ttcaaagccg aactttgcgt
    13381 gagtaaaaat gctaaaaaag cagcttatca gctaaaaacc acagctaaag atgaaagtca
    13441 attagaaatg attaaaaaac tagagcttga ctttaatgca caccagcttt taatctctca
    13501 tgctaaacaa tgtggtatcg cttttctttc aacggctttt gatttagaaa gtattgaact
    13561 tttagatgat ttaggacttg aagtttttaa aattccaagc ggagaaatca caaatttgcc
    13621 ctatctaaaa aaaattgcaa aattaaataa aaaaatcata ctctccacag gaatgtcaaa
    13681 tttgggcgag atagaagcgg ctttagaagt actttgcaaa gaaggcaccc aaagagcaaa
    13741 tatcacccta cttcactgca ctaccgaata ccccgcaccc tttaatgagg ttaatttaaa
    13801 agctatgcaa accttaaaaa atgcttttaa tcttgatgta ggctattcag atcacaccaa
    13861 aggtatacat atttctttgg ccgctatcgc cttaggggca agcgtgatag aaaagcattt
    13921 taccttagat aaaaatatgt caggacctga tcataaagcc tctttagaac ctgatgagct
    13981 tcaagaactt tgcacaaaaa ttagagaaat cgaaagtgct ttaggtgatg gcataaaaca
    14041 agcaagcaaa agcgaaagaa aaaatatcga aattgcaaga aaaagcctag tagctaaaaa
    14101 gaaaatcaaa aaaggagaaa tttttagcga agaaaacctt accacaaaac gccctgctag
    14161 tggtataagt gcgatgcgtt atgatgagta tttgggcaaa aaagccagta aagattatga
    14221 agaagatgag ctaatccatg agtaaaagaa aaatttgcat agtcagcgca acaagggctg
    14281 agtggtatct tttaagaaat ttatgccttg aaatacaaaa tgataaggac ttagagctcc
    14341 aaattatcgc tacaggagcg cacttaagcc ccgaatttgg actaacttat aaagaaatag
    14401 aaaaagaatt taaaatcgct aaaaaaattc ctattttact cgcaagcgat gataaaataa
    14461 gcctttgcaa agctatggct ttagcaaata ttggctttag cgaagcattt gaaagcttaa
    14521 aacctgatat cgtagtaatt ttaggcgatc gttatgaaat gttaagcgtg gctagtgtat
    14581 gcttgatgat gaatcttccc atagcccatc tttgcggcgg agagcttacc ttaggagcca
    14641 ttgatgatag cataagacat agcatttcta aaatggcaca tttgcatttt gtaagcactc
    14701 aaacttataa aaatcgtctt ttgcaacttg gagaagaaaa aaatcgtgta tttaatgtcg
    14761 gatctttggc aagtactatt atgaaaaata tcaatttttt ggataaaaat gagcttgcaa
    14821 aagtcttaga atttgactta ggacaaaata tttatttaat tacctatcat cctgtaactt
    14881 taaatttaaa aaattctaaa aaggaaatcg atattttatt aaaaacttta gacgagctta
    14941 ataatgcaag tttgattttt accaaagcaa atgcagatga aaatgggctt ttgatcaatg
    15001 aaattttaaa agactactgc gaaaaaaatc ctaaaaaagc taaacttttt gacaatcttg
    15061 gctcacaaaa atatcttagc attatgaaaa tagctaaagc catgatagga aatagctcaa
    15121 gcggtataag cgaaagtcct ttctttaaaa ccccttgtat caatatagga tcaagacaaa
    15181 aagggcgttt aagaactcaa aatatcattg attgtgaatt tgaaaattta gatcaagctt
    15241 ttgaaaagct agaaagcaaa gattttaaac aagctttaca tcattttaaa aacccttacg
    15301 aaaatgacaa aaatccaaat ataatcataa aaacttgcct aaaaaacgcg aatttggata
    15361 caattttaca aaaaaatttc attgatttaa ggcaaaacct tggatataaa taaactcaaa
    15421 ctcacacctg attctagcat tgaagaagcc ttaaaagtag taggaaaaga acgcgttcgc
    15481 cttggaatca ttgtcgataa aaaggataaa ttcttaggtg tcatcagtga ttcaaatatc
    15541 agaaaagctt tgataaaggg taaaaattta caaagcaaaa tcaaagatat ctatactaaa
    15601 aatcctatta ccatcaaaga aaatacaagc aagaatgaac ttttaaaact aagtgcaaag
    15661 actgatattt atgattttcc tgtgctaaat gacaaaaaag aaatcatttc tataaaatcc
    15721 atttcttcct tgttaaaccg ccaagtaaat tcaaattttg tcatcataat ggcaggtgga
    15781 cttggaaccc gtttaaaaga attgaccaaa gatactccaa aacctatgct aaaggttgga
    15841 aaaaagccta ttttagaaag tatagtgcaa aaattaaaag agcaaaattt tgaaaatttt
    15901 atcttttgtg taaattataa aaaacaaatt atcgaggatt attttaaaaa aggtaaaaat
    15961 tttggtgtaa aaatttctta tatcaaagag cgcaaaaaac taggtacagc aggggcttta
    16021 agtcttatca agcaagattt taaagaaagc tttatcgtaa tgaatgcaga tattttaacc
    16081 gagctcaatt ttaacgagct tttaaaagca cataaagatt ctaaagcttt aatgagtgtg
    16141 tgtgtaagag aatttgagca gcaaattcct tttggggtga tagaacaaaa taaaggcttt
    16201 atcacaaata tcacagaaaa gccggtgcaa aaatttttag taagtgcagg aatttatgta
    16261 tgcgagcctg aaatgttaga acttttaaat aaaaacgaat accttgatat gccagagctt
    16321 attaaactag cgatgcaaaa aggtagagta aatacttatt taatccatga ttattggatc
    16381 gatataggaa gacttgatga gtttgtcaag gcaaatgagg attttaaatg aaagttttaa
    16441 tcataggctt tgggagcata ggaaaaaaac attttttagc cttaaatgaa ctgagatttt
    16501 tagtagatgt gctttcaaaa agctatgaat tttcgcattt tgaaggtaaa aactttagac
    16561 tttttaagga tttagaagaa ttaaatttac aagattatga cttatttatc atcgcaaata
    16621 tcactacaag tcattttaaa actcttgaat ttttagatca aaatgtaaaa gaaaaaatca
    16681 tacttgtgga aaaaccttta tttcaaaagg atatggagtt tattcctagc aacaataatc
    16741 aaatttatat tgcttatctt ttaagatttc atcctatgat tcaagattta aaacaactca
    16801 tcgatgaaaa agaagtttat tttgctaaat ttatttgcaa ttcttatttg cctaattggc
    16861 gaaaacttga ttataggcaa aattatagcg ccaaaaaaga gctaggtggt ggggtaatgc
    16921 ttgatttatc ccatgagatt gatttggctt tttatttttt taaagaactt tctttaaaat
    16981 tttctcaaaa tttaaaaatt tcagagcttg aaataacaag tgatgatttt acttttttgg
    17041 cattgagtgc gaaaaatact tcaattcata tcgagcttga ttatttttca aaattaactc
    17101 aaagaaaaat tctttttcac accaaagaaa atagctttga agccgattta gttcataata
    17161 aattaaatat ttatgacaaa actaacaatt ttaaaagtaa aacttatgaa aatgatactt
    17221 ttaaaacctt acaaaatatg tataaagcga tcctagaaaa agatcaaaat ttatgtactt
    17281 taggagaagc aaggagggtt ttaagattgt gtgataaggc aagaaatgag tgaaatttta
    17341 tgcacaattt gtgcaagagg tggaagcaaa ggtgttaaaa ataaaaatat acgcaagatt
    17401 aacgatcttg agatgatagc ttatagcatt atccaagcta aaaattcaaa actttttaaa
    17461 catatcgtta taagcacaga tagtgaggaa atagccaaaa tagcgctaaa atatggcggc
    17521 gaagtttttt tcaaaagaga agctcatcta gcaagcgata cagctgctaa aattcctgta
    17581 atgcgtgatg ctttgttaag aagtgaagag tattttaaat gccaatttga caccttaatc
    17641 gatcttgacg cttcagcgcc gcttagatct agtgctgata tcataaaagc ttttgaaaca
    17701 ttttgtcaaa atcaaaatga taatctaatc accgctgttc ctgctagacg caatccttat
    17761 tttaatctaa tcgaagtgca agatggaaaa gttgtaaaat ccaaatcagg aaattttacc
    17821 acacgccaaa gcgtacctaa atgttatgat atgaatgcaa gtatttatat atttaaaaga
    17881 gattttttac tgcaaaatga tagcgttttt ggtaaaaata cagggctttt tatcatggat
    17941 gaaagcactg cttttgatgt agatagcgag cttgatttta aaatagtaga atttttgatc
    18001 aaagaaaaaa acttacaagc aaaggatttt taatgctaga aaataaaatt atatttgtag
    18061 caggagcttg tggacgcata ggcaaggcgc tttgtaaaaa gatattgcaa aacaaaggca
    18121 tagccatttt agccgatatc aatgaaaatc atttatctat attaaaaaca gaactcgaaa
    18181 atgagtttaa aaaagagctt ttaagtctta ggcttgatat tacttctaaa gaaagcttaa
    18241 attgtgccat cgatcaagct tttgaaaaat actctaaaat cgatagcttt gtaaattcta
    18301 gctatcctgt aggaaaagat tggggcaaga tagcttatta tgaggcttca tatgagcaaa
    18361 tttgcgaaag tttaaatttg catttgggtg gatttatctt agcttcgcaa gaatttgtga
    18421 aattttttaa aaaacaaagt tatggcaata tcatcaatct tagctctatt atgggggttt
    18481 ttgcgcctaa atttgaaaat tatgaaaata ccaccatgca aagttctttg gaatacagcg
    18541 tgatcaaagc aggaattaat catcttggtg cttggctcgc aaaagagctt tttaatacaa
    18601 acattcgtgt aaatacctta gcaagtggtg gaattttaga taatcaagct aatatttttt
    18661 tagaaaaata ccgcaaatgc tgcgcaagta agggcatgtt agatgcagaa gatatttgcg
    18721 gaaccttggt atttttactc agtgatgaga gcaaatttgt cacaggacaa accttagttg
    18781 tagatgacgg atgggggctc taatgaataa tgaacttttt ttaaaaaata cccaagcgct
    18841 ttttgaagta gaccaacctt tagcatatgc gttaagaatt ttaaaaaata tcgaaaatta
    18901 taatatagat aaaaatagtg atggtttaaa tataatcaat aagcaaatgc aaaaaatata
    18961 tgaaaatccc aatcaagaac ttttagatca acttgtctat tttcaaactc actataaaaa
    19021 atatcctgtt ttattttttt atggttttgg aaatggtatg ctttataaaa ccttgtgtga
    19081 gaataaaaat cataaacata tcattgtctt tgaaaacacc ttagagttaa tagctttagc
    19141 ttttagtttg tttgatttta gtcaggaaat aaaaagtgaa aaattaatcc tattttatac
    19201 accaaatatt acaacagcac aacttactac actttttact catccaaata tttataattg
    19261 tctcaaaatt tataaattgc acatacattc taatttttat caacaattat acaaccaaga
    19321 gataaaaaat ttaaacacaa aactaagtga aactattaaa tttatagctt taaattatgg
    19381 aaatgatcct aaagattctt taataggcat aaaacacacc ttagaaaatc ttccaaaagt
    19441 tttaaaccat gggatttttc aagattttct caaagaaaga aggggtaaag ttaaaaatgc
    19501 tatcatagtt tcgacaggcc caagcctaac caaacagctt cctttattaa aaaaatatgg
    19561 tcataaaatg accatatttt gtgcagattc ttcttatgcg atacttgcca aagcgggtat
    19621 caaaccagac tatgttttat ccttagaaag agtgcattat accagtgaat tatttaataa
    19681 tgattttaaa gattttgata aagatatttt atttattata agctctttaa ctcacaaaaa
    19741 tactcttcac tatcttgaaa aaaacaatag aacatatatg cttgtacacc gtcctctaga
    19801 atctgcagga atactaaagc ttgataattt tggatatata ggagttggat atagtgtagc
    19861 caatatggct tatgaactag caagtgcttt aagacatgaa aatatcattc ttataggtca
    19921 agatttagct tatgctgaag atggaagctc tcatccaaaa gattatcttt acctagagca
    19981 agcagataat acagacaata ctactacttt agcatatgga aaaaatggac tagtaaaaac
    20041 aacattgaca tggaatttat tcagacaaac ttttgaaaaa gacatatttt ggacgaaaga
    20101 aaaattaaat atcaacacct ataattgcac cgaaggtgga gcatatatag aaggcagcat
    20161 agaaaaacct tttctttggg cttgtgaaaa tttattagat gaaagcctca acaaaccttt
    20221 ttcttttcca aaaagtttat caaaaaaaga ggcgaatgat aagatcgata aaataaaaaa
    20281 aatactacaa agtgctattt tgcaagcaaa taaattgatc aaaagcactc aaaaagaact
    20341 taataaactt aaatttgagt taaatagaga tgaaattaat cttcaaacct tagaaaaaat
    20401 tcgaaaaaaa ttacttatct cttttaaaga atataaaaaa cttaaattgt ttaatgagct
    20461 cagtagagct ttatattttc acaatgaatg tgaaattgta aaatatgaag ctatggatga
    20521 tgaaaaccaa aaaaaatatc tatctcactt tttaaaactt cagtataatt ggtttgcaca
    20581 aggacttgga tatctagata ctcaaaacaa aatcatacaa gaagctttac aaaattggca
    20641 ttttgacgat ataaaagaat gaaagaatac acaggaaaag aaatgaattt tacctcaaat
    20701 caacaagaaa tatttaagca aaatatcaat gctctagtta acgaaatact tagaaaaaaa
    20761 ttacaaaaaa ttaaaaatac taaatttgaa cttctcttgg gtaacgataa cctagatatc
    20821 aatttaagaa atacaaagga taacaccctt ctttatataa ataccattga tgaattaaac
    20881 tctatgttag aaatttacaa tgacaaatat ttactttatc ctgtgcttta tttctatgga
    20941 tttggaaatg gaattttatt taaagccttg cttcaaaaca aacaccgcca acatatagta
    21001 atttttgaaa atgatataga gattctttgg ataatgtttc atcttttgga tttttcttgt
    21061 gaaattaaa
//
LOCUS       DARATF010000021        20454 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.021, whole genome shotgun sequence.
ACCESSION   DARATF010000021 DARATF010000000
VERSION     DARATF010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20454
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.021"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            24..1367
                     /locus_tag="SB502_000593"
     CDS             24..1367
                     /locus_tag="SB502_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEG0434066.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLAMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGLIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKIVVVASIFLILSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            1378..2028
                     /locus_tag="SB502_000594"
     CDS             1378..2028
                     /locus_tag="SB502_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEG0434067.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEEALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(2025..2696)
                     /locus_tag="SB502_000595"
     CDS             complement(2025..2696)
                     /locus_tag="SB502_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HEG0434068.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGFKASMEHKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTLNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQKYAKTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACK
                     ALNLA"
     gene            complement(2702..3328)
                     /gene="upp"
                     /locus_tag="SB502_000596"
     CDS             complement(2702..3328)
                     /gene="upp"
                     /locus_tag="SB502_000596"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEG0434069.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEV
                     SKDFSLKEIEISTPIQKTIVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIEVCNFLKSQGVKKIKFISIL
                     AALQGLQKFSQTHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(3325..4560)
                     /locus_tag="SB502_000597"
     CDS             complement(3325..4560)
                     /locus_tag="SB502_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEG0434070.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSHDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEIDVHSVEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKDVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDTIVGTGRSDYPNQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFNEKAYFESLK"
     gene            complement(4562..5953)
                     /locus_tag="SB502_000598"
     CDS             complement(4562..5953)
                     /locus_tag="SB502_000598"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEG0434071.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNVKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDEC
                     KKRIENFLKVRGK"
     gene            6018..6833
                     /gene="salC"
                     /locus_tag="SB502_000599"
     CDS             6018..6833
                     /gene="salC"
                     /locus_tag="SB502_000599"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HEG0434072.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKAL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLTQNKTTLNAFKANLKSK
                     NQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI
                     YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(6870..8201)
                     /locus_tag="SB502_000600"
     CDS             complement(6870..8201)
                     /locus_tag="SB502_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEG0434073.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTVFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(8203..8658)
                     /gene="accB"
                     /locus_tag="SB502_000601"
     CDS             complement(8203..8658)
                     /gene="accB"
                     /locus_tag="SB502_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEG0434074.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            8806..9366
                     /locus_tag="SB502_000602"
     CDS             8806..9366
                     /locus_tag="SB502_000602"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEG0434075.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            9415..10419
                     /gene="pseB"
                     /locus_tag="SB502_000603"
     CDS             9415..10419
                     /gene="pseB"
                     /locus_tag="SB502_000603"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HEG0434076.1"
                     /translation="MFNGKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            10421..11551
                     /gene="pseC"
                     /locus_tag="SB502_000604"
     CDS             10421..11551
                     /gene="pseC"
                     /locus_tag="SB502_000604"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HEG0434077.1"
                     /translation="MLTYSHQNIDQSDIDTLTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGVQEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNKELITKIKLLRSHGIIKKRLWDS
                     DMIELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGVGVQVHYKPTYEFSFYKKLLGEIKLRN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCE"
     gene            11544..11745
                     /locus_tag="SB502_000605"
                     /pseudo
     CDS             11544..11745
                     /locus_tag="SB502_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858234.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            11678..11887
                     /locus_tag="SB502_000606"
     CDS             11678..11887
                     /locus_tag="SB502_000606"
                     /inference="COORDINATES: protein motif:HMM:NF021459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2172 domain-containing protein"
                     /protein_id="HEG0434078.1"
                     /translation="MKLWAGGGILKFHSIKSGTKVFDWIVPDEWNVKEAYIITSEGEK
                     ICDFKKHNLHLLNYSEAIDKEIELE"
     gene            11918..12855
                     /locus_tag="SB502_000607"
                     /pseudo
     CDS             11918..12855
                     /locus_tag="SB502_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            12852..13637
                     /locus_tag="SB502_000608"
     CDS             12852..13637
                     /locus_tag="SB502_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002884337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
                     /protein_id="HEG0434079.1"
                     /translation="MKYFLEHNDKKYSDKDLIDAFYQLGIKRGDILCVHTELFKFGIP
                     LLSRNEFLQTILNCFFEVIGQEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNKYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLAKENGKYIIFGLNEGHA
                     LVHYAEEKNTTFCRYFKNFKGILINEKRKEKTITIDYYVRDLQQSYLCDINKINPIIQ
                     ETQNYKKINFAKNFIEIYNTREYVQAICQALTNDKLAIYKKDR"
     gene            13634..13858
                     /locus_tag="SB502_000609"
     CDS             13634..13858
                     /locus_tag="SB502_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0434080.1"
                     /translation="MMKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFSKDELSQLKSQNELLKAIKEKLC"
     gene            13884..14760
                     /locus_tag="SB502_000610"
                     /pseudo
     CDS             13884..14760
                     /locus_tag="SB502_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807225.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            14760..16323
                     /locus_tag="SB502_000611"
                     /pseudo
     CDS             14760..16323
                     /locus_tag="SB502_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
     gene            16313..17374
                     /locus_tag="SB502_000612"
     CDS             16313..17374
                     /locus_tag="SB502_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEG0434081.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPNFFMPSTACY
                     LHQLLNLSPKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLVCGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNETFFELGSDGRHFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGTGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            17374..17595
                     /locus_tag="SB502_000613"
     CDS             17374..17595
                     /locus_tag="SB502_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0434082.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLINLAKLD"
     gene            complement(17609..18837)
                     /locus_tag="SB502_000614"
                     /pseudo
     CDS             complement(17609..18837)
                     /locus_tag="SB502_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            18898..20406
                     /locus_tag="SB502_000615"
     CDS             18898..20406
                     /locus_tag="SB502_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEG0434083.1"
                     /translation="MTTHIYDFLEKSLIKFSEKTAFVEPFAKKRKEITYKDFDLFSKK
                     LASEILKTLGNDNPTQAPVLIILPKGIDCLISFFGVALSGNFYTLLDEKSPKERVEKV
                     IEVLKPKLFITSKDLNFNLDLPTLYTQDFESFNIDESLLKNAKEKHIDTNLLYVFFTS
                     GSTGIPKGVSIAHKSVIDYTFWVCETFKFDENEILANQAPFYFDNSILDIFSSVKSGA
                     TLHLLPNHLFAFPNKILECLEKEKVSTIFWVPSVLIYFANTEALNNFSLNVLKKILFC
                     GEIMPNKQLNIWRKHLPNALFANLYGPTEITDVCSFYIINRTFKDEELLPIGKACKNT
                     ELLVFDENMNFISPKQIGVKGELFVRGTSLSLGYYNDKEKSKQAFIQNPLHDNYLDLL
                     YKTGDIVSYNEFGELLCYGRADNQIKYMGHRIELGEIESVINSHANIKNSACIFKEDI
                     ICFYESEEEIDLKAFLKDKLPSYMIPKNFIKLDKFKLNQNGKIDRKVLKELV"
BASE COUNT         7186 a         3276 c         3122 g         6870 t
ORIGIN      
        1 gatcattatc aaatggaaat tttttgaaac aatttggact agatagacga acttttaaaa
       61 ttttactagc tggttatatt attattgcat tgtttggggc tttattgcta cattcaagct
      121 gggcacatac aactcctatt gattttttag atgccttttt tacaagcaca tctgctgtta
      181 gtatgacagg attagtagtt aagaacactg cggttgattt taccttagca ggacaaatta
      241 ttatcttagc tttggtgcaa attggaggct tgggatatat gggtataggt ttatttgttt
      301 atatactcat acgcaaaaaa gttggtttta gtgcaagaaa tttactaaaa gagtctttat
      361 tttatccatc aatggatggt ttatttaaat tttttaaaaa ggttttgctg ttcattttta
      421 ctatagaatt gataggtgct atacttcttg ccatgcgttt tgcccttgaa atgaatttta
      481 agaaagcttt atggtttgga atttttcatt ctattagcgc ttttaataat tctgggttta
      541 ctatatttga acatgggctt atagcttata aacatgatat agcaattaat cttattatca
      601 cttctttgat tattattgga gggcttggat attttgtttt ggttgaatta tacttttttc
      661 aaagaaaaaa attgcaaaat ttaagcctac atacaaaaat agttgttgtt gcaagtattt
      721 ttcttatact ctcttcaaca cttattattt ttgcttttga atactcaaat cctcaaacta
      781 taggacattt ttcatttttt gataaaattt taagctcata ttttatcgct attaactacc
      841 gtacagcagg atttaatacc ttagatatgg gacatttgca tgatgcaagc ttattttttg
      901 gatcattgtt tatggttatt ggtggtgcac caggtggaac agctgggggt atgaaagtaa
      961 caactgtaat ggttttattg ctctatgctt attggagtat ccgcgatgga agagttagaa
     1021 tttttggaca tgaaattcca agagaaacta tatctaaagc ttttatcata gctgtaggtt
     1081 cagctgttta tatagtaata gctgttattt tgctttcctt gctagagtca aaatttgatt
     1141 ttatagcctt gctttttgaa acttcttcag cttttgcaac tgtaggaatt tcagtaggaa
     1201 atggtggaac tttatcttta tgcgctttgt ttagtgatcc tagcaaggta attatcatca
     1261 ttatgatgct aagtggtagg ataggtgttt ttgctttttt actctcggta ttcaaacaag
     1321 acaaagctat tcatttaaaa ttccctgaag gaaaggttaa tttataaagg taaaatcgtg
     1381 aaaaatctta attatggaat tataggactt ggaaaatttg gctcagttgt agcagatgaa
     1441 ctcattgctg gaggtcatac tgttatcgtt gcagataaag atgaggaagc tttaaaaagc
     1501 atacaaaatc ctccaagtta tgcttatatt ttagattcta caaatatttc agccctaaaa
     1561 gaagcaggct ttcatgatgt tgaagttgtt attgtcagca taggagaaaa tgttgaaaaa
     1621 tcaatcctta ctcttatggc gcttaaagat ataggtgtta aaaatatcat tgctaaagca
     1681 acctctaaca tccatggtca aattctttct aagttaggcg ccacaaaggt tatttatcct
     1741 gaaaaagaaa gtgctaaaag actagtaaaa gaatttttaa ccaaagatgc tgattatgaa
     1801 gtttttgatc tttcagcaaa tactatacga gctattaaga tcaatataga tgaaaaatta
     1861 gcaggaaatt ctttaaaaca tgtagcacaa aatatgaaag tgatttctta taaaaaatta
     1921 aatagcgact gggaaatact acctgattta gaaaccacga cagtttatag tggagatgtt
     1981 gtaattctcc ttggaacagt taaggaactt agagaatttg aacactaagc aagatttaaa
     2041 gccttgcaag cctttacaaa acgctttaag gctgtttttt ctttggtaga aattttatga
     2101 tatataactt catctaaata atatctaaca tcttttatat ctaaatccct tgttttggca
     2161 tatttttgaa gtatataata gggaatttta atctttgttt ttggaaattt tttcaaaatt
     2221 tgtttatata aagctttttt ttgcacacaa gaaaatctag caaaaacaaa aggcaatcct
     2281 gttttttcat gccattttgc acataaatcg atatatttag aaggatcttt tagataaagc
     2341 tttaaagcct tatcgcctat aattactttt ccatcttgtt ttaatacttt agctaaagca
     2401 tttgaagttg ctgaacttgg atctttggca tttaatgtat ttttttctac taaaacactt
     2461 aaaactcttt tattggcaca aatacccaaa tctaaatttt tatatttttt tctagcgctt
     2521 tctatgcttg aaatgatagc tgcatcaatt cttctataaa ataaatcttt atttagctta
     2581 cttggaactc cttttttatg ctccatactt gctttaaaac cattaggtaa gggatatttc
     2641 ttaagatata tatgcaaagg taaaagatta atataatcaa tttttccaaa aatcatctct
     2701 tttaaagagt gttaaacact ctatctcctg catctccaag ccctgggata atataacctt
     2761 tttcatttaa accttcatca atacaagcca caaaaacttc tacatcatca tgcgtttggc
     2821 taaatttttg caaaccttgt aaagcagcaa gtatggatat aaattttatt tttttaactc
     2881 cttggctttt taaaaaatta caaacctcta tagcagtccc acctgtagca aacataggat
     2941 ctataacaat agcggtgcgt ttttttgcat ctttgggaag tttttgaaaa taaaaatccg
     3001 cctttaaagt ctcttcattt ctcacaaacc ccaaaaatcc aacacttgca tcaggaatca
     3061 tcttaaaaac actttcaagc attcctaatg cagctcttaa aataggacaa atcataatct
     3121 tttcatcaag tttttttact atagtttttt gtataggtgt tgaaatttca atttctttta
     3181 aagaaaaatc tttactcact tcaaaaagca aaaaagatga aatttcatcg attaacatac
     3241 gaaattgaaa gggctttgtc tctttagccc ttaaaattcc taacttatgt tcgatcaatg
     3301 gatgattgat acaatgaata tttttcattt taagctttca aaataagctt tctcgttaaa
     3361 attttttacc ttagccacac catcttttac cgcagctgct gctacagctg tacttactgc
     3421 agcttttact ctttcatcaa aaggttttgg tatgacataa tctcttccaa attctaaggt
     3481 acttaaatta taagcctttt taactgcatc acttacagga agttttgcaa gatctgctaa
     3541 tgctttagca gccgctactt tcatattttc agtgatttta cttgcacgca catctaaagc
     3601 cccacggaaa ataaaaggaa aacctaaaac attattgatt tgatttggat aatcacttct
     3661 tcctgttcct acaatcgtat cttttctaag tctagctaca tcttcaggca tcacttcagg
     3721 aataggattt gccaaagcaa aaatcacagg atcttttgcc atgcttaaaa ccatttcatc
     3781 atcaagaatt tttggcgcac taagtcctag gaaaacatca gctcctttta aaacgtcttt
     3841 taaagtcttt tccttagaat caacagcaaa ttcaagcttt tgaggagtta aatcatttct
     3901 atctttagaa atcactcctt tgctatctac taaaataata ttttcaaccc ctaaatttct
     3961 atacatctta gcacttgcta tacctgcggc acctgcgcca cttacaacca ccttaatgtc
     4021 tttaaatttt ttaccgctta tctccattgc attcataagc cctgcagttg aaataatagc
     4081 tgttccgtgc tgatcatcgt gcattacagg aattcctaaa tcttgcaaag ccgcttcgat
     4141 ttcaaaacat tttggagcag ctatatcttc taaatttatc ccgcccacag ttggagccaa
     4201 agctttgcaa aaatttacaa tctcttccac actatgaaca tcaatttcta tatcataagc
     4261 attgacattt gcaaattttt taaacaaaca agccttacct tccataacag gttttgaagc
     4321 ctgcgctcct atgtttccaa gtcctaaaac agcagaacca tcactaacta tagctactaa
     4381 attagcctta tttgtataag tataagcaag ctcattatct ttagcgattt caaggcaagg
     4441 ttctgcaact cctgggctat acgccaaaga tagatcatgg cttgtagcca ttggcttact
     4501 tggtacaata tcaattttcc cacctaaatg gtattttaaa gcttcttctt ttaaattcat
     4561 tttattttcc tctaactttt aaaaaatttt ctattctttt tttgcactca tcaacctcta
     4621 aaaattctaa tacttcaaaa atactaggac ttaccgcact ccctgttaaa gctatgcgta
     4681 taggctgagc caaatctttt aactttgctt cttttttttc taaaaaatca tttgtaaaat
     4741 cttcaaaatc tttacctgtt ttttgatctt taagtgtatt agcaaatgct tggagcaatt
     4801 ctaaattatt tttgttaata aatttttgta ctgcattttc atcataattt tgcggtgcat
     4861 taactatact ttttgcacca ttgataatat catgcaaggt ttttgcacgc tctcttaata
     4921 aatcaagtaa aaatcctgcc ttttcataaa cagataaatc aaagccaaga tccttaagct
     4981 gacggttaat ctcttcaaaa ggcaaagttt taatataatg agcgttaagc cattcaagct
     5041 ttttaacatt ataacaagat gcgcttttat taatatgata agggtcaaaa agttttttca
     5101 aatcttctaa tgaaaaaacc tcatcatcac catggctcca acctaaacgc acaagaaaat
     5161 taagcaaagc ttgaggtaaa attcccattt ctttgtattc cataacatca gttgccccat
     5221 gtctttttga aagcttttta ccatcttctc catgtatcat agccacatga aaaaatttag
     5281 gaattttaaa acccaatgcc tcataaagca caatttgttt aggagtattt gaaagatgat
     5341 catctccgcg aatcacatca cttaccccca ttaaagcatc atcaataaca acagtaaaat
     5401 tataagttgg agttccatca cttcttgcaa tgataaaatc atccattata tcctctgctt
     5461 taaatctcac ctcgccttta accccatctt caaaaacaat ctcaccgctt tgaggtgctt
     5521 taatacgcac aacaggctct ataccctgag gtggcgtgcc tgtaaattct ctatatcttc
     5581 catcatatct tgggcgctct ttggcagctt cttgcttggc gcgcaattct tctaattctt
     5641 ctttactcat ataacaataa tacgctttac cttcatctaa aagcttttta acatattctt
     5701 tataaagatc aaaacgctct gattggtaag ttacttctcc atcatgttct aaaccgcacc
     5761 atttaaaagc ttcgataatt gctttagtag cttctttgga atttcttttt aaatccgtat
     5821 cttcgatacg aagtaaaaaa tttccaccat tttttctagc gtataaataa ttataaagag
     5881 ctgttctaag tccacctatg tgcaaatacc ctgttgggct tggagcaaaa cgcgttgtaa
     5941 gtttttcgtg cattttttgc cttttcttaa atttttattg atataatgcg atatttatac
     6001 ttaaataaag gtttgaaatg aaaaaaattt tattaagttt tgcatttttt gcaagtttag
     6061 ctagtgcaaa taccattaat gctatagccg tagttgtaga taaagagcct atcacaactt
     6121 atgatataga tcaaactatg aaagcactta aaattgatag aaataaagct ttaggcgtac
     6181 tcatcaatga aaaaatggaa atttcacaaa tgaaacaact aggtattgta gtcaatgatc
     6241 tagagcttga tgatgctata aataaaatgc ttactcaaaa caaaacgact ttaaatgctt
     6301 tcaaagcaaa tttaaaatcc aaaaatcaaa gctatgaaca atttcgtgca aattttaaaa
     6361 aagatttaga aaaaagaaag ctttatgaaa aaatcgcaag tatggcaaaa actgatttta
     6421 gtgatgatgg agcaaaaaaa tttttcgaac aaaataaaga taaattcact ttttatacac
     6481 aaattaatgc aaatatttat ctatcaaaca atcctcaaac tttagaaaat atcaaaaata
     6541 caaaaaaaac aatccttaaa ccacaaaatg catctttaaa cacaagtaat gccgatccaa
     6601 gacttttagg gcttttatca caaattcctg ttggaggctt ttcccctgtt ttaaatggaa
     6661 aaaatggcta tgaactctat gaagttaaaa gcaaagatgg ggcacaaact cctgaatatg
     6721 aacaagttaa aaatgaagtt ttaaacgctt atgtaagcga acaaagacaa aatttcatac
     6781 aggattattt tgataaactc cgctctaaaa tcaatataga atatttaaga taaaaattac
     6841 aattaaaatt tccctttaat agggaaattt taatgtcttg caagataatt tgtatcgtaa
     6901 ttattattaa taaaatcagg attttccatc atagaaagat gaaaatcttt ggttgttttt
     6961 atcccactta taagcaactc atctaaagct actttcattt ttgcaatagc tttattacga
     7021 tcttctgccc aaactacaag tttgcctatc atagaatcat aataaggagg cacgctatag
     7081 tcttgataac aatgactttc cattctgaca ttgcgtcctg cgggtggaat gtatttagta
     7141 atcttacctg gacttggcaa gaaagttttg gaatcttcgg ctgtgattct acattctata
     7201 gaatgcccat ttaatttaat actttcttga gatggtaaag cataaccttc tgctacttta
     7261 atcatttgtt ctatgatatc aatcccactt accatttcac ttacacagtg ttcaacttgc
     7321 aaacgcgtat tcatttctat aaaataaaaa tccaaatttt tatctaccaa aaactcaaaa
     7381 gttcccgcac cttcatatcc tatagcttta gctgccttaa tagcagtttc atgaagtcta
     7441 gtgcgtgttt tttcatcaag caaaatcgca ggggattctt ctataagttt ttgatggcgt
     7501 ctttgcatag aacaatctct ttcgcccaca tgaatcacat tgccaaaact atctcctata
     7561 acctgtactt ctatatggcg tggattttgt atgtattttt ccatatacat agttccatcg
     7621 ccaaatactg tcatagcctc gctttcagcc gaccaatacg ctttttcaag atctttttca
     7681 ttttcaacca cacgcatacc acgaccacca ccacctgcag ctgcttttaa aatcacagga
     7741 taacctattt ctttggcaag ttttttagct gcttcagctc ctgccaaagc cccatcgctt
     7801 cctgggatca caggtacgcc tgctctttgc atgacttgtt ttgcttttga tttatcactc
     7861 attaaattca tagcttccac agaaggacct ataaatttga tgttatgttt agcacaaatt
     7921 tcaacaaaat tttgattttc acttaaaaat ccgtatcctg gaaaaatcgc atctgcttca
     7981 gcaatttcag ctgctgtaat aatggctggg atatttaaat agctttcaga acttcttgct
     8041 ttgcctatac aaatgcttgc atcagcgtat tttaaataca aagcatcttt atctgcttca
     8101 gagtacacac aaattgcttt tttgcccatt tctttaatcg ttcttaaagc acgcagtgct
     8161 atttctccac gattagcaat taatatgctt ttaatttcca ttttataatt tctccaccgc
     8221 aaataaaggc attccaaatt ctacaggctg accatcagca actaaaattt cagcgatcct
     8281 acaatcaaat tccgcttcaa tttcattcat gattttcatc gcttcgataa tagctatagt
     8341 atcgcctttt ttaaccgtac tacctacttt tacaaaaggt gctgcacctg gacttggagc
     8401 ttgatagaaa gttcctacca tagggctatt tatacttggt ttgtttgatt ttacactttg
     8461 actaggttga gcttcgttta caacgcttac attgataggt tgtggagctg gaactggagg
     8521 acaaacagga gctggaacat cgcagcacat atctctttca agttctattt caaaaccatc
     8581 ttgttctttg atcttaattt tactaatatt tgcttcagca aaaaggttta ctaactcttt
     8641 aatttcttct tttgtcataa aattctccta caaaatttaa gaacttaacc ttgtattata
     8701 taaaaaaact tgaaatttaa ctttaaaaaa gaaaaaaatc ataaaaaata tagatttttt
     8761 aggttataat ccttacaaac aattacaaat attaaaaggt taaaaatggg cttaaaagcg
     8821 gataattgga taagaaaaat ggcattagaa cacaagatga tcgaaccatt ttgcgaagca
     8881 aatataggaa aaggtgtggt aagctatgga ctttcaagct atggttatga tatacgcgta
     8941 ggacgtgagt ttaaaatttt taccaatgtt aattcaactg tagtggatcc aaaaaatttc
     9001 gtagaagaaa atgtagtaga ttttgaaggt gatgtatgta tagttcctgc aaattctttt
     9061 gccctagcta gaactataga gtattttaaa atgcctgatg atgtcttagc tatttgtctt
     9121 ggcaaaagca cttatgcaag atgtggtatc atcgtcaatg ttaccccttt tgaaccaggt
     9181 tttgaaggac atattactat agaaatttca aatactacgc ctttacctgc aaaaatttat
     9241 gctaatgaag gcatagcaca agtgttgttt ttacaaggtg atgaaaaatg tgacaccact
     9301 tataaagata aaaaaggcaa gtatcaagct caaacgggca taaccttgcc aagaatttta
     9361 aaataggaac acttgttgct ttaattttaa aaaacttaag caaaggaagg caaaatgttt
     9421 aacggaaaaa atatcttaat cacgggcgga acaggctctt ttggaaaaac ctatactaag
     9481 gttttgctag aaaattataa acctaataaa atcatcattt attctcgtga tgagctcaaa
     9541 caatttgaaa tggcaagcgt ttttaatgct ccttgtatgc gttatttcat aggagatgta
     9601 agagataaag agcgtttaag tgctgctatg cgtgatgtgg attttgttat acatgctgct
     9661 gcaatgaagc atgtgcctat tgctgaatat aaccctatgg aatgtataaa aacaaacata
     9721 cacggtgcgc aaaatgtcat cgacgcttgt tttgaaaatg gggttaaaaa atgtatcgct
     9781 cttagtacgg ataaggcttg taatcctgta aatttatacg gtgcaaccaa acttgcaagc
     9841 gataagcttt ttgtcgctgc aaacaacata gcaggtaaca agcaaacacg ctttggtgtt
     9901 acaagatatg gcaatgttgt aggttcaaga ggttcagtgg tgcctttctt taaaaaactc
     9961 atcagcgaag gagctaaaga acttcctatc accgatacga gaatgactcg tttttggatc
    10021 agccttgaag atggagtaaa atttgtactg agtaattttg aaagaatgca tggaggagaa
    10081 atctttatcc ctaaaattcc ttcgatgaaa atcaccgatc tagcccatgc tctagctcct
    10141 aatttaagcc ataaaatcat aggcataaga gcaggagaaa aactacatga aatcatgatt
    10201 tcaagcgatg atagccattt aacctatgaa tttgaaaact actatgctat aagcccgagt
    10261 attaaatttg tagataaaga taatgacttt agtatcaatg ccctaggcga aaaagggcaa
    10321 aaggtaaaag atggtttttc ttatagctcg gataataatc ctttatgggc aagcgaaaaa
    10381 gaacttttag aaatcatcaa tcacaccgag ggtttttaaa atgcttactt attctcatca
    10441 aaacatcgat caaagcgata tagatacgct tacaaaagct ttaaaagatg aaattttaac
    10501 tggaggtaaa aaggtagatg aatttgaaga agccctttgc gaatatgtgg gcgtaaaaca
    10561 cgcttgtgta ttaaactcag ctacttcagc tcttcatctt gcctacacag cactaggtgt
    10621 ccaagaaaaa atcgttttaa ccactccttt aaccttcgct gctacggcta atgcagcctt
    10681 aatagctgga gctaaggtag agtttatcga cattaaaaac gatggcaata ttgacgaaaa
    10741 aaaactagaa gcaagacttt taaaagatag taaaaatata ggagctatta gcgtggtgga
    10801 ttttggggga aatagcgttg aaatagatga aatttcaagc cttgctaaaa aatacaatat
    10861 ccctttaatc gatgatgcaa gccatgcttt aggtgcctta tataaaagtg aaaaagtagg
    10921 aaaaaaagcc gatctttcta tcttttcttt tcatcctgtt aaacccatca ctacttttga
    10981 aggcggggct gtggtgagtg ataataaaga gcttatcacc aaaatcaagc ttttaagaag
    11041 ccatggtatc attaaaaaaa ggctttggga tagcgatatg atagaacttg gctataatta
    11101 ccgcttaagc gatgttgctt gtgctttagg gataaaccag cttaaaaaac tcgatcacaa
    11161 tcttgaaaaa agagaagaaa ttgcaagttt ttacgataaa gaatttgaaa aaaatcctta
    11221 tttttccacg ataaaaatca aaaattataa aaaaagctca agacatttat accctatctt
    11281 gctttttcct gaattttatt gtcaaaaaga agaacttttt gaaagcttgc ttcatgcagg
    11341 agttggtgta caggtgcatt acaaacctac ttatgagttt agtttttata aaaaactctt
    11401 aggagaaata aaactccgaa atgcggataa tttttacaaa gccgagctta gcataccttg
    11461 tcatcaagaa atgaatctaa aagatgcaaa atttgtaaaa gatactttat ttagcattct
    11521 tgaaaaagtt aaaaagggat attgtgaata agctagactt tagaagccaa gattttagcc
    11581 aaactggaaa ggctatgtaa taaactagct tgcgaacttt ttcctatccc tagaagcatc
    11641 acagggcaag gttttagaga tagcttagaa attttaaata aaactctggg cggggggggg
    11701 gatactcaaa tttcactcta taaaaagtgg cacaaaggtt tttgactgga tagtccctga
    11761 tgaatggaat gttaaagaag cctatatcat cacctcagaa ggagaaaaaa tttgtgattt
    11821 taaaaagcat aatttacacc ttctaaatta tagcgaagct atcgataaag aaatcgaact
    11881 tgaataactt caaaatcatc tttactccat agaagaaatg cccgatgcta ttccttatgt
    11941 aacgagttat tacaaaagac gttggggatt ttgtctcacg cataatgaaa gaaaaaaact
    12001 caaaaaaggc aaatacaaag tctatatcaa tgcgaaacat gatgaaaatg gggttttgga
    12061 ttatgctgat tttatcctac ctagtacgca aaattcaaaa gatgaaattt taatttcaac
    12121 ctatctttgt catccttcca tggcaaataa tgagcttagt ggtcctgtgg tggctatttt
    12181 cctagcaaaa tggcttttga gtttaaaaga aagaaggtat aattaccgct ttgtcatcat
    12241 tcctgaaacc ataggctcta tagtctatct tagcaaacat ttagagcatt taaaaaaaca
    12301 tgttaaagca ggctttgtgc tttcttgctt aggcgatgat catgcttact cactcataca
    12361 cacacccaaa aaaacactct aagtgataaa gttgccttgc atacgcttaa aaataaaaaa
    12421 aatttcaaag cttttagttt tttagatcgt ggaagcgatg aaagacaata caatgctccg
    12481 cttgtaaatc ttggcattgt aggagtatgt cgcacaagat acctagaata cgaacaatac
    12541 cacaccagca aagatgatct caattttatc tctgaaaaag gtttaatggg tggacttcaa
    12601 agcatacaag aaatgatttt aaatctagaa atcaacgctg tatatgaaaa caccatagta
    12661 tgcgaaccca atcttggcaa aagaggacta tatcataccc ttagcactgc caatgacatt
    12721 cctttagctt gtaattttct agcttactgt gatggagaga atgatatcat cgatatagcc
    12781 aatatcttaa atatgcaagc ttatgaattt aaagaacttt tgaaaaaaat aaaattttat
    12841 ggactagtaa aatgaaatat tttttagaac acaatgacaa aaaatactcc gataaggatt
    12901 taatagatgc tttttatcaa ctaggtataa aaagaggcga tattttatgt gtacatacag
    12961 aactttttaa atttggcata cctttgcttt ctagaaatga atttttacag actatactca
    13021 attgtttttt tgaagttata ggtcaggaag gcactttgat catgccaacc tttacttata
    13081 gtttttgcaa aaatgaagtt tatgacaaaa taaattccaa aacaaaaatg ggagcattaa
    13141 ataaatattt tcgcaaacaa acaggagtaa aacgcacaaa cgatcctata ttttcttttg
    13201 ctataaaagg agcaaaagaa gaattatttt taaaagatac aacaagttgt tttggggaaa
    13261 attgtgttta tgaagtttta gccaaagaga atggaaaata tataattttt ggtttaaatg
    13321 aagggcacgc tctagttcat tacgcagaag aaaaaaatac aactttttgt agatatttta
    13381 aaaattttaa aggtatttta ataaacgaaa aaaggaaaga aaaaacaata actattgact
    13441 actacgttag agatttgcaa cagtcttatt tatgcgatat taataaaatt aatcctataa
    13501 ttcaagaaac gcaaaattat aaaaaaataa attttgctaa aaattttata gaaatttata
    13561 atactagaga atatgttcaa gcaatatgtc aagccttaac caatgataaa ttagccatat
    13621 ataagaaaga tcgataatga aacaatttta tgaaatttta gaaaatatac ttgaaaccaa
    13681 agtagatgaa aatacaaatt taagcatgga aaactgcaag aactggactt ctttagctca
    13741 tattgatatc atcatgagtt tagaagaaga atttgaaatc aaatttagca aagatgaatt
    13801 aagtcagcta aaatctcaaa atgaactttt aaaagctatt aaggagaaat tatgttaaaa
    13861 aaactaaaaa actatttaaa ctcatagaag aaaaaaatgc tttgcataaa aaatgtttag
    13921 atggattgca actttcagat gaagaatata atgatttaga aaaacttatc atctattata
    13981 aagatacatt aaacatcaat ctagaagaac aagctaaaag ttatatagtt gtactcaatg
    14041 acactctaga agaaactaaa tattttatag aatttggaaa atatagatat agcactttag
    14101 cagaagtaaa aaatatggta tatttcaatg aaaattatat gaagcaatac atggtgggac
    14161 ttgctatatc ttcttttatt tggaatgctc atattgaagt tagaagatat tttgctaaat
    14221 atatagataa aaaacaagat cgaaaaagca cttatcttga aatcggtcct ggtcatggag
    14281 aattttttgt taaagcacta agaagtcaaa aaatttatag aatattatgg aatagatatt
    14341 tctcctataa gttgtcaaat gagcaaagat atggtagaaa atcaatttgg agcaattaat
    14401 caaaataatt ttaaatgtga ttttatatgt aaagatttca ctaaatgcaa tttcaacaat
    14461 aaagcagatt tagttgtaat gggagaagtc ttggagcacg tagaacaacc tttacagttt
    14521 atgaaagatg taaaaacttt actgaatgat ggtggagaaa tttttgcaac catccctatc
    14581 aacgctcctg ctattgacca tatttattta ttttcccatc ctgatgaagt taaagatttg
    14641 cttaaaaatg caggtttaaa aatcaaagaa tgcgaatatt ttatggcaaa taattattct
    14701 ttagaaaaag cattaaaaac aaaaaatgcc attgttatgg cagtggtttt ggaaaaataa
    14761 tgaatctttt ttcacctcat ttaaaacgca atgagcttat aaaatttgcc aaagaattag
    14821 actttagtaa aagtcaagat cttcttatta atatccatag aaatcatact tttgaaggag
    14881 tgcaaagcat cattgctcct tttttacatt ttgctaattt aagagctgag tttaatttca
    14941 gctcttatga tgatagcttg agttttgata actttaaata agctagttta gaacttttat
    15001 ggctagattt aacccgctat aaaaataatg tgcaaaattt tatagaagaa agacttttag
    15061 aactaagaaa aatttcacaa aaccctattt tagttcttag tttaggagaa tttaaaacag
    15121 ataaaaaaat tttaaattgt gaaattttta acatagaaaa actcataaaa gagtattttg
    15181 atgaagaaga tattttagac ttagctaaag aagaacttac aggctctaag cttaataata
    15241 aagccttgat tttcttggca caaattttag gacttagtct catccctgca cttgtaaaac
    15301 ccgctcttaa agctcttgta cttgatcttg ataatacctt gtatcaagga attttaggtg
    15361 aagagggtat agataatctt aatttaagtc ctttgcacaa aaccttacaa gaaaaaatta
    15421 aaacttttaa aaaacaaggg tttttacttg ccctagcttc aaaaaatgaa gaaaaagacg
    15481 caaaaaaact ttttgaaata aggaaagatt tcatcttaca atgggatgat tttgatgcta
    15541 gaatgatcaa ttgggagcca aaaggtgaaa atatcttaaa aattgctaaa aaatttaata
    15601 taaatactaa cgctatgctt tttatagatg ataatatcgc cgagcttgaa aataccaaaa
    15661 ttacaggcgt taaaacactt ttatgcgatg aaaatatact ttataaaatc aaactttttc
    15721 ctaatctttt aaaactttca aattaccaaa gaagatcaaa ttcgtgccaa agatatagca
    15781 gccaatgctt taagagaaga gcttaaaagc ttaagcgatg aagaatattt tcaaaatctt
    15841 gaaatcagct taaattttag caaaaatgat ctgcaaaata tccctcgcat tagcgaactt
    15901 ttaggcaaaa ccaatcaatt tatcgctaat tacacacgct taaatcaaga aaaagtcgca
    15961 caacacatgc aaaaagaact cattgtaagt gtgagcatga gtgataaatt aagcgatagt
    16021 gggattatcg ctatttttgt tttttcttgc aaagaaggaa atttatttat cgatgatctt
    16081 tgcatttctt gtagggcttt aggtagaaaa cttgaaacta gaatgttttt taaagccttt
    16141 gaactagctt tacatttctt tgatcttaaa aacaataatg caaggcttta ctatcaaaaa
    16201 ggcgaaagaa atatgccatt tttaagcttt ttagaacaaa tttctaaaga aattgaaaaa
    16261 aactcagccc ttgtttcatt tcaaaattta aactttaaag gacttataat ccatgaaaac
    16321 tagatttgat aaagccaaaa tttcaggcat ttgcgtaagc gtacctgaac ataaaatttg
    16381 cattgatgat gagttagaaa gcgttttttc aaatgatatt aaaaccctta aaagaatgaa
    16441 aaaagtcata ggcttaaaca cgcgttatat ttgtgatgaa aacacttgtg taagcgatct
    16501 tggcaaacac gcagccaata cacttttaca aggtttaaat atagataaaa atagccttga
    16561 cgcactcatt gtagtaactc aaagtcctaa ttttttcatg ccttctacgg cttgttattt
    16621 acaccaactt ttaaatttaa gccctaaaac catagctttt gatttaggac aagcttgtgc
    16681 agggtattta tacggcttat ttgtcgctca ttctttaata caaagtggct taggtaaaat
    16741 tttgctcgtt tgtggggata ctttaagcaa attcatccat cctaaaaata tgaatttagc
    16801 tccaattttt ggcgatggag taagtgcaac tttgattgaa aaaacggatt ttaatgaaac
    16861 cttttttgaa cttggaagcg atggaagaca ttttgataaa ctcatcattc caaaaggtgc
    16921 gatgagaata cctaaagcag atatttttaa cgatgattcg ctcatgcaaa ctgaggagtt
    16981 tagacaatta gaaaatcttt atatggacgg agcaaatatt tttaatatgg ctttagaatg
    17041 cgaacctaaa agctttaaag aaattttaga attttctaaa gtagatgaaa aagacattgc
    17101 ttttcatctt tttcatcaat ctaatgcgta tttggttgat tgtattaaag aagagttaaa
    17161 acttaatgat gataaagttc ctaatttcat catggaaaaa tacgctaatt taagcgcttg
    17221 ttcactacct gccctacttt gtgaactaga tactccaaaa gaatttaaag cgagtttgag
    17281 tgcttttggt acagggctta gctggggaag tgccgtgcta aatttcaagg atttatacac
    17341 aaaagatatt ttaatttaca caaaggagaa ataatgacaa aaactgaatt tttagaagag
    17401 cttaaagaag ctatgcatag agatgaagac ttaaatgaag atatgctact tgatgatata
    17461 gacgagtggg atagtttggc ttttgtatct gtgatggtgc tttataaaaa tctttttgct
    17521 ttaaaaatca cagccgagga cttgaaaaat tgtcaaaaag taagtgattt aatcaattta
    17581 gcaaagcttg attaaaacct ttaaggtttt aatcttttat cgttaattca aatttatctc
    17641 ccacatcttt aaacataaac actttatttc cacaaggata agagatggaa ttttcttgca
    17701 tgaaagattt tcttttttgc aatttttcaa gcattaaagg aagttctttt ctaaataagg
    17761 ctttatcagg tataccacaa ccatgatcta aatttttaat aaattttcca tcaattttat
    17821 tttcatctat caaatttaag cttacatcgt aacctaaaat ttttaatatt tgcatggttt
    17881 gttgtttaaa attggcaggc gttagaggat ctttatcgct atgataactc acataaataa
    17941 tatttttatt tttttgactt tgtaaaatta aatgatcttt atttaacaat gttctaataa
    18001 aataattttc attattaaaa aaataaggtg aattttcttt acgcgtccag tgggttttta
    18061 gaaaacaact cacaaaaaaa tgatcgccct gcatatacat atccccatta gtatctttgc
    18121 ttttaaattc caactctcta ccaataatat aattaagcgg tggaacagcc gaacccgaat
    18181 tatcaatcac accatccaca taccaaggag ctatctttgc tatgagcaag gctaagtatc
    18241 ctccataaga ccccccccca taaatttttg gtaaatctgc aagttttgga aagcgtttaa
    18301 ctagatcttt taaagcattg atatgatcaa tagctgccat aatgccaaaa ttttgatatt
    18361 ctccacgcga aggaataaaa gttgcactta gtctttcttc aaaatcataa ggcaatcgat
    18421 ttaacatttt tattctgtca taatctcgct caaatattca caatgactaa ctacagtatt
    18481 attggctaat tgatcacatg gaatattgta tttacgaagc actttttcta ttaattttaa
    18541 atcatctttt gtaaaatctg ctaatgttga atacttttca acatccgaac gcctttgaca
    18601 aaaacaatga taaaaaacat gcactgctac aacatcaaaa tttttagcaa tataatttct
    18661 ataagagtct aaaaaatata tatttgcatt ggctccataa cctcctatta taaaaactat
    18721 agctttaatc tctttttcat catcataact tatacggtat tcaagtttgc tagttctttt
    18781 tatatttaat tctacatcat cacaagaatc aatttcaaag ctttggttta tgagtatata
    18841 aaggcctttt ttattaattt atcgatatta tattacaaaa aattaaaaag gtaaatcatg
    18901 acaactcata tctatgattt tttagaaaaa agtttaatca aatttagcga aaaaactgct
    18961 tttgtagaac cctttgccaa aaaaagaaag gaaatcactt acaaagactt tgatctcttt
    19021 tctaaaaaac tagccagtga aattttaaaa actttaggaa atgataatcc tactcaagct
    19081 cctgttttaa tcatcttgcc taaagggatt gattgtttga tttcattttt tggagtagca
    19141 ctcagtggaa atttttatac acttttagat gaaaaaagtc ctaaagaaag agtagaaaaa
    19201 gttatagaag ttttaaaacc taaacttttt atcacttcaa aggatttaaa ttttaattta
    19261 gatttgccta cgctttatac acaagacttt gaaagtttta atatagatga gagtttgcta
    19321 aaaaatgcta aagaaaaaca tatagatact aatttactct atgttttctt tacaagtggg
    19381 agcacaggca ttcctaaagg agtaagcata gcacataaga gtgtgattga ttatactttt
    19441 tgggtgtgtg agacttttaa atttgatgag aatgaaattt tagccaatca agcaccattt
    19501 tattttgaca atagcatttt agatattttt tcaagtgtaa aatcaggagc aactttacac
    19561 cttttaccta atcatctttt tgcctttcca aataaaattt tagaatgtct tgaaaaagaa
    19621 aaagtaagca ctatattttg ggtaccttcg gtgctgattt attttgcaaa tactgaagct
    19681 ttgaataatt ttagtttaaa cgtcttaaaa aagatacttt tttgtggtga aatcatgccc
    19741 aataaacagc taaatatttg gcgtaaacac ttacccaatg ctttatttgc caacctttat
    19801 ggtccaacag aaatcactga tgtatgttct ttttatatca tcaatcgtac ttttaaagat
    19861 gaagaacttt tacctatagg caaagcatgt aaaaacacag aacttttagt ttttgatgaa
    19921 aatatgaatt tcataagtcc taaacaaata ggtgttaaag gggagctttt tgtgcgtgga
    19981 acttctttgt ctttagggta ttataatgac aaagaaaaaa gcaaacaagc ttttattcaa
    20041 aatcctttac atgataatta tttagattta ctctataaaa caggagatat cgtttcttat
    20101 aatgaatttg gagagctttt atgctacgga agagcagata atcagataaa atatatggga
    20161 cacagaatag aacttggaga aatagaaagc gtgataaatt cccatgcgaa tattaaaaat
    20221 agtgcttgta tttttaaaga agatattatt tgtttttatg aaagtgaaga agagattgat
    20281 cttaaagctt ttttaaaaga taaattacct tcttatatga tcccaaaaaa ttttattaaa
    20341 ctcgacaaat ttaagcttaa tcaaaatggt aaaattgata gaaaggtttt aaaagaactt
    20401 gtttaaaaaa gctttttata aaggatttaa gttaagtaat tactatgaca attt
//
LOCUS       DARATF010000022        20057 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.022, whole genome shotgun sequence.
ACCESSION   DARATF010000022 DARATF010000000
VERSION     DARATF010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20057
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.022"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            160..462
                     /locus_tag="SB502_000616"
     CDS             160..462
                     /locus_tag="SB502_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEG0434084.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            complement(485..691)
                     /gene="ccoS"
                     /locus_tag="SB502_000617"
     CDS             complement(485..691)
                     /gene="ccoS"
                     /locus_tag="SB502_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEG0434085.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIELERRKKEALDKKRLS"
     gene            complement(688..3045)
                     /locus_tag="SB502_000618"
     CDS             complement(688..3045)
                     /locus_tag="SB502_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HEG0434086.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKFFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFNGKEFAPKEVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGENTPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLLAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKALDLNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQAKGLS
                     AELNEGLLLGGSSKFLQEKGIVAKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIA
                     YLKKEKKELMILSGDHQKAVEKIAKKLEIQNYQASCFPEDKMKTIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            3154..4452
                     /gene="rho"
                     /locus_tag="SB502_000619"
     CDS             3154..4452
                     /gene="rho"
                     /locus_tag="SB502_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEG0434087.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            4456..5985
                     /locus_tag="SB502_000620"
     CDS             4456..5985
                     /locus_tag="SB502_000620"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEG0434088.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKTTDMLGFLDPEKIKAFYQAILTKDKEKVFAYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSTLIYERFFRILSKAKNMLCDDDGFTICVMAFMMMEA
                     SHLKEIDAQIQEIKQENTTNITPRITPSPIIPNLEKKIEKNAYEILLDSIYDRDFDLA
                     ECFKQSTKFISFENNTLNISSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKVL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGEPSIE
                     N"
     gene            complement(5982..6206)
                     /locus_tag="SB502_000621"
     CDS             complement(5982..6206)
                     /locus_tag="SB502_000621"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HEG0434089.1"
                     /translation="MFKARNLDAQSFHNAKIFWDYFFNLCILWFFAFQVVVAEWFGMW
                     MSKVWKGLPDTTRLVTYMFLALIFISLKND"
     gene            complement(6321..6500)
                     /locus_tag="SB502_000622"
     CDS             complement(6321..6500)
                     /locus_tag="SB502_000622"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HEG0434090.1"
                     /translation="MQQKCFCISKMIRFSKIIILLTVVSLAGIVVFGNVTDYNSNFQF
                     VSHVMSMDIKPDLFR"
     gene            complement(6572..8671)
                     /gene="copA"
                     /locus_tag="SB502_000623"
     CDS             complement(6572..8671)
                     /gene="copA"
                     /locus_tag="SB502_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HEG0434091.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQEKRKDIIAKIQNLGFEILEDEQSLNAYKAKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGLKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGALRIKANKKAMDSTLEQIKNLVFEAGSIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWVLKADLNTAFLHSCAVLLISCPCALGLATPIALVVASANAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKEKLSVFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDQICDLKGEGRVIVGSGIKYKEDNDNYLVGSAQFLHENEIDTKESDIFFDSFKEYVR
                     VYFAKNKKCLGGVLLSNALKDGAKELVLNLKEQNLKTFILSGDHVKNVEKIAKELQID
                     EFHAQLKSEEKLQIIQKFKKTLFVGDGINDAAALSAASVSMSFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRGIIKLNLFWAFIYNVLCIPIAAGFIPFISLSPHIAALAM
                     CFSSITVVLNSLRLKRI"
     gene            complement(8671..8865)
                     /locus_tag="SB502_000624"
     CDS             complement(8671..8865)
                     /locus_tag="SB502_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HEG0434092.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIVERL"
     gene            complement(8855..9805)
                     /gene="czcD"
                     /locus_tag="SB502_000625"
     CDS             complement(8855..9805)
                     /gene="czcD"
                     /locus_tag="SB502_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HEG0434093.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSMDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSGIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCNLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSKNEI"
     gene            complement(9880..10143)
                     /locus_tag="SB502_000626"
     CDS             complement(9880..10143)
                     /locus_tag="SB502_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEG0434094.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQAPRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            complement(10214..10708)
                     /locus_tag="SB502_000627"
     CDS             complement(10214..10708)
                     /locus_tag="SB502_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEG0434095.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(10705..11481)
                     /locus_tag="SB502_000628"
     CDS             complement(10705..11481)
                     /locus_tag="SB502_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HEG0434096.1"
                     /translation="MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
     gene            11548..12474
                     /locus_tag="SB502_000629"
     CDS             11548..12474
                     /locus_tag="SB502_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEG0434097.1"
                     /translation="MAKIGIVGLGYVGAASAYSIVTQGICSELYLYDIKQDLALAHAR
                     DLGDMSAIHFSYTKIFHVPNLENLASCDIIILAFRKESLKELPSRLVELQNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKFLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQRLGKDLDIQELEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDIAFSMPAIIGKDGIEK
                     VFELKFNEKEKIKLENSKQQIKNAIQSVKDKI"
     gene            complement(12471..13073)
                     /locus_tag="SB502_000630"
     CDS             complement(12471..13073)
                     /locus_tag="SB502_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0434098.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDITLCILSGTLGSALGALINYYICFFWGKNFVLKWGKYFGINEVKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLINFILFTALGSAIWVAILVFLGYY
                     IGQNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(13154..13381)
                     /locus_tag="SB502_000631"
     CDS             complement(13154..13381)
                     /locus_tag="SB502_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434099.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            complement(13392..14822)
                     /locus_tag="SB502_000632"
     CDS             complement(13392..14822)
                     /locus_tag="SB502_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HEG0434100.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQD
                     YSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPLDLDAGRNTRTSGP
                     VLYVDRAYLDYYITPEWIATIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGM
                     GDNLIIFNVAHMTDFALPLPGINLPIGPSGALVNVLQDGVYNLGNLTLANIHFENYNA
                     FGTNFNYFVSLGYSNGTNAHTLSAIPAVQSQLEFNEKDGYAVHVGGRYDFTKTLKVGY
                     EFFWGSRYWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGN
                     RGLPFGGAKKDKARADNIMLMYNVKF"
     gene            complement(14986..15468)
                     /locus_tag="SB502_000633"
     CDS             complement(14986..15468)
                     /locus_tag="SB502_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEG0434101.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGVGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            complement(15478..16185)
                     /locus_tag="SB502_000634"
     CDS             complement(15478..16185)
                     /locus_tag="SB502_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEG0434102.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFARKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIETKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            16294..16635
                     /locus_tag="SB502_000635"
     CDS             16294..16635
                     /locus_tag="SB502_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0434103.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIILSIVG
                     IIMINIGEVKE"
     gene            16635..16943
                     /locus_tag="SB502_000636"
     CDS             16635..16943
                     /locus_tag="SB502_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0434104.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKNKIWGLAAIVNAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(16961..18553)
                     /locus_tag="SB502_000637"
     CDS             complement(16961..18553)
                     /locus_tag="SB502_000637"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEG0434105.1"
                     /translation="MKSIIFNEIKKILECDFALENPKDKNLAHFATPLAFLLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALTNPNDFTKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLL
                     GLSILLSVKESILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDNYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSLK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEVKNKMEH"
     gene            complement(18565..18804)
                     /locus_tag="SB502_000638"
     CDS             complement(18565..18804)
                     /locus_tag="SB502_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEG0434106.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNADASIDETKKA"
     gene            complement(18806..19429)
                     /gene="gmk"
                     /locus_tag="SB502_000639"
     CDS             complement(18806..19429)
                     /gene="gmk"
                     /locus_tag="SB502_000639"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEG0434107.1"
                     /translation="MKLQGFVLLISGPSGAGKSTLLKKLFDEFKDELYFSISSTTRKP
                     REGEKNGVHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFD
                     IDVQGFKIARKKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKE
                     LSEYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            complement(19426..>20057)
                     /locus_tag="SB502_000640"
     CDS             complement(19426..>20057)
                     /locus_tag="SB502_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434108.1"
                     /translation="NKELQANISDFDDLPVVEEQEKEMDFDDLPEDAEFLGQAKDNEE
                     SEEVLEEFAPVVEEDVQDEMDDFTSNLSTQDQIKEELAQLDELDYGIDSDNSSKVLED
                     FKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEALGEEILEKNEEPIVSDVT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
BASE COUNT         7046 a         3640 c         2656 g         6715 t
ORIGIN      
        1 accgtctcta tctaaaaata atgcttttgt tttcataaaa aacattataa tatagctttt
       61 ttgaaaagaa aataaacatt atctttattt tcttaagatt tttataaaaa taaagatata
      121 taatatctgg caatctaatt tttactgagg agaaatcaaa tgaaaaaatt attagtagtt
      181 tctgctttgg catgtcttgg tgtttctgct tttgctgcag atggtgctac actttttaaa
      241 aaatgtgcag tatgccatgg tgcaaatgct gacaaagttt acttaaacaa agttccagct
      301 ttaaaaactc tttcttctgc tgaaagactt caatacatga aagaatattc agaaggtaaa
      361 agaaatgctt atggtcaagg tgcgatcatg aaacttaacc ttaaaggttt aactgaagaa
      421 gattttaaag ctatcgaagc tcatattgaa actttaaaat aatttctaaa aaaggctttc
      481 cttttcaaga aagccttttt ttatccaaag cttctttttt acgtctttct aattctatag
      541 catcacgcaa agaatcctca tcatcattta aagtagtaaa tttataatca tcatcaaatt
      601 gcttattttt aatcccccaa agcaaagttg ccaaaatgat aaaaaacgct aagatagaaa
      661 ctcctatcat catcatgatt atactattca ttctttaatc cttaaagcat ttaaaacgac
      721 tattatacta ctaaaagaca tagaaatagc agcaaataaa ggatttatca tacccaaaaa
      781 agccaaaggt atggtgcaag cattataaaa caaagaaaaa gcaagatttt gcttgataat
      841 tttaaaggtg tttttagata atttgatggc tttttttaaa gaaagcaagt catttttcaa
      901 aagcaaaaca tcactacttt ctatagctag atcacttcct tctcttaaag tcattgaaac
      961 acttgcgtat tttaaagcta gtgcatcatt taccccatca cctacaaata aaactttgta
     1021 atttttactt aaattttcta tagttttcat cttatcttca ggaaaacaag aagcttgata
     1081 attttgaatt tctaactttt tagcgatttt ttccactgct ttttgatgat cgccactgag
     1141 tatcattaat tctttctttt cttttttaag ataagcgata agctcttttg caccttctct
     1201 taaaacacta tcaaactcaa aaaaagctaa aattttacct tccttggcaa aaataaaatg
     1261 cgtattatca aattctttag ccacaatacc cttttcttgc aaaaatttag aacttccgcc
     1321 taaaagcaac ccttcattta actcagcact taaaccttta gcttgaatac tcgaatgctt
     1381 tttaaaatcc aaatttaaat ccttagctcc tttttgcttt aaatataaca caatattttg
     1441 agagatagga tgtttagaaa gttttacaaa attataaagc tcgtttaaat caagcgcttt
     1501 atctaaaaaa acctctttaa gttcaagctc tattttggtt aaaatacccg ttttatcaaa
     1561 taccacacaa tcacatttgc ttaaatcttc tatcacgcta gaacttttaa ataaaatatg
     1621 cttttttaaa gccctaccta aagccacaag attgctcact ggcgttgcta aagccaaagc
     1681 acaaggacaa gcgataatca aaactgcaat cgcattgact aaagaaattt cgaaactctc
     1741 ttctttataa aaaaaccaaa aagcaaaaca aataaaagcg atcaataaaa ccgttctaga
     1801 aaaataagcc aaaagactat taaccaaact ttcaagtttt gcttttttag aacttgcaag
     1861 ttctaaaagc tggataattt gactgagttt tgaatccttg taaagctttg ttgcttcata
     1921 ctccacactt ccatcaagca ctatacaagc tgaaaaaatt tcatcttctt tttgtatgag
     1981 ttttggggta ttttctccat ttaaagaaga agtatccaca ctcatttcac cacttttaca
     2041 aatcccatcg attaaaattt tatctccagt tttaagcaaa attctatccc ctaaacaaac
     2101 cttttgaact tctttaggag caaattcttt accattgaaa actaaaactt cattttgtaa
     2161 aaaatcatta agcccatcta tggtatctaa agcacgcttt ttgctaaaca tctcaagata
     2221 tttacctata aaaacaaagc aaattatcat cgccacagag tcaaaataca cttcccctac
     2281 cctaaaaaac atggcccata aagaataaac ataagccaaa ctcgctccgc taatcaccaa
     2341 tacatccata tttaaactat gcatttttaa agttttaaaa gcacttttat aaaaatgaga
     2401 tcccgtataa aaaagcacag gagaacaaag gataaattca gcaaaattta aaatatcctt
     2461 agtgtcctta tccataccgc taaaaaatcc tgcgtatttt gccactgcta tccacatgat
     2521 attcatcaca caagctatag ccacaacaag cttagaataa aattcccttt ttagtaaatc
     2581 cgcttttttt gaagccttgc tcgcatcata agcactcgct ttatagccta tgctttcaat
     2641 aagtcttaaa atttgcacca aagaaatact ttgctcatca aaaacaatgc gtgctttatg
     2701 gtttaaatga ttaatatcaa gttctaaaat tccttcttgt ttggttaaaa ttttctcatt
     2761 aagccacaca caagctgcac attctatacc gtgtatcatg agataaattt cactaaatcc
     2821 ttctttggtt ttagtgataa actcatcata atttttcatt tcattttgaa aatttacagg
     2881 gcttaaagtt tgatttccaa gcttttcata aaactcatct aatccacttt catgcaaaat
     2941 ttcccaaacg ctctcacaac ctttacaaca aaaaaattta cccttatact ctatcatttg
     3001 ggcttgttta taatcaagtt tgcaatgttc acatttcata atcattcttt aaaaaaatat
     3061 tttttataat tataaacaaa tttgacaaaa agtgcatttt tttattaaaa tcacatttta
     3121 caaaaattat tctgctaaat cttacgagga cttatggaaa aagaaaaaaa acaacatcaa
     3181 agaacccacg ttccagtgga aggttataaa atcgaagaat taaaattatt agatttagaa
     3241 aatctagtta aaatcgccaa tgaatgtgaa atcgaaaacc caagagaatt tcgccgccaa
     3301 gaacttattt ttgaaatttt aaaagcacaa acaaaaaaag gcggttttat actttttaca
     3361 gggattttag aaatttcttc cgaaggttat ggctttttaa gaggtatgga ctctaatctt
     3421 agcgatagtg ttaatgacgc ttatgtttca aattcacaaa ttaaaaaatt tgctctgcgt
     3481 gtaggcgata tcgttacagg acaagttaga gaaccaaaag atcaagaaaa atactacgct
     3541 cttttaaaaa tcgaagcgat caattatctg cctttacaag aagccaaaga aagacctttg
     3601 tttgataact taacccctat ttttccaaca gaaaaaatca aactcgaata cgatgcaatg
     3661 aagcttacag gtcgtgtttt ggatcttttt actcctatag gaaaaggaca acgcgggctt
     3721 atcgttgctc caccacgcac aggtaaaaca gagcttatga aagaacttgc tactgctatt
     3781 gcaaaaaacc acccagaaat gcatttaatc gtacttttag tcgatgaaag acctgaagaa
     3841 gttaccgata tgcaaagatg tgtaaaaggc gaagttttta gttctacttt tgatttacct
     3901 gcttataatc atgtgcgtgt agctgaactc gtgatagaaa aagccaaaag aatggtggaa
     3961 acaggcaaag atgttatcat cttgcttgat agtatcacaa gactggcacg tgcttataac
     4021 accgcaactc caagcagcgg aaaagtccta agcggcgggg tggatgctaa tgccctacac
     4081 aaaccaaaac gcttctttgg tgcagctaga aatatagaaa atggaggctc tttaactata
     4141 gttgctacag ctttaattga tacaggttca agaatggatg atgtgatttt tgaagaattt
     4201 aaaggcacag gaaatagcga aatagttctt gatagaaata tcgccgatag aagaatttat
     4261 cctgcgatta atatcatcaa atcaggaaca agaaaagaag aattactcca aggcgtagca
     4321 aatcttcaaa aaatttgggc gatccgttca gcgatttctc aaatggatga tgttgaagcg
     4381 ttgaaatttt tatattctaa aatgcttaaa accaaagaca atgtagaact tttatctata
     4441 atgaacgagt aaaaaatgct tcaagcttta gcgattaaat acagaccaaa aacttttgat
     4501 gaacttatag gacaaaagac agttagcgta agtttaaaat acgccctaaa tcataatcgc
     4561 ttagctcatg cttatctttt ttcaggactt agaggaagtg gaaaaacttc aagtgctaga
     4621 attttttctc gtgctttagt ttgcgaacaa ggaccaagtg atactccatg tggcacttgc
     4681 aaacactgtc ttgcagcact tgaaggcaaa catatagaca ttatagaaat ggatgctgca
     4741 agcaaccgtg ggcttgaaga tatacaagcc ttaatcgaac aaaccaaata caccccttct
     4801 atggcaagat ttaaaatttt catcattgat gaagtacata tgcttacccc acaggctgca
     4861 aatgcacttt taaaaacctt agaagaaccc ccaagttatg ttaaatttat acttgcaacc
     4921 acagatcctt taaaactccc agctaccgtg ctttcaagaa cgcaacattt tcgctttaaa
     4981 caaattcccc agagtgaaat tttaaatcat cttaaagaaa ttttacttaa agaaaatgtt
     5041 aaatttgaag aagaagcttt aaaatttata gcaagaagtg gcaacggatc tttaagagat
     5101 actttaacct tgcttgatca agccattatt ttttgtcaaa atgaaatcag cattagtaaa
     5161 actacagata tgctaggatt tttagatcct gaaaaaatca aagcctttta tcaggctatt
     5221 ttaacaaaag acaaagaaaa agtttttgca tacttagaag aactacaaga ctatgaagcc
     5281 tcaagcgtga tcgatgaaat gcttttttat ttaaaagaaa gtttttttgc aaaaagtaca
     5341 gaattttcta ctttaattta tgaaagattt ttccgtattt tatcaaaagc taaaaatatg
     5401 ctttgcgatg atgatggctt tacgatttgt gttatggctt ttatgatgat ggaagcaagc
     5461 catttaaaag aaattgatgc acaaatccaa gaaatcaaac aagaaaatac aacaaatatt
     5521 acacctagga tcacaccttc tcctatcata cctaatcttg agaaaaaaat agaaaaaaat
     5581 gcttatgaaa tcttgcttga tagtatttat gatagggatt ttgatcttgc agaatgcttt
     5641 aaacaaagca cgaaatttat tagttttgaa aacaatacct taaatataag ctcaaatgca
     5701 caaggacaaa atcgcgatac actcaataaa ggctttaaac tcatacaaga actttttaag
     5761 gctaaatttg gggaaaatgc taaaattaat gtgcaaaaag tactaacaat tgatgaaaat
     5821 aagcttcaat ccttaactca agaattacca aacaatgaaa ataaaaacat agatattcaa
     5881 agttctatta atatgcttaa agaaggggcc aaaaaatttg acccacaaga agatcttaaa
     5941 gaggctctta aagattgttt tggagagcct agtatagaaa attaatcatt tttaagagag
     6001 atgaaaatca aagccaaaaa catataagtt accaatcttg tagtatcagg taaacctttc
     6061 caaaccttac tcatccacat tccaaaccat tctgcaacaa ctacttggaa ggcaaaaaac
     6121 cataaaatac acaagttaaa gaaataatcc caaaaaatct tagcattatg aaagctttga
     6181 gcatctaaat ttctagcttt aaacatatca taagcacctt ttttagagct gttaaggcaa
     6241 taaaagtttc aaaaagaata attgctatat agcctatatg ataaatcacg ggagaagtaa
     6301 tagccatata aactacagca ttacctaaat aaatcaggct ttatatccat actcatcaca
     6361 tgcgaaacaa attggaaatt agaattgtaa tctgtcacat ttccaaaaac cactatacct
     6421 gctaacgata caacggtaag caaaataata atttttgaaa atctaatcat tttgcttatg
     6481 caaaaacatt tttgttgcat ttatactctt ttaataatat attttagtaa tattaattat
     6541 atataatata ttattaataa aaatcaaatt tttaaattct tttaagtctt aaagaattaa
     6601 gcactacagt aatagaacta aaacacattg caagtgctgc tatatgagga cttaaagaga
     6661 taaaaggtat aaatcctgcc gcgataggaa tgcaaagcac attataaata aaagcccaaa
     6721 aaagatttag cttaataata ccgcgtgttt ttttagcaag tttaaaacat ttaaaaatcg
     6781 ctgataaatc atcttttatc aagataaaat ctcctgtttt tttagcaagt tcatttgcct
     6841 ttgaaaaact catactcaca cttgcagcag ataaagccgc cgcatcattg atcccatctc
     6901 ctacaaaaag agttttttta aatttttgaa tgatttgtag tttttcttca ctcttaagct
     6961 gagcgtgaaa ttcgtctatt tgtaattctt tggctatttt ttctacattt tttacatgat
     7021 cgccgcttaa aataaaagtt ttaagatttt gctctttcaa atttaacaca agctctttgg
     7081 ctccatcttt taaagcattg cttaataaaa caccgcctaa acacttttta ttcttagcaa
     7141 aatacactct aacatattct ttaaaagagt caaaaaagat atcactttct tttgtatcaa
     7201 tttcattttc gtgcaaaaac tgcgcactgc ctacgagata attatcatta tcttctttgt
     7261 attttatgcc agaacccaca atcactcttc cctcaccctt taaatcacaa atttgatctt
     7321 tatgtaaagc cttggctata ggatgagagc ttaaactttc aatttgacat aatttatcaa
     7381 aatcatcttt agaaagattg tgtttaaaaa cactcaattt ttcctttgtt aatgtacccg
     7441 ttttatcaaa aaaagcatac ttaactaagg ctaatttttc taaagcagca ggatttttaa
     7501 taagaatgaa attttttgcc gcatttgcac ttgccacaac caaagctata ggcgttgcaa
     7561 gacctaaagc acaaggacaa gagatcaaaa gcacagcaca agagtgtaaa aaagctgtat
     7621 ttaaatctgc ttttagcacc caaaaaacaa aaactaaaaa agcaaaaaat attatacccc
     7681 ctacaaagta tttagaaatt tgatctgcta aatttgccaa aggacttttg atacttcctg
     7741 cttcaaaaac tagatttttg atttgttcta aagtactatc catggccttt ttgtttgctt
     7801 tgatccttaa agcaccattt aaaactactg ctcctgcttg aacttcatcg ccttcttttt
     7861 ttaaaacagg caaaaactcc ccatttaaaa aactcatatc aagctctgca ctccctaaaa
     7921 gcactactcc atctgcaaca atactttctc cttcttttac caaaagtaca tcgccacttt
     7981 tgacaaaaga acttgaaatt tctttgatac tttcatcttc aagcaaaatt tttgtctttt
     8041 ttgtgtctat attttctaaa attctttgat aatcttgtgc cttaaattta gccttacttt
     8101 caagatattt tcctaaaagc acaaaggaaa taatcatcat tgcaccacta aaatacaaat
     8161 cttcttcttt gaaaatttgc aaatacacca aaaaagaata cacaaaagca ctcaaagtcc
     8221 ccaaagctac aagggtattc atatctaaat ttttactttt aagtcctaaa aaagcatgag
     8281 aaaaaaagtc tctcccacaa taaaatatcc caaaaaaact caaagccatt tggatatttt
     8341 gagaaaaaga acttttaaca aacatttcaa aatacataat aatcacactc aaaactatac
     8401 ttaagagcaa attttttctt aattctaagt gtttttttgc cttgtatgcg ttcaagcttt
     8461 gttcatcttc taaaatttca aagcctaaat tttgaatttt tgcgatgata tccttgcgtt
     8521 tttcttgatc ttcaagtaaa aaaaccccgc tagaattcac ataagaaaca ctagcatctt
     8581 taacaccatc aattttttta caagctcttt ctatagcgtt agaacaatta acgcaagtca
     8641 ttttgcctat ttttatacgc aattcttcca ttataaacgc tctacgatct caaaacctaa
     8701 atcttgaaat tcttttgtaa aatttgatac ttgattttct tctaaattta aacttaaaat
     8761 tttttgctcc aaatccactt ctatatttcc aaattcatct tcaagagaat ttttgatcaa
     8821 atttacacaa ttcatgcaat taacattttt tactttaaat ttcattttta ctccttatag
     8881 gttgtatggt aatgtgcccg atttcaaatt catgcaataa cttatgagat aaatcctgag
     8941 atagtttttc aaattccttt agattgcaaa ctcttacttt taaatgcata gaggctacta
     9001 gcattttatt agtgatttga gtaatatgca aatccactac ctcatccaca ctaggattta
     9061 aaagcaaaac ttgtcttact ttttctatat ccacaggaga actttcaagc aagacattag
     9121 cgctttgttt aagcaagata atcgcccatc ttaaaagcaa gattgataat acaatagcta
     9181 aaatcgtatc tatataaaca ataccgctaa aatacaccac gatcccacct ataataaccg
     9241 ctaaagaacc caataaatcg ctcatcatat gcaaaaaagc ggacttcata ttgacatttt
     9301 ctaaatttgc acccttaaac atcatcaaag cattaatccc atttaccaaa aagcccaaaa
     9361 tagctacaat tatcatggtt ttagcgtcaa tttcttttgg attgataaat ttttctatag
     9421 cctcataaat gataaataaa gccgataaaa taatggttaa agcattgata aaagccacta
     9481 aaacttcaag acgaaaatac ccaaaggtct tttgatgatc ttgccatttt tctacagcta
     9541 taatggctaa aaaactaaga gctaaggcaa aaacatcaga aaacatatgc aaagtatcgc
     9601 ttaaaagtgc caaagaattt gaaaggattg aataaataaa ttgcacaagc atcatagaaa
     9661 aagtcattaa aagagaaatt tttaaaatct ttttatccat actccttgca tcagcatggg
     9721 aatgatgatg ttcatgagaa tgttcttcgt gattatgatg acaagatttg ttagctaaag
     9781 gctcgtgtga taaaaattta tacatcttat atcctttttg cttgacattt taagatatta
     9841 agctaaaaag gatataaata tttgttattt ttataaaaat taaaagtcaa aaagctcgcc
     9901 tagccaactt tctttctttt tctttttata gtaatcattg tgctgatgat aagctgagtc
     9961 attatatctt gactcttgtc ttggagcttg gttaaaattt gctgtattag ggacactgcg
    10021 ttctatgatt ttgtcaagtt ctccacgatc aagccaaacg ccacgacact ttggacaata
    10081 atcaatctca actccactcc tatcactcat aaccaaatct acattacaaa ctggacataa
    10141 catacaatac ctttttttta aatttttgat ttaaaattat aaaaagaaat attaaacaaa
    10201 tttacaacaa gttttaatgt ttttttgcat gtctagtcat cataaaactt tgttcaaaaa
    10261 atataagcaa ggtaacactc actcctatag ctagagccaa agtcacagaa acagttgtaa
    10321 aaaaataatc aaaaaattga accaaaaatt cagacttagc cttcaaatca tcactgcgta
    10381 taaaagaaat aagatacaaa atcgctttat aagcataaat tccaggtatc ataggaataa
    10441 gagcagggaa agcgataatt tcagcaggag ttttgatgat ttttgctaaa acaattccta
    10501 aacatcctat gcaaaatgaa gcaacaaaag ttgcaattgc taaagtttga aaatgaaaat
    10561 attccaccaa ggtaaaacga agcccatgtg caattgccgc taaaagagca gataaaataa
    10621 gggtttttaa aggtggatta caagcataag caaacccaaa tcccgccaca gcagcaaaaa
    10681 acatatctct taaaataaat tcaatcatct taaaatccca aaatccgaaa tactaagcgt
    10741 catgtaaatt ccaagtgcta tacaacaaat caaaatagcc acgctgataa tacggctaag
    10801 ccccattaaa atatgatctt ttaatatatc aatcacagaa tttataaaaa atactcctgg
    10861 tataagatac aagatactag aacccaaagc cacatcagaa gtattggtat atcccatatc
    10921 cagtccaaaa aatacaaacc acgatgagat aaaagaacaa aggatgtatt gaattcttaa
    10981 atcaatcttt gctttagtta aaatatatct taacaacaat cccacaaaag ttgcaaaaaa
    11041 tactaaattt ccagcaccaa aatcaccacc aaaaagccta caaaaagctg aatttgccat
    11101 agaaacaaat aaaagattaa gcaaataaga atgctttttt tgttgagaaa tttgctcaaa
    11161 aacgactttt gctttttcaa gatcgtattt gtgatcatat atagcccagc ttaaagcact
    11221 taaatcaaaa ataagcttaa aattaacatg ggcatgatga ttgggtataa cataagttct
    11281 ttgaatggag ttatcatcca tatctacaac atttaaagta atatgatgaa aaaagaaatt
    11341 gatatttatc tcatagccat aaacctcagc tattcttcct acgcattttg ccaccctagc
    11401 tgtataagtt ccagcaccta gcaaagtttt agtatatacg attaaaaaat tagttaatct
    11461 ttgtatatca ggtttttcca tattttaata atctttgatt gaatttgtta taattatagc
    11521 aaattttaaa ataaataagg agaaaaaatg gcaaaaatcg gtatagttgg tttaggttat
    11581 gtaggagctg ctagtgctta tagcatagtt actcaaggaa tttgttcaga actttactta
    11641 tatgatataa aacaagattt agctctagct catgcaagag atttgggaga tatgtcagcc
    11701 attcattttt cttatacaaa aatttttcat gtgccaaatt tagaaaattt agcttcttgc
    11761 gatattatca ttttagcttt tagaaaagaa agcttaaaag aattacctag tcgcttggta
    11821 gaacttcaaa acaatatcct cgaacttaaa gacattgtct taaccttaaa aaatgctaat
    11881 tttaaaggca aatacatcgt cgcaacaaat ccaaatgaca ccataactta ctacactcaa
    11941 gtattaagcc aattacctaa aaatcatgtt tttggtagtg gaacaaattt agatagttca
    12001 agacttaaga aatttttagc caaagattta aacataaatt caaaagatat ttttgcttgt
    12061 atgattggcg aacatggaga ttctcagttt gcagcacttt ctaatgcaag cgttttagga
    12121 caaaatttat tagattttta caagcaaaga ttaggcaaag atttagacat acaagaactc
    12181 gaaaaagccg tgattagtga gggatatttc atctatgaac gcaaaggaag aacagaattt
    12241 ggcataggaa cttcttgtgc aaatttagcc aaagccatcc tagaagatag aaaaagttta
    12301 catcctgtaa gtgtggtttt tgatgatata gctttttcaa tgcccgctat cataggaaaa
    12361 gatggtatag aaaaggtttt tgaattaaaa ttcaatgaaa aagaaaaaat aaaattagaa
    12421 aattcaaaac aacaaatcaa aaacgccata caaagcgtaa aagataaaat ttaagccttt
    12481 ttaaaaggct ttttgatttt aatataaatt aaacttgcta aaatcacaaa aacaattata
    12541 ataattaaaa tttgagttaa ataagtttta atcaactctt cattttgtcc tatataataa
    12601 cccaaaaata caagtatagc cacccaaata gcgctaccaa gtgcagtaaa aagtataaaa
    12661 tttataagtt tcatttttac caaacctgca ggcatagaaa tatactgacg aatccctggc
    12721 aaaagacgac aagtaaaggt tgaaaattcc ccatgtttgt taaaaaattc ttcaaattta
    12781 gcaaatttga cttcgtttat accaaaatac ttaccccatt ttaatacaaa atttttaccc
    12841 caaaaaaagc aaatataata attaatcaaa gcccctaaag cagaacctaa agtcccacta
    12901 agtatacaaa gagtgatatc aagttcgcct ttatgtgcca aatatccagc aggtatcata
    12961 acaacttcac ttggaaaagg tataaaacaa ctctctaagg tcattaagat aataataccc
    13021 aaataccccc aagcgctagc cgtctcaaca ataaaagaaa tgatttcttg catattagcc
    13081 ttatttgaag aaaattttaa aaaattgtag cttaaaagat taaacagtaa aaagcggttt
    13141 tataccgctt tttttattta cctgcaactg aaacttgatt tggattgtcc gctgcacgag
    13201 cgatcataca ctcttttaaa acagcagcat cagctggatc gctaactttt ttattaatcc
    13261 agcgttcaac ttgtttcatt gtttttgact ctggctctgg agcttcgtat tttgccatca
    13321 aacttgcaca atcagccaaa gcaatgatag gtaataaact tgcaaaaagt atttttctca
    13381 tcttttgctc cttagaattt tacattatac attaacatga tattatcagc tcttgcttta
    13441 tcttttttcg ctccaccaaa tggtaagcca cgattacccc aaatattttg gatattagta
    13501 taacttaagc gtaagaattg atatctatca agttgataaa tcacataaaa atcatgtgct
    13561 gttcctcttg tcattcttat attaagcgga tcgttgatac ttggacggct catagtatac
    13621 cagtatctac ttccccagaa gaactcatac cctactttta aagtcttggt aaaatcatag
    13681 cgtccaccta catgcacagc atagccatct ttttcattaa attccaattg agattgcaca
    13741 gcaggaattg cacttagagt atgtgcattt gttccgttag aataccctaa agatacaaaa
    13801 taattaaaat ttgtaccaaa agcattgtaa ttttcaaaat gaatatttgc taaagttaaa
    13861 tttcctagat tgtaaacacc atcttgtaaa acattaacca aagcaccgct tgggccaatt
    13921 ggaagattga ttcctggaag tggtaatgca aaatcagtca tatgagccac attgaagata
    13981 ataagattat cccccatacc ttctatagga agctctcctt ctactgcagc atagtaaaga
    14041 tttgcatcag catctttttg atcgctcatc cagtctctta ccttaccctc ttcatcccat
    14101 tgataagttt taccataagc tgcacggatg gctaccttat gatcttgcaa actttcaggt
    14161 ttataagtga ttactgctgc atcacctaga gcattaatcg ctaaggctgg ataagtggat
    14221 tgtcttaaag cattgtttct aagattactt cctgggccat cggttcctgg ctgtcttcct
    14281 atggttgcaa tccactcagg tgtgatatag tagtcaagat aagctctatc tacataaagt
    14341 acaggcccac ttgttcttgt gtttcttcct gcatctaagt caagtggact tccactccaa
    14401 cccatttgag accaattttt agccatagat aaacgaccat agaatttggt tttatcatta
    14461 atatcagcat tcatatttaa atgaagctca ttcatccatt tgttattagc actataatct
    14521 tgtccgctaa ctttatagtt tgtatttgaa actgctgttg aaaactcaag tccaaattta
    14581 accttgctca aagcagcttg gaattctgtt tcatcggccc tatcattaag atcagcaagt
    14641 tcagctttta cagcttcatt ttgcttagct tgagcttccc tttcttttct gatttgtgca
    14701 agttcagctt gaatttgtgc aagctgtttt tgaagcttgg ttatctcatc atctgtattt
    14761 ttagcaaaaa gtgaagatga aagaagacaa gcacttaaaa taagtgaaaa cttagttttc
    14821 ataatcataa ctccttgtaa ttttgttaca tttagcaaat taaaattgtg attatagaaa
    14881 aaaaagttta aaaaaaaatt atacattaat catttttagc tagtcaaact tatgactagc
    14941 tttgtaaata ttgtagtttt aaaaaagttt taaaatttta aatttttaaa ttttatcgca
    15001 aatttttatg tctaaaattt tatctccttg gcgtatagag tctaaaactt ctaaactttc
    15061 ttcatctttt ggatcaattt gcccaaaaac agtatgaacc ccatctaaat gagcttgagg
    15121 gctgtgacaa atgaaaaatt gagaaccacc cgtatcgcgt cctgcgtgtg ccatagataa
    15181 ggttccacgc tcatgtttat gctcttgatc atcacattcg caaatgattt catatccagg
    15241 cccacctaca ccattgccgt gtggacaacc tccttgtatg acaaaatttg ggatcacacg
    15301 atgaaaattt aaatctttat aaaatccctc attagccaaa gtagcaaaat tacaaaccgt
    15361 ttgcggagcc tcatcgccaa aaagttttaa tttcattgtg cctttttcag tttctataag
    15421 agcaaatttg tattcattta ctttgcttgt gtcgattgtt tttatcatta tttctcctta
    15481 atctatattt gtataaacag cttgaacatc atcatcatct tctaacttat ctaaaagttt
    15541 ttctatatcg ctaagctgtt cttcgctaaa gcttacagga ttgtttggta tatactcaag
    15601 tcctgctttt ttaagaacta aacccttagt ctctatagca gaacttagct caccaaaggc
    15661 agtataatca ccactaatta ctaactcttc ttcattttgt tctaattctt caagccctgc
    15721 atcgatcaaa tcaagttcta attcttctaa atctcctgca aatttttcaa gatgaaaaac
    15781 cgcttttcta gcaaacataa agcctaaaga tccattttgt aaaacttctc caccattttt
    15841 gctaaaaatg gctttaacat tagccacggt gcgcgtaggg ttatcgctca tacattcaac
    15901 tataaccaaa gctccatgtg cagcttttcc ttcataatga atgtttttaa tatctgcgct
    15961 atcttttcca ctcgcacgct taatagccgc atctatatta tcttttggca tattatttgc
    16021 ttttgctgtg gctatagcac ttcttaattt tggattcata tcaggatcag tgccaccttc
    16081 tttagcagct acttgtatgg ctttagcaag cttaggaaaa agcttactca ttttatccca
    16141 tctagcctct ttagaagctc ttcggtattc aaacgctcgt cccataaatt ctcactttct
    16201 ttaaagattt ttaaacttaa aagtataaac taaaaaggct aattaaagct ttaaatggta
    16261 tgattttacc atttattttt agggagaagc tttttgaata tcgcaaaaaa agaacttttt
    16321 gttgcttggt ttttcttgat tgctgctatt gtatttgaag ttttaggtac tagtttttta
    16381 aaaatggaaa atcaaatttt aggctatata tttatggctt tatttatagc tttttcttat
    16441 ttttttatgg gcaaggcgat taaaaaaatt caagtaggca tagcctatgc tgtatgggaa
    16501 cttttaggga ttattcttat acttttagtt tcttttatag tttttaaaga gagtttaacc
    16561 ttaactcaaa ttctaggcat tattctttct atcgttggaa ttatcatgat taatataggc
    16621 gaggttaaag aataatgtat atttttatta ttgttctatc ggcattgtta gatatcgtag
    16681 caaatttatt gctaaaaaaa tcagatggtt ttaagaataa aatttggggc ttagctgcga
    16741 ttgtcaatgc tatacttgct ttttttctac tttctttttc tttaaaatat gttcctttaa
    16801 gcatagctta ctcaacttgg ggtgctatag gcatcatagg aacttgtctt ggtggatgga
    16861 ttttatataa agaaaaatta aacaaaatag gaattttagg tatcattatc gtgataatag
    16921 cagtattttt gctaaattat taaaacagca aaatgctgtt ttaatgttcc attttgtttt
    16981 ttacttcaat acccattaaa gaaaatgcgg ttttaatact aagagcaacc aaagaaaata
    17041 atttaagcaa atcattttca tttgcagagc ctacaacttt attttcattg tagaatttat
    17101 gaaaatttgc agctaaattt ttaagataat caggaatttt ttgcaaagct ctagcctcaa
    17161 aagcatcgtt taaaacagcc tttaaattca aagcttcaaa aagcaaattt acgccatctt
    17221 gatttaaact ttgtaaatca gctttcatta catcatcgat ttttttacca gctttagcaa
    17281 acacttgatg aattctagcg tgtgcatagt tgatataata cacaggatta gaactatctt
    17341 ctttttgcaa atcactaata tcaaattcca aatgcgtatc gcattttttg ctcaaaaaga
    17401 tataacgcaa agcatcactt cctatctcat caaccacatc gctcatcaag ataaaatttc
    17461 ctgctctttt actcatttta taaggttctc catctttaag tagggaaacc atttgtgcta
    17521 aaataatctc aagattatta gagtcaaatc ccaaaaattc catcgcagct ttcattctag
    17581 ggatataacc atgatgatct gctccccaaa tattgataca tttatcatag cctctactca
    17641 ttttatcctt atgataaact atatccgctg ctaaataagt cccacggcca tcttcacgga
    17701 taataacacg atctttttca tctcctttta aagacgaagc aagccaaatt ttaccttctt
    17761 gctcgtaaat tcctttatgc tcttttaaag attctaaagt tgcatttaaa gcatcataat
    17821 acgatctttc gcttacatag ttgtcaattt taatctttgc ttgttctaaa ttttgtttaa
    17881 tcaaaacaag cattttatct tttgcccaat cagccaaact agggatattt tcttcgctaa
    17941 aaaattcttt accaaatttt tcaaaagctt cttttgctaa atccgctata tactcgcctt
    18001 tgtaatattg ctctggatat tcaacatttt catgaagtat actttctttc acacttagta
    18061 aaatagaaag ccctagtaaa taaatttgat tacccgcatc attgacatag tattctgtat
    18121 taaatttata gcccaaatgt cttgcaagtc ttgttaaggt gtctccaaaa acagcgcctc
    18181 ttgcatgtcc tatgtgtaaa ggcccagtag gatttgcact cacatattca agcaaaaaac
    18241 tttcttgttt tttttctcct ttagtaaaat catttggatt tgtcaaagcc tgatttgcaa
    18301 gttcatttaa aaaagttttg gaaattctaa aatttaaata cccatttaca gcttcaactg
    18361 attcaaaaca atcatgattt tgaaatttgc tcgctaagtc gctagcgatc aacatagggg
    18421 atttttttaa ttccttagcc agtaaaaaag ccaaaggggt agcaaaatgt gctaaatttt
    18481 tatcctttgg attttcaagc gcaaaatcac actctaaaat ctttttaatt tcattaaaaa
    18541 taatactttt caaaagacta aaccttaagc tttttttgtt tcgtctatac ttgcatcagc
    18601 atttgtatta ttagttgtgt ttttgttttc ttctattttt tgagtatttt ttgctacttc
    18661 atcatcatta ttcatttcat ctttaaaagt tttaatacct ttgcctaaac cctttgcaag
    18721 ttctggaatt ttttttgctc caaaaagcaa tacaacaatc aataaaataa tcaaccaatg
    18781 acttggactt gaccaaccac ccattttatt ctccttcatt ccaaatattt tgaatttgcc
    18841 ctagattctg ccctttggtt ctaaatttat gggcgattaa aatcgctcgc aatgcttcat
    18901 aactttgctt taactcatcg ttaatgataa gataatcata ctcgctaagc tctttcatct
    18961 catcactagc gttttgtaat cttttttcta gttgtattat tgtatcagta tttcgcttaa
    19021 taagtctttt ttttagctca tctttatttt ttgtagtaat aaaaacagaa acaatcttat
    19081 cagccatttt ttttctggct attttaaatc cttgcacatc aatatcaaaa acaactattt
    19141 ttccattatc taaagcatct tgggtgtgct ttaaagaagt accataaaaa ttttcatgca
    19201 ctctagccca ttctagaaaa tgatcactat ctataccctt ttgaaattct tcatgagata
    19261 taaaatgata atgcactcca tttttttcac cctctcttgg cttgcgagtt gttgaagaaa
    19321 tagaaaaata aagctcatct ttaaattcat caaaaagttt ttttaaaaga gttgattttc
    19381 cagcaccact aggacctgaa atcaacaaaa caaaaccttg caatttcaat cctctttaaa
    19441 actaatgttt atatttatat tcatattcat acccttaaga gcagctttta aggtatcatc
    19501 tttaatactt gaagtgatcg ctcctgctat gctttggcta agctcattaa ctatctcttc
    19561 gctattatca tctttagtta catcacttac tataggctct tcattttttt ctaagatttc
    19621 ctctccaaga gcttcttgta tatcactttc tttcaatgta tcaaaatcac ttatatttaa
    19681 atttggcaca accacttcct cttcatttgt tcctaattct ttatcgtcta aaattggttc
    19741 atctttaaaa tcttctaaga ccttgctact attgtcacta tcaataccat aatcaagctc
    19801 atcaagttga gctagttctt ctttgatttg atcttgagta ctcaaatttg aagtaaaatc
    19861 atccatttca tcttgaacat cttcttccac aacaggagca aactcctcta aaacttcctc
    19921 tgattcttca ttatcttttg cttgacctaa aaattcagca tcctcaggaa gatcatcaaa
    19981 atccatttct ttttcttgct cttcaaccac aggaagatca tcaaagtcgc ttatattagc
    20041 ttgtaattct ttgttat
//
LOCUS       DARATF010000023        19981 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.023, whole genome shotgun sequence.
ACCESSION   DARATF010000023 DARATF010000000
VERSION     DARATF010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19981
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.023"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..373
                     /locus_tag="SB502_000641"
     CDS             <1..373
                     /locus_tag="SB502_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HEG0434109.1"
                     /translation="LGIFAAFWAILHFLNYFIFDRNAQILRLFNDISHRLLEASGFIA
                     FLIIFLMLLSSFKIFKKLIKIRKLGYLCLVLASYHYFLTPKIPMFWEWSALIIALFYF
                     IVRYTKTLKKLKSNNLTFIKT"
     gene            complement(338..2050)
                     /locus_tag="SB502_000642"
     CDS             complement(338..2050)
                     /locus_tag="SB502_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434110.1"
                     /translation="MEKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALL
                     QSELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFARIQLYERLSFIQKSAYNS
                     EIKNQIKLYEKHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDISKSFFIIDEI
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFDINILSNYELSGAQILMVVKNTALKVAVSKDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(2050..2874)
                     /locus_tag="SB502_000643"
     CDS             complement(2050..2874)
                     /locus_tag="SB502_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434111.1"
                     /translation="MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIIDDINGNLEIPLVKTNDFWQDERKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKSVFSFEQIRQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTKNQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(2885..3361)
                     /locus_tag="SB502_000644"
     CDS             complement(2885..3361)
                     /locus_tag="SB502_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434112.1"
                     /translation="MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDIL
                     KANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(3370..3861)
                     /locus_tag="SB502_000645"
     CDS             complement(3370..3861)
                     /locus_tag="SB502_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEG0434113.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKAIKDSKLKVNSSIRGEEIRVVAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(3851..4786)
                     /locus_tag="SB502_000646"
     CDS             complement(3851..4786)
                     /locus_tag="SB502_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEG0434114.1"
                     /translation="MKIVCLDAATLGDYDLSVFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGTIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKLLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(4789..5958)
                     /locus_tag="SB502_000647"
     CDS             complement(4789..5958)
                     /locus_tag="SB502_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEG0434115.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFS
                     EEGIFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(5968..6573)
                     /locus_tag="SB502_000648"
     CDS             complement(5968..6573)
                     /locus_tag="SB502_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HEG0434116.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS"
     gene            complement(6693..6905)
                     /locus_tag="SB502_000649"
     CDS             complement(6693..6905)
                     /locus_tag="SB502_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEG0434117.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            7065..8441
                     /gene="ccoG"
                     /locus_tag="SB502_000650"
     CDS             7065..8441
                     /gene="ccoG"
                     /locus_tag="SB502_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEG0434118.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFSLPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYERQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            8428..9060
                     /gene="cmeR"
                     /locus_tag="SB502_000651"
     CDS             8428..9060
                     /gene="cmeR"
                     /locus_tag="SB502_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HEG0434119.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINARLKNKKEQKEHVEFVVNVFLNGINSSKA"
     gene            9155..10258
                     /gene="cmeA"
                     /locus_tag="SB502_000652"
     CDS             9155..10258
                     /gene="cmeA"
                     /locus_tag="SB502_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HEG0434120.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIENKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMAKATFENASKDFNRSKALFSKSAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQNGKWDLDSIHANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            10258..13380
                     /gene="cmeB"
                     /locus_tag="SB502_000653"
     CDS             10258..13380
                     /gene="cmeB"
                     /locus_tag="SB502_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HEG0434121.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPNSLVPEED
                     QGLMISIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLQDWKDRNVSADQIIAELNKKFAFDRNASSVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAVANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMVFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            13373..14851
                     /gene="cmeC"
                     /locus_tag="SB502_000654"
     CDS             13373..14851
                     /gene="cmeC"
                     /locus_tag="SB502_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HEG0434122.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYESAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNI
                     KYSYANSIVDVIKAFGGGIEQNEDTSKNIKEESKNLDISFRE"
     gene            complement(14874..15125)
                     /locus_tag="SB502_000655"
     CDS             complement(14874..15125)
                     /locus_tag="SB502_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434123.1"
                     /translation="MNKAKIVQNLNALFKQRAEFYSYFDENIAKINDTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKVYEITDADLDKDF"
     gene            15253..16599
                     /locus_tag="SB502_000656"
     CDS             15253..16599
                     /locus_tag="SB502_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEG0434124.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPKEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKDKGFDFTSMYVGGGTT
                     LINEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSQELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIEDNEFAYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATKFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSTSMEFKAETN"
     gene            complement(16596..17048)
                     /gene="hemJ"
                     /locus_tag="SB502_000657"
     CDS             complement(16596..17048)
                     /gene="hemJ"
                     /locus_tag="SB502_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEG0434125.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEVVKIQERKLYYYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSTKSGKYFRIYNEFPTIMFIIIALMMVVRPF"
     gene            complement(17032..17502)
                     /locus_tag="SB502_000658"
     CDS             complement(17032..17502)
                     /locus_tag="SB502_000658"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEG0434126.1"
                     /translation="MAKTFKFIFYFWGAFVLVFALDQWVKSLTLAGFRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQRTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(17495..18832)
                     /locus_tag="SB502_000659"
     CDS             complement(17495..18832)
                     /locus_tag="SB502_000659"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEG0434127.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPANLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLTNLKIAEKKDLDKIKGLK
                     ELKKDLENKNINTLFRYSGTENLIRLLLEARDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(18926..19951)
                     /locus_tag="SB502_000660"
     CDS             complement(18926..19951)
                     /locus_tag="SB502_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEG0434128.1"
                     /translation="MKVKSLLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGISTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
BASE COUNT         7008 a         3287 c         2692 g         6994 t
ORIGIN      
        1 tttaggtatt tttgcagctt tttgggcgat tttgcacttt ttaaattatt ttatttttga
       61 tagaaatgct caaattttaa ggcttttcaa tgatatttca catcgtttat tagaagcaag
      121 tggatttatc gcatttttaa tcatattttt aatgctttta agttctttta aaatctttaa
      181 aaaacttatt aaaatcagaa aactaggata tttatgctta gttttggcaa gttatcatta
      241 ttttttaacc ccaaaaattc ctatgttttg ggaatggagt gctttaatta tagctttgtt
      301 ttattttata gttcgctata caaaaacatt aaaaaagtta aaatccaaca atcttacttt
      361 tatcaaaact tgaatttaat tctttttgta tgctttctat aaaatcttgc attttaaaaa
      421 ccccatcttt tgatacagct actttcaaag ctgtattctt caccaccatt aaaatttgtg
      481 ctccacttaa ttcataattt gataaaatat ttatatcaaa atctttttca aataatgctt
      541 ttttaggtag aaatttttcc caaattttaa gcctatcttt aaaatcaggt tttttaaatt
      601 ctatcttata atcaaatctt cttgaaaatg cactatctaa gctttctaaa aaatttgtcg
      661 tagcgataat cacaccacta aaacgctcaa tttgctctaa gaatatattt tgcatttgat
      721 tatgcatttt atcgctacca ctacttccat ctacacgcgt acttaaaaac tgatcagctt
      781 cattgagaag taaaatagga ctttgtttac aagtttgcac gatattttta taagtatcaa
      841 aaatttttct tacattttgc tcactctctc caacccattt gctcaaaatt ttagaacagt
      901 caaaactaag aacagatttt ttcattgatt tagccatagc taaagctgac atagtttttc
      961 cagtaccagc aggaccataa aaaataattt tagcttctat atttttatta ctctttatac
     1021 cccaagaatg aagtctttct aggacttttt tatcttgttg ttttaaaata ttttctaaaa
     1081 gctcttttgt attttcaggc ataataatat cattgatgtc agtgcttggt tctataagct
     1141 cgaaaatatc ttgatctttt aaaacacttt caattttgat ttttttactt tgttttggtt
     1201 caaaatttat aattctttgt aaaatttcat cgataataaa aaaactttta gaaatatctc
     1261 caaaagcatt taaatattca tcatactcga ttaagtttaa aagaggagca ttttcttgta
     1321 atagtttttt atttttatgc ctttctaaat cattttcact gattaaagaa agtaaagaat
     1381 tcatttctct agaaatcgaa ctttcattac ttaaggcgta ttcttctttt aaaagtgcta
     1441 gaaaaataat ttgttcttta tgttcaagat tgtattcttt aaaaatatca gccaatacat
     1501 tataaaattt actttttttt agtctttctt tgatatgttt ttcataaagt ttaatttgat
     1561 tttttatttc actattataa gcactttttt gtataaaact taatctttcg tataattgaa
     1621 tacgcgcaaa ttcatctttt aaatattcta aataatctgc ataagcctct tgtttctcaa
     1681 aatttaaacg aggttttgct tctaaaaatt ctaaaaaata ttcacttaga ctaagctcac
     1741 tttgcaataa ggcaagagtt aatgtttgag ttttattatt ttctaaactt ttaaaaaaac
     1801 tcgaattttg atttacaaaa cctctttcga taagtttttt taaatcctcc aaagcatcaa
     1861 gataaagata cttatcattt ccaaaaattg tcgataataa agtaaaggca ttgatagaag
     1921 aaatagaaac gacataattt ctacaaagtt ctctaagaat caaagcctca tttttagcac
     1981 acttaagctc tttataaatt tgagtatctt ctatattttt caaacttaaa aaatttttta
     2041 atttttccat tattttttaa attccttaag ctcatcttcg ttaaattcta cgcaaatatt
     2101 ttcatctaaa aaatgacctt caaaaggtag ataacaaatt tttagttttc cattattaag
     2161 caaaaaatta ttattaaatt gtaaattttg cagatcttca aaacactcat cacatgtatt
     2221 tttaagcttc tcatgtaaaa gattttgaaa tttttgattt ttagtattat acaaatcatt
     2281 tagttttaca aatgcgtgag cattaatatc ataaacaaaa ttatttaact ctaaaatagc
     2341 acggctcata ccatcttcat aaaaataata ccattcttca aaactaattt ttccatcttg
     2401 taaaaaaata ggcttttggc gaatttgttc aaaactaaat acactcttat gaacaggatg
     2461 aaattcttta aaatcatcat taaaacctat aaaatcaaga ctacgcttta tacgaatgcc
     2521 atcttgcgtt tcaacaagtt ctaaagtagt tgttcctaaa ttttctcctt gaaaattttt
     2581 attatcatat gtaagcattt tagaagaatt gattttatat tttttacgct catcctgcca
     2641 aaaatcattt gtcttaacga gcggaatctc taaatttcca tttatatcat caataattaa
     2701 aaaactagaa cttgtttgat ttttatccct gtcaaaaagt ggagtcatag gcgcattatc
     2761 ataaactatg gcaaaaattt ctttatcctg caaatgataa aaatacaatt cacctttata
     2821 aacttgcgct aaagctagat ttacaaagca aaataccagt aaaaaaaatt tcaaactcta
     2881 tcctttaatt ttgaatatgc gttaagataa ttttagtatg tgaaatttta tcaaaaaaac
     2941 ttactttatt atcacaaact tgataaaaaa tttcataatt ttttgctttt aaattttgtt
     3001 caaaaccaca atcagttttt tctaaatttt taccctgcca taaagcattt gcctttaaaa
     3061 tatcacttaa aatatcatca taatatacat ttttaaaaaa tttttgatta aacacttttt
     3121 tatcataaca cactgcattg atacaaattt tatctttgat tttgagttca aaaaaagctt
     3181 gccctagttt ataaacttct aaatttaaag cattattttc tttttttaaa aaagctgcgt
     3241 cattgatttt tatcatagga gaagcaatca aaaccatcaa gctttgactc gaaaaatttt
     3301 gatttttcac actacaagca caaagaaaaa aaataaaaca cagagctaaa caatgcttca
     3361 aatttgacct tatttaagat ttttaaaact gatatttaac tctaaatcaa gctcttttac
     3421 aagcttcatc acagcttgta aatcatcaat ttgttttgct acaacacgaa tttcttcacc
     3481 acgaatcgaa gaattaactt taagtttgct atctttgata gctttattga tttttttggc
     3541 attttcacta tcaatagcat cgtttgcttt caaatttaaa cgaaacattg ctccactttc
     3601 acgagaaagc tctttaatag cattaggatt aattcctctt ttgataagtt tagaaatcac
     3661 tatatctttt aaaacatcaa gctttccttc actagaagaa ctgagtttaa aaatactctc
     3721 tttttcgctt aaatcaatct cacacttaat tccttttaag tcataacgac tatcaagttc
     3781 ttttttagct tgttcaaaag cattttttaa ctcttgttta tctaaagctg ctgaaatatc
     3841 aaaactatgt tcacttgcca ttttctatcc attcttttaa attattataa actatatcca
     3901 ttaaagcatt taaagcctcc ttgctcgccc acgcaacatg aggagtgata ataagatttt
     3961 ctttattttt aatgcttaaa agtggatgat ttttcatcat aggttcaatt tctaaaacat
     4021 caagccctac acgaatattt ttttcatcta tgattttagc taaatcattt tcattgacaa
     4081 tcccacctct tcctacatta atcaaaatcg cattatcttt taaaagcttt aattcttcaa
     4141 aggcgagtaa atttttggtt ttttcattta aaggtgcgtg gatacttata atatcgcaag
     4201 tttttaataa atcttttaat tccaaatgta caaaatctgc gtttttatta gctccactcg
     4261 tagaataata ataaatttcg gctccaaaag cctttgaaat ttttgccact tctttaccta
     4321 tggttcctaa acctataata ccatgttttt tgccacttaa ggtgtttaaa attctactat
     4381 aatctgtaaa aataggactt tcacaccatt taccctcttt gctccatttg tcataataaa
     4441 gcacttgatt taaaaaagca aacataaacg caaaagtatg ttgcaccaca ctcatagtag
     4501 aatacccagc agcatttttt acaataatac ctttttcttt agcatactca atatcgatat
     4561 tattaacccc tgtagcagtt tccaaaatga gttttaaatt tttacaagca tcaatcacat
     4621 ctttatcaat tacaaccttg tttgtcatgg cgacattagc atcttttaaa cgctctatgg
     4681 tttgctcttt atttgttgtg gtataaattt gcaaagaacc aaatttttca aaaacactta
     4741 aatcataatc ccctaaagtt gccgcatcta aacaaacaat tttcatttct aatcctttat
     4801 aatatgtcct acaaatttag aataattatc aagcacaagt cctccttttc taaatcctaa
     4861 gccacaccct tcataagcaa agaaaacacc tgcttgatag tattcgtttt cacatgaatt
     4921 aaactctaca tattcttgat aaatagcctt attattccca taaggaccta cattctcatg
     4981 caaagttttt ccatctttaa ttatactgat atttgcacct tctctaccaa aaacaggttt
     5041 tttaacatag tttttacctt ccaaaggagt atcttttgtt tctaaaagta atggatgatt
     5101 tggataaagt tcccatagaa tttttaaaat tcccttagat tgaaataaaa gcgtataagc
     5161 aggatttaaa ataattgctc tttgattacg catgatttga gttaaaagca tagcaagttc
     5221 accctcttct atggctatat cttcccaagg aataagctta aaccaatact cataattttc
     5281 accctcttta aaaattcctt cttcactaaa ttctacctca tctacaaagg aaaaattagt
     5341 ttgaaaacct gcttcattgg ctatatgtgc aagcaatttt gtagtgattt cctcttcttt
     5401 acttcctgca acacttgaaa aaagaatttt ccatccttga taatgctctt caaacccttc
     5461 aacactttca tcaagggtaa taagtctttt aaaattatcc atcaaacttt cataaatgct
     5521 gttaaattgt gcgctttcat ccattccatt ttgttttaaa agtgcccatt gtaaaatcgc
     5581 actttcaaaa agagcagtag gggtatcagc attaaattct ataagtttta taggcttgcc
     5641 atcaagtcca cccgctaaat caaaacgccc atataaatgc caatgaacct cattttccca
     5701 actcatctta atcgcatcaa taagattaaa aggaattcca agctcatcaa aacgatcatt
     5761 attaatcact tcttgcgctg cagcaataaa catatcataa agctcattta ccgcttcata
     5821 ataagcatta gcttcacttt ccttaacaca aactaactta ttgctaatat aatcacttcc
     5881 atcttcatct gtatgccaag aaaaacctat attttctaaa taatcttttt gaagtttgtc
     5941 tacttgtaat aattgcatta tttatcctta agagccaaaa gaagaactag aacttgtggc
     6001 tttagagcct ccaccaaaaa aacctgattt tttagcactt gaagcagagc ttgttgtgcc
     6061 tgctttatta aaactattaa cactcctttg ataagcactt tgatttgaaa aagcaccgcg
     6121 ttgttggttg gcaaaatttt gattattgaa aagttttgaa cctatccaac ttcctaaaat
     6181 agcacctgca gcacttgcga gtaaagtttc ccctaaactc aatcccccac tactgatttg
     6241 tccattgtct ttagttaaat ttgaagttcc attatcaatt ttagctgctt cttctttaat
     6301 caaagcatcc atttcttctt tggataaaat tctttctgta ccattaagat cttttaaaac
     6361 tacccttgtt tcatcacttg gatattgatc tttgatttta tactgccctg gagctgtttc
     6421 ttcgataatt acaaaagctc cttgagcatt agctgcttga tttaaagtat ctgcattgtc
     6481 attattactt ccacaacctg ctaaagcacc tccagcaaca gctgctaaac cacctatcat
     6541 accaatttga atgatttttt tgattttttt cataagttta tcctaaaaac agaaaattta
     6601 aattagaaat tttaacaaaa aataataaat actttttaat ttaataccaa atgaagtttg
     6661 tagatataaa aaagcccttt cgggcttttg ggttagagtc ttgactcgta gcgtctaagc
     6721 atataaagtc ttttaagcat ttttttgcgt gctgaaattt tttgtttttt gcgaatttca
     6781 gtcataggct caaaaaatct tcttgctctt acttcagtca caactagatt tctatctact
     6841 tgttttttga atttacgata cgcttcatca aaagactcgt taggatgcac cttgattcct
     6901 ggcacagtcc tcaccacctt tctgtgtaaa tttttgttgt gaaatataat tataaaacac
     6961 ttcttattaa ttctaactta gaaagcattt aaaaattgtt ttagttttta tcggttataa
     7021 tccttaatta caaagtgcta aaaaattata attaaggtct aaaaatgcaa ggacacatta
     7081 caaactatac aaaaaaacga tattttgtat atttaattgc aagtattatc atattttccc
     7141 tacctttcat aagaattaat gagaatcatt tttttctttt aagttttgat cattctaaat
     7201 taaacctatt ttttatttct ttttcaacac aagaatttta tctcatgcct tttgttctta
     7261 tatttctttt tttatttatt ttttttatta caactttagg tggaagaatt tggtgtgctt
     7321 ggagttgtcc acaaacgatt tttagagtta tatatagaga tatcatacaa actaaatttc
     7381 ttaaaattcg caaaaatatc aataacaaac aaaaagaata tgagaggcaa tattttaaaa
     7441 aatttcttgg agtgataatt ttttatttta tatctttagt tgctgttagt aatttacttt
     7501 ggtactttat tcctcctgaa gattttttca attatattca aaatcctggc gagcatctac
     7561 ttttacttgg aattttattt tgtgctagct tactttttac tttggatatt acctatttac
     7621 aagaaaaatt ttgtgtttat gtctgtcctt atgcaagaat acaatctgta atgttcgatc
     7681 atgatacaat gcaagtgatc tacgatgaaa aacgcggggg cttgatctat gatggacaca
     7741 ccaaacttca taaaaaaccg cctgagggag aatgcatagg ttgcgaagcc tgtgttagta
     7801 tctgtccaac tcatattgac atacgcaaag gaatgcaact tgaatgtatt aattgtcttg
     7861 aatgtgccga tgcttgctct aaggttcaaa gcaaatttaa tcgtccaagt ttgatcaatt
     7921 ggacaagtgc aaaagctatt gaaacgcgtt ctaaggttca ttatttaaga tttagaacga
     7981 tagcatattt tatagttctt ttaattgctt tactggcttt aatcatcatg ggaagcaaaa
     8041 aagaaagcat gcttttaaat atcaatcgta gtagtgaatt atataatatt tcaaatgtta
     8101 aaggtgaatt agtcatttca aatgcttata cctttttgtt tcaaaataca gattctaaac
     8161 ctcatgaata ttattttaca gcaaatttag aaggaataaa tgatggaatt gaaatcataa
     8221 gaccaaacaa accttttaaa ttaaaagcag gagaacaagt caaaaaaata gttgttatca
     8281 gggctacaaa aaatttagca aataatgata aaaaagacgt aatctttcct ttacatataa
     8341 aagcttacgc aaaggataat gaaaaaattt cggtttttag aaaaagtata tttgtatacc
     8401 ctaaaagcac tcttataaag gataaaaatg aactcaaata gaacaccatc acaaaaagtt
     8461 ttagccagac aagaaaaaat caaagcagtg gccttagagc tttttttaac aaaaggatac
     8521 caagaaacaa gtttgagtga tattattaaa ttatctggag gatcttattc taatatttat
     8581 gatggtttta aaagtaaaga agggctattc tttgaaattt tagatgacat atgtaaaaaa
     8641 cactttcatc ttatttattc caaaacacaa gaaattgaaa atggcacttt aaaagaaatt
     8701 ttaacttctt ttggtttagc ttttatagaa attttcaatc aaccagaagc tgtagctttt
     8761 ggtaaaatta tctattctca agtttatgac aaagatagac atcttgccaa ttggatagaa
     8821 aataatcaac aaaatttttc ctataacata cttatgggtt ttttcaagca acaaaataat
     8881 tcttatatga aaaaaaatgc agaaaaactt gctgttcttt tttgcactat gttaaaagaa
     8941 ccttatcatc atcttaatgt tttaattaat gctcgtttaa aaaataaaaa agaacaaaaa
     9001 gaacatgttg aatttgttgt aaatgttttt ctaaatggaa tcaatagctc caaagcttaa
     9061 aaaataattt tattaaccaa aattaagata taattagcca aaaatttttg taataaaaat
     9121 tacaattttt aatttaattt ttcaaggcaa aaccatgaaa ttatttcaaa aaaatactat
     9181 tttagcttta ggtgttgtgc ttttactcac tgcttgcagc aaagaagaag caccaaaaat
     9241 acaaatgccg cctcaacctg taacaaccat gagtgctaaa tctgaagatt taccacttag
     9301 ttttacttac cctgctaaac ttgtcagtga ttatgatgtc attataaaac ctcaagttag
     9361 tggcgtaata gaaaataaac tttttaaagc tggagataaa gtaaaaaaag gacaaacatt
     9421 atttattata gaacaagaca aatttaaagc tagtgttgat tcggcttacg gacaagcttt
     9481 gatggctaag gcaactttcg aaaatgcaag caaggatttt aatcgttcta aagctctttt
     9541 tagtaaaagt gcaatctctc aaaaggaata cgactcttct cttgctacat ttaacaattc
     9601 aaaagctagt ctagcaagtg ctagagcaca gcttgcaaat gcaagaattg atctagatca
     9661 taccgaaata aaagctcctt ttgatggtac tataggagat gctttagtta atataggaga
     9721 ttatgtaagt gcttcaacaa ctgaactagt tagagttaca aatttaaatc ctatttacgc
     9781 agatttcttt atttcagata cagataaact aaatttagtc cgtaatactc aaaatggaaa
     9841 atgggattta gacagcattc atgcaaattt aaatcttaat ggagaaaccg ttcaaggcaa
     9901 actttatttt attgattctg ttatagatgc taatagtgga acagtaaaag ccaaagctat
     9961 atttgacaac aacaactcaa cacttttacc aggtgctttt gcaacaatta cttcagaagg
    10021 ttttatacaa aaaaatggct ttaaagtgcc tcaaatagct gttaaacaaa atcaaaatga
    10081 tgtttatgtt cttcttgtta aaaatggaaa agtagaaaaa tcttctgtac atataagcta
    10141 ccaaaacaat gaatatgcca ttattgacaa aggattacaa aatggcgata aaatcatttt
    10201 agataacttt aaaaaaattc aagttggtag cgaagttaaa gaaattggag cacaataatg
    10261 ttttctaaat tttttatcga aagacctgtt tttgcttcag ttgttgcaat tatcatttct
    10321 ttagctggag ctataggtct tacaaattta cctatagaac aatatccttc tttaacccct
    10381 cctacagtta aagtaagtgc aacttacaca ggagctgatg cacaaaccat tgcttcaaca
    10441 gttgcaagtc ctatcgaaga tgcaatcaat ggcgcagata atatgattta catggattca
    10501 acttcaagtt cttcaggaac tatgagtttg actgtttatt ttgatatcgg tacagatcct
    10561 gatcaagcca ccatagatgt taataataga atttcagccg caactgcaaa aatgccagat
    10621 gcagttaaaa aacttggagt aacagttaga aaaacttcct caacaacact tgctgcaatt
    10681 tctatgtatt caagtgatgg ctcaatgagt gcagtagatg tatataacta tatcacttta
    10741 aatgttttag atgagttaaa aagggttcca ggagttggag atgcaaacgc tataggaaat
    10801 cgtaattatt ctttaagaat ttggctcaag cctgatttat taaataaatt tggaatcaca
    10861 gctactgatg taatttctgc ggttaatgac caaaatgccc aatacgcaac tggtaaaatt
    10921 ggcgaagaac ctgtaaccca aaaatcccct tatgtttatt caatcactat gcaaggaaga
    10981 ctacaaaatc ctagtgaatt tgaaaacatt attttaagaa caaataatga tggatcattt
    11041 ttaagactta aagatgtagc tgatgtggaa ataggatcac aacaatacag ctcacaagga
    11101 cgattaaatg gcaatgatgc agttccaatt atgatcaatc ttcaatcagg ggcaaacgca
    11161 ttgcatacag cagaacttgt tcaagctaaa atgcaagaac tttcaaaaaa ttttccaaaa
    11221 ggtttaacat ataaaattcc ttacgataca acaaaatttg taatagaatc aatcaaagaa
    11281 gttgttaaaa cttttgttga agctctaatt ttagttatca ttgttatgta tatgttctta
    11341 aagaatttcc gtgcaacact tattcctatg atagctgtac ctgtttcatt gttaggaact
    11401 tttgctggac tttatgtttt aggttttagt attaacttgc ttacgctttt tgctttaatt
    11461 ttagccatag ggatcgttgt agatgatgcg attatagttg tagaaaatat tgataggatt
    11521 ttacatgaaa atgagcaaat aagcgtaaaa gatgctgcta tccaagcgat gcaagaagtt
    11581 agctctccgg ttatttcaat tgttcttgtg ctttgtgctg tttttgtacc agtttctttt
    11641 atatcaggtt ttgttggaga aattcaaaga caatttgctc ttaccttagc tatatctgta
    11701 accatatcag gttttgttgc tcttacctta acaccttctt tatgtgcact ctttttgcga
    11761 cgcaatgaag gagagccatt taaatttgta aagaaattta atgatttttt tgattggagt
    11821 acctctgtat ttagcgcagg agtagcatat atcctaaaaa gaaccattcg ttttgtttta
    11881 attttttgta ttatgcttgg agcaattttt tatctctata aagcagtacc aaattcttta
    11941 gttcctgaag aagatcaagg tttgatgatt agcattatta atcttccttc agcttcagca
    12001 ctccatagaa caatttcaga ggttgatcac ataagccaag aagttttaaa aactaatgga
    12061 gttaaagatg caatggctat gataggattt gatcttttta caagttcact caaagaaaat
    12121 gccgctgcaa tgtttatagg tttgcaagat tggaaagata gaaatgtaag cgctgatcaa
    12181 attatagccg aacttaataa aaaatttgct tttgatcgca atgcttcaag tgtatttata
    12241 ggcttacctc ctatacctgg attaagtatc acaggcggtt ttgaaatgta tgttcaaaac
    12301 aaaagcggaa aaagctatga tgaaatacaa aaagatgtaa ataaacttgt tgctgtggcc
    12361 aaccaaagaa aagagctatc aagagtaaga acaacccttg atacaacttt ccctcaatac
    12421 aagcttataa ttgatagaga taaattaaaa cactacaatc ttaacatgca agatgttttt
    12481 aacacgatga atgcaactat aggcacttat tatgttaatg atttttctat gctaggtaaa
    12541 aacttccaag taaatatccg cgcaaaaggt gattttagaa atacacaaga tgcattaaaa
    12601 aatatttttg taagatcaaa tgatggaaaa atgataccac ttgattcttt cttaacttta
    12661 caaagaagtt cagggcctga tgatgtaaaa cgattcaacc ttttcccagc agcacaagtt
    12721 caaggtcaac ccgcaccagg ttatacttca ggccaagcta tagaagcgat tgctcaagta
    12781 gcaaaagaaa ctttagggga tgattattcc atagcttgga gtggatcagc ttatcaagaa
    12841 gtttctagca aaggaacagc aagctatgct tttgctttag gcatggtatt tgtcttttta
    12901 atcctagctg cccaatatga aagatggctt atacctttag cagttgtaac agctgtgcct
    12961 tttgcggtat ttggatcatt tttattggta tatttaagag gatttagcaa tgatatatat
    13021 tttcaaacag gacttttgct cttgattgga ctttcagcta aaaatgctat cttaatcgta
    13081 gaatttgcaa tggaagagcg ctttaaaaaa ggtaaaggag tttttgaagc agctgttgca
    13141 gcagcaaaac ttcgttttcg tcctatcata atgacttctt tggcatttac ttttggggtc
    13201 ttgccaatga ttttcgcaac aggagcagga agtgcttcaa gacactcttt aggaacaggg
    13261 cttattggtg gaatgatcgc agcatcaact ttagcgatat tctttgtgcc tttatttttc
    13321 tatcttttag aaaattttaa tgaatggcta gataaaaaaa gaggtaaggt tcatgaataa
    13381 aataatttca attagcgcta tagcaagttt tactcttttg atttcagctt gctctttaag
    13441 tccaaattta aatattcccg aagcaaacta tagcattgat aataagcttg gagccttatc
    13501 ctgggaaaaa gaaaacaata gctctatcac aaaaaattgg tggaaagact ttgatgatga
    13561 aaatttaaat aaagtggttg atttagcact taaaaataat aatgatttaa aacttgcttt
    13621 catacacatg gaacaagctg ctgctcaatt aggtatagat tttagcagtt tgttgccaaa
    13681 atttgatggt agcgcaagcg gaagtcgtgc aaaaacagct ataaatgctc caagcaatcg
    13741 aactggggaa gtaagttacg gtaatgattt taaaatggga cttaatttaa gctatgaaat
    13801 cgatctttgg ggaaaatatc gcgatacata tcgcgcctca aaatcaggct ttaaagcaag
    13861 tgagtatgat tatgaagctg caagactttc tgttatttca aatacagttc aaacttattt
    13921 taatcttgta aatgcttatg aaaatgaaaa tgctcttaaa gaagcctatg aatctgcaaa
    13981 agaaatttat aggattaatg atgaaaaatt tcaagttggt gctgtaggtg aatatgaact
    14041 tgctcaagca agagccaact tagaaagtat ggctttgcaa tataatgaag caaagttaaa
    14101 taaagaaaat taccttaaag ctttaaaaat tttaacttca aatgatttaa atgacatact
    14161 ttacaaaaat caaagctatc aagtttttaa tcttaaagaa tttgacattc caactggaat
    14221 ttcaagcacc atcttgcttc aacgtccaga tattggctct tctttagaaa aattaactca
    14281 gcaaaattat cttgttggag tagctcgcac ggctttctta cctagccttt ctttaacagg
    14341 attattggga tttgaaagcg gggatttaga taccttggtt aaaggaggtt ctaagacttg
    14401 gaatataggt ggaaacttta ctctgcctat ttttcattgg ggtgaaattt accaaaatgt
    14461 aaatttagcc aagcttaata aagatgaagc ttttgtaaat tatcaaaata ctttgattac
    14521 tgcttttgga gaaattcgct atgctttagt agctagaaaa actatacgct tacaatacga
    14581 taatgcacaa gcaagcgaac aatcttacaa aagaatctat gaaattgcta aagaacgcta
    14641 tgatatagga gaaatgtctt tgcaagatta tttagaggca cgtcaaaatt ggcttaatgc
    14701 tgcggttgct tttaataata ttaaatattc ttatgccaat tccatagtag atgtaatcaa
    14761 agcatttggt ggaggaattg agcaaaatga agacacgagt aaaaatataa aagaagaatc
    14821 aaaaaattta gatatatctt ttagagaata gttcgttcta ttctctaaat aaattaaaaa
    14881 tctttatcta aatctgcatc tgtaatttca taaaccttgt aaatagcagg caataatttt
    14941 cttatagcat aatcaaaatg ataaaattgc ttatatacct cttctggatt taaattttta
    15001 gcattcttaa aatcaaatac ttcagtatca ttgattttgg caatattttc atcaaaataa
    15061 gagtaaaact ctgctctttg tttaaacaaa gcatttaaat tttgaacaat tttggcttta
    15121 ttcattttat atccttttta aataatttaa aaacttaatc ccatttttta tttaagaaat
    15181 aaaaaattta ctcctatttt agctaaaaat tgataaagtt atatcttaaa tattttaata
    15241 tataggccac ttatgaattt atttcaaaat ttagctttaa aatactctca tactatgatg
    15301 gaaaaatctc ttcaaaaagg tttcaatgtt gaacttttaa aacaacccaa agaaaaaatt
    15361 ccaaaacaag ataaaagcta tatgctttat gctcatgtac ctttttgcca tactttttgt
    15421 ccttattgta gctttcataa atattattat gatgaaaatt tagccaaagt atattttcaa
    15481 aatcttagag aagaaattaa aatcatgaaa gataaaggtt ttgattttac ctccatgtat
    15541 gtgggtggtg gtacaacact gattaacgaa gaggaactat taaaaacctt agaactttgt
    15601 aaaaaattat ttaatataaa agaaatttca tgcgaaagcg atccaaatca tattgatcca
    15661 aataagcttt ctatgtttaa aggcataatt gatcgtttaa gttgcgggat tcaaagtttt
    15721 gatgatgaaa ctttaaaaaa agtggcaaga tataataaat ttggttcatc tcaagaactt
    15781 caagaaaaaa tttcaaaagc tttaggaatt ttgcctattt ttagtataga tcttattttc
    15841 aatcttccag gacaaagcga aaaacaactt ttaaatgact tagaaattgc caaaaattta
    15901 gccccgcaac aaatcacaac ctatccttta atgaaatcaa atcttaccaa agacaatatc
    15961 gccaaaagtt taggagtgag cattgaagac aatgaatttg cttattatca aatcatacgc
    16021 gaatttttta aagactatac ccaaaacaat ggttggagtt tttctttgga aaaaaataaa
    16081 ctcaatgatg aatatgttag ctctcatcat gaatacctag gagtaggtag tggagcattt
    16141 agcttcttag atggagagct tttaattaat gcatttaatc taaatgatta tgccaaattt
    16201 atacaagaaa aacaaaatgc taatatagcc aaagcttgtt ttgataaaaa agaaattatc
    16261 aaatatgtct ttttaactga aattttttca gggaaaatag aaattgataa atttaacaaa
    16321 actctaaatt gcaatctcga aaaagaactt ttcatagaac ttttagggct taaaacaagc
    16381 ggtgccatca taaaagatca aaatgcttta atcgcaacca aatttggtca atatcttttt
    16441 gtggttttaa tgaaagattt ttacacagga atggatcttg tgcgcgcagt atttagagat
    16501 gataagcgtc ttaaaaataa agattatatc gatatcatga aagaaaatat tgatccgctt
    16561 aactccacta gcatggaatt taaagcggag acaaactaaa agggacgaac aaccatcatt
    16621 agagcgataa taataaacat tatagttgga aattcattat aaattctaaa atattttcca
    16681 cttttagtag aagtatcatt tgctaaagct tttaaacaat aataattatg tatatggaaa
    16741 ataatcaaaa gtgtaacaca ggtaagttta acatgcataa aacccgcacc taccattaaa
    16801 acttccttat gagcatgcaa cattaaactt cctgtgatta aagtcacaat cattgcagga
    16861 gtttgtatat aataataaag ttttctttct tgaattttta caacctcaac aaaaccttta
    16921 ttgtctttat gttcagcatg atacacaaaa agacgaggta aataaaaaag tccagccatc
    16981 caagaaacaa atgccaaata atgcacccat ttaatccaaa aataataatc attaatccat
    17041 tctgtcatct tttttccttt ttttaaatat ttcttgtatt aaaatcaaag ccacacttat
    17101 atttatcatg acatctgcaa cattaaaaat agcaaaatta aaccatttat gccaaaaaaa
    17161 catatccact acacctccat gtataaaacg atccaataaa tttgaaacgc cggcaccaag
    17221 catcattcca aaagctatgc tatgagtttt taaaagtgtt ctttgccaaa aaagataaat
    17281 aaaaagcacg ccaattaaag caagatgtaa atattttaaa ttatgttcta aaaaactcaa
    17341 cattgaaaaa gctacgcctg tatttagagc ataagttaaa tctaagtatt cactctgcca
    17401 tctaaatcct gctaaagtta aggattttac ccattgatca agggcaaaaa ccaaaacaaa
    17461 ggcaccccaa aaataaaaaa taaatttaaa agttttagcc atttaaagct ttcttaaaaa
    17521 actccacaac atttttcatt tctttttcta agagcttaat atctctggct tctagtaaaa
    17581 gtcttatcaa attttctgtt ccagaatagc gaaataaggt attaatattt ttattttcta
    17641 aatctttttt taattctttt aaacctttaa ttttatctaa atcttttttt tctgcaattt
    17701 taagattggt taaaagctga ggataaggtt taacttgacc caaaatagaa cttgcagatt
    17761 ttttcttaga aagcattaaa gcactaaatt gcaaggcggc tatcaaacca tctccagttt
    17821 ttgcataatc gctaaaaata atatgcccac tttgttctcc accaaaattt ccaccattgg
    17881 cttttagttt ttcaagcaca tatttatcgc caacattaca agtatcaagt tctataccat
    17941 gtttatttaa aaactctttt aaagcaccat tactcattat agtagccaca acacttgatt
    18001 gtaatttacc ttgttcttta agataaagtg ccaatacgcc caataaacta tccccattag
    18061 ccacttcgcc tttttcatct acaaccacca aacgatctgc atcaccatca aaagcaaagc
    18121 ccacatctgc acgcaaacgc tttacctcag cagctaaatt tgcaggatgt aaagctccac
    18181 aattttcatt gatattaagt ccattaggtt tatcgctcat tactataact tcagcaccta
    18241 attccttaaa aacagtaggt gctaccttat aagctgcccc atgagccaca tctaaaacca
    18301 cacgcaaaga ctttaaagta agatcttttg gaaaagaatt tttaatagaa acaatatacc
    18361 ttcctataac atcatcaatt cttttcgctt gaccaatttt ctccatatct accttagagg
    18421 cttgtataag cttatcatca aaataaattt cttctatttt tttctctata tcttcactga
    18481 gtttgtttcc atgagcatca aaaaatttaa taccattatc ataataagga ttgtgagaag
    18541 ctgaaatcat aatccctgca tcacaacgca tatcttcagt taagaatgca atcgcaggag
    18601 ttggcatagg accaatttgt ataacattat atcctataga agtaagccct gaaacaatag
    18661 cattttctat catatagccg cttcttcttg tatcttttcc tactaagata ttattagtaa
    18721 tacttttatc tttaaaataa atacccgcag ccattgctaa acgcatagcc aaaaaactat
    18781 ctaaaaattc acccgctttt ccacgaactc catcagttcc aaaaagtttc attgcaaacc
    18841 tttctagcaa aatttaaaga caattataac aaagctaaga taaagaaatt taaacaagct
    18901 ctaaaattag agcttgtttg gaaccttata gttcaggttt aggagttttt tcagtagaaa
    18961 taggaagttg tggataaaca attgctggtt ttgttcctgt taaagatttt aagaaagttt
    19021 caatactttt tgcttcttta tcagaaattt taatgccaag ttgcacacta cccatttcct
    19081 taatagcatc ttttaaattc caaatcgcac cattatgaaa atatggagca gtttcagcaa
    19141 catttcttaa agttggagtt tttaccatgc catttgcatc acctttaaaa tcacctaaat
    19201 ttgcaaattt atatttacca gcaacttcaa acgcttgcat attgccacct aaattcacac
    19261 cattatgaca agctacacaa cctttatcta taaaaagctt taagcctttt tgttcttctt
    19321 ttgttaaagc tttttcatcg ccttctaaaa atttatcaaa acgagatgga gtgatcaaag
    19381 ttctttcaaa atttgcaatt gcatcagcaa tattgtcaaa atttacaccg cttttaccat
    19441 agattttttt aaactcactc acatattcag gcaaagatga aattttttct actgcaagtt
    19501 tagcaggagt tgccatttca ggatcagctt ggattggacc tttagcttga tcggctaatg
    19561 ttcctgcacg accatcccaa aattgagtat tatttaaaac tgcattataa actgttggtg
    19621 aatttaaatg atgaggattt gctgtccatt tatgacctat tgcagtactg attccatctg
    19681 ttccaccaag tcctacatta tgacaggtat tacaagaaat gataccactt tttgaaagac
    19741 gtggttcaaa atagagcttt ttgccaagct ctgctttttc aagagtaaat tcactagcct
    19801 ttactccatt ttgttttaaa atttcatcaa cgcctttttg atcttttggt aaggcaacaa
    19861 gacctgaatt tttagcttca tctataagac ttgcagcatt taagcttgaa aaagcaacta
    19921 aggatgcgat tagcaatgat tttactttca tttataaact cctattaaag ataaattaaa
    19981 a
//
LOCUS       DARATF010000024        19957 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.024, whole genome shotgun sequence.
ACCESSION   DARATF010000024 DARATF010000000
VERSION     DARATF010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19957
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.024"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..796)
                     /locus_tag="SB502_000661"
     CDS             complement(<1..796)
                     /locus_tag="SB502_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEG0434129.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLR
                     TLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGFDYGTLNPQSFSLRIY
                     QKHEVFSPFKVSLKNFFCKSDLTYNVNFTHLQKLIKEYDFKPLAFKK"
     gene            complement(793..1614)
                     /locus_tag="SB502_000662"
     CDS             complement(793..1614)
                     /locus_tag="SB502_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0434130.1"
                     /translation="MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNG
                     KNIPTFTHPKNQEKVLAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     VENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAATGTPIYAANSGIVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KIDVKIGQKIKKGEFIGLSGATGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            complement(1611..3605)
                     /locus_tag="SB502_000663"
     CDS             complement(1611..3605)
                     /locus_tag="SB502_000663"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEG0434131.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWSNVLEEYRLVSDFKF
                     YYTPRRLVFFHENFADKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMVEKFLKSLSFGKSMRWGANSFEFIRAIRSI
                     ACILNDELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRK
                     EKILEQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSM
                     RENQRYFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQN
                     GLKPEKLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSNHYKSFD
                     MQILKDFIFERLYTFYTVNASFVKAVLSSHNTDLIHINQSVNALIKLSKKDNFNENFA
                     TFKRLANIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDE
                     FFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            complement(3661..4281)
                     /locus_tag="SB502_000664"
     CDS             complement(3661..4281)
                     /locus_tag="SB502_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0434132.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHDIIPYFDKILGVSLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKNLKENEFSNASELKGFLQKYL"
     gene            complement(4278..4610)
                     /locus_tag="SB502_000665"
     CDS             complement(4278..4610)
                     /locus_tag="SB502_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434133.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKNELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            complement(4620..6245)
                     /locus_tag="SB502_000666"
     CDS             complement(4620..6245)
                     /locus_tag="SB502_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEG0434134.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTSLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            complement(6251..6625)
                     /gene="hspR"
                     /locus_tag="SB502_000667"
     CDS             complement(6251..6625)
                     /gene="hspR"
                     /locus_tag="SB502_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HEG0434135.1"
                     /translation="MEQHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNNFDLIFYEKK"
     gene            complement(6641..7534)
                     /locus_tag="SB502_000668"
     CDS             complement(6641..7534)
                     /locus_tag="SB502_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HEG0434136.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNTGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEEILDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEATINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            7734..9152
                     /gene="htrA"
                     /locus_tag="SB502_000669"
     CDS             7734..9152
                     /gene="htrA"
                     /locus_tag="SB502_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HEG0434137.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTATANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDIEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTILALQGDTKKAYKNQEGALITDVQKGSSADEARLKRGDLVTKVNDKVIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGVQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            9228..9902
                     /locus_tag="SB502_000670"
     CDS             9228..9902
                     /locus_tag="SB502_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0434138.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIVSSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            9899..11146
                     /locus_tag="SB502_000671"
     CDS             9899..11146
                     /locus_tag="SB502_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0434139.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLGDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            11239..11313
                     /locus_tag="SB502_000672"
     tRNA            11239..11313
                     /locus_tag="SB502_000672"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11271..11273,aa:Asn,seq:gtt)
     gene            complement(11402..11650)
                     /locus_tag="SB502_000673"
     CDS             complement(11402..11650)
                     /locus_tag="SB502_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEG0434140.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSTIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLKQTK"
     gene            complement(11661..12260)
                     /locus_tag="SB502_000674"
     CDS             complement(11661..12260)
                     /locus_tag="SB502_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEG0434141.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFKLATKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKNIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEYPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGHKFTCKTCKQAIKFYKKYS"
     gene            12408..13073
                     /gene="dccR"
                     /locus_tag="SB502_000675"
     CDS             12408..13073
                     /gene="dccR"
                     /locus_tag="SB502_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HEG0434142.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAREALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            13066..14256
                     /gene="dccS"
                     /locus_tag="SB502_000676"
     CDS             13066..14256
                     /gene="dccS"
                     /locus_tag="SB502_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HEG0434143.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDAKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLAPMSADHYFLRHASNEEVNTNDGLQILIQGEDVGKDLFWIRTKVF
                     GFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     YQNLGDNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(14299..15936)
                     /gene="groL"
                     /locus_tag="SB502_000677"
     CDS             complement(14299..15936)
                     /gene="groL"
                     /locus_tag="SB502_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEG0434144.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKITNLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPTMPDMSGMGGMGGMGGMM"
     gene            complement(15957..16217)
                     /gene="groES"
                     /locus_tag="SB502_000678"
     CDS             complement(15957..16217)
                     /gene="groES"
                     /locus_tag="SB502_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEG0434145.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            16379..18919
                     /locus_tag="SB502_000679"
     CDS             16379..18919
                     /locus_tag="SB502_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434146.1"
                     /translation="MKKIFYGVIAFVVVLLIAIYTILFTSFGNNIVANIAQKKIKESA
                     GLDVNITHFNLRFSNLELQANIANMADFNLKGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNQNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDISKNALSTDFNLSIPSLVKLEK
                     LTKTRLNGSLDVIGQTSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIGLPNTIFS
                     LDAKANAKNSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLTAKAHIIGTQVQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     TGMPNYASGIVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKSLNFVVNSPNLFEGKLQSTFKDNLLLADLNGVDLSSLAQGLD
                     FMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKLNLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
     gene            18928..19539
                     /locus_tag="SB502_000680"
     CDS             18928..19539
                     /locus_tag="SB502_000680"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEG0434147.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGVCLSVT
                     KLYEAGFEVELSRESRTHMAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFHISLPKEAMKFMAEKGSIAVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            19503..>19957
                     /locus_tag="SB502_000681"
     CDS             19503..>19957
                     /locus_tag="SB502_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEG0434148.1"
                     /translation="MGRSRKNFLSLLENDKVGIFCAFDKDYNVFRAKIHNENLFSHLG
                     FKDIEKCVFMDQIHSHKVIIYDENLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKN"
BASE COUNT         6774 a         2856 c         3077 g         7250 t
ORIGIN      
        1 gttttttaaa agctaaaggt ttaaaatcat attctttgat gagtttttga agatgagtaa
       61 aattgacatt ataagttaga tcgcttttgc agaaaaaatt ttttaaagat actttaaaag
      121 ggctaaaaac ttcgtgcttt tgatagattc ttaagctaaa actttgtgga tttaaagttc
      181 catagtcaaa tcccgcaaat ataaatctct cacaagtttg gtttaaatct ttaaaaaaat
      241 tttcaagctc taaactgagt tcaccttttt taagatttaa agctttgcat tttgtgatta
      301 aattttcatc catattttta aaaataagtt taaaattttc tacaaatgcc attttatcat
      361 gatctataag ttcgcaagca aaactatcaa aaagttcatt gcaaaagaaa aaagcgttct
      421 taaaatggca ttctttaaga ctatttttgt gagtaaattc cactccttct aaagtctttt
      481 tttgtaaagt tcttaatttt tcatgcggtt ctatgacgaa aaaagaaatt tgagaaaaaa
      541 tttcaggtct taattcaagc aaagcggcta aaaaatcacg acttaaatat ccttcattag
      601 cgcctatttc tacaagttct aaagggagtt gtaaaatttt tttatctatt aaatttaaaa
      661 aatgcttggc taaaagtgtg ccaaaaagat ttcctacgct tacagcagta aaaaaatctc
      721 cgttttttcc tatacttaca gcatttttat aatagctttc atggagccaa gcatggaaaa
      781 agtcactaaa tttcattgaa aaatagcatt aaatttggat acaaaatcca aaggatcaac
      841 ttgtttgcct ccagctaaaa ttccaaaatg caaatgcggc ccacttaccc tacctgtagc
      901 cccgctaagt cctataaatt cacctttttt tatcttttgt cctattttaa catcgatttt
      961 agaaagatga taatattgtg aataaattcc aaaaccatga tcaatgacta ctgaatttcc
     1021 tgcgaaataa cgatcttttg caatttttac tatgcctgag ttggctgcat aaataggtgt
     1081 tcctgtggca gctctaaagt ccgttccgct atgataactt gctacttttt cattaaaagt
     1141 tcttgctttg ccaaaatcac ttgtgataaa agaatttaaa ggtatattaa aagcaccgtt
     1201 aaataaagct tttggagtat aagaactata aatcgcattg gcttctttta attctttagt
     1261 gatgcgttct tgtatggttt ttggtggaaa aatctttttg ttttcaactt gcaatttttc
     1321 acttttataa ttaccttcta aagtttttat gaaaatttct tcttttttat ctttataaaa
     1381 tgcgataagt tttgtatttt gcgggggatt tttgtaaggt aaggaaaaaa tagctagaac
     1441 tttttcttga tttttaggat gtgtaaaagt gggaatattt ttaccattat tttttaaaga
     1501 taaaaaatct ttcttatcta gctccaaaaa taaagcttga cctttgatga gttctaaatt
     1561 ttgagctcca aaaagccaaa gagtaaggct taaaaaaagc cataaggctt tcataggctt
     1621 aactctttaa gatcggcgat ttttaaaaac tccgcataaa tttcataaac caaagcttgg
     1681 cgattatttt taagtttttc atcttcagca ttaatcatca cttgattaaa aaactcatca
     1741 ataaaaggct taagtgcaaa aagattttca agtttttctt gtaaagagtt ggctttagtt
     1801 ttttcttgaa aagctttgta aagtttactt tctgcttctt gaacaaaaag actttcatca
     1861 actttatgag gatttttagt ggcgatattg gctagtcttt taaaggttgc aaaattttca
     1921 ttaaaattat cttttttgct aagttttata agagcattta cgctttgatt gatatggata
     1981 agatctgtat tgtgtgagct taaaaccgct tttacaaaag aagcattgac tgtataaaaa
     2041 gtataaagtc tttcaaaaat aaaatctttt aaaatttgca tatcaaagct tttataatga
     2101 tttgaaagtt tttctaataa aatttggata tcaaattctt tatttaaatt taaagcaatt
     2161 ttaatgatcc cattggcagc tcttcttaag gcataaggat cctttgttcc gcttggaatt
     2221 tttcctatgc taaaaagtcc tataagggta tcaagcttgt ttgcaagggc tactatgctt
     2281 gaaaattctg tacttggaag tggagcttgt tcggaattag gaagatattg ttctttgatg
     2341 gctaagcaaa tttgataatc taagcccatt ttttgcgcat aataacttcc cataatgcct
     2401 tgcaaatcag taaattcata aaccatttgt gtggctaagt ctgctttggc gtattttagt
     2461 gctgtgctga tattttcgat tttatcatta tggagcattt gacataaaat ttcagcaatt
     2521 ttaatctctc ttaaactttt atcttgcatt gtgcctaaac cttcaagata ggtcattttg
     2581 gcaagttttt caggttttaa gccattttgt aaatcatttt gataaaaaaa cattgcatcg
     2641 ctaagtcttg cacgcaaaac tctttcattt ccatgtatga tttttgaata atccttacat
     2701 actgcattac ttactactat aaaatgatta cttaagcctt tatcgttaaa aactgcaaaa
     2761 taacgttgat tttctctcat tgaagtgatg attacttcgc taggaatttc taaaaattct
     2821 tcttcaaaac ttcctaaaag tgcattagga tattctgtga tagcaactac ttcagctaaa
     2881 agctcttcat cttctccaat ttgtatattt ttttgacttt ctatgagttt aaattgctca
     2941 agtatttttt cctttctttt gattggatca aggatgatat agtttttttc tagtagttca
     3001 aaatattctt ttgcattgtt aaaatcttgc aaatcataac ttacgcttct gtgaatgaaa
     3061 gtttttttag tactttttac tccatagctt tgaaaattaa caagttcatc atttaaaatg
     3121 caagctatag aacggatcgc acggatgaat tcaaaagaat ttgcacccca gcgcatactt
     3181 ttgccaaaac taagactttt tagaaatttt tctaccattt ctcctaaaat ttcttgactt
     3241 tgcaaacctt taatagcttt ttgatggtac aaaacttcct tgcctttgat ttctttaaaa
     3301 gagagttcat tttcactgat ccttgctttt tgcaggaagc tttgtcccgc aggagttaaa
     3361 actccatctt tataagcaac atttttaggt gctcctataa attcagcaaa gctatcttct
     3421 tgtttgtctg caaaattttc atgaaaaaaa actaaacgac gcggagtata ataaaattta
     3481 aaatcactta ccaagcggta ttcttctaaa acattgctcc attttttttc tatattagct
     3541 aattctttta gcaaaggaat agcaggtaat tcttctgtac caatttctat taataattca
     3601 ctcataattt actcttttta aaatttattt ctaattttaa ctaaaatttc attaaaaaac
     3661 ttataaatac ttttgcaaaa agcctttaag ttcactagcg ttgctaaatt cattttcttt
     3721 taaatttttt tgataccatt tggcatgaaa ataaggcaaa ttagcatttt tagcacattc
     3781 tttatctttt tgactatctc ctataaaaac gcttgtttta tatggagcct cgctttttaa
     3841 aagctctagc atcataggat gaggtttggg ttctatgcct aaacttacgc ctaaaatttt
     3901 atcaaaataa ggaatgatat cgtgtttttt aagtatgttt gaaagtgagc tttgcggggc
     3961 gttagtagca atagctaaaa aacaattttt gctttttaaa aattctaaaa gttcttttac
     4021 tccttcaaaa agcaccacgc tttgttcata gtgcttgaca aaatattttt catagccttc
     4081 tttaaaacta gaatgatgga aattttctat attgtaaagt tcttttgccc agtcaatatt
     4141 gggagtattg atggtttgca taatgatttc tcttgaaagt ggggctaggt ttaaatcctg
     4201 tcttatttca ttgactgcac aagaaatggc atttgcacta tcgattaaag ttccatccat
     4261 atcaaaaaat acattaatca ttcataatcc tttaaataat ttttatgttt ttcttttttc
     4321 tcaccttgtt ttttttgctt atctaaagca ttggcaagat ttaaaagctc gtttttttct
     4381 ttggaaaaat ctaaacaagc attgacaaaa aattcaagat tttttgcata ggttgagtta
     4441 agatttaccg cgggattttt ttcaaaaaat ttagcatttt ttaacattct ttcttcaaat
     4501 ttagttttat caaaatcttc ttttttaagt gcagatatag cgccattgaa aaatttttca
     4561 agatttctta ggtattttac gcgtaaggct ttttcttcat tttttgtcaa aattcttcct
     4621 taggtatttt tgtgaatgcg gcattctagc gcttcttgaa ctaaatttct agcgattact
     4681 ttttcagagc gaatgatgcg tatattttca tctatgctag aaaaaagcat cttttttaaa
     4741 gttccattta catgaatgat ggtgtctata ggttttggat aattagctag cacttgacat
     4801 aaaatttcaa gtttagcttc atttgtaact gtgataatag ctacggcaca ttcttctata
     4861 ttggcaattt ttaaggtttc ttcttgagca gcattggcaa aaacgacatt ttcacctcga
     4921 ctaactccaa gttctactaa atttaaatca ctttctaaaa caagataagg tacgcctgtg
     4981 tttttgattt tttgtacgac ttcttgtcct aagcgtccat agccaaaaac aacaagatga
     5041 tttttcagct tgatattgct gtcaatattt tgcacagcgt tggtattaag tgctatatct
     5101 tctacaacat tggtaatttt tcttatattg tttaaaataa aaggcgtgat aatcatggtt
     5161 aaaatagaaa caacaattaa aatttgtgaa gttttgatat caagcatatt ttttgcttgt
     5221 aaaagagaaa aaattgctag ggcgaattcg ccaatttgag ctatggcaaa agctgtttta
     5281 agcgctactc tttttttggt gtaaagaaat aaaaagccaa aaactatgcc aaattttaaa
     5341 gccattacaa gaagggttaa aactatgatt aaaaaccaat tttgtgccac tacatcaagt
     5401 tgaatttgca tgcctacagt tatgaaaaaa agccctaaaa gcaaatctct aaatgggatt
     5461 aagtccgctt ctattttgtg tttatatttt gtttctgcta tcaaagcacc tgctataaaa
     5521 gcacccaaag aataagaaaa tccaaaataa tttgctaaaa aacttgctcc aataaccata
     5581 aataaaacag tactaataaa aatttcctga gaagaagtgt ggataatgag tctaaaaatt
     5641 ctatccacta gatatttacc tatgaaaaat aataaagtga ttaaaataag tgctgaaatt
     5701 aaactggtaa aaaggagttt ttctatgttt tgattgttgg atgaaaaaat atctacaagc
     5761 aaaagcaaag gaataacggc tatatcttga aaaagcaaaa ttcccaatgc ttttctgcca
     5821 tattgctcat ttatatcgcc attatcattt aaaattttaa gcaccactgc ggttgaagaa
     5881 agcgctagtg caaagcctac tatggtagcg cttttatctc caagtcctaa aattcctata
     5941 gcaagtagca taaaaacaaa gccacaagta agcatctgta aagagccgtt taaaaaaact
     6001 tcttgtttca ttgccattaa atgcttaaaa gaaaattcaa gccctatggt aaacattaaa
     6061 aacactatac caaattcggc tatatgagtg atttcgcctt tgccacttaa atgataaatt
     6121 tcagaaatga tttctccagc agctatatat ccaatgatag ttggaatttc aaatttttta
     6181 aatatgacat ttaaaactat agctatagca acggtgatta aaaaaatttc taaaaaatta
     6241 tccattattt ttattttttc tcataaaaaa tcaaatcaaa gttattttta tgcttaacaa
     6301 cggctttact agccgcttct ttatcttgtt gtttgcttaa ttctaagcgt agttcatcaa
     6361 ttaaattttc aaattcgtga agttggtttt tcaattttaa gataacatct actccagcaa
     6421 gattgattcc catgtctctt gttaaacgca atataagttt aatacggtca atatctcttt
     6481 gagaataaag tcttattttg ccatcggttc tacttggctc tatcaatcct tctctttcgt
     6541 attgccttaa ggtttgtgga tgtatgctta aaactttagc cacaacactg attaaatata
     6601 caggttcatc ataatgctgt tccatatttt attcctttct ttaaggtaat ttttctttta
     6661 agagttctat aaatttttca tcaagggtat ctaaatttgg caaaacaaca tttaaaatca
     6721 aatacatatc cccataaata tcactttttc tattttgcac accatagcct tttaaacgaa
     6781 ttttttggtt attttttgaa ttaggcgtta tgttaattgt tgcttcttcc ttgccttctt
     6841 tgagtgtttt tatatttatt tttccaccaa aaagtgcagt ttttaaagaa atatcaacct
     6901 tttgatataa atcatcatct tctcttgtgt aaataggact ttcttctatt tttacaataa
     6961 tgattaaatc tcctctagct ccatttctgc tttgttttcc tttagagcga attcttagtt
     7021 tctcgccttc ttttatacca tgtggaattt taaatttaat ggtttcgcct tgaaaattaa
     7081 aactatgttc cccgccttta acagcttttt cgaaaggaat gtgaagctct agattgctgt
     7141 ctaaaatttc ttcttcaaaa cctccaaatc ctccaaaacc actgctaaag ccttttgaag
     7201 aaaagccgtt aaaaccccct cttgagcgtc caccaaaacc tcctccaaag agatctttta
     7261 aaatatcgtc caaatttacc ccaccagtat ttcttgaaaa atcatgaaaa ctttgtccac
     7321 caaacataga atcgccgtat tggtcatact gagctcgttt tttttcgtca cttaaaattt
     7381 cataagcagc attaatttct ttaaattttt cttcagcacc tttttctttg ttgatatcag
     7441 gatgatattt tctagctagg cgacggtaag ctttttttat ttcatctgcg ctagcgtttt
     7501 tgctaactcc aagagtttcg tataaactat tcatgttata tttccttaaa aattttcact
     7561 tgattatata gaggattaaa ttataacata aactttagcc taagtcaatc aagttttata
     7621 aatttttatc actcaaggtt ttatttacaa ttttgtaaat tttcggtttt atactatgaa
     7681 gacagtaaaa tattttacga gataatttat ctttaagaac aaaaggaaat gaaatgaaaa
     7741 agattttttt atcattaagt ttagcaagtg ctttatttgc tgcaagtatt aattttaacg
     7801 aatcgactgc aacggctaat cgtgtgaatc ctgctgctgg aaatgcagtg ctttcttatc
     7861 atgattctat taaagatgca aaaaaatcag tggttaatat ttccacctca aaaactatta
     7921 caagagcaaa tcgtccaagc cctttggatg atttttttaa tgatccttat tttaaacaat
     7981 tttttgattt tgattttcct caaagaaaag gaaaaaatga taaagaagtg gtgagttctt
     8041 tgggatcagg ggtgattatt tcaaaagatg gttatatagt aacaaataat cacgttgtag
     8101 atgatgctga tacgattaca gtgaatttac caggaagcga catagaatat aaagcaaaac
     8161 ttataggtaa agatccaaaa acagatttgg ctgttataaa aatagaggct aataatcttt
     8221 cagctattac ttttacaaat tctgatgatt taatggaagg agatgttgtt tttgcacttg
     8281 gaaatccttt tggagttggt tttagtgtta caagcgggat aatatctgct ttaaataaag
     8341 acaatatagg tttaaatcaa tatgaaaatt ttatacaaac agatgcttct atcaatccag
     8401 gaaattcagg tggagctttg gtggatagtc gcggatattt agtaggtatt aattcagcta
     8461 ttctttctcg tggtggtgga aataacggca taggttttgc cataccttca aatatggtta
     8521 aagatatagc taaaaaactt attgaaaaag gcaagattga tagaggattt ttaggtgtga
     8581 ctattttagc tttgcaaggt gatactaaaa aagcttacaa aaatcaagaa ggagctttaa
     8641 tcactgatgt tcaaaaaggt tcaagtgctg atgaagcaag gcttaagcgt ggagatttag
     8701 ttactaaagt taatgataag gttataaaaa gtcctattga tcttaaaaat tatataggaa
     8761 ctttagagat tggtcaaaaa atttcattaa gttacgaaag agatggagaa aataagcaag
     8821 caagttttat tcttaaaggt gaaaaagaaa atcctaaagg cgtacaaagc gatttgattg
     8881 atggtttgag tttgagaaat ttagatccaa gacttaagga tcgtttgcaa attccaaaag
     8941 atgttaatgg tgttttggtt gatagtgtta aagaaaagag caaaggaaaa aattctggtt
     9001 tccaagaggg tgatattatc ataggtgttg gacaaagtga aattaaaaat ttaaaagatt
     9061 tagaacaagc tttaaaacaa gttaataaaa aagaatttac caaagtttgg gtatatcgca
     9121 atggttttgc gactttgctt gtgcttaaat aaaaataacg gaaggatttt cctttcgtta
     9181 taaattttag tttaaaatta aaattaagtt taaaataaag gaaaactatg acaaatattc
     9241 ttatgataga agatgattta gaattagcag aaattacagc tgaatatttg gaaaaatttg
     9301 atatgaaagt tgatatagct catgaacctt atataggtct ttctaagctc gcattaaaag
     9361 aatatcagct tatcatttta gacctttctt tgccagggct tgatgggctt gaagtgtgtg
     9421 aagagattcg taaaaagtat gatacgccta ttattgtttc aagcgcaaga catgatatta
     9481 cagataaggt taatgcttta gagcttggag cagatgatta cctaccaaaa ccttataatc
     9541 caaaagaatt acaagcacgc attaaaagtc atttaagacg tatttcaaat acaaaaagcg
     9601 ccatagcaaa aagtgtaaaa gatcttgttt atgatcaata taagcatatt attaccatga
     9661 aaggacaaga gcttacttta actaatgctg aatttgatat tttaagctat ttgattaaaa
     9721 aagagggtgg agtggtaagt cgtgaagagc ttgtttataa ttgttcttct attagtgagg
     9781 attctagtaa taaaagtata gatgttatta tcagtagaat tcgtcaaaag atgggagatg
     9841 atccaaaaac tccaaaatat attcactcta tacgtggaat aggttataag cttactcaat
     9901 gaataaatct tcgatttttt atactataac ttttattttt atttttgctg gggttagtgt
     9961 tatacttggc tttttgtggc ttatagaata tgatcagcaa aattatacta gagaattaaa
    10021 cacaaaatat tctttgatag ctaatgcaag gctcttaaat tttgcaggag ttatcagtga
    10081 aaaagaattt gaagagcaga caaaaaatta taataaaatg gatgagataa cagaagcaaa
    10141 gcagatccgt aaaattcttt ttagaggtga tgttttagct agggttgagg ttaacaatgg
    10201 cttaatcgag attatttctt ataatagaca ggtgtattta aatattattt atgatggaaa
    10261 ggtttatctt tataaggatc aagattatca aacctatagg tattttatta tcaaagctat
    10321 agctgtagct gtgatttgta ttcttgtatt gctttatatt tatatattta aaaaattaaa
    10381 accacttaaa agacttaaaa aacaaattga taaatttgcc caaggaaagc ttggtgatat
    10441 agaagatgta agcactgggg tggatgaaat ttcacaagta agtgaagctt tttatcaagc
    10501 cattgttcaa attcgaaagt taaaccaatc tcgtcagttt tttttaagaa atattatgca
    10561 tgaactcaaa actcctatta ctaaagggct cttaacttta gaaatgatag aagataataa
    10621 atataaagag cgcttaaatg gggtttttac tagacttgaa attttaatta atgaatttgc
    10681 tgctattgag caaattactt caggggctgc ttttataaat agaaaaaaat acaatatttt
    10741 agatgtttta gatgaagcca aagaaattgc aatgcgagat gatagcaata tacgtatttt
    10801 tatggaagaa agtttttttg taaatgtgga ttttaaactt tttactacgg cgattaaaaa
    10861 tatgatagat aatggtatta aacattctga agatgggttt gtgcaaattg atattataga
    10921 tgattatatt tgttttaaaa atcgtggtcc tgagcttaac aatactttag aatactatac
    10981 tcaagctttt actcaaggat caaaacaaaa atcaagtttt ggattagggc tttatattgt
    11041 aaatactatt ttagaaacac atggaatgaa gcttgattat ttatatgaag atggggtaaa
    11101 tttgttttat tttagaaatt taaaaagtgt tattgttaag gagtaaatta atttttttac
    11161 ataaaaaatg catttttgtg aaaaaatcct tgacaaagtt ttttaatttc actataatca
    11221 cattttactt ttaaatattc cggattagct cagcggtaga gtagtcggct gttaaccgat
    11281 tggtcgtagg ttcgaatcct acatccggag ccactttttt aactccattt ttaatattca
    11341 taaatgtatt ttaatataaa aaaataataa gtctttatca caaaaaattg tgataaagtt
    11401 tttattttgt ttgtttaaga tttttgacaa ttttatctat ttttttactc gccttttgat
    11461 aatccccatc tttaagttct tctagggcat taacagcaaa agaaaaatct tcaacttcat
    11521 taagataagc ctctatagct tcttttacta tggttgattt tggtttagaa agatttttac
    11581 ttaaattatc caaacgctcc ttaagctcta aaggcattct aaaagaataa gtttttacat
    11641 tgcgtttcat tttatcctcc ttaagaatat tttttgtaaa attttatagc ttgtttacaa
    11701 gttttacaag taaatttatg accttgtaat tctatttttt gatgaatgct ataaggaaca
    11761 tcgtgaattt taccaggaca attacaggta taaagataaa attgtggata ctcattatct
    11821 tcatcttctg ctgcttcaaa gctaacatcg ccaccatcat ctgtagacaa agaagaactt
    11881 ctccattttt caactttcat gtcttcatat agtatgtgtt ctaaaagcca ctttttagcc
    11941 actatataaa gtttttcttt aagatcattg gttgatttga tatttttgat taaattaatc
    12001 atggtttgga tgatttcttt atgtattttt cgatgttctt ctaaatttgg atagcctatt
    12061 agctgcatgt atttttcttc atcattaaag tgatctttca tataattaaa aaattcagcc
    12121 aaaagttctt tgacttcatt tttacttaca gatctatctg atacaacttc aacttttgta
    12181 gcaagtttaa aaagcttttt atgctgctca tcaattttag cattgtgcac actatagctg
    12241 ttatcccatt ttggaagcat tttaactcct taaggaaaaa tttatttgta tgaaaggatt
    12301 atagataaaa ataaattaaa taaaaatgaa attttattaa ataattgata agaattttga
    12361 tacaatgata tatatttaag agatttgaag ttagaaagat ttaaattatg gctgctaaaa
    12421 ttttactttt agaagatgat ttgagcttga gtgagatcat tgaagagttt ttaaacgatg
    12481 aaggatatga agtattttta tgcgataatg cacgagaagc tttagatatg gcttatgaaa
    12541 gatattttga tctttggatt ttagatgtaa aagttccttt aggagatgga ttttcattac
    12601 ttaaagaatt aagaaaaagc ggaaagcaaa ctccagcaat tttcatgact tctttaaaca
    12661 caacaaacga tttaaaacaa ggctttgacg caggttgtga tgattatata aaaaaacctt
    12721 ttgaacttgc cgagttatct atcagggtta aagctttgct taaaagagct ttttcacata
    12781 aaaatgaaga ttttgaagat ttaggagatg gatttagatt tgaatttact acacaaattc
    12841 tttaccataa taataaagcc ttgactttac cgagtaaaga aattaagctt ttgtctttat
    12901 tacttaaaaa taaaaacaac tttttaagca cagagagaat ttttgaagaa ctctgggatt
    12961 atgatgagga gcctagtgag ctaagtttaa gagcttatgt aaaaaattta cgtaaaattt
    13021 taggaaaaga aaaaattata aatcaaagag gcaggggata ttgctatggc taaaaaagtc
    13081 attaggcaaa ttttattaat ctacctaaca actacaggta tttttttaac tatttttttt
    13141 gcattatggt atcaaaaatt atatgaagaa ttagttgttt tgaagggtgc cactttgaga
    13201 gaaaatcata gaaacattgt tataagcatc ttaaattctc gttttacccc tatagatata
    13261 agtgcaaaaa atattgctca aagcacagca ctaaaatttg ctatatttga tgctaaaaag
    13321 attgttttta gtaatataga ttttgattta agaaaggcaa agatagagct taaaggtaga
    13381 ggtatttgtg ataataaggt ttttttcctt gctcctatga gtgcagatca ttatttttta
    13441 agacatgcta gcaatgaaga agtaaatact aacgatggtt tgcaaatttt aatacagggt
    13501 gaagatgttg gcaaagatct tttttggatt agaacgaaag tttttggttt tgctattatg
    13561 gctttttgca tattgggttt aatatcttat attttagtaa aaattgctct aaagcctttg
    13621 gaggataaaa tcagcacact aaatcgtttt attaaagatt caactcatga actcaatacc
    13681 ccattaagtg ttattttgat gagtatagaa caacttgagt atcaaaattt aggagataat
    13741 gctaaattta caaggattaa gcttgctgca aaaagtttgt ctcaagtgta ttctgatctt
    13801 gttttttata atttccctaa taccttagaa acagaaaaac aaaaatttga tttaagaata
    13861 ctacttgaag aaagattgga atattttaaa gtattttttg agcaaaaaaa aattacacta
    13921 aagcttgatt taaaccaagc aaatattttt gctcctaaaa gtcaaatttc taaattgatt
    13981 gataatctta taagcaatgc tattaaatac aataaaaaag gtggagtaat ttctataatt
    14041 ttaaaagcca attttttaag tattgcggat acaggttgtg gaatttcaaa gtcaaattta
    14101 aatcatattt ttgatagata tacaagattt aataccgatc aaggaggatt tggtataggg
    14161 ctttctttgg taaaaaaagt ttgtgatgat aatgatatta agattatttg cgaatctgta
    14221 gaaaatcaag ggagtgtttt taaattaaat tggtaatcag caaggaaaat ccttgctgat
    14281 aagaggttag agcagatatt acatcattcc gcccatgcca cccattcctc ccataccgct
    14341 catatctggc atagtaggtt tatcttcttt aatttcacta attgttgctt ctgtggttaa
    14401 aagcatacta gctacagaaa ctgcattgag taaagctact ctttctactt taacaggatc
    14461 gataattcca ctttcaagca tattaacata ttcacctttt gcagcatcaa atcctgtgtt
    14521 ttcatcttta gcattttcta cgctatttac aaccacacct gcatcaaatc ctgcattttc
    14581 agcaatttgt cttaaaggtg ctcttaaagc tctttcaacg atagctgcgc caattgcttc
    14641 atcaccctgt agatcaagtt tgattttagc ttttgctttg ataagcgctg caccaccacc
    14701 aattactata ccttcttcaa ctgctgcttt agtagcgctt aaagcatcgt caacgcgatc
    14761 ttttttctct ttcatttcag tttcagttgc tgcacctact ttaataactg caacaccacc
    14821 acttaatttt gcaagtcttt cttgtaattt ttctctgtca taatctgaag ttgtttcagc
    14881 aatttgtgct ttgatttgat tgactctcgc atcaatattt gctttttcgc ctgcaccatt
    14941 tactatggtt gtattgtctt tatcgatgat tacactagaa gcttgtccaa gatcttgtat
    15001 agtcgcactt tcaagagttc ttccaagttc ttcagaaatc acttctccac ctgttaaaat
    15061 cgctatatct tcaagcatag cttttcttct atcgccaaaa cctggagctt tcactgctga
    15121 aatattaaga acaccgcgaa gtttatttac aaccaaagtt gcaagcgctt caccttcaat
    15181 atcttcagcg ataattaaaa gtggtttgcc tgttttttga atttgttcta aaaccggtaa
    15241 taaatctttt aaatttgtaa tttttttatc aaaaagcagg atataagggc ttgaaagctc
    15301 tactgtcatt ttttctgcat tagtgataaa ataagggctt aaataacctc tgtcaaattg
    15361 cataccttca actacattta attcatcatt gattgatttt gcctcttcaa cagtgataac
    15421 accatctttg cccacttttt ccatagcatc agcgattaaa tttccgattt tttcatcaga
    15481 gttggctgag attgtagcaa cttgtgcaat ttctttttta tcttttactt cgcgagaaag
    15541 ttttttaagt tctgctacta tagcttcgca agctttatcc ataccgcgtt ttacctcgat
    15601 aggatttgca cctgctgtga tatttcttaa accttctttg aaaattgcat gagctaaaac
    15661 cgttgcagta gttgttccat cgcctgcttg atcagctgtt ttactcgcta cttctcttac
    15721 gagtgaagca cccatatttt caagactatc tttaagctct acttctttag caacacttac
    15781 gccatcttta gtaatgcttg gagcaccaaa gcttttttgg attaaaacat tgcgtcctct
    15841 tggccccata gttactttta ccgcgtcatt aagtttttta acgccctcat aaagtttatt
    15901 tcttgcttca tctgaaaaaa taatttcttt tgccattttt tatccttttt tataaattat
    15961 tttaaaattc ctaagatatc atctaaattt aaaactaaat attcattatt atcaagttta
    16021 atttctgttc caccgtattt agcaaacacg attttatcac catttgcaat atcagtgatt
    16081 tctttactta ctgctactac ttcacccatt aaaggctttt ctttagcatt atctggtata
    16141 attatgcctg aggctgttgt tttagtttct tctacgcgtt taactagaac acgctttcct
    16201 aaaggttgaa aattcatttt tgtccatcct taaaaatatt gattttagca ctcttttatt
    16261 tagagtgata atatcatact ataaaaaatg aattttgtca atactttaaa ttaaaatatt
    16321 tataaaagtt tagttttgta gactaaagtt attttataaa ataaactaaa ggataaaaat
    16381 gaaaaagatt ttttatggag ttatagcttt tgttgttgtg cttttgattg ctatttatac
    16441 catacttttc acaagttttg gtaataatat agtggcaaat atagcgcaaa aaaagattaa
    16501 agaaagtgcg ggattagatg taaatatcac gcattttaat ttacgttttt caaatcttga
    16561 attgcaagca aatatcgcaa atatggcaga ttttaatctt aagggagctt tgagtccttt
    16621 taagcttgga tttgatcttg actatcttat ttctttaaat caaaattatg ctaaaaattt
    16681 aggtttaaat ttaaatcaaa acctttcttt tggtggtaag attcaaggta aagcaagtga
    16741 ttttacttta gatggaaagg gttatttact aggttcaaat gtacttttaa atgcaagaat
    16801 gtataattac agccctattg ctttaaattt agatgcgcaa aatcttaaga tagaagaaat
    16861 acttcatctt ttatcttacc ctagttacgc taaaggtttt ttaaatgctc aagcaaaaat
    16921 ttcagcacag aatttaaaac ctgatggaaa tatcatcata aaacttgata caagttatat
    16981 aaactatgag gcgataaaaa aagatttttc tttagacttg cctttaaatt ctaatcctaa
    17041 agcagaaatt ttggccaatg ttaaagaaga taagatttat gctgtaagta aaatttacaa
    17101 tgattatctt aacttacaaa cccaaaaaac tctttatgat attagcaaga atgctttaag
    17161 cactgatttt aatttaagta ttccttctct tgtaaagctt gaaaaactta caaaaactag
    17221 actaaatggt agtttggatg tgataggtca aacaagtgtt gtaaataatg ccttatcaag
    17281 tttaaatgct caagttatcg gacttggtgg agaggtaaag gcaagtttga aaaataataa
    17341 aatttttgca gatattaatg aagcaagttt ggaaaaatta ttagctcttg caggatatgg
    17401 agctttagtt tctggaaatt taaatgctaa acttttaaat gcggatttgg atttttctaa
    17461 tttcgatctt gaggcaaaaa taaacaatgc aaagattaac accaatgagc ttaaaaaaat
    17521 tgctaaaata ggacttccaa atacaatttt tagtcttgat gctaaagcaa atgcaaaaaa
    17581 tagtaatatt tcttacaatg ctttacttgc ttcaaattta cttaatatca aaaaacttca
    17641 aggaacttat aatttaaaaa atagtgagtt aaatacagat ttaaatgctt ttattgatga
    17701 cttgtctcag tttagtgcta tagcaggaca aaaattacaa ggtaaggcag atcttactgc
    17761 aaaagctcat attataggca ctcaagtaca aaatttaaat gcaaatgcaa atttggcaga
    17821 tggtgtaatc aaggctgatt caaatggtaa aaaacttgat ttaaacattg ataaacttga
    17881 tttatctaaa ctttttgtta taacaggtat gccaaattat gccagtggga ttgttaatgc
    17941 aaaagttaat ttagataata tcgattttaa caatcttaat ggtaaagcaa atttagaagc
    18001 taagggtatt ttaaatgctg caactttaag taaaatttta aataaaaatt ttccaaacaa
    18061 tacaagttat gatttaaata ccaaaattaa ttttaaaaac aatatcgctc aatttgattc
    18121 tgttttaaat tcatctttag ctgatcttac aaaactacaa ggaagttttg atataagtaa
    18181 gatgctttta aattcggatt ttaatttaaa gataaatgat ttttcaaaac taggcttttt
    18241 gttagataga aaacttaaag gtaaggcaga atttaatgga aaggtaggtt ttgataagag
    18301 tttaaatttt gttgtaaata gtccaaattt atttgaagga aaacttcaaa gcacatttaa
    18361 agataacctt ttacttgctg atttaaacgg agtggattta agtagtctag ctcagggttt
    18421 ggattttatg gatatttatc aaggtaaggc ggacatgaag gcaaattaca atcttttaag
    18481 cgaagaaggc gaggttaatt tggatatgaa agagggtaaa ttaaaaccaa atcttattac
    18541 caatgcttta aaaattttaa cactaaaaga tattaccaat gatgtttatc gcactgctaa
    18601 tgctaaagct ttgattaaaa aagaaaatat caagcttaat cttaatatgc aagcagatcg
    18661 ttcttatatt ttagtacaat caggagcttt aaattctaaa agcggggctt taaatttgcc
    18721 ttttgatatt aaactcgata gagctaattt taaaggaagt attacaggaa ctacggaaaa
    18781 tcctaaagta aatttaaatg caggaagcgt gttaaattct attaaaaatg tagtgggtgg
    18841 cggtgtgagt gacggtgcta aaagtactgg cgataaagtt gataaagcgg tgaataaatt
    18901 attaaataag attttttaag gtaaaaaatg tttaatggac tcataagaga aattgctaaa
    18961 gttcaatctt atcaaaacaa tactttaagc ttaaaagcaa aatatcgccc aaatcttggc
    19021 gatagcatag ccgtaaatgg agtttgttta agtgtaacaa aactttatga agcgggtttt
    19081 gaagtggagc tttctcgtga aagtcgcact catatggcta tagagaattt aaaagataaa
    19141 gttcatatag aacctgcttt aagatatggc gatagaatcg atggacatct tatgcaagga
    19201 catattgatt ttatcggcac acttgaaaag attcaaaaag atgaaaatgg agtagatttt
    19261 catatatctt tacccaaaga agctatgaaa tttatggcag aaaaaggaag tatagctgtt
    19321 gatggagtaa gtcttactat caatgaaatt ttaaaaaatg gtattaggct tactattatt
    19381 cctattacct ttaaagaaac gctttttaaa gactatcaag taggtagaaa aatcaatata
    19441 gaaagtgatt tacttgctcg ttatatttat gcacaattac aaggtaaaaa caaaggatta
    19501 tcatgggaag aagtcgaaag aatttcttat ctttattaga aaatgataaa gtcggtattt
    19561 tttgtgcttt tgataaggat tataatgttt ttagagctaa aattcataat gagaatttat
    19621 tttctcattt aggttttaaa gatattgaaa aatgtgtttt tatggatcaa attcattctc
    19681 ataaagttat catttatgat gaaaatttaa aaaatctcag ttgtgatgga cttataagca
    19741 aggaaaaaaa tatcgctctt tgtgttttaa gtgcggattg tctgcctttg attttatatc
    19801 atgaaagtgg tattatagca gctttgcatt caggtagaaa aggaagcttt gaaaatatcc
    19861 taaaagaatg tgttgatcaa attactatgc aaaattcaca tttagataag aataaatttc
    19921 atctttttat cctgcctgga atttgtgcta aaaatta
//
LOCUS       DARATF010000025        19362 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.025, whole genome shotgun sequence.
ACCESSION   DARATF010000025 DARATF010000000
VERSION     DARATF010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19362
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.025"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            3..749
                     /locus_tag="SB502_000682"
     CDS             3..749
                     /locus_tag="SB502_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0434149.1"
                     /translation="MLSIALVALVGLFLGACSDSKNKESNASVELKVGTAPNYKPFNY
                     KENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATDERR
                     QSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQVQS
                     NKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDKNKQ
                     KDIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(773..1411)
                     /locus_tag="SB502_000683"
     CDS             complement(773..1411)
                     /locus_tag="SB502_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEG0434150.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1408..2397)
                     /locus_tag="SB502_000684"
     CDS             complement(1408..2397)
                     /locus_tag="SB502_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434151.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDRIILMNEGKIIQNSNA
                     NNLYFLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2401..3180)
                     /locus_tag="SB502_000685"
     CDS             complement(2401..3180)
                     /locus_tag="SB502_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434152.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVSPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNMGGTAWILIFTYFTIALPFIYRALDNAMSNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3181..4020)
                     /locus_tag="SB502_000686"
     CDS             complement(3181..4020)
                     /locus_tag="SB502_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEG0434153.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFILAPSKICNFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLAITFIANFLSKKYNF
                     KVL"
     gene            complement(4017..4827)
                     /locus_tag="SB502_000687"
                     /pseudo
     CDS             complement(4017..4827)
                     /locus_tag="SB502_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
     gene            complement(4824..6148)
                     /locus_tag="SB502_000688"
                     /pseudo
     CDS             complement(4824..6148)
                     /locus_tag="SB502_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
     gene            complement(6159..7205)
                     /locus_tag="SB502_000689"
     CDS             complement(6159..7205)
                     /locus_tag="SB502_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEG0434154.1"
                     /translation="MSKKFFLSLGLVALLFSNSQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDIGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7322..8305
                     /gene="corA"
                     /locus_tag="SB502_000690"
     CDS             7322..8305
                     /gene="corA"
                     /locus_tag="SB502_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEG0434155.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8326..8868
                     /gene="mog"
                     /locus_tag="SB502_000691"
     CDS             8326..8868
                     /gene="mog"
                     /locus_tag="SB502_000691"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HEG0434156.1"
                     /translation="MDTINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAMCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8865..9050)
                     /locus_tag="SB502_000692"
     CDS             complement(8865..9050)
                     /locus_tag="SB502_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HEG0434157.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLIRANKF"
     gene            9178..10365
                     /locus_tag="SB502_000693"
     CDS             9178..10365
                     /locus_tag="SB502_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEG0434158.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIINIAWIGFGFLYLKELLILNNTRFENTLFLLSFLIITS
                     ILNLPLSIYESFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYALLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMKKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGVIIMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFILANIFSFLISPILNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYAFFYLSHPSISDRIK
                     ALS"
     gene            10362..11177
                     /locus_tag="SB502_000694"
     CDS             10362..11177
                     /locus_tag="SB502_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEG0434159.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIKI
                     DHEPYFELIKRFKSGEPFEYIFEKVDFWGLEFNIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELELKITACDINPKALELALENAKLHKVDHLIDFKL
                     CHFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQGYNRAFIAKFTNMRYDKK"
     gene            11190..11660
                     /locus_tag="SB502_000695"
     CDS             11190..11660
                     /locus_tag="SB502_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEG0434160.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFKIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQNLGENTTKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11699..12448
                     /gene="flaC"
                     /locus_tag="SB502_000696"
     CDS             11699..12448
                     /gene="flaC"
                     /locus_tag="SB502_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HEG0434161.1"
                     /translation="MMISDATIMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATDGLSID
                     NQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12483..13115
                     /locus_tag="SB502_000697"
     CDS             12483..13115
                     /locus_tag="SB502_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEG0434162.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASIIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKENIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13127..16729)
                     /gene="dnaE"
                     /locus_tag="SB502_000698"
     CDS             complement(13127..16729)
                     /gene="dnaE"
                     /locus_tag="SB502_000698"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEG0434163.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNIILPEETKEFSFDNDDIVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGPEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGIIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLEFEGLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGTKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            16979..17164
                     /locus_tag="SB502_000699"
     CDS             16979..17164
                     /locus_tag="SB502_000699"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434164.1"
                     /translation="MAEELQSDFKDVEVEFEIGGRGDFIVEVDGKVIFSKTQLINCES
                     ERFPYQNEINQLIKNRV"
     gene            complement(17177..17506)
                     /locus_tag="SB502_000700"
     CDS             complement(17177..17506)
                     /locus_tag="SB502_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HEG0434165.1"
                     /translation="MKFYGIKNCNSVKKAIDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17503..18843)
                     /locus_tag="SB502_000701"
     CDS             complement(17503..18843)
                     /locus_tag="SB502_000701"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEG0434166.1"
                     /translation="MWAKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIK
                     IGRIAGQFAKPRSSDFEELDGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAT
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLSGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18867..19280)
                     /gene="uraH"
                     /locus_tag="SB502_000702"
     CDS             complement(18867..19280)
                     /gene="uraH"
                     /locus_tag="SB502_000702"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEG0434167.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
BASE COUNT         6835 a         3261 c         2594 g         6672 t
ORIGIN      
        1 aaatattaag cattgctcta gttgctttag ttggtttatt tttaggtgct tgtagtgatt
       61 ctaaaaataa agaatcaaat gcaagtgtag aattaaaggt tggaactgct ccaaattata
      121 aaccttttaa ttataaagaa aactcaaaac ttacaggttt tgatactgat ttggttgaag
      181 agattgccaa aaaaaatggt attaaaattg tttgggttga aaccaatttc gatggattga
      241 ttcctgcctt aaaagctggc aaaatcgata tgattgcctc agctatgagc gcaactgatg
      301 aaagaagaca aagtgttgat tttaccaaac cttactatat gagtaaaaat ctttatctta
      361 agctaaaaaa caacgactct cttcaaacaa aaaatgattt agaaggtaaa aaaataggag
      421 ttcaattagg aactttacaa gaaaatactg caaaagctat caaaaatgca caagtacaaa
      481 gcaataaaga tttaaacata gctgttttag cactaaaaaa caacaaaatt gatgctattg
      541 tagctgatca agatactgct aaaggttttt tagctgaaaa tccagaattg gtaagtttct
      601 accaagaaac agatggagga gaaggcttta gttttgcttt tgataaaaat aaacaaaaag
      661 atattattga aatatttaac aaaggcatag atgaagcaaa aactgatgga ttttatgata
      721 ctttaattaa aaaatatgaa ttagaataag cgtgaatttt cacgcttata gcttaaaaag
      781 ttaaaatttc atattttctc tcttttgcaa tttttaaaat tttttcatcg ccattacata
      841 caaaggcttt gctaacagac tctagtaaag gtaaatcatt gatagaatca ctaaaaaaat
      901 aagaatcttt catccatttt tcataatctt tacccaaata ttccttaagt cttaaaacct
      961 tgccttcctt aaagctataa atcccataag cttttccact aaatttatca cccacacgct
     1021 cgcattttat ggctatgctt tctctcactc ccaaaaaaga ggcgattttt ctaactaaaa
     1081 attcagccgt agctgaaatt ataatacacc tttgatcttg atatttgatt ataagttctt
     1141 tagctttttc ataaggtttt atataaattt ttataaattc atctactaaa gatgaaattc
     1201 tatcttcatt tttaccctta acactttgaa gaaaaaaagt cataaattca tccatatcaa
     1261 gctttttttc ttgatattgt ttttgataaa aaacgatttt ttctaaatat tcttgaggta
     1321 aaaaaccttt ttcaacacaa aatttaagcc aaagtttagc actatcgcct tgtattaaag
     1381 tatcatctaa atcaaataaa acaagcttca ttttaactct tttgctaaag aaagattgaa
     1441 ttttaaagcg attttatcac ctgcttcata agtactatga gtgctaaaat ttaaagtatc
     1501 taccttaaat tcaatttctt gcactctaac cctatagcgt atgatattac ctagcaatga
     1561 tttttctttg atcttagcct ctaagccttc gttagaaatt tctatggttt caggacgcaa
     1621 ggctatatct tttttaaaat cgtgttttaa acccaagcta tcaagctctt tagggcttaa
     1681 aatattgtaa tttcctataa agctagccac aaaatgagat tctggcaaaa aataaagatt
     1741 gtttgcgttg gaattttgta tgattttacc ctcattcatt aaaataatcc tatcggataa
     1801 ctctaaagct tcttcttgat cgtgcgttac aaaaatagtg gtgagttcaa gttctttttg
     1861 aatttcttta atttgcaccc ttaaatgctt acgaatttta gcatcaagtg ccgataaagg
     1921 ctcatcaagt aaaagtaaat caggtttagt caccaaagat cttgctaaag ccactctttg
     1981 catttgtccg cctgaaagct tatgtggata agttttagcg tattcttcaa gctcgacgag
     2041 ttttaacatt tttttcactc ttttttctat gtccttttta tccatttttt tgatctttaa
     2101 accaaaagct acattttcaa aaacgttaag atttggaaaa agagcgtaat tttgaaaaac
     2161 catacctata tttctttttt gaggacttaa tttggtaaga tctttatcat ttaaagaaat
     2221 ttttcctcca ttaatttggc taagccctgc tatacacctt aaaagagtgg attttccaca
     2281 gccacttggg cccaaaaggg ttataaactc acccttttta gcactaaaat taatatcttc
     2341 aaaaataatt ttatccccat aagctttttt aaaattttta atctttaaat aagccatttt
     2401 ttactcctta atcaaactag ctataaaagt tgttataaaa attaacacaa aataaactat
     2461 taccaaagca ctagaataat gcccactttg atttttgata ttataaagat aaacttgcaa
     2521 agtctcataa gcacttccta caagaatatt tgcatataaa aattcgccta ttaaaaaaga
     2581 aaaacttaaa aaaactgcca ccaaaattcc atttcttaaa ttaggcaaga caagcttaaa
     2641 aatcgctccc attaaagaac ctccaagcat agcattagat gcgatgagtt catttaaatt
     2701 gacattagac atagcattat ctaaagccct atatataaaa ggcaaagcta tagtaaaata
     2761 agtaaaaatg agtatccaag ctgtgcctcc catattgtca gcataaagtt gcaaaagccc
     2821 tacacagcta actataggag gtacagcaaa aggcatgata ataagtatat ttacaaaggc
     2881 ttttaatttt aaaaaataat aatttagcac aaaaaccaaa ggggaaacaa gaatcacaga
     2941 aagtaaaata ctgcccacac aaacaagcaa agaatgccaa agagcaagta aaaatctttc
     3001 atcatgaaaa agttcttgat accatttaag cgtaagatca tcaggcaaaa cacttacacc
     3061 ccaagaagtg gaaatagaat ataaaaaagt agccattaaa ggcaaagcta aaaataaaaa
     3121 aaccaaaaac aaaactgcat aatgataaat tttagctttt aaactcaaat tttcattcat
     3181 ttaaagcacc ttaaaattat attttttaga aagaaaattg gctataaagg taatagcaag
     3241 catgataata gttataatga tgcttaaagc actagccata taaggatcaa gattgatatc
     3301 gcctgcgatt aaagcagcga ttcttacagg ggcgacatta aaatttcccg aacttaaagc
     3361 ataaatagtc gcataagctc caaaagcatt ggcaaataaa atcacaaaaa caccaaacaa
     3421 agcaggagcg agcaaaggca aagctatttt taaccaatat aaaaaattgc ctccacctaa
     3481 cattttacaa gcatttaaat gtgaattttc aagactttta aaagctggaa gcaaaagcaa
     3541 gattgccaaa ggaatttgaa aatacacata aacaatattt accccgaaat tagcataaac
     3601 actaacaaaa ggctctatac ctaaattctt caaaaacaca ttaactacac cattgcttcc
     3661 aagaactata atgaaagcaa aagctaaagg aactcctgaa aaattactta tcatagtatt
     3721 taaagaaaag agaaaattac atatttttga tggagctaaa ataaataaag aatagctcgc
     3781 caaaagccct attaaaagtc caaaaatact agaaataaaa ctgatttgta aagaatttat
     3841 aatgctttgt agatagaatt tggactcaaa aatatgtata aaattggcta aagaataaat
     3901 ttcatcctct tctacataaa aagcattaaa aacaatccaa atcaaaggtg ctatcataaa
     3961 aaaagtaaaa actataaaaa aaggtaaaat acttaaaaag gctagaaatt tttctttcat
     4021 tttctggcct ttaaaatttc atcattatat ctcttatcgt gtttaagtcc taaaatttca
     4081 cagacactgc cacaaatttc atcctgtttt atcttagcat tttcatacga aaaagcacta
     4141 ccaaaagtga aaaaaggcac taaaatttca tcttcgctta agcctccatg acttttaccc
     4201 tctgtcatac catgatcgct tgtgatgatt acattaatac cttgttctaa ccaagtaggc
     4261 aaatactcag aaatcaaaac atcaactttt ttggttttat tagcatactc gatagagtgt
     4321 gagccaaatt tatgtcctgc atcatctata ttcatagagt gtataagagt aaaatctaga
     4381 ttatatttgt ttcttaaatg ctccccatct gcaaataaat gagaatctaa ataatcatct
     4441 tcataataaa aatgtccata aggtaaagtt aaattttcat cttctatatg gcgatgtaaa
     4501 gaaggaataa attctttttt attataaagc tcaaaaaccc aatgataagc tgcgcctcca
     4561 gcttttaagc cttgttcttt gcaaaggtca aaaatgcttg tttgttttga aaaactcgat
     4621 ttattattaa ttatcccact taaaacaggc tttacgcctg ttaataagca ctcgtataaa
     4681 gggacgagac atactaggaa gttcgcattc taaagaataa aatttgccta aattctcttt
     4741 gcaaagtgca ttcaaatatc ccatatttat actagtgctt ttacaattta agccatcaag
     4801 cacaactaaa ataactttgg acatcattta ctctttaaaa aatcttttac ttcaagcaaa
     4861 ataaactcat tatcatcagt cttattaggt tctctacttg aagaataagg aaagttattg
     4921 tcattttcta caactatatg agagtcatct actatatcca caccttctat ggtttcaaaa
     4981 ggaaaaacaa atttatcatt taccaaaggc tttttagaaa ttttatttct atccttaata
     5041 tttaaaagat ctatataaga aattttttga gcttcatgag ttttatcatc taatttaacc
     5101 ttataaattc ttttaaattg agctacatta ttaaaacaat gcttagtatc ttcaccttct
     5161 ttgcaagcct tatctttagt gccttctttt tgatctcttt ctatgatgat gccgtattta
     5221 tcatctatca tattaaaatc acctatggaa tggcttttat cttctaagaa atatttataa
     5281 gtttttccgg tgaatttttt attttttaca tcaaattcta tgattcttag atattcttta
     5341 cctttttcat tctcataagc gttgttatta taaatgcttc cttctaaaag caaataaagt
     5401 ttagaaccat ctttagagct tgccatagct tcaaagcctt tagaacgctt gatattaaat
     5461 ttctcatttt ctccatcagg cttatcgcta aattttaaac ttggattatc aggagaaata
     5521 agttttttac cctccacata cacatcaaaa acttctttca aattcccatt cttatcaaaa
     5581 tgaagcaaat aaggaccaaa ttcatcacct atataaaatt catcattgat aacctgtata
     5641 ctctcagtat caaaatcagc cccacttaaa tacctttctt tagttgtttc ggtggttata
     5701 ggataggggt attttttatc actatcttta aaaaaactgt ttttaaaagt tcgtattttg
     5761 agtttttaaa atcaaattta aactcgtgag cataaagcat agaatcataa gaattatact
     5821 ttttacccaa gccattatcg ctaattaccc aaaaaacatc tttttttgga atatatttta
     5881 tcccactatg tccttgtata ggttgatttt taaaaggtaa ataaaaatct gtttccctgt
     5941 ttcccttaga tttaaaagtt ccaatttttt cttctctagt gatatttgca aatttcccat
     6001 aagttttaaa aaaatcagga gcatccttag gaggttttac tgtactttta gaatctatga
     6061 taatatgccc tgctaaattg gcctcatact cttgaactcc aaataaaaca ctgcaaagca
     6121 tagcacttgt taaaataacc tttttcatcc aatctccttt atttcatatc cactataact
     6181 ttttcttgcc aaagttgtgg taattcttta gcgctttttt cccaagcttt ttgatctttg
     6241 attgctcttg catttttgta ttgctcactt ggtaaaagtt tggcttttat atcatctggc
     6301 aaggtaatat gatcaattct tattggcctt gcataacctt ttgctagatt gatttgtcct
     6361 ttatcagaaa gtataaactc acgagctaat ttagccgcat ttggatgttt tgcgtattta
     6421 ttgataatag ttgtataacc cgaaataaca ctaccatcag cagggattaa aacttcataa
     6481 cgatctttgc ccactttatc tctatagcct aaaccattaa aatcccaaac taaacccact
     6541 tcaacttcac ctttttcaag attggctata cttacatcat tatttacaag tcttccttgt
     6601 ttagctaaag tattaaaaaa agctaaagca ggacttaaat ctttttcatc cccacctaag
     6661 gcataattag ctgccaaaac tgcactcaca gcttgagctg ctacacttac atcacccacg
     6721 gtaattttat aatttccctt aagcaaatct tgccaagttt taggtatatc ttttactaca
     6781 tctttattga ctataaaagc tatggttcct gtataagcta aaagccaatt tccatcttta
     6841 tctttagccc aagttggaat ttgatcccag taacttgtct taaaaggctg agccactcct
     6901 tgtttaaccg ctatctctcc aaaagaagcc cctatatccc ctatatcacc gcttgcattt
     6961 ttcttttcgg ctttaaattt agcaatttct tgagctgaac tcatatctgt atcactatgt
     7021 tctatgccat aaagattttt aagatctgcc caagtatcct tccagtttgc ccaagtatca
     7081 ggcatagcta aagaatttac cctaccttct gcttgcgcag ctttaatcaa attctcatca
     7141 atagcttgtg aatttgaaaa caataaagca acaagaccta aacttaagaa aaatttttta
     7201 ctcatttttt tcctttcaaa aaatattttg gaaatttaat gagttttaga aacattttag
     7261 aaacaagtta atttttaagc aaacaaggtt ataattttaa agtcataaac aaggagcgat
     7321 catgctttat atttatatca aaactcaaaa tgctttagtt caaagaatca attttaatct
     7381 cgatagccaa gaactaccgc aaaatatttt atggattgat ttacttcatc caagtgcagc
     7441 agaaattgct tttatatcaa gtgaatttaa tcttgagttt cctacaaaag aagaaaggga
     7501 agaaatagag cttagcgcaa aatattggga agataatgcg acaataacca tcaatgctca
     7561 ttttttagta agagatctta aaagtgatga agaagatagg aatttaatca agcttcgcac
     7621 agaaattgtt acttttgcta ccgctaaaaa tatcttattt actataagat ataacgaatt
     7681 tagcactttt gaagaaattc aagcaaggat tttagctagt ccgaagaatt ttgaagatgg
     7741 ttttgatatt attgataaaa tgtttgaagt acgcgttgaa aaagatgcgg atttactaga
     7801 atggatagat aaagaagcaa gacgcttaag aacaagtgtt ttagaaaaaa aagatgaata
     7861 tagttatgat gaaatgctaa aggatatttc aagtttgcaa gagcttaata tgcgcgtaag
     7921 agattcttta tttgataagc gtcgtgctat gacttctttg ctaaaaagcg ataaaatcga
     7981 taaagatata aaacaaaatc tcactatagt tttaaaagac ttaaattctt tggttgaatt
     8041 tagtgtttcg caacttaata tcttagataa tattcaaact attttagcca gccaaatcaa
     8101 catagaacaa aacaaaatca ttaaaatttt taccgttgca actgttgcca tgatgccacc
     8161 tactttaata ggaactgttt atggtatgaa ttttaaattc atgcccgaac ttgaacttca
     8221 ctatgcttat cccatagtgc ttggtgtaat ggtaatttct atcattttac ctttggttgt
     8281 ttttaagaaa aaaggatggt tataaaaatt tattaaggag aaacaatgga tacaataaac
     8341 ataggaattt taaccctaag cgatagagca agtagtggca tatacgaaga taaagccact
     8401 gctgaaattg aaagagtgtt aaattcatat ataaaaaatg atattattta tcataaagaa
     8461 ttaatccctg atgattatga tttgatcatt aaaaaattac tttatctagc agatgaaaaa
     8521 aaatgtgatt tgattgttac aagcggaggt acaggtccag cacttcgtga tgtaacccca
     8581 gaagccacgg aagctatgtg tgataaaatg atgccaggtt ttggagaact tatgcgctta
     8641 gaaagtttaa aatatgtccc aacagctata ctttcaagac agagtgcagg aattcgcaat
     8701 aaatctttta tcattaattt accaggaaat cctaaggcta taaaagaatg cctagagcct
     8761 gtttttccgg ctatacctta ctgtatcgat ttgatagaag gtgcttatat agaagcaaat
     8821 gatgaagtta ttaaggtttt tcgccctaag aaaaaatgtc aaaattaaaa tttattagct
     8881 ctgataagtc tgcttaattg tctagcaagc agacttgccg aagcttcatc tttgcttatc
     8941 ttttgcactt tatttttaaa cttacaaagt ctgtcatcta aaatcacatc attgattgga
     9001 attttaggct tttctttttg tttttgtgaa atctttttct taaaaaacat tctttaatcc
     9061 tttttttata aatatacacc aacttagttg aaaagaatat tattttagat tttaaactat
     9121 taactttatt tcattatttt aagctagaat tcgcaaaaaa ccaatcaagg aaaaataatg
     9181 actttaattg caattttatg tctttacaca gcacttttat cttggatttc ctatgctcaa
     9241 attcgtttct tagaaagaga aaaagacaaa caagctcaaa ttttaagcga aaaagactat
     9301 caaaatgcag cagatattgc catcgaaaat gaaaaattta aactattttc caatttttat
     9361 aatttaatca tcaatattgc atggataggt tttggatttt tatatcttaa agaattgctt
     9421 atcttaaaca acactcgttt tgaaaatact ttatttttat tatctttttt aataatcaca
     9481 agtattttaa atctaccttt aagtatttat gaaagtttta tcaaagataa agcccatggt
     9541 ttttcaaata tgactgtaaa actttttatc aaagacacta tgaaaagtct tattttaact
     9601 ttaatatttg gatttttaat cctttatgct ttgctttttt gctatgattt ttttggaact
     9661 ttttggtgga ttgcggcctt tatttttgcc ttttgtatta tagtgattat aaatctcatc
     9721 taccctacct taatagcacc tatttttaat aaaatgaaaa aactagacga tgaaaatttg
     9781 ctgaaaaaaa tcagctcttt gatgaaacaa tgtgggttta gtgcaaatgg ggtttatgtt
     9841 attgatgcaa gcaaaagaga taagcgttta aatgcttatt ttggtggact ttttaaaagc
     9901 aaaagagtgg tgctttttga tacattatta aaagccttaa atgaaagaga acttttagct
     9961 gttttaggac atgagcttgg acattttgtt cataaggata ttatcaaagc tttatttaac
    10021 ggcgttataa ttatgttttt actttttttt gtttttgcaa atttacctga atttgtttac
    10081 ttagaaagtc atctagaagg agtaaatggt ggcgtgtttg ctcttttatt tatcttggca
    10141 aatattttta gctttttaat ctctcctata cttaacgcct taagtagaaa aaatgaattt
    10201 gcagctgatc aacacggagc taaagttaca agcaaagaag atatgaaaaa tgcattgata
    10261 gctctagcaa gagaaaataa agcttttatc aaaacaagta aaatatatgc atttttttat
    10321 ctcagtcatc caagtattag tgatagaatc aaggctcttt cttgactata aaaaatgctc
    10381 ttatggaagc taaatctagc ttaaaaggtt atgaaaatga agcagtattt atactctgtg
    10441 aatatctaaa aaaagataaa gcttggttat ttttaaacca agatataaaa atagatcatg
    10501 aaccttattt tgagcttata aagcgtttta aatctggaga accttttgaa tatatatttg
    10561 aaaaagtgga tttttggggc ttagaattta atataaaaaa aggcgttcta atccctcgct
    10621 atgatagtga aattttactt tttcaaattt taaatttatg caaaaaaaat acttttaatg
    10681 ggattttaga aataggattt ggaagcggaa ttttaagcat tgttttagcc aaagaacttg
    10741 aattaaaaat cacagcctgt gatatcaatc ccaaagcctt agaattagct ttagagaatg
    10801 ccaaattaca caaagtcgat cacttgattg actttaaact ttgtcatttt aagcaaatta
    10861 aagaaaatta tgattttatt ttttcaaatc caccttatat taaaaattca tatcctatag
    10921 atatttgggt gcaaaaagaa ccgaaagagg ctttatttgg cggagaaaaa ggatatgaaa
    10981 ttctagaaga aatcatacat ttttcccttg ataaaaaagt taaattttta gcttgcgaat
    11041 ttggctatga tcaaaaagaa attttggaaa aaattttata tcaaaataat ttcattgttg
    11101 attttttcaa agatgaacaa ggttataatc gtgcttttat agctaaattt acaaatatgc
    11161 gttatgataa aaaataaaag gagaaactct tgaaagctgt taatttattt ttacttgcct
    11221 ctatcatagg ggttgaactc atactaggaa tagttgttgc accaacaatt ttttttcctc
    11281 aaaatcttat aggagaagga gtgttgagcc attttcaaag tggcttaatg atgacgcaaa
    11341 tttttattaa gatgggatat ttgctgattt ttgtttcagt ggttaatttt ttatatgaaa
    11401 tttattctct tataaaagat gaaatgaaat ttaaaataaa attttcaaaa tttatgctga
    11461 gtttgcttat tttgatttta agcttaatat ttgtttttta ttttactaat accataattg
    11521 aactccaaaa cttaggcgaa aacactacaa aaactcaaga atttatcagc atccataatg
    11581 caagtgaagt ggtgattaaa atcatcttga taatgcaagt ttttttatat ttcttaagct
    11641 ttaaaatagc aaaaaaatga taaaatatta aataaatcca aaagagaagg agtaggccat
    11701 gatgatctct gatgcaacta taatgcaaca aaattattat ttaaataatg cacaaaaagc
    11761 tagcgataaa gctttagaaa atattgcagc tgttcgcgca ataagtggag ttgatagtgc
    11821 taatttagct attgctgatt ctttaagatc tcaatcaagc actatagatc aaggtgtcgc
    11881 aaatgcttat gatgctatag gggttttaca aattgcagat gctagcctta ccaatatctc
    11941 tcaaagcgca gatagactta atgaactttc agtaaaaatg aacaatgctg cacttaatga
    12001 ttctcaaaaa ggaatgctaa gaacagaagc aacacgcata caagaatcca tcaatgattc
    12061 ttttaataat gcaacttata atggaaaaaa tgtctttcaa actatgaatt ttgtagtagg
    12121 tagcggaact gaaactacaa atttaaatcc attagcaaca gatggattaa gcatagataa
    12181 tcaagatagt attacaaatt ttatggatca acttggaagt ttaagaagtg aaataggctc
    12241 aggtatcaat gccatcacat caaatattaa tgcaagtgtt caaaatagca tcaactcaaa
    12301 agcagctgaa aataatttac taaataatga catggcaaaa aatgttaatg attttaatgc
    12361 caattatcta aaagaaaatg ctgctgcttt tgttgctgcg caatccaaca tgcagcttca
    12421 aagcaaaatt gctaatttat tacaataaaa taagccctaa atagggctta ttttttatca
    12481 aaatgacttt agagcaaatt ttagaaaaaa ccaaaaacgt tcgtcttgta gccgcaagca
    12541 agtatgtcga tgcaagtata attgaaaagc tttttgatca aggtatagta gaatttggag
    12601 aaaatcaagt ccaagctcta gcacaaaaaa aagaaaatct tgatgaaaaa aaactagaca
    12661 taaaatggca ttttatagga acgctacaaa gcaacaaaat caatctctta atcaaacaaa
    12721 aacctatatt atggcactct tgtaatggta ttaaaatagc taaagctatg gacaaaagac
    12781 ttgattataa attaaatact ttattagaaa tcaatagtgc aaatgaaaat agcaaaagcg
    12841 gtctagatcc aaatcaagcc gtagaagaat atttacaaat acaagaagaa tgctctaatt
    12901 taaatctttg tggcgtaatg agcataggat cacacagcca agataaagaa aatattataa
    12961 aaagctttga aactacattt aaaatttatg aaattcttca aaaacatggg gctaagattt
    13021 gctctatggg gatgagtaat gattttgaaa ttgctataaa atgcggatcc aacttggtaa
    13081 gactcggaag cattttattt aaaaatctta agtaaaacaa tcttacttaa gcatatttat
    13141 tagaaatttc ctctactata ctatcagaga taataaaatc tgtatgataa agcaggcaag
    13201 atcccgcgct aataactttt aaaacaagtt ttttattatt tttttcatta ggattatgtg
    13261 catttctagc aatttcatga atttcataga ttaattctct atttaacctt gtcaaatcta
    13321 gctctatgat atttttttca aattccttag gttctgcggt aaaatgattt tcttctttat
    13381 ttttaaaatc tttttttgtg ccaaattttt ttatagcttt aatctcacca tcttcaagac
    13441 tttgcaagtc tttaattgct tttaaaaaaa agctgggctt ttcccctcct tcagctttaa
    13501 atcccaatac aaaaccataa gcattatttt tcaaattttc atctttaatg atattttcta
    13561 tttcttctac attactttca aatacagtag catcaaacga agaataataa tccaaaattt
    13621 caattctacc ataacgctta ttatttttac tcatcataga tttaaaatct tcaattttac
    13681 ctatacttaa aatttctcca ttgtttttta aaccttcaaa ctctaaactt ttaacataat
    13741 ctatggcatt aatttgttca taaaatcgat ctaaaggatg gcctgaaaca taaattccta
    13801 aaatttcttt ttcatatccc aatttttcca tcacttcaaa ttcttcattt ttgggagtaa
    13861 aatttacttg aacacctgaa gttaactcct cttcaccaaa aagagaactt gcagcatttt
    13921 ttcttacttc agccatttta cgcgatgctt cgctaagatt ttccatatta tcaaacaaag
    13981 cttttctagt aaaaccaaac tcatcaaaag cccctgcctt aataagactt tctaatgttc
    14041 tacggtttat cttggtagga tctatcttac ctaagaaatc attaatatcc ttaaattctc
    14101 catcttgcct tgcttcaagt aaattttcaa ctgcaggaat acccacactt tttatagccc
    14161 caagtccgta tataatagca tccttgccat cttgctctaa agcactaaat tcacggatcg
    14221 ctttgttaat cgatggaggt aaaagtttaa tattcatttt tttcatctca tcaatataaa
    14281 cagcaatttt atccacattg ttttcttcgc ttgttaaaag cgctgccata aattcactag
    14341 gataataagt ttttaaataa gctgtttgaa aagtaatcaa cgcataagcc gcagagtgag
    14401 atttattaaa accatatcct gcaaatttta cgataagctc ccataaatcc tcagcttttg
    14461 ctctatcata tccttgtttt tctgctccat ctgcaaaatc agttttaagc tttttcatct
    14521 tctcaggatc ttttttaccc atagcacgac gcactacatc agcacctcct aaagaaaagc
    14581 cacctataat ttgaacaatt tgcataacct gttcttgata aacaataatc ccataagtag
    14641 gctctaaaac cttttctaaa ctgtcaaaag gatattctat actttttaaa ccatgctttc
    14701 tgtcgataaa atcatcaagc attcctgatt ccatagggcc tggacgataa agcgcaagaa
    14761 ccgcaatgat atcttcaaaa cgctctggtt ttaagcgtgc atttaagctt tgcataccgc
    14821 ctgattcgat ttgaaaaatt cccaaagtat ttccactttg tatggtttta taaactttgc
    14881 tatcatttac atctatagtt tcccaaataa tgtctttatt gtaacgcttt ttaataagct
    14941 tgatcgcatt attgattact gttaaggttt taagacctaa aaagtcaaat tttatcaaat
    15001 ctacatcttc taaatgatct ttagaatact gcgttaccaa atgtctttca tcatttttac
    15061 tttgtctaaa aagcggagtt ttcttccata aactttcatt agaaattaca acacctgctg
    15121 cgtgcatacc cgcattgcga tttaatcctt ctaaagctct tgcatactcc caaacttcag
    15181 gacctttagg atgacgatca ataaattctt tgattttagg ttctttttca taagcagcat
    15241 caagagtgat tttaagctct tcaggcacaa gtttagcaag ctcatcagca tcttgaatac
    15301 tcatatcaca aactctagcc acatcacgaa tcaccccttt agccaaaagt ttaccaaagg
    15361 taatcacctg tgcaacctta tccgctccat atttatcaat cacatagtca atcacttcag
    15421 cacgtctgtc ttgacaaaaa tccacatcaa tatcaggcat gctcacacgc tcaggattta
    15481 aaaaacgctc aaaaagtaga ctataaggaa taggatctaa atccgtaatc cttaaacaat
    15541 aagaaaccaa acttcctgca gctgatcctc ttccagggcc tactggaata cctttatctt
    15601 tagccacttt aataaaatca tgaacaataa gcatataacc tgaaaatttc atatttttaa
    15661 tgatgttaat ttctacttca agtctttgtt tgtattcttc atgcttgctt tcatcgataa
    15721 attttaatct ctcttcaagt ccctttttac aaagttcttc aaaaactatg tcatcattat
    15781 caaagctaaa ttcttttgtt tcttcaggta agataatatt atgatcttta gcatattctc
    15841 ttgtaaattt aaaattcggt ggagtgggat tgccaagatt aagctctaaa ttacattttt
    15901 gcgcgatttc ttgtgtattt tctatagctt ctggaatatc tgcaaaaagc tcactcattt
    15961 gctcagggct tttaacataa aattcatgca cactatgacg cattctatca gggtcattaa
    16021 gtttttttcc catagctata cacataaaaa cctcatgggc agccgctctt tctttaaaag
    16081 tataatgcgt atcatttgta gcaataattt ttatatttaa ttctttagaa agtctgataa
    16141 tatcatcatc tatcattctt tgatcaccta taccatgacg catgatttca aaataaaaat
    16201 catctttaaa aactttttta taccataatg ctgcttcttt tgctgcttca tagccttttg
    16261 caccaaaacg cacatttctt tcactataag tatttaagtg ccaatttact tcaccttgca
    16321 agcaagcaga agaacaaata agaccttcgc tataatcttc caaaagcttt ttattgatac
    16381 gcggataata atacaaacct ttaatataac tttgagaact taaatacatt aaattttgat
    16441 atccgatctc attttttgca tacaaacaaa ggtgaaaacg ctgacgagaa cttttatcat
    16501 ctaattcatc atgattatgt aaatacgctt ccataccaat gataggtttt aaaccttgtg
    16561 ctttcattgt ttgataaaaa tcaattgccc caaacatatt tccatgatct gtcatagcaa
    16621 cacttgtagc accctgctct tttaaagtca aagctaattc tttaagttta ttggctccat
    16681 caagcaaaga atattctgta tgtaaatgca agtgtgtaaa ttgactcatt ttcttccttt
    16741 aattttttaa ggcttatttt aattttgata aaaattataa atttttctcg ctgaatttga
    16801 aagaaattag ccctaaattt caacttaaat ttgacaaaaa ggcaaaaatt cagccaaaat
    16861 aaactataat aaagtctaag attttaatct taataaaaag aacttttcaa aggatgaaat
    16921 gatgaaagta aaaattgctt attgcaatct ttgaaattat cgcccacaag ctgcaaggat
    16981 tgcagaggaa ctacaaagcg atttcaaaga tgttgaagta gaatttgaaa ttggcggcag
    17041 aggtgatttt atcgttgaag tagacggaaa agttatcttc tctaaaacac aacttattaa
    17101 ttgcgaaagt gaaagatttc catatcaaaa tgaaattaat caattaataa aaaatagagt
    17161 gtaatcaaac actctatcat aacattttct catattcctt accaatatat atgttttgct
    17221 catactcgat aataggacgc ttaatacaac ttggattttc taatacaatt ttttcaagtt
    17281 ctttttcatt taaattttta actttttctt tgtttaagcc aagtttttta gaagttaatc
    17341 cagcagtatt gataagttct tcaaaagatt tttgttttaa ccatgtgtat aaaatatctt
    17401 gattaatctt tttaatatcc ataaaatcaa acacaatacc tttttgtgtt aaagcatcta
    17461 tagctttctt tacagaattg caatttttaa taccataaaa tttcattttc tagccttttt
    17521 taccaaatct gcgattaaaa aagcaagttc taatgcttga tccgcattaa gtcttggatc
    17581 gcattgagtc tcataacgat cttccaagct ttgagcagta acattgcttg caccacctgt
    17641 gcattctgtt acatctttcc cagtcatttc aagatgcact ccacctggat aaaccccttc
    17701 gcttattgca atctcaaaaa aagatctcac ttcttgcata attttatcaa actcacgtgt
    17761 tttaaaattg cctgctttta ccgtatttcc atgcatagga tctatgctat atactaaatt
    17821 taaaccttca cttttaagtt tagagaaaat ttttggcaaa ttattgataa ttttatctgc
    17881 acccatgcgg ataataatat ttaatcttcc ttcttcatta tttggattta aaacatttgc
    17941 taaagctatg atatcatcag cacttgcact aggtcctatt ttaaccccta aaggattttt
    18001 tactccactt aaaaaatgca catgagcttc atcaagcgcc cttgttcttt cacctatcca
    18061 aagcatgtga gctgaacaat cgtaaatttc tccacttaaa ctatccactc tagttaaagc
    18121 ttcttcataa ggcaaaagta aagcttcatg tgaagtataa acactaactt ctcttagact
    18181 tggagtatta cttgtattaa ttccacaagc ttccataaaa gctaaagctt gtgaaatttt
    18241 ttcactgata tcagtatatt gcttatggag ttcactcttt tttaaaaagc ccaaattcca
    18301 acgatgtact tcatgtaaat ctgctaaacc acccttagca aatccacgca acaaatttag
    18361 cgttgttgcg ctttgataat aagcttcaag cattctatgt ggatcaggaa tgcgtgcttg
    18421 ttcactaaat tcaaaaccat taataatatc accacgataa ctaggaagac ttataccatc
    18481 taactcttca aaatcactac ttcttggctt ggcaaactgc cctgcaatac gaccaatttt
    18541 tataacagga catccaccag caaatgtaag tactatagcc atttgaagta aaattttaaa
    18601 catatcacgg atatttacag cgccaaaatt ttcaaaactt tcagcgcaat ctccaccttg
    18661 aagtaaaaaa gcttcttttt tacaaactct tgctaaagac ttttgaagat ttctcacttc
    18721 tccagcaaaa accaaaggag gaagtttctc aagtcttgct aaaactctat tcatttcctc
    18781 ttgatctgga tagataggtt gctgttttat aggatagttt ttccaagaat tcttagccca
    18841 catggttttt tctttcgttt tatttatcag cttcctctat aagttgaata accaaaagga
    18901 gaaagggtta ttggaacatg ataatgtttc tgatctttag aaagctcaaa acttacctct
    18961 acaaaaggat aaaaagtatt tattttgtgt gatgtgtaat agtcttttgt aaaaaattta
    19021 agcttataaa ttccaaaagc cctattttca gctttttcat atggtaataa atctcctatt
    19081 ctaccatttt cttcggtaaa ttcttcactt acttttttcc actgttgatt tgcttccaac
    19141 ttataaagct caacttttac tttaggagca ggttgtccag aagtaatatc caagacatga
    19201 gtacttaatt gatattcagt agcactcaaa aacattggca cgcttgctag tattaataaa
    19261 gtttttttaa tagaaaacat tttctctcct tgtataatat ttacaagaaa tattatacaa
    19321 gagtattatt aataattaaa atcaaataaa taataattat aa
//
LOCUS       DARATF010000026        19180 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.026, whole genome shotgun sequence.
ACCESSION   DARATF010000026 DARATF010000000
VERSION     DARATF010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19180
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.026"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1168
                     /locus_tag="SB502_000703"
     CDS             <1..1168
                     /locus_tag="SB502_000703"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEG0434168.1"
                     /translation="KEKIILKLAQILRENFKIILEANKKDMANFTKSGAMKDRLLLDE
                     KRILALCEGLEKIAYIEDPIGKISKGWKNYAGLNIQKISIPLGLICVIYEARPSLSAE
                     IAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLKEFDLQDCFAMFTQRDEILQILA
                     FDDLIDVIIPRGSSNMIQEIANNTKIPLIKQNKGLCHAFVDQSANLDMALKIILNAKC
                     QRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVKIHAHENALAYFNNSNLEIFKAN
                     ENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHSETIISNDASNIAKFQRLINSSC
                     IYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGIEDICTYKYIINGEGQIRE"
     gene            1165..2250
                     /locus_tag="SB502_000704"
     CDS             1165..2250
                     /locus_tag="SB502_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEG0434169.1"
                     /translation="MNKIEILKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGLSVFF
                     GKLNYGLIAMIGALSFLYVPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFI
                     PIGIMAMGSSILIRYYNIGAPGYFFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNALPSEIPPREYIGFDAVFVDSLIMGSFVAFSIFIGTFLELER
                     SYWIAISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHDIELILLMMSL
                     FFIGQFLVNRNYALAMIFFTPYATYLSEAANFMSENADKLILARLIDVVIGSILGLLG
                     GFVIYKPYLRVHFERIAKYIFRIKQKA"
     gene            complement(2247..3044)
                     /locus_tag="SB502_000705"
     CDS             complement(2247..3044)
                     /locus_tag="SB502_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0434170.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNK
                     GVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIG
                     KELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFV
                     FGSDWPHTNFESNVNFSSALVAFNEVVVSKKEQEQILGDNACALFGF"
     gene            complement(3055..4347)
                     /locus_tag="SB502_000706"
     CDS             complement(3055..4347)
                     /locus_tag="SB502_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEG0434171.1"
                     /translation="MIMVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVVFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFMTSQSGIIF
                     RGLMENSGIEANEAFVNSSIIFAFTIILPIVVLSFFVFNAFKNNIKISVISKPDSFDY
                     KQKTTLILMFMMIVVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLA
                     DEKQVVALIPWGTLIMICGVGMLISIAVETGAIKLFSDLVENEINVIFIPLIMCAIAA
                     FMSLFSSTLGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKYKEKLFKDLLIKAVPIGFIAAILATIIMSFIL"
     gene            complement(4466..5470)
                     /locus_tag="SB502_000707"
     CDS             complement(4466..5470)
                     /locus_tag="SB502_000707"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HEG0434172.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLTLEINLLAKENDKAEIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLHKNDFVKFFKAYLPNLEAKEPATLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNATEHFDKAIAHIEDDYLGSHWLGSFALLAMDVDIL
                     "
     gene            complement(5480..6433)
                     /locus_tag="SB502_000708"
     CDS             complement(5480..6433)
                     /locus_tag="SB502_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HEG0434173.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            complement(6420..7112)
                     /locus_tag="SB502_000709"
     CDS             complement(6420..7112)
                     /locus_tag="SB502_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HEG0434174.1"
                     /translation="MEWLLLASIPLIVSGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
     gene            complement(7272..7841)
                     /gene="efp"
                     /locus_tag="SB502_000710"
     CDS             complement(7272..7841)
                     /gene="efp"
                     /locus_tag="SB502_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEG0434175.1"
                     /translation="MASYSMGDLKKGLKVEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDEDVGE
                     AKKWMIDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            7957..8280
                     /gene="rnpB"
                     /locus_tag="SB502_000711"
     ncRNA           7957..8280
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="SB502_000711"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(8277..8552)
                     /locus_tag="SB502_000712"
     CDS             complement(8277..8552)
                     /locus_tag="SB502_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434176.1"
                     /translation="MKQWLNNFKLALIQEDVDKLEILLDELDVKNFVKNLVKSQPSEE
                     MLKENVKDIFYQLQALLQEAIVLIDQKKKTKAFEIQKFQKALTYVRS"
     gene            complement(8533..8919)
                     /gene="fliS"
                     /locus_tag="SB502_000713"
     CDS             complement(8533..8919)
                     /gene="fliS"
                     /locus_tag="SB502_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HEG0434177.1"
                     /translation="MQNSLAYNAYSQNQAGIESPQKLIEMLYEGILRFCSRAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLDYEKGGDVAHYLSGLYTREIQLLSLANLENNEER
                     INEVINVTKGLLEAWREVHSNETMAQ"
     gene            complement(8930..10858)
                     /gene="fliD"
                     /locus_tag="SB502_000714"
     CDS             complement(8930..10858)
                     /gene="fliD"
                     /locus_tag="SB502_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HEG0434178.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSKGLANDSGFINANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDSNGKYTSDSEA
                     ETIFKNLGWELDTTSSIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVT
                     DLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGT
                     LSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKQGSLNQYLDSSGTGNKGL
                     DFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVE
                     SYDQNGVKGFKLNFSGDGSSDFSIKGNATILKELGLSDVNITSKPIEGKGIFSKLKAT
                     LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLN
                     QQLSTITNMINAANNSNN"
     gene            complement(10861..11226)
                     /gene="flaG"
                     /locus_tag="SB502_000715"
     CDS             complement(10861..11226)
                     /gene="flaG"
                     /locus_tag="SB502_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HEG0434179.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQGQEGDDRQ
                     QRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            complement(11383..13185)
                     /locus_tag="SB502_000716"
     CDS             complement(11383..13185)
                     /locus_tag="SB502_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEG0434180.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPILKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKITPCENGIFIPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYMLDRFNTKKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(13182..14105)
                     /gene="hemC"
                     /locus_tag="SB502_000717"
     CDS             complement(13182..14105)
                     /gene="hemC"
                     /locus_tag="SB502_000717"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEG0434181.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(14102..14491)
                     /locus_tag="SB502_000718"
     CDS             complement(14102..14491)
                     /locus_tag="SB502_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HEG0434182.1"
                     /translation="MNYKLSLSPLFVLEIIASILFIVFFGFGNFLFFILLSMIFGAVL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLVFPGIITSVFGIFVFFFGIALKLITK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(14488..16197)
                     /locus_tag="SB502_000719"
     CDS             complement(14488..16197)
                     /locus_tag="SB502_000719"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEG0434183.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEVKAQNACSALELVDASEEELEKAGLV
                     AGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVVGKGLEKNEIELIQREGLIKELIKTDELMEILKK
                     KVL"
     gene            complement(16181..17479)
                     /locus_tag="SB502_000720"
     CDS             complement(16181..17479)
                     /locus_tag="SB502_000720"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEG0434184.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPR
                     DIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRKTSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(17479..18372)
                     /locus_tag="SB502_000721"
     CDS             complement(17479..18372)
                     /locus_tag="SB502_000721"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HEG0434185.1"
                     /translation="MQKIDELIKQFLEELGYEPILNMLSNVKSGKKLRSKLLLAIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(18386..18922)
                     /locus_tag="SB502_000722"
     CDS             complement(18386..18922)
                     /locus_tag="SB502_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HEG0434186.1"
                     /translation="MFKISPYLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(18925..19170)
                     /locus_tag="SB502_000723"
     CDS             complement(18925..19170)
                     /locus_tag="SB502_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HEG0434187.1"
                     /translation="MFNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAMVELLEKQG
                     LTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
BASE COUNT         6592 a         3507 c         2373 g         6708 t
ORIGIN      
        1 taaagaaaaa attattctaa aattagctca aattttaaga gaaaatttca aaattatcct
       61 agaagcaaat aaaaaagata tggcaaattt cacaaaaagc ggagcaatga aagataggct
      121 tttgttagat gaaaaacgta ttttagctct ttgcgaaggc ctagaaaaaa tcgcttacat
      181 cgaagatcct ataggcaaaa tttctaaagg ctggaaaaat tatgcgggtt taaacataca
      241 aaaaataagc attcctttag gactcatttg tgttatttac gaagcaaggc ctagtcttag
      301 cgctgaaatc gcagctttaa tgataaaaag ttccaatgct tgtgtattta aaggcggaag
      361 tgaagcaaaa tttacaaatg aggctatatt tactcttgtt aataaagtac ttaaggaatt
      421 tgatttgcaa gattgttttg ctatgtttac ccaaagagat gaaatcttgc aaattctagc
      481 ctttgatgat ttaatcgatg tgatcatacc tcgcggaagt tcaaatatga tacaagaaat
      541 tgcaaacaat accaaaattc ctctcattaa gcaaaataaa ggcttgtgtc atgcttttgt
      601 agatcaaagt gctaacttag atatggcttt aaaaataatc cttaatgcaa agtgtcaaag
      661 agtaagtgtt tgtaacgctt tagaaacgct tttaatccat gaaaaaattg ctaaaaattt
      721 tataagtctt ttaatacctg aatttgaaaa atttaaggta aaaattcacg cccatgaaaa
      781 tgctttggct tattttaaca actcaaattt agaaattttt aaagcaaatg aaaatacctt
      841 tgatacagaa tggcttgatt ttgctttaag tgtaaaatta gtaaaagatt gcgatgaagc
      901 tatagagcat atcaataaac acagctcctt gcattctgaa accattatct caaatgatgc
      961 ttcaaatatc gctaaatttc aacgccttat aaactcatct tgtatttatg ctaatgcttc
     1021 aacgcgtttt agcgatggag gagaatttgg ctttggtgga gaagttggaa tttcaaccag
     1081 caaattgcat gcaagaggtc ctatggggat tgaagatatt tgcacttata aatatataat
     1141 caatggggaa ggacaaattc gagagtgaat aaaatagaaa tactaaagca acactttaaa
     1201 gaaattgcta aattaaattc aagcgaacaa gtttggcaaa tgcctttttt tgcggcttta
     1261 ggcgtaggta tagttttagg gcttagtgta ttttttggaa aattaaacta tggactcatt
     1321 gccatgatag gagctttgtc ttttttatat gttccaaaca ctcctttata tcatagaatg
     1381 gctgttgtga tgtgctgttc ttttggcata gtttctagtt ttttcttagg aattttaact
     1441 cattttttgc ctgcaatttt tgccttcatc cccataggaa ttatggccat gggaagttct
     1501 attttaatta gatactataa cattggtgca cctggatatt ttttctttgt attttcttgt
     1561 gttttaggag cctattctcc ttttgaagct aaggatttta tctttttagt aggtcttgtt
     1621 tttcttggag caatggtagc taatttaatg gctttgttat attctatcgt tgtgatttat
     1681 ggatttaaaa atgctttacc tagcgaaatt ccacctagag aatacatagg ttttgatgca
     1741 gtttttgtgg attctttgat catgggttct tttgtggctt tttctatatt tataggaact
     1801 tttttagaac ttgaaagaag ttattggata gccatttctt gcacagctat tatgcaaggt
     1861 gtaactttaa attctatatg gattaaacaa attcagcgca tcataggaac ggccttagga
     1921 gtatgttttg catggtggct tttatctaaa caatttcacg atatagagct tattttactt
     1981 atgatgtctt tgttttttat aggacaattt ttagtcaatc gaaactatgc tttagctatg
     2041 attttcttta ctccttatgc tacttatctt tcggaagcag ctaattttat gagtgaaaat
     2101 gcagataaat taatactcgc tcgtttaatt gatgttgtaa taggaagcat tttagggctt
     2161 ttaggtggtt ttgtaattta caaaccttat ctaagagtac attttgaacg cattgcaaaa
     2221 tacatcttta ggataaaaca aaaagcttaa aagccaaata aagcacaagc attatcccct
     2281 aaaatttgct cttgttcttt tttagatacg acaacttcat taaaagctac tagagccgat
     2341 gaaaaattaa catttgattc aaaatttgta tgtggccaat cgcttccaaa aacaaaattg
     2401 ctaagtggaa aatgttcttt taaaatttca tatattttct ttgcaaattt tacagcttgt
     2461 tcattattag catagtctat ttttgctcta taaaaaccgc taattttaaa aaatattcta
     2521 gagtttttta agcaaattaa atcctctaaa tttgttaagt ttgcattagc tcttgctaaa
     2581 tgatcgataa caatattaca accataagga attaaatttt caacaatatc aacaagatta
     2641 ttatctaaat ctctttgaat ttctatttgc attttaagct tacttaaatt ttcaaaaaat
     2701 tgagtccaaa ccatactttt aaaatttggt aattctttgc caattaaatt taatctaact
     2761 ccacaagctt ttctttcttt tagtttttta agctcatcaa atttaatatt ttcatcaacc
     2821 acaactatag cttttatatt ttcatctttt tctatactct gaagcaaaaa ttcattatca
     2881 atacctaaaa aacttggctg aactaaaacc cctttattaa aatcataatg atctaaattt
     2941 gctttataat ctttaaaact agcgtcataa tcaggcttat atcttgcatt tgcaaccgta
     3001 tttaactttt tcaaaaatat atgtgcgtga gtatcaatct tcattaaatt atccttataa
     3061 aataaaactc attataatag tagctaaaat cgccgctata aatcctatag gcacagcttt
     3121 aataagtaaa tctttaaata atttttcctt atatttatca gggcaagatc ctaaaattag
     3181 acttcctcca gaagaaaaag gagaaatagc agaagcttga gcccctacaa caatacaaga
     3241 aaaaagcaat gcctcgctta atccactact tgcagcaatg cttggaacta taggaaaaag
     3301 cgctggagta accacaccca aagtacttga aaaaagcgac ataaaagctg caatagcaca
     3361 cattattaac ggaataaaaa tcacattgat ctcattttct acaagatctg aaaataattt
     3421 tatagcccct gtttcaaccg ctatgctaat taacatccct actccacaaa tcattatcaa
     3481 ggttccccaa ggaattaaag caacaacttg tttctcatcg gccaatttta aaaataaagc
     3541 aatggcaaca aaaatcatgg ctatcatagc tatatctatt tttttattaa aataactaat
     3601 tgtctcatta tgtggaaaaa taatatttag cacaggaaag attaaaacaa caacaatcat
     3661 cataaacata agaattaaag tagttttttg tttataatca aatgaatcag gttttgaaat
     3721 aacactgatt tttatattat ttttaaaagc attaaacaca aaaaaagata ataccacaat
     3781 aggcaaaatt atagtaaaag caaaaataat actagaattt acaaaagctt catttgcttc
     3841 aatgcctgaa ttttccatca atcctcgaaa aataatccca ctttgagaag tcataaaatt
     3901 tgctcctccc aaagcaccat agtttatagc catagctcca gcaattttgc ttaaaccgat
     3961 tttatcgcaa agtaaaaaag taagtggtgc cataaaagct aaaactgtat aaaaacctgc
     4021 tcctaaagca gctataatag cactaaccac aaaaacaaca aaaggaagca aataaggatg
     4081 attagcaaaa cgatacatca aatgtccagc taatttttca agagttccat ttacggttgc
     4141 aaaattataa aacaatgaaa cagcaaaaat aacaaaaaat atagaaatag gccaaaaagc
     4201 tatgattttt ttaggagcta aatccataaa aaaagctcct ataatataag caaaaatcat
     4261 agcaaaaatt ccaacattat gtctagtaat atagcccaaa ataatagcca ctataatact
     4321 agagatgatt aaaaaaacca ttatcatcct ttaaaatatt atagggctta taatatcaaa
     4381 aaatatattt ttcaaagcat aaaaacaaaa tctaaattta aaaaatatct atttagtaac
     4441 aaatttactc atcttatgaa attttttata aaatatccac atccatagca agcaaagcaa
     4501 agcttcctag ccaatgcgac ccaagataat catcttctat atgagctatg gctttatcaa
     4561 aatgctctgt agcattattt cttaaaagaa tttttaaatt ttcatcgcaa aaatttgaaa
     4621 gtattttaaa acaccaagca cgacttaaat ttagcccatc tagatgtgct attttaccat
     4681 cgctcctatc actcacactc acaggggtaa ataaagttgc aggctctttt gcttctaaat
     4741 ttggcaaata tgctttaaaa aattttacaa aatcattttt atgtaaaaca gcacttaaaa
     4801 gcaccgcttc catcaaaaca ggagataaaa actcatctcc acaaggctct aaagcttgca
     4861 tatttttatc atttaaaaac cactttttag cactttggat gatgcaatac tccaattctt
     4921 gatctttttt aaatcttgca tattctaaag caaaatacaa agcaaaagag ctattaaaat
     4981 gggttccaac tcgtatagga taatccatct taggtaaaaa ctccttaaat tctttaacaa
     5041 agaaatcagc tatgccttct aaattcttag cccaaatttc agctttgtca ttttctttag
     5101 caagtaaatt tatctccaaa gtcagtttta aaaaccatcc ccatccataa ggtctttcaa
     5161 aacctttgtg tgcagggttt tgaagatatt taagctctcc ttctgctttt tctttgctaa
     5221 attgagaatc tagagctttg atgatttcat cctttggagc aaaatgagaa aaatctttta
     5281 aaattttcac caaaagccag tgagaatgca cgctagaatg ccaatcataa gaaccataaa
     5341 atataggata cataagtttt ggtggtttaa tatcattgat atcattaaaa gaatgtgtaa
     5401 ttttatttgg caattctcta aaaatatttt ctagtgcaat aaagctaaat tgttttataa
     5461 atttttccat tgtttctcct taaaatctaa aagctaaaaa atacattaaa aagatattag
     5521 ccacaagcaa aacaagtcct gacataaact gggctttaat tacgccattt ttatcatcca
     5581 aatttaaaag tgctgcagga actatattaa aatttgcagc cataggcgtc attaaagttc
     5641 cgcaaaatcc actaagcatt ccaatcgcac ctataatagc aggatttgca tgcatttgta
     5701 tgattaaaat cggcaaagca atagcagcag taatcacagg aaaagctgca aaagcattgc
     5761 ccattactat agtaaaaagc gccatagcga tacaatacac agctactgca ataaaagcat
     5821 tatctaaact aatataacta gataaaagtt tagatacttg atcgcccatt cctgtagaaa
     5881 caaaaactac cccaagtgta gccaaaattt gcggtaaaag cgctgcccaa ctaatgtgat
     5941 ccatagtatg tgctgcatct ttaacagctc ttttaggaga agccttaaac ataaaacaag
     6001 caactactga agaaataatt atacctataa tcaaagccat caatgtagca tttttatttt
     6061 caaaaaaact caaataggga aataaaaaag tcccaataag tgtaatcaaa ggaaccatta
     6121 aagcagggat aaaaagttta tttttataaa tatttgcatg ttttatctcg tattcttttt
     6181 cttctttgct aacttcaatc tttgctggtt ttaataaatt aaatcctgct ataagtgcta
     6241 gtaaaatcac tatacaaccc atcacaaaat gaggcaaaac tcctgctagt aaaaaagtaa
     6301 aactataact tatccagaat accccgccgc ttattcttga ttttatatct ttagcttgat
     6361 tagaaaaact taaaattcca aaaactaaaa ataaaattcc tacaatataa taaagcaaat
     6421 caagacttat catcactcaa ccctttataa gttttttcta atcttttatc aaataaataa
     6481 agtctagaac aatggataat taaagccaaa attccagttg gtatagccca aactgataaa
     6541 tgcaatggct caacaataat accattgctc tcataaaaag ctttaataaa taaaatagaa
     6601 tgcacggcta taaaaatatc ctctccaaaa aatacagcaa cattatccgt tcccgcagaa
     6661 aaagctttga ttttttgact atctttatgt gttaagtttt taaatttaag cttagctgca
     6721 gcttctgcca taggggctat taaaggtctt atcatctgtg catgtccgcc taaagataaa
     6781 agccctaaag ctgcagtaac ttgtctaaaa acaaaataac acattaaaat tcgtcctgta
     6841 ctggcaactt ttattttgga tattaaattt ttagcctgct ctcttaagcc tttgcgttcc
     6901 aaaacagcaa gtaaaggtaa aataagccaa attatagcaa catagcgatt atctacaaaa
     6961 gattttccta tatcactaac aaccttaaca aaatcaaaac ctgaaacaag tccagcataa
     7021 attccaactg aagttaccac taaaaagggg ttaatcttta aagcaaaacc tgaaacaatc
     7081 aaaggtatag aagcaagaag taaccattcc atcaaccatc tccacaatat gaattagaaa
     7141 tattatagaa attttaaatt gaagaaaagt ttaaaaaaat atttttaaga atggaatgag
     7201 aaattaagta acaaaataaa ttttatataa atttaaaaaa gccttggaat agtccaaaag
     7261 ctttttttgt attatttgtt cgctctttct atatactcac cacgcacggt atcaacgcgt
     7321 ataacttcac cttctaacac atgaaaagga atttgcacta ctgcgcctgt ttccaatgta
     7381 gccggttttt tatttgatcc ttgagtatca cccttaaaat ttggagctgt ttcgatgatt
     7441 ttgagttcaa caacttgtgg aacttctacg ccgatagctt taccattatg gaaaagcacg
     7501 tctaccatca taccatcaat catccatttt tttgcttcac ccacatcttc atcactaatt
     7561 gctacttgct cataagtttg cgtatccata aattgacaat tttcaccatc atcataaaga
     7621 tactgcatag tcttatcttc taaatttgga gcttcacatt tatcccctgc atggaaagtt
     7681 ttttcaagta ccttaccatc gataaaagat ttgattttaa tacgcacaaa agcaggacct
     7741 ttacctggtt ttacatgctg atactcaact attttaaaag gaattccatc aatttctact
     7801 ttaagtcctt tttttaaatc acccattgaa taagatgcca taaatttcct ttagtaaaaa
     7861 aaataaaagg taattctatc aaattttaat tgatatcaca ataaaactgc tttatttgat
     7921 aaaaaaataa gcaaaattac gttaaaatct aaacttaaag catagtaaat gctcgcttct
     7981 tttttagaag aggaaagtcc gagctgctaa agacaaacat tccatctaac agatggctag
     8041 ggcaacctaa gggatagtgc aacagaaaga aaactaccac attaaagtgg aaaaggtgaa
     8101 acggcggagt aaaagcccac cagcgatttt ggtaacaatt tcggctatgt aaacccaatg
     8161 tgcagcaaga agggatggtt agtgtctttg ttttaaccct tcgcttgatt ttgtttgcaa
     8221 aaacaaaact agataaatga gcattcttga cagaactcgg cttatcgcta tgctttttaa
     8281 gatctaacat aggtcaaagc tttttgaaat ttttgaattt caaaagcttt agtttttttc
     8341 ttctgatcaa tcaatacaat agcttcttgc aaaagagctt gaagttgata aaatatatct
     8401 tttacgtttt cttttaacat ttcttctgaa ggttggcttt ttactaaatt tttaacaaaa
     8461 tttttcacat caagttcatc aagcaaaatt tcaagcttat caacatcttc ttgaattaat
     8521 gcaagtttaa aattattgag ccattgtttc attactatgc acttctctcc aagcttctag
     8581 caaacctttg gttacattga tcacttcatt gattctttct tcattatttt ctaaatttgc
     8641 taaagataaa agctggattt ctcttgtata aagcccactt aaataatgtg ccacatctcc
     8701 acctttttca taatctaaag tatttataag ctctataaaa atggctgtgg ttctttttac
     8761 aaaatacact ctttgctcta tatcttcatt tcttatagct actttagctc ttgaacaaaa
     8821 acgcaaaatc ccctcataaa gcatttcaat aagcttttgc ggagattcta tccccgcttg
     8881 gttttgagaa taagcattat aagctaaact attttgcatc tttttatcct taattattag
     8941 aattatttgc tgcattaatc atattagtta tagttgagag ctgctgatta agcttattta
     9001 agatactttc atactgcaac cattgatttg ccattgtatc atatcttgta tcaatcatag
     9061 cctgagttga gtctttagag gtatttaatg atttaatatc atttgtcaaa ctctcatcat
     9121 attttgtaat tgaaccatct tttccagtca tctcttgcaa cgtggctttt aattttgaaa
     9181 aaataccttt accttctata ggtttagagg ttatatttac atcagacaaa cctaattcct
     9241 taagaatggt agcatttcct ttgatggaaa aatccgaact accatctcca ctaaaattca
     9301 acttaaaccc tttaacaccg ttttgatcat aggattcaac cttaactttt aaaccttcaa
     9361 tacctttgct gtttatatga ttagctaaat tttgaagcaa ttcttcctct gtttttcctg
     9421 ttaatttaaa attagtacca tcagaatttt tagataaatc atatgtttga ttattaaaaa
     9481 ctatagtaaa atctcctggt ttaaaatcta aacctttatt gccagtgcca ctagaatcaa
     9541 gatattgatt caaacttccc tgcttaatta cttctcctgt gtgattaatg tcttcgtatt
     9601 tagtaatatt tgaaaaaaaa ctttcagtag agtctggatc ttctttaact ttttgttcaa
     9661 atttagaaga atcaaaactc aaagtgcctg catcatttaa acttaagcca aaatcctgca
     9721 tagaaagcat aaccttagtg ttcactttat taccatttgc atcttcagta gttccatcaa
     9781 caacttgaga atcaaacaaa tcagcaagaa tgcttgagcg tattgaattt acttcactga
     9841 tgccttgtaa agttcctttt gttccagttt cactattata gtcagttgca gcattaagat
     9901 tggttactaa atcattataa gcatccacca aatcttgcat ggcttttgtc acaccttcaa
     9961 aatcttgctg tacatcaaaa ttaatttcac ctgttttatt taaagttaaa gtcattccta
    10021 caccaagatc ggtaacagtg ttacttgatc taaacatctt aataccatca agtgtaaatt
    10081 ctgcattttg cgcagtttgg atatgcaaag aagcatcctt aataccataa ccttttttat
    10141 ccttagctgg atcaatagaa ctcgttgtat ctaattccca tccaagattt ttgaatattg
    10201 tttctgcctc tgaatcactt gtatacttac cattcgaatc tttttttccc gcatagaaac
    10261 ttatcgcact gtcttcgcct gtttctttac tggttaaagt taagcggtaa ggagtgcctt
    10321 tctctcctgt gtttacaatc ttagcaacaa tctctcctcc actagcttca ttaattttat
    10381 cagctaaatc tctataggtt gtgtttttat ctaccgtaac agtatattct ttgccatttg
    10441 aaaaaaaagt aagatcggtg gttccagtta aatttgcatt aataaaacca ctgtcatttg
    10501 ctaatccttt gctttgatac acatcttttt gtgcaagttg agtaacattg atattcatgc
    10561 tttgtaaagc aacacccgaa ttaactgtaa gacttgctgg aggattatcg ctaatacttc
    10621 ctacaacttt tcttttcgca aaaaccgtag catcggctaa tgatgaaaca gccgtctgaa
    10681 aacttagtaa tttagttttg atttctgtta aatctttttg tttggttgta ttttcttcaa
    10741 tttttttagt ataaggatca atacgagctt tttgctctgc ttcttttaat ttatctatag
    10801 tatcttgagt taaaacccca gaaccaaatc ctaaactaga tagactacca aatgccattt
    10861 ttaactctcc ttatcaaata tcattcctat cacatcccta aaatactcag ctaatctcat
    10921 agcttcttcg ctaggaattt gacggatttc ccttccagtg cttttttcag tcacgctaat
    10981 atacatagaa ccgattttat cactataacc aaaacgaaca ttggtatcta gagaatccat
    11041 ttgctcattt aacttttttg taatatcagc caacttttca ctcacacctc gttgctgtcg
    11101 atcatcgcct tcttggcctt gacttctatc ggtttgaatg tttaaactag cctgtgtctc
    11161 acttgttctt tggctaatgt ttgccaaagc tgtatccatt tgcccatttg ccttcgatat
    11221 ttccatttta aaatcctttt taaaatttcc tattgctagt taaaagctta tatcgacaaa
    11281 tttataaatt tatgaacacc tataaagaaa attttatttt tcaataataa aaaaataata
    11341 agcaaaaact gtgccaaaat tttaaaataa atctcaatta tcttaaaaaa tttcaaattt
    11401 attaaaaaga tctggattat tttctaaaat attacgcaag atcaaatctt ctatcacgct
    11461 tttagtgcaa tctgtttgct taggccaagc tcttaaataa ccctcagctt cacctttagc
    11521 acttgcatct actccaagtc tttcttcttt gataaaaata tctcttttag catctatatt
    11581 atttaccaca cgccaaacaa gcatataaga attttcaagc ttattttcag catctaaaaa
    11641 cactaaaatc ctaaaatgtt ttttaaattc taaaagtttg tcaaaacttt gttcgatttt
    11701 ttctttttta tcaagcaaaa tacaaactat aggactttta ctttctttat aaaattgctt
    11761 taaatttaaa agttctacct tagttttaaa aagttctagt aatttttcat cttctaaaat
    11821 ttcaagctct tcaacttgta tttcttcgca agcatcaagt cctgctttac ccccaaaaca
    11881 agaattaggt gaagcatgat ctaattgatc acaaattcct tctgaaatta aaattttctt
    11941 tgtattaaaa cgatctaaca tataaggaat taaagcatca taatctttca aagaaggtgc
    12001 atttttatcc acaaaaattg catgcttaac aaaactcatt tgccctactc cccaaaatgc
    12061 atgcataatt tgttgcgcat gagcgggata ttttgcatcg atttttgcta agataagatt
    12121 atgaaagacc ccattttcag gcatattata atcaattaaa tcaggtactg aagtttgaag
    12181 caaaggtaaa aaaattcttt cagtaccaag tcccatgatc ttatcttcta aaggaggctt
    12241 tcctacaacc gttgcttgat agatcgcatc ttttttagca taaatttttt ctactttcat
    12301 cacaggaaaa agttcagcag gagtgtaaaa acccgtatga tctccaaaag gaccttcgat
    12361 tttaaactct tctaaatcca cataaccttc aataaccaca tcactatcat aaggtataaa
    12421 aataccattt tcacaaggag taatttttgc aggagttttt ttaataaaac cataaagtaa
    12481 aagttcaaaa attcccttag gtaaaggtgc ttgagaacac caaatataaa gcggatctcc
    12541 acctatggct atacttacag gcattttttt aaaaccagca tttttgtatt cgtgataaaa
    12601 atttgcccca tctttatgaa tttgccaatg cattaaaagt tcatttttat cactcatttg
    12661 caaacgatac attccaagat tattttgagt tttatctaaa ttttgtgtat aaacttgccc
    12721 catggtaata aatttacccg catcatcttc ccaagttttt agtatgggaa gttcttcaag
    12781 tgagtttaaa atttcataat catacaaggc tttatttttt ttcagtcttt taggaggaat
    12841 atttttaaaa cttaacaaat tcataaaaaa atccattttt gctttaaaac tcgtaggaat
    12901 atgaagcttg gtgagttttg aaatttcttc agccacctct tcataatcac gtccaaaagc
    12961 taaatttaaa gccttttcat tgcaaaaagt attcatcaaa acaggaaatt tatattgttt
    13021 atttaatttt ttatctatag gatttttaaa taataaagcc ttcccttttt ctcctttttt
    13081 agcttctata taggctaaat gagcgatttc aagatctaca tctacaggtt cttcaattac
    13141 ccttaaaaga tcattttctt ttaaaatttg aataaattct ttcatatcat actctcagct
    13201 ttttttaaaa gttctttagc acctttagca ataaactcct tagccaaact ctctccaaaa
    13261 cctttaaaat cattcttttt aatcattctc ttatctttta aaatttcact tccatcgggt
    13321 agtccaagta ccgcacgcac gcaaatttca tctcccaaga gctctgcgtt aatacctata
    13381 ggaacttgac aacctccttc taaagtagca ataaattctc tttcaatgct tgtttcaatc
    13441 aaagcatttt catcatttaa acattttaaa agttctaaaa ttttttcatc atttatgctt
    13501 tctataccta aagctccttg agaagccgca ggaataagct catctttgct aaattcataa
    13561 acaaaattca cttgcttatc taagtttaag cgtttaattc ccgccattgc caaaataatc
    13621 gcatcaaaat cattattttt taatttctct atacgagaat tgacattacc acgcaaagaa
    13681 ataatatcta aatcaggtct taataataaa agctgcatct tgcgtctaag actagtagtg
    13741 cctatttttg caccttttgg caaagaaaga aaatctttat aattttgact tagcatagca
    13801 tcattgcttt gctctctttt acttaccgct gccaaaacta aaccttgagg aaaaaaacta
    13861 ggcacatctt ttaaactatg caccgctaag tgtgcttctt ttcttaacat actttcttca
    13921 agttcttttg taaaaagtcc tttaccacca atttttgcca aaggagaatc aagcaaaaca
    13981 tcgccttttg ttttaaaacc ttctaaaagc acttcaattt gatgtgtatt ttttaaaatt
    14041 tgggctacat gttcactttg ccaaagagct aattgacttt ttcttgttgc aataataagc
    14101 ttcattttct atcctctata atttcaacat caataatttc ttcattagaa ttttgatact
    14161 cttgcttggt gtattgatat tttgatttag ttattaattt caaagcaata ccaaagaaaa
    14221 atacaaaaat tccaaaaaca cttgtaataa tccctggaaa aacaagtaaa aaccctgcga
    14281 taacaaaaga aaattgtgtt aacatatcct ttaagccacc catttgaaat tcaagcatat
    14341 ttttccaaaa aattcccaat aaaaccgcac caaaaatcat actcaaaagt atgaaaaata
    14401 aaaaattacc aaaaccaaaa aacactataa aaagtatact tgcaataatt tcaagtacaa
    14461 ataaagggct taaacttaat ttataattca taacactttc tttttaagaa tttccataag
    14521 ttcatcagtt tttataagtt cttttatcaa accttctctt tggataagct ctatttcatt
    14581 cttttctaat cctttaccaa caactaacgc ataaggaaag cccataagtt caaaatcatt
    14641 cattttaacc ccaaaacgct catttctatc atcaagcaat acctctaatc caagattagt
    14701 taaatcctca taaagcttat tggcaaattc taaagccttt tcatctttga gatttgaaac
    14761 aataatttca agcacaaaag gagctaaagt tttattccaa atacatcctt tttcatcatg
    14821 acttgcttca gtagctacag ccaacaagcg tgaaacacct atgccataac atcccatgta
    14881 aaaaggctga cttttgccat tttcatctaa gaaatttgca ttcatcgctt tggaatattt
    14941 ttgtcctagc ttaaaaatat gccctacttc tataccttta ctttgtttta attttgctcc
    15001 acatttaaca cagcaatccc cttctttaac ttcaatcaaa tctttaaaac gatctttatt
    15061 taaatttaca acatcaatac cgattaaatg ataatctttt tcattcgcac ccataatcat
    15121 ttgcttttcg ttttcaagct caaaatctat ataaaaatct atatctttta atcccacaaa
    15181 acctataaaa ccagctacta agccagcttt ttccaattct tcttcgctcg catcgactag
    15241 ttcaagggca ctgcaagcat tttgagcctt aacctcttgc aaatcatcac ttcctcttat
    15301 aaaaaacaca actaatttgc tttcattttc ataaatagct ttttttacca ctgctttaat
    15361 cgtataaaaa gcattgattt taaaaaattg tgctaaagaa tctatagttt taatatttgg
    15421 agtgtgaaat ttacttgcat aatttgcttc aggacgctca tcttgacaag tttttttagc
    15481 tctttttgca gcttcaacat tagccgcata atcacaattt tcacaaatta aaatatcatc
    15541 ttccccattt tttgctaaaa ccataaattc cttagaacca cttccaccaa tagccccact
    15601 atcagcttca actgctctaa aatcaagccc cattctttgt aaaatttgag aataagtttt
    15661 atacataagc tcaaactcac gccctaaatc ttcttcatta gcatgaaaac tatatccatc
    15721 tttcattaga aattcacgac atcttaaaag cccaaatcta ggccttgctt catcacgaaa
    15781 tttaagtcca atttgatata aatgcaaagg aagttgttta tagcttgtga ttttgttttt
    15841 taccaaagaa agcatagctt cttcatgtgt tggacctaaa acaaattcat tttcttttct
    15901 gtctttaaaa cgcaaaagtt cttttccaaa aacattgtaa cgcccacttt cttgccacaa
    15961 acttgcagga gtgataaaac taagatttac ttcttgtgct ccagccttat ccatttcttc
    16021 tttaactata tttttaatct tgtctaaaac tctttttccc aaaggcaaga aattataaag
    16081 tccgctacca atttgttcta caaaacccgc acgcgttaaa aaaatatgac taggtaaact
    16141 cgcatctttt ggcgcttctt ttaaacttgg tgcataaaat ttagtaaatc tcatcattat
    16201 tctccatatc aaattcacat ttatattgat ttaaaccttc aagattattt tgcaaatcaa
    16261 aaacataacg catagcatta atcactgtat cgctttgcat tttaccttgt aaatgtttca
    16321 aatttacagt aggcgtgtgt aaaaaagcct taaaaacttg atgaatcaac tttctagcct
    16381 cttctttatc agattttttc aaatatcctt tttttaacgc aatttcaagt tgtttatctg
    16441 catattcttt agcttgcaag cgtatagctt tgataatagg catcaaagcc aaatcgttta
    16501 aatacctaaa aaattcactt gttttacgac ctattatccc ataagccata cgagcttctt
    16561 gttctcttag tgctaaattt ttttgaacca caatttcaag atcatctaca gcaaaaacag
    16621 atatattttc attttcattg atatcaatat cccttggaac tgcaatatca aaaaaatacc
    16681 ttttataaga aagttcttct attaaagaat ttgtaataat agcatttggt gcattggtag
    16741 ctgagaaaaa aaactcgtat tgatttaaat atttttttaa attttctaaa ctatcatatt
    16801 cgcttaaaac accaagtctc tcacacaaat ctttagcttt ttgtaaatca cgatttaaaa
    16861 taatcacctt agcacccgca gcaattaaat gttttgccgc aagttctccc atctctccag
    16921 ctccaataac aacagctttt ttttgcgtta aatctgcaag ttcttttgct tttgccacgg
    16981 caacgctagc tacagaaata gaatttttag aaatttgagt ttcattgcgt accttagcag
    17041 cacatttaaa agcactatgt actgctcttg aaaggtgtac tccacaaaaa ttatttttta
    17101 cagcaaaagc aaaggcatct tttaattgtc ctgctatctg agtttctcca accaccaaac
    17161 tatccaaaga acttgctaca gaaaaaagat ggtggattgc tccactatct tcaaaaatat
    17221 cagctttttc aagtaaaata tctttatcaa catcacaaag taaagccaaa gatttaacaa
    17281 taaactccgc acaggccatt tttacaaaag caacaatttc aacacgattg caagtgctta
    17341 taaccaaaca ttcttcaata ttttcatgag tgctaatgat ttttaaaaac tcactttttt
    17401 tagcttcatt ggaaaagctt aacttttccc ttaaggcaat atctgtattt ttatgagtaa
    17461 aagatataca ataatacatt aaaattccct atctatcata gctttaataa tatcattaag
    17521 cttgttatta tcatattttt caattgcttt tctagccttt tttgcataag ttttagcttc
    17581 taaaatagct ttttctaaag ctttttgttc ttcaaattta gtttttagcc attctttttc
    17641 attttcattt aaatcttttt taaataaagt ctgcaaatat atcctatctt gttcttgtaa
    17701 attttcataa agataaatat aaggcaaggt agttttaccc tctttaaaat cattcatagc
    17761 aggttttcca agaatttttt catcactctt aatatctaaa atatcatcaa tcatctgaaa
    17821 agcaagtcct aaatttttac catattctgc aaaatctttt tcatataatc cagccaaaat
    17881 agctccgcat ctagcacttg cttcaatcaa aacagctgtt ttattataga tcattttcaa
    17941 ataagcttct ttattgatat taaatttctc tcccaaatca acatccataa gttcgcctat
    18001 agcaagcttt acaacagcat ctgaaataat acttgcaaat ctagcatcca ttttgcttaa
    18061 ttcataaaag gcttttgaat acaaaatatc gcccaacata agagcatttt ttgtaccaaa
    18121 ttcagcatta acagatcttg ctccacgtct taattcactc tcatcaataa tatcatcatg
    18181 taataaacta gcaagatgta tcaattctat agctgcacaa attttaaaag caatctcact
    18241 ctcatctgcg atagctaata ataatttaga acgtaatttc tttcctgatt ttacatttga
    18301 aagcatattt aaaataggtt catagccaag ttcttctaaa aactgtttta ttaattcatc
    18361 tattttttgc actatctttt ccttgttaat tgctattatt attttcttta cttgttaatg
    18421 gttttacctg aggttcgtta aaattaatca taggaacaac ctgattattt tgcggtggat
    18481 tttgtaaagc tttttttctc ggatctaaaa attctaccat taagcgagat tccttatctt
    18541 ctatataaac cgtaaaagtt gccaaacctt tattataacc actaaattct aaaataagtc
    18601 ttgctctatc aatatgtgga ttagtataat caggtattaa agtttgagtt acccaatcta
    18661 aatttcttct taaactcatc acaaattgac gcggatattt gcgaaatttc gaatgtacga
    18721 tgatattagt attatcaaac aaagtccaat aaaaatcaaa attttgcacc ttatcttcat
    18781 agcctatttc tttaatctgc acactagctc tctcatcttt tttaagtata aatttataag
    18841 tataatcaaa agttggttca gatgctaaaa cattactaaa aataaaaaaa atacaaatta
    18901 aataggggct tattttaaac aattttagcc ttcgtgtcct aaaatttttg cgcccaattc
    18961 tatataaata tcattttgcc tttcttctat gaaatcacca ttttctaata tgaaattttt
    19021 tacatccatt tctgttagac cttgtttttc caaaagttcc accatagcaa tatgatcagc
    19081 aaaaaattcc tcaaaaactt tttctaaggc tcctaaattt ccattttgta taatttctat
    19141 aaatttttct tttggagttt tattaaacat ttcatcaaaa
//
LOCUS       DARATF010000027        18515 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.027, whole genome shotgun sequence.
ACCESSION   DARATF010000027 DARATF010000000
VERSION     DARATF010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18515
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.027"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            22..3510
                     /locus_tag="SB502_000724"
     CDS             22..3510
                     /locus_tag="SB502_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEG0434188.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFNYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYKYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYIN
                     IGIASHNIFEIAYVYTRISEVGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYESKKFSNESDTDFILAQNRAWAKEIKTKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVT
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDSGI
                     PKDALIFLPSKGSDISKYLLIDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYHDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLEDNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGIKKSAIGLGRKVGIYNYITQFLEVKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFMNNLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVVLGANIANIDLSISYDEQDVSIIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            3528..4997
                     /gene="putP"
                     /locus_tag="SB502_000725"
     CDS             3528..4997
                     /gene="putP"
                     /locus_tag="SB502_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEG0434189.1"
                     /translation="MEVVQINTPIAVMFVAYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGVISIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHVVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLAASAVIIIASLFTNVRSGTKAAYEKMLKEL"
     gene            complement(5013..5240)
                     /gene="yedF"
                     /locus_tag="SB502_000726"
     CDS             complement(5013..5240)
                     /gene="yedF"
                     /locus_tag="SB502_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEG0434190.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(5244..6452)
                     /gene="yedE"
                     /locus_tag="SB502_000727"
     CDS             complement(5244..6452)
                     /gene="yedE"
                     /locus_tag="SB502_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HEG0434191.1"
                     /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKSKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWTYRAFEGQSHFMIV
                     GIANIIGTMILALSYDFLPKALKEGVKINLLTEFGNLNGFFINLVLFILMFAFVVFYK
                     KHFFKNQLKG"
     gene            6592..6689
                     /locus_tag="SB502_000728"
     tRNA            6592..6689
                     /locus_tag="SB502_000728"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6626..6628,aa:Sec,seq:tca)
     gene            6717..7967
                     /locus_tag="SB502_000729"
     CDS             6717..7967
                     /locus_tag="SB502_000729"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEG0434192.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKHAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALIK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYTTRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            7964..8392
                     /locus_tag="SB502_000730"
     CDS             7964..8392
                     /locus_tag="SB502_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HEG0434193.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIAELRSNLSMAQVGREALARAREKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            8385..8903
                     /locus_tag="SB502_000731"
     CDS             8385..8903
                     /locus_tag="SB502_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HEG0434194.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEKQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            8996..9547
                     /locus_tag="SB502_000732"
     CDS             8996..9547
                     /locus_tag="SB502_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HEG0434195.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            9547..10665
                     /gene="carA"
                     /locus_tag="SB502_000733"
     CDS             9547..10665
                     /gene="carA"
                     /locus_tag="SB502_000733"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEG0434196.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVS
                     TKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            10662..11321
                     /locus_tag="SB502_000734"
     CDS             10662..11321
                     /locus_tag="SB502_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEG0434197.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYNLFRIFAYIVLGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     EGMLVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAF
                     Q"
     gene            11318..12529
                     /locus_tag="SB502_000735"
     CDS             11318..12529
                     /locus_tag="SB502_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEG0434198.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHV
                     NINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITINFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EIFLKLKERVE"
     gene            12532..13212
                     /locus_tag="SB502_000736"
     CDS             12532..13212
                     /locus_tag="SB502_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0434199.1"
                     /translation="MSQECKELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIYSGGEIVLTKK
                     ELAFISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            13338..14804
                     /gene="ccoN"
                     /locus_tag="SB502_000737"
     CDS             13338..14804
                     /gene="ccoN"
                     /locus_tag="SB502_000737"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEG0434200.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            14817..15482
                     /gene="ccoO"
                     /locus_tag="SB502_000738"
     CDS             14817..15482
                     /gene="ccoO"
                     /locus_tag="SB502_000738"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEG0434201.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            15487..15750
                     /locus_tag="SB502_000739"
     CDS             15487..15750
                     /locus_tag="SB502_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HEG0434202.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYLYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            15750..16613
                     /locus_tag="SB502_000740"
     CDS             15750..16613
                     /locus_tag="SB502_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0434203.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSRGE"
     gene            16610..16831
                     /locus_tag="SB502_000741"
     CDS             16610..16831
                     /locus_tag="SB502_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HEG0434204.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLAILAVLTIWSLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            16828..16929
                     /locus_tag="SB502_000742"
     CDS             16828..16929
                     /locus_tag="SB502_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434205.1"
                     /translation="MSKALEYLIVIGLVVAAAITAWSVLTVNHLHIG"
     gene            16926..17528
                     /locus_tag="SB502_000743"
     CDS             16926..17528
                     /locus_tag="SB502_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434206.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            17515..18036
                     /locus_tag="SB502_000744"
     CDS             17515..18036
                     /locus_tag="SB502_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEG0434207.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSNDLKVQVLLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            18033..>18515
                     /locus_tag="SB502_000745"
     CDS             18033..>18515
                     /locus_tag="SB502_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434208.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLALLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVY
                     D"
BASE COUNT         6553 a         2235 c         3456 g         6271 t
ORIGIN      
        1 ttttatctta ggagatacga aatgatacaa aaagctttag ccttagctga agaattgcaa
       61 ggacaaatag aagccaatat ttcaaattct gaaaaagaat tccatgctaa aatgcaaaaa
      121 cttcttaata atcccaaaaa taaagttatg cttatagagc ttttagatcg ttcttttaga
      181 tgtaaagata aaaatgcaag ttttgagctt atagaatata ctttgagtaa atatggcata
      241 gcggattttt ttagcacttt tgaaaaattc ctacttttta gctttttaaa ttttggcaaa
      301 tttgctccta atttaagtgt accttttttt gtcaaacatt taagagaaga tactaaagct
      361 atggttctag atgcaaatcc tagtgtttta gaaccacata ttaagaaaag aaaagagcaa
      421 gataaaatta ccttaaatgt gaatttaatc ggcgaagagg ttttaggtga agctgagagt
      481 aaatatcgta tgcaaaaata cgaagaagcc ttaaaatcaa gctatatcac ttatatttcc
      541 ataaaaatta ctactatttt ttcgcaaatt aatattatag attttaatta ttccaaagaa
      601 gaggtcgtaa aaagactaga ttatctttat gctttagcct tagaagaaga gaaaaaacaa
      661 ggtgtatcta aatttatcaa tcttgatatg gaagaattta gggatttaga gctcaccgtt
      721 gcagctttta tggaaagtgt ggctaaattt gatattaaag cagggattgt tttgcaagct
      781 tatattcctg attcttataa gtatcttaaa aaactttttg ctttttcaaa agagagggtt
      841 ttaaaaggta tgaagcctat taagatccgt tttgttaagg gtgctaatat ggaaagtgaa
      901 gaaaccattg cgtctcaaag gggttgggag cttcctactt tttacaaaaa aatagatact
      961 gatagtaatt ataataaaat gcttgatttt attcttgaag gagacaatta taaatacatc
     1021 aacataggaa ttgcaagtca taatatcttt gagattgctt atgtttatac acgtataagt
     1081 gaagtgggtg ctttggattc ttttactttt gaaatgcttg aaggtatgag tttgcaatgt
     1141 tcttatgaat tatctaaaat gcatgatcta atcctttatg ccccagtttg cgatgaagca
     1201 cattttaaca atgccattgc ttatcttgta agacgccttg atgaaaatac aagtgaagat
     1261 aattttatgc gttatttttt caatcttaaa gtaggagata aaaactggaa tatccaaaaa
     1321 gaactttttt taaaatcttt agaaggcata aaaactcttg ataatactac acatcgtaag
     1381 caagatagaa ataaagaatc aaatatcata agttcttatg aaagtaaaaa atttagcaat
     1441 gaaagcgata cggattttat tttagcgcaa aatagagcgt gggctaaaga aattaaaact
     1501 aaatatgaaa atttaaaaga ttatgatgtt tatcctgtta taggcgaact tgattttaaa
     1561 gcagaaaatt taaatgtttt agaagttaaa gataagatcg aagatagagt tataggaaag
     1621 gcttatttag caggagaaaa agaaatcaaa caagctttag aagtagctaa aaattccaaa
     1681 tttacacaaa aaagtcatga tgaaatttat caaattttag ccaaaagtgc aaaactgatg
     1741 agagaaagaa gaggggattt gataggtttg gcagctttag aagtgggtaa aaccttttta
     1801 gagatcgatc ctgaagtaag cgaggctatt gattttatag agttttatcc gcactcttta
     1861 gaagagctta aaaaacaaaa tccaaaagtt acattcacac ctaaaggtat aggggttacc
     1921 atagctcctt ggaattttcc tataggaatt tcagtaggta ctatagctgc accactagcc
     1981 gcaggtaatg tggtgattta caaaccttct tcactttcaa ctctaacagg ttatatgctt
     2041 tgtaagtgtt tttgggattc gggtattcca aaagatgctt tgattttctt accttcaaaa
     2101 ggaagtgata tttctaaata tttacttatt gatgaagcga ttaaattttc aattcttaca
     2161 ggaggagagg atactgctta tgctatgtta aaagctaatc caaccttgct tttaagtgct
     2221 gaaactggcg gaaagaatgc gactatagtt tctaaatttg ctgatcgtga tagtgcgatt
     2281 aaaaatatca ttcattctgc ttttagtaat agcggtcaaa aatgttcagc tacttctttg
     2341 ctagtcttag aagaagaggt ttatcatgat gaagaattta aaaagacttt agtggatgct
     2401 gcgagttcta tggcagtggg caatcctttt gaatttaaaa ataaattagg tactttagct
     2461 gataagccaa gttctaaagt tcaaaaggcc ttagatgaat tacaacctta tgaagaatgg
     2521 gcattaaaac ctaagttttt agaggataat ccttatttga tgactccagg cataaaatat
     2581 ggcactaaaa agggtgattt tactcatatg aatgaacttt ttgtaccgat tttaagtgtg
     2641 atgaaggcta aagacttaaa agaagctatt gatatagtaa attccacagg ttatggttta
     2701 actgcaggtt ttgaaagctt agatgaaaga gaatgggagt attttcacac tcacatagaa
     2761 gcaggaaata tttatatcaa taaaccaacc acaggggcta tagtgctgcg tcaacctttt
     2821 ggtgggatta aaaaatcagc tataggtttg ggtagaaaag tgggaattta taattatatc
     2881 actcaatttt tagaggttaa gcaagaagat tttgatgatc atttaattga agataaattt
     2941 tcaaaaaaat tagcacaaat agatttaaaa gaagcacaag attttatgaa caatttaatt
     3001 aaaatgtctc aatcttatgc ttatcattat aaaaacgagt ttagtgtttc aaaagattat
     3061 gtcaatattc gtggagaaga taatcttttt tcttatacta aaataaagaa tatggtttta
     3121 agactttgtg gaaatgaaag cttaaaagat gttttaggtg tggttttagg tgcaaatatt
     3181 gcaaatattg atctaagtat cagttatgat gaacaagatg ttagtataat agaacgaatt
     3241 gttcaaagca taggagcaaa agtattgttt ttaaaagaaa ataaagaaaa ttttatcaag
     3301 agtattaaag aatatgaaag agtgcgttat ttagcaaagc cagatgtaaa tgatgagatt
     3361 tataaagagg ctgcaaagct tgctaaaatc attataagag aaaagccatt attaaatggt
     3421 cgttttgaac ttttaaatta ttttaatgaa aaagctttaa gtatatcttt tcatcgttat
     3481 ggaaatttag gcattagagc aatatcttaa tgatcaagga gagattgatg gaagtggttc
     3541 aaattaatac cccaatagca gtgatgtttg tagcttatgc cttattaatg ctttatatag
     3601 gtttttattt ttataaacaa aataaaaatt cagaggatta ttttctaggt gggcgtacta
     3661 tggggcctgt gatatctgca cttagcgcag gggcttctga tatgagtggt tggcttttaa
     3721 tgggtttacc gggagcttta tatgtaagtg gttttataga ttcttatatt gcaattgggc
     3781 ttactatagg agctagttta aattggattt ttgtggcaaa aagacttaga atttatacca
     3841 gtgtgattgc aaattctttg actattcctg attattttga aactcgtttt gatgatgata
     3901 aacatatact gcgcatcgta tgtgcggtgg taattttgat attttttacc ttttatgttt
     3961 catcagggct tgtaagcgga gcaaaacttt ttgaaagtac ttttggtatc agatacgatt
     4021 atgctttaac tactggaacg attattattg ttgcttatac ttttttaggt ggatataagg
     4081 cggtttgttg gacggatatg atacaagggc ttttaatgat gatggcttta attattgtac
     4141 ctttggttat gctttatcat ttaggtggct ttggtgaagc gatgaatata gtaagagaaa
     4201 taaaaccaca agctttatct atgggcgaag gagtaggagt tataagtatt atatctgcac
     4261 ttgcttgggg tttgggttat tttggtcaac cacatatttt agtgcgtttt atgtcgattc
     4321 gttctactaa agatattcct atggccactt ttataggtat tgcttggatg gcggtttgtc
     4381 ttttaagtgc ttgtatgata ggtattttgg gcatagctta tgtgcataaa tttgaattaa
     4441 gtttgcaaga tcctgaaaag attttcatcg tgatgtcgca gcttttattt aatccttgga
     4501 tagcaggtat tttactcagt gctattttag cagctattat gagtacagca agttcacaat
     4561 tgctggtttc aagttctact atagcggaag atttttataa aaagattttt agagaagatg
     4621 cgccaagtca tgttgtatta aatttaggta aattaggtgt tttattggta gctgtaatag
     4681 cgtttttgat ttctactgat aaaaactcaa gtgttttgag tatagtttct tatgcatggg
     4741 ccggatttgg agcttctttt ggttctgtaa tgcttttttc tttattttgg agtaggatga
     4801 caagagtagg agcaatctta ggtatgataa caggagctgc tactgtggta ctttggaaga
     4861 attttgcaaa ttcgggtctt tatgaaatag ttccagggtt tttagcagct tcggcggtga
     4921 ttattattgc aagtttgttt acaaatgtaa gatctggaac taaagcagct tatgaaaaga
     4981 tgttaaaaga gctttgagaa caaaagcctt ttttaaggct tttgtattaa aaatcttagc
     5041 gtgggtccac tttgatcgat ttcaagcact ttaaaaccac ggttttttgc atcttgaggt
     5101 atggaattga tactttgtgg acaatcacaa agtacttcta aaatttctcc acttttaagc
     5161 ttaggtaaga catcaagtgt tgctatagca ggataagggc aagcttcacc ttgcaaattt
     5221 aaactataag taattttcat tgtttatcct ttaagttgat ttttaaagaa gtgttttttg
     5281 taaaatacca caaaagcaaa cattaggata aataaaacaa ggttgataaa aaatccattt
     5341 aaatttccaa attcagttaa aagattgatt tttacacctt ctttaagagc ctttggtaaa
     5401 aagtcataac ttaaggctaa aatcatagtt cctattatgt ttgcaattcc tactatcata
     5461 aaatgacttt gtccttcaaa ggcacgataa gtccaaccac actcacaacc tccggcaaaa
     5521 actataccaa aaccaaataa aaatgccccc acagctacag caggagaaag ttctatgagt
     5581 ttactagtat gaccctgcaa gataaaagca aaagcgatta aagaggcgat aatcataccg
     5641 attaatgcgc cttttatagc attatctcta ccaaataaaa ataaatctct aaagcaagaa
     5701 gtaaaacaaa tttgccccct agaaataaca aaaccaaaaa caaaaccaaa aatcagtgct
     5761 aaagctagaa gactttgttt gttttgtgtg ctgatattgc catttgtaaa aacaagataa
     5821 aacacccaaa ccaaaaaggc tatgaaaagc aatatgccta agttaaaata tagttttgta
     5881 cgcaaacttt gcttgtttag cggcaagttt tctttattta cccgttctaa tttagcttta
     5941 gatttaaaaa aggaagtgtt gcaaattttt actcctagat aaattcctaa aaccataaaa
     6001 acagtaaaaa gccaagtgtg taaagaaaaa taaggtaaac ctgtaaaaaa attagctaaa
     6061 ttgcatccaa atgcaagtct tgctccatat cctgaaagaa ttccacctac tattgcttga
     6121 aaaattctta tattgctagc aggtagacga aatttgactt tgttagctaa aagtgcggct
     6181 actaaacaac ctataaacat acctatgagc ataataccat cagttcttgt taaaggggtt
     6241 ccatttaaat tttgcttttg gtaataagaa tatccatcta aattcatacc taaaagttct
     6301 aaaaattcac caccccaacg cgtcatttct ccagtaacag cccaaactcc accaaaaatt
     6361 ccaaaataca ctgcacttaa aattccaagt gcaatcatag aacgggaatt gtcccaaaaa
     6421 ttgattaaat atttttgttt aaaagaattc aaagaaagat cctaaaaatg taatcatcaa
     6481 aacttgatgc taaaaaagag tgagattata gcttaaattt aatgtgaagt caaaaagaat
     6541 attgataaat ttattttgtt tttcattaaa aatcgctata attatcactt tggaagatta
     6601 gcgtatctgg tgatcgccac tgacttcaaa tcagatgaaa ggatagttga ctattctttg
     6661 gggagttcga ttctctcatc ttctcgccaa tattaagtaa aatcaaggaa atttttatga
     6721 gcaaagcaga tattattgtc ggcattcaat ggggcgatga aggaaaaggc aaggtagttg
     6781 ataaattatg tgaaaattat gattttgttt gcagaagtgc aggtggacac aatgcaggac
     6841 atacgatttg ggtaaatggt gtaagatatg cgcttcatct tatgccaagt ggagttttgc
     6901 atccaagatg tattaatatt atcggaaatg gagttgtggt ttctcctgaa gtattgatcg
     6961 ctgaaatggc tcaatttgaa aatttaaaag gtagattata tatcagcgat agagctcatt
     7021 taaatttaaa acatcattct ttaatagaca ttgcaaaaga aaaactcaaa ggcaaacatg
     7081 ccataggaac aacaggtaag ggtataggac cttcttatgc agataagatt aatcgtacag
     7141 gacatagagt tggagagctt ttagaaccac aaagactttg cgaggctttg ataaaagatt
     7201 ttgaagctaa taaaactttt tttgaaatgc ttgaaattga aattccaagt gctgaagaat
     7261 tgcttgctga tttaaaacgt tttaatgaaa ttttaactcc ttatattaca gatactacaa
     7321 gaatgctttg gaaggcttta gatgaagata aaagagtact tttagaagga gctcagggct
     7381 ctatgcttga tattgatcat ggaacttatc cttatgttac aagctcaagt actatttcag
     7441 caggcgcttt aacaggactt gggttaaatc ctaaagaagc gggaaatatt ataggtattg
     7501 taaaagctta tacaacgcgt gtgggaaatg gagcttttcc tactgaggat aagggtgaag
     7561 atggagaaaa aattgcgcaa attggaaaag aaattggcgt aagcacggga cgtaaaagac
     7621 gctgtggatg gtttgatgca gttgctgtaa gatatacagc aagacttaat ggtcttgatg
     7681 ctttatcttt gatgaagctc gatgttttag atggttttga aaagataaaa atttgtcgtg
     7741 cttatgaata taagggcatg gaaatcgact atataccaag cgatttagaa aatgttcaac
     7801 ctatttatga agaaatggat ggttgggata aagtttttgg tataaaagat tatgatttat
     7861 tgccagaaaa tgctaaaaaa tatatagcaa gacttgaaga gcttgcaggg gttaaggtaa
     7921 agtatatttc tactagccct gaaagagatg atactatcat cttatgaaaa gtaaatataa
     7981 ttctgttgta aaggtaagaa aacaacaact tgataaagca gaatcaaatc ttaatcaagc
     8041 caaacaaaga cagcttgaac atgaaaaagc ttatgaactt tcacgccaag agtgtgaaag
     8101 tttaggcgta ttgccaaaat caggatctat agcagagtta agatcgaatt taagtatggc
     8161 gcaagtagga cgcgaggctt tggcaagagc tagggagaaa gtagaacttt ctaaaaaaga
     8221 aatgaatcat tatcagtttt tatatcaaaa agcacattta gattatgaaa aaatgaaggt
     8281 tttagaagcc gaggaaatta aacaaaagca aaaagaactt gccaaggctg aagaaaaatt
     8341 tttagatgaa attgcaatca gtcgtttttt caaaggagaa aaagatgatt aaaaaattta
     8401 tattgttagt ttttatttca agtgtagttt ttggagctga acaagattgt gagcagtatt
     8461 ttgaagctag aaaagctcaa attgaattgc aaactagaga atttgatgaa gcaagacaat
     8521 ctttagaagc ttataaagcc tcttttgaag ctttgcaaaa agaaaggctt gaaaatttag
     8581 aaaaaaaaga ggctgaggtt aatgcaactt tggcaaaaat tgaagaatta aagcttgaaa
     8641 acgcaaggct tgtagaaaaa caacaaaaga ttttaaattc aatcaatgat aaaactcaag
     8701 gtagggttaa agaaatttat tcccaaatga aagatgcagc cattgcagat gttttaagtc
     8761 aaatggatgc agaggatgca agcaaaataa tgctttcttt ggaatcgcgt aaaatttcag
     8821 gtgttttatc taaaatggat ccaaaaaaag ctagcgagct tactttgctt ttgaaaaatt
     8881 tagataataa tgctagtaat taggtgatta aaataatgaa aatttttcat ttttaacatt
     8941 cttttaccaa aaataagcta ttatttcaaa cattatcaaa taaaaggttt ttaagatgcg
     9001 tataaaatta ccacatattc cttatatcgc aaataaaatg atgttagata tagctaattc
     9061 ttcttttgta gaaattaaag atcaattaga aaagcttaag gtatgtataa tagaagtttt
     9121 agagaaagat attctaaatg aaagaaaatt agatgaaaga gtaaaagagc ttttagagca
     9181 acaagaagat gaaatggagc ttatgcaagt agatcgtaaa aatatgtttt ggcttgtgaa
     9241 gaaaaagtta gctcctgaat ttaatgtgat tttagattct gaagatagac ataatcatct
     9301 agcgcatcaa attttagaag aacttgtaga gaatgattat attaatttta tagtgagtga
     9361 aaatagagtt aaaaatttaa tcttttcaag catagagtct tatcttaaaa tttatgaaaa
     9421 acttgaagat gaggtttatg agaaaattag caattataaa acaaaaccta ttccaggtag
     9481 cgaagagtat gatcttatct ttgaaaaact ctatcaagaa gagctcagaa aaaaaggtat
     9541 gttttaatga aggcttatat ttatttagaa aatgatattt ttttaagtgc taaggctttt
     9601 ggaaagagcg gtactttttt tggagagctt gtatttaaca cttctttaac agggtatcaa
     9661 gaaattattt cagatccttc ttatgcaggg caatttatcg tattttccat gccagaaatt
     9721 ggtatagtgg gaaccaatga aaatgataat gaaagcaagg aaatttttgc aagtggtgtt
     9781 ttaatgcgtg aattaagttc cagtttttca aattttcgcg ctaaagaaag tctgcaagat
     9841 tatcttgaaa aacatggaaa aataggaatt tatgaacttg atacgagata tctagtaaaa
     9901 atgataagaa ataatggcaa tttaagagct gtaatttcaa ctgaaatttc aaataaagaa
     9961 gatttaaaaa tcgccttaga aaaatcagca aaaattgatg aagtaaattt tgtaaaagaa
    10021 gttagcacta agaaaaatta ttctcataaa caaggcgttt ggaacgctag ttttcaaaaa
    10081 tttaatgatg ctaaaagaag tgagaaaaaa gttgctgtta tagattatgg tgttaaaaca
    10141 aatatcttaa atgaacttgt agaagtaggt tttgaagtag aagtttatcc atataatgtt
    10201 aaagcagatg agttgattac tctgtataaa aaaggtgaaa ttcaaggcgt gtttctttct
    10261 aatggtccag gtgagccaag gattttaaaa caagagattg cagagattaa aaaacttgca
    10321 gaagctaaaa ttcctatgct tggaatttgc ttaggtcacc agcttttaag taatgctttt
    10381 ggatatgaaa cttataaaat gaaatttgga caacatggag caaatcatcc tgtgatcaat
    10441 cttgatacaa aaacggtaga aattaccgca caaaatcata attataatgt tccagaagaa
    10501 ttagctcaag tggctcatat cactcataga aatttatttg gcgataatgt tgaaggagta
    10561 agatataaag actatcctat tatttcagta caacatcatc cagaaagttc ttcaggtcct
    10621 catgaaagta agtatatttt taaagaattt atgaatttga tgtgagtata gattttttag
    10681 ctattatcag cgttgctttt ttatctagtt ttggacactg ctattctatg tgtggtggtt
    10741 ttaatttact ttttataaat ttgaattcaa aaagcaataa tttattttta ttaactttta
    10801 tttataattt gtttagaatt tttgcttata ttgttttagg gataattttt gggacttttg
    10861 ggaatatctt ggcaatcaat gctaaggttc aaagtttgtc attttttatt cttggtatat
    10921 ttatgatgat tttgggtttt gctcttattt ttagaggcaa tatgttatct tttattgaaa
    10981 ataatgtttt ttttgatagt tttgtaaaga aaattattaa aaaatctaaa aattttaaag
    11041 gattaaaatc agccatattt ttaggatttt caaatggttt tgttccttgt ggattggtgt
    11101 atttttttat agccaatgca atgagtaagc aaaatatttt tgaaggtatg ttggtaatga
    11161 tgatttttgg aatatcaact ttacctgcga tgttattttt ttctaaaatt tcacagtttt
    11221 ttagtgattt tttgaaaaat ttatttaatt atttatcgta tggcgttatt gtttgttacg
    11281 gtataaatct tgcctatata ggttttaagg cttttcaatg aaagattttt ttaaagatca
    11341 gttttttaaa gctcttgaaa aaaatacaat tttttcaaga gctgatgttc aaggaaattt
    11401 aatttttgtc agtgataagc tttgtcaaat aagtggatat agtaaaaaag agcttatagg
    11461 aaaaaaacat tcaatattta aacatccaga tgttgaggaa tgttatattg aagaactttt
    11521 aaaaaaactt tcatataaaa aaccttatca agttattttt aaaaatattg ataaattagg
    11581 caaaactttc tatcttgaaa ctttattaat ccccatattg gataaaaata atgaattaat
    11641 agaaatagta gcattctctc atgatgttag taattctttt aagcttaatg aagagcttgc
    11701 tctaaatcac gctaaattaa gagaattaag tattaatctt gaaaatacag ttaaaaatca
    11761 ccaacaagaa tttatacagt taggtaaaaa atttgagaaa aaaatgcaaa ttgccttgga
    11821 aaaaaatgaa aaagatatta aaatagcata tgaagagatt ttgaaatctt cattagaaca
    11881 aatgattagt gatatagcac atcaatggag acaaccgtta aatgagctcg gtattgccat
    11941 gtttcaaatg aagcaaaatc ttaaagatga aaaaggattt gctgaaattt actcacaatc
    12001 aaaagatatg attaaaaata tgtcagaaac aattgatgtg tttagaactt tgtttaacaa
    12061 aggagtagag cagtgtgtat ttataaaaga gactttaaat aaagccttgg aaattgcttt
    12121 tgaaactata gaaaaaaatc atgtaaatat taatattgtt tcgaaaagtg attatgaagt
    12181 tttggcatat gagaatggtt taataagagt ttttcttaat ttgattttaa attcaataga
    12241 agcatttaaa aacaaaaaaa ggaaaatcat aacaataaat ttttcaaaat ttggaaaaaa
    12301 ttatctgaaa attacaataa aagataatgc tggtgggatt gataaagaaa atttagataa
    12361 aatttttcaa ccttatttta caacaaaaca tcctagtcaa ggtataggag taggacttta
    12421 tataagtaga caaattatcg aaagtttcca aggaaaaata aaagttaaaa atggaaaaga
    12481 cggggcttgt tttgagatat ttttaaaact aaaagagagg gtagagtaga aatgtcacaa
    12541 gaatgtaaag aattgataat attagtagtt gaagatgagg ttaaggctag agaatcaatg
    12601 attaatatat taagcgaacg ctttagtaaa gtaatcggag ctcaaaatgg agatgagggg
    12661 cttaaaaaat ttaaaaaatt taagccagat ttagttatca cagatattgc tatgcctatt
    12721 atggatggac tggatatggc aagagagatt aaagaaattt cagatgatgt cccaattgtt
    12781 gttcttagtg cgtattcaga gaaagagaga cttttgcgtt ctattgatat tggtatagat
    12841 aaatatttga ttaaacctgt tgatatagaa gagttgttta aagttttaga ttatctgata
    12901 ggtgaaaaaa ttgaagcaaa tatgcttgta aaaatttctg aagaatatca atttaacaaa
    12961 actaaacgaa ctttaattta cagtggtgga gaaattgttt taactaaaaa agaattggct
    13021 tttatttctt tgcttttaaa gcaacctgga gctttggttt tgcatgaaga tattaagaaa
    13081 aatgtttgga taggtgaaca tgtgagcgat actgctgtta gaacttttat aaaaagagta
    13141 agagataaag tgggtgaaga ttttataaaa aatgtgccaa gtttaggtta taagataaat
    13201 atcaataaat aagactgatt tagccttaaa atataaaaca taacaaatga ttaacaaaat
    13261 tatcattttt aagaaaaaat gtataattaa tattctataa tattctcttg ttatcaaaaa
    13321 ttttaaggag aaagtcgatg catccaggta atgtattaaa ttacgactat acggttgcaa
    13381 gatattttat gtttgcgacc atattgtttg gcattgttgg tatggctata ggaactctta
    13441 tagcttttca aatggcatat cctaatttaa attatttagc aggagaatat gccacttttt
    13501 caagacttag accacttcat acttcaggtg tgatttttgg ttttatgctt tcagggattt
    13561 gggcaacttg gtattatata ggtcagcgtg ttcttaaagt gagtatggct gagtcaagat
    13621 ttttaatggc tgttggtaag cttcattttt ggctttatat gcttactatg gttttagctg
    13681 ttatatcttt gtttatgggt gtgactacat ctaaagaata tgcagaactt gagtggcctt
    13741 tagatattct tgttgttctt gtttgggttt tatggggtgt aagtattttt ggacttattg
    13801 gaattcgccg tgaaaaaacc ctttatattt ctctatggta ttatatagct acatttttag
    13861 gtatagctat gctttatctt tttaacaaca tggaagtacc aacttatttt gttactggaa
    13921 tgggtaaatg gtggcatagt gtatcaatgt atgcaggaac aaatgatgct ttagtacaat
    13981 ggtggtatgg acataatgct gtggcatttg tatttactgt gggtattatt gctcaaattt
    14041 attacttctt gccaaaagaa agtggtcagc cgattttctc ttataaactc tctttatttg
    14101 cattttgggg cttaatgttt gtttatcttt gggcaggtgg tcaccatttg atttattcaa
    14161 ctgtacctga ttggatgcaa actatgggtt cggttttctc tgtagtattg attttacctt
    14221 cttggggttc agcgattaat atcttgctta ctatgaaagg tgagtggagt cagcttcgcg
    14281 agagtccgtt gattaaattt atgattttgg catcaacttt ctatatgttc tcaacacttg
    14341 aagggccaat tctttcaatt aaatctgtta atgctttagc acactttaca gattggattc
    14401 caggacatgt tcatgatgga acattaggtt gggtaggatt tatgactatg gctgcgcttt
    14461 atcatatgac tcctagagtt ttcaaaagag agctttatag caaatcttta atggaagctc
    14521 aattttggat ccaaaccaca ggtatagttc tttattttgc ttcaatgtgg attgcgggta
    14581 ttactcaagg tatgatgtgg agagcgacag atgagtatgg taacttgctt tatagcttta
    14641 ttgatactgt ggtggctatt gttccttatt attggattag agcgattggt ggattgttgt
    14701 atcttatcgg tttctttatg tttacttata atatttacaa aacaattgct tgtggaagag
    14761 tgcttgataa agaaccaaaa agcgcttcgc ctatggcagc ataaaaagga gaaaatatgt
    14821 ttagttggtt agaaaaaaat ccattctttt ttgctgtagc tgtttttgta gtgattgctt
    14881 atgcaggcat agttgaagtt ttaccaaatt ttgcagaaaa tgcaagacca attgaaggta
    14941 aaaaacctta tacggtttta caacttgcag ggcgtgcagt atatattaaa gatagttgta
    15001 atgcttgtca ttcacagctt attcgtccat ttaaatcaga aacagatcgt tatggtatgt
    15061 attctgtaag tggtgaattt gcttatgata gaccttttct ttggggctca aaaagaacag
    15121 gacctgatct tgctcgtgta ggaaattata gaacggctga ttggcatgaa aatcatatgt
    15181 gggatcctac ttctgttgtt ccagattcta ttatgccttc atataagcat atgtttaaaa
    15241 ataatgcaga tattgaaact gcttatgctg aggctttaac tgtgaaaaaa gttttcaatg
    15301 ttccttatga tgcagaaaat ggaacaaaac ttggttcttg ggaggatgca caagctgaag
    15361 taaaagctga agctcaggct atagttgatc aaatgaaaaa tcaagaagta aaagatgctt
    15421 ttgctaaagg tgaaatcaaa gaaatagttg ctttgatcgc ttatttaaat agcttaaagt
    15481 aagatgatgg aacatttatc aatagttttt gatgtgatta aaaatttaat cacatttgat
    15541 ttagcaacag ttcaaaaaca tgagtgggag attttccaag gttatggttt ttttgcactc
    15601 gtgatgtttt tgtcaatagt attatatgcg tatttgtatc atttatatag aacagaaaaa
    15661 aaaggcgaga gaaattatga aaattatgca aaccttgcct taaaagatga tattgatgat
    15721 agtgtattag aaagtaaaag gagtgcttaa tgcaatggtt aaatttagaa gataatgtta
    15781 atctcttatc tttaattgga gctattctta tcattttaat cacactagtt attgtgggta
    15841 gaatgtttaa gcaaatgaaa gaaaagaaag gcgagtcaga gcttagtgaa catagttggg
    15901 atggaatagg agagtataaa aatgctgttc ctactggttg ggctgtggta tttttcctga
    15961 ctattgtttg ggctatttgg tattttctat ggggatatcc tttaaattct ttttcaagta
    16021 taggtcaata taatgaagaa gtagcaactc ataatacaaa atttgaagaa aaatttaaaa
    16081 atttatctcc tgaagataaa atagcaatgg gtcaaaatat ctttttagtt cagtgttcgg
    16141 cttgtcatgg aattacagga gatggtatca atggtaaagc tcaaaattta aatatttggg
    16201 gtagtgaaga aggtataatc aatgtaatta aacatggttc aaaaggtatg aattttccag
    16261 gtggagaaat gcttggtgct gctgatttag gtgtagcaga agaagatatc cctgctattg
    16321 ctgcttatgt agcaaaagat ctttcagcta ttaagaaaac tgcaaatgaa aatttagtag
    16381 caaaaggtaa agaagcttat gcaacttgtg cagcatgcca tggagaagat ggaaaaggtc
    16441 aagatggaat gttcccagat cttacaaaat acggttctgc agcttttgta gtagatgttt
    16501 tacatagtgg taaggctggt tttataggaa caatgccgag ttttccaaca cttaatgata
    16561 ttcaaaaaga agctgttggc gagtatgtaa tttctctttc aaggggtgaa tgatggaaaa
    16621 taataataga tgcgtgtttt ctctttcagg tgttacaggt atgttaattg ctacggtttt
    16681 gttgcttgct atcttagcag ttttaactat ttggagtctt aaagctcagc aagaagtgat
    16741 gcaaaagcca tatagtctta aagatgtaca aagtgtaaag atgtttggtt caaaagaaca
    16801 agatcataga agtataaagg aagcacaatg agtaaggctt tggaatattt aattgttatt
    16861 ggtttagttg ttgctgctgc aatcaccgct tggtcggttt tgaccgtaaa tcatcttcat
    16921 ataggatgaa aaaaatatta caagatggct tttttttagc tatcttcttc tttgttttat
    16981 tgccttctag ggtttttgct cttgatgctg tactttttaa tgaaaatatt ttaagtcaaa
    17041 aagtaagtaa cgagattaat cttataggaa aagagcttta ccaaaaaagt aatattttta
    17101 tcggcgttat ggttggtgat aaaactgaaa ttgaaacttt attaaataaa caaaaagaac
    17161 ttcctcaatc ttatatattg cttcttttgt caaaaaattc tcacaaagtt gatatagtgg
    17221 gctcaaaagg tgctttagct ttgattgata aagaagctgt gcttagtcct tatcctggaa
    17281 caggatctat tttgccgata ttagctacaa ataaaggtga tatttataat gctgctatac
    17341 ttaatggtta tgcagatatt gtagatcgtg tggcaaaatc cttgggatta caattagaac
    17401 attctatagg taatgcaaat cgtgatacta tcaatatttt aagaatactt atttatggat
    17461 ttatttgctt tgcattgtta tactatgcac aaagaagaat aaagaggaaa aaaaatgtta
    17521 gaaactaaaa aaagtttttg gccttatggt attttgcttt cacttttggc tataattatt
    17581 gcttgtattg taacgatttt tatagcaagt caccatcctg tgtatgagga tgatttttat
    17641 tttgactctt atcaaaatgt tgaaaataat tacaatcaaa tacaaaaaca acaagtaaat
    17701 tttgataaat tttttaaagt aaattttcaa aatgataaaa tcacttttat aggtaaaaga
    17761 aaaattccta gttatgaagt ggatcaaaat tcctatgttg caaattttaa aatttctgca
    17821 ttacaaaata taaattctaa tgatttaaaa gttcaagttc ttcttacaag accattcact
    17881 aaaaattttg atcaaaagtt agaaggacaa gttaaaaatg gaattttaag tatcgcttta
    17941 cctaaattag ataaaggtag atgggagctt aagctaaagt tttatgcaaa tcaagaaaca
    18001 gtgggttttt ttagctacga attaaatgct caatgaaatt aagaattttt agctcttcaa
    18061 ggcaaattag agaatattat aatcaaaaaa aacagcaaaa tgctttatta gatagtgcta
    18121 ttcatatagg tgaattttta gataaagttt gtttgagcaa ttttcataaa gcaagttctt
    18181 atgaaagttt gcttttaatg caagaagctt gtctaaaaag taaggattta gaaaaaaaac
    18241 taggaatttc ggtagaattt tttgcttttt tgaaaaataa cgaatatctt ttttcttttt
    18301 ttaaagaact gagtttggaa aaaaaaagca tagaagatct taaaaacaat gattattatg
    18361 ccacctataa tgaacatttg gaaattttag atgaggtata taagaattat cttgctttgc
    18421 ttgaaaagaa ttctttttat gatgatcttt ctttacctaa aaattacact cttaataaag
    18481 attttttaga tgagtatgaa gctatagttt atgat
//
LOCUS       DARATF010000028        18503 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.028, whole genome shotgun sequence.
ACCESSION   DARATF010000028 DARATF010000000
VERSION     DARATF010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18503
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.028"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..722
                     /locus_tag="SB502_000746"
     CDS             <1..722
                     /locus_tag="SB502_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEG0434209.1"
                     /translation="NFYEDFKSHKLIFNHEHQSIFKKNTSQQITLLHPTRIRRPKFVN
                     STHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKLLNSA
                     LKELSYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDANPFVVQKLQSSN
                     HSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNRYDFIELCKTFKQFSLAGKKLNI
                     QARIKAGFTQEECEVIEKFYS"
     gene            complement(713..1441)
                     /gene="pssA"
                     /locus_tag="SB502_000747"
     CDS             complement(713..1441)
                     /gene="pssA"
                     /locus_tag="SB502_000747"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEG0434210.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKIRNQE"
     gene            complement(1451..2068)
                     /locus_tag="SB502_000748"
     CDS             complement(1451..2068)
                     /locus_tag="SB502_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEG0434211.1"
                     /translation="MKDFIAKDGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEITIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            complement(2065..4002)
                     /gene="ftsH"
                     /locus_tag="SB502_000749"
     CDS             complement(2065..4002)
                     /gene="ftsH"
                     /locus_tag="SB502_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEG0434212.1"
                     /translation="MNNNTPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NGLPTRLQELEEVKTEVKVEE"
     gene            complement(4006..4851)
                     /locus_tag="SB502_000750"
     CDS             complement(4006..4851)
                     /locus_tag="SB502_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEG0434213.1"
                     /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEEFSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNCINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     ADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            complement(4874..5266)
                     /locus_tag="SB502_000751"
     CDS             complement(4874..5266)
                     /locus_tag="SB502_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HEG0434214.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            complement(5379..6272)
                     /locus_tag="SB502_000752"
     CDS             complement(5379..6272)
                     /locus_tag="SB502_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HEG0434215.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLRRCVL
                     SDPYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            complement(6272..8044)
                     /gene="pglF"
                     /locus_tag="SB502_000753"
     CDS             complement(6272..8044)
                     /gene="pglF"
                     /locus_tag="SB502_000753"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HEG0434216.1"
                     /translation="MIFYKSKRLAFFLISDIVLILLSVYLAFSLRFSGDIPSIFYYGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSKMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFVVEEKERIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGV"
     gene            complement(8046..9206)
                     /gene="pglE"
                     /locus_tag="SB502_000754"
     CDS             complement(8046..9206)
                     /gene="pglE"
                     /locus_tag="SB502_000754"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HEG0434217.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGECFSFLDELENS
                     RSNRWLSTALIDFDKNELNSCQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHAQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKNDVYEISKLILKSIKA"
     gene            complement(9302..9910)
                     /locus_tag="SB502_000755"
     CDS             complement(9302..9910)
                     /locus_tag="SB502_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434218.1"
                     /translation="MHFNNNLVVHYIVNPSPLGWIVINLLTICLICYIFPLKNSLKHK
                     KLFSLKANVNSKNSRIIKYTGIAAFLGGLIGIWYNFEGFYQLLFFFELENENLKTLWS
                     LQVSVSSVITGMLLLLIYVINLAIVCENGIYIVSKFNLFYMYFIKREDLEIVKIEKMK
                     FLNQVEVCFVIKTKNKILLKCFESIYKKEDLEKLKNWYENKL"
     gene            complement(9912..10499)
                     /gene="pglD"
                     /locus_tag="SB502_000756"
     CDS             complement(9912..10499)
                     /gene="pglD"
                     /locus_tag="SB502_000756"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HEG0434219.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECVFLDDLKGMKFES
                     TLPKYDIFIAIGNNEIRKKIYQKILENGFKIVNLIHKSALISPSASIEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKNQDEKGVFIGIPAKRM"
     gene            complement(10486..11088)
                     /gene="pglC"
                     /locus_tag="SB502_000757"
     CDS             complement(10486..11088)
                     /gene="pglC"
                     /locus_tag="SB502_000757"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HEG0434220.1"
                     /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNKEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTGKFNGKN"
     gene            complement(11081..12211)
                     /gene="pglA"
                     /locus_tag="SB502_000758"
     CDS             complement(11081..12211)
                     /gene="pglA"
                     /locus_tag="SB502_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HEG0434221.1"
                     /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDFIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINSLYKLSFKFAHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV"
     gene            complement(12221..14362)
                     /gene="pglB"
                     /locus_tag="SB502_000759"
     CDS             complement(12221..14362)
                     /gene="pglB"
                     /locus_tag="SB502_000759"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HEG0434222.1"
                     /translation="MLKKEYLKNPYLVLFAMIVLAYVFSVFCRFYWVWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTLTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPIILLANEYKRPLMGFVAALLASVANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILSSLTLSNIAWFYQSVIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDFSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAILVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFSLSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKSDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            complement(14366..15463)
                     /gene="pglJ"
                     /locus_tag="SB502_000760"
     CDS             complement(14366..15463)
                     /gene="pglJ"
                     /locus_tag="SB502_000760"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HEG0434223.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYMKNNFNSLVNKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSISPKKCEILYNAIDLENIGQKALEDIALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            complement(15451..16380)
                     /gene="pglI"
                     /locus_tag="SB502_000761"
     CDS             complement(15451..16380)
                     /gene="pglI"
                     /locus_tag="SB502_000761"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HEG0434224.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAYR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            complement(16373..17452)
                     /gene="pglH"
                     /locus_tag="SB502_000762"
     CDS             complement(16373..17452)
                     /gene="pglH"
                     /locus_tag="SB502_000762"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HEG0434225.1"
                     /translation="MMKISFIIATLNSGGAERALVTLANALCKEHEVSIIKFHAGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKADVFISFLDTTNIACI
                     AAKIGLKTPLIISEHSNEAYLKPKIWRFLRRVSYPFCDALSVLGSSDKVYYERFVERV
                     KLLLNPCHFSDEISFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGQLRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVDCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISHIKEEWLKLIAEVKNA"
     gene            complement(17449..>18503)
                     /gene="pglK"
                     /locus_tag="SB502_000763"
     CDS             complement(17449..>18503)
                     /gene="pglK"
                     /locus_tag="SB502_000763"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HEG0434226.1"
                     /translation="LNTNLNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAV
                     PRIYLEGIGFCVLVFIVVFLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHD
                     LLYYHSSLDIIYQNLRQEEENLGEEKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKK
                     GEKIAFIGESGCGKSTLVDLIIGLLKPKEGQILIDEQELNANNTKNYRQKIGYIPQNI
                     YLFNDSIAKNITFGDAVDEEKLNRVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQK
                     QRIAIARALYLEPEMLVLDEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQ
                     CDKVYRLEHGKLKEEK"
BASE COUNT         6571 a         3510 c         2082 g         6340 t
ORIGIN      
        1 aaaattttta tgaagacttt aaaagccaca aattgatttt taatcacgag catcaaagca
       61 ttttcaaaaa aaatacatca caacaaatta ccttgcttca tcctacgcgt ataagaaggc
      121 ctaaatttgt caattcaact catgcgcttg ctaaaataat tcattcagtc gctcatatag
      181 aatttaatgc aattaacctg gctttagatg cgagttatcg ctttaaaaat ctacctttgc
      241 aattttatta cgattggctg gaggtagcag atgaggaaat taaacatttc aaacttttaa
      301 attcagcact taaagaactt agttacaaat atggaaattt tccagtgcat gataatttag
      361 aatctgctct agaagctaca aaagactctt taagctttag aatgggagta gttcatagag
      421 gtttagaagc taaagggctt gatgccaacc cctttgttgt tcaaaaactt caaagttcca
      481 atcattccat taaaaatctt ctaatggaat atcttgaaat tatacttaat gatgaaataa
      541 aacacgttaa aaaaggagat acttggtgga aatttgcaaa tcaaaacagg tatgatttta
      601 ttgagctttg caaaacattt aaacaattct ctcttgcggg aaaaaaactt aacattcaag
      661 caagaatcaa agctggcttc actcaagaag aatgcgaagt cattgaaaaa ttttactctt
      721 gatttcttat cttaaatttt gaaacgataa tggtatataa aacccgaata attccataaa
      781 gcacatacaa gcttgctaaa attactaaac tttcaagagg gtaaagatat aaaaatgaaa
      841 atattataat taaaataatc aaaactttta aaacactaga acgattaaaa tcaagctttt
      901 taaaactagg ataacgtata ttacttacca ttaaaagccc taaaattgct tgaagcacca
      961 aaaaaactac gccataaggc tttaaaaaat cataactgat aaacgcataa gtccatatag
     1021 cactcacaac tgctgcagta ggtataggaa gacctataaa aacggagggt tcataagtgc
     1081 ctgtggtaac attaaatctc gccaaacgaa tagctccaaa aaccacaaaa aaagctgtaa
     1141 tcaaagatcc aagttttcca aaatcataac ctatcgccat ataaaaaaga accgctggag
     1201 caactccaaa agctactaga tcagccaaag aatcaaattc tactccaaat tttgaagtag
     1261 aatttgtaag tcttgcaaca cggccatcaa gcccatcgca aatcaaagat aaaataatat
     1321 aaatcaaagc tgtataataa tttccatgta ttgaagctat aatagaaata acccctaaaa
     1381 aagctgaagc agctgtaaaa agattgggta aaatataaat tagttgcggt ctgttattca
     1441 ttatttttcc ttacgcaaaa tagcctagca atgaacctgc tttaatttca tcatttaagc
     1501 ctatatgaat tctagtatct tttggtaaaa gtaaacttat agagccatta attaaaaaac
     1561 ccattctatc tcctgctttt aaatcatgag aaatattatc aagctttaat tttctatcaa
     1621 aagaacctgc atagattcgc aaggctatcg ttttattctc tttaactttt gccaaaataa
     1681 aagctctttc attcatcatt tttgcagatt ttaattcact gcacaaaaaa agcccatgtc
     1741 gtaaacgaat atctattata gacattgcaa aaggtgtatt aaaattccca gcatcataaa
     1801 gagcattttt aatagtaatt tcaacacatt cacccaaatc tttatgatga atattttcta
     1861 ttttagtaac cctaccatcc ataggtgcaa aaatagcttt ttcatcacta caaacaagtt
     1921 ctcttttggg cgctctaaaa agaaaaatac aaattacaat taatgctaat agcaagatgg
     1981 aaaaagaata aaaaatccac acaaaaataa aaattaagct taaaataata agacttaaat
     2041 atccatcttt tgcaataaaa tctttcattc ttctacttta acttcagttt taacttcttc
     2101 gagttcttgt aaacgagttg gtaaaccatt ttgatcctca aactctttaa taatctcacg
     2161 cactttatta ccttcaatag tttcttcttc ataaagggct gcaaccatag tctcaatcgc
     2221 tcccttataa gtatttaaag tatctttaac atctttatag cgttcatcta aggttttctt
     2281 tacataatca tctaaagatt ctgccatctt ttcagaatag tcttttatag tttgcccacc
     2341 acttaagaaa gtatttcttt gtttttcaag caccataagt cctgcaattt cactcatacc
     2401 atacatagaa atcatagctt ttatgatatc ggttgctctt tctaaatcat tacttgcacc
     2461 cgttgaaatt tcacctataa atacttcttc agccgcacga ccacccaaaa gtacatctac
     2521 ttcagcgata agttcatgtt tttgcattaa aaatttattt tcttcagggg tgtttaatgt
     2581 gtatcctaaa gccgcaagac cacgtggaat cacagaaact ttacttacac gctttgcacc
     2641 tttggtagtt tcagcaatca aggcatgacc acattcatga taagtaacaa ttttcttttc
     2701 tttttcatta atacgacgtg atttcttctc aagtcctgct atagctcttt caacagcttc
     2761 aactaaatca ttttgttcta catatttttt agaatcccta cccgctaaaa gtgctgcttc
     2821 attaataata tttgcaagat cagctcctgc aagtcctgcg gttaaacgtg ctatatcttc
     2881 tactttaact tttggggata ttttgacatc tttcatgtgt acttttaaaa tatcacacct
     2941 acctttaaaa tcaggtttat caactaaaac ttgtctatca aaccttcctg gtcttaaaag
     3001 cgctgcatct aaaacttctg ggcgatttgt tgctgctaaa acaatgactg gggaactttc
     3061 tgtcccaaag ccatccattt cagccaaaag ctgatttaaa gtttgctctc tttcatcgtt
     3121 tccacccatc atgccacttg ctgcacgact tttaccaata gcatctattt catctataaa
     3181 aacaatagca ggagcttctt tttttgcatt ttcaaacaaa tctctcacac gagaagcacc
     3241 tacacccaca aacatttcta taaaagatga acctgaaaca ctaaaaaacg gcacatcagc
     3301 ttcacctgca actgcttttg caagcaaagt ttttcctgta cctggaggcc caacaagtaa
     3361 aagccctttt ggaattttag ctcccaattt aatatatctt tcaggatact ttaaaaaatc
     3421 tacaatttct tttacttctt ctttagcttc ttcaacacca gctacatcgc taaattttac
     3481 tttaggtttt tctgaattta caagcttctt agaacttcct atacccaata tagaacttcc
     3541 catatttttt tgcatacgac ttgccaaaaa catccaaata ccaaagaaaa taaatactgg
     3601 caaaacccat gaaaaaagta tatccgtaaa ccaatttgtt tcagaatacg caccataagc
     3661 gatattttta ctatctagta aactcacaag ctcaggatca ttaacttttt ttgctgtata
     3721 aacagtattg tgagagcttg aaatcgcttt gattgttgtt tgtcctatac taacttgatt
     3781 gatttgtcca ctttcaataa gcttttttaa ctcagaataa gggacatttt tatttacttc
     3841 attgccattc aatgccccgc caaaagaacc attgccatca aaaaatccct taaaaataat
     3901 tatcattaca attgcaaaaa tcgcaaaaat aaaaatggga tttttgttaa aaaaattatt
     3961 accctgcgga ttacccttat tatttggggt attattattc attacttatc cttttttatt
     4021 atttttatat acaaaactac accactcatt gatttgcatt tcatcaatga gttccaaatc
     4081 ttgaaatttt tctttaattc ttgttgaata tttatctaaa attcctgaca aaataagtat
     4141 agcattatct tctaaatggt ttttaatatc tttttctaaa attaaaatca catctgcaat
     4201 gatatttgca acaattagat tatataaacc atttgcttta tctatagatc cacaccaagc
     4261 cttgtgaaaa tcgacaccat ttaatcttgc attttctaaa gaactatcaa tagccaactc
     4321 atcagtatca caaatttcaa cattacagcc aaactttgcc ataataatac ccaaaattcc
     4381 actaccacaa ccaagatcta aagctcttaa tttactttta gaaaattttt gtaaaaattt
     4441 tacacaagaa tatgtgcttt cgtgatgtcc tgagccaaag gctaaggctg gattaatctt
     4501 tatatttata caattcttct tttcttcttg ccaagttgta tggatgtaaa cattatccac
     4561 taagataggt tttatgcctt ttttatattc ttgtatccag tccttgtttt ctttctctac
     4621 aagacttaaa ttagaaataa ttttatgatt taaattgaaa gtagttgtaa gtttttgagc
     4681 aaatatttca agtgcccatg aaaactcttc taaactctca tgggatctaa tgtaaacacc
     4741 attatctttc tcttctatgg cttctatacc taaatcaaaa gcaaaatcaa gaaataaatt
     4801 tttatactgc tcttctacga taaagaacaa ttcataatat tttttttgca tttagaattt
     4861 taaaaatcag cctttactca gctgcacctt ctccacttcc tgttcctaaa acatcttcaa
     4921 gtttttcctt taaaacttgt ggagtaaaag gttttacaat atagttattt acgccagctt
     4981 ttaaagcagt aatcacttca gcttttccgc cctcagttgt aaccatgatg ataggcatat
     5041 cttcatattt tttctctgct cttacttttt ttaccaactc caagccattc atttctggca
     5101 tattccaatc tgtaattaaa acttttacat cttcattttt agttaataaa tcccaagctt
     5161 caacgccatg ctcagcttct aaaacatcat cgtgtccaag tcttgttagg gtatttttaa
     5221 taatccttct catagtagaa ctgtcatcaa caactaacaa tttcacaatt tcgtcctttc
     5281 aaagttttta tagttttatt ttaccctttt tagccttatt aatcaagcta aaaaatttta
     5341 aaaaacagca ttatatcatc ttttacttaa atttttactc aaatattatt atttttatac
     5401 ttaaccgtaa ataaatatac acttaaacct aaaagaagca agctcactcc accgataaga
     5461 taaatcgcat aaatcatctg agaaagatca ccaatagcaa gtttaaatac caacatcaaa
     5521 gcttctatag ctaaagcaat gataatagaa cccaaaaatc tcaccatagt tttttgaatt
     5581 ccaccttctt cttttttcgt ccttcctaat acttcttgtt cgatcaaagt ttttgccaaa
     5641 tcaaaaatag ctaaagccaa agttatagcg atggtacttt caaacatatg ttctatacct
     5701 atagcttgat tatcaaaaag actaaaaaaa cctttttgaa ataaaaaaca agtaatcaca
     5761 aataaaacca gtgcgaagca aaaatatacc aaacgactaa actgagtaaa aacaaattca
     5821 aattttcctg cttgaataat ctttaaaata tcttcaagct tgatatcaat acaaacaaca
     5881 aaaagcaagt tatttttatc atcgtaaatt ggcatagaag ctgtcacgca aagctcatta
     5941 tttaaaaccg aaggataagg atcgctcaaa acacatcgtc ttaattttac agctctataa
     6001 aaataagaac gagtacttct atcctcaccc tgccctattt catgagcttt atttaaggaa
     6061 atcgcatttt ctatttgcat acctgaaata tctaaaatat acaaagcatc aaaaacaaca
     6121 acttcatgag ctattttatc caaagctgtt ttaatcgttt caaggtgaat atcaggaagt
     6181 ttattaggca gatttcttgt taaaatataa ctcatataag ctctagcacg atagcgatta
     6241 tcttcaaatc tttgtatatc ttttatatac attatacacc ttctttattg tgtttaaatt
     6301 caggtacaat ctttaataaa gcctctgaaa tatcttcaca tatttgtaaa ttttctatct
     6361 ctttattaag ccaatcaaga tcaaccttct cattctttgc tacaaaaata ctctcatatt
     6421 gcgttttagc atcattttca tcaatcaaaa gctcttcata aagcttctca ccttttctta
     6481 agcctgtgat tttaatttct aaatcattgc gattagaaag taaaagcatt tttttagcta
     6541 aatctatgat tttcacaggc ttacccatat ccaaaacaaa aagttctccc ccttttgcga
     6601 tagctccagc ttgtaaaaca agttgcactg cctcagccac aagcataaaa taacgcacta
     6661 tatcagggtg cgtcaaagtt aaaggctcat tattggcaat ttgtgcttta aatttcggta
     6721 tcacactacc actagaacct aaaacattac caaaacgcac acaagcaact tcaaaatttt
     6781 catcactcat acttaaagta taaagctcac aaactctttt agtgcaaccc ataatatttg
     6841 ttggtcgcac tgctttatct gtacttatca tcacaaattt agctacttta ttttctttag
     6901 cactgtcgca taaaatttta gttcctaaaa tattattgat tactgctgaa tgtggatttt
     6961 gttcgcaaag aggcacatgt ttataagcgg ctgcatgtaa aataagctca ggtttataag
     7021 tttttaatac ctcatctaaa ctttgcttat ctaaaatact cagtaaaata ggagtaattt
     7081 tttctttata taaatttaaa tcatcattga tcttataaag attatactca ctatgatcaa
     7141 ccataataag atgcttagca ccaaatttaa tacattgctt acaaagttca ctgcctatag
     7201 ttccacctgc tccacttacc aaaactacct tgtcttttaa aaaagccgcc acagcactat
     7261 catctaaatc ttttggtttt ctagcaagca agtcttctat actgatatct cttgcttcgt
     7321 ttcttgtaaa agaaaatatt tttacatcac aaataccata agctacaagt tcttcaaaaa
     7381 gttttttaag ctcttcttgt tcaagtctta aagcaataat ggcagttttt accccttgtt
     7441 ctacataaga ttttattctt tctttttctt ctacaacaaa tttatcacaa taagtcccta
     7501 taagctcttt tctcgcatca actacaccca caggaaaaag ccctaaagaa ccttcttttg
     7561 caccttttaa caaatgcaaa gccttagaag ttgcccctac tacaatacaa ggagtttctt
     7621 cttctttcat tttagaaggt ttaaaatcca caagcattct tttgctaatt cttaaagtac
     7681 ctataaacat ataagaaaga acaaaatcta tcacaatagc acttcttgga aaaggattaa
     7741 aaaaatcact aaaaaaataa aaaataagaa aaaaacaaaa ctcagctaaa agcaaagcaa
     7801 taaaaatttt tcttgcttca ttgagagaaa aaaatctcca agctactttg taaattctaa
     7861 aaacaaataa aaatgaaagt tttaaaacaa gcaaaataat agcagaaacc atcataccat
     7921 aataaaaaat gctcggaata tctccactaa atctcaaaga aaaagccaga taaacgctaa
     7981 gtaaaattaa aacaatatct gaaattaaaa aaaatgctaa tcttttgctt ttataaaaaa
     8041 tcattttaag cctttatgct ctttaagatc agttttgaaa tttcataaac atcattttta
     8101 ctcatcgccg taccacttgg caaacaaatt cctttttgga aaaataactc actattgcca
     8161 ttaagataag ccttagctcc tttaaatact tcttgagcgt gcatagcttt ccataatggt
     8221 cttgtttcta tttgttcatt tttcaaatct tctatgagtt ttgaaatttt tggatgcaaa
     8281 gtaatatttt tttgactgat atttatatct ttttgacaag aattaagttc atttttatca
     8341 aaatcaatca aagctgtact taaccagcga ttgcttcttg aattttctaa ttcatctaaa
     8401 aagctaaaac actctcctaa aaattcttta taccactcat aaatttctct ttttttaagc
     8461 actctttgtt ctaaaacctc catttgcgct acgccaatag ctcctaaaac attgcttaag
     8521 cggtaattat aaccataatc taaatgttca taatgcaaac aattttccct agcttgagtg
     8581 ctataaaatc ttgctttttc aatcttttct ttattttttc ctataagcat acctccacct
     8641 gaagtggtga taattttatt gccattataa gaataagctc caaattctcc aaaagttcct
     8701 aaagctttat tcttataaaa acttcctaaa gcttcagcag catcttcgat taaaacaatt
     8761 tcattttctt tgcaaatttc aacaatttca tccattttag ccgcattgcc ataaagatga
     8821 gttaaaatca atgcttttgg ttttttttca cattctttaa tagcaagctt taataaatct
     8881 acatcgatat tataagtttc atcacaatct ataaatacag gttttgcttt aagataacaa
     8941 ataggtgcta ctgaagcgat aaaagtaaaa gaagaagcca aaacaatatc atcttgtttt
     9001 acccctgcca cccttaaagc taaatgcaaa gccgctgtgg ctgaatttaa agctaaggca
     9061 ttttcacttt tactgtaagc cttgacactt tgttcaaagc gatttacaaa ttcacccaaa
     9121 ggtgctatat aattgctttt gaaaacttct tctatgtatt ttaattcatt accacccata
     9181 tgcggaggag aaagaaaaaa tctcatgatt tatcctttgt gtaaaacaaa atttttataa
     9241 attgactcta ttttacctaa aaaaatttac aaagattcaa atatttaaat tctttttata
     9301 gtcaaagctt gttttcatac caatttttaa gcttttctaa gtcttctttt ttataaatac
     9361 tttcaaagca tttaaggagt attttatttt ttgttttgat aacaaaacaa acttcaactt
     9421 gatttaaaaa tttcattttt tctattttaa caatttctaa atcttctcgt tttataaaat
     9481 acatataaaa aagattaaat ttactaacta tataaattcc attttcacaa actattgcta
     9541 aatttataac atatatcaac aataataaca tacctgttat cacagaagaa actgatactt
     9601 gcaaactcca aagtgttttt aaattttcat tttctaattc aaagaaaaaa agaagttgat
     9661 aaaaaccttc aaaattatac caaattccta ttaatccacc caaaaaagca gcaatacctg
     9721 tatattttat aatcctacta tttttagaat ttacatttgc tttaagacta aaaagttttt
     9781 tgtgttttaa agaatttttc aaaggaaata tgtagcatat tagacatatg gttagtaaat
     9841 taatgacaat ccaccccaaa ggcgaaggat ttactatata gtgaacaaca agattgttat
     9901 taaaatgcaa tttacatcct ttttgcaggt attcctataa aaacaccttt ttcatcttga
     9961 tttttaacta aagttgctcc accacctaaa atactatcat ctgctaagct taaattaggc
    10021 aaaacacaag aattaatccc taaaaaacaa tttttaccaa tttttacatt acctgcgcat
    10081 ttagccccta cactcacatg agaaaattcc cctatcacac attcatgttc aatcacactt
    10141 gaagtattca aaatcacgcc tttttctatt ttggctttag cattaattac cacgtaaggc
    10201 atgattaaaa ttcctgcatt ttcttctata cttgcactag gacttataag tgcgctttta
    10261 tggataagat taacgatttt aaagccattt tctaaaattt tttgataaat cttttttcga
    10321 atttcattgt ttcctatggc tataaaaata tcatattttg gcaaggtgct ttcaaatttc
    10381 attcctttaa gatcatctaa aaaaacacat tctttataac ccatattttt agccacatct
    10441 tcacaaacaa gcccatgacc actagcacca taaatataaa ttttttcagt tcttgccatt
    10501 aaatttcccc gttgtaacat gtccttcttt gcttacccca cttcgtttta aaacctttaa
    10561 ggctgttaaa aacatgattt ttaaatcaag taaaaaagaa atatttttca cataatacac
    10621 atcaagttca aattttttct gccaagaaat agcatttcta ccatttacct gcgcccatcc
    10681 tgttatacct ggacgcactt tatgacgcaa tttttgctct ttattgtaaa gaggcaaata
    10741 ctcaaccaaa agaggcctag gtcccacaaa actcatatcc ccttttaaaa cattaaaaag
    10801 ttgcaaaagc tcatccaaac ttaagcttct aacgattttt ccaaaagctt tcaaacgcaa
    10861 ttcatcactt aataactcac ccttttcatc tctttcatcg ctcatggttt taaatttata
    10921 aattttaaaa attttttcat ctaacccggg acgattttgg gtaaaaatca cacttccttg
    10981 agtgattttt aaaagtaaag cagtgattaa aatcaccgga gaaaaaagca ctaaaagtac
    11041 taaagctaaa ataaaatcaa aaattctttt aaaaactttt tcatacattc ttaattaccc
    11101 tatcataaag ttttaaataa cgctgtgcga tattattttc atcgtattgt aaagcatctt
    11161 gggcggcatt tttagctaaa tttaatctta atttttcatc ttctaataaa agtgaaattt
    11221 tttcgcttaa atccttagca ttttttgttt ttgcccaaag tccatcataa gcattagaaa
    11281 tagcctctac acaaccttca caatcgctca ccactatagc cttaccacaa gcttttgcct
    11341 ccaaaacact tacaggaaag ccttctttat agcttggcaa aacaaaaata tcacaatttt
    11401 gcaaaagttc tacgatatca cttctagcac ccaaataatg cactgcgcca gagtttaaaa
    11461 actccaaact cgcacaagaa ggattttcat ctcttccacc aactaaaaca aaatttgctt
    11521 tgtcttttag catagtagca ctttcataaa attcttttac acctttatgc cataaagctc
    11581 ttgctatcat aagtacaatg ggttttttat ctatgtttaa atttttccaa aaaagctctt
    11641 ttttttccga ttctacataa ataggaaaaa atttttttaa attgatccct acagatttta
    11701 tcacgcaaat tttattttct ttaagtccta aattccgcat aaactcagca ttactttcat
    11761 tgacaaaaat aaattggtgt gcaaatttaa aacttaattt ataaagacta ttaataacaa
    11821 aacgcactaa atttgcctta aaaccttgat ctatataaaa agatcccaag ccttctacta
    11881 aggcaaaacg ataaggaatt tttgcccatt ttgctgctaa aattccaaaa gtattgcttt
    11941 tgtgtgccgc actttgaata aaatcaagat ttaaattttt caaaacctta gcaagataaa
    12001 aaaaattctt taaaaccaca aaaggattta aactagctct tgaaaactca taaacaatta
    12061 cttttaagcc aagatctcta agtttttgcg tgtattcatc ttgcggcact ataacaaaaa
    12121 cttcgtcttt tctatctttt aacgctttta taataggcat tctaaaatga taaatactcg
    12181 ctcctgcatg tgataaaaat cctattctca ttttcaaccc ttaaatttta agtttaaaaa
    12241 ctttagcatc tctagaatta atcaccaagt caaataaatt cttatcataa tttcccaaaa
    12301 aaaacatttg cacataagca ctattaaaca tggttttatc cattaaaata aattgtgcgt
    12361 aaggaatagc actatccttt aaataaaaaa tataaaactg agccttatca tcaattggag
    12421 tgattttgta ttcaccttgt ttaatagaat taatctctac gatactattt acagaaacca
    12481 cattatcgcc tattttaaaa cttctaaaat catcgcttaa aaccactccg ttgctaagat
    12541 aaatttctcc atttttaaca tcaagtggat aagctgtgct aaaggtaaaa ggtttatcca
    12601 aaactcctgt atctaaatta ataaaagaaa aactagccac cgtagaaaaa atcaaagaca
    12661 ttctagcggg catataaaga taaatatcac gagtttttgg tgtatcgatt ttaaaatcag
    12721 gttttgataa tgaagctaga aataaatcca cattgctttg attataatct ttcatcatgg
    12781 cttgtaaaat gtctgatttt aaaatatcat tttgcggagc ataaaagctt ttttctgtat
    12841 attctacact aagtcttgcc atattagctg cagcttgttc atctttactt aaagaaaaag
    12901 aagggaaaaa attatcctta cctaaatgct ttccaccatc tactaaagtt ttcacatcgc
    12961 tataataacg cacaggataa ccataatccc accaagttac cacataatct tctctattgg
    13021 ctatattttt taattgattt aataatgatg cttcattttg agaaaaaact gttggcgctt
    13081 tatagttgta aatatggata aatactggag ccaaagtcaa aatagttgca aaaacaatac
    13141 aaacatttga agttaattgg ctatattttt taaccaatat agccttaaac tcgctcaata
    13201 aaaaaccaaa tcctaaagcc attacaggta cagaataaat ggtaaatcta agtcctcctt
    13261 ttaaggctaa aaacccaagc accaatatag gtaaagccat aatcatactt ttatgttttc
    13321 tcaaaagcca tacaaaacca aacaaagaaa acaagaaaac aatttcacta ccactaattc
    13381 ttcgcataaa ttcgctaaaa tctacatttt caacttcttg tatggtttga ttaacattaa
    13441 aatacataaa gccctgtgtt aaattcgcac tttcatcact tctaaaaata taaaatttaa
    13501 gctgataaag tatgggatca accccaccgc ttaaaatcaa aaatatcaaa gttgcactac
    13561 ctaaaattcc tataatcata aaatttaagc gtttttgctc taaagcaaat aaagcaaaaa
    13621 gtattactat aatgacactt tgataaaacc atgctatatt tgaaagagta agagaagaca
    13681 aaatcacagc tatataaaaa atcttttctt ttctatgaaa aataagtgta taaattaaaa
    13741 aaagtccaat taaagctaca tttaaagtat aacttgaagg ataccaccaa agataaattc
    13801 ctataaataa tggcaaggca atcaatgaaa aaaagtcttt ttttaaaatc attcttacca
    13861 taaaaaataa aataaacata ggtaaaacaa ttaccagcat atccgtatca taatacccac
    13921 tcatagtgcg attataataa ctgtttgcta cacttgctaa aagagcagct acaaagccca
    13981 ttaaagggcg tttgtattca ttagctagta aaataatagg aatcaccacc aaagaagata
    14041 aaaaagtact catatataaa atgatacttt caaaagaaaa aggtgtgatt ttataaagcc
    14101 aataagtaag agtagataaa gaagatccat aataactcaa atcattaggc tgatgaaaac
    14161 ctgctatcat atctcttgcg ccctcagcaa aagcatagcc atcgtttgaa atgatcatta
    14221 attgattatt gaaaaaatac tcgttaaact cacttgccca ccaaacccaa taaaacctgc
    14281 aaaatacact aaaaacataa gctaatacaa tcatcgcaaa caaaactaaa taagggtttt
    14341 ttaaatactc ttttttcaac atcttttatc ctaataaata tttcaaagca tcgcgtgcaa
    14401 tttttacttt atcaaaggct ttagccctag ttttagcttt gtttttatac gcttttctta
    14461 atttatcgtc ttcaagcata gtttttaaac cctgaaacat agagttttca ttatctactt
    14521 ctactaaaag tccaaattca tcatcgccaa aaagctctct tgcaccactt ttatgatcag
    14581 tgcaaaccac cgcacaagaa caagccaaac tttcgattaa aacatttgaa aaaccttcaa
    14641 acacagaagc aaaagcaaaa aattcgcatt tagccatgta tttataagga ttattatcaa
    14701 atcctaaaag caaaaccttt tcttccaaat ttaattcttt aatcaaagct aaaagctcat
    14761 ccttaagcac accttcacct aaaatcacaa gctttaaatc tgttttcaat ctcgcataag
    14821 cacgaattaa taaagcatga tttttacctt tatcaagcct gcctacactt aaaataaatt
    14881 tatcttttaa agctatgtct tcaagggctt tttgccctat gttttctaaa tcgatggcat
    14941 tgtataaaat ttcacatttt tttggactta tactaaaatt ttgcactaaa tcttctaaat
    15001 ttcccttaga attaggcaag attaaatcag cttttgggta aagcaaagaa attaaaaatt
    15061 tatttaccaa agaattaaaa ttatttttca tatacatcac acttggcgta gtgcattcat
    15121 tgatcacaag gcgagttttg tttccaaaca ttcttgccat taaagctata taattaggtc
    15181 gatttaaaaa aacaaattct gtatcaatac ctaaatttct gcaaagtttt ttgtatttta
    15241 aagccaaaaa aggtagtttt aaaaatttca aaataggatt ttcactaggt tttgaacatt
    15301 ctaaaaaatg aatttgacac tctggaattt cataagaaat tttatcattc atcaagatca
    15361 aatgcacttc aaatttcaaa cttaaaatag gcaataaagt cgccacaact ctttcagcac
    15421 caccacttcc taaagaataa ataaaaatgc ctaatttttg cataaagcca cccgaatttt
    15481 tgataatttt tcaatcatat tatttggaat tatacttaaa atgagtaata tcaaagcagg
    15541 agcgttgatt tttatactta ggcttttaaa caaacattta taaagggctt tataattttt
    15601 tgcaagtttt gcataataag ctgccatttt ataataactc gcacaagttt ttttataatc
    15661 tttatcctta ctcattctaa gttcattttc taaaatttta gcaagctcta aatatcccaa
    15721 atacacccta taagcatttt tactcgcccc taaagtcacg ctatcttgcc taaaaattct
    15781 ataaatccta aaagccttat ggatataaaa acttttttct ttgtataaat ttacccaaag
    15841 cgtggcttca ttgccataaa attcttcatt aaaacgctta ttttcaagta gggatttttt
    15901 aaaaacagaa aaaaactctc cgctaaattt agccattaaa aaatcttttt tagaaatttc
    15961 actatctttt tccaagccct tgccgctaaa ttccttgctt aaatttcctt ctttttctat
    16021 caaacaattt ccaaaaacat gagcataacc ctcatttgct ttttgcatca aggtacttaa
    16081 agccccggat aaaagctcat catcatcatc taaaaaagtt acaaactcgc cacttgcttg
    16141 atctaagcca ttgtttttat tgccatttgg accttgtttg taattttgat ttaaaaaata
    16201 cttaatgcga tcatcatctt tttgtaaatt ttgcaccaca cttttagtat catcgctaga
    16261 attatcatcg cttacaataa tttctaaatc tttaaaatct tgattttgta tgcttttaat
    16321 agccttttct aacaaaactt gacgattaaa agttggtact ataacagaaa gtttaggcat
    16381 ttttaacctc ggctataagc ttaagccatt cttctttgat atgagaaatt tcaaagtctt
    16441 tacacctttg tttggcatta tttacaagtt cttttctaaa attttcatca tttaaaacaa
    16501 gttcaagttt tttagcaagt gctatttcat catcacaatc taccaaaagc ccatcatgat
    16561 tatctttgat taaatcctta gcaccattat aataagaact tgaaattcta caaacctcaa
    16621 aatacaaact ttcaattaaa accgttggca aaccctctac aaaagaacaa aggcaaagca
    16681 cttttgcttt ttcataaaga gccttgacat tttcaacgcg tcctaaaaaa tcaactttta
    16741 ttcctaaaga ttttaccttg tattcaagtt cttgtcttaa ctgtccatct cctgctataa
    16801 caaatttata attttcttgt aaatttttat ccaaatgcgc tatagctttt aaaaacatta
    16861 cagggttttt gttgtgatct aaacgcccta taaaaagaac caaattttcc ttttcaaaac
    16921 tagaatcaaa agaaatttca tcgctaaaat gacaagggtt taataaaagc ttaacccttt
    16981 ctacaaatct ttcataatac accttatcac tgcttccaag cacacttaaa gcatcacaaa
    17041 aaggatagct tacccttctt aaaaaacgcc aaattttagg ttttaaatac gcttcattac
    17101 tatgctcact tataatgagt ggagttttaa gccctatttt cgcagcaata caagcaatat
    17161 tagtcgtatc caaaaaagaa ataaaaacat cagccttact ttctttcaaa gcctttctta
    17221 aagcaaaaaa tttcttaaaa cgacttgcga ttttatgata aagcgtgtca aatctaaatt
    17281 gttccaaact tgtaacttta acttcatttt caagcttata aaaagattct cctgcatgaa
    17341 atttaataat acttacttca tgctctttgc aaagtgcatt agctaaggtt actaaagcac
    17401 gctcagcacc tcctgaattt aaagttgcga taataaagct tattttcatc atttctcctc
    17461 tttaagctta ccgtgttcta aacgataaac cttatcacat tgtgttatcg tagaaaggcg
    17521 atgtgcgata ataatcatgg ttttatcttt agaaatttta taaatttcat ccataatttt
    17581 tgcttcactt tgagtatcaa gcgcagaagt tgcttcatca agcactaaca tttcaggctc
    17641 taaatataaa gctcttgcta tagctatgcg ttgtttttgt cccccgctta aattactccc
    17701 cccatcgccc acttttgttt gcactccttg aggtaaattt tttataaaat gctctaaatt
    17761 tgcttgtttg ataaccctat taagtttttc ttcatcaacc gcatctccaa aagtgatatt
    17821 tttagctata ctgtcattaa aaagatagat attttgcggg atatagccta ttttttggcg
    17881 ataatttttt gtattatttg catttaattc ttgctcatca attaaaattt gcccttcttt
    17941 tggttttaaa agtcctatga taagatctac taaggtactt tttccacaac cactctcccc
    18001 tataaaagcg attttttcgc cttttttaat atttaagtta agatttttaa ataaatattt
    18061 ttttccctca taaccaaagc taagattgca aattttaagc tcttgattaa agcttaattt
    18121 ttcctcgccc aaattttctt cttcttgtct taaattttga taaataatat ccaaagaaga
    18181 atgataataa agcaaatcat gataacttgt aataatacga tttgcacttg gcattaagcg
    18241 ataaagcgct aaaacaaaaa tagaaatcgt ggataaaata cctgaaatat cactttcatt
    18301 tttcaaaacc aaaaatacca cgataaaaac aagtacgcaa aagcctattc cttcaagata
    18361 aattcgaggc accgcagcta cgctttcgtt ggtaatattt gctttagaaa aagcttcact
    18421 ttgcgcttta aaaagactta atactccatc ttctttggtt ttaagcttaa taaatttgaa
    18481 attatttaaa tttgtattta aaa
//
LOCUS       DARATF010000029        18139 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.029, whole genome shotgun sequence.
ACCESSION   DARATF010000029 DARATF010000000
VERSION     DARATF010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18139
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.029"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            7..522
                     /gene="nrfH"
                     /locus_tag="SB502_000764"
     CDS             7..522
                     /gene="nrfH"
                     /locus_tag="SB502_000764"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HEG0434227.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            537..2369
                     /locus_tag="SB502_000765"
     CDS             537..2369
                     /locus_tag="SB502_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HEG0434228.1"
                     /translation="MKKNILRLGIVVLVLLIVGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADAKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            2505..3059
                     /locus_tag="SB502_000766"
     CDS             2505..3059
                     /locus_tag="SB502_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434229.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEYLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQK
                     STNEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            3123..3212
                     /locus_tag="SB502_000767"
     tRNA            3123..3212
                     /locus_tag="SB502_000767"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3157..3159,aa:Ser,seq:gct)
     gene            complement(3285..4277)
                     /gene="ceuB"
                     /locus_tag="SB502_000768"
     CDS             complement(3285..4277)
                     /gene="ceuB"
                     /locus_tag="SB502_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HEG0434230.1"
                     /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTIKTNTATVKVL
                     PISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVAGVPAKNLP
                     KYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNA
                     NFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKIS
                     AFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVIDRNIIVGNK
                     ERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
     gene            complement(4290..5045)
                     /locus_tag="SB502_000769"
     CDS             complement(4290..5045)
                     /locus_tag="SB502_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434231.1"
                     /translation="MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMNLKNYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNTNDKIKINEALEYMELSNLRNEFLDTLSGGQKQRVFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQINGKKICIYF"
     gene            complement(5042..5980)
                     /locus_tag="SB502_000770"
     CDS             complement(5042..5980)
                     /locus_tag="SB502_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEG0434232.1"
                     /translation="MRKKMLILSFLTLGMIGIFILVGLNGFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDVLILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISMVINFLGGIYFIYLVLKGNKL"
     gene            complement(5973..6941)
                     /locus_tag="SB502_000771"
     CDS             complement(5973..6941)
                     /locus_tag="SB502_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434233.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FTGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNL
                     GISYNGILFLGLMIVGIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKAYA"
     gene            complement(7027..8016)
                     /locus_tag="SB502_000772"
     CDS             complement(7027..8016)
                     /locus_tag="SB502_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEG0434234.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALKYEKQGDYKKAMEIYKKLALK
                     NSSVLISREQNNSSEATQMQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFAYSFNSLGVNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDFPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPENKKDDDNPAILHYMGNFDVNLAYLGDDYFINLMLRNNLK
                     FHNNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            complement(8013..8588)
                     /locus_tag="SB502_000773"
     CDS             complement(8013..8588)
                     /locus_tag="SB502_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEG0434235.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVNKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     KNELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFKSELR"
     gene            8651..9958
                     /locus_tag="SB502_000774"
     CDS             8651..9958
                     /locus_tag="SB502_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEG0434236.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRERFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILESLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSSLDEENSLLLKALEY
                     RKRADVLFANLSVLKDYEREFKLDDFEGKELEFKLEFNPKQSANLYYKNAKKLEQKAK
                     NLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDHKQEDLVANFYF
                     NEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARL
                     CVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD"
     gene            9960..10298
                     /locus_tag="SB502_000775"
     CDS             9960..10298
                     /locus_tag="SB502_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434237.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            10307..11032
                     /locus_tag="SB502_000776"
     CDS             10307..11032
                     /locus_tag="SB502_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEG0434238.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGVFVYSFWLSLLCSFFVAIFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVAFL"
     gene            11029..12099
                     /locus_tag="SB502_000777"
     CDS             11029..12099
                     /locus_tag="SB502_000777"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEG0434239.1"
                     /translation="MILFGSTGSIGVNALKLAALKNIRISALACGDNIALLNEQIARF
                     KPKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     KYKIKDLNQVSVKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAIDFSKIPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLDIAKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            12101..13495
                     /locus_tag="SB502_000778"
     CDS             12101..13495
                     /locus_tag="SB502_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HEG0434240.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKAINRELEVKLFNDR
                     ILLSLKNPRKVINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            13492..14499
                     /gene="tsaD"
                     /locus_tag="SB502_000779"
     CDS             13492..14499
                     /gene="tsaD"
                     /locus_tag="SB502_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEG0434241.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHSEALPKILKQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDMGILLVSGGHTMVLYLKDDASLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNIPLKHSKELAYSFSGLKNAVRL
                     EILKHENLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNTNLKLAPLKFCSDNALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSR
                     I"
     gene            14500..15015
                     /locus_tag="SB502_000780"
     CDS             14500..15015
                     /locus_tag="SB502_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEG0434242.1"
                     /translation="MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNL
                     KTLINDISIYTLKKDHLSSIKTMSNVSGVENVDLGNFNGTKEVNFRVGDDKECLKLLF
                     INKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGGM"
     gene            15015..16265
                     /locus_tag="SB502_000781"
     CDS             15015..16265
                     /locus_tag="SB502_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0434243.1"
                     /translation="MIVSKTYEIDSCDDVELDIKRESKLEFKLCFDDEKEIKALVFII
                     PGLGGDVDENYREHLAEFVAGEFNVAVASVNYHCIGNRPQTGSTFYLDDIDKLILKVS
                     CEAADIKLPYDVDKIQDYKQMSEIFHFVNNQIVEGKQKGNFTPNYFLNLHVSLQPAKN
                     EYQNFGIMQAQDLLNVALYLKKHAPFDTMGGGIPVIMIGSSHGGYLAHLAAKIAPWLI
                     DGVIDNSSYAKFLWRLIGFGKEMDFVQYSEFSTFDFFHHIKTHCSTKTFWTSNSSSNN
                     FFSIPRRMIRYILEPKHLEIQTNYPKPCYTSYHSFYDKEIAPPDEKLELYKYLEQFGF
                     DAELYMIKNPDQVDGRFIKSLEHGMGMSIKTLISKELPLMLEKIKQNPKKDCKEKYIS
                     YPCEDLLYKFSEKDDKISLKIDKI"
     gene            16275..18125
                     /locus_tag="SB502_000782"
     CDS             16275..18125
                     /locus_tag="SB502_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0434244.1"
                     /translation="MTILEKNIQALLSGVNEPLGNKLLKFIQNKTCFRFSIDENLNIY
                     DKTHNVFMYENLEEELNFFYQGILEKTPRYPFICIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALSTIDLSEELCSGKIYLVDVCEPKMELQLSILFDQKDMFEWLNLYEMFI
                     SCNFYKMYYQDVILKTDQTCMDNIFVVIRNFDPNDQLTTICYKQFLQNIPHLLQNIPF
                     QRLLSERKAKFDTAVVVSAGPSLHKQLALLRQYQENVVIFCADGALNMLENEGIVADY
                     VLNLDIEDLAVKFFNCSKSLDYSKTIAVLAVNTHPNVIDCLINKFLYCIALRDEYLYK
                     QFHLDDFGYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFDKDGNSHSKGFAFGENS
                     NAEKNFQLLQVPSYYKDGNKVTTHVSWNDYRIKLEYLIARNSEINFYNATEGGAYINF
                     AKNTSFKECCEKFFTQKKPCFDIPKTFTYNRSLKFLSKVFLHLKNDLQNAQDILRDAH
                     LLNNVLIGVVNIKNPLPLDFLQNIYKSIGDFNSVLDDDKFIQDGILKGVLYYRGSFLS
                     EAIKKDLKDEAYYLLNFISAYQKWLEKFIERLEIKNAIIKDTVLKYGNLI"
BASE COUNT         6504 a         2466 c         3031 g         6138 t
ORIGIN      
        1 taagaaatga taattttaag gaggaaaatt ttgaagaaaa cttcgaatct ttttactatt
       61 tttcttgttt tgctttttgt tttctttgcg gttgggtttt atacttttta taacgctaag
      121 ggcacatctt atttaagcaa tgcaagtgaa tcttgtaata actgccatat tatgaatgaa
      181 gtttataacg aatacatggc aggaccacac tctcaaaaag tcaaaggcga accaagagca
      241 acttgtgtgg attgtcattt gccacataat tttgtagcta agtggatagc taaagcgcaa
      301 agtggtttag gacatgctta tgcttttact tttaaacttg atgagttgcc tacaaatttg
      361 agtgcgactg aaaaaagcag aaaaatggtg caagaaaact gcatacgctg tcatgcagat
      421 tttgctcaaa cagctatcaa tgctacaaca aatccacatg cagacaagtc attaaattgt
      481 gcttcttgtc ataaagatgt tggacataaa cacggaattt aataaggaga agatgaatga
      541 aaaaaaatat tttacgcttg ggtattgttg ttttggtttt acttatagtg ggagttttat
      601 ggctaaataa tgatatcaat caaaaaaaag aagatgaagc aaataaaaat gccattgcag
      661 caaatgctga tttttctttg cttagtgatg atgatccaaa ttttgaaaaa tggggtaagg
      721 tttttccaga gcagctaaaa atgtatttaa cagttgaaaa agaagagcct aaagctactg
      781 aatttggtgg taatttagct tattcaaaat taattcgctt tcctcaatta accatacttt
      841 gggcaggata tccttttagt cttgatttca atgaagaaag agggcatttt tgggttcaag
      901 tagatcaaat gaaaacagca agaaacaaca aagattttct taatgctcac ggccttgctg
      961 cttttaaagg ccagcccgca gcttgtatga attgtcatag tggatggact ccatggctta
     1021 taaaaaatgt tgctaaagga gattttactg cttttaactc tacaaattat tggactatga
     1081 ttaaaaatat cccagccgtt gatggtatag tggaaaattc acctgaacat gcaggtccac
     1141 atggtggtaa aagaatgggt gtaacttgtg cagattgtca caatccaaat gatatgagtt
     1201 taagacttac tcgtccagca gctattaatg ctttagtttc tagaggatat gaaaaagatc
     1261 cagtgcaagg cgtaaaagct acaagagaag aaatgagaac tttagtttgc tctcaatgcc
     1321 atgttgaata ctattttaaa ccaacagggg aaaaagtaaa agtaatgggt gaaactattg
     1381 tagatgatag ttctaaaaaa tggtggaatg gaactcagaa aaattatgat gagtatgaat
     1441 tttggagaga tggtaataaa gctaaagaga ttgaaaccga tggtatagtt ttaacttttc
     1501 cttggagtga gtggaaaaaa ggacagccat ttagaattga aatgctagat gattattatg
     1561 ataaagttcg tggagtattt ggagctgatt ttactcataa attaacaggg gcacaaatta
     1621 ttaaaattca acatccagaa agcgaacttt atagtggcgg tgtgcatgct gcaaatgggg
     1681 taagttgcgt ggattgtcat atgccttatg ttagagaagg agctaaaaag gttactcaac
     1741 acaatatcac ttctccttta agagatatta actctgcttg taagtcttgt cataaacaaa
     1801 gcgaagatta tttaaaagct caagtgcttg acatacaaaa cagcgttgcg catgatcaaa
     1861 gaactgcaga gtatgcaatt gttagtttga ttatggatac taaaaaacta cgcgatgaac
     1921 taggtaatat ggaaaaattc caaagcgatg gaaaagctga tgcgaaaaaa attagcgaag
     1981 aactaaaaga agttttagaa cttcatcgta aagctcaaat gagagcggat tttgttaatg
     2041 ctgaaaactc aactggtttc cataatcctc gcgaagcttc aagaatgtta ttgcaagctg
     2101 ttgatatggc aagaatggga caaactaaac ttgtagaaat tgcagcggca aatggaatta
     2161 aagattttaa aacttcaaat ttaggttttg aagatattca aaaatttaat ccaggagagc
     2221 tttattataa agtagatgtt aataatcata aagctggaga gcgttactat gcagatgaaa
     2281 aagatgttaa tggcaatcct ccaaaagaac ttttagagca tgataaagag cttgctcctt
     2341 ataattatca agtgattgat aaaaaataat tcttaagccc tataatcata gggctttttc
     2401 ttttctttgt tttaaaaaat ataaactttt tatttaaaat tcacttttgc ttcactttgt
     2461 tttgtcaaaa tatcacaaat tttgataatc aaaaaggagt taaaatgatc aataaaaata
     2521 aattgtttag acaggttcat atctatctta gtttgttctt tttgccttgt gctttgcttt
     2581 ttgctttaac gggtatagcg tatatttttg gtattaatca agatgtgggc ttaaaagttg
     2641 agcagtatca attgtcaaaa gttatagaaa gtggtaaaga aagagaagct ttaatagagt
     2701 atttaaaaac aaatggttta aaagtaccat ctaatacaaa tataattaaa agtaaagata
     2761 aaggtataac aataggtgga actcattata gtgctaatat aactcaaaaa tctactaatg
     2821 aatacaatat taccttaaaa acaagatctt tacttggcga tatgattatg cttcataaag
     2881 ataagggtgc ttggtatttt tctgtgctta gtgtaggctt tggtattact ttatttatgc
     2941 tttatatttc agggcttatg attactttgt ttgcaaataa aaaagataga agtaagcaat
     3001 ttgcagttct tggagtaggg gttgttgtaa ctttgctttt ggcttatctt agcctttgat
     3061 ttttcctagc tttttaagct aggtattatt tatttttttg tataatcata ctttacttta
     3121 ttggacagat gggtgagtgg ctgaaaccac acccctgcta agggtgcaga tcttaacggg
     3181 tctcgagggt tcaaatccct ctctgtccgc cactaaaact ttcttgaaaa tcccaagtat
     3241 tttattaggt atcgaagcaa gagactagcc cttgcgaagt tatattattt tacagcgttt
     3301 ttgatttcta aaatcatagt ttttaaagac tctagtccat ttccacttgc taaataccag
     3361 tattctggat caagatagat gatctttttg ttttgtgctg ctttggtttt agcgacaagt
     3421 gcattatcga gtatgccttg agcgcgttct ttgttgccta caatgatatt tctatcaata
     3481 acaaaaatat aatcaggatt tttttctagt ataaattcag aattgatact tttgccgtga
     3541 gtgcctactt ttatattctc atctactgcg ttaatcccta aaacatcgtg aataatccca
     3601 aagcgagatt gaggaccaaa ggctgaaatt ttgttagaat ttgtaagaat gataagagct
     3661 tttttatctt catcaactat acttttggct ttttcaattt catttttaat atctgaaatt
     3721 ttttccaaag cttctttttc taaaccataa agttttgcaa cgcttaagac attgttttca
     3781 aaagagctta aaaaatttgc attatcaaga cctacaaata aagttggagc tatttctttt
     3841 aacttatcat aaaatttact ttggcgtcca gaaatgatga taagatcagg ttttaaagca
     3901 ttaatggctt caaaatcaac ttgttgtact ccacctacac taggtttgtt tttaaattgt
     3961 tgtaggtatt ttggtaaatt tttagcagga acgcccgcga ctttatcatt taattttaaa
     4021 gcatcaaaag tatctaaaat tccaagatct aagatcacta ccttagaagg atttttaggg
     4081 attttatttt ctcctagact atccttcact aaaaaactat caccctcatc gctcatacta
     4141 ataggcaaaa ctttcaccgt agcagtgttg gtttttattg tagaacttgc gttgttttca
     4201 tttgagtttg aattacaagc tgttaagatt agacttaaaa aaaatgcaaa aaatgcaaaa
     4261 actaaagatt ttttcatatt ttctcctttt taaaaataaa tacaaatttt cttaccatta
     4321 atttgactta cgggtatatc catatcataa atttgtttta aattttcttg attgatgatt
     4381 tcatcttttg agccttgttt taaaagcttc ccatctttta aggctatgat ttcatcagaa
     4441 taaatcgaag caaaattaat atcatgtaat acaacagcta tacttttgtt aaagtctttg
     4501 actaaatttt tcattagttg catgatttgt acgctatgct tcatatcaag attgttcaaa
     4561 ggttcatcaa acattataaa ttcagtatcc tgagcgatga tcatggctat aaaaactctt
     4621 tgtttttgtc cgccgcttaa tgtatctaaa aattcatttc ttaagttgct aagttccatg
     4681 tattctaaag cttcattgat tttgatttta tcgtttgtat taagtcttcc ttgagaatgc
     4741 ggaaaacgcc caaaagcgac tagttcttca acttttaatc ttaaattgat attgttttgt
     4801 tgtttgagaa tggaaatttt ttgtgctaag atttgctctt tataattttt taaattcatt
     4861 ccatcgatat aaatttctcc actactaggt tttatcaaac gacttgctag agctaaaaga
     4921 gtggattttc cagcgccatt ggctcctatt atagaagtga ttttgccttt atgaaaatca
     4981 aggctaagat ctgaaataat gactttatta tcataaaatt tggtgatatt ttttagttta
     5041 atcataattt attacccttt aatacaagat agataaaata tatcccacct aagaaattaa
     5101 taaccatgct tatagtggca ttataatcaa aaactctaga gacaaaaaac acccctccaa
     5161 gcaaagccaa aatactaata agtatacaag cgcttagcaa aatactatgc tttgcagttt
     5221 taaatagttc ataagtgata tttaccacca aaagccctaa aaaggttata ggacctacaa
     5281 gtgcggtgct aatagaagtt aaaatagcta tgataatcat caattgtttt gaaatttttt
     5341 gataatttat ccctaaattt atcgctaaat ctttgcctaa atttaaagga tctaaaaatt
     5401 tcatatagcg aaaaatccat ataaaactta aaaagctaat gatataagca agaattaaaa
     5461 catcaaaagc aatattatcg aaactagcaa acattcttcc ttgtattacc atgaattcat
     5521 cagggtcgat taatacttca aaaaaagagc ttaaagtgct aaaaagtgtt ccaaaaacta
     5581 agcctaaaag catgataaga taaatacttc tatcgctact aaataaaatt ttataaagtc
     5641 ctagtgaaaa aaccaccata caaactagag tgattaaaaa attgatatcg tttttataaa
     5701 cacttaaatt agctgcacca aaagaaaaga taagagcact ttgaagtaac atatataaag
     5761 aatctaatcc tatgatggca ggggttagaa ttttgttatt gcataaagtt tgaaagatta
     5821 ctgttgaaac agcgatacaa atagctacta tgataatagc tgcaatttgt aaaaaacgac
     5881 tttttaaggc atactcatca aagccattta aacccacaag tataaaaatc cctatcatac
     5941 caagtgttaa aaagcttaaa atcagcattt ttttacgcat aagctttcct ttttagcaaa
     6001 agaaagataa agattaaaga tcctaaaaca cctgtagtga tacttaaagg catttcaaaa
     6061 ggaaagatga caagtcttga aatgatatcg caaacaagta aaaacaaagc tccacaaagt
     6121 gctatataga taagattttt tctaagatta tcacctagat aaagagctac taaatttggg
     6181 ataattagcc ctaaaaaagg gataattcca acgcttacaa tcactaagct agtgataatg
     6241 cctacaatca tcaagcctaa aaataatatc ccattataag aaattccaag atttaaagct
     6301 atatcttcgc ccatgccaac tatggtgatt ttatgagcta aaaaataagc aagtataaaa
     6361 agtggtaaag aaatgtagag caattcataa tttccctgca taacatttgc catactgcct
     6421 tgtaaccagc cttggatatt ttgtatataa tttaaagcat aggcaaaaaa agtagttata
     6481 gcactaataa tgcctccaaa catcaagcct atcaaaggta caaaaatcac atctttgagt
     6541 ttgatttttc ttaaaatttg aataaatata aaagaaccca aaagtgcaaa tacagaagca
     6601 atgatagctt gagtgaaaaa agacgctcca gtaaaaaata ttaaagaaat aagtatgcca
     6661 aatttagcac aatccatagt ccctgctgta gttggagaaa cgaatttatt ttgcgtgagt
     6721 tgttgcatga taagcccaca tatactaaga ctcattcctg tgagtaaaat cgctataagt
     6781 ctaggaattc ttgtgagggt tatgatttct agttgagtgg agttaagatt aagaatatct
     6841 tttacattga tactgataac tcctataaat aaacttatca ttccaaagaa taaaagtaaa
     6901 gctataagca cttttaaact caatatatgc ttaaaaaaca aatctttcct tatagtaata
     6961 ataattatca aaaatgaaat tgtaatgaaa tttgttttaa gaaatgataa aactacaaag
     7021 gatattttag taagaaatca aaaatccagt ggaaagtctt tgcaagtgtt tgttatagtc
     7081 tataaggctt tctccatagc cattaaagta ttgtaaatac caataaattc cgttattaaa
     7141 aatatcatat cctagatcaa cttgtatagc acctttgtta ttgtggaatt taagattgtt
     7201 tcttagcata agattgataa aataatcatc gcccaaatac gctaaattca catcaaaatt
     7261 tcccatataa tgcaagatag caggattatc atcatctttt ttgttttcag gaattctata
     7321 ccaaaggcgt ggaacaaata aaaatttatt atataaaata gcagtagata cataaattct
     7381 attccatgag cgagattgta aattctcatc tcccttgcca ttgctttcat gcaatatacc
     7441 tacgcgtaga ttgttaaaaa attcataatc tttaagatac aaaggaaaat ctataaaaaa
     7501 ttctggttga tagttggttt ctctaaaagg agaagaatgc tcataaattt gccaccaaga
     7561 agtttgagta taggctatat aatatttttc atctagtcct agtaaatttt caaaaagtct
     7621 ttttttaaca ctaagttgga atttcgcctc actcttatta ttatttactc ctaaagaatt
     7681 aaaactataa gcaaaaggta aaaaataatt catcttataa gagctaatgc caaggggatt
     7741 aaagctttca ttttcaccaa gataattagc caaagctaag cgagaaaagt cttgtttttc
     7801 ttcttttttt atagtgatag aattttgcat ttgtgttgct tcgcttgagt tattttgttc
     7861 tcgagaaatc aaaacagatg aattttttaa agcgagtttt ttgtaaattt ccatagcttt
     7921 tttataatcg ccttgttttt catactttaa agcttgttgt aaatcactag cccatataaa
     7981 aacgcataag cttaaaaata aagcaatttt tctcatctta actcgctttt aaatttttca
     8041 tattcttcat aaaaattaag atttaaaaaa gcatcttcat cttcaaattc tacaaatttg
     8101 gttttaatct cagaaaataa aagtcctatt ttttgttcat ttttttctaa gaaattttta
     8161 caagtttgag ctaaagagct gtgataaaag ccacataagg gatgtttatg taaaggggtt
     8221 ttggctatga ttattttata gttttgctct aaaaaaggaa gcatttttaa aagctcattt
     8281 ttacctactt taggactatc tacacttaaa acaaaaacaa attcattttt aaaatttgaa
     8341 agtatagagt aaagcgcaag cataggagag taaacttcaa attctaaaga atcttttatc
     8401 aagctaaaat ggttttcaaa tttgtcttct ttcgcactca catagacatt tttaaaaatt
     8461 ttagaaaatt tatttacttg aaattgagtt aaattttgat ttttaagaat caatttgctt
     8521 ttatcttgtc ccatacgact agatttacca ccacataaaa tcacgcaatt tagctcatta
     8581 agctgcacaa atttcctttt ttaatgtaat tctaccacaa aattcgccaa aatattttat
     8641 aatttctttt atgaaataca cagaactttt acaattacaa actttttttt ctcagtttaa
     8701 aaaaatcgat tttatcaagc gtatcaatga caatattttg gaattaagct ttgatagaga
     8761 aagatttatt tttgatctta ctcgtgcaat gagtgcgatt tatacagcta aatttaatgc
     8821 aaaaaattat aatgcacctt ttgattttat gcttaaaaag tattttagca atgcttttat
     8881 aaaggaagtt aaagtccttg aaggcaatcg tattttatgt tttagtgtaa aagctaataa
     8941 ggcttataaa agctatgaga gcaaaattta ttttgaattt acgggtaaaa ataccaatgt
     9001 tattcttaca gatgaaaaag atttgatcat agaggcttta aggcacattg ataaaagtta
     9061 tcgtgttgta aaacctaatg tgattttaga gtctttaaag ccttataaaa tggatgaaaa
     9121 ttttgaggaa attaaagact ttgcagatta tttttctcgc aaatttacaa gcatttatga
     9181 gagtaaaatc aaacaaataa aaaatttaaa acttgcacaa gtggataaaa aaatacaaaa
     9241 tttacaagaa cttttttcta gtttagatga agaaaattct ttactcttaa aagctttaga
     9301 atacagaaaa agggctgatg tattgtttgc aaatttgagt gttttaaaag attatgaaag
     9361 ggaatttaag cttgatgatt ttgaaggcaa agagcttgaa tttaagcttg aatttaatcc
     9421 taagcaaagc gctaatttat attataaaaa tgctaaaaaa ttagaacaaa aagctaaaaa
     9481 tttaaacata caaagacaaa atttaaaaga aaagttagat tttaccttga gtttgaaaga
     9541 attattgctt caagctaaga gtgagataga gcttgaaatt ttactaccta aaaaaaatag
     9601 caaaaaaaat caagatcata aacaagaaga tcttgtggca aatttttatt ttaacgagtt
     9661 taaaatttgc gtgggtaaaa atgaaaaagg caatgaattt ttacttaaaa atgctaaaaa
     9721 agatgatttg tggcttcatg taagggatat tcctagcgca catactttga ttgtatcaaa
     9781 caagcaaaaa atcagcctcg atgtgataga atttgctgca aggctttgtg taagcttttc
     9841 taagttaaag aaaggttcgt attgggtcga ttatacctta aaaaattttg ttaaggttca
     9901 gcaaaaggcg tttgtaaatt atacaaattt taaaagtatt aatatcacaa aggattaaaa
     9961 tgccagttag ccctttagga aatatcaatt atataaatca gaatatggct tatccagcta
    10021 cacaagcaag caatgagctt gcaaaagaag gttttgcagc tacgctaaat atggctgaat
    10081 ttaatgaaaa agaaaaaact ttaaacaagc ttgagaaagt caatgagact catgaaatca
    10141 aagaagagat caaagaaaaa gccgaacaag aagaaaaaaa gaaaaaacac aatcaagaag
    10201 ctaaaaccag cgatgatgag aaaaatgaag aagatgagtc taaagatcca aattttaaag
    10261 acgcacaaag cattcatcgc ttagatatta gtatataagg aaaaatatgt ttaatacaac
    10321 tagaattatt tcagctcttg tgatgatagg ggctattatt attatcgcgt tgattgatca
    10381 attttttatc aattttatcg tttttgcggt tttattgtat ttatctttta gtgaagcaaa
    10441 aaaacttttt gctttagaaa atatttctat tatccctttg gctatagctt ttattttggg
    10501 aagtttatcg cataaagctt tgctttttgg gattttagct ttgttattag tcgttggata
    10561 tttggtttat aaaaaggctt ccttaaaacc agctcttatt tatatttatc ctagtttgcc
    10621 tattttagca ctttggcaag tgtatttaga tcagggtatg tttgcgcttt tttggcttat
    10681 cattatcgtt gcagcttgcg atagtggggc gtattttatc ggaaaactta tgggtaaaac
    10741 tcctttttct ccaacaagtc caaataaaac cttagaaggt gttataggtg gtttgatttg
    10801 tgcgagtgtt attggaacta ttttgggagt ttttgtttat agtttttggc tttctttact
    10861 ttgttcgttt tttgtagcga tttttgcagt gattggagat ttgcttgaga gttattttaa
    10921 aagagaagca ggtgtaaaag atagtggaga tcttatccct ggtcatggag gtgtgcttga
    10981 taggatcgat gcagtgatca ttgctgcttt tgtgatggtt gcttttttat gatacttttt
    11041 ggaagcacgg gcagcatagg agtaaacgct cttaaacttg ctgctttaaa aaacattcgt
    11101 atttctgctt tagcttgcgg ggataacatc gctcttttaa atgaacaaat cgcaaggttt
    11161 aaacccaaat ttgttgccat aaaagattca aaaaataagc atttagttaa acacgataga
    11221 gtttttatag ggcaagaagg tttagagcaa attttaacag aatgtcaaga taagctttta
    11281 ctcaatgcca ttgtaggttt tgcaggactt aaaagcactt taaaggctaa agagcttggc
    11341 aaaaacatag ctttagctaa caaagaaagt cttgtagtag ctgggagttt tttgaaaggg
    11401 gctaaatttt tacccgttga tagtgagcat gcagctttaa aatttttact cgaaggtaaa
    11461 aaaaatatag caaaacttta tatcacagca agcggcggag ctttttataa gtataaaatc
    11521 aaagatttaa atcaagtcag tgtcaaagat gctttaaaac atcctaattg gaacatggga
    11581 gcaaagatca ctatagatag tgcgactatg gcaaataagc tttttgagat tatagaggct
    11641 tatcatttat atgattttaa agaaattgat gctttaatag aaccaagatc tttagtgcat
    11701 gcaatgtgtg aatttaaaaa tggagctagc acggcgtatt tttcaaaagc agatatgaaa
    11761 ctagctattt cagatgctat atttgaaaaa caagatacgc ctattttaga ggctattgat
    11821 tttagtaaaa tacctgcttt aaaatttcat ccaatcagca caaaaaaata ccctattttt
    11881 aagcttaaaa atacattttt aaaagagcca aatttaggtg ttatcatcaa tgctgctaat
    11941 gaagttggtg tttataattt tttagaaaat aaaagtggat ttttagacat tgctaaatgc
    12001 atttttaaag cccttgatca ttttggagta cctaaaattt caagcataga agaagttttt
    12061 gagtatgatt ttaaaacaag agagtattta aggagttaaa atgaaatttt ttttaacaat
    12121 tttatttttt ataacaagca tttttgcttt agagctagac tttagcgtag gagaaaatgg
    12181 aaaaagtcta gatgataata atacagtttt aatttttggt ggaattcaag gcgatgagcc
    12241 tggtggattt catgcggcaa gtttgctttt gagtgattat aatatcacta agggtaagat
    12301 tatagtggct ccaaatttag cttttgatag cattatcaag cgttctcgtg ggaataatgg
    12361 ggatttaaac cgtaaatttg caagcattag cccaaaagat cctgattata aaaccgttca
    12421 acgcattaaa gagcttattt tacttcctga agttagtatg gtgatcaatc ttcacgatgg
    12481 ttggggtttt tataaaccta cttatatcga tgcgatgcaa aatcctaagc gttggggaaa
    12541 ttcaagtgtg attgatacaa gcgaaatcaa tgcaagcaaa taccctgatc ttgaaaatat
    12601 cgccactcaa accgtaaata gtgtcaattc ttcacttgct gatccaaagc atgcttatca
    12661 tcttaaaaac accaaaaccc aagagcttgg cgatacggaa atgcttaaag ctttaactta
    12721 ttttgtgatt tcaaatcaca aagccgcttt tgcaaatgaa gcaagtaaaa atctgcctgt
    12781 aaatttaaga gcttattatc atcttttggc aattgaaaat tatttaaaaa ctgcaggaat
    12841 tgaatttagc agagatttcg aactcactcc acaaggggtt gataaagcca taaaccgaga
    12901 gcttgaagtg aagcttttta atgatagaat tttactttct ttaaaaaatc caagaaaggt
    12961 tatcaactat gtgccttttc cggtaaataa agagttaaat tataacacaa gtaatgaact
    13021 tactgctgtt atcgcagaag gaaattcttt ttatatccag tatggcaatc gttttcaaac
    13081 aagattatat cctgagtatt tagaatttag cgatgctttt aatgaggtaa cttttcaagt
    13141 tgatggcaat gaaaccaccg ttccttttgg aaccaaggtg aaagtaaaag agaattttct
    13201 tattccaaag atagctaatg tgcgcgtaaa tatcataggc tttgatcact caaaagatga
    13261 aagtggtatt ttagttcata aaaaaaatat gcaaacacaa tattctttag acatggcagg
    13321 taaaatttat agagtggaat tttatgagtt aagaggtgca aatttgcaac aacttttaga
    13381 ggcaaatatc aatagcaagt tgatcaaaaa cgctaaaaat ttggatttaa atactcttaa
    13441 aatggcaaga tcaaaagata aattcttagg ttctatttta gtggaatttg aatgaaaaat
    13501 cttatcctag ctatagaaag ttcttgtgat gatagttcta tagctatcat tgataaaaat
    13561 accttagaat gtaaatttca taaaaaaatt tcccaagaat tagatcatag tatctatggg
    13621 ggagtggtac ctgaacttgc tgcaagactt catagcgagg ctttgccaaa gatacttaag
    13681 caatgcaaag agcattttaa aaatctttgt gccatagctg tgacaaatga acctgggctt
    13741 agcgtttctt tgctcagtgg aatttctatg gcaaaaacct tagcaagtgc tctaaattta
    13801 cccttaatcc ctataaatca tcttaaaggt catatttata gtcttttttt agaagaaaaa
    13861 atttctttag atatgggaat tttacttgtt agtggtgggc acactatggt gctttatctt
    13921 aaagatgatg caagcttaga gcttttagca agtacaaatg atgatagctt tggagaaagt
    13981 tttgataaag tggctaaaat gatgaattta ggttatcctg gtggggtcat catagaaaat
    14041 ttagcaaaaa acgccaaact taaaaatatc tcttttaata tacctttaaa gcattctaaa
    14101 gaactcgctt atagtttttc agggcttaaa aatgcagtgc gtttggaaat tttaaagcat
    14161 gaaaatttaa gcgatgatat aaaagcagaa atagcttatg cctttgaaaa tacagcttgt
    14221 gatcatatca tggataaatt agaaaaaatt tttaatcttt ataaatttaa aaattttggc
    14281 gttgtaggtg gagctagtgc aaatcttaac ttgcgttcgc gtttgcaaaa tttatgtcaa
    14341 aaatataata caaatttaaa actagctcct ttaaaattct gctctgataa tgctttgatg
    14401 atagcaagag ctgcggttga tgcttatgaa aaaaaggaat ttgtaagcat agaagaagat
    14461 attttaagcc ctaaaaataa aaatttttca aggatataaa tgaaaaaagc ttttaccata
    14521 ttagaacttg tttttgtgat tgttatttta ggaattttag ccgctattgc tttaccaaaa
    14581 atgagttcaa gtaaggatga agctgaagtt agtaagtctt taaataacct taaaactttg
    14641 atcaacgata taagcattta tactttaaaa aaggatcatt taagctctat aaaaacgatg
    14701 agtaatgtaa gtggggttga aaatgtcgat cttggcaatt ttaatggcac aaaagaagta
    14761 aattttcgcg taggcgatga taaagaatgc ttaaaacttc tttttataaa taaagctgat
    14821 tttatactca tgggaatttc aagcaatgaa gcaagtaaaa atgctatcat taacgcagcc
    14881 aatcaaagcc atgaagattt agaaaatata gactttacaa gctcttctag taataaagct
    14941 tgtgtgatct taagtaagaa tgaaaatttt aaaaacctag cgagtaaaac ttatctttta
    15001 atagggggaa tgtaatgata gtgagtaaaa cttatgagat tgactcttgt gatgatgtag
    15061 aacttgatat aaaaagagaa tcaaagcttg aatttaagct ttgttttgat gatgaaaaag
    15121 aaataaaagc tttagtgttt atcatccctg ggcttggtgg agatgtggat gaaaattacc
    15181 gtgaacactt agctgaattt gtagcaggcg aatttaatgt ggctgtagca agtgtgaatt
    15241 atcattgtat aggtaatcgt cctcaaactg gatcaacttt ttatttagat gacatagaca
    15301 agcttatttt aaaagtaagt tgtgaagctg cggatatcaa gcttccttat gatgttgata
    15361 aaattcaaga ttataaacaa atgagtgaaa tttttcattt tgtaaataat caaatagttg
    15421 aaggtaagca aaaaggtaat tttacaccaa attattttct aaatttacat gtgagtttgc
    15481 aacctgcaaa aaacgaatat caaaattttg gaatcatgca agctcaagat cttttaaatg
    15541 ttgcacttta tcttaaaaaa catgctcctt ttgatactat gggggggggt ataccagtta
    15601 tcatgatagg tagttctcac gggggatatt tagcgcattt ggcggctaag attgcacctt
    15661 ggctaataga tggagttata gataactcaa gttatgctaa atttctttgg cgtcttatag
    15721 gttttggaaa ggaaatggat tttgtgcaat atagcgaatt ttctactttt gatttttttc
    15781 atcatattaa aacacattgc tcgacaaaaa ctttttggac aagtaattca agttcaaata
    15841 attttttttc aataccaagg agaatgataa gatatatctt agaaccaaag catcttgaaa
    15901 ttcaaacaaa ttatccaaaa ccatgctata caagttatca ttctttttat gataaagaaa
    15961 tagctccacc tgatgaaaaa ttagaacttt acaaatattt agaacaattt gggtttgatg
    16021 cagagcttta tatgataaaa aatccagatc aagttgatgg tagatttatc aaaagtttag
    16081 aacatggcat gggaatgtct ataaaaactt taatttccaa agaacttcct ttaatgctag
    16141 aaaaaataaa acaaaatcca aaaaaagatt gtaaagaaaa atacatctct tatccttgtg
    16201 aggatttgtt gtataaattt agcgaaaaag atgacaaaat atcactaaaa atagataaaa
    16261 tttaaggaaa tctaatgacc atactagaaa aaaacataca agctttatta agtggggtaa
    16321 atgaaccctt aggaaataaa cttttaaaat tcatacaaaa taaaacttgt tttcgtttta
    16381 gtatagatga aaatttgaat atctatgata aaactcataa tgttttcatg tatgaaaact
    16441 tagaagaaga attaaatttt ttctatcaag gtattttaga aaaaactcct agatatcctt
    16501 ttatatgtat ttatggtata ggcaatgctt tactgattaa aaatttagct aaacactata
    16561 aacatctttt tgtatttgaa agtgaaatag aactttttat cctagcttta agcacgatag
    16621 atttgagtga agagctttgt agtggaaaaa tttatcttgt ggatgtttgt gagccaaaaa
    16681 tggagcttca gcttagtata ttatttgatc aaaaagatat gttcgaatgg ttaaatcttt
    16741 atgaaatgtt tataagttgt aatttttata aaatgtatta tcaagatgtt atattgaaaa
    16801 ctgatcaaac atgtatggat aatatttttg tggttattag aaattttgat cccaatgatc
    16861 aattaacaac tatttgctat aagcagtttt tgcaaaatat accccattta ttacaaaata
    16921 taccttttca aagactttta agcgagcgta aggccaaatt tgatacagcc gttgtagttt
    16981 cagctggtcc tagtcttcat aaacaacttg ctttgttaag acaatatcaa gaaaatgtag
    17041 ttattttttg tgcagatggt gctttaaata tgcttgaaaa tgagggtatt gttgcagact
    17101 atgtattgaa tttggatata gaagatttgg cagtgaaatt ttttaattgt tcaaaatcct
    17161 tagattattc taaaaccata gcggttttag cggtcaatac gcaccctaat gtgatagatt
    17221 gtttaataaa taaatttctt tattgtatcg cgctaagaga tgagtattta tataagcagt
    17281 ttcatttgga tgattttggt tatatagata caggtaccca tgtaagccat ttttcttata
    17341 ctttagcttt ggctttagga tttaaaaata tcattatgat aggacaagat ttagcttttg
    17401 ataaagatgg aaattctcac tctaaaggtt ttgcatttgg tgaaaattca aatgctgaaa
    17461 aaaattttca acttcttcaa gtcccatctt attataagga tggtaataaa gttaccactc
    17521 atgttagctg gaatgattat cgcataaagc tggaatatct tattgcaaga aatagcgaga
    17581 taaattttta caatgctaca gaggggggtg cttatattaa ttttgcaaag aatacaagtt
    17641 tcaaggaatg ttgtgaaaaa ttttttactc agaaaaaacc ttgctttgat attccaaaaa
    17701 cttttactta taatcgttca cttaaatttt tatctaaagt ttttttgcat ttaaaaaatg
    17761 accttcaaaa cgctcaagat attttgcgag atgctcattt gctaaataat gtcttaattg
    17821 gcgtagtaaa tataaaaaat cctctgcctt tagatttttt gcaaaatatt tacaaaagta
    17881 tcggtgattt taattctgtt ttagatgatg ataagtttat acaggatggt attttaaaag
    17941 gggtattgta ttatcgtggg agttttttat ctgaagctat aaaaaaagat ttgaaagatg
    18001 aggcgtatta tcttttaaat tttattagcg cttatcaaaa atggcttgaa aagtttattg
    18061 agaggctaga aataaaaaat gccatcataa aagatacagt gttaaaatat ggaaatttga
    18121 tataaaattt tataaaaac
//
LOCUS       DARATF010000030        17843 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.030, whole genome shotgun sequence.
ACCESSION   DARATF010000030 DARATF010000000
VERSION     DARATF010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17843
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.030"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..545)
                     /locus_tag="SB502_000783"
     CDS             complement(<1..545)
                     /locus_tag="SB502_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEG0434245.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFEKVFEFGCG
                     RGEFSKKLQNFITFNKYLKNDILNFKENSNILIFDMNEIAKQDLSKEKFDLIVSNATL
                     QWLDLKRIILSLRDMLNQNGILLLSTFAKQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELVELSFDNALEV"
     gene            complement(542..1153)
                     /locus_tag="SB502_000784"
     CDS             complement(542..1153)
                     /locus_tag="SB502_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEG0434246.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASYPSHFSHLKSDKNVILFYDY
                     ENFDLNFNFKAFDELFLIAFSIGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPT
                     IFKKTLQNFKLEHFKEALFKERKSLAKDFIFKDEKSLKIELEKLFDFALTKQEENLLW
                     DKVYSSKEDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEL"
     gene            complement(1150..2292)
                     /locus_tag="SB502_000785"
     CDS             complement(1150..2292)
                     /locus_tag="SB502_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HEG0434247.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDQKLLNLAGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEELESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLADKFIHASMIDGLRLGEADFFRFHHKNMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDKEGL
                     GLVKKLALENEVDFLVFTFGKAIASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHTVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHTGLNTEELERIIELL"
     gene            2360..3643
                     /locus_tag="SB502_000786"
     CDS             2360..3643
                     /locus_tag="SB502_000786"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEG0434248.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKITNAIKKQVDKLEHVILAGFTHEPIIKLSARLCEKV
                     GHDFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEAGFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(3630..4235)
                     /locus_tag="SB502_000787"
     CDS             complement(3630..4235)
                     /locus_tag="SB502_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEG0434249.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(4245..4559)
                     /locus_tag="SB502_000788"
     CDS             complement(4245..4559)
                     /locus_tag="SB502_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0434250.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(4562..4900)
                     /locus_tag="SB502_000789"
     CDS             complement(4562..4900)
                     /locus_tag="SB502_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0434251.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            5032..5568
                     /locus_tag="SB502_000790"
     CDS             5032..5568
                     /locus_tag="SB502_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEG0434252.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            5565..6110
                     /locus_tag="SB502_000791"
     CDS             5565..6110
                     /locus_tag="SB502_000791"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEG0434253.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHTKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            6112..7170
                     /locus_tag="SB502_000792"
     CDS             6112..7170
                     /locus_tag="SB502_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEG0434254.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFF
                     APFLMLVMYYFFPVIARFFNLAIVTFVAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            7214..8422
                     /gene="lysA"
                     /locus_tag="SB502_000793"
     CDS             7214..8422
                     /gene="lysA"
                     /locus_tag="SB502_000793"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEG0434255.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYVKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECESDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQAQESLCDVVGGICESGDFFA
                     KARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            8424..9191
                     /locus_tag="SB502_000794"
     CDS             8424..9191
                     /locus_tag="SB502_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HEG0434256.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLAIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            9179..10252
                     /gene="pheA"
                     /locus_tag="SB502_000795"
     CDS             9179..10252
                     /gene="pheA"
                     /locus_tag="SB502_000795"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEG0434257.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            10242..11336
                     /locus_tag="SB502_000796"
     CDS             10242..11336
                     /locus_tag="SB502_000796"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEG0434258.1"
                     /translation="MKFNEFLNHLSNYEPGKDIEVIAKEYGVKKVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHAKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLKPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAINDDEFAK
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDKKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            11388..13070
                     /gene="fliF"
                     /locus_tag="SB502_000797"
     CDS             11388..13070
                     /gene="fliF"
                     /locus_tag="SB502_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEG0434259.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            13070..14098
                     /gene="fliG"
                     /locus_tag="SB502_000798"
     CDS             13070..14098
                     /gene="fliG"
                     /locus_tag="SB502_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEG0434260.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            14106..14936
                     /gene="fliH"
                     /locus_tag="SB502_000799"
     CDS             14106..14936
                     /gene="fliH"
                     /locus_tag="SB502_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEG0434261.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENANISLNDEKPVEENQVIASTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFAKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            14929..16776
                     /locus_tag="SB502_000800"
     CDS             14929..16776
                     /locus_tag="SB502_000800"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEG0434262.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDTKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNSCEIKLGKAQWLVKNSSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVLKFYH"
     gene            16862..17272
                     /gene="perR"
                     /locus_tag="SB502_000801"
     CDS             16862..17272
                     /gene="perR"
                     /locus_tag="SB502_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HEG0434263.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYTEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCAKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDSCKKCH"
     gene            17318..>17843
                     /locus_tag="SB502_000802"
     CDS             17318..>17843
                     /locus_tag="SB502_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434264.1"
                     /translation="MVYEIQKNFLLSDCTLLENLKKDNIPFRNSKFETFYTQITSNHS
                     VKFQSFCNEFYKITKFNNSILEQNQEEKISKKKFEKARKKIIGKSIKKERFEFKFCSL
                     KSYIDIYEEPKICILKIFFPTLDSSNEFKIPKDFKIQKELHHDLNSKHIVLYGFEYQN
                     FDIEKYFKIIEKNQN"
BASE COUNT         6417 a         2342 c         3103 g         5981 t
ORIGIN      
        1 aaaacttcta aagcattatc aaagcttaat tctacgagtt cttgagtgat ttttacctca
       61 ttaaaataga ctttaaaaat ttgttctaat tcatttaagc taaaataatt taaaccaaac
      121 cccgtacttt gtttgatttc ttttaaattt tgttttgcaa aagtagaaag aagtaaaatt
      181 ccattttgat ttagcatatc tctaagactt agtataatgc gttttaaatc aagccattgc
      241 aaagttgcat ttgaaacaat aagatcaaat ttctctttac ttaaatcttg ttttgcaatt
      301 tcattcatat caaaaattaa aatattagaa ttttctttaa agtttaaaat atcgtttttt
      361 aaatacttat taaaagtaat gaaattttga agttttttgc taaattcacc cctaccacaa
      421 ccaaattcaa acactttttc aaaatgtgaa atttttaaat cttttaaaat ttcacaaagt
      481 tttaaaccca tgaaatcttg cacttttgca tgtttttcat aatcttttgc ttttaaaaaa
      541 ttcaaagctc atcccaagtt ttaaaatgaa aaaaagcaaa atgcggttca tctaaaaaaa
      601 tcaaattttt aaaactattt ttcaaggcat ttggtggaaa aatttcatct tctttacttg
      661 aataaacctt atcccaaagc aaattttctt cttgttttgt taaagcaaag tcaaaaagtt
      721 tttcaagctc tattttcaaa gatttttcat ctttaaaaat aaaatctttg gctaagcttt
      781 tgcgttcttt aaataaagcc tctttaaaat gttctaattt aaaattttgc agggtttttt
      841 taaaaattgt aggatgaatt ccttttgatt tatctatgcc taaatttgta ccatttatgg
      901 ctattttttg cttaaaatta agctctttta aaagtctatt tgccacacaa acccctatag
      961 aaaaagcgat taaaaaaagc tcatcaaaag ctttgaaatt aaaatttaaa tcaaaatttt
     1021 cataatcata aaataaaatc acatttttat cgctttttaa atgcgaaaaa tgactaggat
     1081 atgaagcaaa ccctccaaat accactataa gtttttttga atcaggattt ttgcataaaa
     1141 attcatattt cataaaagct ctattatcct ttcaagttct tctgtgttaa gtcctgtgtg
     1201 taaagaaaaa cgaattctag ctgtattttt tggcacagta ggttctttaa tcgcaggagc
     1261 aaaaaaacca gctttttgaa gtttttgtga aatttctaag gcttttttat tttcacctaa
     1321 aagcaagcaa ataatataag catcacctaa aacagtgtga tttttttctt gcaatttact
     1381 tttaaaaaaa gtacttaaaa gttctaattt ttctctttct ttcttaaaat aaggcatttt
     1441 tttaaaaata aattgtgtcc aagctacatt aataggtggc aaagctgtag aataaataaa
     1501 agctctagct ttgttgatga aaaatttttt atatttttca tcacatatta tacaagcacc
     1561 catggaagca atggcttttc caaaggtaaa aaccaaaaaa tccacttcat tttctaaggc
     1621 tagtttttta acaagcccca aaccctcttt atcaaaacaa cccacgctgt gtgcttcgtc
     1681 tatataaagc ttgattttat cataacgtct tttaagctca cacaaagttt taaaatcgct
     1741 aaaatctcca tccatactaa acaaagcttc gcttaaaacg atgatatttt cataattttc
     1801 ataatgtttt tggattaaac tctctaaatg attcatattt ttgtgatgaa aacgaaaaaa
     1861 atcagcctcg ccaagtctta agccatcaat catacttgca tgaataaatt tatcggctaa
     1921 aaaaagcgtc ttagaaacgc tagaaagtgc tgctatacaa gagatattta gatgataacc
     1981 actattaaaa tgtaaaattt ccttatcttt aaatttagtc tttaaaaaac tttctaattc
     2041 ttcataaatt tcaaaatttc cactcaaact tcttgaactc gaacttgaaa aaaacaaatc
     2101 ttgctctttt agggtgttta aaaactcagc ttttaactct ttagaagacg ccaaataaag
     2161 ataatcattt cctgctaaat ttaaaagttt ttgatcttgt ttataaacaa atttattttc
     2221 atgttttaaa ggcgttagag ttcttagatt gtgattttgc tctagatctt gcaaaatttt
     2281 ttcaagcttc atttttttcc tgtaaattta aaaatttaaa gtattatttt gccaaaatat
     2341 ttttaaaaaa gaagttataa tgcaaaatca aatcttaaaa aatctcgatt taaaacacat
     2401 ttggcaccct tgcacacaaa tgaaagatca cgaaactcta cctttaattc ctataaaaaa
     2461 agcaaaaggt gtatggcttt atgattttga tgataaagct tatatggatt gtgtgagttc
     2521 ttggtgggtc aatctttttg gtcattgtaa tgaaaaaatc acaaatgcca ttaaaaaaca
     2581 agttgataag ctagagcatg tgatcttagc aggctttaca catgagccca tcatcaagct
     2641 ttctgcgaga ctttgtgaaa aagtggggca tgattttaat aaatgttttt atgcggataa
     2701 tggctcaagt gccattgaag tagcacttaa gatgagtttt cattatcatt taaataaggg
     2761 agtgaaaaaa agtaaatttt tatctttaag caattcttat catggtgaaa ccttaggagc
     2821 cttaagtgtg ggcgatgttg cactttataa agatacttac aaagccttgc ttttagagtg
     2881 tttaagcacg cctgtgccac aaggcaaaga ctacactaaa gagcttgaaa ttttaaaaga
     2941 tattttagaa aaaaatgcaa gtgaaatttg tgcttttata cttgaaccct tggtgcaatg
     3001 tgcaggaaat atgcatatgt atgaagcagg gtttattgat gaggccataa agctttgcca
     3061 taaatttgga gtgcaagtga tttttgatga aattgcagtg ggctttggac gcacaggaac
     3121 tttgtttgcc ttacatcaat gcaaacaaag ccccgatttt atctgccttt caaaagggat
     3181 aacgggtgga tttatgccac tttctgtagt gcttacaaga gatgaaattt ataatgcttt
     3241 ttatgatact tatgaaagcc aaaaggcttt tttacattct catagctata cgggaaatac
     3301 cttagcttgc gcggcagcaa atgcggtttt agatatcttt gaggatgaaa atattttagt
     3361 aaaaaatcaa attttaagcg agtttatcaa aaaagaattt tcaagacttg aaaaatttga
     3421 ctttttgggt aattttagaa cttgcgggat gatcagtgct tttgatattt taagcaccaa
     3481 gtataaacgc gtaggacttt ttgtatttca aaaagcctta gaaaaaggtt tgcttttaag
     3541 acctttagca aatacgattt attttatgcc tccttacatc atcacaaaag aacaaatcgt
     3601 ttatgtacta gagagtttag agcagatttt taaggaattt taagttgtaa aatttcttgc
     3661 atttgctctt taaaatcttt atttaaaatg ctattttcat caaaaaaatc aagattgatt
     3721 ataggaattt ttgcataatt ttttataaaa tcatcttgta agatatcttt tttacccatc
     3781 attacaaggg ctaaaagatt gatatttctt tgctttaaag cttcaatgct aagcaagata
     3841 tgattaatgc ttccaagata gtattttgct accaaaatcg tagggtgttt gaaaatattc
     3901 acaaaatcaa tcatagtgta attttcatcc ataggagaaa aaagcccacc cgcaagctca
     3961 ataagtaggt ttttgctttt tggtaaaatg atatctaagg ctttataatc aagcttttct
     4021 ttgatttttc caagatgagg agaagctgga gtttgcaaaa aaataccttc tttaaaaatc
     4081 tttgtttttg ggctaaattt tgcaataaac tcgctatctg ttggagttcc tgcttgaatg
     4141 agtttaaaat aatcatagtt aaaattcgca caaaaagctg cgctaaaatg tgtttttcct
     4201 acatcagtat gtattccact tacataaatt tgcacaaaaa atcctcaaga aagaaatttt
     4261 aaacccgctg tacaagtaat aatcacagcg attaaaaaaa gtttcaaaaa acttttactt
     4321 tctttataaa aaagcactcc tatcattacc ccaccagcgg ttccagctcc tgtccatata
     4381 gcataagcaa cgctcatagc gatattttgc atacttaagc ttaaaaaagt aaaagaaaat
     4441 ccaaaacaca ctatcaaagc taaaaggtaa agcttgtttt tagtgcttac aagttctttc
     4501 atgatcacca cgccaaaaat ttcacaggca gtagctaaaa acaaataaaa ccattccata
     4561 actaagcttc cttgcttacc catttaaggg ctataatgct taaaagtaaa atcgctataa
     4621 gcacaagttt aattatagaa acagcctcat taaaaataaa catttcattt aaaaccactc
     4681 ctatagtgcc aatgcctaca aaaacactat aagtaatgct tacttcaagt ctttcacaag
     4741 cttttaaaaa acaagtaaaa gaaatacaaa ccccaatggc tgttaaaata tagtgccaaa
     4801 tttctgtaga atacttaagt ccacttaccc aaaaacattc tataatcccg cctaagatta
     4861 ttaaaaacca agctatattg atattgaatt tttcattcac atgaagcctt aaattaacat
     4921 aatttataaa acaaattata tcttaaagaa attaaaagaa gctataaatt tacttttcca
     4981 taagccaaaa ttagatataa tcaaagctca ttttttaaga aaggacaaaa gatgttagaa
     5041 ggcatcgtta gagagagtat cggtagaaaa gctgctaaag ctttaaaaag agatggttat
     5101 ctaatcgcaa acatctatgg aaaaggatta gaaaacatca atgccgcttt taaagtaaat
     5161 gagtttatta aggaagttcg taaaaaaact actttaattt ttgatgtaaa agtaggttct
     5221 caaactttaa gcgttgtagt tgtagattat caaaaagatc ctgtaactgc agaacttaaa
     5281 catgtggatt taaaagttgc acaaaaaggt gtgatttcta aatacatggt tccagttaaa
     5341 atcacaggaa cagctatagg tcttaaaaat aaaggtgttt taatccaatc aaaaagaaga
     5401 ttaaaagtaa aatgtgcagc tgaaaattta ccaaatttct tcgaacttga tgtaagtaaa
     5461 cttgatgtgg gtgatgcttt acttgttcgt gatattgtag ttcctgcggg agtaactatg
     5521 attgatgctg atagagtagc ggttgtaggt gtagaaaaag ctagatgatt ttagtcgtag
     5581 ggcttggcaa tataggcgta gagtatgaaa atacccgtca taatgtcggt tttatgctaa
     5641 ttgacttact tttaaaagaa agcaatttta caaatcttac aaactctaaa tttaaaggag
     5701 agctttttaa aataggttct tctttacttc ttcttaaacc tagtacttat atgaataatt
     5761 caggacttag cgtaaaagca gtgaatgatt tttataaatg cgaaagaatg atagttatcc
     5821 atgatgatat agatataaat ttaggagcct tgcgctttaa aaaaggcggt tcaagtggtg
     5881 gacataatgg gcttaaaagc atagatactt tatgtggaaa tgactatgaa agagtgcgta
     5941 taggagtggg aaagggtgaa aatgtgattt cccatgtttt aggtaaattt aaatccgaag
     6001 aagaaataac tttaagcaaa gttttagagc atacaaaaaa agctttgctt gagcttattg
     6061 aaaatgatga tttgtctgct atatcatcca aatacagcct aaaggcttaa gatgtggata
     6121 ttttttcgtt ttatttcagg gatttattta aaaaattttt ttattatatt tttttcttta
     6181 cttggttttt attgcggtat tgatttactc ttaaatttta aagatctacc aaaagccgca
     6241 aatcttgatt tgctttatgt tatgttttta tctttttcgg cagtgcctta tgtattaccc
     6301 atttctttga tttttgcttt ggtagtttct ttgatttcta tgatcagagc aaatgaattt
     6361 gtaagtcttt atgcgttagg actgagtaga aattatgtta ttttatttcc ttttttatgg
     6421 gctttatttt tttgttgtat ttatatagga ttgaatttta cttcttttgc ttatgcaaat
     6481 gattataaga gaaatatttt aaaaaatggc actattatga atcaaagtgg agaagtgttt
     6541 ttgaaattta acaataattt tgtttatatt tcaaagataa acaatggaca aaatagtgct
     6601 caaaatataa aaatttttaa tattaatgat ttaaatttaa gctcttttgt aagtgctaaa
     6661 aatgcccatt ttgaaggtga aagctggatt ttgcgagatg gtaatattac attattacct
     6721 aaaaattatg aacttgctaa tgatggttta aagatacaag atttctccga gcttaaatca
     6781 cttgagggtt ttaaaccaaa gattatagaa ggggttgcta gtaatagtga ttattcaata
     6841 tctgatgcac ttgaaagttt tgagcttttt aaggcacaaa atgtcaatac agatactctt
     6901 aaaatcaatc tttataaatt tgtttttact cctttttttg caccattttt aatgcttgtt
     6961 atgtattatt tttttcctgt aatagcaaga ttttttaatc ttgctattgt aacttttgta
     7021 gcttttgtag tgactttgat gatttgggga gtcttgtttt tgcttactag attaagcgaa
     7081 aatagtgtga ttgcaagtga aattggcatt gtagtgccta ttataatttt gggttgttta
     7141 agtgcttata tgtattataa gcatcgataa attaagcttt gtgtagtaaa attataaaaa
     7201 ttaaaggtta aatatggatt ataaacaatt aaaacaagaa tttaataccc ctttttatat
     7261 ttacaatttt gatttcataa aagagcgttt tttaaatctc aaagaggctt ttaaggctag
     7321 aaaatctcaa attttttacg ctgtaaaagc caattcaaat ttaagtttgt tgcaaatgct
     7381 tgcaaattta gatagtggat ttgattgtgt gagtataggc gaggtaaagc gtgccttaaa
     7441 agcaggagca aaagcttata agattatttt tagtggagta ggaaaaacca aagaagagtt
     7501 aagacaagct ttagaatatg atattttata tattaacctt gaaagcgaag ctgaaatgat
     7561 gcttttagaa agtgtggcta aagaacttaa tctaaaggca agaatcagca ttcgtgttaa
     7621 tccaaatgtt gatgcaaaaa ctcatcctta tatttctaca ggattaaatg aaaataaatt
     7681 tggtgtcgaa attgatatag caagaaaaat gtatctttat gtaaaaaatt catctttttt
     7741 agagcccgtt ggagtgcatt ttcatatagg ttcgcaactt ttagatattt ctcccattca
     7801 tgaagcagca ggcatcgttg caaaacttgt aagagagtta aaagccttgc aaatcgatct
     7861 taaatttttt gatataggcg gtggtttggg tgtggcttat gaaaaagatg agtgtgaatc
     7921 tgatctttat gattatgcac aaggtatatt agcacaactt catgggcttg atttaactat
     7981 aggaatggag cctggaaggt atttagttgc taaaagtgga gaatttgttt gttcagtact
     8041 ttatgaaaaa caaaataaaa ccaagcgttt tgttgtagta gatggagcga tgaatgatct
     8101 tatacgccca agtttatacg aggcttatca tgaaataatc ttaccttata atcaagccca
     8161 agagagttta tgtgatgttg taggtggaat ttgtgagagt ggagactttt ttgctaaagc
     8221 aaggtctttg cctagcactc aaagtggtga tataatggtt attaaaaata ctggagctta
     8281 tggttttagc atgagcagta attacaatac tcgtaataaa gtttgcgaat tagcccttga
     8341 agaaggacag gtaagattga tccgtcaaag agaaaatttt gaagatcaaa tcgctttaga
     8401 agagaaattt ttaaaggctt aaaatgtttt ttttagatgt tcaagggact ttaatttctg
     8461 atcatgataa atctttaatc catggtgcta aagaactgat cgatttttta aatgcaaaaa
     8521 atcttcctta tcttatcatc actaacaata caaaaaaact tgatttttta gaaaaattac
     8581 agcaaaaagg attggctata aaagaaaatg cttatattga tcctttcagc gttttaaaac
     8641 accttttaag accttgtaaa gttgcggctt ttggtgcaga tgagtttgta aaaagtcttg
     8701 aaaatcttgg ttttgagctc gattttgtaa atcctagtgc tgtgcttgtg gctagttatg
     8761 atgattttaa atttaaagat tttgccacta tgatagaatt ggctagaaga gaagttagat
     8821 ttatagctat gcacgaaact agtatttata aaaaagatgg taggccttat cctggtgtag
     8881 gtagcattat ggctatgctt aaaaatgcta ttgattttga atacgaggtt gtgggtaagc
     8941 ctagcattgc tttttataaa gaagctttaa atttaataag aagacaaaat tcaaaaatcg
     9001 attttgaaga tattaaaatc attagtgatg attttagggg tgacttgctt aaggcaaaag
     9061 aacttggcat gaaaaccttg ctagttttaa gcggcaagat aagcgacaca aaagggcttg
     9121 atacggattt gcttgatgga gtttatccta gtgtttttga gtttttaaag gatctaaaat
     9181 gccaaattta gaagaattta gaaataaaat cgatgcggtt gatgataaaa ttttagatct
     9241 tttaaatgaa agaatgactt atgttaaaag tataggtgag cttaagcaaa gtagtggggg
     9301 aagtatttat cgtcctgagc gtgaaagagc cattatcaat cgtttaaaaa atgcaaattt
     9361 aggactttta gatcaaaatg ccatagaggc aatttatcaa gaaatttttg cagtttcaag
     9421 aaatttagaa atgcctcaaa ctatagctta tttagggcct gaaggaactt atacacatca
     9481 agcagcaaga agtcgttttg gtgcgatgag tcgttatata gccttggcca atatcgaaga
     9541 tgtttttaaa gagttaagca acaaagaagc aaaatacggt gttgtaccta tagaaaataa
     9601 taccgaaggt gcagtgggca ttactttaga ttgtctaggt aagtataatg agcttaaaat
     9661 ttttggcgaa atttatatgg atattcatca ttcttttgta ggaattaatg aaaatttaaa
     9721 agaaatcaaa cgcatttatt cgcatccgca aggttataat caatgtcgta aatttttaga
     9781 aagtcatgaa cttagtgcta tagaatttgt tccttcaaaa tctacagcta atgcagctta
     9841 cctagcttcg caagataaat atgcggcagc aatttgttct agaatagcgg ctaagcttta
     9901 taatgtgcct gtactttttg ataaaataga agataatgca gccaataaaa caagattttt
     9961 aattttaagc gatattaaaa atcctaaaat gccaaattgt aaaacttcta ttttagcaca
    10021 cacagcacat aaacctgggg ggcttagctt tttattagag cagtttaaaa aagaaaatat
    10081 caatcttact aagcttgaat ctcgccctgt aaaatcaaaa gaatttttac acagttttta
    10141 tatagatttt gaagggcata ttgatgatga aaatgtaaaa aaagccttaa aagatataca
    10201 agagattgtt tggcttggat cttatttatc aggagaaaaa gatgaaattt aatgaatttt
    10261 taaatcattt aagcaattat gaacctggaa aagatataga agttattgct aaagaatatg
    10321 gcgttaaaaa agtgataaaa ttagcaagca atgaaaatcc ttttggcacg ccaccaaaag
    10381 ctatagaatg tttaagacaa aatgcaaata aagcccatct ttaccctgat gatagtatga
    10441 tagaacttaa aagcacattg gctcaaaaat acaaagttca aaatgaaaat atcattatcg
    10501 gtgcaggtag tgatcaagtg attgaatttg ctatacatgc taagttaaat tctaaaaatg
    10561 cttttttgca agctggagtt acctttgcta tgtatgaaat ttatgccaaa caatgtggtg
    10621 caaagtgtta taaaactcaa agtattactc ataatttaga tgagtttaaa aaactttatg
    10681 aaacgcacaa agatgaaatt aaacttattt ttttatgctt accaaacaat cctttaggcg
    10741 agtgtttgga tgcaagtgag gcgaccgagt ttattaaagg tgtaaatgag gattgtttag
    10801 ttgtgattga tgcagcttat aatgaatttg caagttttaa agatagcaaa aaacatttaa
    10861 aaccttgcga attgattaaa gaatttgaca atgtacttta tttagggact ttttctaagc
    10921 tttatggatt aggaggttta cgcattggtt atggtatagc taatgctaat attattagtg
    10981 cattttacaa gcttcgtgcg ccttttaatg tgagtaatct tgctttaaaa gcagcagttg
    11041 cagcaataaa tgatgatgaa tttgctaaaa aaactttaga gaataatttt tctcaaatgg
    11101 aactttataa agaatttgct aaaaaacata atatcaaaat cattgatagt tatacaaatt
    11161 tcatcactta tttttttgat aaaaaaaata gtacagattt gtctgaaaaa ttgcttaaaa
    11221 agggtataat aataagaaat ttaaaaagct atggtttaaa tgctatacgc attactatag
    11281 gaacatctta tgaaaatgaa aaatttttta cagaatttga taagatttta agatagataa
    11341 atcaaataaa aatatgtaaa attcgctaaa ctaagggatg agaattaatg gattttaaaa
    11401 atatgcttca tcaaattggg caactttatc aaaatttaac tcgcaagcag cgtatagtga
    11461 ttgctgcatc tattgtagta gtggttgggt ttttggtttt tttagcttta tttcgtggaa
    11521 gtggtagtaa tgcaaataat ggatatgcag ttttagttga aaatgtaagc ccaagttctt
    11581 ctgctgcaat tgtagctaaa cttgaacaaa ataatattcc ctataaatta gaaagtgaaa
    11641 ataaaatttt agttccacaa gatcaggttt atcgtcaaag aatgtttatt gcaagcgaag
    11701 gtcttataaa agatagtcgc gtgggttttg aagcttttga tactcaagct tttggagcta
    11761 caaatgaaga gcaaaaggta aaataccaaa gagccataga aggcgaactt gcaagaacta
    11821 ttgagacttt agaacctatt cgtagcgctg ttgtacacat agcatttcct aaagatagtg
    11881 tttttaccga aaggcaaatt ccgcctacag cttcagttgt tgttaatgtt cgcgaaggct
    11941 taaagcttac tagaaaacaa attgatggta taaaaaatat tgtttcagcg gcagttccaa
    12001 aacttactaa agaaaatgtt aagattagtg atcaaagtgg tgtgccttta gatgagcaag
    12061 aagcatatga agatgacttg gttcgtgcgc aaattaaatt taaaagtgat caagaaaaag
    12121 ctttagaaga taagattata gaaaatttag ctccttttgc aggtggcatg gataaagtaa
    12181 aagtgagtgt aaatatagat tttgattttt ccaagcaaga atctcaaagt gaaatttatg
    12241 atccaaatcc tatagtgcgt agtgagcaaa ctttaaacga ggaaagaaca ggtagaaaag
    12301 atccagaaat tcagggtgtt ccaggtgctg tttctaatat aggtcctgtt gaaggacttg
    12361 acaataaggg tcaaattgac acttataaaa aaaatcaagt tactacaaat aatgaacttt
    12421 ctaaaactat cacaaatacc aaaaaacaat ttgcaacagt tttacgcact tcagcagctg
    12481 ttactataga tggaaaatat caagatgtgg ttgatgaaaa tggggatgtg aaaagcgaat
    12541 atgtcccatt gactaaagaa gagcttgcaa gtgttgagag tatagttaaa aatactatta
    12601 attttagcgc tactagaggt gatagtgttg tggtgcaaaa tttaccattt catcgtgagt
    12661 cgattagagt tgagagtaaa gttaaaactt tttacaatcg ttttgttgag ccatttattc
    12721 cgccggttaa atactttatt gcagcgattt tactttttat tttttacaaa aaagttattg
    12781 ctccatttac tcaaaaaatg cttgaagatg tcgcagcaca agaggaaatg cagcaaggtc
    12841 caaatgctgt tttagatgat gctgaagatg ctttagagaa atttaatgca gcaaggaaaa
    12901 aagttgaaga acaacttggt tttggggata acttcaatga agattctatc cagtatgagg
    12961 ttttgcttga aaaattgcgt ggtttggtaa gtgataaagg tgaggaaatt gcagcacttt
    13021 tgcaaaactt aattcaaaat gatagcgaat ttggcgaaaa ggatatgtga tgataaagct
    13081 aagtgaagaa caaaaaatgg tctatgatga tttatcgatg cctgagaagg tagcaatatt
    13141 tcttatacaa cttggcgaag atgcaacaac ttctgtgttt tcacatatgg aaattgatgt
    13201 aatcacagaa atttcacgtt atattgctat ggctaaaaat gttgatagat ctgtagctac
    13261 tgcagtttta gaagaatttt acactctgct tcaatcaaat caatatatta aaagtggtgg
    13321 tttggaatat gctaaagaaa tactttttcg tacttttgga ccagagattg caaataaaat
    13381 tcttgaaaaa ctcactaaaa gtatggagaa taatcaaaat tttgcttatt tggcgcaaat
    13441 taaaccacag caacttgcag actttattac caaagagcac ccacaaacca tcgctcttat
    13501 tttggcacac atggattcta ttcatgcggc agaaacttta gagtatttta gcgatgaatt
    13561 aagggctgag gtggttataa gaatggcaaa tcttggcgat atttctccaa gtattattaa
    13621 aagagtttct gcagtgctag aaagcaagct tgaaagtctt acctcttata aggttgaagt
    13681 gggcggccca agagcagtag cagaagtgct taatcgtttg ggtcaaaaag caagcaaatc
    13741 aaccattact tatattgaac aaagtgatga acgcttagca gagactatta aagagcttat
    13801 gtttactttc gatgatatac aaaaacttag cactcaggct ataagagaaa ttttaaaagt
    13861 agccgataag cgtgatttaa tgataggttt aaaaggtgca agtgaagagt taaagcaaaa
    13921 attcttagcc aatatgtcta cgcgtgcaag cgaagctttt cttgaagaaa tgggtttttt
    13981 gggtgctgtg cgtgttaaag atgttgaaga tgcacaaaga aaggttgttg aagtggtgca
    14041 aaaacttgca gaacaaggtc ttgttcaaac aggcgatgcg gatgaaatga tagagtaggt
    14101 gagagatggt taatcgtagc aatgtaattt ctggtggggc ttctgatcag catgttgttg
    14161 aaggatatcg ttttaaagtt atttcagaat ttgataatca tacaggtgaa aaaaaacata
    14221 ctcaaactcc agatgaagaa aatgctaata tatctttaaa tgacgaaaaa ccagtcgaag
    14281 aaaatcaagt cattgcctct acgcaagctg ttatggaaac tcaaattcca acatttcaac
    14341 caagctttgt tgaagatttg cttaaaaaaa cagatgaaat gtcaagcaat attattaaac
    14401 ttcaaatgca aatagaaagc caagagaatg aatttaataa ccgcttaaat tcagaacttg
    14461 aaaatgctaa agaaaaattt gccaaagaag gttatgagaa agcaaaagaa gaatttcaaa
    14521 aagaattgag tgattttaaa gataagtatt taaaaagtat agccaaactc gataatgctt
    14581 gcgaaaatct tgaaaatttc atagaaaaaa atgagaaaga attagcagat actgctatag
    14641 atatcgctaa agaagtaatc ttaaaagaac ttgaactaaa ttcaagtaag atagcttatg
    14701 ctttggctaa agatttaatc ggcgagctta agggtgctag tgcaattgag cttaaggtta
    14761 atgcagagga ttatgagtat ttaaaagagc aatttgatca gaatgctcac attaaaataa
    14821 gtcttgatga tgcaattagc aaaggaagtg ttgttattat aagtgacgca ggcaatatag
    14881 aatccaatct taactctcgt ctaactaaaa ttaaaaaaat ggtgaataat gagtaaaaaa
    14941 tttgcccata ctcaagaaga gttagaaaag ctaagtttaa aagaattaga aaatttagca
    15001 gcatctatgc gtgaaaaaat catacaagtt gtgagtaaaa atggtgggca tttaagttca
    15061 aatttgggtg ctgtagaact tagtatagca atgcatttgg tttttgatgc aaaaaaagat
    15121 ccttttattt ttgatgtgtc gcatcagtct tatacacaca agcttttaag cggaaaagaa
    15181 gaaatatttg atactttaag acaaatcaat ggtttaagtg gttatacaaa acctagcgag
    15241 ggagattatt ttgtagcagg gcattctagc acctctattt ctttggcagt aggtgcttgt
    15301 aaggctattg ctttaaaggg tgaaaagcgt attcctgttg ctttgattgg agatggtgct
    15361 ttaagtgcgg gtatggccta tgaggcttta aatgaattgg gtgattctaa atttccttgc
    15421 gtaatacttt taaatgataa tgaaatgagt atttcaaaac caattggagc aatttcaaag
    15481 tatctttctc aggctatggc aacgcagttt tatcaaagtt ttaaaaagcg tattgctaaa
    15541 atgttggata tattacctga tagtgctact tatatggcta agcgttttga agagagtttt
    15601 aaacttatta ctcctgggct tttgtttgaa gaattagggc ttgaatatat agggcctatt
    15661 gatggacata atttaggtga aattatttct gcattaaaac aagcaaaagc tatgcaaaag
    15721 ccttgtgtga tacatgctca aaccataaag ggtaaaggct atgctttagc cgaaggaaaa
    15781 catgctaaat ggcacggggt gggagctttt gatatagata gtggagagag tgttaaaaaa
    15841 agtgatacta aaaaatctgc tactgaaatt ttttctaaga atttgcttga tttagcctca
    15901 aaatatgaaa atattgttgg ggttacggca gctatgccaa gtggaacagg tcttgataag
    15961 cttatagaaa aatatccaaa tcgtttttgg gatgtggcta ttgcagaaca gcatgcagta
    16021 acttctatgg ccgctatggc aaaagaagga tttaaacctt ttattgcaat atatagcact
    16081 tttttgcagc gtgcttatga tcaagtgatc catgattgtg cgattatgaa tttaaatgtg
    16141 gtttttgcta tggatagggc agggatagta ggcgaagatg gggagacgca tcaaggtgtt
    16201 tttgatctta gttttttagc tcctttgcca aatttcactc ttttagcccc aagagatgaa
    16261 caaatgatgc aaaatataat ggagtatgct tatttacatc aaggacctat tgcttttcgt
    16321 tatcctagag ggagttttat tttggataaa gaatttaatt cttgtgagat aaaacttggt
    16381 aaggcgcaat ggcttgtaaa aaatagtagt gaaattgctt ttttaggtta tggacaaggt
    16441 gtggcaaaag cgtggcaagt tttaagagcc ttgcaagaaa tgaataataa tgctaatttg
    16501 attgatttaa tttttgctaa acctttagat gaagagcttt tgtgtgagct tgctaaaaaa
    16561 agtaaaattt ggtttatttt tagtgaaaat gttaaaattg gcggtataga aagtttaatt
    16621 aataattttt tacaaaaata tgatttgcat gtaaaagttg ttagctttga atatgaagac
    16681 aaatttattg aacatggaaa aacaagtgag gtggaaaaaa atctagaaaa agatgtcaat
    16741 agtttgttga cgaaagtttt aaaattttat cattaaataa taaaaaatat tatttaatat
    16801 aaacttcttt taataaaaat tttattatta tttttactta aaaaagtaag gaataaataa
    16861 aatggaatta ctacaaatgc ttaaaaaaca tgagttaaaa gctactccgc aaagactatg
    16921 tgttttaaaa attttaaaaa gacatgagca tcctaatatt gatgaattat atacagaaat
    16981 taaaaaagaa tacccttcaa tctctttagc gacggtttat aaaaatctta atactttaca
    17041 agaacaaggt ttagttgttg aaatcaatgt tttaaatcaa aaaacttgtt acgatatcta
    17101 tgaagaagaa catattcatg ttgtttgcgc caaatgtggt ggtatagagg atttaagttt
    17161 taaagatgct aagctttatg aatatcaaga gcatttagaa aaaaagatag gcaatctcgt
    17221 caatcatctg tctgtttgtg cttatgttga tagttgcaaa aagtgtcatt aagcaaaata
    17281 aggttaaaat aacccatata ttttaagggt tattttaatg gtttatgaaa ttcaaaaaaa
    17341 ctttttacta tctgattgca ctcttttaga gaatttaaaa aaagataata taccttttcg
    17401 aaattctaaa tttgaaactt tttatactca aataacttca aatcatagtg ttaaatttca
    17461 aagtttttgc aatgaatttt ataaaattac aaaatttaat aattcaattt tagaacagaa
    17521 tcaagaagag aaaatttcta aaaaaaaatt tgaaaaagct cgaaaaaaga ttataggaaa
    17581 gagtattaaa aaagaacgct tcgaatttaa attttgctct ttaaaaagtt atattgatat
    17641 ttatgaagag cctaaaattt gtattttaaa aatatttttt ccaactttgg atagttccaa
    17701 tgaatttaaa attcctaaag attttaaaat tcaaaaagaa ttacatcatg atttaaattc
    17761 taaacatatc gttttatatg gttttgaata tcaaaatttt gatatagaga aatattttaa
    17821 aattatagaa aaaaatcaga att
//
LOCUS       DARATF010000031        17075 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.031, whole genome shotgun sequence.
ACCESSION   DARATF010000031 DARATF010000000
VERSION     DARATF010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17075
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.031"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            99..656
                     /locus_tag="SB502_000803"
     CDS             99..656
                     /locus_tag="SB502_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0434265.1"
                     /translation="MKIKKILLLVAISCLFVACSNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKVTLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            656..1522
                     /gene="ftsY"
                     /locus_tag="SB502_000804"
     CDS             656..1522
                     /gene="ftsY"
                     /locus_tag="SB502_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEG0434266.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            1522..2862
                     /gene="radA"
                     /locus_tag="SB502_000805"
     CDS             1522..2862
                     /gene="radA"
                     /locus_tag="SB502_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEG0434267.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            2931..3611
                     /locus_tag="SB502_000806"
     CDS             2931..3611
                     /locus_tag="SB502_000806"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEG0434268.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            3608..3799
                     /locus_tag="SB502_000807"
     CDS             3608..3799
                     /locus_tag="SB502_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434269.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(3821..4669)
                     /gene="metF"
                     /locus_tag="SB502_000808"
     CDS             complement(3821..4669)
                     /gene="metF"
                     /locus_tag="SB502_000808"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEG0434270.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAGGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLKKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALADIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNTLALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHA"
     gene            complement(4679..6943)
                     /gene="metE"
                     /locus_tag="SB502_000809"
     CDS             complement(4679..6943)
                     /gene="metE"
                     /locus_tag="SB502_000809"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEG0434271.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALVQ
                     QYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYTQNIILNTSCSLLHVPYSTE
                     FESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIRF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATQKIREQL"
     gene            complement(6955..7725)
                     /locus_tag="SB502_000810"
     CDS             complement(6955..7725)
                     /locus_tag="SB502_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0434272.1"
                     /translation="MTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFHPKEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSNEVKKFIEEKYQGALIPTF"
     gene            complement(7736..8728)
                     /locus_tag="SB502_000811"
     CDS             complement(7736..8728)
                     /locus_tag="SB502_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HEG0434273.1"
                     /translation="MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLN
                     EKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEGFEYTAGSKDYREQLDIGTERDA
                     LNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKAFAQALDLPNNA
                     FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGFEAFIDGKWL
                     SIPPLENSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFK
                     LNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYHSDLIEKFSFA"
     gene            complement(9040..9534)
                     /gene="luxS"
                     /locus_tag="SB502_000812"
     CDS             complement(9040..9534)
                     /gene="luxS"
                     /locus_tag="SB502_000812"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEG0434274.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSIAK
                     AWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIINNKELK
                     LENA"
     gene            9649..11067
                     /gene="gatB"
                     /locus_tag="SB502_000813"
     CDS             9649..11067
                     /gene="gatB"
                     /locus_tag="SB502_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEG0434275.1"
                     /translation="MFEVVIGLEVHAQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHESNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKVRFIDKLGIKESDAEVLISSLEMSRFFESLISQNL
                     NPKLCVNWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            11064..11960
                     /locus_tag="SB502_000814"
     CDS             11064..11960
                     /locus_tag="SB502_000814"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEG0434276.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILVELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQSLLKQND"
     gene            11970..13148
                     /locus_tag="SB502_000815"
     CDS             11970..13148
                     /locus_tag="SB502_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEG0434277.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCRFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILEK
                     "
     gene            complement(13156..14682)
                     /locus_tag="SB502_000816"
     CDS             complement(13156..14682)
                     /locus_tag="SB502_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEG0434278.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMVKWSEILRIAISWVASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVVTFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            14824..15630
                     /locus_tag="SB502_000817"
     CDS             14824..15630
                     /locus_tag="SB502_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HEG0434279.1"
                     /translation="MRGIFYIIALFSLLNGDELTEALAKNNNQNSWEHFDYKNTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENAQVKNLSSLYEGENNSLL
                     FQKELFVAQNNYNYSGGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKKLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            complement(15627..17003)
                     /locus_tag="SB502_000818"
     CDS             complement(15627..17003)
                     /locus_tag="SB502_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEG0434280.1"
                     /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIITGIVLGYTDKEL
                     AIASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANVMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTIQVLVIAIITALIISLMRIEDKQAIQRVFEVVQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVAAIGVLLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
BASE COUNT         5707 a         2462 c         2930 g         5976 t
ORIGIN      
        1 aatctgtttt ttccattaat atgcctttaa aaaaatatta tcttatgtat gttataattt
       61 tagcattttt ataaagaata ataaaggatt gataaataat gaagattaaa aaaatacttt
      121 tactagtggc aatatcttgt ttgtttgttg cttgtagcaa tgataaagaa aagcagcaaa
      181 atgatgtaaa tttaagcacc gaggcaagta taaatcaaag tgatgatatg aattttaaac
      241 ttaatttgat tgatggagga tcaatttcag ttaaaaaaga aaatgccgtt ttaaatttca
      301 acgatgaaga taaggtaact ttgtttgtat tttttaccac ttggtgtacc ccttgcattg
      361 ctgaaatccc tcatcttaat aaattacaag aaaagtataa taatgatttt aatatagttg
      421 gggttttatt agaagataaa tctaacgatg agattcaaaa atttatagaa cagcataaaa
      481 tatcttataa agtcgctaat ggtgaaaata actatctttt agctaaagct ttaggtgggg
      541 taaatggaat tcctaccatg tttctttaca acaagcattc taaattgatt aatcagtatt
      601 tagggcttat tcctgaagaa atgctagaaa ttgatataca aaaggctata ctttaatgtt
      661 taattttttt aaaaaaggac ttgcaaaaac tcttgaaaat attgttggag ttaaaggaga
      721 gaataaaaag ataaccaaag atttgcttga agaaattttg cttgaagcag atgtaagtta
      781 tgaaatagtt gaagagataa tttattattt accacctcaa aatgaagtaa aaaaagaaga
      841 tttaaagcgt gttatgggtt cttattttct ttatgaaaaa aaagaaacca atcaagaaaa
      901 accttttgta gagcttattt taggagtaaa tggagcagga aaaacaacaa gtattgccaa
      961 gcttgcttat ttatacaaaa accaaaatca aaaagtgatt ttaggagcgt gtgatacttt
     1021 tagagcaggt gcgattgagc aattaaaact ttgggcgcaa aaagtggatg tagatatagt
     1081 tttaactgca caagggcatg atccttcagc ggttgctttt gataccattt ctaaagcaaa
     1141 agcaaaggat tttgatagag ttattatcga tacagcaggg cgtttgcaaa atcaaaaaaa
     1201 tttagctcat gagcttgaaa aaattgtaag aatttcaaac aaagctttag aaggcgcacc
     1261 ccatagaaaa attttagttt tagatggaac acagggaaat gctggaattt tacaagctaa
     1321 agcttttaat gagcttgtaa aacttgatgg tgtgattatc acaaagcttg atgggacagc
     1381 taaagggggt gcacttttta gtatagcaag agagcttgag cttcctattt tttatgtagg
     1441 cgtgggtgag caaatgacgg atttacaaga atttaatgca agtgcttatt tagatacttt
     1501 attagatcct atttttgaat aatggcaaaa aataaagcac tttttgaatg tcaagcttgt
     1561 ggaaatcaac aaagcaaatg gcttggaaaa tgtcctgatt gtggagcttg ggatagtttt
     1621 gtagaattaa aagctgagca aattaaagtt ttaaaagagc ttgcgcaagt tagcatgaaa
     1681 acaagtgagg ctgtttgtat tgaagatgtg gagttagagc attttacaag atacagcaca
     1741 gatgataatg agcttgattt ggttttaggc ggagggcttg ttgaaggttc tttagtgctt
     1801 ataggcggaa gtccaggtgt gggaaaatct acgcttttgt taaaaattgc ttcaaattta
     1861 gctaaacagg gtaaaaaagt gctttatgtc agtggcgaag aaagtaaagc ccagattaaa
     1921 ttaagagctg atcgtcttga ggctaatact ccgaatttat ttttacttac tgaactttgc
     1981 cttgaaaata ttttagaaga attgcacaaa aaagattata gcattcttat cgttgattct
     2041 atacaaactc tatattcaaa taaaatcact tcagcagcag gaagcatcac tcaggtgcgt
     2101 gagattactt ttgagcttat gcgtgtgagt aaggcttata atatcagtac ttttatcata
     2161 gggcacatta ctaaagaagg tgctatagca ggacctagag ttcttgagca tatggtagat
     2221 gtggtgcttt attttgaggg agatgccact aaagaaatca gacttttaag aggctttaaa
     2281 aatcgttttg gtggaacgaa tgaagtaggt atttttgaga tgactgctaa gggtttgatc
     2341 agtgcaaaag atttggcaaa tcgttttttt actcgtggaa aggctatttc aggaagtgct
     2401 ttaggtgttg taatggaggg atctcgtgct ttggttttag aagttcaagc tttggtgtgt
     2461 gaaagttctt atccaaaacg cagcgctacg ggctatgaaa aaaatcgctt agatatgctt
     2521 ttggctttgc ttgaaagaaa gcttgaaatt cctttggggc attatgatgt atttgtaaat
     2581 attagtggcg gagtaaaagt aagcgaaact gcggcggatt tggctgtggt tgcagctatt
     2641 atttcaagtt ttaaaaatcg ccctttgagc aaagatagta tttttatagg ggagcttagt
     2701 ttaaatggag aaattagaga ggtttttagc cttgatacgc gtttaaaaga agctaaaatg
     2761 caaaaattta aaaatgccat tgttccttct aagcctttgg aagatatagg gcttaagtgt
     2821 tttgttgcta aagaactttc gcaagtttta gaatggatgt aaattttcat taaaatataa
     2881 gtaagatttt gctaaaattt cgagtttaga ataaaatttt tgaggaaacc atgaaagatt
     2941 tatttttatt tagctctttg cttgatgcaa gtcatacttt ttcttatttt tttcacatag
     3001 gtttggtagc tttaattgct gttatagtgg ctatgatggc tactcgttct atgcaacttg
     3061 ttccacgcgg tatgcaaaat ttaggtgagg cttttttaga gggagtttta tctatgggta
     3121 gagataccat gggaagtgaa aaaggtgcaa gaaaatatct tcctttggtt gcaactttgg
     3181 ggattatagt gttttttagt aatattatag gtataatacc tggttttcac gctccaactg
     3241 caagtttaaa tttgactttg tccttggcta ttatagtttt tgtatattat cattttgagg
     3301 gtattagggc acaaggtttt gtaaagtatt ttgctcattt catgggacct attaaacttt
     3361 tagctccttt gatgtttcct atagagatag tctctcatct ttctcgtgtg gtttctttgt
     3421 ccttccgttt gtttggaaat attaaaggcg acgatttatt tttaatggta attttagctt
     3481 tagttcctta tatagctcca cttcctgctt atgtgctttt aacttttatg gcatttttac
     3541 aagcttttat ttttatgatt ttaacttatg tatatttagc gggtgcaact gttgttgagg
     3601 aaggtcattg atctatattt tagaattttt caaaggtgca tctttagctt taatgctttt
     3661 tggtgcactt ttcttctttt ttaaatataa ttcttttttc tatctttgct tgggtattat
     3721 accaggtttg cttttatctt taatttttgt tttacttata gaaaaccata agctaaaaaa
     3781 tgaaaataag ttaagataaa agcaaaaaat agtttatttt ctaagcatga agctcttctt
     3841 taagcaaatg ctttacagct tcataaattt taatagccgc tttggattta ttcatagtat
     3901 aaagatgaat tccatctaca ccacttgtga ttaaatcgac aatttgatcg caagcatacg
     3961 cgatacctgc atcttctaaa gccaaagtat tattttcata tttttctaaa attttaacaa
     4021 atttaggagg gattttagct ccgcaaagtt gagaaatttt taaaacctgt cttttgttag
     4081 taataggcat aatacctgcg taaataggta tgtcaatatc tgctaaagca caattttgtt
     4141 taaaagtata aaaatcttca ttatcgtaaa aaagttgagt aatgagctta tctgttcctg
     4201 catttacctt agttttaaga tggtgtatat cctcgatgaa atttttagat tcattatgtt
     4261 tttcgggata gcatgcggca taaatttcaa agtattcttg tttttttata aaagaaatta
     4321 aatcactagc ataagaaaaa tctttgcttt tttttaaatt ttcacatata tcgcctctta
     4381 gggcaagaat ttgattaaga tttttttctt tgcatttttg aagtatctga gtgatttttt
     4441 ctttactaga atggatgcaa ggtaaatgta ctatgctagg aatttgatat tcttcctgga
     4501 ttaagcttgc aacttctaaa gtattttgtg agttaataga gcctccagct ccaaaggtta
     4561 cgctgataaa attagggctt aattgcccta aatcatctaa gatagcatga agatttttga
     4621 tattttcatc ctttcttggt ggaaaaactt caaaagaaaa actacacatg aaaactcctt
     4681 ataattgttc tcgtattttt tgcgtggccg taactaaatt tttaagagag gctataactt
     4741 cttcataggc tcttgtttta agtccgcagt ctggattgat ccaaatttgc tccttaggta
     4801 atttgtttaa aattttttct atagttaaac ttaattcttc tacgcttgga actctagggc
     4861 tatgtatatc ataaactcct ggtcccacct cagttttaaa acgaatagct tttagggtat
     4921 ctaaaagact taagtttgat cttgaagctt caaaagaaat cacatcagca tccatagcgt
     4981 caatttcttt taagatatca ctaaattcac tataacacat atgagtgtga atttgagttt
     5041 tagcttttac cccgctatgc acaagattaa aagcaggaat agcccaatct aaatactcac
     5101 tatgccaatc actttttctt aaaggcagtt tttcacgcaa agccgcttca tcaatttgta
     5161 tgatttttat acctgcattt tcaagatcta acacttcatc tcttatagct aaggcaattt
     5221 gctcagtgct ttcttttaga ctgatgtctt ctcttggaaa ggaccaatta agtatggtta
     5281 caggtccagt tagcatacct tttacgattt tttgacttaa actttgtgca aatttagacc
     5341 aagctaaggt gataggcttt gtgcgtgata catcacccca aatcacagga ggtttaacgc
     5401 accttgtgcc atagctttgc acccaaccat tttgagtaaa taaaaagccc tttagattct
     5461 ctccaaaata ctccaccata tcatttcttt caaattctcc atgcactaaa acatcaagtc
     5521 ctatttcttc ttgaatttgt atgcattctt tgattttttg ttggttaaat tcagtgtagt
     5581 tttgagctga aattttttct tgcttaaagg caaggcgatt agatcttaca tcggcacttt
     5641 gaggaaagga acctatggtt gtggttggta aaagagggag ttttaaaaat tctttttgga
     5701 ttaaggcgcg ttctttaaaa ctaggcgttc tggtaaaatc ttcttttttt aaggccttaa
     5761 gccttgcttt gactttttca tctaaacgct ctgggatatt tttaaaaagc tcttgattgg
     5821 ctctaaagag cggattttct tcgctagaat ttagaatttc ttttaaatct ttaagttctt
     5881 gaagtttttc tttagcaaag gcaaaaagtt taagatagct tgaatctaat ttgctttcaa
     5941 attcagtgct ataaggcaca tgtaaaagtg agcaagaagt gtttaagatg atattttgtg
     6001 tatatttttg aagctcttta ataagcttta ggcttttagc ataatcatta gcatagatat
     6061 ttttgccgtt aataagacct gcaaaaagga ttttatcttt agcaaaaccg tattgttgga
     6121 ctaaggctaa gctttgtttt ccctcgataa aatcaagccc caaagcatca aatttgcttt
     6181 ctaaaagttt aggataaata tctcttaagt ctccaaaata gctttgaagt aaaattttaa
     6241 gatctttttt gtgatttaaa agttcttggt aaaattcttc gaacaaagcg atatcttcct
     6301 tgcttaaatc ataaaccaaa taaggctcat caagttcaag ccatgttact ttaagttcat
     6361 ttagtttatc aaaaagctct atgtaagcgt ttaaaagctt ttctttggcg agtttttgag
     6421 ttttttcatc tttaaaggca atgagtttaa aaagtgtgaa aatgcctatt aaaacaggct
     6481 tgctttctat accaagctct ttagcttcga gatattcttt aaaaatttta tcccctgtta
     6541 aagctataat atcagcatta tcgcactcag gcaccaaata atggtaattt gtattgaacc
     6601 attttttcat tgctaaggct gtaacatctc cattttctcc ttgataacct cgactttgag
     6661 caaagtattc atctaaagca tctaaattta aatttttata ctttgtatga acaatgttaa
     6721 aaagcacagc tgcatctaag acattatcat aaagtgaaaa atcattacta gggataaaat
     6781 caatgccagc tttttgaatt tcttgccagt gtctaatcct taaatcctta gcactcttta
     6841 aaagctcctc tttagaactt tggtttttaa agtatttttc aatagcaaat tttaattctc
     6901 tatttgcacc tattcttggg taagaaatga ttgaattttt catatttgtt ctccttaaaa
     6961 tgtagggatt aaagcaccct gatatttttc ttctataaat tttttaactt cattgctttg
     7021 caaggccttt actagggctt tgattttagg aaggttttca ttaccttctt taacggcgat
     7081 gatattgcca tattcactat atttactttc tgtataaagc ccatctttta cagggtttaa
     7141 acctgctaaa atagcaaaat tgctattaat aagagaataa tctacatcat ctaaactcct
     7201 tgtaagttga gcgtctttta actctacaaa tttaagcttc ttaggatttt tagtgatatc
     7261 taaaggagtg atgagctcat tatccttaac ttctataagt cctttgcttg ctacaatgcg
     7321 taaagcacgg ctttcatttg taggattatt gggtatagaa atgctttgtc cttccttggg
     7381 gtgaaattct ttgtgttttt tagaatacac tgccataggt tctatatgga tactggcaac
     7441 ttttacaaga tgggtgcctt gtctttgatt gaattctttt aaataaggct catgctgaaa
     7501 ataattagca tctaactcac cattttcaac cattacatta gggattactc catcattgaa
     7561 ttcataaatt tttaaatcat aaccttgttt ttgaagtgct gattttataa atcttaaaat
     7621 atctgcatga ggtgttatag aagagccaac tttaagttct tcatttgccc atgcaaaacc
     7681 ggtaaaaaga gtagcgacgc aaaaagcttt agtaaataaa gtcatttttt ctcctttacg
     7741 caaaactaaa tttttctatc aagtcactat gataaatact tgccacatca ggatgagagc
     7801 gtatcattct tttaaaataa ttacttgcaa catttcttaa aagtggattt ttaggatcag
     7861 tatccacacc tttactttct ttagcaagct ctggatttaa cttaaaaata ggtatatcct
     7921 tatcaagctg cactccaaga aaataagcta tgctaaagcg ttcttttggg cttaaattca
     7981 cgcggtgaat agtagctttt aaatagccat tggtagctag ttctaaaaat tctcctatat
     8041 taactacaac gctattttca agtgggggta tactaagcca tttaccatct ataaaagctt
     8101 caaatccgct ttgtttttct tgaaaaacaa aagtgataag cccaccatct ttatgtgaac
     8161 ctacgccttg agtgatattt tttgagcttt ttggataatg tatgatttta caatgttcgt
     8221 aagaattttc tccataaagt ttatcaaaag cattgttagg tagatcaaga gcttgagcga
     8281 aggcttttaa aagctttaaa caagcttttt tggtttgttt gtgccaagtt aagaaagttt
     8341 ttttaagttc tggaatttca ctaggccaaa gattaggacc ttctagtctt tgccataagg
     8401 gtgagtttaa attccagttt aaagcatctc tttctgtgcc tatatccagt tgttctctat
     8461 aatccttaga tcctgctgtg tattcaaaac cttcgctagt ataacctcta aattgaggag
     8521 aatgtaccat agaaataagc tctttcgaac ttctagaaag attaaaaaat tctttgccaa
     8581 gtttgaataa tttctcgttt aaatttttat ctatactggt attgataaga taaaaaaaac
     8641 ctattttaga agcaatttct cttaaatttt taagaaaagt gcttttatct ttttcataag
     8701 cttgtaaatc aagtataggt aagttcattt ttgctcctta aattaaaatt aaggataaga
     8761 agatattttg aattaaaatt ttattagaga aatttttgta agttaagatt ttaaatgagt
     8821 attttgaaaa aataaacttt tttgactttc ttacacatta tatctcctta tccacttttt
     8881 ggacctttgg aaacataatg ttaagccaaa ggacgcacta gatactacac atctcgcaca
     8941 tcagtttcat tttttctcct tttaaaataa taaaatttca aaatcatata taaaaatata
     9001 ttaattaaag cttaatcatt taaaaaataa agattctttt taagcattct cgagttttaa
     9061 ttctttgtta tttattatgc taatacctag atttaaaact ttttgggcaa tttgtttggc
     9121 ttcatctaaa gaatgcattg cgcaagttcc gcattggtag atattaagtt caggaatttt
     9181 gctttgatcg cttacgctta aaacatcttt catggctgct tcccaagctt ttgcaatact
     9241 tttctcatca ggtgttccaa ttaaactcat ataaaaaccc gtgcgacaac ccataggtga
     9301 aatatcaata atttcaactg aatttgaatt aagatgatct ctcataaatc ctgcgaataa
     9361 atgttctaag gtatgagtac ctttttcgct cataatgtct ttatttggta tgcaaaaacg
     9421 caaatcaaat acgctaatat catcaccctt aggtgttttc ataactttag ctaaacgcac
     9481 agcaggagct ggcattttag tatggtcaac tttaaagctg tctaataatg gcattttaac
     9541 tccttaaata taaattgtct aagaattata gcatttaaag ttaatattta aagcctttct
     9601 aaaagaaaaa aagataaaat aaaacattta aaaattcaag gaaattttat gtttgaagta
     9661 gttataggtc ttgaagttca tgctcagtta aatacaaaaa caaaaatctt ttgctcatgt
     9721 gcaacttctt ttggagaagc tccaaatacc aatgtttgtc ccacttgttt ggccttacca
     9781 ggagctttgc ctgttttaaa tgaagaggct gtaaaaaaag ctatagcttt tggaaaagct
     9841 gtcaatgcaa caattaataa aaaaagtgtt tttaatcgta agaattattt ttatccagat
     9901 ttacctaagg cttatcaaat ttcacaattt gatatcccta tagtagaaaa gggtgagctt
     9961 tttatcaatg taaagggtga aaataaacgc ataggtatta caagagcgca cttggaagaa
    10021 gatgcaggta aaaatatcca tgaaagtaat ttttctaaag tagatttaaa tcgtgcagga
    10081 actcctttgc ttgagattgt cagtgagcct gagcttagaa gtagcgatga ggcagtagct
    10141 tatcttaaaa aacttcattc tattatacgc tttttagaca tttcagatgc aaatatgcaa
    10201 gaaggaagtt ttagatgcga tgcaaatgtt agtataagac ctaagggcga tacaaaactt
    10261 tatactagag tagagattaa aaatcttaat tcttttcgtt ttatccaaaa agctatagaa
    10321 tatgaggtaa aaagacaaag tgaggcttgg gaagatggaa cttacgaaca agaagtagtt
    10381 caagaaacta gactttttga tacgacaaat ttagttacaa gaagtatgcg tggcaaagaa
    10441 gaagcggcag aatatcgcta ttttcctgat cctgatttat tgcctgtttt attaaaagat
    10501 gagtttttgg atattaaaat ccctgagctt cctgatgaga agaaagtacg ctttatagac
    10561 aagcttggta taaaagaaag tgatgcagag gttttaatca gttctttaga aatgagtcgt
    10621 ttttttgaaa gtcttatttc tcaaaattta aatcctaaac tttgcgtaaa ttggttaaat
    10681 actgaactta tgggactttt aaaaggagaa ttgactatag aaaattctcc tgtagatgct
    10741 caaaagcttg gagttttaat taaacgtata gaagatggca ctatcagtgc aaaagcggct
    10801 aaagatgtct tagcttttgt atttgaaaat actagcgtgg aaattgatga agctatagaa
    10861 aagctaggac ttaagcaagt aagtgatgat tcagccatag aagcggtgat tgaacaaatt
    10921 ttaaatgcaa atgccgataa ggttgcagag tataaaagtg gtaaagacaa gctttttgga
    10981 ttttttgtgg gtcaaacaat gaaagaaggc aaaggagctt ttaatcctgc aaaagtaaat
    11041 gaaattttaa aaacaaagct tggttgatgc gtatagcggt tattggtgcg ggaaaatggg
    11101 gcagtgcttt acatctagcc ttaaaagaaa atcacaattg ttttatcagt tctttgcatc
    11161 agcgtgattt agaagatttt gttagcataa aagaagcttt agaatgtgaa tatcttgttt
    11221 ttgctttaag ttctcaaggg atgcgtgctt ggcttaaaga aaatttcatc aacaaggggc
    11281 aaaaaatttt aattgcttca aaaggtatag aagatcaaag ttgtcaattt ttagatgaaa
    11341 tttttttaga ttttgtacca aaagaaaatt tttgtgtttt aagcggtcct tcttttgctg
    11401 ctgaagtaat gcaaaaactt cctactgctt tgatgattag cgggataaat caagagcttt
    11461 gtaaaaaatt tgcaagtttt ttccctgatt ttattaaaac ttatattgat aatgatgttc
    11521 gtggtgctga aatttgtggt gcttataaga atgttttagc aattgcaagt gggattagtg
    11581 atgggttaaa acttggcaat aatgcaagag cggcactgat ttcaagaggg cttatagaaa
    11641 tgcatcgttt tggtaaattt tttggtgcta aagaagaaac ttttttaggg ttaagtgggg
    11701 caggggattt gtttttaact gcaacgagtg ttttatcaag aaattataga gtaggtttaa
    11761 aactggcgca aaatcaaaaa ttagatagta ttttagtcga acttaatgaa gtagcagaag
    11821 gtgtaaaaac tgcttatgct atagaaaaac tagcaaaaat gaaaggaatt tatacaccta
    11881 ttgtaaatga agtagtggca atttttaagg gtaaaagcgt gcaagaagca acgcagagtt
    11941 tattaaagca aaatgattaa ggaaaaatca tgataattaa aaatgcaaaa atttatggag
    12001 attctttaca agatatagag attaaagaag gaaaaattac caatattggt tctaatttac
    12061 aaggcgaaga aattttagat gctaaaggta tgactttact tccatctttt gtggatttgt
    12121 gtgtgagttt aaaaaacgat aaattttctt tagctaattt agagctttta gaaaatgagt
    12181 gtctaaaagg aggaatttct agtatagttt tgcgtgattg catggatttt gatgaagaaa
    12241 gttttgcttt atttttacaa aatttagctc aaagaaagat gcaaattttt tcaagtgtgc
    12301 gggttaagga tgcaaacggc aagcttaaaa atttagccac tcttttaaat aaaggtgctt
    12361 gtgctctaga acttgacagc tctttagatg caaatacttt aaaagtaagt tcacaatatg
    12421 cttttatgaa agactctcca atttttgtgc gttgttatga taaggatttt gatgataatg
    12481 gagtgatgaa tgattgtgaa atgagttttg agctagggct tataggcatg agtaaaatcg
    12541 ctgaaactag ccagatagct aaaatgaaag aattggctaa attttataaa aataaagtta
    12601 tttttgatct tttaagtttg aaagattctt tagtattatt agatgaaaag gatttaaaac
    12661 ttgtaagcat tcatcatctt atcaaagatg atagtgcttg tgaagatttt aatacggctg
    12721 cgaaacttat gccaccttta agaagcaaag aagatgtttt ggctttaaga gaggctttaa
    12781 aagaaggaaa gattagcttt ttaacttccc tgcatagtgc aaaatcaatt tctttaaaag
    12841 atttagcttt tgatgaagcg gcttttggaa ttcatagcgt atgcgaattt ataagtcttt
    12901 gttatacttt tttaatcaaa gaaggatttt taaattggca agagctttgt cgatttacaa
    12961 gtaaaaatcc tagtgaattt ttaggtttaa atagtggagt tatagaagtt ggcaaagaag
    13021 ctaatctagt tctttttgat gagaatgaag aaatttttgc tccaaaaagt tctctttatt
    13081 ctgaggataa actttttgga aagattaaaa tgcatataat taaaggaaaa aatattttag
    13141 aaaaataagc tttacttaaa ttcctaaaga tagtttaaat cctaaaaata caagtgctgc
    13201 cataatacca gcggctggta aagtgataat ccaagccaat cctataggct tcatcataat
    13261 ccaatttgcg tttttattat acactcctat acccaatata gcacctatga gtatatgggt
    13321 ggagctaaca ggaattccaa attgtgtagc taagagtata actatgcttg caccaagttc
    13381 tgcagaaaat ccagtagtag ggcgtatggt tgcaagtttt gaacccactg tagtaatcac
    13441 ttctttacct aaaaaccaaa gccctacaac tagagcaact ccaaacatag ctaaagctgc
    13501 aaaaggtaca ggagaagtcg cgttaattgt accgtttttt aagacatcta aaatcgctgc
    13561 aaaaggacct atagcattgg ctatatcatt ggctccgtgt gaaaatgcaa aactagaggc
    13621 tgtaaatatt tgaaaccatg agaaaattct atcagtagtt ttattaagtt ctgttttttt
    13681 aacgattttg actatagcaa atgttacaac ataacttata gttcctataa ttccgataat
    13741 ccaaaagttt tgtaaaatat ccaaagtgct aacattattt aaacctttaa ataaaaacat
    13801 tgccgaaatg atagcagcag caatacaagc aatgattggc atatgagttt ttaaaataga
    13861 gtaaatatct atatcttttt cttgatcctt aaattccttc attttatttc tatagaaatt
    13921 attttcttgt tcttcttcat ccaaagctat agcggaaagt tctttgattt gttcttcttg
    13981 ggattttgtt tttaaattta aaaaatattc ttctttgaat ttttttcttt cttttttgat
    14041 atttttcaaa tcatcattta gtttttctga tggttttaaa attttcttat caatatatga
    14101 ataaataata taagctacaa taccccctaa aagaggcgaa gctacccaag aaatagctat
    14161 tcttaaaatt tcactccatt taaccataga gagtgtttgg attccatcaa attttaaaag
    14221 ccccatcata atgctagcac ctacaatccc accaactata ctgtgtgtgg ttgatacagg
    14281 taagcctttc ttggttgcaa taaaaatcca aaccccagag cttaaaagtg cagcaagcat
    14341 aatgataaca aaaagcatag gatctaaaga atttggaaaa ataacaatac cgctgcgtat
    14401 ggtcttagta acttctgcgc ctgcgaagat tgccccgctt agctcaaaaa cagctgctat
    14461 aattaaagct tgtttaatgg ttactgtttt tgcgccaacg cttgttccaa aagaattggc
    14521 tacatcattt ccacctatat taaatgccat aaaaatgcca aatatagaag caagaataaa
    14581 aagaatcaat tgatgttgcg aaatataacc aaatccccaa ataacaaatg cgatagtact
    14641 gataataaaa ataacaaaag ctatgaggtt gtctttttgc attaataacc cttttttatt
    14701 ttaattatac acttatttac tttaaatttg ctaattttat tttttagtct ttgtggaatt
    14761 tttatttata ttattttttt ataataaata cttaaacaag aaataataag gaatataaga
    14821 ataatgaggg gtatttttta tataatagca ttgttttctt tactcaatgg cgatgaactt
    14881 acagaggctt tagcaaaaaa taataatcaa aattcttggg agcactttga ttataaaaat
    14941 accaaagaag ctccaaaaat tcaagaagag aatgtggatt ttaaaagcac ttttgatagc
    15001 ttactttcaa aaactttaga aaataataat ggtatagata aaacagatgg gaatttagat
    15061 tttcaaaatg aaaacgcgca ggttaaaaat ttaagttctc tttatgaggg ggagaataat
    15121 tctttgcttt ttcaaaaaga actttttgtg gctcaaaata attataatta ctcagggggt
    15181 ttaatcaatc gttatgaaaa agatgatttt ttatttggag ttaatggttt tattgataaa
    15241 caaaaggaac aaaaagatac taaaagcttt ggtacagagt ttggttatag taaatttata
    15301 aaggcttata gtaattatta tatacccaat gaagcagaaa aaaaattaca gcttggaatg
    15361 agttttgtaa ttccaactta taccgctttt gcttttgata taagtaagga taatgataaa
    15421 actaattatc aagtatctta ctctccttat agtgtattta gtttaaattt attgcgtcgt
    15481 gattatagtg caagagagac tgttgatgat actgttgttc aagttggatt tagttttaat
    15541 ttcaatgaaa gttttttaaa gcaatttaga aaaaaagata atactttaga ggaggttaat
    15601 cgatatgatt tcctccaaag aactcattag ttcattccag cattatgaaa tttttctgga
    15661 ttgtccatag cgtagcggaa tttttcccaa tcaatttgtt tatcccagat agcaacgatt
    15721 aaagctgcta ctgaatttcc acaaagattt ccaaccgccc tcatttcaga cataaatttg
    15781 tcaacaccta aaagaacacc tatagcagct actggtagaa cttgtgctaa ggttgcattt
    15841 gcttctgaaa tttccatatt tcctagagct gcaagcgtac ttccaagcac tataaaacct
    15901 gaaccagtta cacccactgc accttttgaa gctatcatta atactattaa aatactgatt
    15961 tcgtgtgcta aacttaaatt tacattgaaa gcttgtgcta gaaagattaa gctcatagct
    16021 agataaatat ttgtacaatc aagattaaaa ctatatcccg ttggtaaaac aagtccgact
    16081 gttgctttag aaagtcctgc tttttctagt tttctcatta aaggagcaag tgcagactcg
    16141 cttgaactgg ttgcaaaaac gatcaatact tctcttgaga taaatctcat aaatttgaag
    16201 atatttactt ttgcaaaata acaaatcaga cctaagattc caaatataaa aacaagacat
    16261 gaaatcagca ttactaaaag taaatatgct aagttgatca aagagccaat tccgtattga
    16321 gctatgagta cagccattgc tgaaaaggcg gcaataggac taaaatacat aatgatttgt
    16381 agaattttaa aaacaaaatt ttgtaccact tcaaaaactc tttgaattgc ctgtttgtct
    16441 tctattctca ttaaagaaat aatcaaagca gtaattatag caataactaa aacttgtatg
    16501 gtttttcctt ctgtaaaagg tgtgataata tcagtaggca tagcatcttt taaaatatgc
    16561 ataatctcag agctcgcact tacttctgtg gtttgagaaa tgtatttttg aacgcttttt
    16621 gtatcaagtt gacttggatc aagattcatt ccatggcctg gttgcataac atttgccata
    16681 aaaataccta tagcaagtgc taaagtactt acaacttcaa agtaaataac cgctttagca
    16741 ccaatgctac ctactttttt taaactttca agactaatga tgcccaaaac caaagtaaca
    16801 aaaataatag ggcctataag aacctttaaa gcacctataa aataatcaac tcctggtttg
    16861 ctagcaatgg ctaattcttt atctgtatag ccaagtacaa tacctgtaat aatgcctata
    16921 atcacccaaa atccaagact tttgataata cgtttatata aaggcggttt tctttcagct
    16981 aaagtttgac ttaaagtttc caagtttatt cactcctttt gatctttgta aaatataatt
    17041 ttaacaatgt gtatcgtaaa ttttaacaaa aaaac
//
LOCUS       DARATF010000032        16544 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.032, whole genome shotgun sequence.
ACCESSION   DARATF010000032 DARATF010000000
VERSION     DARATF010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16544
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.032"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..501)
                     /locus_tag="SB502_000819"
     CDS             complement(<1..501)
                     /locus_tag="SB502_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0434281.1"
                     /translation="MIINQIYSIDSCDDVELNIKRGSKLEFRLTYDDSKEIEAIVCII
                     PGGAEDMNSYIYIDDYLTRNYKVAVININYHCIGNRPHLGSSFYLDDIDKFILDTSLK
                     AINLKCINVYGINSYENLNNAFIRIDQEIQKLKLNQQLHQNYKLKTHVSFLPFKNEYQ
                     NFGIMQA"
     gene            complement(563..1303)
                     /locus_tag="SB502_000820"
     CDS             complement(563..1303)
                     /locus_tag="SB502_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEG0434282.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDDEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            complement(1300..2328)
                     /gene="pstA"
                     /locus_tag="SB502_000821"
     CDS             complement(1300..2328)
                     /gene="pstA"
                     /locus_tag="SB502_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEG0434283.1"
                     /translation="MGLYINFIFLCIFLGSVAYLGFPAFKQTYIFVEANRNSPAYDLL
                     SRAEQRKIRTGQITEKSWLLANSEVDQYMKQKYNRLSEKQRTLVDDLVQKGEIELKFN
                     SNFFLNGDSKSPENSGILSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNILTHF
                     IEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAAL
                     KSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGSILTLAGAIGETAPLMIIGMI
                     AFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAAGIIVLLGLLVVLNLSAILLR
                     KYFQGKLK"
     gene            complement(2385..3299)
                     /gene="pstC"
                     /locus_tag="SB502_000822"
     CDS             complement(2385..3299)
                     /gene="pstC"
                     /locus_tag="SB502_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEG0434284.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            complement(3309..4304)
                     /locus_tag="SB502_000823"
     CDS             complement(3309..4304)
                     /locus_tag="SB502_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEG0434285.1"
                     /translation="MKKILSLSVASLALCGALNAADLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGMMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     DFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVKDRKILNDELVKAGKVF"
     gene            4484..4987
                     /gene="ctf"
                     /locus_tag="SB502_000824"
     CDS             4484..4987
                     /gene="ctf"
                     /locus_tag="SB502_000824"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HEG0434286.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
     gene            5030..6406
                     /locus_tag="SB502_000825"
     CDS             5030..6406
                     /locus_tag="SB502_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEG0434287.1"
                     /translation="MTYFSLEFSILMIAFFAIYWTFKNDYKIQNILILIFSYIIYILI
                     NPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLCFFKYFPSIKGSVDEI
                     LNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSG
                     PIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNF
                     IQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPPNFNMPYLAKNLKDFWARWHI
                     SLSTFIRDYIYIPLGGNRKGIPRTVANILIAFILSGMWHGNTLAFIVWGLLHGIGIVF
                     IHLLTLSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAIEYFKACYYNFFQIPS
                     YNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPDGI
                     PDFIYSSF"
     gene            6407..7417
                     /locus_tag="SB502_000826"
     CDS             6407..7417
                     /locus_tag="SB502_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEG0434288.1"
                     /translation="MSVVRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQTNEETTNQENKSIDENLSKIDKVLNTLENDENTS
                     HKETNPTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFVKNSNIKYLVVLLGANDPWDIKKGGSYHRFGSPS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKREELNKKIQILNKIYSDEILKNKEIF
                     INTKLFFSVNDQYSAYIKDENNRSIKVRTDDGVHFTPSGAREMSKLLLEHIKLKEENA
                     SK"
     gene            7404..8582
                     /locus_tag="SB502_000827"
     CDS             7404..8582
                     /locus_tag="SB502_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEG0434289.1"
                     /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALT
                     SYVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKKFK
                     IGFLFKAKQNTNAFSIKDAKNRSYELRTTQINKWSYKELELDLPLQISALQKDAELGG
                     YFITNKNNNVFLDTIAINGAKSDLWLSWNQEVVKKELELLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
                     "
     gene            complement(8585..9955)
                     /locus_tag="SB502_000828"
     CDS             complement(8585..9955)
                     /locus_tag="SB502_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEG0434290.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYR
                     SYDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGADKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMEELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLGN
                     DQNRNLLIKNLQDLLAKQEGFAYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQNINIKQELI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDEN
                     LEFPKY"
     gene            complement(9957..11882)
                     /locus_tag="SB502_000829"
     CDS             complement(9957..11882)
                     /locus_tag="SB502_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434291.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKNLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNTQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLTLKTMSKEKKTFTLLKNQAFECFKIAYSSILAHKLRSILTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            complement(11882..13054)
                     /locus_tag="SB502_000830"
     CDS             complement(11882..13054)
                     /locus_tag="SB502_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEG0434292.1"
                     /translation="MKKKIVLIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSS
                     SSSSSSSSSNAIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPK
                     GYYVEILENQKAVKKYVKLGIKDSINTQILEGVNEDEELIVSSSADGLAPKMKLRF"
     gene            complement(13133..14323)
                     /locus_tag="SB502_000831"
     CDS             complement(13133..14323)
                     /locus_tag="SB502_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0434293.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILAIIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGPLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMTT
                     QFVNNIQSVISRRLAPYEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDEKAVLIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            complement(14332..15101)
                     /gene="ppk2"
                     /locus_tag="SB502_000832"
                     /pseudo
     CDS             complement(14332..15101)
                     /gene="ppk2"
                     /locus_tag="SB502_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849683.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
     gene            15308..>16544
                     /locus_tag="SB502_000833"
     CDS             15308..>16544
                     /locus_tag="SB502_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEG0434294.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKAQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSLIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTII"
BASE COUNT         5590 a         2845 c         2180 g         5929 t
ORIGIN      
        1 agcttgcatt ataccaaaat tttgatattc atttttaaat ggtaaaaaac ttacatgtgt
       61 ttttaactta tagttttgat gtaattgttg atttaatttt aatttttgaa tttcttgatc
      121 tattcttata aaagcattat ttagattttc ataagaattt ataccataaa catttataca
      181 ttttaaattt atagccttta aactagtatc taaaatgaat ttatctatat catccaaata
      241 aaaactagaa cccaaatgag gtctatttcc tatacaatga tagttaatat taataacagc
      301 aactttataa tttctagtca aataatcatc aatataaata taactattca tatcttcagc
      361 accacctgga ataatacaaa caatagcttc tatttcttta ctatcatcat aagtcaatct
      421 aaattctaat ttacttcccc ttttgatatt taattctaca tcatcacaag aatctataga
      481 ataaatttgg tttataatca tattaaacct ttttttggaa atttttaatt aattatatca
      541 tcaaatttcc aaaaaataaa tcttatccaa aagcaccgct taaataagcc ttggtttttt
      601 cttgttttgg attttcaaaa aattctttac tttcaccaaa ttctataagc tctccaagat
      661 gaaaaaatgc tgtataatca gctacgcgtt tgccttgttg catattatgc gtaaccatga
      721 tcatagaaag attatggctt aattctttta aaagctcttc tataacacct gagctaatag
      781 gatcaagtgc ggaagttggc tcatctaaaa gtaaaagctt aggttttatc gccaaagctc
      841 ttgcgataca aaggcgttgt tgttgtccgc ctgaaagagc tagggcattt tgctttaatt
      901 tatctttaac ctcttcaaaa agccctactt tttgtaagca atccaccact aaagcttctt
      961 catcatcttt gtttttaatc ataccatgaa gctttggtgc ataagagata ttttcataaa
     1021 tgctttttac aaaaacatta ggttgttgaa aaaccatgcc tacatttttg cgtaaggcta
     1081 ctacatcttg atttttaaca tcttttcctt caatttctac taaaccatcg atttttgcga
     1141 ttttatcatt cattctgtta aaacaacgca aaaaagtgga tttaccacat cctgaagcac
     1201 cgatgagtgc ggtaattttg ttttgttcta tttgcatatt gatatcaaac aaagcttgtt
     1261 tttttccata aaataaattt aaatttgttg tttttgctat cactttaatt ttccttgaaa
     1321 atattttctt aataatatcg cactaagatt taacacgact aaaagtccta aaagcacaat
     1381 aatacccgct gcggttcttt ctaaaaatgc acgctctggc atagccgacc atgagtaaat
     1441 ttgagcaggt aaaacgctag ttggatcaaa aatcgaactt gctacatcag ggataaatgc
     1501 tatcatacca ataatcatca aaggtgcagt ctctcctata gcccctgcta aagtcaaaat
     1561 agaacctgtt aaaatcatag gcatagccaa aggtaacata atacctttta ccatttgaac
     1621 ctttgtcata cctaaggcat aagcagcatt tttcatattg atatccacac tttttaaggc
     1681 cgctttggtt gaaacaatga taataggcaa actcatgatc gccaaagtaa gcccacccac
     1741 taaagcactt gaacgaggca ttccaaaaag attgataaac actccaagtc ctaaaagtcc
     1801 aaacaagata ctaggaatac ttgcaaggtt gttaatacac acttctataa aatgtgtaag
     1861 gatattttgt ggtgcaaatt cttctaagta aattgccgct gcaacgccta taggaacact
     1921 cacaaccata caaacaagca taacaagcaa agtccctaca actgaagata aaattcctga
     1981 attttcagga gattttgagt ccccatttaa aaagaaattg ctattaaatt taagctctat
     2041 ctcgcctttt tgcacaagat catcgactaa agttctttgt ttttcactaa ggcgattata
     2101 tttttgcttc atatattgat ctacttctga atttgccaaa agccaagatt tttcagtgat
     2161 ttgtcctgtt cttatttttc tttgttctgc gcgagataaa agatcataag caggagaatt
     2221 tctattagcc tctacaaaaa tataagtttg cttaaaagca ggaaatccaa gataagccac
     2281 acttcctaaa aagatacaaa gaaaaataaa attaatataa agccccattt tacaaagtct
     2341 tttaaaagac tttgaagctt tttgtctttt tttaaaaagt tttttcataa atttttcctt
     2401 ttgtgaaagc gattgataag ataaacgcta aacatattga tgattaaagt gatgacaaaa
     2461 agcaccaaac ctaaagaaaa agcacttaaa gccaaagaac tatcaaaagc ttgatctcca
     2521 cttaaagctt ctacgatttt taccgttacc gttgtcatat cttctaaaaa atttaaagtt
     2581 aaatttggac gcaaagaagc tgccatcacc actatcatag tttcgcctaa ggctcttgaa
     2641 agtcctaaaa gacaagctgc aactatacca ggaatagcct caggtaaaat cacggcaaaa
     2701 accacttctt tttttgtcat acctaaagca taagcgccat taatcctttt ctcgcttact
     2761 gcttcaatgc aatcttgaga taaagaagcc actataggta ctatcatgat ccccatgata
     2821 aaacctgcgc ctaaagcact ttgaaagctt gcttgtatgc caaataaaga aaaaaaccac
     2881 actataaaag gcgctacaac tatagccgca aaaaatccaa aaacaacagt aggaatccct
     2941 gcaatgattt ctaaaatagg ttttaagtaa tttttagatt ttttgccagc aaaaacacct
     3001 aaatatatag cacacataac ccctaaaggt aaagccgtta gcatagcaat caatgaaata
     3061 taaaaagttc cccaaaaaag cgatagcgcc ccaaaaacac cttgtttact cgtgccatct
     3121 gcattcataa aagctgcatc agctgcccac tgacttgaga ataaaaaggt aacaacgctt
     3181 tctttttgaa agaattttaa agcttcaatt aaaattgtaa gcatgatagc aaaacttact
     3241 atcacgctta caaaagcaca taaaaaaagt gcaaatttga ttattttttc ttttaacaaa
     3301 gtttttcctt aaaaaacttt tccagctttt acaagctcat catttaaaat ttttctatct
     3361 tttacgtgtt tttgagaagc ttttaattta tcatcactca aaggaacaag tcctattttt
     3421 tcaagctctc caccactttt tgccaaatca tcactcatat aaatttttgc aaaatcaaag
     3481 gcttcttttg gatttttctt agcattgata taaataaaca aacttcttgc aagttcgtat
     3541 ttttcatctg cgatgctttc ttcgcttggc gtaacaccat cgatattagc agcattgatt
     3601 ttgtctgaat tgctcactaa aaagctataa ccaaaaattc caaaagcatc cttatcaata
     3661 gtaagtttgg aaacgattag attatcattt tcaccacttg ggatataagc accatcttgg
     3721 cgtatggttt tatactcgcc tttatactca ggaatttttt tagacacatc actcattaca
     3781 agctcttcta tagtatctct tgttcctgaa cttgatggtg gaccataaac actaatttta
     3841 cgatttggta aatttttatt gatttgattc cagtttgtat aaggatttgg tataagtttt
     3901 ccattttgtg gaatttcttt tgctaatgct aagaaaagtt ctttttttgt gatatttaat
     3961 ggagcattgg ttttattttg agctaaaact ataccatcat aacctatcat catccctact
     4021 atatcagtta cccctgcttt tttgcaagtt tcaaattcgc ttaatttcat aggtcttgaa
     4081 gcattagaaa tatcagtagt tccttcacaa aataccttaa atccaccccc tgttcccaag
     4141 ctctctacta taggagtttt tgtatttttg atcgaagcat attcttcagc tacaaaagaa
     4201 gtaaaaggat acacagtcga tgaacctgcg atttttaaat ctgctgcatt taaagcacca
     4261 caaagtgcaa gacttgccac acttaaagat agaatttttt tcattttttc tccttaactt
     4321 taaaaaagta atggaagttt aaaaaaactt ggaaacattt tggaaacatt ttttattttg
     4381 tatttttctt aaatataatt tttaactatc aaaaaattta gcttgttttt aaaaaaataa
     4441 tatatcatta taaaacattt taaattttaa taaggagata agaatgcttt ctaaagaagt
     4501 tgtaaaatta ctcaatgaac aaataaacaa agaaatgtat gcggcaaact tatatcttag
     4561 tatgagttct tggtgctatg aaaacagtct tgatggagct ggagccttct tgtttgcaca
     4621 tgcaagcgaa gaaagcgatc atgctaaaaa gcttatcact tatcttaatg aaacagattc
     4681 tcatgtagag cttcaagaag taaaacagcc tgaacaaaat ttcaaatctt tacttgatgt
     4741 ttttgaaaaa acctatgaac atgagcaatt tatcacaaag tcaatcaata ctttagttga
     4801 acacatgcta acacataaag actattctac ttttaatttc ttacagtggt atgtaagcga
     4861 acaacacgaa gaagaagcac ttttccgcgg tatagttgac aagattaagt taatcggaga
     4921 acacggaaat ggactttatt tagctgatca atacatcaaa aatattgcat taagcagaaa
     4981 aaaataatct ttgccctact atgggcaaat ctcgctttgg attgaaggta tgacttattt
     5041 ttctctagaa tttagtattt taatgatagc tttttttgct atttattgga cttttaaaaa
     5101 tgattacaaa atacaaaata ttttaatttt aattttctct tatattattt atattttaat
     5161 caatccttat ttcgccttgg ttttatttat atataccttt tttatacact attttgcctt
     5221 gctaattttt gtgcgtcgca agcgttatat tttcgctact tgcatggctt ttattatttt
     5281 aaatttatgt ttttttaaat actttcctag catcaaagga agtgttgatg agatattaaa
     5341 ttttttcggt ttagaatttt taaatattga tttagtatta ccaataggaa ttagttttta
     5401 tacctttact tctatcacct atcttgtaga agtttatcaa aaacgccgtt tagaaagttt
     5461 tttaaattta gcaaccttct tatcattttt tccaacatta ctttcagggc ctattatgcg
     5521 aagttctttt ttctttgagc aggcctatca aaaacgcgaa tttaaacatg caaatttaat
     5581 catcatcttg cttgtttttg gtatagttaa aaaagtttta atagccaatt accttggaat
     5641 ttatgctaaa agtattttag actttccaca atcttataat ttcatacaac ttttaagtgc
     5701 aatttacgcc tatgcaattc aaatatactg tgattttagc ggatatgttg atttagtttg
     5761 tgcttttgct ttaatgttag gttttaccct tccgcctaac tttaacatgc cttatcttgc
     5821 aaaaaaccta aaagattttt gggctagatg gcatatcagt ctttcaactt ttataagaga
     5881 ttatatctat atacctttag ggggcaatag aaaaggaata ccacgcactg tagctaatat
     5941 actcatcgct tttatacttt caggtatgtg gcatggcaat acacttgctt ttattgtttg
     6001 gggtttgttg catggtattg gcatagtttt tatacatttg ctaactttaa gcaaatttag
     6061 tttacaaaaa attccagctt taggaagatt tttaaccttt caatttgtat gttttacttg
     6121 gattttcttt tattatagca aaaatctaga agatgcaata gaatatttta aagcttgtta
     6181 ttataatttc ttccaaattc catcttataa cgatatctat atgttggttg cttttggggt
     6241 tctttttatg atctatcctt tatttattaa ttttaaagaa tattgcatta agattttaaa
     6301 tcttactcca tttttgctaa aaccttttat tatagctttt attttacttt tggtttttgc
     6361 ttttatgcca gatggaattc ctgattttat ttattcgagt ttttagatga gtgtagttag
     6421 atttttcttt attttgatta tagtgcttgg cttggttgtt gtagttatga atcagagtat
     6481 tagctcttat atagaacaaa aatatcactt tgcattctat cctcataatg atcttttaaa
     6541 agaagccaat ggcttcaaaa ttaaattaga acaaattcgt gcaattttaa gcaacgaacc
     6601 cttgcctcaa actaatgaag aaactacaaa tcaagaaaat aaatcaatag atgaaaactt
     6661 aagtaaaata gataaagttc taaacacttt agaaaatgat gaaaacactt ctcataaaga
     6721 aacaaatcca accttaatcc aagatgcaaa tattagtttt atcgacaata ccaaattaga
     6781 actacaaaat ggagatgagt ttttatttat cggagattct ttaatgcaag gtgttgcaat
     6841 agccttaaat agagatttaa gaaatttaaa tcttaaggta accgatctta gcaaacaaaa
     6901 tacaggcctt tcttataaat cctattttga ttggtcaaaa gcaaccaatg aagcttttgt
     6961 taaaaactca aatattaaat atcttgttgt tcttcttggt gctaatgatc cttgggatat
     7021 taaaaaagga ggaagttatc atcgttttgg ctccccttct tggatagata tttacacaag
     7081 tcgtgtagat gaaatcatta agatcgctaa aaaacataaa gccaaagttt tttggtttga
     7141 aatccctcct gtaaaaagag aggaactaaa caaaaaaata caaatactta acaaaattta
     7201 cagcgatgaa attcttaaaa ataaagaaat ttttatcaac actaagctat tttttagcgt
     7261 caatgatcaa tactcagctt atataaaaga tgaaaacaat agaagtataa aagtaagaac
     7321 agatgatggg gttcatttta ctccaagtgg cgcaagagaa atgtctaaac ttttattaga
     7381 acacataaaa cttaaggaag aaaatgctag taaataaatt taaaattatc ttattgtttt
     7441 ttattatttt tactagctct tatgcacaaa atttaaatac aaatgacaca atagattcca
     7501 tactcaatca aaacaaaaat cactctgctt taacaagtta tgtattaaaa aaagatctta
     7561 aaaatctaga aaaaaaatta gaaaaaaatc aaaacatagg aattagaatt tatggagatt
     7621 ctcatatggc ggctgatttc tttccgcgtg tcataagagg atatttaatc cgttctaact
     7681 ctataggttt tgcctatcct ttacagccta aatatcaaca aaatcttaat cttgtttatt
     7741 cttataaaaa ctttgaaatt ttaaactcaa gaaatcctgc taatgctgga cataattttc
     7801 cactaggtgg gataatagcc aaagcaaaaa ctaaaggcgc aaaaatcaac cttgatacaa
     7861 ccctagataa aaaaaaattc aaaataggat ttttatttaa ggccaagcaa aataccaatg
     7921 cttttagcat caaagatgca aaaaatcgaa gctatgagtt aagaactaca caaattaaca
     7981 aatggtctta taaagaacta gaacttgatc ttcctttgca aatttcagcc ttacaaaagg
     8041 atgctgaact aggaggatat ttcatcacaa ataaaaataa taatgttttc ttagatacca
     8101 ttgcaatcaa tggtgccaaa agtgatttat ggctctcttg gaatcaagaa gttgtaaaaa
     8161 aagaactaga acttttacac aatgatttaa ttattcttgc ctatggttct aatgatgcac
     8221 tctttaaagg gtttgaaaaa caaaaattta aaaacaattt aaaaaaatgg attagtattt
     8281 taaaaactta caataaaaac gctgttatca tgctaatctc tccaccaact gtagttcaaa
     8341 aacaaggtaa aaactacaag cttgctcctg atttttttac catacgcaaa gcattatatg
     8401 aagttgctaa agaagaaaaa actcttattt ttgatatgca tcagtttatg caagatagtg
     8461 gaggaaaaaa caaatggata gaacaaaagc tttcgctcaa tgatgtacat cttactataa
     8521 aaggctatga gctgatggct aaaaagttac tcgaggattt aaaaaatatc atcgattatt
     8581 aaatttaata cttaggaaat tctaagtttt catcattaaa acttaaagct gtgatttgat
     8641 agtaagaatt aatggttttt aaaagattaa atctagctct tagaaattct tgctgggtag
     8701 aatttaaagt attgtttgca tccaaataat cttttaattc actttttcct aaaatatatt
     8761 tttcataata cgccttagtg ataagctctt gtttaatgtt aatattttgc aaattttgta
     8821 aaagcaaggt gtcgctttga taatctttat aattcaatgc aaattcattc atcgcacttt
     8881 gcaaggcttg ctcataagaa attaaaagtt gctcataggt aaattgtgaa attttgatat
     8941 tttgctttac tctaccataa tctaagaaag gtaaagaaat cttaacattg ccacttaaaa
     9001 tttcaaattt aaaactatca tcgatttttt tatcacttcc gcttaatgct ccacctaaag
     9061 aaatactagg caaaatagat ttttgcatgg aagaataatc cttaaaggct gattttaagc
     9121 tattgagttt agatctcaca tctgcacggt acgctaaagc ttttaaaggt atattaaaat
     9181 caggacttaa ggttttaaaa tcatttaaag ataaagtttt aaaatactct atataagcaa
     9241 aaccttcttg ctttgccaat aaatcttgta aattttttat gagtaaatta cgattttgat
     9301 cattgcctaa taaattttgt ttagctctta ataagctttg ttctatgttt aaaagatcta
     9361 attcttctat ttttccaagc ttgtatttat aattataaag ctcttccatt tgttctaaat
     9421 ttgaaagata agctcgaagc aatttatcta catcgttaaa ataagccagc tcaaacacat
     9481 catttaaagc tgtattgatc atacttattt ttaaattttc aagatcataa gcacttgctt
     9541 ttgcactaaa ttcactcgca cttgcactat ctcttaattt gccataaata tcaagctcat
     9601 agcttaaatt taaagaatta ttgaaatttt tactttgttt gcctgaattt aaatctttat
     9661 ccgcaccaaa acccaaattt ccacttaaag tcggatataa atcataatca atcaaatcag
     9721 ctctagccaa agccgaaagc aaagtttttc tagcaatatt aatatcacta ttattcaata
     9781 aaacaaaatt tagaaattca tttaattttg cattatcata agatctatac caatcataag
     9841 taagatttaa atctttcatt tgttcttgag ttaaatcaac ttctttaggc aagctaagtt
     9901 ttacaccaca agcgctcaag aaaaatgcta aaaaaatgct aagtattatt ttcattttat
     9961 tcctttgata atgcactaat aggatttaaa tttgctgcat ttcttgcagg gaaaaaacca
    10021 aaaaccacac cgataaacat agaacttaaa agtcccaaaa gcacagaata ggcatttaaa
    10081 atcataggaa aatccgtact taaagtatta aaagcaaaaa taacaaaaat cgataaaatc
    10141 acacctaaaa tcgcccctat agtacaaatc ataaccgctt cgattaaaaa ctgcatcata
    10201 atatcttctc ttctagcccc tatagccatg cgtatgccta tttctcttgt tctttcactt
    10261 acagaaacaa gcatgatatt catcactcct atacccccaa caatcaaagc aatcacagcc
    10321 acacaagcgg taagtatggt tgtagtgcgt ttatttgctg taatagcttg cttaaaagtg
    10381 tcagaattaa aagtaaaaaa atccttttgt ccgcgtttaa tttctaaaat tcttataata
    10441 gcattttcag ccaaagttga actcacatca tctttaacct taactatgat ttcacgcaaa
    10501 tttctatctc ctgtaagctt attcatcagt gttgtatagg gtatataaag acgtactaca
    10561 ttatcttcta taggcttgtc tgtatctttt tgcaaaactc ctataatctt aaaaggttga
    10621 gaattaaaaa gcaccacacg acctaaaata ttttcacttt tttcatcagg aaaaagattt
    10681 tttttagcat taaaatccaa tacagcaaca ttggtactat tttttacatc atcattattt
    10741 aaaattcttc ccgcatctat ccttaaacct tctatagcaa aattatttac ccctactcct
    10801 tcagctcttg cgcttaaaga aatattggta taagttgcca ctcctgaagt atttgaatga
    10861 gcatcaactg cttctaaata ttctaaagat cttagcgttt ctaaatcact aaaattaagc
    10921 cttgttttac ccgaacgcaa atccccaaat ccttttccag ggcgaatttc aatagtattt
    10981 gtcccaagtc ttgcaataga ctcaagcact ttagcttgag agcctaatcc taaagctaca
    11041 acacaaacta cagaagcaat acctatgatg attccaagca tagttaaaat agaacgaagt
    11101 ttgtgtgcaa gtatggaaga ataagctatc ttaaaacatt caaaggcttg atttttaagc
    11161 aaagtaaatg tttttttctc tttagacatt gtttttaaag tgagtttttc ttgagctttt
    11221 tcctttttag tatcgcttaa aatttctcca tctttaatct ctataaccct tttagcctgt
    11281 gctgcgattt ttggatcgtg agttactaag actatagtat gaccttgtgt gttaagtttt
    11341 tgtaaaattt caagcaccat aataccactt ttactatcca aagctcccgt tggttcatca
    11401 gctaaaataa gctctccgcc attgattaaa gctctcgcta tagaaacgcg ttgttgctgc
    11461 cctccgctta attcgtttgg cttagaatct aacttgtgag ctaattctaa atcatttaag
    11521 agttttttag cattttgact tctttcttgt aaattttttc ccgcataaac tgcaggtaaa
    11581 gaaacatttt ctttagcact cagcaagctt aaaagattgt atctttgaaa tataaagcct
    11641 attttttcac gccttaatct tgctttttca tcattattaa gtttagtgac ttcatactca
    11701 tcaaaaacat aagttccact acttggcgta tctaatgttc ctatgatatt caaaagtgaa
    11761 gttttaccac ttccactttg tcctataata gcaacaaatt cacctttttc tatacttaaa
    11821 cttacatttt ttaaaatggc attttcgcct atatttttgc aaatattttt aagaaaaatc
    11881 attaaaatct caacttcatt ttaggagcta agccatcagc acttgagctt actatcaatt
    11941 cttcatcttc atttacacct tctaaaattt gagtattgat agaatcttta atgccaagtt
    12001 tgacatattt tttaacagct ttttgatttt ccaaaatttc aacataatag ccttttggat
    12061 cgcttttaat tgcataagtt ggcactgcta aaacagcctt tgcacttgct acgacaattt
    12121 cattttgtat actcatacca atacgcaaaa aatcatcttt attggctaca taaaattttg
    12181 cgtaataata aatagcattt gatgagcttg agcttgaaga actcgaactt gatgagcttg
    12241 agcttgtact agaatcactc acttcagtat cagctggatc tatacttgca atcttagcat
    12301 gataagtttt ttgaggatca ttaagcaaag aaaaatcaag ctctgttcct acttttatct
    12361 tactcacatc agcctctgct atttccattc ttacttccat ttcgtctaaa ttagctatac
    12421 ggactatagt aggagtgttt tgattagcat taactgtttg tccttcatct acagctacat
    12481 taatcacaac accatccata ggagcagtaa tggttgtata acctaaatct ttttgtgcat
    12541 ttttaagagt gatttcaagc tgaactactt gagcattaag ctctgcaaca ttggctttta
    12601 aagtataata attatttttt tgagtttcta aattttcaag agaacttgct ttagctgcat
    12661 aaagtttttg ctctctttga tattgcttat tcgcaatctc aagggcaact tttttactct
    12721 ctaaattagc cttagcactt tcaagctgag cttttgtaat atctaaatcg ttttgttgtt
    12781 tatctttatc aatttgagcg atcaaatcac cttgctttac atgagttccc acatcaacat
    12841 aaagttttat aatttgtcca ctaacttgag cacccacatc gacttgatct ttggcatata
    12901 cctttcctac tgcctctatg gtttgagata tatctttttt ttgtattttt tgagttaaat
    12961 agctgatttt ttcatcatta ttaaaaaaaa taaaataagc cccaacactt ccaagtattg
    13021 caattaaaat gattaaaaca atcttctttt tcataataac aaatcctaaa gaaaaatcaa
    13081 gattaaattt tactcatttt ttgtgaattt tttgtgaatt tttaattcta ttttataaat
    13141 ttaaaaattc taaagccatc atcacatcac cctgcattaa aacttttaaa ttttcatcat
    13201 cccaacaaaa agtagaacta tgatgcaaag ctggatgatt taaatccttt gaaattccaa
    13261 caaatacata agcccccatt ctttctcgtg ttaaaaaagc aaaatcttca gcccccatgt
    13321 caggtttaga agaaacaatg atattttctt ctcctaagac ctttgcaaaa gcttttcttg
    13381 ctattaaaac agctttttca tcattaatca atggaggaaa ttctttagta tatttaagct
    13441 tataatctcc gccattggat tttgctgtag cagcagccac ttcttctaaa gaacttttta
    13501 aaatatcttg cgttttatca tttaaaaagc gcacagttcc ttttaaataa gcatttgtag
    13561 gaataacatt ataagtagtt cctgcacaaa tttgacctac ggtaatcacc cctgcttcat
    13621 aaggggctaa acgtctagaa ataacacttt gtatattatt tacaaattgc gttgtcataa
    13681 ttataggatc tatacaagtg tgcggatgag ctccatgccc tcctctgcca ataaattcca
    13741 aatcaaaaat atccgttcca gccatcattt caccacttac aatttgagca gtattttcaa
    13801 gcaaaggccc ccataaatga caaccaaaaa ctgcatcaac ataaggattt tccaatacac
    13861 ctgattctat cataggttta gctccaccgc ttccctcttc tgcgggctga aacataaatt
    13921 taatcgtgcc acaaaattca tctttaagct catttaatat caaagcagct cccaaaagcc
    13981 ctgctgtatg tccatcatgt ccacatgcat gcatcttacc atcaattttt gaagcatagc
    14041 ttagattagt tttttcttgc acaggcaaag catccatatc cgctcttaaa agaacacatt
    14101 ttggtttttt ctgactcttc ttttttcctt ctataatagc taaaattcct gtttttgcaa
    14161 tatttttttg atatttaatg ccaaactcat ctaaaatttt acacactaaa tgggctgtat
    14221 tttcttcttc aaattcaagc tcaggatgca tatgaatttg atgtcttaaa tcaactactt
    14281 tatcatagta ctttagtgct aaattttcaa ccagcttttg cattcttttc cttaatctaa
    14341 atcttttatt ttctcatctg cttttttact gtcaagtttt tccaaattcg cctccatttt
    14401 tcgtatttct tcttctccac tacgcactaa ttttgcatca attttggaaa aatctccagt
    14461 ttttttattt ggatattcta ccttagaaag tataaaacgc aataaattta atcttgcttt
    14521 tttcttatca tcagaagaaa taatagtcca aggacaagtt ggagtattag atgctaaaag
    14581 catagagtat ttagctaaag tatatttatc ccataattct tgcgattttt gatccacagg
    14641 agataattta tattgtttaa gtggatcgct tcggcgtttt tcaaaacgtt tttttgctcg
    14701 tcttttgata ctgaaaaata aaatttaaaa aaaataatat cactatttga aatcatattt
    14761 tcaaacaaag gcacttctct taaaaaatct ttatgttgtt gcggtgtaca aaaacccata
    14821 accggttcta ctcctgcacg attataccaa gatctgtcaa aaatcacaat ctcaccggct
    14881 gagggcaaat gtgctatata acgctgaaaa taccactgtg ttttttccac atcactaggt
    14941 ttttcaagag ccacaacgcg gcaaccacgc ggatttaaat gctcaatcaa acatttaatc
    15001 gccccacctt ttccagccgc atcacgccct tctataagta taagaacctt taaacccttg
    15061 gctttaacat gattttgaaa tttcaaaagc tcaatttgca aattctttaa atctttttca
    15121 tacttctatt atacttttct ttcttttaac agaaacataa atttcattct ttttaacaac
    15181 cgcttgcgtt tttggagaat tattttcttg cattttcaaa cctttataaa gtatttaaag
    15241 tgaatttacc ataataaatt ataattgaag ctaaaaataa aggaaaaaat aagtttttag
    15301 gaaatttatg cgtatttttg gtattatttt attaagtttt tgtttatgtt ttgcttctat
    15361 attatcttta aatgaagctt ttaatgtaaa atcaaactct tataataact ctatctcaat
    15421 tgatattgaa cttggaaaag atatttatct ttattctaat aaacttaaat tatatataaa
    15481 cgaaaaagat ataagttctt tgattaatct acctcaaagt tctacaagag gtaatgaaaa
    15541 tgtttattat caaaaattaa atttagcttt gccaaattta ttactagagc gctttgcaaa
    15601 aaataccaca aatttaatca aactcgaatt tcaaggctgt tctgaacaag gcttgtgtta
    15661 taatcctcaa acttggtact ttgatctcat ttctaaaaaa gatgcttttg aaatttcaaa
    15721 accttacaaa gctcaaaaaa cagataaaaa aactaaaatt gaatctgaag aaagctctat
    15781 agcaaatttt ttagcaacag ataacttttt ttggattttg ctaagttttt ttggctatgg
    15841 acttttactc tccttaacac cttgtatttt acctatgatt ccgattttat cttctcttat
    15901 cgtagcaaaa agtaatgcta aattttcaaa aaaatatagt ttttttctct ctcttatcta
    15961 tgtttttttc atgtctttag cctatgctat tgctggagtt atagcaagtt ttctaggagc
    16021 aagtattcaa ggaattttac aaaaacctat tattttaatt ctttttgctc taattttcat
    16081 agcttttgct tttgctatgt ttggagcttt tcgttttgaa ttgccattaa gatttcaaac
    16141 ctttatacat aaaaaaagcg aaaaagggaa aggagtttta ggtatagcca tcatgggatt
    16201 tttatctgct ttaatagtag gtccttgcgt agcagctcct ttagcaggtg ctttaattta
    16261 tatagccaat acaggcaatg ctttattagg tggtagtgcg ctttttatca tgagttttgg
    16321 catgggtata cctttgcttt tcataggctt aggattaggt tttattaaac ctggtttttg
    16381 gatggaaaaa gtaaaaattt tctttggttt tgttatgttg gctatggcta tttggatact
    16441 ttctagaatt attgaagaaa attacatttt aattgcctat ggaattttag gtgtattttt
    16501 tagtgttttt atgggaattt ttgaaaaaag ttttacaata attt
//
LOCUS       DARATF010000033        16311 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.033, whole genome shotgun sequence.
ACCESSION   DARATF010000033 DARATF010000000
VERSION     DARATF010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16311
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.033"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..492)
                     /locus_tag="SB502_000834"
     CDS             complement(<1..492)
                     /locus_tag="SB502_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434295.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRSAFSLFFLIPIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRISMGDFYLYIFSFFLAIFGLVSLFLNFLNLEKID
                     FVFIFIILPLLMIFLKKELHLQFIDNAYNDFRIVVIASFFTALFYAFYGLFFTYNELL
                     NLEL"
     gene            complement(473..2416)
                     /gene="ligA"
                     /locus_tag="SB502_000835"
     CDS             complement(473..2416)
                     /gene="ligA"
                     /locus_tag="SB502_000835"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEG0434296.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCANLDEVLKAYDELLVLREKKPMMMDGMVV
                     RVDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFNDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWYKQSFEAYANLEGFGEQMALSLCEFTRVNRTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LSKAKELEVKCINESAFNELVKE"
     gene            complement(2417..3559)
                     /gene="folP"
                     /locus_tag="SB502_000836"
     CDS             complement(2417..3559)
                     /gene="folP"
                     /locus_tag="SB502_000836"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEG0434297.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNALLMASKEQIQKLVVKEKLQDFGLK
                     NLALFLQKDFLKQKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYGAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDNIGV"
     gene            complement(3561..4160)
                     /locus_tag="SB502_000837"
     CDS             complement(3561..4160)
                     /locus_tag="SB502_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEG0434298.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFIPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            complement(4166..4702)
                     /locus_tag="SB502_000838"
     CDS             complement(4166..4702)
                     /locus_tag="SB502_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HEG0434299.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKATRPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSKVQLG"
     gene            complement(4703..5905)
                     /locus_tag="SB502_000839"
     CDS             complement(4703..5905)
                     /locus_tag="SB502_000839"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEG0434300.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGCPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNIEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            complement(5907..6377)
                     /locus_tag="SB502_000840"
     CDS             complement(5907..6377)
                     /locus_tag="SB502_000840"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEG0434301.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIARRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGVTININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEKKGYI"
     gene            6478..7545
                     /locus_tag="SB502_000841"
     CDS             6478..7545
                     /locus_tag="SB502_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEG0434302.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIIFQLK
                     QFNIQSNQIKTLFIGGGTPSCVNAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKDLITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYAAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKDKINILLKEKKLFYK
                     NKRYFNPNFLISDELTLYLSS"
     gene            7604..8020
                     /gene="tatB"
                     /locus_tag="SB502_000842"
     CDS             7604..8020
                     /gene="tatB"
                     /locus_tag="SB502_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HEG0434303.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDKVKNNLSGQNLNTEEKPNLSKLETQDKNGKINV"
     gene            8013..8750
                     /gene="tatC"
                     /locus_tag="SB502_000843"
     CDS             8013..8750
                     /gene="tatC"
                     /locus_tag="SB502_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEG0434304.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNIIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKVGLIDDSFLKRHFRIAVLVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPVPKDKESNE"
     gene            8743..9771
                     /gene="queA"
                     /locus_tag="SB502_000844"
     CDS             8743..9771
                     /gene="queA"
                     /locus_tag="SB502_000844"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEG0434305.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFH
                     TTFKNLHDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSHNPLFLAQIK
                     GRVKKDEILYFKEDLKARVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYTRTKTKNG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(9760..10725)
                     /gene="lpxD"
                     /locus_tag="SB502_000845"
     CDS             complement(9760..10725)
                     /gene="lpxD"
                     /locus_tag="SB502_000845"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEG0434306.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAINFKEKSQD"
     gene            complement(10722..11186)
                     /gene="ilvN"
                     /locus_tag="SB502_000846"
     CDS             complement(10722..11186)
                     /gene="ilvN"
                     /locus_tag="SB502_000846"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEG0434307.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            complement(11183..12883)
                     /locus_tag="SB502_000847"
     CDS             complement(11183..12883)
                     /locus_tag="SB502_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEG0434308.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYSKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELIKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCE
                     GYEISSKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            complement(12901..13344)
                     /locus_tag="SB502_000848"
     CDS             complement(12901..13344)
                     /locus_tag="SB502_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEG0434309.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            complement(13356..14375)
                     /locus_tag="SB502_000849"
     CDS             complement(13356..14375)
                     /locus_tag="SB502_000849"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HEG0434310.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEACGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            14468..14542
                     /locus_tag="SB502_000850"
     tRNA            14468..14542
                     /locus_tag="SB502_000850"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14500..14502,aa:Gln,seq:ttg)
     gene            14576..14651
                     /locus_tag="SB502_000851"
     tRNA            14576..14651
                     /locus_tag="SB502_000851"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14609..14611,aa:Met,seq:cat)
     gene            complement(14673..15545)
                     /locus_tag="SB502_000852"
     CDS             complement(14673..15545)
                     /locus_tag="SB502_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEG0434311.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLTFMPIKKENGRYVLESFALEKLSFKDIQNFATLSGIAELYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLNFFYKEKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKLHTKNENFIPDEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNCQIIDEDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKTR
                     LENILKSYLNNLSK"
     gene            complement(15542..>16311)
                     /locus_tag="SB502_000853"
     CDS             complement(15542..>16311)
                     /locus_tag="SB502_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434312.1"
                     /translation="DFFIISDLRELVREDFSLLRDKFLANFITPNDHTYAIYGNNYTY
                     PLPVRLKEECFYFLGDEKHYLSVYKSKEYLAMQENFIRFVFGKRIFYLLHPDSISNII
                     HAELELLQSENDLLNDFTSIVVKYSKTLEYEIYAFAKKVLLKACMKDLSLYDLTYNVQ
                     GKSFILKDFFTQKPNLGSIKFLLRHENIQYHLGKSLTQFINYPFSKSLTIIQEIRNEA
                     VHAKAPSLNEVKKLRNEILGIEGVSLLKRILTHKEIS"
BASE COUNT         5436 a         3005 c         2081 g         5789 t
ORIGIN      
        1 aagttctaaa tttaaaagtt cattgtaagt aaaaaaaagc ccataaaatg cataaaataa
       61 agcagtaaaa aaactagcga taacaactat tctaaaatca ttataagcat tatctataaa
      121 ttgcaaatgc aattcttttt ttaaaaatat catcaataaa ggtaaaatta taaatataaa
      181 aacaaaatca attttttcaa gatttaaaaa atttaaaaat aaagaaacaa gtccaaaaat
      241 cgccaaaaaa aagctaaaaa tataaagata aaaatccccc atactaatac gataaaacaa
      301 acttccctta atcaaagtag cttcttttat aatatttttt ctaagcttta aaaataaaaa
      361 gaattcccaa aaaagtgtta aaaaaatagg aattaaaaaa aataaagaaa aagcactcct
      421 ttgccaagtt agcaaaaagc caaaaaggct taaaagcgtt aaaatataag aactattctt
      481 taacaagctc attaaaagca ctttcattta tacattttac ttcaagctct ttagccttgc
      541 taagtttaga acctgcctct tctccaaaaa gcacatagtc agtcttttta gaaacagagc
      601 cgcttacctt acccccaagc ttttctatca aagccttaaa ctcatctctt gggcgtgaaa
      661 gagtgcctgt aatcacaaaa gttttaccaa aaatcacacc atcgcttttg atttcaagtt
      721 tttctatttt caaatttaaa agcttgtaaa actcatcaat tcttgtgcga ttaacacgcg
      781 taaattcgca aagacttaaa gccatttgct ctccaaaacc ttctaaattg gcataagctt
      841 caaagctttg cttgtaccac tctttaccaa aacttaaact taatttttta gccgcaacct
      901 cgccaatatg ctctattcct aaagctgtga taaaacgaaa aagctcacat tctcttgctt
      961 gttctatggc atttaaaaga ttgttaattt tcttttcttt aaagccttcc aaaccttcaa
     1021 aatcattaaa ttttaaatga aaaatactct caagcgtagt gatttttttg tgcttgtata
     1081 aaagttctac tatattttct cccagtccgt cgatattaag acatttttta gaaacaaaat
     1141 gaatgataga atttacaagt ctatcttcac aatctatatt ttgacatttt attaaagttc
     1201 cttcatccaa aagctcactt tggcaagtag gacaaagctt agggcgtgaa atttccatct
     1261 ctaaaccttc tctacgctct ttaaaaacct tagtgatttt agggataaca tcgccacttc
     1321 ttatcacgct tacaaaatca ttgattttaa catcaagtct tgcaatttca tcaaaattat
     1381 gaagggtggc tgattttact acaaccccat ctaaatttac aggttctaaa accgccacag
     1441 gagtgatcac tccacttctt cctacttgta aatttacccc tattaaacgc gtggtttttt
     1501 caagcgcagg aaatttaaaa gctgccataa attttggaaa ttttaccgta tagcctaatt
     1561 cttcacaaag tgcaagatca tcaactctta ccaccattcc atccatcatc ataggttttt
     1621 tttctcttag aactaaaagc tcatcataag cttttaaaac ttcgtctaaa ttagcgcaaa
     1681 gtcttacaaa atcatccttt aaaaaaccaa gctctctgat aaattgcatc acctcgctgt
     1741 gtttggtgaa atttaaggta ttttccccta ctccccaagg ataaaatttc aaatttcttt
     1801 ctttagtgat gcttgtatca agctgcctta aactcccact tgcagcattg cgtggattgg
     1861 caaataaact ttgatttaaa agggctcttt tttcgttgat tttctcaaaa tcatctttta
     1921 aaatcaccac ttctccacga atttctatcc tttctttata ggctatattt ttaggtatat
     1981 tttctatctc aaaaacatta agcgttatat cctcacccac ttcgccatcg cccctagtgg
     2041 cgccgcttac taatttacca ttttcataaa gcaaatttaa actcgctcca tcaaatttag
     2101 gctctataaa aaagtttttt tcacattttg cgcgttttgc ccaagctcta agctcactct
     2161 catcaaacac atcttccatc gaccacatac gctttaaatg agctattttt ttaaactcgc
     2221 tttgtatagt aggagctatt ttttgcgttg gagagtcttt tgaaatttca tctttatttt
     2281 gttcttcaaa aactcttaat tctctgatta aagcatcgta ttcttcatcg ctagccaagg
     2341 gttcatcttt ttcataatat gccctcatcc acaaattagc taaagcaact ttttctaaat
     2401 actcttcttt tttcatctaa actcctatat tatccattgc ctgcgctaaa gcaaaaagtt
     2461 gtttatgctc atataaatca tgcactctta taatactagc accattttca aaagccttta
     2521 aatgcaaata taaagttccc gctaaacgat ctttaatctc gctttgaaaa tacgcattaa
     2581 tcacactttt acgactcgca cctataagta aaggtttatt aaattgcaaa aaatgttcta
     2641 agtgtttgat taaaatcata ttatgccccg cactctttcc aaaaccaata cctacatcta
     2701 aaatactttc ttttactcca aaactttcta aaagctcaag tttttcttta aaaaacaaag
     2761 tcatctcatc aagcaaatct tcataaaaag gattatcttg catgttattt ggattgtttt
     2821 gcatgtgcat taagcaatat tttgccccat atttacttgc aagtttggct agattaagat
     2881 ttcttaaact tgtaatatca ttaatgagtt taaaaccctt atttaaagca tattctagac
     2941 aatattcatc aaaactatct aaactaaaaa ttgcttgttc gtaataattt ttctcataaa
     3001 ttaagtcaag tacttttttc agtcttttaa attcctcttc cttgccacaa tactcactcc
     3061 caggtcttga acttaccgca cctatatcga tatattcagg ctttaaagca agaaagtcat
     3121 taagcctttt ttcaaagtct tcttcactca cacgactttt tgcattaaaa ctgtcttcat
     3181 tgacattaat cactgccata agctcggctt ttttctgttt taaaaaatct ttttgcaaaa
     3241 aaagagccaa atttttaagt ccaaaatctt gaagtttttc tttgacaaca agcttttgaa
     3301 tttgctcttt acttgccatt aaaagcgcat ttgaatgagt gatttttgca gtaattactt
     3361 ctttatgagt aataagttca gctcctactc ttaaagcatc ttgttttaaa atatttgccg
     3421 caggagtaga aatatctttg ataaaaataa aatgaatttt tgttttttca ctcatgatct
     3481 tttgtcccat tttatgaggg tttatgaaag aacaaagcaa attaaaatcg gtgtttggat
     3541 tgattttaaa aaatttcatt ttatttcttt gtatagtaat ttaataaaag agtagctaaa
     3601 agcaccccgc ttttagaatt taattttgca agctcataac tttcataaaa aaactctaat
     3661 tcttcagcgt taaaatcttt atatttcaca cattctttag caagcaatgc gatttgatcc
     3721 ataagttcat ttttatccaa attttcattt ttttgcaaaa aatcaaaaag cattcttaaa
     3781 tccattcttt taagatctaa atcaagtttt ttaacttcct tttcaacttt tcttttttca
     3841 caaataagac gtgattttat agtaggtaaa agtaaatttt tagaaggtat cacaataaga
     3901 aatttaatat tttttggagg ttcttcaagg agtttaagta aaaaattttg tgcttctatc
     3961 ctataagaat ccgccattaa aacaataatt ttttcttcag tttctgcgat atagctttct
     4021 ttttcaaccg ctcttgcatc atcaagtaaa aattcatttt gtggtataaa aaatcttaat
     4081 tttttaatac caaaattatt aatcatttct tccttaatac ctaaaaaatc ttcactgata
     4141 ataatcttac taataaacaa aatatttatc ctaattgcac cttggaaaat aatattgcat
     4201 ccaaacttac atcaaaaagt tgatataaac taataagctt gatatccaag tctttatctt
     4261 tagaatttaa ataaaaacta tcttgtaact gctcatcaaa aagccacaat aaactatcat
     4321 ctcttgattt agcgattaaa gatttattat cagaagcact tcctatataa aaatatacat
     4381 aaccattagg aaaagaaatg tcaagcaagt cattaagtaa agctatatct tctgaacttt
     4441 gtactttctt cttacataaa gaatttaacg acacaaaagg gagcatggga cgagtggctt
     4501 ttgaatttat attttttaaa aaatactctt cataccaaga tctttgttca tcacacatta
     4561 atacaaaagt gcgtccttct aaaagatatt taagtcttgc agccatcaaa ggagcccatt
     4621 ctaaacgacg cgactccaac catgccataa aagctccgcc attgcgaata ttttcaagag
     4681 taaaacttaa aaaatcactc atttatttat caagtccgta gcactcatgt agtgctctaa
     4741 ctgcaagttc tccgtatttt tcatgaacta tcattgaaat ttttatttca ctagtagaaa
     4801 tcataccgat attaatcccc tcatcagcta aagctttaaa agctttactt gccactcctg
     4861 aatgtgattt catacctacg ccgactatag aaacttttac tacagcacta tcactttcta
     4921 tagttgtttt tgagcttaaa attttttgca tagcattttt ggctaattca agttcatttt
     4981 gaggaaccgt aaaacccaaa tttgtagcac catcaactcc aacattttgt ataatcatat
     5041 ctacattaat attttcattt gctaaaacag aaaaaatttc agctgcgatt ccaggcttat
     5101 cttctatatt tcttaaagtc actcttgctt gatttttatc caaagcaata ccacttacta
     5161 aagcttgttc cattccatct tcctttgtta tcattgttcc ttcgttattg ttaaaactac
     5221 ttctagttac taaattaaca tttaattttt ttgcaagctc tacagagcga ttttgcaaaa
     5281 cttttgcacc taaacttgca agttcaagca tttcttcata agaaatttta tccaatttct
     5341 ttgcctttgg ttcaattctt ggatctgttg tataaacccc atcaacatca gtataaattt
     5401 cacacaaatc cgcatttaaa gcacctgcta ccgccacagc acttaaatcg cttccaccac
     5461 gccctaaggt agttacatta ccttcctcat ctacaccttg aaaacctgct ataacgacta
     5521 ttttaccatt ttgaagttct gattttatcg cttttgtatc aatatgatga attcttgcct
     5581 ttgtaaaaac actatctgta ataattcctg cttttctccc agaaaatgat atagcaggac
     5641 aacccttttc atttaaggcg atagaaagta aagcgcttgt tacacgctct ccgctgctta
     5701 aaagcatatc catatcttta ccattaggag ttttactaaa atattcagct tgctcaataa
     5761 gagtatttgt caccccactc attgcagata ctacaacaac aagttgatta ccctgttgcg
     5821 cactttggat aaccctattg gctactgctt cgatacgctc aagtgttcca acgcttgttc
     5881 caccatattt ttgaactata agcattttag atataacctt tcttttcaaa atatttgatc
     5941 actttaacat aaatattttt tttgaaatga ttaatcattt caaaaatttg tttaacactc
     6001 acaaattgat aatcatcaaa ttcgggatgc ttggtattaa tattgattgt aacaccgtgt
     6061 tttaaacgca ctaaaaaata tttttgaatc tgcccatcat aaggatacat ttttttaaca
     6121 attttactcg gaaaatcata actcaaccat tctggatact cggcaatgat ttcaacctca
     6181 tcagtgccta tttcttcttt tagttctcta aataaagcgt ttttgacact ttcaccttta
     6241 tcaatacctc cttgtggaaa ttgccaaata ttatccatat cacttcttct agctataaaa
     6301 atcttacact caaaaggata agaacttgat aaaacaatag ctgcaacatt tggtctataa
     6361 tttttctcgt tttccacaat attgttcctt aaatctcaag gatataattt taacctaaat
     6421 caaatcaaat ttttattaaa atacattaaa aatttaataa aatattttag ggtttttatg
     6481 catttttata tccatattcc attttgtgaa agcaaatgta attattgcgc ttttacaagt
     6541 ttaaaaaaaa atgattatga aaaagcctat tttaaggctt taaaagaaga tattattttt
     6601 caattaaaac aatttaacat tcaatcaaat caaattaaaa ccttattcat aggcggagga
     6661 acaccaagtt gtgttaatgc gtataattat gaagatattt ttaaaatttt atatccctta
     6721 ctagataaaa atgtagaaat ttcatgcgaa gctaatccca actcagcaac attaaattgg
     6781 cttaaaaata tgaaaaatct aggagttaat cgcatttctt ttggagttca aagttttcat
     6841 cctaaaaaac ttcactttct tggaagaatt cacaatcaag aaatgattat caaaacatta
     6901 gaaaacgcaa ataaagtagg ttttaaaaat atcaatttag atcttattta tgatacgaaa
     6961 ttagacaata aaaaaatgct tgaatttgaa ctcttacact taaaacaaat caaggattta
     7021 atcacacacc ttagtgctta taatttaacc atagaatcaa acacagcctt tgctaaaaaa
     7081 gaacatttca aaaaaaatgc tcctaattta atgaaatttt tcatcaaaca acttctagag
     7141 cttgactttt ttcaatatga aatcagtaat ttttcaaaaa ccaaagccca aatttgcaaa
     7201 cataatcttg cttattggca aggaaaaaac tacctagctt gtggattaag tgcggtagga
     7261 ttttatgaaa ataaacgttt ttatgcagca aaaaatttaa aaaattacat agaaaatccc
     7321 acttttagat ctatagagca actaagttcc aaagacttga atttagagca cctattttta
     7381 ggacttagaa gtatagtagg gattgatgaa acaaaactca atcaatggca aaaagacaaa
     7441 ataaatatat tattaaaaga aaaaaaactt ttttacaaaa ataaaagata ttttaatcct
     7501 aattttctca ttagcgatga acttacttta tatctctcat cttaaattta agttttttaa
     7561 gtaaaatatt tatttaaaat atcaaatcaa agagtaatga ttaatgagtt ttggtgaaat
     7621 tatagttatt ttagttgtag cgattttagt cttaggacct gataaacttc cagaagctat
     7681 agtacaaata gcaaaaattc taaaggctgt aaaacgcaac atagatgatg caaaatcaag
     7741 catagaaaaa gaaatacgca tcaatgactt aaaagaagaa gctaagaaat acaaagatga
     7801 attttcaagc actaatgaaa atatacgcaa aaaactcagc tttgaagaat ttgatgacct
     7861 taagagagat attttagata aaacaaaggt agatttaacc tttgatagca gagatgataa
     7921 agtaaaaaat aaccttagcg gacaaaattt aaatacagaa gaaaaaccaa atcttagcaa
     7981 attagaaaca caagataaaa acggaaaaat aaatgtttga agaattaaga cctcatttaa
     8041 tagaacttag aaaacgcctt tttataagcg ttgcttgcat tgtagttatg tttattgtat
     8101 gttttgctct acgaagctat atcttagata ttctaaaagc tccacttata gctgttttac
     8161 cagaagtagc caaacatgta aatataattg aagtacaaga agccttattt accgcaatga
     8221 aggttagttt ttttgcagcc tttatctttt ctctacctgt aattttttgg caattttgga
     8281 aatttgtagc tccaggactt tatgataatg aaaaacgcct tgtggtgcct tttgttagct
     8341 ttgcgagcat tatgtttgcc ttgggggctt gtttttgcta ttttgttgta gtgcctttgg
     8401 cttttaaatt tttgattaat tttggtttaa atgaagattt taatcctgta attaccatag
     8461 gaacttatgt agattttttt acaaaagttg ttgtggcttt tggcttagct tttgaaatgc
     8521 ctgtaattgc ctttttcttt gctaaagtcg gacttataga tgatagtttt ttaaaacgcc
     8581 attttcgcat agctgtttta gttatttttg ttttttcagc ctttatgact ccacctgatg
     8641 ttttatctca atttttaatg gcaggaccac tttgcggact ttatggactt tctattttaa
     8701 ttgttcaaaa ggtaaatcct gtcccaaaag ataaagaaag taatgaataa agacttactt
     8761 ctttcaagct atgattacac tctagctaat gaactcatag ccaactatcc tacaaatcca
     8821 aaagaagatg ctaggctttt ggtttttgat cgcaaaaaca aagaaatttt tcacactact
     8881 tttaaaaatt tacacgactt tttacccaac tgcgcgattt ttttcaatga taccaaagtt
     8941 attaaagcaa gaatttatgg taataaagca agcggaggaa aaatagaact tttcttacat
     9001 caaccttttt taaattctca caatccactt tttctagctc aaattaaagg gcgcgttaaa
     9061 aaagatgaaa tcttatattt taaagaggat ttaaaagcgc gcgttgtaga acttttaaat
     9121 gatggtcttc gaaaagttca attttttcaa aatgataaaa ccttagacac ctcaaatctt
     9181 tacaacctgc ttgacaagat aggacatata cccttgcctc cttatattaa aagagaggat
     9241 gaaaaaagtg atttgaaaga ttatcaaagt atctttgcaa aaaatttagg cgcagtggct
     9301 gctccgactg caagtttaca ttttagtgag actatgcttg aaaatttaag aaaaaaacac
     9361 gaaatttatc atttaacctt gcatgtagga gctggaacct ttaaaagcgt ggaatgtgaa
     9421 aatatacaag agcataaaat gcatagcgaa ttttttaata ttccgcagca agcatgtgaa
     9481 attatagatt ctaaacaagc tattttaggc gtaggaacaa cggtaacaag aaccatagaa
     9541 tattatacaa gaactaaaac aaaaaatggt ttttgtgatc tttttttaca cccgcaaaat
     9601 ccacctataa gacaaaatca tcttttaacc aattttcatt taccaaaatc tactcttatc
     9661 atgctagttt cagcttttat cggtagagaa cagtgtttaa aactttatga actcgccata
     9721 aaagaaaaat atcgctttta ctcttatggc gatgcgatgc taatcttgtg atttttcttt
     9781 aaaatttatt gctattttag cttgaagttt tagccaatct ttttgaagca tgataggaaa
     9841 acctccataa acacgcccgc cttctaaatt tttactcaca ccgcctcttg cagctatagt
     9901 gctaaaatcg cctattttta aatgtccact cgttgcactt tgaccaccca taataacatt
     9961 gcgtcctaac tcacttgaac ctgaaattcc agtttgcgcc acaatgatac aattttgacc
    10021 tatattgcaa ttatgtccga tttgaactag attatctacc ttagtacctg ctttgataat
    10081 agtactatca aaaactgctc tatctatagt tgtacaagcc cccacttcta caaaatcttc
    10141 taaaaccacg ttgccattat gataaatttt ataatgttcg ccgtttttat tgtgcgcata
    10201 accaaaaccg tcacttccta ttacacaatt agcaagcaga tgacattttt taccgatttt
    10261 agtatcatta taaatcacta cattaggatg aataatactc tcatcaccaa tgctgacatt
    10321 atcgcctata taagctcctg ccataatgat tacattttca ccgatattta cattatcacc
    10381 tatataaaca ttaggcatga ttcttgcgct ttttgcgata ttttgtactt tttctttagc
    10441 tgtgcttatc aaaggtttag caaaaagctt gcttaaaaaa gcaaaactca aatgtggact
    10501 ttgagtaatc aaagctttag tatctttagg tactaaattt tcatattctt tagatactaa
    10561 aatagcagca gctcctgtgt gaggtatatc tttggtattt ttctcaccat cacaataagt
    10621 aagctctgta aaatttgctt tcaataaaga atttaaagca ctgatttcta tatcctcgcc
    10681 tttatattcc aagcttaaaa attctgctat ttcacttaat ttcatttaat ctccatcaaa
    10741 acagatccac tgcgaactat atcactagga ttgtattttt taattgtttt taaaaaatta
    10801 tcaatgcgat ttgcatcatc agcaaccatt aaaaacaaaa aattctcatt gctatttgca
    10861 atagtaccat tataagcttt caaaacggca tcaagtccac ctaaattttc atttaaagga
    10921 attttcacca aagccatttc tttgtcaata aattcttcac tttctatcac tttataagta
    10981 ggaatgagct tatgaagttg tttgactatc tgctcaaaag ttctttcatt tcctgaggtg
    11041 actatattaa tacgagaaaa ttctttattt tccaaaggcg ctactgtaag cgagtcaata
    11101 ttataacctc ttcctgaaaa aagtcctact atacgagata aaaccccatg ctcatttaaa
    11161 acaattactg ataaaaccct tctcattgtc tatcctttgc ctttggtaaa atcatattat
    11221 aaatcgcacc tcctgcaggc accataggta aaacatcttc aaagcgatca atttttacat
    11281 ttaaaagaga ggttttatca ctttttaaag cttggctaaa agcttgaatg aattcttctt
    11341 tgcttgaaat ttcataacct tcacaaccaa aaccttgagc aattttgata aaatcaggct
    11401 gagtgcttaa atcagtttgt gaaaaatgct ctttataaaa catactttgc cattgtctta
    11461 ccatacctaa aaaggcatta tttaaaataa tatttatagt ttttatacca tactcataag
    11521 cagtcataag ctcttggata ttcattaaaa ccgatccatc acctacgaaa ttaatcacca
    11581 cttcttcacc cacggcaagc tttgcaccca aagcagcagg taaagaatat cccatagttc
    11641 cttgccctcc acttgttgca agttgtcttg gataattaaa aggataaaac tgtgccaccc
    11701 acatttgatg ctgacccaca tcggtaataa tccttgcatc tggagccatt ttcgcacatt
    11761 cttcaatcac ccattgcggt tttaaaatct cattgctatc ttcataagaa agcggataaa
    11821 gttcattata acgctttaaa gtttcgtgcc attctttaaa agttgtgttg aaattttcct
    11881 ttttaagctc ttctaaaagc tctttaagaa cttctttaat atctcctact ataggataat
    11941 gcgcattgat aatctttgaa atagaactag gatcaatatc aacatgaact atagtcgcat
    12001 gtttagcaaa ttcacttgtt tttcctgtaa tcctatcatc aaatctcgct cctacactca
    12061 caagcaaatc acactcactt aaagccatat tagcagcata gcttccatgc atgcctgcca
    12121 ttttaagatt aaaaacatca tcacttctta aagttccaag cgccatcaaa gtttcaactg
    12181 ctggaatttt tgtaaatttt ataagctctc tgatttgctc gcttgcatta gaactgatgc
    12241 aacctccacc taagtaaaac aaaggtcttt ttgcttcttt taaaagctct gcaaattttt
    12301 taatttgctt tgagttaccc ttataaacgg gcttataagt cttcatggaa atttctttag
    12361 agtattccca aagtcccaaa gttgcactta cgtcttttgg cacatctata tgcacaggcc
    12421 caggtctacc acttcttgct atataaaaag cctcttttaa aatgcgtgga aactcttcta
    12481 tacaagtaac taaataatta tgctttacac aaggtcttga aatgcctact gcatcaattt
    12541 cttgaaaagc atctgtacca ataagagaat ttgccacctg ccctgaaatc aacaccaaag
    12601 ggatagaatc gctataagcc gtagctagac ctgtaatagt atttgtaaaa cctggtccgc
    12661 ttgtaactat agctacaccc acttctccgc tcattcttgc gtaagcatca gcagcatgca
    12721 aagccgcttg ttcatgacgc actaaaatat gtttaaaata cttttgattg taaatttcat
    12781 cataaatatt aagcgcagcg cctccaggat aaccaaaaac aattttaaca ttttcttctt
    12841 ttaaagcctc gcaaatcatt gccgaaccgc ttaactcttt cataataaca ctccaaaaaa
    12901 ttattgtaaa agctctttaa gtgctaaatt aagtcttttg ccatcaacac tcgcacctaa
    12961 ttttatttta gcttctttca ttaccaaacc ttgttctttt agtgaactta cgcccaattc
    13021 ttctataagt tgttttaagg ctaaagttaa ctcctcatca cttagttgtt taggcagata
    13081 aatttcaaaa agacttattt cattttgttc tttttgtgct aaatcttcac gatttgcctt
    13141 aagataaagt tcgattgcgt ctttgcgttt tttgatttca cttgcaatga ttttataaat
    13201 tctttcatta tccaactcta ttctttcatc cacttctatt tgcttaaaag ctgcatttag
    13261 agttcttaaa ctatctcttt taaaatcatc tttttgtttc attgcctctt tgatatcgtt
    13321 taaaatttgt tcttttaaag tcattttttt cctttttagt taaaattaca agctttaaga
    13381 tttaaaccaa aaccttctaa gcctatatag tctttatcac aactttgaga taaaagttta
    13441 atttcttcta taccaaaata tcttaaaatc tgtgctccta taccatagtt tttgtattga
    13501 gtagtactgg atttttctcc ttgcatgaaa actataacgc caccattttc actaagaaat
    13561 ttgatttgct ctaaaagttt tgaaaattta tctgaagtta aaagctcaaa atcactacca
    13621 ctgatatgaa atttaacatt ttcacatttt ttgatatctt taaagcaaaa agctatgtgt
    13681 tgggtttgat tatgatcact aaagataaat ttttctgctt taaagcctgc taaaacactt
    13741 tgactttttt cttcaagctt aataaggctt tcatgtttta ggcgatattc tataagatcg
    13801 cttacggcta tcatatttaa atcatgtttt tggcaaaaaa tttctagatc ttctcttctt
    13861 gccatatctc cattatcttt tacaatttca caaatcacac aagcaccttt taatcctgct
    13921 aatttacaaa gatcaaccgt gccttctgta tgacctgtgc gttctaaaac cccacctttt
    13981 tttgcgatta aaggattgat atgtcctggt cttacaaaat cactcgcttt agcattatca
    14041 tcggcaaaaa tttgtatagt catatttctt tcataggcgc taactcccgt tgtagcatct
    14101 tttgcatcta cggttatagt aaaagcagtt tcgtggtttg aagtattttt aggcaccatt
    14161 aaaggaagtt caaatttttt tgccaaagtt tcatctaagg ctacacaaac cacaccacaa
    14221 gcttctttta tcatgaaatt tactttttct tgagtgctaa attgcgcagg aaagattaaa
    14281 tcgccttcat tttctctatc ttctgcatct accataacaa gcatttttcc tgcttgtaaa
    14341 tccttaatcg cttgttctac gctaacaaat ttcattttta tttcctcaaa atttttaaaa
    14401 ttataactta aattgcttga caaataaatt aaaattcatt ataatcacac ttttaaaaaa
    14461 tatttattgg ggtatcgcca agcggtaagg caacaggttt tggtcctgtc attcaggggt
    14521 tcgaatccct ttaccccatc cacttcttat tttatatttc aaagatctta tatgccgcga
    14581 agtagagcag tggttagctc gtcgggctca taacccgaag gtcgggagtt caaatctccc
    14641 cttcgcaacc agttatggat ttaaaataaa ttttatttag atagattgtt taaataactt
    14701 tttaaaatat tctccagccg tgttttcagt tctataggag ctagaatttt tatatagggg
    14761 atccactgtt taaccaaatg taaaatttca tcttcatagg aaacttgagt gcttaaagta
    14821 tagcttgttt catcttcatc aatgatttga caattgctta gtatttcttt tctaaaaaaa
    14881 tattccttag catttttatc aagctttaaa atcacttctt tgctttctcc aagccagata
    14941 ttaggatcat tttggatttg ttcctcaagt ttttcatcgg ggataaaatt ttcattttta
    15001 gtgtgaagtt ttgaaatttt atctaaatta aaatgtttta atttatcgtt ttcatcccct
    15061 aaaagatacc aaattccctt gtaatttacg agtttgtaag gtttgatttg gcgttctttt
    15121 tccttataga aaaaatttaa tacattgtgt ttgagtatag ccacactaag atctttaaaa
    15181 agctcataat ccaccttttg aaaaccttca ttttttacca tcaaaacttt atttacccta
    15241 tggcttaaaa gatcaactat aaagccttga tcgagttttg gataaagctc agcaatgcca
    15301 cttaaggtgg cgaaattctg tatatcttta aagcttaatt tttccaaagc aaagctttct
    15361 aaaacatatc ttccattttc ttttttaata ggcataaaag taagtctttc gttaagatcc
    15421 ctttgtatgg ttcttgtatc gacattaaac tcttgtgcaa gctcttgggc gcttagactt
    15481 tccccattgt taaattttga taaaatctgc accaagcgta tgcttaattt gtcgtattct
    15541 ttcatgaaat ttccttgtgg gttaaaattc tttttaacaa acttacgcct tctatgccta
    15601 aaatttcatt tctaagtttt ttgacttcat ttaaacttgg ggcttttgca tgaacggctt
    15661 cattacggat ttcttgaatg atagtaagac tttttgaaaa aggataattg ataaattgag
    15721 ttaaactttt tcctaaatga tattggatat tttcatgtct gagtagaaat ttaatacttc
    15781 caagattggg tttttgggta aaaaaatctt taagtataaa agatttgcct tggacattat
    15841 aagttaaatc ataaaggcta agatctttca tacaagcttt taaaagaact tttttggcaa
    15901 aagcgtaaat ttcatattct aaggttttgg agtatttgac tacaatgctt gtaaaatcat
    15961 ttaaaagatc gttttcgctt tgtaaaagct ctaattctgc atgaatgata ttgcttatgc
    16021 tatcagggtg caagagataa aaaatccttt tgccaaaaac aaagcgtatg aaattttctt
    16081 gcatggctag gtattctttg cttttataca cgcttagata atgcttttca tctcctaaaa
    16141 aataaaaaca ctcttctttt aatctcacag gcaaaggata ggtgtaatta ttgccataaa
    16201 tggcataggt gtgatcgttt ggggtgatga aattggctaa aaatttatct cttaaaagac
    16261 taaaatcttc cctgactaat tctcttaaat cactgatgat aaaaaagtct t
//
LOCUS       DARATF010000034        16133 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.034, whole genome shotgun sequence.
ACCESSION   DARATF010000034 DARATF010000000
VERSION     DARATF010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16133)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16133)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16133
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.034"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            20..1606
                     /gene="yidC"
                     /locus_tag="SB502_000854"
     CDS             20..1606
                     /gene="yidC"
                     /locus_tag="SB502_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEG0434313.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNIT
                     QKNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DRKYQNEKGEFINLISKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDVNQNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFAKEHHKKTSGA"
     gene            1610..2428
                     /locus_tag="SB502_000855"
     CDS             1610..2428
                     /locus_tag="SB502_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HEG0434314.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQENKIETKNEKNKSQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            2421..3749
                     /gene="mnmE"
                     /locus_tag="SB502_000856"
     CDS             2421..3749
                     /gene="mnmE"
                     /locus_tag="SB502_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEG0434315.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGKLLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DAIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYFNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            3760..5946
                     /gene="purL"
                     /locus_tag="SB502_000857"
     CDS             3760..5946
                     /gene="purL"
                     /locus_tag="SB502_000857"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEG0434316.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGNIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPIRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVIGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPISEPKYLSEIKDYKFE
                     LKLSIQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASAIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAEIALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGVNLTSGFDDEKMIFDESASRAIVGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDNIELSKAELDKLYFESFKEQIQ"
     gene            5943..6713
                     /locus_tag="SB502_000858"
     CDS             5943..6713
                     /locus_tag="SB502_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HEG0434317.1"
                     /translation="MTLVLIILVILVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSSKKELSLDEAFTILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEKLKIGVEKFQKINEAYEKVKKHLER"
     gene            6716..8248
                     /gene="purH"
                     /locus_tag="SB502_000859"
     CDS             6716..8248
                     /gene="purH"
                     /locus_tag="SB502_000859"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEG0434318.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLDFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSANFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRGFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            8347..8808
                     /locus_tag="SB502_000860"
     CDS             8347..8808
                     /locus_tag="SB502_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434319.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     NTVSTSVFQTMRMAMNLGDPEKIKEAIEDVKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENINGVVYLRLIRPLIADESCVTCHEMLMQEV"
     gene            9265..9798
                     /locus_tag="SB502_000861"
     CDS             9265..9798
                     /locus_tag="SB502_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEG0434320.1"
                     /translation="MSNKANSANEKSFLLLEQMLKSLFNVANKVSIVSQNENELAKKV
                     ENMVNQAGSIQKATRMMDKIADKTKLPSLNAGIEVARAGAFGLGFSVIAEDDRQLAQN
                     SEEFLGNVAQITKELLQSINEVNAELKKNTQSIQALNDDTALLVDDANEVKLCNEDAR
                     ALVTQCTEKIKISQENI"
     gene            9814..9933
                     /locus_tag="SB502_000862"
     CDS             9814..9933
                     /locus_tag="SB502_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP-domain signal transduction protein"
                     /protein_id="HEG0434321.1"
                     /translation="MQENVEVSEKNEEISKILLQVADELKIVCHNLESELNQF"
     gene            9949..10383
                     /locus_tag="SB502_000863"
     CDS             9949..10383
                     /locus_tag="SB502_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEG0434322.1"
                     /translation="MKKTLQIALAATFFAGCASTSVTSSTSKGNNELVQDQLFKIEKI
                     IVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGIFKISNENGKLVLSNDEMKIFFK"
     gene            10482..11459
                     /locus_tag="SB502_000864"
     CDS             10482..11459
                     /locus_tag="SB502_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEG0434323.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWNPYLEEILQSYKEFVKVVS
                     EFQKVLLIAPKQSDFENFKDIKNVEYFKCDTNDTWIRDFGAIDIVENGRLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDIKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLVELPIPKPLYYEGRRLGATYANFVFINNALIVPF
                     YKDKNDEIIAKRLSKALPSHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            11456..12343
                     /locus_tag="SB502_000865"
     CDS             11456..12343
                     /locus_tag="SB502_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEG0434324.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            12340..13212
                     /locus_tag="SB502_000866"
     CDS             12340..13212
                     /locus_tag="SB502_000866"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HEG0434325.1"
                     /translation="MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFNKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFADLTKRFID"
     gene            complement(13224..14570)
                     /locus_tag="SB502_000867"
     CDS             complement(13224..14570)
                     /locus_tag="SB502_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEG0434326.1"
                     /translation="MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEY
                     EQNVSILPQFTYNINFDAKRYKKYFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNTGAPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFAIYSEDGKFFFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFP
                     LQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDAT
                     QRLLISSSVITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
     gene            14619..15962
                     /gene="pif1"
                     /locus_tag="SB502_000868"
     CDS             14619..15962
                     /gene="pif1"
                     /locus_tag="SB502_000868"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HEG0434327.1"
                     /translation="MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     DDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTF
                     FMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII"
     gene            15972..>16133
                     /locus_tag="SB502_000869"
     CDS             15972..>16133
                     /locus_tag="SB502_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434328.1"
                     /translation="MKKIFLSVFLVLSLNAQNLEIDKIRTDLYSKSGTNVLKKVEISL
                     EFDGNNLKEN"
BASE COUNT         5827 a         1948 c         3005 g         5353 t
ORIGIN      
        1 tctttaaaag gacaaatcag tgaataattc aaataatatt tttcagcaaa agcgtatact
       61 tttagctgtt gtgatttctt ttttattttt tgttatttat gattattttt tcattccaaa
      121 gcaaccttta aaaatagaac aaaacattac acaaaaaaat caacaaaaca caagcataaa
      181 taacactcct aatatacaaa ataccaccac aaatactcca agtgcggctt tagtttcgca
      241 agatagtgtg atatctaagg ttcaaagcaa gcattttgaa gcacaaattg actcttttgg
      301 tagaatttct gctttttatt taaaagatag aaaataccaa aatgagaaag gggaatttat
      361 aaatcttatt agcaaggaaa atagtcctta tcctttagaa atgcgtttta gtgatccaag
      421 tattaactca gaggctttta aaattcctta tgtcgctaac gctagcaatc tttttgttga
      481 tgaaaatgga agtcaagttt taaaactcac tcaaaatctt tccggattga aaatcgaaaa
      541 agatattact ttttatccaa aagggaatta tgagatagaa gttaaactca gcaagaatgc
      601 aaattatttt ataagtccag gatatcgtcc aaatattgcc gtagatagtt atacggttca
      661 tggtgcttta gtaatggata ataaagaaac catcgaaact tataaagatg gagatgtaga
      721 aaaggatgaa agtgctaata atgtcgtaat gacttcggct tttgatagat actatgcaac
      781 tttcttttat aattttgata aacctttaaa tgtggcaatc agcaaggatg ttaatcaaaa
      841 ccctatagtt tttgcttata gtgataatga atttaaagca gggggctata taggctctaa
      901 agaacatgtg attttaagaa gtatagatcc acgccttgaa gcagttgttg aatatggttg
      961 gtttactttt attgctaagc ctatgtttga gtttttgaat ttcttgcatc agtatatagg
     1021 aaattggggt tgggctatcg ttgtgatgac tttaattgtg cgtattattt tattcccgct
     1081 aacttataag tctatgattt ctatgaataa acttaaagat cttgctccta aaatgaaaga
     1141 tattagagag cgttataaag gcgatccaca aaaaatgaat atgcacatga tggagcttta
     1201 taaaaaacat ggtgcaaatc ctatgagtgg ttgtttgcct atacttttac aaattcctat
     1261 tttctttgct atttatcgcg ttttgcttaa tgctattgag ctaaaagcag ctccttgggc
     1321 gttttggata catgatttat cggtaatgga tccttatttc attttgccta ttttaatggg
     1381 tgcaacgatg tttttacaac aacttattac acctatgact atacaagatc ctatgcaagc
     1441 taagattatg aaatttttac cagtgatttt tacttttttc tttatcactt tcccagcagg
     1501 acttacgctt tattggtttg taaataacct ttgttctttg gttcaacaat gggttatcaa
     1561 taaaatattt gctaaagaac atcacaaaaa aacaagcgga gcatgaaaaa tgaaaatcga
     1621 agccattgat cttcaaagtg ccttaacaga agcttcaaga agtttagaat gttctgtgat
     1681 ggacttagaa tatgagatta ttcagcatcc aagaaaaggt ttttttggat ttggaagaaa
     1741 aaaggcaatt atagaggcta aagcaaaaaa aaggattttg aaaaaaaatc ctaaaaaaga
     1801 atttacaagt tcaaaaaatc acaaaccaga aacacatgag ccaaaacaag aaaacaagat
     1861 tgaaacaaaa aatgaaaaaa ataaaagcca aaaagaaaaa tatacagtaa aaagtgatga
     1921 aatttttgat agttttcatc gagaaagcaa aggagtgcgt aatactcagg atattttaga
     1981 tgagattcgc attcagcttg taaaactttt agaaagctcc cagtttaaaa tagagcttag
     2041 tgaacttaga atgtatgatg aagattgcgt tttgattcga ttggatgggg aagatgctgc
     2101 tttgatgata ggtaaagaag cacatcgtta caaggctatt tcttatcttt tacataattg
     2161 gatcaattta aaatataatc ttttagtgcg ccttgagatc gctcaatttt tagaaaatca
     2221 aattcaaggt atgcagcttt atttacaaaa cgtgattgaa aaaattaaaa ttcatggacg
     2281 cggacaaacc aaacctttag atggggtttt gataaaaatc gctttagagc agttaagagc
     2341 tgaatttcca gataagtatg taggaattaa gcaaaataat gatcaaagat ttgttgtaat
     2401 aaacgacttt ttcaaaaaag atgagtgata ctatagcggc tattgccaca gctcatggtg
     2461 tgggttcgat ttctattgta agattaagcg gtgaaagggc tttagaattt gccttaaagc
     2521 ttagccacaa aaccaaactt accccacgcc atgctacttt tacaaaactt tttaatcaaa
     2581 ataatgaaat tatcgatgaa gctataatga tatattttaa agccccttat agttttacag
     2641 gggaagatat agtagagttt caaactcatg gaggatttag tgtgagtgaa gttttactcg
     2701 aagaacttgt gagtttagga gcaagacttg ctttagcagg ggaatttagc aaaagagcgt
     2761 gtttaaatgg caaaatgact cctttaaaag ctttaaatat acaagatctc atactttcaa
     2821 aatctgcact tgcagctaaa attatagcac gcaacatgca aggaaactta ggaaaacttt
     2881 tagaaaaaat tcgcacagat ttggttaaaa ccttggcttt tgtagaaact agcattgatt
     2941 atgctgatga tgatttacct tctgatttat tagaacaaat ttctactatg tgtgaagaaa
     3001 attctaaaat tttaaaagaa atttatacac tttctcaaag caaaaaagga cttatagaag
     3061 gttttaaaat cgctattgta ggtaagccaa atgtaggcaa atcttcgctt ttaaatgcct
     3121 tgctttctta tgaaagagct attgtttcag atatagcagg caccactcgt gatactatag
     3181 aagagagctt taaattagga acgcatttat tacgcattat agatacagca ggtattaggg
     3241 aaagtaaaga tgctatagaa caaatcggcg tagctttaag taaaaaaagt ttagaagatg
     3301 cagatattat tttggcagtc tttgatgctt caagagtgca agataaagaa gatgagaaaa
     3361 tttttgactt attagcaaat actgataaaa aaatcttttg gattttaaat aaaagtgatt
     3421 tagaaaatgt tttcaaaaat actcaaaata aaaattttat caagcttagt gctcaaaaag
     3481 acatcacttt attaaaagaa gaattgcaaa attattttaa ttcttttgat agcgaaggta
     3541 ttatggtaag ttctttagat cttattaatg cttgtaaaat ttcaagtgaa gcgattttta
     3601 gagctaaagg gcttttagag gaaagttctt tagaactttt tgcttttgag cttaatttag
     3661 cgattaatga acttgcaaga tttaccaaag attttcaaag agatgaaatt ttagacgaaa
     3721 tgtttggtaa tttttgttta ggaaaatgaa aggataaaaa tggacaaaga aaccataaaa
     3781 gcacataaaa tcagtgatga agaatatgca caaattttag aaattttagg acgcgagcca
     3841 aatttattag aacttggggt tatttctgcg atgtggagcg agcattgctc ttataaatcc
     3901 agtaaaaaat atcttaatgg ttttccaact aaagcacctt gggtgattca aggcccagga
     3961 gaaaacgcag gggttattga tattgggcaa ggtatggcag cagtttttaa ggtagaaagt
     4021 cacaatcatc ctagctttat cgagcctttt gcaggtgcgg ctacgggagt agggggaatt
     4081 ttgcgtgatg tttttactat gggtgcaaga gtggttgcag ggctaaattc tttaaaattt
     4141 ggcaatattc atgatgaaaa atgcggcaaa catcaaaaat accttgttaa aggtgtggta
     4201 aatggaattt ctcattatgg aaattgtatg ggtgtgccaa ctataggtgg agaatgtgct
     4261 tttgatgagt gttttaatgg aaatatctta gttaatgcct ttgctttagg ggtttgtaaa
     4321 agtgaagata tcttttatgc taaggctgaa ggtgtaggaa atcctgtgat ttatgtgggt
     4381 tcaaaaacag ggcgtgatgg acttggtgga gcggttatgg caagtgatag cttcaatgaa
     4441 gaaagcaaat ctttgcgtcc tacagtgcaa attggcgatc ctttcagtga aaaacttctt
     4501 atggaagctt gtttagagct ttttaaaact gattatattg tgggtattca agatatgggt
     4561 gctgcagggc ttacttcaag ttcttttgaa atggcaggaa gaagtggcag tggcatgaaa
     4621 ctttacttag ataaaactcc tatacgtgaa agcggtatga ctccttatga gttaatgctt
     4681 agcgagtctc aagaaagaat gcttatttgt gcgaaaaaag gctatgaaga taaggttata
     4741 gaaattttca aaaaatggga tttagatgct gtggttatag gtgaagttac caatacagga
     4801 aaaatggagc ttttttggca tgatgagctt gtagggctta ttcctatcga gcctctaagt
     4861 gaaaaagcgc cgattttaag tcgtcctata agtgagccaa aatatttaag tgaaattaaa
     4921 gattataaat ttgagctaaa attaagcatt caagagcttt ttatacaaat gcttcaaaat
     4981 gaaaatatta acaacaaagc ttttatttat gatcaatttg attcaagtgt gcaaaccaat
     5041 actataaaag ctgatggaag attaggtgct agtgccattc gtatcaaaga aaatggtgca
     5101 agtgtggcta tggctataga atgtaactca cgcttaaatt atgtaaatcc taaaatagga
     5161 gcagctttag cagtagcttc agcaggaaga aaagttgctt gcacgggggc taagcctttg
     5221 gcaataagtg attgtttaaa ttatggaaat ccgcaaaatc ctgaagtgat gtggcaattt
     5281 gcacaaggtt gcgaaggcat taaagaagct tgtaaagagt taaatacccc agtagtaagc
     5341 ggcaatgttt cactttataa tgaaactgaa ggcgtaagta tttatccaag tcctactata
     5401 gtaagcgtag gggttttaga agatgcaaat aaaaccttaa aagctagttt tgaaaaagaa
     5461 aatttaagtg tttatctttt gggtgaaagt ttaggggaat ttggtggatc tatggtaatg
     5521 aaaatccaag ataaaaaagt atcaggaagt cttaaagagc ttgattataa agctgaaatt
     5581 gcactttggg atttgcttta taaagccaat caaaattctt tacttgagtg tgccaatagc
     5641 gtaggaatag ggggtattgc tatgactttg gcaaaaatgt ttgctatttc tagtgtgggt
     5701 gtaaatttaa caagtggttt tgatgatgaa aaaatgattt ttgatgagag tgcaagtcgt
     5761 gctatagtag ggcttagcaa agaaaatgaa gaagcttttt taaatttagc caaagaattt
     5821 ggagtaaaag cttataaatt aggtgtgagt acaagccaaa aacattttaa acttgataac
     5881 attgagttaa gcaaggctga acttgacaag ctttattttg aaagttttaa agagcaaatc
     5941 caatgacttt agttttaatt atactcgtta ttttggtgtt ttactggtat tataaaactt
     6001 ggggaaaaca ggatttttta aactcagcta caagaggagc caaaggcttt gctaagggtt
     6061 ttgctcgtgg ggttatggaa gaaagaatgg atgagtttaa aaggcgtatg aattactatg
     6121 ttatcgcact tttggcaaaa attgcaaaaa gtgatggtag ggtaagtgaa aatgaagctg
     6181 aaatgatcaa agatctttta gatgcaaatg ccaaagatga aaaagaaaga gcttttttaa
     6241 aagcaagttt taatgaacat aaagaaaatt taagtgatgc tttttatgtg gcaaaagatt
     6301 ttttaaaaga agtgcctttg cctaaaaatg agcgttttaa tgtcttgcgt gtgcttgttt
     6361 ttatggcttt aatcgatgca gattttaatg ctaaaaagcg tgaaatttta gagcaaatcg
     6421 ctaaagcctt tgatatagca aaaagcgaat tagacgcttt tatagcaagt ctttcaaatt
     6481 taaaaagttc taaaaaagaa ttaagtcttg atgaagcttt tactatttta gaacttccaa
     6541 ataatgcaga tttaaatgcg gtaaaaaaac aataccgcaa tttagcaaaa aaatatcatc
     6601 ctgatatttt aaatgcaaac aatgttagtg aagaaaagct taaaatcggt gtagagaaat
     6661 ttcaaaaaat caacgaagct tacgaaaaag ttaaaaaaca tttagaaagg taaaaatgag
     6721 agcattactt agtgtgagtg ataaagaagg catagtagaa tttggcaaag agcttgaaaa
     6781 tttagacttt gagattcttt caacaggcgg gacttttaag cttttaaaag aaaatggaat
     6841 aaaagttata gaagtgagtg attttacaaa gagtcctgag ctttttgaag ggcgtgtgaa
     6901 gactttgcat cctaagattc acggtgggat tttgcataaa agaagcgatg aaaatcatat
     6961 caaacaagca aaagaaaatg aaattttagg cattgatcta gtttgtgtaa atttatatcc
     7021 ttttaaaaaa accactatca tgagtgatga ttttgatgaa attatagaaa atatcgacat
     7081 aggtgggcct gcgatgataa gaagtgcagc aaagaactat aaagatgtga tggtgctttg
     7141 cgatccgctt gattatgaaa aagtgattga gactttaaaa aaaggtcaaa atgatgagaa
     7201 ttttcgttta aatttgatga taaaagctta tgagcatacg gcaaattatg atgcttatat
     7261 tgcaaattat atgaatgaac gctttaacgg aggttttgga gcgagtaaat ttatagtagg
     7321 gcaaaaagta tttgatacaa aatatggaga aaatccacat caaaaagggg ctttatatga
     7381 gtttgatgcc ttttttagtg caaattttaa agctcttaaa ggcgaagcaa gttttaataa
     7441 tctaaccgat attaatgcag ctttaaactt agctagtagc tttgataaag ctccagctat
     7501 tgctatagta aaacatggaa atccttgcgg ttttgctata aaagaaaatt tagtacaaag
     7561 ctatatacat gctttaaaat gcgatagtgt tagtgcttat ggaggagtgg ttgcaatcaa
     7621 tgggactctt gatgaggctt tagcaaataa aatcaatgaa atttatgtag aagtaatcat
     7681 cgcagccaat gtagatgaaa aagctttagc cgtgtttgaa ggtaaaaaac gcattaaaat
     7741 tttcactcaa gaaagcccgt ttttaatccg cggttttgat aaatatgatt ttaaacatat
     7801 tgatgggggt tttgtatatc aaaacagtga tgaagtgggc gaagatgagc ttaaaaatgc
     7861 aaagcttatg agtcaaagag aggcaagcaa ggaagaatta aaagatcttg aaatcgctat
     7921 gaaaatagca gcgtttacca aatcaaacaa tgttgtttat gtaaaaaatg gcgctatggt
     7981 ggctataggt atgggtatga caagtagaat cgatgcagca aaggcagcaa tcgctaaagc
     8041 taaagaaatg ggacttgatt tgcaaggttg cgttttagca agtgaagcct tttttccttt
     8101 tagagatagc atagatgaag caagtaaagt aggggttaaa gctatagtag aaccaggcgg
     8161 aagtataaga gatgatgaag tggtaaaggc ggctgatgag tatggtatgg cgctttattt
     8221 tacaggagta agacatttct tacattaagt ttaatggaat gttatgtttt ttacacataa
     8281 ttcaataaaa attaaataaa ttatgtgtaa aatatttccg aaaaatttta tttttaggaa
     8341 actatgatgt ttaaaactat aggatttaag gtttctgctg caatttttgt ggtgttgctt
     8401 ataagtttca ttgtaatgca agtgatttta aatttggatt ttaaaaatac tgccaataaa
     8461 atgagcaggg caaatttaaa taccgtaagt acttctgttt ttcaaacaat gagaatggct
     8521 atgaatttag gagatcctga aaaaattaaa gaagccattg aagatgtaaa aagtatagag
     8581 ggtattagtg atattaaaat ttatccttca aaagatacta tagatctttt tgagatgaaa
     8641 gcccctcaaa tttcaaatga taagcgtatt atagaacaat tttcaaatcc taaaattcaa
     8701 gctttagaag aaaatataaa tggtgttgtg tatttaagat tgatacgccc tttgattgca
     8761 gatgaaagtt gtgttacttg tcatgaaatg ctaatgcagg aagtgtgatt ggggttatgg
     8821 atatatcaca ttctttagaa ggtgtttaaa aagatataag caaaaccggt caatcttata
     8881 ttataatatt tactattgct ttgattttta ccctttgtgg tggttctttt aatgcttaaa
     8941 gttgttgttg gaaagcccgt tttagagctt ttaaatcatg ctaaagaatt agctcaagga
     9001 agcggcaatt ttaaaagctc gtatttcagt taaaggtcaa gatgaaattg ctttagcttg
     9061 tggatatatc aatcaattta tcgaaaaaac tcacaaggca gttagcagtg caagtcataa
     9121 tttaaaaaat gtagaaaaac aaagcaatct tttaaattca aatgctattt tttaagtgat
     9181 atcagttcac aaagtcataa gcaaatagat caaagtttta aacttggtgc aaatgttggt
     9241 aatgaactta gagaacttgc tagtttgtca aataaggcaa atagtgccaa tgaaaaatcc
     9301 tttttattat tagagcaaat gcttaaatct ttgtttaatg ttgctaataa agtatcaata
     9361 gtatcccaaa atgaaaatga attggctaaa aaagttgaaa acatggtcaa tcaagcaggt
     9421 agtatacaaa aagcaactcg aatgatggat aagatcgcag ataaaacaaa attaccatcc
     9481 ctaaatgctg gcatagaagt agctagggct ggtgcatttg gactaggttt ttctgtaatt
     9541 gctgaggatg ataggcagtt ggctcagaac agtgaagaat ttttgggaaa tgtagctcaa
     9601 attacaaaag agcttttgca aagtattaat gaggttaacg cagaattaaa gaaaaatact
     9661 caaagtatac aagctttaaa tgatgacacc gctttattgg ttgatgatgc taatgaggtt
     9721 aaattatgta acgaagatgc tagggctttg gtaactcaat gtactgaaaa aataaaaatt
     9781 tcccaagaga atatataaaa tttactttct cgtatgcaag aaaatgttga agtaagtgaa
     9841 aagaatgaag aaatttctaa aattctactt caagttgcag atgagttaaa aatagtgtgt
     9901 cataatctcg aaagcgaact taaccaattt taaatttaaa ggaataaaat gaaaaaaacg
     9961 cttcaaattg ctttagctgc aacttttttt gcaggttgtg ctagtacttc tgttacttca
    10021 tctacttcta aaggtaataa tgaacttgta caagatcagc ttttcaaaat agaaaaaatt
    10081 atagttaatg gtaaaacttt tgatccaaaa aacgcagagg aaagtccaaa tattagtttt
    10141 gaaaataata aattttatgg ttattcaggg tgtaatcgtt tttttggttc ttaccaaact
    10201 aaggcggata ctttgcaaat cgaaggtgat cgcgtagctt caactcaaat gctttgtcat
    10261 ccaatggatg taatggattt tgaaaattct ttcctttcaa atttcaaagg aatttttaaa
    10321 atttcaaatg aaaatggaaa acttgtttta agtaatgatg aaatgaagat cttttttaaa
    10381 taatacccta aagcctcgaa atatcgaggt aatcttctta aatttgacaa aagtctaaaa
    10441 aatgatacaa ttataatttt attatcaaaa aaggtagtta aatgataaaa tcaattcctg
    10501 aatggagtga gcaagaatac ctcatgcttt ctttacccca tgaaaaaagc gattggaatc
    10561 cctacttaga ggaaattttg caaagttata aagaatttgt aaaagtggta agtgaatttc
    10621 aaaaagtttt acttatagct cctaaacaga gtgattttga aaattttaaa gatataaaaa
    10681 atgtagagta ttttaaatgt gataccaatg atacttggat acgcgatttt ggagctatag
    10741 atatagtaga aaatggtcgt ttaaaagctc ttgattttac ttttaacgct tggggaaata
    10801 aatttcaaag tgagcttgat aatgctgtaa attctaagct ttttaaagaa aaatttaaag
    10861 aggagcttaa aaaggttgat tttattttag aaggaggaag tattgacttt aatggagagg
    10921 gtgtgatgct tacaagctct cattgtcttt taaatgaaaa tagaaattct catctaaaca
    10981 aaacccaaat tgatataaaa ttaaaagaaa tttttggttt aaaacaaatt atttggctag
    11041 aaaatggttt cataaaaggt gatgatacgg atcatcatat cgatacctta gcaagattta
    11101 tagataaaaa taccatagca cattgtattt gtgaagatga agaggatgag cattatttgc
    11161 ctttgcaaaa aatgaaagaa gagcttaaaa aaacaggctt tgatttagta gaacttccta
    11221 tacctaagcc tttatactat gaaggaagaa gattgggcgc aacttatgcg aattttgttt
    11281 ttataaataa tgctttaatt gtgccttttt ataaggataa aaatgatgaa atcatagcta
    11341 aaagactttc taaagcttta cctagtcata aaattatagg agtagatgca agagtgtttt
    11401 tacgacaaaa cggttctttg cattgttctt gtcaaaatcg tttcaaaggt ttaagatgag
    11461 tttgcaaaaa aaagcaactc ttgtagcaag tttatgtgcc attgttttag ccttggttaa
    11521 atttatagta ggcttaacaa gtggttctgt tgcagtactt tcaagtgcga ttgattcttt
    11581 aatggatttt gctatttctg cttttaattt tttggctctt aaaaaaagct cacaaaaggc
    11641 gaatgaaaat tataattttg gtttttctaa aattgaagct ttaatgggtt tgttagaagg
    11701 tgtttttata gttggcgtgg ggatttttat tttttatgag agtattttaa agatttatta
    11761 taaagaagaa attaaagatt taaattcaag catctatgtg atgatttttg ctttaattat
    11821 gacttttttt cttgtacttt ttttaaatta tgtagctaaa aaaaccaaaa gtttgattat
    11881 agaaagtgat gctttgcatt acaaaacaga ttgcttaacc aatgcttgta ctttaggggc
    11941 tttggttttg atttatttta caaatttaca tattattgat gctatttttg ggatagtgat
    12001 cagtctttat acggcatttt ctgcttttaa aatcattaaa aaagctttag cttttttaat
    12061 ggatgaggct ttacctaagg aacaagtgga taaaatttgt actttgattt ctaataatcc
    12121 tgaaataatt tcctatcatg aattaaagac gcgtaaaact ccaagttgta attatttaag
    12181 cgtgcatttg gttttttgcc ctataatttc gcttttaaat gcgcataaaa tttcagatga
    12241 aatagaagaa ggtgtgcgta agatgtttga aaatgaaaaa tgggatatac aaattcattt
    12301 agatccttat gatgatgcag aacaagaaag gcaaagacaa tgaaaatcgc tttaatacaa
    12361 caaaaatttc atttaaataa agaacaaact ataaaaaaaa cttgcgaatt tatagaagaa
    12421 gcctctaaac aaggagctga gcttgtttgc ttaggagaac ttcatcaaag tgagtatttt
    12481 tgtcaaagtg aaaatgtgga tttttttgac tatgctaatg attatgaaaa agatgtgaaa
    12541 ttttgggcaa atatagctag aaaaaatcaa atagtgctta ttgcttcatt gtttgaaaaa
    12601 cgaagtgccg gactttatca taatactgca gtggtttttg aaaaagatgg ttctatagca
    12661 ggcaaatatc gcaaaatgca catacccgat gatccttgtt tttatgaaaa attttatttt
    12721 actcctggag atttgggttt tgaacctata aatacaagtt taggtaagct tggagtgctt
    12781 atttgttggg atcagtggta tcctgaagca gcaagaatta tggctttaaa aggagctgag
    12841 attcttattt atcccacggc aattggttgg tttaataagg ataaagatga agaaaaacaa
    12901 agacagctca atgcttggct tggcgtacaa aaaggacatg ctatagctaa tggtttatat
    12961 gtagtagcta tcaatagggt aggttttgaa aaagatgtaa gcggggtaga agagggcatt
    13021 agattttggg gaaattcttt tgtttttggc cctcaaggtg aagaactttg tcttttagat
    13081 tctcaaaacg aatgtgtaaa aatcatagaa atagataaaa aaagaagtga aaatgtgcgt
    13141 cgttggtggc cttttttgcg agatagacgc atagaatatt ttgcagattt aactaaaaga
    13201 tttattgatt aaatcaataa atcttatttg ttttgtatat tttcaagata gctttttatt
    13261 tgctcttttt cttgttcgtt taaatttata aaacttattt ctttaagtct tgataaaagc
    13321 aaattatctt ctaaaatttc attttttcct atttctaaag aagtgatgac gctagaactt
    13381 atgagaagtc tttgggttgc atcttttctt aagccccata tattatgtat ggcaatatta
    13441 ttatctgtaa tttgtcctgc ataaagcata atatgtccag gtaaataaag taaactaaga
    13501 taagctttcc caaagcggtt taaaaaatct tttttttgag aattgctaag agtgcttata
    13561 tcaaaatgat taaaagaatt tttttgtgca gctgaatttc ttggtagata aagtccaaaa
    13621 gctgaaaaga tatcacgagt tagtaaagaa caatctcttt caaaattata accgccccag
    13681 ccataaggca aatttaaaac ttgtgaaagt tgatttttta aatttttatc attgaattgt
    13741 aaaggaaatt tagatacatc ttttttagaa attttatatt ttttagaacc tatttttcca
    13801 taaaaatagt ttttatcttc tttgtagtaa ggatagatag caccaattct actttcaaag
    13861 aaaaatttac catcctcgct atagatagca aatttttctt ttagtggtgt gataaagttg
    13921 agattttcat agattttcgc tctatcgttt gagaaaaatt ccaaattttt actttcaaca
    13981 aatccaaatc cagcttcacc taaaacaaaa gcataacgct tatctttact aaaatgtgaa
    14041 attaagacag gggctccagt atttaaaatg ccatcgcttg catagtcaaa aggaattcct
    14101 tcattttcaa aaaaaggatt ttttaagata gctctttggg ttggaagatt tttaatgatt
    14161 gtattttgga taatcaaagc tttttgatta agtttgccaa attcttggat atttgcgtta
    14221 tttatagcat ttttaaacca tgaaagcgga ataatttgtt tattgaaaaa ataataagta
    14281 ttttttgaat ttaaatataa aggaaaggac caaaaaatat tttgtccttt gtagttttta
    14341 aatgaatcat gccaagggtt aaagaaatat tttttatatc gttttgcatc aaaattaata
    14401 ttgtaagtaa attgtggtaa aatgcttaca ttttgttcgt attcaagttt tgcataatgt
    14461 tgattttcat ttttttgttc taaattttca tgatgaagcg aagttaaatt ttttgttgaa
    14521 caagctgtta aaaatagcac tataaaagta aaatataaac aagatttcat aatcaacctt
    14581 ttagaaaaaa tagttataat taaagctaag gaaatataat gcttgataaa ctagaaaaaa
    14641 ttttagctta tgataatgtt tttttaagtg gtggcgctgg agttggtaaa agctttttga
    14701 caaatgagct tatcaaatct tatagaaaac aaaaaaaatt agccatagct cttggttcta
    14761 gtgctctatc ggcgtttaat ataggcggtg ttactttaca cagctttttt tgtttagggt
    14821 attgtgatga tatgatgaaa ttaagcgcat tggatcgcaa tcaaaaacaa aaagaaaaat
    14881 taacaaaact taaagagctt ttaaaaacga ttgagcttat tattatcgat gaaatttcca
    14941 tggttagcgc aaatgttttt gaaatgatag gctttagact taaaaattct caatttaatg
    15001 gaaaaatttt agttgttgga gatttttttc aactgcctcc agtaattaaa gaaaaaaaag
    15061 aaactttatt taaccattct tattatgctt tttcttcatt tttttggcaa gatttaaatt
    15121 ttaagaatat taaactttct caacctaaaa gaacgcaaaa tatggaattt tataaccatt
    15181 tatctttgat tagacaaggt tttttagatg aaaaaatttt aagctttttt gaatctttgc
    15241 gaattgatta taaagaatta gaaaatttag aagatgatta tactttactt tgtggtatca
    15301 ataaaaaagt aaacaatatc aatcaagaaa aattaagcaa acttgagacc ccgcttgtat
    15361 gctttaaggc tcaggttaaa aaagaagata agagaataaa agatgaagag cttgattctt
    15421 ggattagaag cttaaatata ttggaagaat taaatattaa aataggcgct cgtattattt
    15481 tttgcgtaaa taattgggat aagaattatt ataatggaga gcaaggtatt atagaagata
    15541 ttctttatga agaggagaaa atttatatta gcattattaa aaataatggg atgaaaattt
    15601 tacttgaacc ttatactttt ttcatggaag aacttgagca atcaggtaaa gattttgttg
    15661 ttaatattct cgcaagtgtt acacaatttc ctattaaatt agcttatgct attactatac
    15721 acaaatcaca aggtatgagt attgaaaaat tagtgtgtga tattgatcat atttttgaaa
    15781 atggacagct ttatgtcgct ctttctcgcg ctacaaaccc aaatacttta aaaatttatt
    15841 ctacaaaaaa gataaatttt ggattttatt ttgctaatat tttaaaaata gattctaatg
    15901 tgattgaatt ttataaaaaa cataattttt tagatctcga aatacaagaa caaatcattt
    15961 aaaggcatta aatgaaaaaa atatttttaa gtgttttttt ggttttgagt ttaaatgctc
    16021 aaaatcttga aatagataaa ataagaacag atttgtattc taaaagtggg acaaatgttc
    16081 ttaaaaaagt cgaaatttct ttggaatttg atgggaataa tttaaaagaa aat
//
LOCUS       DARATF010000035        15946 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.035, whole genome shotgun sequence.
ACCESSION   DARATF010000035 DARATF010000000
VERSION     DARATF010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15946
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.035"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            62..2047
                     /locus_tag="SB502_000870"
     CDS             62..2047
                     /locus_tag="SB502_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEG0434329.1"
                     /translation="MLKQSIETYKKGDNLGAKKLSEDAYFQHFENMEGPIGRNIGRKT
                     ITMERKFVNLRRMYKDEAPLTQINALIDSLYYDLDEVAPILQNGYRLKAEASDINYDK
                     AKAEKSSLEANAKREADAEALIAQMMGVDKKDLAQSSLTTQAPIPVNNDTSKLIDDNA
                     STDLQAAAAMDVRLQFILDNISTKFSQAANAFKEKNYQTSKDFLNDALFSDYRNTKVE
                     ILVNKFTKAGNDQKIQQAIRTLIRQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSE
                     LSSLQISGFNDETKGKDYAKVSNDIKLALDEILKNYDGFSTSMVDDLQGIYLDIFEAS
                     GMENKIGAVDSGLKLKIESLFSKGMALIKASADKKELEATFNDLEQLIASSVDKIQDS
                     TPYSLFIWALGIILREGLEALIIIVAIVSYLVQSGNKNRLNIAYSALFTGVILSFITA
                     FGVSWLFKENAGQSRELIEGITMLIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAI
                     SNNSAKTLWITVFLAVYREGAETVLFYQALLFDAKTSTDFGAVFGGLGLGILILIVLY
                     FLLKAGAIRIPVKQFFYITSYIIFYMVFVFTGKGIAELIEGKVIIPGLIPMNFEPILW
                     LGIYPYYETLIPQFIVLIMLIIGILITKQISKKGVKS"
     gene            2044..2583
                     /locus_tag="SB502_000871"
     CDS             2044..2583
                     /locus_tag="SB502_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HEG0434330.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            2666..4069
                     /locus_tag="SB502_000872"
     CDS             2666..4069
                     /locus_tag="SB502_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HEG0434331.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPNKKYIFKSFLVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHY
                     YFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL
                     ILIESDKALANILLTLMRNSIIETHAFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSL
                     KIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVISFCIVLYFFMVSSKPLTI
                     DEPKEILPDKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDKDSPVAVFD
                     ACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDV
                     IAGSNYFSQIKEIEVQDPVSKTKVINTQAPFSYSYKGIAYYFSNQNNYEEFKKDPTKY
                     VEENEAQFLIQRRNDVG"
     gene            4056..5348
                     /locus_tag="SB502_000873"
     CDS             4056..5348
                     /locus_tag="SB502_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434332.1"
                     /translation="MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKD
                     DSNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNL
                     AQDLLNKQGLYSSAEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVDSIASQ
                     ISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIA
                     FVALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            5338..6456
                     /locus_tag="SB502_000874"
     CDS             5338..6456
                     /locus_tag="SB502_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEG0434333.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDIKLSKELKAYGANVMISPKQDENFISNTEYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKAGNELQIYNP
                     NNGKSIKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            6453..7106
                     /locus_tag="SB502_000875"
     CDS             6453..7106
                     /locus_tag="SB502_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434334.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            7103..7591
                     /locus_tag="SB502_000876"
     CDS             7103..7591
                     /locus_tag="SB502_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0434335.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            7552..8055
                     /gene="traF"
                     /locus_tag="SB502_000877"
     CDS             7552..8055
                     /gene="traF"
                     /locus_tag="SB502_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HEG0434336.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKA
                     WADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(8065..8502)
                     /locus_tag="SB502_000878"
     CDS             complement(8065..8502)
                     /locus_tag="SB502_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEG0434337.1"
                     /translation="MKKTILTILFLLTLTQAKEIQIYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGI
                     SALGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(8801..9217)
                     /locus_tag="SB502_000879"
     CDS             complement(8801..9217)
                     /locus_tag="SB502_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434338.1"
                     /translation="MKKLGLVLAVLVALNVSAFADLIVINKKDLVPVSASEMQNKYFQ
                     ESIKSTLTEPLFKKATFYEADIVAKVDPRTYNSTQAIIQKEYSDKSNYVYYKQVLILT
                     SDGKRARLSTLSCEIASFDKKGYLCGGTADHNYSIK"
     gene            complement(9392..9476)
                     /locus_tag="SB502_000880"
     tRNA            complement(9392..9476)
                     /locus_tag="SB502_000880"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9440..9442),aa:Leu,seq:tag)
     gene            complement(9481..9557)
                     /locus_tag="SB502_000881"
     tRNA            complement(9481..9557)
                     /locus_tag="SB502_000881"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9521..9523),aa:Arg,seq:tct)
     gene            complement(9572..9648)
                     /locus_tag="SB502_000882"
     tRNA            complement(9572..9648)
                     /locus_tag="SB502_000882"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9612..9614),aa:Arg,seq:tcg)
     gene            complement(9652..9728)
                     /locus_tag="SB502_000883"
     tRNA            complement(9652..9728)
                     /locus_tag="SB502_000883"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9692..9694),aa:His,seq:gtg)
     gene            complement(9753..9830)
                     /locus_tag="SB502_000884"
     tRNA            complement(9753..9830)
                     /locus_tag="SB502_000884"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9793..9795),aa:Pro,seq:tgg)
     gene            complement(9873..10721)
                     /locus_tag="SB502_000885"
     CDS             complement(9873..10721)
                     /locus_tag="SB502_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEG0434339.1"
                     /translation="MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIISQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNATKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(10721..11383)
                     /gene="cgpA"
                     /locus_tag="SB502_000886"
     CDS             complement(10721..11383)
                     /gene="cgpA"
                     /locus_tag="SB502_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HEG0434340.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(11373..11576)
                     /locus_tag="SB502_000887"
     CDS             complement(11373..11576)
                     /locus_tag="SB502_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434341.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(11642..12886)
                     /gene="eno"
                     /locus_tag="SB502_000888"
     CDS             complement(11642..12886)
                     /gene="eno"
                     /locus_tag="SB502_000888"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEG0434342.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIEFESDEYLGEKL"
     gene            complement(12886..13917)
                     /gene="recA"
                     /locus_tag="SB502_000889"
     CDS             complement(12886..13917)
                     /gene="recA"
                     /locus_tag="SB502_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEG0434343.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            14023..14883
                     /locus_tag="SB502_000890"
     CDS             14023..14883
                     /locus_tag="SB502_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HEG0434344.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILDFDQSLYVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLME
                     RKLIRVDEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDFLI
                     PSEYEEARNS"
     gene            14895..15164
                     /gene="fliQ"
                     /locus_tag="SB502_000891"
     CDS             14895..15164
                     /gene="fliQ"
                     /locus_tag="SB502_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEG0434345.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            15161..15937
                     /locus_tag="SB502_000892"
     CDS             15161..15937
                     /locus_tag="SB502_000892"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEG0434346.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLVSPK
                     PKNIGILGDGFNFIQILDQNKDFIHLRIGCKTKSSKIYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATSQGEILRENINFDYRFCPLNMPFFWAEFKLNFG
                     FDTLKDEALKNARSNQPNGASFGSIFKNPKNDFAGRLIEAVGLKGFNKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIKLARKKVFEEFGINLENEVIII"
BASE COUNT         5354 a         2597 c         2519 g         5476 t
ORIGIN      
        1 atcaagctca gcttttgcta gggtagatga ttatattaat gaagcaaatc ttatcaaaga
       61 tatgctaaaa caaagcatag aaacttataa aaagggcgat aatctaggcg ccaaaaagct
      121 tagcgaagat gcgtattttc aacattttga aaatatggaa ggcccaatag gaagaaacat
      181 aggaagaaaa actatcacta tggaacgtaa atttgtaaat ttgcgtcgca tgtataaaga
      241 tgaagctcct ttaacacaaa ttaatgcttt aattgatagt ctttattatg atcttgatga
      301 agtagctccg attttacaaa atggatatcg tttaaaagca gaagcaagcg atataaacta
      361 tgataaggct aaagctgaaa aatcaagcct agaagccaat gccaaacgcg aagctgatgc
      421 agaagcttta atcgcacaaa tgatgggtgt agataaaaaa gatttagcac aaagctcttt
      481 aaccacccaa gctcctatac ctgtaaataa tgatacaagc aaacttatag atgataatgc
      541 aagcactgat ttacaagctg ccgctgcaat ggacgtaaga ttgcaattta tactagataa
      601 tatctctacc aaattttcac aggcagctaa tgcttttaaa gaaaaaaact accaaactag
      661 taaagatttt ttaaatgatg ccttatttag tgattatcgc aataccaaag tagaaatttt
      721 agtaaataaa tttaccaaag caggaaacga tcaaaaaatt caacaagcca tacgcaccct
      781 tatacgccaa atcaacgatg caaaaataga tgaaaaaggc ttaagagatg gcttagataa
      841 catagaagaa caaatttttg atgttttctt acaaattcca aattcagaac tttcaagttt
      901 gcaaatttca ggctttaatg atgaaacaaa aggcaaagat tatgccaaag tttctaatga
      961 tatcaaactt gctttagatg aaattttaaa aaattatgat ggctttagca cttctatggt
     1021 agatgattta caaggaattt atctagatat ttttgaagca agcggtatgg aaaataaaat
     1081 cggtgctgta gatagtggct taaaacttaa aatagaaagt ttattttcca aaggcatggc
     1141 actgattaaa gcaagtgcag ataaaaaaga gcttgaagct acttttaatg acttagaaca
     1201 actcatagcc agcagcgtgg ataaaattca agattctact ccttattcgc tgtttatatg
     1261 ggctttaggt attattttgc gtgaaggctt ggaagctttg attatcattg tagccattgt
     1321 ttcttatctt gtgcaaagtg gcaacaaaaa tcgtctaaat atcgcctata gtgctctttt
     1381 tacaggagtg attttaagtt ttattaccgc ttttggagtt tcttggctat ttaaagaaaa
     1441 tgcaggtcaa agtagagagc ttatagaagg tattaccatg cttatagccg tattactact
     1501 cttttatgtg ggcttttggc tactttcaaa cgcacaaaat aaaaaatgga caagctttat
     1561 caaacaaggt gctatagatg ctatatcaaa taatagcgca aaaacccttt ggattaccgt
     1621 atttttagct gtttatagag aaggtgcaga aactgtgctt ttttatcaag ccttgctttt
     1681 tgatgctaaa acaagcactg attttggtgc tgtttttggc ggacttggac ttggaatttt
     1741 aatacttatt gttttatatt ttcttttaaa agcaggagcc attcgcatac ctgtaaaaca
     1801 atttttctat atcacttctt acattatttt ttacatggtt tttgttttta caggcaaagg
     1861 catagccgaa ctcatagaag gaaaagtcat cattcctggt cttataccta tgaattttga
     1921 accgatttta tggcttggaa tttatcctta ctatgaaact ttaatccctc aatttatagt
     1981 tttaattatg ctaattattg gcattttaat aacaaaacaa atttcaaaaa aaggagtaaa
     2041 atcatgataa aaaaagtttt atcagtagtt gctgcagctg cggttattag tacaaattta
     2101 tttgcgggcg aagtgccgat cggcgatcca aaagaactta atggcatgga aatagccgct
     2161 gtttatttac aacctattga aatggagcca agaggtattg atttagctgc atctttagca
     2221 gatattcacc tagaagctga cattcacgca cttaaaaaca atccaaatgg ttttccagaa
     2281 ggtttttgga tgccttattt aactatagct tatgaactta aaaataccga cacaggtgca
     2341 attaaacgtg gaactttgat gcctatggtg gctgatgatg gtcctcacta tggtgcaaat
     2401 attgctatgg aaaaagataa aaaaggtggc tttggcgtag gaaattatga acttactttt
     2461 tatatctcaa atccagaaaa acaaggtttt ggacgccatg ttgatgaaga aacaggtgtg
     2521 ggtaagtggt ttgaaccttt taaagtagat tataaattca aatacacagg cacgccaaaa
     2581 taattttacg ctcggatttt ccgagtgttt gaatattttt atttttattt gaaaaattaa
     2641 aataaaaatg tttaaagagt aaattatgag tatatatttt gtgcattttc ttatcagtgt
     2701 tttaccgcta agtattttaa tggcctttat cactcctaat aaaaaatata tttttaaaag
     2761 ttttttagta gtttttttgg gctttttatt tggatatttt gcttttttta tcgcagcaca
     2821 atttttaaaa accgaaaatt taatctttaa ttttgatttt gtttttatag gtttattgct
     2881 agtaagcttt atattttatt tttggaaaaa aattgaaatt ttaaatttta ttttattggg
     2941 aattttaagt ttttgcaccg ctttgcatta ttatttttta agtcaagatt tccctatttt
     3001 tactagctct ttaatcgata gcgaaggtat aagttcttta ggttttattg ctttagcctt
     3061 gcttgtttgt attttgattt tcttcttttt aaaatggcaa aaaaatttta atcaaaaaac
     3121 aagctttatg ctgtttttac tgcttatcct tatagaaagc gataaagctc tagccaatat
     3181 cttgcttact ttaatgcgaa attccatcat agaaactcat gcttttttgg tgagttttgt
     3241 aggaaaaagt aattattttg gtgtttttgg aatttatgtt tatttaattt tcatcacttt
     3301 tttagcattc ttaagcttaa aaattcgcaa aaaaaatata agcaaaaaac aaattttaga
     3361 tataaattat cgcaaaaacg aagctaaaac aagtcttatt aatcgctatt tttccagtgt
     3421 ttttatctcc tgtgttataa gtttttgcat tgttttatac ttttttatgg taagctctaa
     3481 gcctttaacc atagatgagc ctaaagaaat tttacccgat aagaatggca aatttatctt
     3541 tgatatagct cttttaaggg ataacaaact ccaccgcttt gcttatatca gtgctgaagg
     3601 caaagtgata aggttttttc ttatcaacaa aagagaagat aaggattctc ctgtagctgt
     3661 ttttgatgct tgtatgattt gtggagatat gggctatatc aaaaaagatg gacaactcat
     3721 ttgcatttct tgcaatgtgc gtattttctt gccaagtgta ggtaaaagcg ggggttgcaa
     3781 tcctatccca ctcaaatacg aatacgatgg taaaaaaatc accatagatg ttaaagatgt
     3841 aatagcagga tctaattatt ttagtcaaat caaagaaatt gaagtgcaag atcctgtatc
     3901 aaaaacaaag gttataaaca cccaagctcc tttttcttat agctataaag ggattgctta
     3961 ttatttttca aatcaaaaca actatgaaga atttaaaaaa gatcctacaa aatatgtaga
     4021 agaaaacgaa gcccaatttt taatccaaag gagaaatgat gttggctaaa atgattttta
     4081 actctatatt taaaaacaaa attcaaaaat ttttagcctt tcttacttgt tttttagcca
     4141 cgcttttgct ctctactatg ctaaatatta ccctaagtat aggtgatgaa gtaactaaac
     4201 aactcaaaag ctatggctct aatatccttg ttttacccaa aggctcaagc cttagtatag
     4261 aaataggtaa tgaactttat gaacccttaa aaaacaaaaa ctatctagaa gaaaaaaatt
     4321 tatatatgat taaagacatt tattggcgta acaacatcac cgcacttgct ccttttttgg
     4381 aaggtaaaat cacaattgaa aactcccaac aaaaagcact tatttatggt acttattttc
     4441 aaaaagccat aaaaattaaa gatgatgatg attttatcac aggtataaaa agtctttatc
     4501 cttatttagc agtgcaagga gaatgggcaa aagatgatag taatgaaatc atgctaggcg
     4561 aagactttgc taaaaacaat aaactaaaat taggagatac tatcaaactc ataggagaaa
     4621 acaatcaaag caaagaagca aaaatcgtag gcattttact tcatgccaat cctaaaatgt
     4681 caaataaaat catcgctcct ttaaatttag ctcaagattt actcaacaaa caagggcttt
     4741 actcaagtgc agaagtaaga gcttttacca tacctgaatc agccctttct gaaaaagtac
     4801 gtcgcatggg cgaagaaaaa ttagatcagt tagaatatga caaatggtat tgctcagctt
     4861 atgtagactc aatcgctagt caaattagcg atggcttgcc aggtgctgat gcaaaagctc
     4921 taaatgctat aagcgatgct caaagcttgg tggttaaaaa gatccaatcc ttaatgggca
     4981 ttacttgcat tatttgtctt attgttgcaa gtattgcgat ttcaagtcta atgagttctg
     5041 aaattcatcg tagaaaaaaa gaaataggac ttttaaaagt acttggtgct aatacttttc
     5101 aaatttatct catctttgct agtgaaaatt taatcgtagc tttatttgct gctttatttg
     5161 gatttatttt tggcacagca ctttctcaaa tcatcagtct tagtattttt ggatatttta
     5221 ttgatatagc ctttgtagct ttacctttaa gctttatttt tgcaggactt attgccttac
     5281 ttggttgctt gcttcctatc aaaaatatca cacaactttc agctgcagga gtgctttatg
     5341 gtagataagt ttttcctcaa tgagcttttt aaaagcatta gcttttctta tcaaagactt
     5401 tttattatag ttttaagtgt ttttatagga gcacttactt gctcagcttt tttaaatatt
     5461 tattttgata tcgacatcaa actttctaaa gaattaaaag cttatggagc aaatgtaatg
     5521 ataagtccca agcaggatga aaattttatc tccaatactg agtatgaaaa aataaaagaa
     5581 aatttaaagg ctagagcttt aactcctttt ttgtatgatt ttttaaattt aggcagtaca
     5641 agcggggtgg ttttaggcac tgattttagg gctttaaaaa tcactaaacc ttttttagaa
     5701 gttaaagaag gaagcttttc tctaaatgat tttgatgaaa attcagcctt tttaggagtt
     5761 aatttagcca agcaactagg cctaaaagca ggcaatgaac ttcaaattta taatccaaac
     5821 aacggaaaaa gcataaaact taccataaaa ggcatacttt caagcaatga tgaatttgat
     5881 agcattgttt tagccccttt aagcgtggtg caaaatttaa gcgatagagc cggtattaac
     5941 tatgctaatg ctgtagttta tggaaatttt gatgaagtta aagccaaaac acaagcaatc
     6001 agcaatgaat tcatcgatgc aaaacctata tcttcagtat ccttaagtga aggtttagtg
     6061 cttggaaaaa tcaaagcttt aatgttttta atcatacttg tggtattgat catagttact
     6121 actagtgtta atacaacttt aagttctatt atattttctc gcaaaaaaga aatcgcactg
     6181 cgtttagcct tgggtgcgaa aaaaagtgaa atttttaaac tttttgctag tgaatgcttt
     6241 atagtaagtt tttttgctag tttaatcgga gctttttgtg ggatattttt agccaatgtc
     6301 tttggttatt taatttttaa ttctagtatt gattttagat ttatagctgt ttttatagcc
     6361 ttaatcattt ctttgatttt tgcctttttg gctgcatttt ttcctataaa aagagcatta
     6421 aaaatcaatg tgtgtgaaaa tttgaaaggt gaatgatgaa aaaagaactt attaaaataa
     6481 acaatttaaa taaagaattt ggcaaagtta aagccttaaa caatatcaac ttaagcgtct
     6541 atgaaggaga atggcttgcc atcatgggtc catcaggaag tggaaaatca acacttttaa
     6601 acatactatc gctcatggat actccaagct ctggagagta tatcttggat aatgaaaacc
     6661 tagagcaaat ggatgaagag caaaaaatca ccttgcgtcg tgaaaaaata gggcttgtct
     6721 ttcaacaatt tcatcttatc ccctatctta acgccttaga aaatgttatg ctctctcagt
     6781 attatcactc aagtgtagat gaagaagatg ccaaaatggt tcttgaaaaa gtaggacttt
     6841 cgcatagact cactcattta cctagccaat taagtggcgg agaacaacaa agagtttgta
     6901 tagcaagagc tttaatcaac aacccagagc ttttactcgc agatgaaccc acaggaaatt
     6961 tagatgaagc caatgaacaa atcgttcttc aaaccttgca aaaattaaaa aatgaaggta
     7021 aaaccatagt tttaatcaca cacaatcctg atttagccaa attcgcagat cgaaccctta
     7081 tcttacaaca tggggtgtta aaatgaaaaa aagcctttta atcttaagta ttttgttttt
     7141 actcaatgct tgttcttttg aaaattcaaa agatactgga aaagttggag aaaaaagcgc
     7201 tgaaatttca gctaaagata ctttaggaaa agctgtaaaa cttgctgatg ataatacaag
     7261 tttaaaagtc ttagtctttt ttcaaaatgg ctgcccttct tgcttaaaag aactcccttc
     7321 tttagatgaa ttcatacaaa atcaccccaa taaaatcagt gtttatgcta taaattccat
     7381 cgataatgcc aatgtggtta aggttttagc cgaacaattt gactttaaaa atgtaaaagt
     7441 tttaaaagac gatcttaaaa tcaccaatga tcgttacgct gtgtttgcaa cccctactac
     7501 catcatcatt aaagatggga tgataaaaga tagaatttta ggagaaaaac catgggaatt
     7561 tttcgaatcc aagcttattt ctttgcttta atcatagctt tattttttgt agcttgtgat
     7621 agtggagaaa attttaaagc tttaaatagc gataaaacct ataattttgc ctacaatggt
     7681 tttgaaaaaa gcctaaaact aaatgataaa gcacaaaatt ttgccttagt atttttcaca
     7741 aaagattgcg gagtttgcaa agaacaaatt cctattttac agaatttggc taaaaattat
     7801 gattttaata tctttgtggt tttaggcgat gcaaacgatg caaacgatgc aaaagcttgg
     7861 gctgatgaaa aaggtttatc taatttagca atgttttatg aaaaaagagc agctaaatac
     7921 ctttcaagtg ccattgggga aatatatgga gtacctgtgc ttagtttttt caaagaagga
     7981 aaaatggatg aaaaattcat aggcttaact ccttatagca tacttgaaaa agaaatcaaa
     8041 aaagtaaaaa gctaaaaatt tactttaaag ctttttatcc cctataaaat atccataaag
     8101 ctcatagctt ccatcttttt tcatcaaaat tacaggatat ttttcactat aaccttgttc
     8161 cattcctgga cttccttgcg gcatgccaag agctgaaatt cctataacat ctttaggttt
     8221 gttttcaagc aaccatgcta tagcactttc aggaacatgc ccttcaatag catagccttc
     8281 aatcacacct gtatggcaac tttgatactc atcttttata cccatttttt ctttgatttt
     8341 aagaaaatca ttggttttat gaacactaac ctcataaccc ttagctttca tataatcagc
     8401 ccaaagatca caacagccac aagtaggact ttcataaatt tgtatttcct tagcctgcgt
     8461 aagagtgagt aaaaaaagaa tggttaaaat tgtttttttc ataattgcta tcctaagtaa
     8521 aaaatatata ataatacttt tataaagtta atatcatcac atttttaaca ctaaaaatga
     8581 atttacaaaa atttaatcaa gaaaagactt ttaatgagtg ttgattttgt ctttgcagca
     8641 aagatataaa agataaaacg atttaaaaaa ctagaaattt ttaacttaaa aagcttaaaa
     8701 tttagatata ttttatactt actatgtttt ttcatagtat gttctaatgg tggatttccg
     8761 ccaagagtga aaactcaagg cggattttta tttgcaatat ttacttaata gaataattat
     8821 gatcagctgt gcctccacat aaatacccct tcttatcaaa acttgcaatt tcgcaagaaa
     8881 gagtagataa tctagctctt ttaccatcac tagttaatat aagaacttgt ttataataaa
     8941 cataattgct tttatctgaa tattcttttt gtattatagc ttgagttgaa ttataagttc
     9001 ttggatcaac ttttgcaaca atatctgctt cataaaaagt tgccttttta aaaagtggct
     9061 cagttaaagt tgattttata ctctcttgga aatatttgtt ttgcatttcg cttgctgaaa
     9121 ctggaactaa atctttttta ttgataacta tcaaatctgc aaatgctgac acatttaaag
     9181 caactaaaac tgctaaaact aaacctaatt ttttcatttt atctccttga attgaatttt
     9241 gtatatttga attatttttc aaatcttttg caagataatt tttaaattta tctaaattaa
     9301 atttgcattt tatctaacaa tcataagaaa ttttaaaatg aaataaaaat ttatgagaaa
     9361 tcaactctta tttgaaaatg ataaaagtaa gtggtgcgga tgaaaggact tgaaccttca
     9421 cgcattgctg caccagatcc taagtctggc gtgtctgcca atttcaccac atccgcaaag
     9481 tggtacgccc aagaggattc gaacctctga cctacggctt agaaggccgt tgctctatcc
     9541 agctgagcta tgaacgcata taaaatcttg gtggtgcgcc cgataggaat cgaacccata
     9601 acctacagat ccgaagtctg tcgctctatc cagttgagct acgagcgcta gtggggtgag
     9661 tgatgggaat tgaacccacg accctcagga ccacaatctg atgctctaac cgactgagct
     9721 acactcacca ttttgtataa atttataaaa aatggtcggg gtgaaaggat tcgaaccttc
     9781 ggccccttgg tcccaaacca agtgcgctaa ccagactgcg ctacaccccg aataaataaa
     9841 aggaaatatt ttatcacaaa ataattttaa agtcaaggat tttcatctct tattcttaaa
     9901 aacaccggaa agcgaggtaa ggaatttttg gtcaatccat taaatttata agtcacaata
     9961 ctaccaattt ttggaggatt ttttctatct tcatctttta aaccactgcc tattttaatg
    10021 atttgtccat taggcatttt acaaagtaag gcacctactt gattttcaaa tttacccttg
    10081 cccttgcgaa atcctaccaa ctcacattct gcatcatcat agggttttaa tttcgtggca
    10141 tttttacttc tgcctttttc ataaggactt aaatttttgc gtataacaat accttcacct
    10201 tgatttttta taatgctttc gtaaaattga tttaaattat tttgattttc aactggaatt
    10261 tgagaaataa tttttatata ggcactagga tatttttgca aatactcttc taaaacagcc
    10321 aaacgatttt taagagtgca agtagaaatt tgaaattctt cgcaagcatt tggtacatca
    10381 aaaatattat aagttacttc cttccataag gtcaaattgc tatcgccact acgaattaaa
    10441 gctgaaattt catcaaattt atttcttgct atccaaagct caccatcaat agcaaaagga
    10501 gggaaatttt ttgtaaaaaa gtcaggagtt tttattttgt agttttggcg agtttttaga
    10561 tatttcccat cccaaattcc acgcactcca tcaagttttt cgctcatcaa ataagcatta
    10621 aaatctttag agttaaaatc ttgcttatcg aatttgctaa gaagtaaaat ttcattagca
    10681 aaaactaaac aagcacaaca tattaaaaaa acaaacctca tcaaagcaga ttaatcatat
    10741 atccagttgc atctttttga atattataat tataagttcc atcaagatat attacaagtc
    10801 gataatatcc tttatgagat ccaaagtcta tgcgtttaaa aatagaattg ctaaggcgta
    10861 tgttttttgt agggctaatc attttagatc taaaatctat aacgatttta cttggatttc
    10921 ctactgaaaa atctgtaatc atttcatcac tagtgttaag ttttatttta tttttataaa
    10981 ccgcataaga aataaaatca taaatctttg caacctgtaa aggtatttca acattggctg
    11041 ttgagtttga ttcttgttta gagctatttt tttcaggtat agtaactgaa acatcaagta
    11101 cttttgaagg atcagggctt ttaaatcttg atatagtata agtatcgtgc caatcaatac
    11161 ttttattgac atctaaatcg atcttatctt cacttccgtc taaattgata taattaaaag
    11221 tgatgctttt taaaattctt gcactagaat taaatttaac ttcctctttt tgaaattcag
    11281 gtggagcaac caaggttata ttttgatctg tcttgaaagg attttcatca gcatataaaa
    11341 gagaggtaaa aataaaaaat attgccaaaa ttctagtttt catttgggta taatcctttt
    11401 aattcaaaat aatctttttg tgctttagca ttttgttctt tgagcaaaat aatcttttta
    11461 ttaagctctt ctttggtatt ttctaagctt aataaagtat ctaaagaata ctgcccaaaa
    11521 aacatattgc caaaataaat cgctccaatt acaacaagaa aagcccaaaa aatcattttt
    11581 ataacatggg tataaaaact tttttttctt gtgctttcgt cgtattcttt aagtaaatcg
    11641 ctcagagctt ttctcctaaa tattcatcgc tttcaaattc aatttcaagt aagcgattgt
    11701 attttgcggt tctttcgcct cttgctaggg ctcctgtttt aatttgtcct gtatttaaag
    11761 ccacagcaaa atccgctata aaagcatctt cactttcgcc gcttctatga ctcatcacac
    11821 atttatagtt atttctttgc gctaaacgca cagttctcat agtttgggta atagttccga
    11881 tttgatttgg tttgataagt acagcatttg ccattttttt gatgatacct tctcttaaaa
    11941 tatcttcatt ggtcacaaac aaatcatcgc ctacaagctg aattttattg cctaattttt
    12001 cagtcagctt gatccagcct tcaaagtcat tttcagctaa gccatcttcg atactgcaaa
    12061 ttggatattt tgcacaaagt tctacatagc gttcgatcaa agcctcgctt gaaaaagcct
    12121 tgccttccat gtggtattta ccatctttga aaaattctgt acttgccaca tcaagagcaa
    12181 tttttacacg attttcataa cctgcttttt tgatacaagt cattaaaaga tcgataggtt
    12241 ctgtgttgtt agctaaattt ggagcaaaac cgccttcatc acctaaagcc gtagaatgtc
    12301 cagaatttgc gagttctttt tttaatatcg cataaatttc acaaactgaa cgcaaagctt
    12361 ctttaaagct agtaaaacca aaaggcatga tcataaattc ttgaaaatct acattgttgt
    12421 ttgcatgagc accgccattt atgatattac acattggcac gggtaaaatg ctcgcatttg
    12481 caccacctaa gtagcgatat aaaggcattc ccaaagcagc tgcagccgca cgagctgttg
    12541 ccatagatac gcctaaagtc gcatttgcac ctaaatttga gtaattattt gttccatcga
    12601 gctcacgcaa agtatcatca agttgagttt gattaaaagc atctagtcct aaaatttcat
    12661 ctgcaatggt ctcattgaca tttgcaacag cttttaaaac gccttttccg ccaaatcttt
    12721 catcattatc acgcaattct aaggcttctt ttgaacctgt acttgcacca cttggaacta
    12781 tggccgcacc tacacttcca tcgcttagcg taacttcggc ttttacggtt ggatttcctc
    12841 tactatcaag aacttcatag gctctaacat cttcaattac taacattatt cttctccttc
    12901 gtcatcttcg ctaccgctga tcataccttc tattcccata gaattttgaa ttgcttttgt
    12961 gatttcatct gcaatttcag ggttttcttt taagaaagct tttgaatttt ctctaccttg
    13021 tccaagtttt ttatctttat aagaaaacca cgcaccactt ttatctacga tatcaagttt
    13081 tacaccataa tcgatcaatt caccttcacg gcttaaaccc tctccaaaca tcacatcaaa
    13141 ttcagcttgt ctgaatggag gagcaacttt atttttaact acttttactt taacgcggtt
    13201 tcctataggt tcttcgtttt gttttaaggt tgctactttt ctaacatcta aacgcacaga
    13261 agcataaaat tttaatgcat ttccacctgt tgtggtttca ggagtaccat aacccatagc
    13321 accgattttc atacgaattt ggttgataaa aattactgtg gtattcattt tatgaactat
    13381 acctgtaagt tttcttagag cttgagacat aagtcttgct tgaagtccta catgttgatc
    13441 gcccatatcg ccttcaattt ctgcttttgg ggtaagcgct gcaacgctat ctactacgat
    13501 aagatctact gcgccacttc ttgctatagt ttctacaatt tctaaggctt gttctccaaa
    13561 atcaggctga gaaacataca aatcatctgt atttacaccc aaatttttag catattttac
    13621 atcaagcgca tgttctgcat cgataaaagc acaaactcca cctgcttttt ggcattctgc
    13681 gataatatgt aaagttagag tggttttacc tgaactttca ggtccataaa tttctataat
    13741 tcttcctttt ggaacaccgc ctatacctaa agcaagatca agcccaactg aacctgtgcc
    13801 tatgctatcg atttgctcga cttctttatc ccctagtctt aaaatagtgc cttttccaaa
    13861 ggttttatct aaacttttta gggcagcgtc tagagatttt cttttattat catccataac
    13921 tttccttaaa aattctaaat ttttagttag aattctaaca aaataaaatt aaataatgat
    13981 ttattttgct agaattaaag caaagattta aaggaagcat agatgaaaaa aattactatt
    14041 gcacattctc ctgatgctga tgatattttt atgtatatgg caattaaatt tgggtggata
    14101 gggaatgatt ttgcttatga aaatacagct ttagatatac aaactttaaa tgaatttgcc
    14161 ttgaaaaatg aatttgatgc tacggctatt tcttttgggc tttatccttt aatcgcttct
    14221 gagtatgcac ttttacgcac agcagtgagt tttggtgaag gttatgggcc aaaactcatc
    14281 aagaaaaaag acacgcattt aaaaagaaat tttaaagtcg ctttgagtgg agcaaatacc
    14341 accaatgctt tgatttttcg catgaaatat cctgaagcaa gaattattta taagaatttt
    14401 ttagacattg aaaatgcggt tttaagtggc gaagtagatg cgggggtttt gatccatgaa
    14461 agcattttag attttgatca aagtctttac gtggaagcag aactttggga tatatggctt
    14521 gaatttgcta aagaaaattt gcctttgcct ttaggtggaa tggctttgcg tcgttcttta
    14581 cctttaagcg acgcgattaa gatcgaaaga gatttaacca atgctgtaaa aattgccgat
    14641 gcaaatcgta aaattttagc ccctatgctt atggaaagaa aacttatccg tgttgatgaa
    14701 gaaaaacttg atacttatct taatttatat gccaataaaa actctattag catgaatcaa
    14761 actcaacttt tagctgtaga tacgcttttt aaactaggat atgattataa attttatgat
    14821 aaaatcatac atgtaaatga ttttcttatc cctagcgaat acgaagaagc tagaaattct
    14881 taaaaaggat aaaaatggat gaaagtacct tagttgctct tggagtgcaa acctttaaaa
    14941 tcacactttt actttctttg cctatgcttt tagcaggact tattgcaggg cttgtgatca
    15001 gtatttttca agcaactaca cagattaacg aaatgacact ttcttttgtt cctaaaatca
    15061 tcttggttgt agttatttta atctttttaa tgccttggat gactacaact atgattgatt
    15121 ttactgagaa tatactaaat caaattccaa cttttatcaa atgatcattg attttaaaaa
    15181 atactcttct gtgcgtatag gaaatgaatt tgaagtttta gttttggatc aaatttgtga
    15241 ttttgatggt tttttaatag gtggtgcaaa caacctttta gttagtccaa aacctaaaaa
    15301 tataggaatt ttaggagatg gttttaattt tatacaaatt ttagatcaaa ataaagattt
    15361 tatacatctt cgcataggct gcaaaacaaa atcaagtaaa atatatcgct ttgctaaaga
    15421 aaataatctt aagggttttg agtatttaag caaaattcct ggcacacttg gtggtctttt
    15481 gaaaatgaat gcagggctta aaggagagtg tatcagtcaa aatttaatca aaattgctac
    15541 ttctcaaggc gaaattctaa gagaaaatat aaattttgat tatcgttttt gtcctttaaa
    15601 tatgcctttt ttttgggctg aatttaaact aaattttggc tttgataccc ttaaagatga
    15661 agctttaaaa aatgcaagaa gcaaccaacc taatggagca agctttggct ctatctttaa
    15721 aaatccaaaa aacgactttg caggacgttt aatcgaagct gtaggactta aaggatttaa
    15781 caagggagat gctatgttaa gcgataaaca cgcaaatttt ttaatcaata aaaaaaatgc
    15841 aagttttgaa gatgcgtttt ttcttatcaa attggctaga aaaaaagtct ttgaagaatt
    15901 tggcataaac ttagaaaatg aagtgattat tatctaaaaa tttttc
//
LOCUS       DARATF010000036        15912 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.036, whole genome shotgun sequence.
ACCESSION   DARATF010000036 DARATF010000000
VERSION     DARATF010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15912
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.036"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            110..499
                     /locus_tag="SB502_000893"
     CDS             110..499
                     /locus_tag="SB502_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HEG0434347.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGLLE
                     VFIFIVLLGVGFLYAYKKGAFAWQSIK"
     gene            481..984
                     /locus_tag="SB502_000894"
     CDS             481..984
                     /locus_tag="SB502_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEG0434348.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLV"
     gene            981..1775
                     /locus_tag="SB502_000895"
     CDS             981..1775
                     /locus_tag="SB502_000895"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEG0434349.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKEDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFVADKNGFEVF
                     YQLLNLEKRLRVRIKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            1777..3003
                     /gene="nuoD"
                     /locus_tag="SB502_000896"
     CDS             1777..3003
                     /gene="nuoD"
                     /locus_tag="SB502_000896"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEG0434350.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAMLYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            3000..3227
                     /locus_tag="SB502_000897"
     CDS             3000..3227
                     /locus_tag="SB502_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HEG0434351.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            3224..3916
                     /locus_tag="SB502_000898"
     CDS             3224..3916
                     /locus_tag="SB502_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434352.1"
                     /translation="MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKETKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSLKTKLCLDENLQGTIAFLNYENNG
                     FDFTPIRIKEAK"
     gene            3913..6375
                     /locus_tag="SB502_000899"
     CDS             3913..6375
                     /locus_tag="SB502_000899"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEG0434353.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKYWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPTNGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFKELVELFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDITKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDMGIAKYSKNFISHIHKNGDEEQILYFLLQKFSQDEGIK
                     THLAEFFVSENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKNNIEVQRSV
                     FAKNLGIDEDKLEDLLLKKANFTLVIGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDNNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKEFISPNFENLSLKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLGVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            6368..7366
                     /gene="nuoH"
                     /locus_tag="SB502_000900"
     CDS             6368..7366
                     /gene="nuoH"
                     /locus_tag="SB502_000900"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEG0434354.1"
                     /translation="MSDFAFFALETLIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFISLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVAII
                     SYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALTVLL"
     gene            7376..8017
                     /gene="nuoI"
                     /locus_tag="SB502_000901"
     CDS             7376..8017
                     /gene="nuoI"
                     /locus_tag="SB502_000901"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEG0434355.1"
                     /translation="MKNYYLVDEKRKTPVSTWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVGNYSINLGRCIYCGFCAEVCPELAIVHGIEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDANLWVKKTPNYYDVMQERALENQNTQEQGENK"
     gene            8014..8532
                     /locus_tag="SB502_000902"
     CDS             8014..8532
                     /locus_tag="SB502_000902"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEG0434356.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAIL
                     LLTMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     TLTHKELTKEKQ"
     gene            8529..8825
                     /gene="nuoK"
                     /locus_tag="SB502_000903"
     CDS             8529..8825
                     /gene="nuoK"
                     /locus_tag="SB502_000903"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEG0434357.1"
                     /translation="MIEKYFFVAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGVALCVLWYRRKGTLELKSLKEVEA"
     gene            8827..10617
                     /gene="nuoL"
                     /locus_tag="SB502_000904"
     CDS             8827..10617
                     /gene="nuoL"
                     /locus_tag="SB502_000904"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEG0434358.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSEKKQFVGIFCSLLVALSTF
                     CSLYLLFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSIVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVVRDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHDEHPNEASKIALLAMSPLM
                     VLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMICASVAAILGVILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPRFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQIIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            10619..12106
                     /locus_tag="SB502_000905"
     CDS             10619..12106
                     /locus_tag="SB502_000905"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEG0434359.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALVLMLLSSLMIFLSFLFLKLEQKALVSC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLVALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYANSPILVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIEGFSLRFREIVALVCIVVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            12096..13484
                     /locus_tag="SB502_000906"
     CDS             12096..13484
                     /locus_tag="SB502_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEG0434360.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLEAKAFLATLNNDIVSFYASLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIATRGSDNAISSAIK
                     YFSVAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIAFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHVLFMKNDRVHNIKFSFIQNFILAFC
                     VCVSTFAILLML"
     gene            13506..15872
                     /locus_tag="SB502_000907"
     CDS             13506..15872
                     /locus_tag="SB502_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HEG0434361.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQN
                     KLYTQDPSIRDQQILEKMIDDAKNWMRTFTSDKNFSEVLHIMLKTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLLNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFMYLDTLAKINKNEESLAVLTDLLKLKLSDKDKA
                     RALYIQALTYERMQNIQAEKESLKQCLEIKSVSNWQNLCKSKNQILNQ"
BASE COUNT         5048 a         1901 c         3012 g         5951 t
ORIGIN      
        1 atatttttta atataagttt caatatagaa agtttagagt aaaataaaga aaagtgtaaa
       61 tttaattttt gttgtggagt gattaaagtg ctttaaaaaa ggagaataaa tgtctcatat
      121 agatgcttcg catccttatt ttggtatttt tttaatgcta gtacttgcta gtgttatttt
      181 tttcggactg gtttttttag cttcaaaaat cggtaataat tttgccgcaa aaaatcgcaa
      241 aaaattagga cttggaattt atgaatgtgg tcctattcct gttaaacaag ctaacaagat
      301 taactctcaa tttttcatca tcgccttaat cttcatactt ttggatatag aagttgtgtt
      361 tttatttcct tgggctttga tttttaaaga tttaggttgg tttgggcttt tagaagtttt
      421 tatttttatc gtacttttag gagttggatt tttatatgct tataaaaaag gagcgtttgc
      481 atggcagagc atcaagtaaa ttatgcaagt ggtttgcccg tagttttaac tagtgttgat
      541 aaactagttc aatggggcag gagtaattct ttatgggctt tatcttatgg acttgcctgt
      601 tgtgcgattg agatgatggc ggctgggggt tcaagatatg attttgatag atttggaacg
      661 atttttagag cttcaccacg ccatagtgaa gtgatgatta tcgcaggaac tttatgtaaa
      721 aagcatgctg aatttacaag aagactttac gatcaaatgc ctgatcctaa atgggtgatt
      781 tctatgggaa gttgtgccaa tacaggcggt atgtttaata cttattctac ggttcaagga
      841 gtggatagaa ttatacctgt agatatttat gtgccaggct gtgctccacg ccccgaaagt
      901 tttcagtttg ctttgatgat tttgcaaaaa aagatccgca aagaaaaagc aagtcgtaaa
      961 atcgcaccta aaaggttggt ataatgagaa agtatagcga taaaaaaaat gctcaaactc
     1021 aaaattatta caaagataga ttttatcacg cgccacacac tgtaaaatct gatgttaatg
     1081 aaagtgtttt taaagaggat tttgaagttt taaaaactca agtagaaatt ttaaattcct
     1141 ttgtagagct tgatttttgg gtaatagaaa ttaaaaaaga agacaatgtt aaaaccttgc
     1201 aaatgcttaa aactttaggg tatttaagtt ttacagaggc aagtgctatt gattttgtag
     1261 cagataaaaa tggttttgaa gtgttttatc agcttttaaa tttagaaaaa agattaagag
     1321 tgagaataaa aacttttgta ggcgtaaaag agcgtttgca aagcgtggct catattttta
     1381 aaggagcaaa ttggagtgag agagaaattt atgatatgtt tggaattttc atcataaatc
     1441 atcccaattt aaaacgcatt ttaatgcctg atgattggtt tggacatccg cttttgaaaa
     1501 cttatccttt aaagggcgat gagtttgcaa gatggtatga gattgataaa atttttggca
     1561 aagaataccg cgaagtagtg ggcgaagaac aaagagattc tggttttgct gatgataaag
     1621 atacgctaaa ttttgcaaga ctttatcatg aagtgccaaa aggtggtcaa aagaaggaaa
     1681 tttcctttaa acaagaatat caagaagatg aaggcgtggc ttttgtaaaa aaagtaaaac
     1741 gtgatgaagc aaaaatttta gagaaaaggc gttaaaatgc aaattcctag caagttaaaa
     1801 ccttattatg aaaatatagc ttttgagcaa gaagactcaa aaatgattat caacttaggc
     1861 cctcaacacc cttcagcaca cggaaattta cgccttattt tagaacttga tggagagcaa
     1921 gttgtaaaag cgcgtccttg tataggttat atgcatcgtg gtatggaaaa aatggctgaa
     1981 aatatgattt atcaagagtt tattcctact actgatagaa tggattatat cgctgcttca
     2041 gcgaataatt atgcttattg tgcagcggtt gaaaagcttt gtggtttaga gattccacgc
     2101 cgtgccgcag tgatacgcat gatactttta gaattaaacc gtatcacatc acatttgctt
     2161 tggcttgcca ctcatgcgct tgatattggt gcgatgagtg tgtttttata ctgctttaga
     2221 gaacgtgagt atgttttgga tttgatagaa aagtattgtg gtgcaaggct tacgcattct
     2281 tctatgagaa taggtggggt tatgcttgat ttacctgaga attatttaga agaaatgctt
     2341 gcattttgcg ataaatttcc aaatgattta aaagattatg aagatctttt agatgataat
     2401 agaatttggc gtttaagaac tgaaaatgta ggtgtagtta ctaaagaaca agctttaaac
     2461 tggggttgta cgggtgtgat gctaagagga agtggcataa aatacgatat acgcaaagaa
     2521 gagccttatt tgctttataa tgaagtcgaa tttggcgtgc cttatgctac gcaaggggat
     2581 tcttatgcaa gatataaagt ttatatgcaa gaatttcgtg aaagtttgaa aatccttaga
     2641 caatgtgcca tgctttataa agatactcca cctgaaattt tagctacgca tcctgagtat
     2701 gtaagtgctt caaaggaaca aattttaacg cagaattatt ctttaatgca gcattttgtt
     2761 ttaatcactc aaggtttaaa accccctaaa ggcgaagttt atgtgcctac tgaaagtcca
     2821 aaaggtgagc ttggcttttt tatccatagt gatggtacag gaagacctta tcgtttaaag
     2881 gctagaacgc ctagttattg gcattgtgcg ttttttgaag aaatgcttgt aggtacttat
     2941 ttagctgatg ttgtagccat tatgggtaat gtaaatatag ttttaggtga gatagatcga
     3001 tgagaagggt agatttaaga aaaagcaaag agctttttga agatttagca caaatcataa
     3061 aagaagcaaa acaaggtgag gttttagtgg tgctttttga aatcggcgat ttttctcctg
     3121 ttgaaaaaag tttttctttt gtaaaagaac aaggctgtga gcttttaaat tctttgaaat
     3181 ttaatcaagt cgattggact attgttataa aaaaggagag agtatgattt atgataatgc
     3241 tctttgtttt ttagatatgc caagccttaa aaacaaaaat ttatgtgaaa aaataggtgt
     3301 aaatagtatt aatatttctt gtttggaaga taaaaactta aaagctaaat tttacaaatg
     3361 cgaaattgca agtttgagtt ttgttttggc cttgctttgt aaattaagcg atgaaggaca
     3421 attttgcgat ttagatgagg gatatttaag tgctgaatct tgttttggag aggaagaagc
     3481 aggcgaagtg cttgcttttt taaaagagac taagtattta attatagata aaaatatcca
     3541 ttcttataaa gatagtgaaa atatcaaata ttttttgaat ttcctaagtg taaaatatgg
     3601 attaaagatt ttagatagcg atgaagaaga atgcgatttt aaaaaggcaa aattaaacac
     3661 cctaaaagaa ctcgataatt atgacgggtt agtgcttttt agagcaaatt tgcaagataa
     3721 aaatttacat tgttcaaagc aatttttaca aattgcaaaa tgcaaagatc aaagtgaagt
     3781 tgaaattttg gctaaagatt ttagtcttaa aaccaagctt tgtttagatg aaaatttaca
     3841 aggcactata gcttttttaa attatgaaaa caatggtttt gattttactc caattcgcat
     3901 aaaggaagca aaatgacagt taagattaat ggtatagatt gcgcctttga agaaggcgaa
     3961 tatattttaa atatagcaag aagaaatgat atttttatcc cagcgatttg ctatctttcg
     4021 ggctgtagtc ctactttggc ttgtcgtatg tgtatggttg aagctgatgg taaaaaggta
     4081 tattcttgca atactaaagc aaaagagggc atggttgtag aaagtgattt acaaaatctt
     4141 tgggatgaaa gaaatgagat catgcaagct tattgtatca atcatccttt agaatgtgga
     4201 gtttgtgata aatcaggcga gtgtgaattg caaaatttca ctcataaaag tcgtgtaaat
     4261 gttcaaaaat attggattaa agacacgcat aaaccgcata aacattgggg aatgattaat
     4321 tacgatcccg cactttgcat agtatgtgag cgttgtatta cagtttgtaa ggataaaatc
     4381 ggagaaagtg ctttaaagac tgttcctcgt ggcggagata gtgtggataa tagctttaaa
     4441 gagagcatgg gaaaagatgc ttatgcgatt tggactaaat ttcaaaaaag tttgataggc
     4501 cctacaaatg gcgacacgct tgattgttca ttttgtggag aatgtacaag cgtatgccca
     4561 acaggagctt taataggttc gaaatttcaa tacacttcaa atatttggga acttaaaaga
     4621 atccctgctt caaatccaca ttcaagcgat tgcgagttga tgtattatga tattaagcaa
     4681 agcggcatta gcaatcaaaa agaaaaaatt tatcgtgtga gtaatgattt tgcctttgcg
     4741 agtttaaata aggctgcaag atttgctttt gatacgcaaa atgaggcgga taaagatgaa
     4801 aaagccttta aagaacttgt ggagcttttt gagaaaaatg aaattaaaaa cattaaattt
     4861 aatagtttta ttaccaatga agaagctttg attttacaaa atttaaaaaa gaaatttaat
     4921 ctttctttaa tcaatgaaga agctttgaaa tttaaagaat ttttacaaga atttatcgct
     4981 aattctggtg agttttatag cgctaatact caagatataa caaaaagtga ttttttggtt
     5041 gtggctggaa tgcttttaag atatgatgct ccaacgctta gttataaaat caataatgct
     5101 ttagtgatga ataaaggctc agggctttat tttcatccta tggaagatat gggtatagca
     5161 aaatattcta aaaattttat ctcgcacatt cataaaaatg gcgatgaaga gcaaatttta
     5221 tattttttac ttcaaaaatt tagccaagat gaaggtatca aaactcattt agcagagttt
     5281 tttgttagtg aaaataaaga aatagaagaa agtatcaacg aagaagttgt agaacaagtc
     5341 atagaaaaag atgaagaagg caatgaaatt caaaaagaag taaaaaaagt cgtgcctaag
     5401 aaagtgaaaa acaacataga agtacaacgc tctgtttttg ctaaaaattt aggcatagat
     5461 gaagataaat tagaagattt attgcttaaa aaagcaaatt ttactcttgt tatagggagt
     5521 gatttttatt ttcataaaaa tgcgaaaaaa cttgctaaat tacttgcttt gatccaaaat
     5581 accactcctt ttaaagtctt tttaaatcct acgcatacta ataccttagg tgtggctatg
     5641 atttgcgatt tggataacaa tacacaagaa ggcaagactt taggctacaa tgaaaaaggt
     5701 gattttagtt tttcttatga agagcatgca aatttagcta gtgcgagttt aaatcagcaa
     5761 gaaggaactt ttttaaatta tgataaaaga gtggtaccaa ctaacgctgc tttagaattt
     5821 aagggatatt ttttaaatga tttggctaat gctttaggtt ttgatgagga atatactata
     5881 aattatacta agagactccc tataaataaa ggtttttctc cgattgattt tgatcattta
     5941 gacaattttt ataccaatgc aggcgattgt aaaaggggat atgagcttaa tttagaatgt
     6001 ttcaaacaag ttgctaaaaa agaattcatc tctccaaatt ttgaaaattt aagcctaaaa
     6061 gaagatgaaa ttttgcttta tagtgctaat cctagctatc aatttggtag attttcaaat
     6121 cgtgctagtg cgattaatga ggtgattttt ttaggtgtaa gtgaaaattt agctaaagag
     6181 aaaaatttaa aagataaaga tcttgtaaaa cttaaaataa aagataaaga attaagcctt
     6241 agtgtgcgtg tggataagga tataaaaaat ggagctttct tgccgtattt tgatgaaaaa
     6301 cttgacacgc taagcttttt tgatgaaaga tttgttgtgg cgaatttaga aaaattagga
     6361 gcaaaccatg agtgattttg ctttttttgc tttagagact ttgattaaat gtattattat
     6421 cattgcaata tttgcgagtt tagcaggtct tgcaacttat gctgaaagaa aggttttagc
     6481 ttattttcaa agacgcatag ggcctgatat ggtagggcct tttgggctta ttcaacttgt
     6541 agctgatatg ataaagcttt ttactaaaga agatataatc ccttcaaatt cgcaaaaatt
     6601 tatttttgct atagcacctt tgatttctgc tatttgtgct tttatttctt tagcagctat
     6661 tcctatgcta cctgaattta ctttatttgg aagggttatt cagcctatag tggcagatat
     6721 caatgtagct ttgctttttg tcatcggtac ttcaggactt tgcttttatg cggtgttttt
     6781 gggtggactt gcaagtaata ataaatggtc gattttaggg gctgcaagag ggcttgtagc
     6841 gattatttcc tatgaaagcg taggagcttt agctttgatt gctattataa tgcttgtagg
     6901 ttctttttct ttggtggata ttaacaatta tcaaagcgat ggattttttt cttggcttat
     6961 ttttaaacaa cctttggctt ttgtgctttt tataattgct ttatttatag agactaatag
     7021 aactccgctt tgtttgacgg aaaatgatgc tgaaattgta gcgggttatg gaacggagta
     7081 ttcgggttta agatggggta tgtttttcat aggtgaatat acttctatga tagctggagc
     7141 tattttggtc actcttttgt ttttaggggg ttttaatagc ttttggatta ttcctggttg
     7201 gattatgatg atagtaaaat caagttttat tttcttttgg tatttttggg caagagctgc
     7261 ttttccgcaa ttgcgtccag atcaagtgat gaaaatgtgc tatttgatct taatcccttt
     7321 agctgtttta aaccttttaa tcactgcttt gacagttctt ttataggagt ttgatatgaa
     7381 aaattattat ttagtagatg agaaaagaaa aactcctgtt agcacttggg agaaaatttc
     7441 acaagctttg cgtagaagcg ttaaactaga gctttttgta gggctttttg tgatgatgag
     7501 agaattactt aagagaaata atagcgctac gattaaatat ccttttgaaa aggtaaagct
     7561 tgacaatcgt taccgtgctg ttcatcgttt gatgcgtttt atagaaagcg aaaatgaaag
     7621 atgtataggt tgtgggcttt gcgaaaaaat ttgcattagc aattgtatta gaatggaaac
     7681 ttctttagat gaaaatgggc gtaaaaaagt aggaaattat agtattaatt tagggcgttg
     7741 tatttattgt ggtttttgtg ctgaggtttg tcctgaactt gctatagtac atggaataga
     7801 gtatgaaaat gcagccgagc aaaggtctta ttttggctat aagcaagatt ttttaactcc
     7861 tattgataag cttaaaaatc aagttgaatt tgaaggagca ggaagtctta gaaaggatgc
     7921 aaatttgtgg gttaaaaaaa caccaaatta ttatgatgtg atgcaagaaa gagccttaga
     7981 aaatcaaaac acacaagagc aaggagaaaa taaatgatag aaaatttggc ttttgtattt
     8041 tttagtgtag tggttttagg cttttttggc attgcggttt taagtaaaaa tatgctttat
     8101 tctctttctg ctttagcggg tggaatggtg tttttatcgg gattttattt tttgcttgat
     8161 gcagagtttt taggcgtgat acaaattatt gtttatagtg gagctgtact tggactttat
     8221 agttttgcga tgatgttttt tgatgcttct aaagaattta aagaacaact taaagctaaa
     8281 aaaagttttt ttactttggt ggttttaagt gcgattttac ttttgactat gcttataggt
     8341 tttaaatacc aaaatatcag cacggatttg cctttaaatg atcctgcttt gtttgatttt
     8401 aataaacaac tggctttagc gattttttca aaatatcttt tagcttttga gtttatagct
     8461 attttgcttt tgatcgcttt agtttgtgct atcactctta ctcataaaga gcttacaaag
     8521 gaaaaacaat gatagaaaag tattttttcg ttgctatttt aatgtttgtc atagggcttg
     8581 tagggatttt aaaaagacaa aatctcatta tgctttttat ttcgagtgaa attttattaa
     8641 atagtgctaa tttagcctta gtagcggctt ctaaaatgca caatgattta aatggacagg
     8701 tttttgcact ttttatcatg ggtgtagcgg cttgtgaagt agctgttggt gtagctttgt
     8761 gcgtgctttg gtatagaaga aaaggcactt tggaattaaa aagcttaaaa gaagtggagg
     8821 cttagtatgc aaaatttggc tttgatttct ctttttagtc cttttgtagc ttttttgttt
     8881 gcaagttgtt ttgctttgag tgagaaaaaa caattcgtag ggatattttg ttcacttcta
     8941 gtagctttga gtactttttg ttctttgtat ttgctttttt gcaatgaagc ttttaatgtg
     9001 agtttgtttg aatggtttgc tggagtaaat tttggttttg atatagatgc tatttcgctt
     9061 actatgatga gtattgtagg tattgtagcc acttgtgtgc atttttatag tattttttat
     9121 atggctcatg atgaaggttt taataaattt tttgcttatt tggggctttt tgtcttttct
     9181 atgctttttt tagtcatgag tgataatttt ttaggacttt tcgtaggttg ggaaggcgtt
     9241 gggctttgct cttggttgct cataggtttt tggtataaaa atgatactta ttcttttgcg
     9301 gctaatgaag cttttattat gaatcgtatt gcggatttgg gtatgctttt aggaattttt
     9361 tggctttatt tgcaagcagg aactttaaaa tatgatgaag ttttttccat ggcacaaagc
     9421 ctagatcaca atgctttgat cttaatcgca acttgtttat ttataggggc tatgggaaaa
     9481 tctgcacaat ttccttttca cacttggctt gctgatgcta tggcagggcc aactcctgtt
     9541 tctgcattaa tccatgcagc aaccatggta acagcggggg tttatttggt aattcgtgcg
     9601 agtacgcttt atgatttagt tcctgaagtt tcttatatta ttgccttact cggagctttt
     9661 gtagcgattt ttgcagcctc tatggctttg gtggttaggg atttaaaacg tattattgct
     9721 tactctacct tatcgcaact tggatatatg tttgtggctg caggacttgg ggcttatggt
     9781 atagctttat ttcacttagc tacgcatgct ttttttaaat ctttactttt cttaggcgct
     9841 ggaaatgtaa tgcatgctat gaatgataaa ttagacatta aaaaaatggg tggacttttt
     9901 aaacctttaa aaattacagc tattttaatg tgtataggat ctttagcttt agcaggaatt
     9961 tatccttttg caggattttt ctctaaagat ttgattttgg gatattcttt catttctttt
    10021 caccatggta tttttttagt gcttttaatc gcagcttttt taacagcatt ttatagcttt
    10081 agacttttaa tgttggtatt ttttacccct gcaagacatg atgaacatcc gaatgaagca
    10141 agtaaaatag cactcttggc tatgagtcct ttgatggttt tagctattat tgcaggattt
    10201 tttgaacata gtttttttga atatttaagc acaaaattag tttttattga tgcacaaaat
    10261 caaattgtaa tgatttgtgc gagtgtagca gctattttgg gtgtaatttt ggctattttt
    10321 gcttataaaa attcttggtt taaggaaagt attgaagaaa ataaaattca caaactttta
    10381 agtaatgatt attttattcc tagattttat catcaattta tcgtttcaaa atatgaaagt
    10441 ttatgtgcga ttttaaagca ttgtgatctt tatatttttg atagaatagt tgaaaaaatt
    10501 gctttgtatt ctcaaattat ttcacaaaaa atgattatgc caaacagctt aaacttaatg
    10561 cttagatttt tggtggcagc ttttgtgatt ttgttgattt tggtatggat ggtgtaaaat
    10621 gctaaattat ttgatatttt ttcctttaat ttctgctttt gtggttttgc ttttaaatcg
    10681 tggaggcgtt aaggttttta gcgttgttgt aagttttatg attttggctt taaatttgga
    10741 tatttttgca gattttttac aaggggtaag ctttgattat aatctctctt ttaaaatttt
    10801 gaaatttttt agctttcatg taggagtaga cagtattgca cttgtattga tgcttttaag
    10861 ttctttgatg atatttttaa gctttttatt tttaaagctg gaacaaaaag cacttgtatc
    10921 ttgtatattc tttttagaat ttgctattat gggacttttt agtgcaaaag atggtttgtt
    10981 gttttatgtt ttttgggaat tttctctttt gcctttactt tatattatgg gagtttatgg
    11041 taaagatttt agagcagggg tgaaattttt tatctatgct tttgcgggtt caattttaat
    11101 gcttgtagca ttgatttatc aagcttattt aaattatcag cttttaaata tcttcacttt
    11161 tgacttggaa atttggaaaa ataatgcctc agcagtaaat tttacagagc aacttttact
    11221 ttttggagca ttttttatcg cttttgctat caaagctcct ttatttccac ttcatacttg
    11281 ggcacctaag gtttatgcaa attcgcctat acttgtttct gtaatgcttg tagtttttaa
    11341 aatggctcct tttggatttt tacttttttg tttaccactt tttccagatg cgagtgtgta
    11401 ttttatgcct ttaattgtag ctttatgtat agtaagtatc gtttataatg ctttaattgc
    11461 ttatagagca gaaaatatta aagaattgat tgcttatagt tctatttcac atcttggtgt
    11521 gatgattttg ggaatttttt ctttaaatgc tttgggtatt agtggtgcgg ttttttatat
    11581 gtttgcacat ggtattgtaa cgggagcttt atttttaatg gttgaacttt tataccaaag
    11641 atatcatact tatgatattt ctttttacca ttctttagcc aaaaaagcac ctttattttc
    11701 aattttcttt atgctcattt tacttgcgag tgtttctttg cctttaactg tttcttttgt
    11761 gggagagttt ttaattcttt taggtatagc aaagattaat ttattttacg ctttgttggc
    11821 aggtttggtg attattttag gagcgattta tatgttcgca gtatttagaa aaatattttt
    11881 catgcaaaaa caaagcttta tagagggttt ttctttacgt tttagagaaa tagtagcgct
    11941 tgtgtgcatt gtagtaatga tttttggact agggcttatg ccaaatatac ttttaaagcc
    12001 gatacaaaaa gatgtggata atcttataaa aacaatgaat attagagctg ttgagcaaaa
    12061 tactttagat tttttatcta aaataggaga ggcaaatgtt aaataatttt ttaaatttag
    12121 aacttttaaa tataagctta tcttatccat ttttattttt aattacaact gcaatagttc
    12181 ttttgctttg ctctggtttt tggaaatttc atcgatcgtt ttatatcggt ataagttctt
    12241 tatctttaat tgtaagtgct tttttgattt taaataatgc aaatgctcaa ggcttagaag
    12301 caaaagcttt tttggccact ttaaataatg atattgtttc attttatgct tctttggtaa
    12361 ttttgtgttt ttcattttta tatcttttaa tgcaaaaaga agaaaatcaa ggtgaatttt
    12421 atgctttatt tttatttatg attgcatctt tgcttttgat ggtttcaagc tcaaatttag
    12481 tacttatttt tataggactt gaaagttctt ctttagcgct ttatacttta atagcaacgc
    12541 gcggaagtga taatgctatt tcaagtgcga taaaatactt tagtgtagcg gctgtaggag
    12601 ctgggttttt tgttatggct gtagctttta tttatttaaa aacaggaact ttagatttat
    12661 ctgctaattt agcattaaaa aatgagtttc aaaaagatcc catgcttttg ggtgctggag
    12721 tgatgatttt tgttctttgt gcaatcaagc tttctttggc accttttcat ttttggctta
    12781 aagatgtgta ttatgcagca catacaaatt tggttgcttt tatttcagtt gtgccaaaag
    12841 ttgccatgtt ggttgtggtt attcgtttgt ttgatttttt aaataataca ggttttgaat
    12901 atatcataat agttctagcg attttttcta tgcttatagg tgcttttgcg gctctaagtc
    12961 aaaacaatat caaaaaaatg tttgcttata gttctgtagt gcattcttct ttggttttgg
    13021 tagcttgcat tcctttatta aaagaacaaa attttgatgg aattttgctt gctatttttg
    13081 gatattggac tttatttgct tttgcaaatt atgctgtatt tatgatttta agcaattatg
    13141 agaataattc ttatgagagt ttaaatgggc ttttggttaa aaaaccttta attgcttttt
    13201 gtttaagcat tagtgtgctt tctttagcag gtatcccgcc ttttggagtg ttttggggta
    13261 aatttatgat tttaaataca gcaattttaa atggatattg gtatttggcg ctttttgtgg
    13321 ctttatcttc tgttattatg ctttatgcgt atttaaagat tttaattcat gttttattta
    13381 tgaaaaatga tagggttcat aatattaagt ttagttttat acaaaatttt attttagctt
    13441 tttgtgtttg tgtaagcact tttgctatat tgttaatgtt ataagagttt tgctataatt
    13501 attttatgag aatattattt ttaattttat taagtttttt aaatgctttt gcttttgagc
    13561 ttgttttaaa cacgggtcgc gaaaataatc aagcttttgc agttttacat gcgagtaatg
    13621 atttagaatt tacatgtcaa aaatttatta ccgaagcaaa agttcatttt gaatgtgata
    13681 ttgcaggtat ggttgataat aaattaaaag atcagagttt ttctgctttt gatttaaaat
    13741 ttatacaaga agctcaaaaa attaaaatga tcattttgcc aaaaatacaa gcaagaatgt
    13801 ttgacacttc tcaaaatatt tatatagata aagaactcag ttcatcaagt tcgcataaaa
    13861 gtaaggcttt tacttttatt tttacaccag aactagcacc tattaaagac tatgatggac
    13921 ttgattttaa tatcaatttt ccacatgaga gtttgcctta tgttggagct ttggatttaa
    13981 attctgatcc tgttgttatt cctcaaagtg cagatatcaa tacttattta cgcatcaaaa
    14041 aagaatacga taaggctaat tacaatcaag tggtgattga tgcacaaaat gctatcaata
    14101 gatatcgtgg cagtattttt actagtgaat ttatacttta taaattaaga gctcaaaata
    14161 aactttacac tcaagatcca agtatacgcg atcagcaaat tttagaaaag atgattgatg
    14221 atgctaaaaa ttggatgcgt acttttacaa gtgataaaaa tttttcagaa gttttacata
    14281 taatgttaaa aacttatatc gctttagctc agcgtgctga tgtagagtat acaatgtcga
    14341 ttttggataa tgaacaacct aataattatt ttactcagtt atcaaaactt gattatgcag
    14401 attatattta taatttaaat gaaaaagaaa aagctgtaaa tatctatgaa aatacttatt
    14461 ttaatacaaa aaatttagat ttagctgcaa gagcagctat gagtttggca aagaatttgc
    14521 ttttaaatga gcaagtaaat aaagctatag aatatattaa taccatttta aaagccaatc
    14581 ctgaatattt tggaaaagat attccaagat ctttagaact tgctaaatta tttaatcaaa
    14641 aaggacaatt tgatataagt gcaagtattt atgaagatgc ctttgctaaa atgtccaaac
    14701 ttgatccaag ttatgaagaa actttaaaag atttagcctt ggttttatca catgctaaca
    14761 gatctagtga tgctaaaaaa taccttgatt tgtatatgga tgattattta gatggtaagt
    14821 atttagatga aattaaaaaa gcaagtgatg aggtattctt tgctttaggt gataataatg
    14881 caagcttttt gcatcagcgt tatacagatt taatgaagca atatgcaaat aaagatgaga
    14941 atattgcaaa taaagcttta gatgaagatg ttgcacttta ttataaagag ggaaatttta
    15001 gtgccatttt agcttataaa gatcttatag aaagtaaaaa aattccaaat gctactcaat
    15061 ttttagagaa agcagccatt aatgatttaa aaaatgccat aaaagctgat aattgtatca
    15121 atgctgcaaa tatttttatg cgttttagtg cttatgatat aggtcagaaa attgagaata
    15181 aaaaacaaat gttagcttgt cttatcagaa cttctaatgt tgaacaagca cttgattata
    15241 tagataaaaa ttataatgaa gattctatat tttatggtct tcaaaaagca tctattcttt
    15301 ttgataataa acaatatcct caggtgatca aaatttctaa agatatagct aattctagaa
    15361 ttttaaaaag cgatgatgag aattttaagg cttattattt gcaatttttg tctttgttgc
    15421 gtttaaatga ctacaatcaa gctattaaaa ttttgcaaat tttagaaagt tttccaatga
    15481 attttagtat ggtagaagcc tacgatgctt tactttctta tgctaatgat cataatatgc
    15541 aaacaacgat tttaacttac gcacctaagg ccattgacta tcaaaatttt aaaggtataa
    15601 atctttttag tcctaatttg gaatttatgt atcttgatac tttggctaaa atcaataaaa
    15661 atgaagaaag tttagctgtt ttaacagatt tgcttaaatt aaaactttca gataaggata
    15721 aggcaagagc tttatatatc caagctttaa cttatgaaag aatgcaaaat atacaagctg
    15781 aaaaagaaag tttaaaacaa tgtcttgaaa tcaaaagtgt ttcaaattgg cagaatttat
    15841 gtaagagtaa aaatcaaatt ttaaatcaat aagtaaattt agagataact agctttttag
    15901 ctagttatct aa
//
LOCUS       DARATF010000037        15435 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.037, whole genome shotgun sequence.
ACCESSION   DARATF010000037 DARATF010000000
VERSION     DARATF010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15435
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.037"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..907
                     /locus_tag="SB502_000908"
     CDS             <1..907
                     /locus_tag="SB502_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HEG0434362.1"
                     /translation="DFRIFKQGHDKVYEGIYGVNVSKVREIIKIPSLTELPGVPDYIE
                     GIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNILIGFIVHEAKRIRRINW
                     KDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVVEDLGIYAPKTDIDFGKI
                     EKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGINKLEELSQVYGESLNDT
                     LKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIIFNSSLSNEFMNEKGVQEAGGEGYL
                     VKFNASDFFNEIAKVIKKHQSQEQG"
     gene            911..3220
                     /locus_tag="SB502_000909"
     CDS             911..3220
                     /locus_tag="SB502_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEG0434363.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVVATDSNEKSTPQAEPEAPKQEIATPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNVAPKPTNNTANKPTESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            3225..3746
                     /locus_tag="SB502_000910"
     CDS             3225..3746
                     /locus_tag="SB502_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HEG0434364.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            3746..4369
                     /gene="serB"
                     /locus_tag="SB502_000911"
     CDS             3746..4369
                     /gene="serB"
                     /locus_tag="SB502_000911"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEG0434365.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGEL
                     DFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHELIQYLKSKNIQIVIFSGGFHEG
                     INPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI"
     gene            4369..5346
                     /locus_tag="SB502_000912"
     CDS             4369..5346
                     /locus_tag="SB502_000912"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEG0434366.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKEKKTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAISKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMH
                     FKKPLMNFEIYTELNQIISQNEREKACNDLLSDGLEQFCIAFEDILKAL"
     gene            complement(5347..5769)
                     /locus_tag="SB502_000913"
     CDS             complement(5347..5769)
                     /locus_tag="SB502_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HEG0434367.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(5766..9035)
                     /gene="carB"
                     /locus_tag="SB502_000914"
     CDS             complement(5766..9035)
                     /gene="carB"
                     /locus_tag="SB502_000914"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEG0434368.1"
                     /translation="MPKRTDIKNILLIGSGPIVIGQACEFDYSGTQAAKTLKEQGYRV
                     VLINSNPATIMTDPEFADATYIEPVTKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLSKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEV
                     IRDKNDNCIIVCSIENLDPMGVHTGDSITVAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAVNPTNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTIPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDSHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
     gene            complement(9296..10045)
                     /gene="mreC"
                     /locus_tag="SB502_000915"
     CDS             complement(9296..10045)
                     /gene="mreC"
                     /locus_tag="SB502_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEG0434369.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIK
                     DYLGKKISEHFNQANQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVN
                     RVNDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(10035..11075)
                     /locus_tag="SB502_000916"
     CDS             complement(10035..11075)
                     /locus_tag="SB502_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEG0434370.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGFDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(11086..12309)
                     /gene="clpX"
                     /locus_tag="SB502_000917"
     CDS             complement(11086..12309)
                     /gene="clpX"
                     /locus_tag="SB502_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEG0434371.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(12302..13093)
                     /gene="lpxA"
                     /locus_tag="SB502_000918"
     CDS             complement(12302..13093)
                     /gene="lpxA"
                     /locus_tag="SB502_000918"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEG0434372.1"
                     /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGTRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(13093..13533)
                     /gene="fabZ"
                     /locus_tag="SB502_000919"
     CDS             complement(13093..13533)
                     /gene="fabZ"
                     /locus_tag="SB502_000919"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEG0434373.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
     gene            complement(13628..14719)
                     /locus_tag="SB502_000920"
     CDS             complement(13628..14719)
                     /locus_tag="SB502_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEG0434374.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECELYRVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSPVNKQILPASIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLDEENLKQNLKEG
                     FYRSTKDEIVLVEFWRFNAFFKNKWKNFEDFLKKPLSVQAEIKWRNKLFGTYNLSPII
                     ILENILPSRYEVIAKSEIYHDNQEVLVKI"
     gene            complement(14719..15174)
                     /gene="bcp"
                     /locus_tag="SB502_000921"
     CDS             complement(14719..15174)
                     /gene="bcp"
                     /locus_tag="SB502_000921"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEG0434375.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVASHEKFISKFDLKHILLSDSEKEVAKAY
                     GAWGLKKNYGKEYEGLIRSTFVIDETGKIVQIYSNVRVKDHALKVLESL"
     gene            complement(15171..15377)
                     /locus_tag="SB502_000922"
     CDS             complement(15171..15377)
                     /locus_tag="SB502_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEG0434376.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITKLLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKAIK"
BASE COUNT         5222 a         2786 c         2223 g         5204 t
ORIGIN      
        1 cgatttccgt atctttaagc aagggcacga taaagtctat gaaggaattt atggtgtaaa
       61 tgtttctaag gtaagggaga ttataaaaat cccaagcctt acagaacttc caggtgtacc
      121 tgattacatc gaaggtatct ttgatcttcg tggagtggtt atacctgtag tcaatcttgc
      181 caaatggatg caaatcactg agccagaaag cactatgcta aaacctagag ttattattac
      241 tgaatttagt aatattctta ttggttttat agttcacgaa gcaaaaagaa ttcgtagaat
      301 aaactggaaa gatatagaac cagcaacttt ttctacagga tcaggtgctt tagataaagg
      361 taaaattaca ggtgtaacac gcattgaaaa tgatgaagtg ttgctaattt tagatcttga
      421 aagtgttgtt gaagatttag gaatttacgc tccaaaaaca gatatagatt ttggaaaaat
      481 agaaaaattt actggaacag cacttatact tgatgacagc atgactgcta gaaaacgcgt
      541 caaagaaatg atgcaacaga tgggctttca agttgttgaa gctaaggacg gcgtagaggg
      601 cataaacaaa ttagaagaat taagccaagt ttatggtgaa agtttaaacg atactttaaa
      661 aattatagta agcgatgtcg aaatgccaca aatggatggt ttccactttg ctgcacgcat
      721 taaagaagat ccaagattta aagatattcc tataatcttt aactcatctt tatcaaatga
      781 atttatgaat gagaaaggtg ttcaagaagc tggtggagaa ggctatcttg tcaaatttaa
      841 cgctagcgat ttcttcaatg aaattgcaaa ggttattaaa aaacatcaat ctcaagaaca
      901 ggggtaaaat atggaagata tgcaagaaat acttgaagac tttttggttg aagcttttga
      961 gcttgttgag caaatcgacc atgatttagt agagcttgaa tcaaatccag aagatttaga
     1021 attattaaat agaattttcc gtgttgcaca tacggttaaa ggatcatcaa gcttcttaaa
     1081 ttttgatgtt ttaacaaagt taactcacca catggaggat gttttaaaca aagcaagaca
     1141 tggcgagtta aaaataactc cagatatcat ggatgtggtt ttagagtcta ttgatagaat
     1201 gaaaacttta cttaattcca ttcgtgataa tggcaacgat actgctattg gtatggatat
     1261 agaaccaatt tgcgcaagat taacagctat ttcagaggga gagtctcctg ttgtggcaac
     1321 agattcaaat gaaaaatcta ctccacaagc agaaccagaa gcaccaaaac aagaaatagc
     1381 tactccagaa cctgaagtag atgttaatca attaagtgat tctgaagttg aagctgaaat
     1441 agaaagactt ttaaaagtta gaaaagctga agatcaagct cgtcgcgcac aaaagaaaca
     1501 aacaacaaat gtggcaccta aaccgactaa caatacagca aataaaccta cggaaagtgg
     1561 agagaaaaaa gttcctgctt caggtagtaa tgctagcagt atggatcaaa ccatacgcgt
     1621 ggaggtaaaa agattagatc acttaatgaa tctaattggg gagcttgttt taggcaaaaa
     1681 ccgtttgctt aaaatttacg atgatgttga agagcgttat gaaggagaaa aattccttga
     1741 agaacttaat caggttgtaa gtcaattaag tattattaca actgatgttc agcttgctgt
     1801 gatgaaaaca agaatgcaac ctatagcaaa agttttcaat aaattcccaa gagttgttcg
     1861 tgatttaagt cgtgaattag gaaagcaaat agaacttgaa attacaggtg aagaaactga
     1921 acttgataaa tctatcgtag aggaaattgg cgatcctatc atgcatatga ttagaaattc
     1981 atgtgatcat ggtgttgagg atccagcaac tcgtgcagcg aatggaaaac ctgaaaaagg
     2041 tatagtccaa cttaaagctt ataatgaggg caatcacatc gttgtagaaa ttacagatga
     2101 cggtaaagga cttgatccaa atggcttaaa agcaaaagct atagagaaaa atttgattac
     2161 cgaaagagaa gcagatcaaa tgacagacaa agaagctttt gctttgattt tcaagcctgg
     2221 tttttcaact gcggctaaag taacaaatgt ttcaggtcgt ggcgtaggaa tggatgttgt
     2281 taaaaccaac atcgaaaaac ttaatggggt aattgaaatt gatagtgagt taggtaaagg
     2341 aagttcattt aaacttaaaa ttcctcttac cttggcaatc attcaatctt tacttgtagg
     2401 aactcaagag gaattctatg caattccact tgcaagcgtt cttgaaacag ttagagtgcc
     2461 aattgatgat atctatacta tcgaaggtaa aaatgtatta cgcttaagag atgaagtgct
     2521 ttctcttgtg agactttcag atgtatttgg agttaaacaa gtccttgaaa gcggtgatca
     2581 aacttatgtc gttgttatag gggtagcaga aagcaagctt ggtattatag tagatactct
     2641 tgtaggacaa gaagaaatag ttattaaatc catgggtgat tatttacaaa atatccaagg
     2701 tatagcagga gctacaatcc gtggtgatgg tagggtgaca ttaatcattg atgtaggcgc
     2761 tatgatggat atggccaaag aaattaaagt tgatattaaa gcgcaattag aatcaagtgc
     2821 gaaaaaacct aaagaacaac caagtgatta taaagtctta attgtagatg attctaaaat
     2881 ggatagaact ttaatgcaaa aagctttaga accgctagga gttagtttaa tcgaagcaac
     2941 aaatggtgtt gaagcattga atattataaa atctggcgaa catgatattg atgcaatgct
     3001 tatagatatc gaaatgccaa gaatggatgg atacacctta gctggtgaaa ttagaaagta
     3061 ttctaaatat cgcaacttac cattgatagc agttacttca agaacaagta aaactgaccg
     3121 tttaagaggt gttgaagtgg gtatgactga atatatcact aaaccttatt ctccagaata
     3181 cttggaaaat gtggttagaa aaaatttgaa actaggataa gaatatgagt aatgaaaaat
     3241 tagagcaaat tttgcaaaaa cagcaaactc agatggctgg tcctgatgtc gatcaaagag
     3301 aagatgatat catccaactt gttggctttg tagttggaga tgaggaatat gcgattccaa
     3361 ttcttaatat acaagaaatc atcaaaccta tagaatatac tagagttcct agtgtacctg
     3421 attatgttct aggggttttt aatatgcgtg gtaatgttat gccgctcatt gatctagctc
     3481 aacgctttca tttaggaagt tctaaaatga cacctcaaac aagatatatt gttttaagag
     3541 gtgagacaaa tggaactgga gttggaggaa atgctggttt tgttatagat agattaactg
     3601 aagcaattaa aattcacaga aacagaatcg atccaccacc tgaaacttta gttaaagaca
     3661 aaggtatgat ttatggtata ggaaaaagag atgaaaatat cttaactata ctcaaagtag
     3721 aagctttact taagcgcgaa ttttaatgat taaactttgt gtttttgact ttgatgctac
     3781 tttaatggat ggtgaaacca tcgatatttt agctacagcg catggcaagg gtaatcaaac
     3841 aagcgaaatt acccgccatg ctatgactgg agaacttgat tttttcgaaa gtcttcaaaa
     3901 acgagtaagc tttttaaaag gtatgtctta taaaaaagtt ttagaattaa gtagcacact
     3961 tccactaatg cgtggagcac atgaacttat ccaatattta aaatctaaaa atatacaaat
     4021 tgttattttt agcggtggtt ttcatgaagg cataaatcct gctatgcaaa aacttggaat
     4081 taacctcggt tttgcaaatt atctgcatca taaaaatgac attttaacag ggctagttgg
     4141 tggggaaatg atgttttcaa attcaaaagg cttaatgcta caacgattaa aaagcttttt
     4201 aaatttgaaa acagatgaag tgatgtgtgt tggcgatggg gcaaatgatt tggcaatgtt
     4261 taacgaaagt ggattaaaga ttgcattttg tgctaaagaa attttacgtt ctcaagctga
     4321 tatttgcata gatataaaag acttaaaaga aataataaag gtaatataat gaaaaatttt
     4381 tctctttggt gtgattttat agaaaatagt tttttagata atgaattttt aaatttatta
     4441 tcacatggaa ttaatggcgc tacttcaaat cctgctattt ttaaaaatgc tattttaaat
     4501 tctccaattt ataaagataa aattcttaaa ttaaaagaaa aaaaaacaaa agatatttat
     4561 gaagaattag caatttctga tattcaaaaa gcagctgata aattagctcc tcttttttat
     4621 caaaaaaatg atggatttat aagtattgaa atagatccaa gacttcatga taacacgact
     4681 cttagtttag gcgaagctaa aagactttat agtgctatta gcaaagaaaa tgtaatgatt
     4741 aaaataccag ctacaaaagc ttcttatgaa gtaatgtatg aacttatgaa aaatggtatt
     4801 agcgtcaatg ctaccttaat tttttctctt gaacaaagtc aaaaatgttt tgaagcttta
     4861 aatgcaggtt tagtcgaatt tagaaaaaac aatatagcct taaaagaaca aaatactaga
     4921 acaccacaag ctgttataag tatttttgta agtcgttttg atagactttt aaatcctaag
     4981 gctaaggagc aaaatcgtat tggaatttta aatgcaaatt tagcttataa caatatctac
     5041 tcaaaaaatg aacctaatat tcgcgccttg tttgcaagca ccggagttaa aggagatgat
     5101 ctgccaaaag actattatat caaagaactt ctttttgaga attctgttaa tactgctcct
     5161 cttgatgcaa tagaggcatt taaaggaaaa atgcatttta aaaaaccttt aatgaatttt
     5221 gaaatttata cagaacttaa tcaaatcatt tctcaaaatg aacgagaaaa agcttgcaat
     5281 gacttattaa gtgacggcct agagcaattt tgtattgctt ttgaagatat tttaaaagct
     5341 ctttaattaa cgtattttta tcattttatt ctttgaaagt tttaatattt ttgatgggat
     5401 attttcgaaa aatttctcat caagtattat atcggcaaca cttctagccc attcttcatc
     5461 aaattctttt ccatgcttgt ttgccgaaga tgaataaaaa tagccatttt tacttaaaaa
     5521 attcgcatgt ttacactctt tcacaatacg aatggcctga ttattgggat aaataaaagt
     5581 tgttttttta gaacgacgta ctaaattttt aaaagatttt ggaattcttg ctaaactttt
     5641 taactcgcaa aatttcgcag aagtgattaa gcaaggctga tttttatctc taccttttaa
     5701 agcattaatc tcttctaaat ttttacttaa aaatcctacc gtagtatctg tttgagctaa
     5761 ataaatcaag atttaagcca ctcttgcaaa ctctttacat ctaggcaaga tttactctgt
     5821 atagctttaa tcgattttgc acctgctaaa gctgatcgta aatttgtaaa ataaggtatt
     5881 ttaaaacgaa taatattttc acgaattttt ttcgtatcgc ctttaaaact gtgactatcg
     5941 cttgtattga taactaagtg aatttctcca tttttcaatt tatcttcaac attggggcgt
     6001 ccttctgaaa ttttatgtac aagttcgcac tcaaaaccac tttctaaaat ttccttgcaa
     6061 gttccccctg ttgccataag cttaaagcca agctttacat attctgcagc gatttttttg
     6121 gtatattttt tatccttatc ttttaaggag ataaatacca cgccttgctc tggaagatga
     6181 ttaaacgatg caatttgact tttcgcataa gaatttgcaa aatccttgct tatacccata
     6241 acttcacccg ttgaacgcat ttcaggacct aattctaaat cacttccact aagttttgca
     6301 aatggaaata ctgcttcttt cacgctcata tattttggag ttttagggcg taaaatttta
     6361 gtatcaaaat taaccacttt aaaagtatca taaaatttta aagcttcttt taaatttcct
     6421 tgccacatca cacgcgttgc cacttttgct aaaggaatac ccgtagcttt actaacaaaa
     6481 ggtatggtac gactagctct aggatttacc tctatcatat aaagctcatt attatgtaaa
     6541 gcaaattgta tatttaaaag tcctacaact cccaaattta aagcaatatc tgcggttttt
     6601 tgtgcaataa attcttgcat tttttcatcg atattgcaag gcggcaaaga acaagcactg
     6661 tcacccgaat gaattcctgc ttcttctatg tgctccataa ttcctgcaac ataaacatct
     6721 ttgccatcac aaatcgcatc aacatcaatt tctgtagcat tgtctaaaaa ctgatcgatc
     6781 aaaacagggc ttttatcgct tacatccaca gcttcttgca tatagagtct aagttcagcc
     6841 tcatcattta ccacgcgcat cgcacgccca cctaaaacat aacttggtct tacaagcaca
     6901 ggatacccta tatcactagc cttaagaacc gcttcttcta cgcttgttgc agtagaattt
     6961 tttggctgat tgatacctag ctttgtaata aattcggcaa atttctttct atcttctgcc
     7021 atatcaatta ctcttgcgct agtacctata atcttagctc caaaagcact taaacgctta
     7081 gcaaatttca aaggagtttg tccaccaaaa tgcacaatca ctccatcagg tttttcacgc
     7141 tcaatcaccg ctcttaaatg ttcgaaatca ataggctcga aatacaaaat atcacttgta
     7201 tcatagtcag tcgaaacggt ttcaggatta caattataca taatagtttt aatacccata
     7261 tctttaagcg caaaagaagc atgtacgcaa gcatagtcaa attctatacc ttgtcctata
     7321 cggtttggcc ccccacctat aatcatcact tttttttctt ttttatcctt agcatcgttt
     7381 ttactttgag tgagttcgct tacattgata cttgaataaa gataaggagt taaggcttca
     7441 aattcacccg cacaagtatc cacttcacta aattctgcga tgattttttg cttcattctt
     7501 gcataataaa tatcattttg gcttaattct aaattatctt tcaaatttac aagcaaggct
     7561 atcattttat ctgaaaagcc catagttttt gcttttctca aaagagcctt attgtttaaa
     7621 atatccatat caatttgttc ttcaaaatct acaatttctt taatctgtgt taaaaaccaa
     7681 ggatctattt tacaaagctc ataaagttct tctacgctaa aaccttccct aaaagcttga
     7741 gcaacataaa gtaaacgctt ttcattggca ttgcgaattt taaaaacaag atcatttcta
     7801 tcttcaaatt ttaccctatc aaaaccactt aaagaacgct caagcgaaca aagtgctttt
     7861 tgtatacttt ctttaaaagt gcgtcctata gccattacct cacccacact tttcatagct
     7921 gtacctaaag ttgtatttgc tcctggaaat ttttcaaagg taaagcgagg aatttttgtt
     7981 acaatataat caatcacagg ctcgaaagat gcaggagttc ctgtaatatc atttttaatc
     8041 tcatctaagc taaaacctac tgccaaaagt gttgcaacct ttgctatagg ataacccgtt
     8101 gctttagaag ctagggcgct tgatcttgaa acccttggat tcatttcaat aactatcatt
     8161 ctaccatttg ttggattgac agcaaattgc acatttgatc cgcccgtatc gacgcctatt
     8221 tcacgcaaaa tggcaaaaga ggcattacgc ataacttggt attctttatc agttaaagta
     8281 agagcaggtg caaccgtgat actatctcct gtatgcactc ccataggatc aagattttct
     8341 atactacaca cgataatgca attatcattt ttatcgcgga taacctccat ttcatactct
     8401 ttccatccaa gcaaactttc ttcgataaga atttcatgga ttggcgaaag tgctaaggca
     8461 gtattagcga gttctttaaa ttcatccata ttataaacca caccacttcc agcaccccct
     8521 aaagtataag aagcacggat catcaaagga aagccgattt catctacagc ttttaaagct
     8581 tcatcataat tatacgcgta catagatttt gacaaatcca tgccgatttt tttcatacat
     8641 tctttaaaaa cttgacgatc ttcgcctttt ttaatcgctt cagggtttgc acccaaaaac
     8701 ttcacatcac ctaaaagtcc gctttcataa acttccatag ctacatttag agccacttgt
     8761 ccacccatgg ttggcaaaat ggcatcgatt ttctcttttt taataatact taaaatactt
     8821 tccttggtta caggctctat ataagtagca tcagcaaatt caggatcagt cataatagtc
     8881 gctgggttag aattgattaa aactacgcga tacccttgtt cttttaaagt ttttgctgct
     8941 tgagttcctg aataatcaaa ttcacaagct tgacctataa cgataggacc acttcctata
     9001 agtaaaatat ttttaatatc tgttcgtttt ggcatgaatt ttcctaagag cataaatttg
     9061 ggctgattat aacaaaaatt agttttataa actttgaaat tatcgatata attttaaaaa
     9121 ataaacactc tgcttttaat ctaggaaata atacataaag aaatttaaga ttttttataa
     9181 aattctcatt caattataaa catttatttg ataatttaac aaaattttta gcattaaaca
     9241 aagttataat aattagcaaa aatatagaaa atttttaaaa agtctaatcc ttgacttata
     9301 aattatctac tacatataaa taagcaggaa tactaatctt aacataaggc tttacttcta
     9361 cactttgata catatcttca tcattaactc tattcacaat accgacaggt atatctgaaa
     9421 agaaaatatt atcaagtcca cttgttaaaa tttcatctcc ggtattaatt tttgcccatt
     9481 ttggaataaa tttaaccaca atcctgccat cttcaccctg gattaaacct ggagctttgg
     9541 attttcctat ataaacagaa aaaacacact gatcatcacc ttgtaagaga gccattgctc
     9601 taccattttt attaatagct atacctgcag tatatccttg atatattaaa ccacgatttt
     9661 taccaactgg aattttgctc caatctaacc ataatttttt ataatcattc aattgaacgt
     9721 aagaaataac tctagttaaa gaaacttgag gtaaatattt tgtagaattt tgatcctcta
     9781 aaatacgatt taattgattt gcaaaactag ttacctttac agcaatatct tctaattctt
     9841 tatttctagc ttttagttgc tgaatttgat ttgcttgatt aaagtgttct gaaatttttt
     9901 ttcccaaata atctttaata ttataaaaat tacctataac aaaatcatta acacggagaa
     9961 cattttgctt gataagtcct ccataataaa aagatataaa aaccaaaaag gctaagacaa
    10021 gaacataaaa aatcttattc ttcattggtt aattgttgca ataatgaaat ttcctctaaa
    10081 gctttacccg ttccttttgc tacagctaaa agcggttcat ctgcgatata aactggcaaa
    10141 cgtacaattt cacttaagta tttatcaaaa ccacgaatca atgctccacc acctgttaaa
    10201 actacaccat tttctactat atcacttgct aaatcaggcg gcatcatttc aagaaccatt
    10261 tttaaagcat cagcaatttc ttttaaatac tcacgcattg cttctcttac atcttcactt
    10321 gtaagttcaa tacgacttaa aagtccactt acttgatcgc gtccttttac caccatagaa
    10381 agttcttttg gaagttgtat tgctgaacct atggtgattt tgatctcttc gcctgttctt
    10441 tcacctatga taagattgta tttttctttt acataattaa ctatactcat atcaagctta
    10501 tctccagccg tacgaataga ctttgaaatc acaagtccac ccaaagaaat cactccgatc
    10561 tcagtagttc caccccctat atctactacc aaatttcctt taggttcttg tataggtaaa
    10621 cttgcaccaa tagctgctgc cataggctct tcgatcaaaa atacctctct tgcacctgca
    10681 cttaaagcac tttctcttac cgcttttctt tctacttgag ttaaaccata aggaacagaa
    10741 ataataattc tagggcgtaa aaaacttttt ctacgatgtg ttttttctat aaaatagcgg
    10801 atcatttttt cagtcatatc aaaatctgca atcacgccat ctttcatagg acgaatagct
    10861 tcgatattgc ctggagtttt tcccaccata tctttagctt ctttacctac ggctaaaatt
    10921 tttgctttgg aaccatacct ttctctttca actgccacaa cagaaggctc gtttatcact
    10981 atacccttat cttttaccaa aactagcgta ttagctgttc ctaaatcaat ccccatatca
    11041 ctagaaaaaa atcctataag ttgatctaat atcatttcta tccttttaac ttatttttct
    11101 ttttattaat aatgcctttg cattgtcttt aacaacttct ttggttatta caatatcata
    11161 gtttttatac tctggtaact caaacattaa atctaccatc atttcttcta taatacttct
    11221 aagcccccta gcccctgttt ttctctccaa tgcaagctgt gcgatagctc ttagagcatc
    11281 ttcttcaaat tttaaattta ccccatcaat agcaaaaagc ttttgatatt gcttaataat
    11341 ggcattttta ggctcagtta aaattcttac catatcttct tcattaagct catttaaaga
    11401 tgcaatcaca tgcaaacgac ctataagctc aggaatcaaa ccaaaatgca ccaaatcatc
    11461 aggttcaatt ttctcaagta aagctttatt ttcttctttt gcatcatcaa aaaagcccac
    11521 aactttatcg ccaagttttc tttttaagat agtttccaaa ccatcaaaag ctccaccaca
    11581 aacaaataaa atatttgaag tgtcaatttg tataaactct tgatttggat gttttcttcc
    11641 cccttttggt ggaatattta ccaaacttcc ttcgataatc ttaagtaaag cttgttgcac
    11701 accctctcca cttacatcac gagtaataga acgattttca ctcattctag caattttatc
    11761 aatctcatca ataaaaacta tacctttttg agctctttgc acatctccat ctgcagcttg
    11821 taaaagacgt gttaaaatat tttccacatc ctcacctaca tatcctgctt cagttaaaga
    11881 agttgcatca caaattgcta taggtacatc taaaaattta gctaaagttt gcgccaataa
    11941 agtttttcca cttcctgttg gcccaacaag taaaatattt gacttaaaaa gctctgtatc
    12001 atcatcttga agttcagctt taaaaagtct tttataatga ttgtatactc caacactaaa
    12061 aactttttta gctctatctt gtcctatgac ataacgatct aaataagctt ttaattcttt
    12121 tggagtgata tctttaaatt ctgtattatg actttgttta ggttctttaa attctttttc
    12181 ttctccataa ataatactat aagcaccttc aacgcaatat tcacaaataa aagcatcatc
    12241 attttcattt gctaaaattc ttctttgtgg attctccact tcattgcaaa aactacattt
    12301 tctaggcatt atttttaccc ctatagacag gaattccacg ctttgtttct aatataaaat
    12361 ggcacatttt tttaacattt tcactttctt gattttcaag caaattttta gcattttctt
    12421 ttaaatctcc ttgtctaaat aaagttttaa aagctctact aagtctatct acttcatctt
    12481 tatcaaaacg acgacgagtg cctactaaat ttaaacttct aatacttgca cgatttcctt
    12541 ctgctaaaca aaacggtact atatcctgag aaagtgcact tgctcctgct atcatacaac
    12601 cctcacctac tttgacaaat tgatgaatag gtgtaagccc gcctacaacc gtaaaatctc
    12661 caagctctac atgtcctgcc aaagttgcat tattagctaa aataatatta ttacccaaaa
    12721 gacaatcatg agcaatatga caataagcca taataaaagc attatcgcct atacgagtaa
    12781 aaccatctcc tttagctgta cctgaattta tcgttgcaaa ttctctaata gttgcatttt
    12841 tccctataac aacaccgctt ttttgctctt ctttataaga tatgtcctga ggaatatcgc
    12901 ctactattgc ataagaaaat acacgagaat gatcacctat agttgtatct gaaagaattc
    12961 gagcaccttg tttgatgaca acattattac ctattttagc atctttgctt acataagcat
    13021 aagcttctat tacaacatcg tcaccaagtt gtgcaccctc ttcaatcacc gcacttggat
    13081 gaattttttt cattatttat ccactatcat agctttaagc tcggcctctg caactaaatt
    13141 tccatctaca aaagcttgcc ctttaaaaat ccacatatta ccacgatttt taaccacgct
    13201 catttcataa tcaagcctat ctccaggacg cacaggattt ctaaattttg ctccatctat
    13261 gcctgtgaaa taaactactt tactttttgg atccacttta tcttccatac tttcaaaagc
    13321 taaaactcca cctgtttgag ccataccttc taaaatcaaa actccaggat aaataggatg
    13381 ccctggaaaa tgtcccataa aaacatgatc acttatactg atgtttttat atcctcgtac
    13441 cacttcttta acttttaatt ctgtaatttt atctactagt aaaaaaggat aacggtgtgg
    13501 taaaatttct tgaatttgca ttacatctat cattattaaa ttaaccttga aaacaattaa
    13561 aaattttatt atataaaaaa atcattaaaa attatattaa caaaaaaagt ttttcttaat
    13621 aaatttctta aatttttaca agcacctctt gattatcatg ataaatttca ctttttgcta
    13681 tcacttcata tcttgaaggt aaaatatttt cgaggatgat aataggacta agattataag
    13741 ttccaaacaa tttattacgc catttaattt ctgcttgaac acttaaaggt ttttttaaaa
    13801 aatcttcaaa atttttccat ttgtttttaa aaaatgcatt aaaacgccaa aattccacta
    13861 aaactatttc atctttagta cttctataaa agccttcttt taaattttgt tttaaatttt
    13921 cctcatccaa agaaaatctt gtataagcgt ttttaaaatg cgaataaaat aaaatatgag
    13981 atttaacggg ctttttatct aattttatca aagcacttaa aagacgataa tttaaaaatt
    14041 tctctcttaa aatttcaaat tttatacctt ttttttccca taaaactact tttttataaa
    14101 gagctattct tgcttctata cttgcaggta aaatttgctt atttacagga gacattaatt
    14161 catcaataaa attcttatct tgtttttgtt ttttaagccc ataaatgcag ccgcaatagt
    14221 tttgatgata aagcatttcc ttttttgcta aagcaaactg tctttgagta ccgccatttt
    14281 tacgaaaatc aggagctaaa aactctactc tataaagctc acattctttt tgtaaagcat
    14341 tttttaactg ttctaaatct tttttagggc tggttaaaag cgtagtagta agcttttttt
    14401 ctcctatttt agcagcaaat ttaacactag atcccattct tacatcaaag caaatttcac
    14461 accttgcacc cttttcaggc tcatcttcat aaccacgcac agcattaagc catttttcat
    14521 actcatactc acctttataa agcttaatac caagtttatc acaagatctt tttacatcta
    14581 aaaatcttag ttcgtattcg cttaaaggat ggatatttgg atcataaaag tatcctataa
    14641 ttttttcatc aggataagtc tttctaagtt cttcaataaa ataatgacta tccacactgc
    14701 aacaaatatg cactaacatt aaagactttc aagcactttt aaagcatgat cttttacacg
    14761 aacattacta taaatttgaa caatcttacc tgtttcatcg ataacaaaag tagaacgaat
    14821 aagaccttcg tattcttttc cgtaattttt cttaagcccc caagctccat aagctttagc
    14881 aacttctttt tcactatcgc taagtaaaat atgttttaaa tcaaatttag agataaattt
    14941 ttcatgactt gccacgctat caggactgat accaataatc accgcatttt taccaccaaa
    15001 tttatcataa tttgcgctaa aatcacaagc ttctgtagtg caacctgggg tattatcttt
    15061 tggataaaaa tacaaaatca cctttttgcc aataaaatct tttaatgcta tttttacccc
    15121 atcttgattt aaaagctcaa actgaggtgc tttatctcct atgtttaaac tcatttaatt
    15181 gcctttgctt tgatagcttc aacgctttct ccgccaaagc ctatatcata attttctaca
    15241 tcttctaaaa ccaccacaac tctttcttta cttttattat atttcgtgct taaaagtttg
    15301 gtaatatcag ctataagctc cgctttttgt tccttgctta aagacggctt tgctaattta
    15361 atatttacta atggcataat ttctcctttt taacgataat ttttcataat tatttcaaaa
    15421 aatacctaat atttt
//
LOCUS       DARATF010000038        15249 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.038, whole genome shotgun sequence.
ACCESSION   DARATF010000038 DARATF010000000
VERSION     DARATF010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15249
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.038"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            18..1202
                     /gene="kpsS"
                     /locus_tag="SB502_000923"
     CDS             18..1202
                     /gene="kpsS"
                     /locus_tag="SB502_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HEG0434377.1"
                     /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKL
                     NFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            1275..2396
                     /locus_tag="SB502_000924"
     CDS             1275..2396
                     /locus_tag="SB502_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HEG0434378.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHVFNIKVDLSKIE
                     KNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYE
                     LVLVAHSVGTIVCIEVLECILRQNLDLSLLRKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            2393..3754
                     /locus_tag="SB502_000925"
     CDS             2393..3754
                     /locus_tag="SB502_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEG0434379.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDCKRAKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGVIEISHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     RKL"
     gene            3751..4170
                     /locus_tag="SB502_000926"
     CDS             3751..4170
                     /locus_tag="SB502_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434380.1"
                     /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGIFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
     gene            complement(4171..4518)
                     /locus_tag="SB502_000927"
     CDS             complement(4171..4518)
                     /locus_tag="SB502_000927"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEG0434381.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAVV"
     gene            complement(4518..5054)
                     /gene="fliL"
                     /locus_tag="SB502_000928"
     CDS             complement(4518..5054)
                     /gene="fliL"
                     /locus_tag="SB502_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HEG0434382.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPAQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            5157..6545
                     /gene="pgmL"
                     /locus_tag="SB502_000929"
     CDS             5157..6545
                     /gene="pgmL"
                     /locus_tag="SB502_000929"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HEG0434383.1"
                     /translation="MNLKEKMLDVIFREYDIRGLYDKELNEKSVKAIGFCLGQTMLNR
                     GCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANV
                     MITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILNLY
                     VKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAEPDGQFPNHAP
                     DPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKDIPN
                     PRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRY
                     FGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKE
                     IEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESMVF
                     TLFNDIKARFKN"
     gene            6592..6969
                     /locus_tag="SB502_000930"
     CDS             6592..6969
                     /locus_tag="SB502_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 family protein"
                     /protein_id="HEG0434384.1"
                     /translation="MKKILILLTLCAFAFGASECDRKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCAKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKA
                     KKEALKEQKEKIKKEIKEYIDNL"
     gene            complement(7001..7327)
                     /gene="rsfS"
                     /locus_tag="SB502_000931"
     CDS             complement(7001..7327)
                     /gene="rsfS"
                     /locus_tag="SB502_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEG0434385.1"
                     /translation="MQERIDLIVKILDEKKAENIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTRLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLEN
                     LKKGRV"
     gene            complement(7355..7900)
                     /gene="nadD"
                     /locus_tag="SB502_000932"
     CDS             complement(7355..7900)
                     /gene="nadD"
                     /locus_tag="SB502_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEG0434386.1"
                     /translation="MKIALFGGSFDPPHNGHNSVVLEALGKLDIDKLIIMPTYINPFK
                     QSFSADEKQRFLWVKKLWGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVIANRNDIGIPKNFKDLKTNKKIASSFIRDTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            7960..8958
                     /gene="gap"
                     /locus_tag="SB502_000933"
     CDS             7960..8958
                     /gene="gap"
                     /locus_tag="SB502_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEG0434387.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGVQIVLECTGAHLT
                     MAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            8961..10163
                     /locus_tag="SB502_000934"
     CDS             8961..10163
                     /locus_tag="SB502_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEG0434388.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKT
                     KAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            10160..10831
                     /locus_tag="SB502_000935"
     CDS             10160..10831
                     /locus_tag="SB502_000935"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEG0434389.1"
                     /translation="MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVAFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKF
                     DFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGV
                     SAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            10835..11659
                     /gene="fabI"
                     /locus_tag="SB502_000936"
     CDS             10835..11659
                     /gene="fabI"
                     /locus_tag="SB502_000936"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEG0434390.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            11663..13156
                     /locus_tag="SB502_000937"
     CDS             11663..13156
                     /locus_tag="SB502_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEG0434391.1"
                     /translation="MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILAKHLS
                     LGNEIPVLAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILDKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANISSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGASLVENYKKSFEKNYAFIEQ
                     NFDENPMPSKDFWKYLEMSFILVKGAFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS"
     gene            complement(13153..15006)
                     /gene="feoB"
                     /locus_tag="SB502_000938"
     CDS             complement(13153..15006)
                     /gene="feoB"
                     /locus_tag="SB502_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEG0434392.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSVLSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKSPEKEDLLYFINQLSKKIITHKKEERNLTKKIDA
                     LLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASAL
                     ADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPL
                     ITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNY
                     LFGIYILGAILGLFAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLIWFMVYNKAKMYL
                     KKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLEL
                     DWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILF
                     VMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
     gene            complement(15003..15227)
                     /locus_tag="SB502_000939"
     CDS             complement(15003..15227)
                     /locus_tag="SB502_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEG0434393.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
BASE COUNT         5268 a         2015 c         2745 g         5221 t
ORIGIN      
        1 gaatttttag caaagaaatg agatttagca ctaaaattaa aaaagaattt agcggtaaaa
       61 atgttttact cttgcaaggg cctgtgggaa atttttttca tcatcttgca ataaaaatga
      121 aaaaaaaaca aaccaaagtt tttaaactca attttaacgg tggagatttt tttttctatc
      181 ctagtggaac gaggtgtaag tgcgatgaaa aagatcttga aaatttctat agagattttt
      241 ttcaaagcaa aaaaatcgat gctattttaa tgtataatga ttgtcgtatt atccatgcta
      301 aggctattaa agtggctaaa gaattaggaa ttgaaatatg gatttttgaa gaaggatatt
      361 taaggcctta ttgtattact ttggaaaaag atggggtgaa tgcaaattct tctttaccgc
      421 gtgataaaaa tttttatctt tctcaaaata tttttaccaa agaaagcata aaagaaattc
      481 caggtggatt taaatttatg gcttttgatg cttttttgta ttggttgttt gcttttattt
      541 tggctccatt ttttaacaac aaacttcatc atcgcacttt atatcctttt gaatttttat
      601 tttggtttag atcattgtat agaaagtatc tttataagat tacagaaaaa aaactaaatg
      661 aaaagattta taatttagaa aaaaagtact ttttggcgat tttacaagtt tatagcgata
      721 cgcaaattaa atatcattac aaaaaaagca tagagcactt tatagaggaa accatacttt
      781 cttttgcaaa ccatgcaaga gctaaatctt atctagtttt taaacaccat cccatggata
      841 ggggctataa gaattattct aaactcataa atgatttaag tcaaaaatat catgtagaag
      901 gaagggtttt atatgttcat gatacccact tgccagttct tttaagaaag gctttgggtt
      961 gtattactat aaattcaaca gtaggcctta gtgctatttt agaaggctgt ccgactaagg
     1021 tttgtggcaa tgctttttat gattttgaag gcttatctta tccaaaaaaa cttcaatttt
     1081 tttggcgtga agctcatgct tataaaccca atcctgtttt ggtatgtaat tttaaaaaat
     1141 atcttttaca aactaatcaa ttcaacggca atttttataa aaatttcttt ttagacaaat
     1201 aagactaaaa agctttgatt aagagagctt ttaaagcaaa gttgttataa ttaaaagcaa
     1261 aaagaaatta ttgtatggat agggaagtat tttatatagc aggatatgat cctaaaagtt
     1321 atagatttta ttatgattta tttaaaaaaa acctaaaaga ttattctcat gtttttaata
     1381 ttaaagttga tttaagtaaa attgaaaaaa atgagcaatt tccttttttt caaatttctt
     1441 gcgaaggagt acaaactaaa tatcattttt taacatggaa tgatattgtt aagaaaaatt
     1501 ggtcagaaaa ttataaagat gctttggcag attgttatag tttttttaga atttatacta
     1561 tcacagggct ttttatcaaa tttggcaaag agtcgattta tcaacttatc acaggttatt
     1621 atcctttttt ttatgtgtta ttttctttac tattttcttt ggttttggct tttggaagtt
     1681 ttgctttttt gcaaaattat atgcattttt ctttagctat tatcatagga tgttttttag
     1741 gatttttact aaatcatttt ttatttaaat taggtaagaa attagctgta ttttggatag
     1801 caagaatttg tgctttttgt gctacttggc aagataaaaa aacaggcact atgcaagaaa
     1861 gaatcaagct ttttgcgaat accatagtag ataagctaaa acaaaatgaa aataaacaag
     1921 attatgaact tgttttagta gcacatagtg ttggaactat agtttgtata gaagttttgg
     1981 agtgtatttt aagacaaaat ttagatttat ctttacttcg taaattaaaa attcttactt
     2041 taggagaatg cattccttta gtgagttatc aaaaaaaagc ggatgaattt agaaagaagc
     2101 ttgaatttgt ttcaaggttt gatttaaaat ggtatgatta cacatcgatt attgatggag
     2161 catgttttcc tcaagtggat tttttccgca cgagtggtgt aaatgctaaa tttacacccc
     2221 catttttaag tgctaaattt cacactttat atgaaaaaca tgagtataaa aaaataaaaa
     2281 gagataaaaa caaagcgcac tttttatatc tttatagtat tagtgttaaa ggtgattatg
     2341 attttttttc tttcatcata atgcctaaat ttttagaaga aaaggtaaaa atatgagtga
     2401 atgccccttt tttccaaaac cttataaaaa taaagcttct acgcttttaa cttttttgtt
     2461 aaagcgtaga tcttggcttg acgggcttta tgagcgtagt tataaaatgc aaacaggcta
     2521 tgtgaagatg ccaaattttg atctttatgt cataaatgac actaaagaag ttaaaagaat
     2581 gatggttgat gaggttagag aatttcctaa aagtgcattt ttacatgagc ttttaagtcc
     2641 gcttttaggg gagagtattt ttactacaaa tggtgaagtt tggaaaaaac aaagagagct
     2701 tttgcgtcca agttttgaaa tgactcgtat caataaagtg tttaatctta tgagtgaagc
     2761 tgtggcagat atgatggatc gttttagcaa gtatccaaat catgctgtta tcgaagtaga
     2821 tgaagctatg acttttatta ccgctgatgt gatttttcgc accattatgt cttcaaaact
     2881 cgatgaggaa aaaggtaaaa aaatcttaaa cgcatttgtg acttttcaag agcaaagcgt
     2941 gcatacagcc atgcgtcgta tgtttcgttt tccaaaatgg ctttcttatg tgttaggaga
     3001 ttgtaagcgt gctaaggccg gagatgtgat cagacaggtt ttaagtgata tcataaaacc
     3061 aagatatgat atggcagata atgcagaatt tgaagatatt ttaggatctt tgcttttagt
     3121 agtggatgct gatacaaata agcgtttttc ttttgaggaa attttagatc aagtggctat
     3181 gcttttttta gcaggacatg aaaccacagc aagttctttg acatggacgc tttatttgct
     3241 tagtctttat cctaaggagc aagaaaaagc ttacgaggag attactcagg ttttacaggg
     3301 tggagtcatt gaaatttcgc atctaagaca gtttaaatac ttaacaaata tttttaaaga
     3361 atctttaaga ctttatcctc ctgttgggtt ttttgcaaga gaggcaaaaa aagatactca
     3421 agttagagat aagcttatta aaaaaggttc tggggtggtg attgctcctt ggctgataca
     3481 cagacatgaa gaattttgga caaatccgca tggatttaat ccttctcgtt ttgaaggaga
     3541 gtacaaaaaa gatgcttatt tgccttttgg ggtaggggaa agaatttgta taggacaagg
     3601 ttttgctatg caagaagcga ttttgatttt ggctaatatt ttaaaaactt acaaactaga
     3661 acttgaagaa ggttttgtac ctgatgtagt agggcgttta acagtgcgtt cggctaatgg
     3721 tatgaggata aaatttagca aaagaaagct atgaaaagag ttagaactaa aattcgcgcc
     3781 aattttcgtc gtcgtgtaaa acgcacttta aaaggaagct taaaagaaaa attagcaggg
     3841 actattctgc tttgtgcaat agtaccttta gcagttttag gatatctttt tatcgtgatt
     3901 ataggaattt tttttaatac cgcacgagca agacagggtg ttagagcctt agatcatttt
     3961 gtaaatgcaa gcttgtttaa tggctatgct tgggagagcg tttcttctca tgcgtggcgt
     4021 gaaagaaatc gcaaaaaatg ggcaaggatt gttataaaaa tcacagattt ttttcaaaaa
     4081 gatcattgta aaagagcaaa caaaagagaa caacctgtgg tggatttcat actttcaaga
     4141 aatttagaca agcaaactat aggaaaataa tcaaactaca gccactatgg ctatagcaaa
     4201 accattatca tgagaaatac ttagggaagt ttgagtgata ttaaaatctt ttgtaatttt
     4261 ttgagaatat tttaatttag gcgcgttttt ttcatctttt gatatttcaa tatcaaaaaa
     4321 actgcataat tcacaaattc caacacccaa agccttgcta gcggcttctt tagcagccca
     4381 aagacctgct agagttgctg gatttttaat gagtatttgt tcttttgggc ttagaaattt
     4441 atccaaaaaa tttttgccat gtctagaatg aattttttct attctagaaa tggcgatgat
     4501 atcacagcct acacgcatta agaaactaca aaatccgtaa aataaacatt tttaataaag
     4561 ccatcggtta aaatttcatt gatttttcca actagctcat cttttaaacg ttctttgcct
     4621 ttttgtgtac ttacttcttc aaaagtttta gctgttaatg tacgaataat aatatcacga
     4681 atgactggga cttttttatc aagttcaggt tttaaaagtt cgctattttg ttctagttct
     4741 atagtgcatt ttacatatct tgagccgcta tcgctaagca aatttagggt aaaaggatca
     4801 agtggataca taggacctat attagcaaaa tcactacctc gctgagcagg agctgaaact
     4861 ttaggtttat cggcttttgc ctcttctttt ggagcttctt tgacttcact ttcatcactt
     4921 gaactgcttg aaataagcca agcaattact cccataatac taagaagtaa aacaaaaagt
     4981 aaaataacaa taataattac aagtgaacca ccttttttct tttttgtttc ttcgttttct
     5041 aattcttcat ccataaattt tccttcattt agtgaaatta atgtaaaatt gtagcaaaaa
     5101 tttcttttct atccaaattt gctttagaaa aacgataaat ttaggtcaaa gaagagatga
     5161 atttgaagga aaaaatgtta gatgtgattt ttagagaata tgatataaga ggactttacg
     5221 acaaagaatt gaatgaaaaa agcgttaaag ctataggttt ttgtttggga caaactatgt
     5281 taaatagggg ttgtaaaaat gtaagcgtgg gctatgatgc aagatatagt gcaaatgaac
     5341 tttttaatta tctagtgagt ggacttaaca aagcgggaat aaaaatctat gatatagggc
     5401 ttgtaccaac tccattggga tattttagtc tttatgaggg cttaaaattt gatgcaaatg
     5461 ttatgataac aggctctcat aacccaaaag attataatgg ttttaaaatt actattaata
     5521 aagaaagttt ttttggtgta gaattaaaag agttttcaaa agaagtttat aagcatttag
     5581 atgatgatat tgaagaaaat ttagaagtag aaaaatacga tattttaaac ctttatgtga
     5641 aatttatgtg cgagcaattt agctttttaa aggattttaa ttataaattt ggtgttgatt
     5701 gcacaaatgg tgcggctgga gtggtgataa agcctttaat caaggcttta aatttaaaag
     5761 ctcatgtaat gtttgcagag cccgatggac agtttccaaa ccatgctcca gatcctacag
     5821 aagaagaaaa cttaagtgcg attagagaat ttttaaatca aaatcaagat tattctttgg
     5881 cttttgcttt tgatggggat gctgatagaa tggttgcttt aagtaaaact catgtatttt
     5941 gtggggatga gctttgttat ttgtttgcta aagatatccc taatccacgc attttaggtg
     6001 aggtaaaatg ttctaaaaat ctttttgatg aagtggctaa atttggaact atttttatgg
     6061 gaaaaacagg acattctaat atcaaaaaaa tgatgaaaga aaaagatatt gatttagctg
     6121 ctgaagtgag tgggcatatt ttctttaaac atagatattt tggttatgat gatggaattt
     6181 atgcattttt aagagccttg gagcttgttt ataaaggttt tgatctagaa agtatgatta
     6241 aagctttacc aaaactttat actacacctg aaattaaaat tcctgtaaat gaagaagaaa
     6301 aattcaaact tgtggaagaa tttcaaaaag agattgaaaa aggagcttta aaaggtgtta
     6361 aaagtctttg tgaaattgat ggagctagga tagattttgg cgatggatgg gctttacttc
     6421 gtgcatctaa taccagccct tatcttatca cacgctttga ggcaacatct ttagaaagag
     6481 caaaagagct tgaaagtatg gtatttactt tgtttaatga tataaaagct agatttaaga
     6541 attgatgaga taatattccg cgatttaatt tattttaaaa aggaattaaa aatgaaaaaa
     6601 atacttattt tacttacact atgtgctttt gcttttggtg caagtgaatg tgatagaaaa
     6661 atcgatcgta tcaataaaga aatcagtttt tctaaagcgc ataatgatac agctagaact
     6721 ttaagcttag agcttgcttt aaaacaagta caaaatgatt gtgctaaaga tcctatgttt
     6781 tatgataaaa agttagaagc taaaaaactt aaagaacaag aagtggaaaa aatcgaaaaa
     6841 gaacttgatg ctttaaaaga acaaaaagat tatatgagta aggctgagta taaagctaaa
     6901 aaagaagctt taaaagaaca aaaagagaaa atcaaaaaag aaattaaaga atatatcgat
     6961 aatctctaaa aattaaaaag actaataaat tttagccttt ttaaacccta ccttttttaa
     7021 gattttctaa taattcttct atattataaa ttcctctgtg ttctggtgtt aaaagatgga
     7081 ttaaaatatc accaagatca atcacgctcc attcttcact actatctatg tttaaaaatt
     7141 cctcaccttt ggctttaagt cgtgttttaa gctcatcgat caaagataga gcgtgtcttt
     7201 ctcctaaagt agctgcaata atgacatatt ttacaaagta ttcttgctcg ctcatgtcaa
     7261 tggttttgat attttcagct tttttttcat ctaaaatttt aacgattaaa tctattcttt
     7321 cttgcattat tgtcctttaa tttttgaaat tgtatcaatt tttttgtaat ttttcataat
     7381 atttttttac ttcatcttta atttcttcac aaacctcatt tgtatttaaa gtgtcgcgta
     7441 tgaaagaaga agcgattttt ttattggttt ttaaatcttt gaaattctta ggaattccta
     7501 tatcattgcg attagcaata acaaattcta ctaaagaatt gagtttttca aaatcatgcc
     7561 aaagatgaag tttttctaaa tgatctgcgc caattaaaag ataaaattta ctaggattat
     7621 aaagcttata aagatactta acactttcta tgctaggaac agggcgtttt tgcctgattt
     7681 caaaatcgca aatttcaact tttggcaaat gtccccaaag ttttttaacc cataagaatc
     7741 tttgcttttc atcagcacta aaactttgtt taaaaggatt gatataagta ggcataataa
     7801 taagtttatc aatatctaat tttcccaaag cctctaaaac aacgctatta tgaccattat
     7861 gcggtggatc aaaactgcca ccaaaaagtg ctatcttcat taaaatttta accttttttt
     7921 tgtagaatat tagcattata ttttgcaaaa ggaaattaaa tggctgtaaa agttgctata
     7981 aatggttttg gacgcatagg cagatgtgta gcaagaatca tcttagaaag aaatgatatt
     8041 gagcttgtgg cgataaatga tactacggat attgaactta caaaatacct ttttaaatac
     8101 gatacagtac atggtgaatt taaaggcagt gttgatagtg aaggcgatga tttagtggta
     8161 aatggtaaaa aaatcaaagt atttaaaagt cgcaatgtaa aagatcttga ctttgcaaaa
     8221 cacggtgtac aaattgtttt agagtgcaca ggagcgcatt taactatggc aaaatgtcaa
     8281 gaatttatag atatgggagt gcaaaaagtg atcatgagtg ctcctgcaaa agatgatact
     8341 cctacttatg ttttaggagt aaattcagaa ctttacaagg gtgaaagcat tatttctaat
     8401 gcaagttgta caacaaattg tttaggtcct gtttgtcgtg ttttacaaga taattttggt
     8461 atcgaaaaag gacttatgac aacaatacat gcttatacaa atggacaaag tattattgat
     8521 gctaaagcta aagataaacg ccgttctcgt gctgcagcac aaaatatcat tccaacttct
     8581 acaggcgcag caaaagctat gaagcttgtt atgcctgagc ttaatggcaa gcttcacgga
     8641 caaagtatgc gtgtgccagt gattgatgta tcaagcgtgg atttaaccgc acaactaagc
     8701 cgtaaagtta gcaaagatga aatcaatgaa gcttttagaa aagctgcaac tacaaattta
     8761 aaaggcattt taatggtaga tgatgatgaa agagtttcaa gcgattttat cacttgttct
     8821 tatggagcaa ttgtggcaag tgatttaact caagtgattg cggatgattt tatcaaggtg
     8881 attgcttggt atgataatga atggggctat tcaagtcgtc tagtagatat ggcagtatat
     8941 attgcaaata aggcttaatc atgagtgata ttatttctat aaaagacatt gatttagcta
     9001 agaaaaaagt ttttataaga tgtgatttta atgttcctca agatgatttt ttaaatatca
     9061 ctgatgatag acgcataaga tcagctattc ctacgataag atattgtttg gataatggtt
     9121 gtagtgtgat tttagcctct catttagggc gtccaaaaga aattagttcc aagtattctt
     9181 tagaacctgt tgctaagcgt cttgctagac ttttagataa agaaattatt atggcaaaag
     9241 atgttatcgg cgaagatgca aaaactaaag ctatgaattt aaaagcgggt gaaattttac
     9301 ttcttgaaaa tttgcgtttt gaaaaaggcg aaactaaaaa tgatgaaaat ttagccaaag
     9361 aacttgcttc tatggttcaa gtttatatca atgatgcttt tggagtatgc catagagcac
     9421 attctagtgt agaggcgatt actaaatttt ttgatgaaaa acacaaaggc gcaggatttt
     9481 tactccaaaa agaaattgat tttgcaagca atcttatcaa acatccagca cgtccttttg
     9541 tcgctgttgt tggaggttca aaggtaagtg gaaaacttca agcattgaca aatttattac
     9601 caaaggtaga taaattaatc ataggcggag gtatggcatt tactttttta aaagctttag
     9661 gttatgatat aggaaattca cttttagaag aagaactttt agaagaagct aataaaattc
     9721 ttaccaaggg taaaaattta ggagtgaaaa tttatcttcc agtagacgtt gtagccgctc
     9781 ctgcgtgctc acaagatgcg ccgatgaaat ttgttccagc gcaagaaatt ccaaatggtt
     9841 ggatgggttt agatatagga cctgcgagtg tgagactttt taaagaggtg atttctgatg
     9901 cgcaaacgat ttggtggaat ggacctatgg gtgtttttga aattgataaa ttttcaaaag
     9961 gtagcattaa aatgagtcat tatatcagcg aaggacatgc aacttctgtt gttggaggcg
    10021 gtgatacggc tgatgtggtt gcgcgcgcag gtgatgcaga tgaaatgact tttatttcca
    10081 ctggaggtgg tgcttctctt gaacttatag aaggtaaaga acttccaggc gtaaaagctt
    10141 taagatctaa ggaaaatgaa tgatctttgc tgcaaattta aaatgcaatc acacaagagc
    10201 aagttttaaa atttatgctg aaattttaaa taaaactatg ggagcaaaat gtgatgatat
    10261 tatcgttttc ccacctagtg tagcattttt agaaaatgaa aataacttca tacaaggagc
    10321 gcaaaatttt tatccttgtg ttaatggtgc ttttacaggc gagcttggaa aagagcattt
    10381 ggacgaattt gggatcaaat gtgttttaat cgggcattct gaaagaagag ctttaggaga
    10441 tgaagaattt attaaggcta aatttgattt tgctaaagag catggttata aaattgtttt
    10501 ttgtataggt gaaaatttag atacaaaaaa ttcaggcaag actttagagt ttttaaaaaa
    10561 acaacttgaa attattgatt taaattatga aaaactcatc atcgcttatg agcctattta
    10621 ttctatagga acgggagtga gcgcacaaag tacagatatc gctaaagtgc ttgaattttt
    10681 agcgagttta accaaggtac ctttgcttta tggtggaagt gtgaatgaaa ataatatcaa
    10741 agaaatttta agtgtaaatc attgtggtgg agttttgata ggctctgcag ctttaaaagt
    10801 agaaaatttt ataaaattaa tcaaaggata aaagatgatt atgaagggta aaaaaggcct
    10861 tattgtaggg gttgcgaata ataaatctat cgcttatggc atagcaaaag catgttttga
    10921 tcaaggagcc gagcttgctt ttactttttt aaatgatgct ttaaaaaaac gcgtagaacc
    10981 tatagcacaa gagtttaatt ctaattttgt ttatgagctt gatgtaaata ataacgagca
    11041 tttagattct atcgctgaaa aaatcaaaaa agatttaggc gagattgatt ttgtagtgca
    11101 tgcggttgct tttgctccaa aagaagcttt agaaaattct tttttagaaa cttcaaaaga
    11161 agcttttgat atagctatgc aaacttctgt gtattcttta ctttctttaa cacgtgcggt
    11221 tttacctatt ttaaaagata agggttcgat tttgacttta agttatcttg gtggggttaa
    11281 atatgtacct cattataatg ttatgggtgt agcaaaagct gcacttgaaa gttctgtgcg
    11341 ttatttagca agagatttag gagtaaaagg aatccgcgtt aatgctattt cagcaggtcc
    11401 tattaaaact ttagcagcaa gtggaatagg ggattttaga atgattttaa aatacaatga
    11461 aatcaattct cctttaaaac gcaatgttag tatagaagat gtaggaaatt cggctatgta
    11521 tttacttagc gatttggcaa atggtgttac aggtgaaata cattatgttg atgcaggata
    11581 taacatcatg ggtatgggtg atgttgaaaa aaatgaagaa gggcaaactg ttctttgttg
    11641 ggataatcaa aaaggataaa agatggcaaa gcttagcaat gaagaattaa aaaatatact
    11701 tgaagatcgc attaaaaaac ttgaaaattc tactttaaaa gaggataagg ttatcaatga
    11761 agaaagtgta aaaattcttg ctaagcactt atctttaggt aatgaaattc cagttcttgc
    11821 acaaagattt tttcaaatcg cacctaaaac aaagttagta tggcttcatc tttgtgaatg
    11881 tacagggtgt agtgagagtt tgttgcgttc tgagttgcca agttttgatg agcttatttt
    11941 tgattttttt tctttagaat atcatgaaac tttaatggca gcaaatggca ctaaggctga
    12001 agagctttta gaacatgttt tagaagaaga ttttatttta gcggttgaag gtggtgttgc
    12061 agccattgat accttttttc ttactatagg agcgcaagga gagagtggct atgaaatttt
    12121 agacaaacta gccgctaaag ccaaggctat ctttgcagtg ggtacttgtt caagttatgg
    12181 tggtattcaa gctgcttatc caaatcctag taaaacttgt ggtattagcg aagttttaag
    12241 tcagaaagta gtaaatatcc caggttgtcc tccaagtgat ataaatatca ttgcgacttt
    12301 aagttttttt gctttatttg gagttttgcc tgaacttgat gagcaaaatc gtcctgtgtg
    12361 ggcttatggt aaatgtttgc atgatatgtg tgaaagaaag gcgaaatttg aaagtgggat
    12421 ttttgctgaa cattttgacg atgaagctgc aaagaatgga gcttgtttat ttaagatagg
    12481 ttgtaaagga ccttatactt acaacaactg tcctaaagtg aaatttaatg ctaaaacttc
    12541 ttggccagtg gctgcaggac atggttgtat agcctgtagt gagaaaaatt tttgggatga
    12601 gtttgggaat tatgaaaaac ctatggcaaa tatttcttct tacgctaaac tttgcaatga
    12661 agagttaaaa caagaatttt ttctagaaga gcaaattaaa attttagaac aaatagattt
    12721 tgaatttgaa agcaatataa aacttatttt acaaaatata gctaaaaata aattaggtgc
    12781 ttcgcttgta gaaaattata aaaaatcctt tgagaaaaac tatgctttta tagaacaaaa
    12841 ttttgatgaa aatcctatgc cttcaaaaga tttttggaaa tatcttgaga tgagttttat
    12901 tttggttaaa ggcgcatttt taaaagataa gaatgatttt ttaattgcgg caaaaaatta
    12961 tgcttttaaa catgcaagtc cttatgattt taagttaaat atgaatgctg aaaaaccaaa
    13021 gcttgatgtg agtaaatctt ttcgtatgac tttaatctat ctttgcggtg ggcttgattt
    13081 tgaaggtatt gcttatagta ttttaaaagc ttttgaagat aatatcacta aaatttcatc
    13141 attaaaagca agttaattta ataaaatttt agcaatatga agccctataa aagctactat
    13201 ataagcactt gtgcaggtaa aaagaaagag aaagagagta tattttagct ttccactttc
    13261 ttttgaaaaa actatagttg ctgcaaagca gggattataa atcattacaa ataaaataaa
    13321 agccactgca cttggtatag gtatgttttt agcgataatt ccttttaaat cattatttgt
    13381 ttcatctaca tcttttccta gtgaataaag cacgcccata gttgagatca tcacttcttt
    13441 agcagccaaa ccactgatta aagatacgct taatttccaa tctaactcaa ggggtttaaa
    13501 aataggttct atgcctttgc caaattgtcc taaataactt tgttctatag ctctttcttg
    13561 agcattaaaa tcatttaaat tttcttcact ttttggaaaa ttactagcaa accatataag
    13621 caaagaggcc aaaagtatga aagttcctgc ttttttaaga tacattttgg ctttattata
    13681 aaccataaac caaattaaat gccaatttgg catacgatat tttggcattt ccataacaaa
    13741 aggttcatca agtccacgaa atgctgtcat tcttaaaaat tttgcagcaa aaagtcctaa
    13801 aatcgcacct aaaatataaa ttccaaaaag ataatttcct gctttttcac ttggaaaaaa
    13861 agcaccgata aaaagcacat atacaggaag tcttgccccg caactcataa aattgatcac
    13921 aaaaagagtt aaaagtctat ctcttttgtt cttaagagtg cgtgtagcca taaaagcagg
    13981 taccgaacaa ccaaaaccag tgattagcgg aataaagctt ttaccatgca aaccaaattt
    14041 atgtaaaatc ccatcaagta aaaaagctac tcttgacata tagcctgtgg tttctaaaag
    14101 agctatgcct aaaaataaaa tcattatatt aggcaaaaaa agtatcacag caccaacacc
    14161 tgcgataatc ccatcagcca aagctgaagc gataaaggta ttagaaatat tgtttttaac
    14221 aaattcacct aaggcattaa agcctgattc tatataatcc ataggaattt gccctaagct
    14281 aaaggtgagt tgaaataaaa gccacattaa aaataaaaat ataggtaagc caaagaattt
    14341 atggataagt aaggcatcga tttttttggt taaatttctt tcttcttttt tgtgtgtaat
    14401 aatttttttt gaaagttgat taataaaata taataaatct tctttttctg gacttttttc
    14461 tggacttttt tcgcaaagcg gagtgtaaaa ttgggatctt ggaataaatt tactttcaaa
    14521 taaaataata attttttgca gcaaaagttc taaattttct tttgtttttg ctgaaatttc
    14581 aacaacttga ctttgaaatt cttggcttaa aacagaagtg tcaagctcta taccttcttt
    14641 tttggcttca tcgcacatat ttaaagctaa aagcattttt ttattaaggc ttaaaagttc
    14701 tgcactaagg ataagattgc gttctaaatt ggtggcatct aaaacattaa caataacatc
    14761 atagtcattt tgatttaaaa aatgacgtgt gattttttct tcttcgctat atccatctaa
    14821 agaataagtt cctggtaaat caatgacttc aaattcatag tttttgtaaa aagtttttgc
    14881 acttgctttt tctatagtaa ctccgctaaa atttcctact ttcatattag ctttgcaaag
    14941 cgcattaata agaagacttt tgcctacatt aggctgacct acaagggcta ttttgatttt
    15001 tttcatataa gattcacttc tatggtttta gcttcatcag atcttaggat aacacaactt
    15061 gtatcaagtt ctaccattat ggtggcattt tttaaagagg agtgaatttt tttcaagttt
    15121 ttatttttaa taaatccaaa gcttaaaagt ctatttttga gttctttgtg agcgtttaaa
    15181 ttgacaataa tagctttttg tccatctttt aactcgttta aagtcattgt aattcctaaa
    15241 ttaataata
//
LOCUS       DARATF010000039        14960 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.039, whole genome shotgun sequence.
ACCESSION   DARATF010000039 DARATF010000000
VERSION     DARATF010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.039"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1083
                     /gene="nhaA"
                     /locus_tag="SB502_000940"
     CDS             <1..1083
                     /gene="nhaA"
                     /locus_tag="SB502_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEG0434394.1"
                     /translation="FLALLCKNSSLSVIYTDFFHANFTVGFDHFQISKSLDLWINDGL
                     IAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALGGMITPALIFIAINYSHDFAMKG
                     WAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAIFDDLGAIVIIALFYTDQLSALA
                     IIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAMLKSGVHATLAGVIISLFIPLDT
                     KNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIRDMHLGSVFSPVSLGIILGLFLG
                     KQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILTGIGFTMSLFIDGLAYKNSDIFE
                     HADKLAILIASFLSAIVGFIYLKIVK"
     gene            1080..2249
                     /gene="nhaA"
                     /locus_tag="SB502_000941"
     CDS             1080..2249
                     /gene="nhaA"
                     /locus_tag="SB502_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEG0434395.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIVAFVVAGLAILVMLILNLLGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIVTAFFIPMQTKNGEAFLEEIYESLKFWIAFIILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRS"
     gene            2258..2716
                     /locus_tag="SB502_000942"
     CDS             2258..2716
                     /locus_tag="SB502_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEG0434396.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEW
                     KKTPYVLGGTTKKGADCSGFTQSALTQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVF
                     FKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNSSYWKARYIGARRY"
     gene            2718..3461
                     /locus_tag="SB502_000943"
     CDS             2718..3461
                     /locus_tag="SB502_000943"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEG0434397.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDALRTKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKEKENID
                     LKNHKAKLHFYASSDVESLKNTAKIWLNL"
     gene            3471..4229
                     /gene="map"
                     /locus_tag="SB502_000944"
     CDS             3471..4229
                     /gene="map"
                     /locus_tag="SB502_000944"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEG0434398.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMA
                     EDYILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSPTDKALISCAKDALYHAIDIIRDGMRFKELSAALGEFIHARGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSIDGLNAAHYEHCVAVINGRAEILSMI"
     gene            complement(4601..5101)
                     /locus_tag="SB502_000945"
     CDS             complement(4601..5101)
                     /locus_tag="SB502_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434399.1"
                     /translation="MKSDLDIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELATAITMGETIDNTGIYNSTMD
                     FKNLFK"
     gene            complement(5157..5756)
                     /locus_tag="SB502_000946"
     CDS             complement(5157..5756)
                     /locus_tag="SB502_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEG0434400.1"
                     /translation="MLKQLFCILTFIFMLCGCSLRHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNANAPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIHSTYNAFQKALNKIGNEIVFWVNSNLS"
     gene            complement(5756..6646)
                     /locus_tag="SB502_000947"
     CDS             complement(5756..6646)
                     /locus_tag="SB502_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HEG0434401.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFVQLQGGSKNSKDLVSIQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQN
                     FNSSLKDIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            complement(6649..7371)
                     /locus_tag="SB502_000948"
     CDS             complement(6649..7371)
                     /locus_tag="SB502_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434402.1"
                     /translation="MVVKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGGSGSGKSVL
                     LKQMLMLEHFDGGEYEILGYKLKNISEEDALALRKKWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKRFME"
     gene            complement(7372..8481)
                     /locus_tag="SB502_000949"
     CDS             complement(7372..8481)
                     /locus_tag="SB502_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434403.1"
                     /translation="MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSH
                     KNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISII
                     GGMMIAKLNLDISFVEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI"
     gene            complement(8483..10381)
                     /gene="tkt"
                     /locus_tag="SB502_000950"
     CDS             complement(8483..10381)
                     /gene="tkt"
                     /locus_tag="SB502_000950"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEG0434404.1"
                     /translation="MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNDISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHSMGDFVEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFLLSRQKLRALNEP
                     VFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESTNELEKQGFACNVVSMPCFELFE
                     KQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSK
                     LVNFILSK"
     gene            complement(10391..11236)
                     /locus_tag="SB502_000951"
     CDS             complement(10391..11236)
                     /locus_tag="SB502_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEG0434405.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPKLLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDIHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            complement(11233..12327)
                     /locus_tag="SB502_000952"
     CDS             complement(11233..12327)
                     /locus_tag="SB502_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEG0434406.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNTKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFVIRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNT
                     SLVVTKIDPKSKASNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            complement(12324..12635)
                     /locus_tag="SB502_000953"
     CDS             complement(12324..12635)
                     /locus_tag="SB502_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEG0434407.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            complement(12639..13922)
                     /locus_tag="SB502_000954"
     CDS             complement(12639..13922)
                     /locus_tag="SB502_000954"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEG0434408.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALIQNRIEGLNFAAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISAIVTNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILSGFTKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            complement(13906..14457)
                     /locus_tag="SB502_000955"
     CDS             complement(13906..14457)
                     /locus_tag="SB502_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEG0434409.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLMGFKSEIKT"
     gene            complement(14444..14716)
                     /locus_tag="SB502_000956"
     CDS             complement(14444..14716)
                     /locus_tag="SB502_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEG0434410.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGIVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
BASE COUNT         4743 a         2301 c         2335 g         5581 t
ORIGIN      
        1 tttttagctt tattatgtaa aaattcttct ttaagtgtta tttatacaga tttttttcat
       61 gctaatttta cagtaggatt tgatcatttt caaatttcaa agtcgttgga tttatggata
      121 aatgatggtt tgatagctat attttttcta tgtatagggc ttgagttaaa atatgaaatt
      181 ttacgtgggc aacttaaaaa tataagagct gtatctttac ctatatttgg agctttaggg
      241 ggtatgatta ctccggcttt aatttttatt gctattaatt attctcatga ttttgctatg
      301 aaaggttggg caatacctac agcaactgat atagcttttg cagtgggtat tttgatgctt
      361 ttaggaaata aaattcctac aagtttaaag ctttttttac tttctttagc tatttttgat
      421 gatttgggtg ctattgttat tattgcttta ttttatacag atcagctttc agctttggcg
      481 attattattt gtttgttttg tatatttgct ctgcttttgt taaattatta tcacatcacc
      541 catctttctt tgtatgtgtt agtaggtgtt gtattgtgga tagctatgct taaaagtgga
      601 gtacatgcga ctttggctgg tgtgattatt tctttattta taccgcttga tacaaaaaat
      661 aaaaaacctt atttgcatga agttcttaag gatttaaatc cttgggtggt ttattttatt
      721 ttacctttat ttgcttttgc caatgctggg attgatatca gagatatgca tcttggttcg
      781 gtattctcgc ctgtaagcct tggaattatt ctaggattat ttttaggaaa gcaactaggt
      841 gtttttactt tttgttttat tgctatcaaa cttaagcttg caaaactacc tgaaaatatt
      901 aaatatggaa aattttatgg tatatgtatt ttaacaggca ttggttttac gatgagtttg
      961 tttattgatg gtttggctta taaaaatagt gatatttttg aacatgcgga taaacttgct
     1021 attttaatag caagtttttt aagtgccatt gttggtttta tttatcttaa gattgttaaa
     1081 tgaataatat agtacataaa ttaaaaactt tagttttaaa cgaggctttt ggtggtgttt
     1141 tacttatagt ttgtactttg cttgctttgc ttgtgcaaaa cgggtctttt agcgaacatt
     1201 atcgagaatt tctaaattta aaagtcggat ttagtgtagg tgaatttgag cttaacaagc
     1261 cttttttact ttggataaat gatgggctta tatctatatt tttctttgct atagggcttg
     1321 agcttaagaa ggaatttttg catggggatt ttaaaaatcc taaaaatatt gttttacctt
     1381 ttatggctgc tttagggggt atacttatac ctgcgatgtt gtttgctttg gtaaatatag
     1441 gagatgctta tactttaaaa ggttgggcta tacctacagc cacagataca gcgtttgcct
     1501 tagcgatttt aatgatgtgt ggcaagcaca ttccatcaag tttaaaaatt ttcttacttt
     1561 ctttggctat ttttgatgat gtgggtgcta ttttaattat agctattttt tatacgacaa
     1621 aattatcaat agttgctttt gtcgttgcag gacttgctat tttggtaatg cttattttaa
     1681 atcttttagg gataacaaga aagtcttttt attttatttg ctcagttatt ctttggatta
     1741 gtgttttaaa aagtggagta catgcaactt tagctggaat tgtaacagca ttttttatac
     1801 cgatgcaaac taaaaatggg gaagcatttt tagaagaaat ttatgaaagc ttaaaatttt
     1861 ggattgcttt tattatttta cctttatttg cttttgctaa cgctggagta aatttatcca
     1921 atatcgatat aggagcaatt ttttcaggtg taagtatagg tattttctta gggctttttg
     1981 tgggtaaaca agtgggtgta tttttatttt cttatttggc aatccgcttt aaatttgcag
     2041 ctttgcccca aggttcaaat ttgaaacaac tttatggggt ttgcatactt acaggaattg
     2101 gttttacaat gagtttgttt attgatggat tggcgtatga agttagtgat atttttaatt
     2161 atgcagataa cttagctatt cttatagcct cattttgttc tgggatttgg ggttttattt
     2221 atcttaaatt ctttactact cgatcttaag gggattgatg aggcatattt tttttattat
     2281 tacgattata ttttttataa gtggatgtag tttttatcag aatctaaact atcgtcctag
     2341 ttacaacaca aataaagaag caaggctcaa ggttattgca aatgaatgga aaaaaacccc
     2401 ttatgtttta ggtggaacta ctaaaaaagg tgctgattgt tcaggattta cacagagcgc
     2461 attaactcag cttaatatac gcatacctcg cactacaaaa actcaattag gttctggaag
     2521 aaaagtttct aaatcaaaat tgcaaacagg agatttggta ttttttaaga caggtagagg
     2581 gccaaatggt atgcatgttg gtatttatat gagcaaggga aaatttatac atttatctac
     2641 taaaggtgga gtaaaagaag tcgagctaaa tagttcttat tggaaggctc gttatatagg
     2701 agcaagaagg tattaaagtg aaaataggtg tatttgatag cggggtaggg gggcttagcg
     2761 ttttaaaatc tctttatgaa gctagacttt ttgatgaaat tatctattat ggagatactg
     2821 caagagttcc ttatggagta aaagataaag atactattat aaagttctgt cttgaagcat
     2881 tggaattttt tgaacaattt caaattgata tgcttatcat tgcatgtaat actgctagtg
     2941 cttatgcttt agatgcttta aggacaaaag cacattttcc agtatatggt gtaattgatg
     3001 caggggttga agcaacgata aaagctttgc atgataaaaa taaagaaatt ttagtcattg
     3061 caacaaaagc aaccattaaa tcagaagaat accaaaagcg tttattatcc caaggatata
     3121 caaatataaa tgctttagct acagggcttt ttgtgcctat ggttgaagaa ggtatttttg
     3181 aaggagattt tttgcaaagt gctatggagt attattttaa aaatatcaca actccagatg
     3241 ctttgatact cgcttgcact catttccctt tactaggtcg ttctttaagt aagtattttg
     3301 gtgataaaac aaaattaatt cattcaggag atgctatagt tgaatttctt aaagaaaaag
     3361 aaaatataga tttgaaaaat cataaagcaa aattacattt ttatgcttca agcgatgttg
     3421 aatctttaaa aaatactgct aaaatttggc taaatttata aggaaataaa atgatagaat
     3481 tgaaaaaacc agatgaaata gaaaaattaa gaatagcaaa tcaaattgta gcaaaaactt
     3541 taaatttttt agagaatgaa attaaaatag gaatgagctt aaaacaaatc gataaaatgg
     3601 cagaagatta tattttaagc cttggcgcca agccatcatt taagggactt tatggttttc
     3661 caggtgccat ttgcacatct ttaaatcaag tttgtatcca tggaattcca gatgataaaa
     3721 ttatcaaaga gggtgatatt ttaggtcttg atgtgggaag tttgattgat gggtattatg
     3781 gggatgcagc aagaactatt gctataggag aagtttcacc cactgataaa gctttaatct
     3841 cttgtgctaa agacgcgtta tatcatgcta tagatattat tcgtgatgga atgcgtttta
     3901 aggaactttc agctgcttta ggcgaattta tccatgcaag aggttttgtc ccgcttcgtg
     3961 gatattgcgg gcatggtata ggacgaaagc cccatggaga gcctgaaatt ttaaactatt
     4021 tagaaaaagg tgcgagtgca aaaagtggcc ctaaaattaa aaatggaatg gtgttttgca
     4081 tagagcctat gatatgccaa aaagatggaa caccaaagca ttataatgga aaatgggatg
     4141 ctggaagtat tgatgggctg aatgcggctc attatgaaca ttgtgttgcc gtgattaatg
     4201 ggcgtgctga aattctttct atgatatgat attaaattat aaaaataata tttttttctt
     4261 aaaatcctaa aaatttaaaa ttttttaaat aatattgtag taatattctt taataattta
     4321 agttactaaa tgatattttt atagcagatt aagtgttttt agaataaaat gtcacatcgt
     4381 attaaactaa aacataaata tggtttatat aatttaataa aagttgttaa attatctaaa
     4441 tatttatttt ggtttaaaga gatcttttaa gatctctttt gggttaggct atttccctcc
     4501 cctttttatt cgtagcctaa ctctctttta agagtttgga aaatctcttt aagctaaaat
     4561 atattatatt ttcttaaaga gaacaaacga ttactatttc ttatttaaat aaatttttaa
     4621 aatccattgt agagttataa attccagtat tatctatagt ttcgcccatg gtgattgcgg
     4681 ttgctaactc tgatagaatg atttttattt catctctttt atcttgtata taggccaata
     4741 caccttcgta attacttgtt tgaagaatta aaagtggatt agcaatttca aattcaaaaa
     4801 gttttttacc aacataaaca ttgaaaatat ttccaaaaag agctgttccc atgaaagagc
     4861 agttttgtat aagttgtgat gctgtggcat caagagttct tttttgcata tcatctgaat
     4921 tttcatctat tctttctaga atactttttt ctattttttt taaagacata tcaagcactt
     4981 gaagtgctcc tataaaatca tttgcatcat tgatttgaga gcaaatttga tttgctttaa
     5041 attcattcac gccttgaatt tcacctaagt gttttttaaa tatatctaaa tcacttttca
     5101 ttgtttacct ttcaaaaata ttgctcaata tttaaaaagc aaaaagtgtt cctaaattag
     5161 gataagttag aatttaccca aaaaacaatc tcattgccaa ttttattcaa ggctttttga
     5221 aaagcattat aagtagagtg gatgtctttt ttttctattt tttctttagt attgaaaatt
     5281 ttatgagcta ttatttgatt gttttcaaga tttatgaaat ttacgcttat agaaatttga
     5341 gcgtagtttt cattgttatt aagaatttgc tcaaaagagt taatcctgct ttcaagagca
     5401 taatccgcac ttaaagagct tgttgaagaa agtagggttg taaaaatatt gctttgttca
     5461 aattttgaca aaattaaaaa agaataaaga ttgcttggta aatctcccca gaaataatgt
     5521 gcgtatttgt tgctaaaacc attatctata taaacaatag ctcgcgagtt taaatacaaa
     5581 ggtgcatttg cattgcgaat tttaagaatt ttaccggttt ttttaaaaaa aatatttgaa
     5641 tctattcctt catcttttaa tatgatattt tcatttttgt tgatggtttc gtgtcttaaa
     5701 gagcatccgc ataacataaa aataaaagtc aaaatacaga ataattgctt tagcattatt
     5761 tttctcctgg tcctagttta ggtttggttt ctttaaaaat caaatcagca gggctgtttt
     5821 gtaaattttc tattagaata ttgctttcaa ttaaaactcg tttaaaaagc tctaaatttt
     5881 gcatcaaaga tgctttaata tcatcataag tgtttaattt ttcatcagct ttttttatga
     5941 aattttttaa aatcatcgta ctttctttta tgtctttaag actggagttg aaattttgcg
     6001 cactaaggct tatattatca gccatttttc ctatttttaa acttgcgttt gaaagattaa
     6061 ggcttaaatt tttagaatta gcgtttaaat ttgcacttaa ttctgctaga ttttgcaaaa
     6121 ggatttctag atttttaaga tttttttcgc ttaaaagttc ttttgattta tcatcggccg
     6181 ttttaactaa agaaaaaata tgttcacttt gtctatctat agttgctaaa aaactttctt
     6241 taaaaggaat gactggaagt tttccctgta tagatactaa atctttgcta tttttacttc
     6301 cgccttgaag ttggacaaat ttaagtcctg tgataccttg aagttgcaaa gtagcaaaag
     6361 tatcttcttt tataggggtg ttatttttga ccttgatgcg tatgttaacg ccgagttcat
     6421 cttgattgta aatgctgatt tcttctacgc tacctacttc cacgcccaaa agccttacgg
     6481 gtgcttttat gccaagtcct gcaacggatt cttgtgtgtg aatttcataa tacttaaaac
     6541 tttcttcttt agagtatcca ccaagccaaa gtatgaaacc aaggcttgca aaaaatactc
     6601 caaaaacaaa aagtcctaca aaaaaataat ttgctctatt ttccactttt actccataaa
     6661 tcttttaaaa agtcgttcat tttgcaggcg taattcttca taagtaccgc aaaatccaac
     6721 ttttttattt tctaaaatga taaaacgatc gagtaaattt ttcatacttt ctttatcatg
     6781 tgtaaccaaa atgatattta aatcaaaact tttttttaac tctaaaacca aatcgtcaaa
     6841 ttcacgacta ctatgagggt caagtcctga agtaggttca tctaaaaaaa gcaatttact
     6901 atcaagtgct aaagctctag caattgccac tcttttttgc ataccgccac taagttcact
     6961 tggaaattgt tttaaaacac tttcgtttaa gcctaccatt tttagcttca ttaaaaccag
     7021 ttcttgtatg ctattttcat ctaaatgagt gtattctttt aaaggaatgg cgatattttc
     7081 ataaacatta aaaaagctaa aaagtgcagc aaactgaaaa accacacccc attttttacg
     7141 caaagcaagt gcatcttctt cgctgatatt tttaagttta tagcctaaaa tttcatattc
     7201 tccaccatca aaatgttcaa gcataagcat ttgttttaaa aggacggatt ttccacttcc
     7261 actacctcct aaaataccaa aaatttcatt ttttttgatt tcaaaactta cgccatcatg
     7321 gacaattttt tctccaaatt ttgtaatgat attttgcgct ttaacaacca tttaaattcc
     7381 tgcagaagtt aaaacaacag agaataaagc atcaaaagct atcacccaaa aaatagcatt
     7441 tacaacgctt tttgttgtat aaattcctat gctttgtgta gtgtttttta cctcaaaacc
     7501 acgaaaacaa gcaataagtc ctattaaaaa tccaaaaata ggtgcttttg caagtcctat
     7561 aaagatatgt tttatatcga cagcttctct aaagcgtctt aaaaattcga caaaagaaat
     7621 atcaagattt aattttgcaa tcatcattcc gcctataata ctgattgcat cgctaatggc
     7681 aacgattaaa ggcatggcca ctaccaaagc catgacacgt ggaataataa taaattcaaa
     7741 agaacgaaaa cccatagtat tcatagctgc aatttcatca gtaattttca tcactccaat
     7801 ttgtgcggta taagaacttg cacttcttcc cgcgattact atggcagcga ttaaaggtgc
     7861 aagttctcta gtggctgaaa ttcccatcaa atccactatg aaaatattgg ctccaaattg
     7921 tgcgagttga taagcagcct gataggctaa aaccactcct actaaaagag cggttaaaat
     7981 aactataggt aaggctttaa aagcagaatt ttctatatga tataaaaaag caataaagcg
     8041 aaaattttta ggatttttaa ggcataaaaa aagacttgtg aaaaaagctc ctgtgaaatt
     8101 gatgaatttt cttaaaattt ttaaaagttc taaacttaat tttccaagat cgataaagta
     8161 ttcactgaaa tttttatgtg atttttttgt tttgcttagt ctttggtagt ttttttcaca
     8221 aagttcaaaa agggtttgaa agcgtgaatt taagccttct ttggtgattt taatattttt
     8281 atctttaaga tcattttcca aagcaaggaa aaatctcact ccagcggtat cgattgcttt
     8341 tagatcttta aaatcaaaaa tcacttcctt gctttggatc aaagctaaaa aatcttttat
     8401 ttttaactta taaatgcttg ttttatccca aattccaaag ataaaaagag tgttattttg
     8461 aaatttgaaa tttgtattca ttttatttgc taaggataaa atttacaagc tttgaaacgc
     8521 taaatccaaa gtgttcaaac acatctttgt ctttgccgct ttctccaaaa ctttctatgc
     8581 catacacttt atggcaaaat ttataaagtt cattagaatg tgctgcttca acacctataa
     8641 cttcaccttt taacaatctt tcttgataag ctttatcttg tttttcaaaa agttcaaaac
     8701 aaggcatgga aacaacatta caagcaaaac cttgtttttc aagttcgttt gtactttcta
     8761 aacaaagcca aacttcactt ccacttgcta aaagtgtaaa tttagcctct ttgctttctt
     8821 tgagtaaata cgctccattt tttacatctc caaaaacagg ttcatttaga gctctgagtt
     8881 tttggcgtga aagcagaaaa gcactcggaa tatcagcatt tagggctatt tgccaagctt
     8941 tgacattttc caccccatca gcaggtctaa aggttaaaaa atttggcata gctctaaaag
     9001 tgctaagttg ttctataggt tggtgtgttg gtccatcttc gcccacgcct atgctatcgt
     9061 gtgtgaaaat gaaaaaatgt ttgattttca ttagagctgc tattcttgcg gcaggtttta
     9121 agtactcgct aaagatgaaa aaagttgccg aaaatggtaa gaaaattcca tatcttgcaa
     9181 aagcattgtt aatcgctgcc atagcgtgtt ctctgatacc aaaatggata tttttacctt
     9241 ctacaaagtc tcccatactg tgaagttctg ttttattcga agggcctaag tctgcacttc
     9301 cacctaaaaa tccttctaaa tttttagcta aaacatttaa aatttcacca ttactatctc
     9361 ttgtagcaag atcttttcct ttaaaatcag gataagctat cttgttaaaa tcaggattta
     9421 atagcctttc taaaagttct tttttagcac ttttttcaag cttatctttc cattttgctt
     9481 cttctaaatc cccaagttct acagcacttt caaagcggat tttgcttgct tgtgggatat
     9541 gaaaactgat atttggatca aaacctgctt gttctttggc ttttttaatc acttcttcac
     9601 ccaaaggtgc gccatggctt ttatgactgc cttcaagctc tcctgcaccc tttgctatag
     9661 ttgtttttgc gatgataaga caaggttttg tggatttttt agcttgttct aaggctttat
     9721 taatttcttc ataatcgtgt ccatttatac ttaaaacttc aaatccttgt gcttcaaaac
     9781 gcatttttac attttcgtta aaggctaaac ctacatcgcc ttctatggag atatcgttgc
     9841 tatcataaat aagtatgaaa ttatcaagtt tgtgaagtcc tgctaaagaa caagcttcat
     9901 aagaaatgcc ttcttgcaaa tctccatctc cgcaaagaca ataaatttta tgatcgatta
     9961 aatcactacc tagtaaattt tgtgcttttt ttgccgccat agcaaagcct acagcattgg
    10021 caacgccttg tcctaaaggg cctgtagcaa tctctactcc aagagttgaa atttcagggt
    10081 gtcctggggt tttagaatga agttggcgga aatttttaag atcttctagg cttaaatcat
    10141 agccacttaa atgtaaaaaa ctataaagta aagcacttgc atgtccacct gaaaatacaa
    10201 gtctatcacg gtttagccaa gttggatttt tgggattgtg ttttaaatga taacttaaaa
    10261 cacttaaaat atctgctaag cccaaaggtg cacctgggtg tcctgagttt gctttttgca
    10321 ccatatcggc acttaaaaat cttagagtat ttgcctgttc ttgtaaaatt tgaatgtcca
    10381 ttttttgcct ttataagtat tgaattatta aattttgtat catttgtgcg agtttttcat
    10441 taagtttttc taaatcttgt tcgcattcac taagaagatt ttcttttgtt tttatggctt
    10501 gttcaagtcc aagcaaattg acaaaagaat ttttatgaat atcgttatta gtaggctttc
    10561 cgctttgttc ttgacttgtg gttacatcga taatatcatc attgatttga aaaatcagtc
    10621 ctagttttaa accaagtttg taaatttgat tgctttcttc gttgttaagt tcgcaaattt
    10681 cacaacccat ttttaaagct gcagcgatta atcttgcggt tttatgtgtg tgtaaaaact
    10741 caagttcatt taaactcagt cttttgtctt caaaaaaaca atcaatagct tgtcctatga
    10801 ccattccatt aagtcctgca ttaaaggcaa gggttttgat gagtttgatt ttgatttcat
    10861 cttttaaatg agcatgactt agaactaaaa aagcttcagt atttaaagca tcacccacta
    10921 agatggctgt agtttcatcg tagcttttgt gtaaggttgg aattcctcgt ctaaaatccg
    10981 cattatccat agcgggtaaa tcatcgtgta tgagtgaata agtatggata aattccaaag
    11041 ctaaagccac atctaaagct tgatttaaaa gtttaggttt attgctttgt actacgctta
    11101 aaagcaattg tgcacgaaaa tgcttccctc ctgcttttag cataagagct aaagcttcat
    11161 taaaaaaagg atgaaagctt tcgactttag gtagattttt ttctaagtga tggataaaaa
    11221 gttcttttaa attcacttag taagccttat gaaaaattga aatttaccat cgccacctga
    11281 gttggcattt ccgcctagtt cattgttgaa atttgataaa ggtaatttag tacttttgcg
    11341 ttcaattaag atgctaaagt cattaccagc gcttaaaata ttttgtaatt ctttaaaatt
    11401 atttaaaata atattattaa cgcgtaaaat tttatctcct accataaatc ctgcatttga
    11461 tgcttttgat tttggatcta ttttggttac aacaagacta gtattaaccg ttaaaccaag
    11521 attgcttgtg aaatttgtaa tttttggttt tggtttagaa tcaggaaggt taaatttgct
    11581 caaatctttt gcaaaaactt cagtagaaat atttaaatcc atattatcac gtaacacttg
    11641 aaaataaaga gtgcttccgc gatctgcaaa aagaattttt tcattgagtt ttcttaaatc
    11701 attggcgggt aaaccatcaa cacttataac ttgatcgttg attaaaaatt gtggattttt
    11761 tcttacattg ttaacataaa ttttattttc tcgaataaca aaatcaacgc caatatcccc
    11821 ccaataaaca tcgttatatt tcataaaatg ttttaaatag cgattgccta taaaagagct
    11881 attatttaaa gcaatcccca tcatttcaca gcacggagtc cctaaaagtc ctattttaga
    11941 attaaaatca agttgatctt tttcatcaat attttgagct aaatacttaa tatgtcctat
    12001 atagggttta ttaggatccc aaattccaac ccaatcatta cgagtaagtt tttcttcatc
    12061 acccatagga gtagggatta ggctaaagtc agttcttaca aggtataaat ttaaaaatgg
    12121 atcgtatttt acatatttgt taagcttagt attaggctgt tttaacacag caagtaaatt
    12181 ttcactgagt gcaaaagctg gcattccttc atagttaagc atgcttgcct tatttctttc
    12241 ataacctgct aaaaaatctt caaatttagg tctttctata ccaaaagaca aagtaaaaag
    12301 catacaaata attaaaattt ttttcataat ttcatacctc caaaaccgcc taaaacatca
    12361 ttcgccatac ttgaacgatt ttgcgcaacc atagccaaaa catcattaat tgcagaaata
    12421 agtaaaattt gcaaggattc tttatcttca agtaaagaat catcaatgct aacatcgata
    12481 atttcaccct ttccattggc acttacttta acaagtcctg ctccactttt ggcactaaat
    12541 tcacgatttg caagttctag ttctatattt tttgcttttt cttgaacttg atttaaaagt
    12601 tctcccattt tagaaaaatc catattttca aacattgatt atccttgatt ttttaaaatt
    12661 tcattaacaa ctactttatc actaaaagga tattttatcc ctttaatttc ttgagtagtt
    12721 tcatcacctt tgcctaaaat aacgactaaa tcgtcatttt cttttagttc taaagctttt
    12781 tttatagctt cttttctatc ttctatcatt aaaacttttt cttttttagt aaagcctgat
    12841 aaaatttctt ccatgatggt ttttggttct tcactgcgtg gattgtcact tgtaatgata
    12901 gcaatttttg caaaatgttc gacgattttt cccattaaag ggcgtttggt tttatctcta
    12961 tctccacctg ctccaaaaac aacgatgagt tttttatttt taagagtgtc aagcactttt
    13021 tcaatgccat caggcgtatg agcaaaatct acaatcacgc cttttgctac ttgttctacc
    13081 ctgccacaaa ccccgccaaa tccactgata gctttttcca agtcttttaa atcaggcttt
    13141 acgagttcat tcacacaagc actagcaact agaagattgt aaagattaaa aagtcctagc
    13201 aagggcgagt ctatgtgaaa agtttgattt ttatttgtta caatagcact aatgccttct
    13261 tctaaagaat aagctttgat ttgatataaa gcaggatttt ctatgccata agtaaaagca
    13321 ttacgcacat taaatttaat agccaaagca tctttgttga taaattttaa actctcatcg
    13381 gtaaaaaaaa gttcttttgc ttctttataa ttttcaaaag taccatgaaa atctaaatga
    13441 tcttgagtga tattggtaaa aattttagca gcaaaattta agccttcgat gcggttttga
    13501 attaaggcgt gtgagcttac ttccatgatg aaaaaatcac attttttttg agtggctatt
    13561 tgtaggtatt ctaaggtttt aagaataggg gaggtggtta aggatttttc atcgatttgt
    13621 tcatcgttga taaaagctcc tcttgtccca caaagcccac acttataacc taaatccaat
    13681 aagatagaat aaatcgctgc tgcggttgtg gttttgccat tggttcctgt gattcctatg
    13741 atttgaatct tttcatcgat ttttaaaagt tttttacact catttacatc aatgattttt
    13801 gcaccttttt ctaaggcttg agcgtgaaat ttagcatttt gtgtggtttg caaaaaaaag
    13861 cattcttttt cacactctaa ggtgttatct gtaatgaatg aattttcaag ttttaatttc
    13921 acttttaaat cccatgagtt tttcttggag tttgataaat ctatcatttg cccaaaaatg
    13981 aggcataaca ttttctatgt aatttaaagt catatcttta tagccattat caagtaattt
    14041 ttccaaaaaa tctaaaaaat catcacgatt atcaataact aacttagtgc tgttaatgat
    14101 attttcaaaa cttttttgaa agccaagttc ttcttcgctt tttaaaaaat cttgataatt
    14161 taacgcatgc ccatcttcaa attcgttttc ctgtttgttt tcttgttttt taaattcaat
    14221 tgtacttaaa atttcttcta agtctttatc aatgctagag attttgtaat gttctatata
    14281 aaaatcaaaa agtaaagaag cttctttagg agattttaaa gcaagatcac aaaggcagat
    14341 aaaatttagc aagcgtttat ttttgcgttt ttcataagcc atagaaaaat acatttttgc
    14401 agttttaaaa tctttcttgt aaaaatgttc aattccaagt tttttataat tttgcaaatt
    14461 cgtctgctcc gccgtttaaa ttgattatag tgatttctgg atgaatatca atcttaagtt
    14521 gcctttcaag accatatttt agcgttgttc cactcgatgc acagccttta caagctccta
    14581 ttaaatggac ataaacaatc ccatttttaa ttcctaaaaa ttcaagccct ccgccatcac
    14641 gttcaagcat aggcaagctc ttttctaaac ttgctttaac aggatttata agctcttcat
    14701 cactaaaagg catcataatt tatccttaaa aatttttata tactttagcg tgattgtgtt
    14761 taaaaaaagg taaattaagg cttgaaattt aaataaatta aaaaggttcg tcattatttt
    14821 gtatgctaaa tcctaaatca taagctgtaa agtttttgtt accaaaaatt ccatttaagt
    14881 ttctaaatga ttgttgcaga atttcttcgt ttttttcata ttttaagaag cttaaatatt
    14941 cttttaaaaa attatttaat
//
LOCUS       DARATF010000040        14957 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.040, whole genome shotgun sequence.
ACCESSION   DARATF010000040 DARATF010000000
VERSION     DARATF010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14957
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.040"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(1..450)
                     /locus_tag="SB502_000957"
     CDS             complement(1..450)
                     /locus_tag="SB502_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEG0434411.1"
                     /translation="MQVNIFCIQKNDEFKTCSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(452..1294)
                     /locus_tag="SB502_000958"
     CDS             complement(452..1294)
                     /locus_tag="SB502_000958"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEG0434412.1"
                     /translation="MNFADIFSKIRRQQPSIKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITSKTPLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(1303..2025)
                     /locus_tag="SB502_000959"
     CDS             complement(1303..2025)
                     /locus_tag="SB502_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEG0434413.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDKNQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKASPKQMILDPLDGSSNFVSKIPFYGTSIALM
                     EKDQAKSAFVCNLVSQEIFAFKNNQAFKSNLSDPKYSPLTPNLFPKIGIVEKISFYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTAAALAIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(2025..4244)
                     /gene="bamA"
                     /locus_tag="SB502_000960"
     CDS             complement(2025..4244)
                     /gene="bamA"
                     /locus_tag="SB502_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEG0434414.1"
                     /translation="MKKHLISICALVAMANAATIKDIKFIGLNHLSNTSAINITGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNGILEIIVTEKPTIAKVTITGIASNDRK
                     QVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITVGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNNTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEIGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            4321..5148
                     /locus_tag="SB502_000961"
     CDS             4321..5148
                     /locus_tag="SB502_000961"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEG0434415.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALQL
                     GLIHELIEFKDLALCDMIFVATPVDAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            5228..6601
                     /locus_tag="SB502_000962"
     CDS             5228..6601
                     /locus_tag="SB502_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0434416.1"
                     /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGKIFKATSYVKEGYYAALIAWDARDEEFRAFVIATDKA
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            6601..7485
                     /locus_tag="SB502_000963"
     CDS             6601..7485
                     /locus_tag="SB502_000963"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEG0434417.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHRLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            7524..7925
                     /locus_tag="SB502_000964"
     CDS             7524..7925
                     /locus_tag="SB502_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HEG0434418.1"
                     /translation="MIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPVEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            7934..8812
                     /locus_tag="SB502_000965"
     CDS             7934..8812
                     /locus_tag="SB502_000965"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEG0434419.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKECILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            8837..9094
                     /locus_tag="SB502_000966"
     CDS             8837..9094
                     /locus_tag="SB502_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEG0434420.1"
                     /translation="MKKHIPIRMCIACKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEREDKVLQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            9081..11696
                     /gene="infB"
                     /locus_tag="SB502_000967"
     CDS             9081..11696
                     /gene="infB"
                     /locus_tag="SB502_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEG0434421.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKIEKENAKEEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVK
                     NSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDI
                     SLDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGFEGGIQRRSRKKPSK
                     KIEKKEVEEVGSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIE
                     ILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYI
                     RKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVV
                     AADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGS
                     YEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATII
                     VQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIA
                     VKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSL
                     EALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERA
                     KDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCI
                     VTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVG
                     DYIESYKEVEEQASL"
     gene            11693..12055
                     /gene="rbfA"
                     /locus_tag="SB502_000968"
     CDS             11693..12055
                     /gene="rbfA"
                     /locus_tag="SB502_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEG0434422.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            12045..12467
                     /gene="rimP"
                     /locus_tag="SB502_000969"
     CDS             12045..12467
                     /gene="rimP"
                     /locus_tag="SB502_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEG0434423.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCA
                     RLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAKSIGELVKITTNEKEKFE
                     AKIIAVDDENITLENLENKEKTTINFNDIKKARTFIQW"
     gene            12523..14118
                     /locus_tag="SB502_000970"
     CDS             12523..14118
                     /locus_tag="SB502_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0434424.1"
                     /translation="MLENKCDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQEGKFIDEFHTKSQGDKWTSSILNYLKTMSKDGEIFYRYYKNCKFFAIPKNTFSKDD
                     FKIIKDNINNNISLNQILYGSPGTGKTYHTIDKALEILGENLESRDEKKAKFDEYVKN
                     GQIVFTTFHQSYGYEEFVEGIKPHIDSEENSKEIKYEIKDGIFKELCEKALENRDSIK
                     NFNFYIDKLKEKVKIDDNNPEKYFELPNTKYSIQYRNGKTFRIKFDDMSKNHKDYPVS
                     IDNIEKLYKTSNIDEIYNSAYVRAILNYLKLQGLEDYKEKDEKVNLPYIIIIDEINRG
                     NVSKIFGELITLIEASKRIGEKEELKVTLPYSGKEFGVPKNVYIIGTMNTADRSITSL
                     DTALRRRFEFIEMMPDVSKLSIDCEGINLQELLKAINTRIEYLLDREKTIGHAFFISV
                     ENLESLKKVFKNRIIPLLQEYFYNDYALIDAVLNKNGMLEISVENKDYLKNMTEFIES
                     DKIVYKFSDSNNWNKDTFIKIYK"
     gene            14118..>14957
                     /locus_tag="SB502_000971"
     CDS             14118..>14957
                     /locus_tag="SB502_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEG0434425.1"
                     /translation="MKTSNTFSIIEHQAFSKEDLKEIFKEKAEGFYKELEDFAKNNEN
                     LLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYEL
                     DNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFL
                     DEFDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNLIHKERFFTSNDEFVLDIAP
                     NRLIKSTLNFLKSKTSLNKFRLIKAMQMLDEVEFSKNYEKDFSYKISRHFDYYENLLL
                     WCKI"
BASE COUNT         5533 a         1917 c         2605 g         4902 t
ORIGIN      
        1 ctatttgtga taagggtgat tgttgttgat gcaaaatgca cgataaattt gttctaaaag
       61 taaggtttta acaaattgat gtgctaaagt aagtttgctt aatgatagtc taaaatccaa
      121 actttgatta aattcttctc ttaaaccata agcacctcct ataaaaaaac ttaattcatt
      181 tttatcttgg atgagttttg caaattctat acttgtaaga tctttccctt tttcatcaag
      241 agcgatacaa tagccttttt tataaggcat aaaagcttct tcatagcttt tttttgcttc
      301 tatggcattt aaattttgag ctaaggctat ttttttatta aaaacattta tttcttttaa
      361 agtggcgtat ttggagatga gtttagagta tttctcacta caagttttaa attcatcatt
      421 tttttgaata caaaagatat taacttgcaa attattttcc actaaaaaat tttagtacat
      481 cgctaagata ttgtttttgc tctcctcttt caactatggc atctataagt ccatgttcta
      541 acaagaactc tgctttttga aaaccttcag gcaaatctgc tcctatagtt tgtttgataa
      601 ctcttgcacc agcaaaacct accaaagctt caggttcagc gatgattaaa tctccaagcc
      661 aagcaaaaga agcacttacc ccacccatag taggatcagt taaaatgcta atataaggaa
      721 gtttttcttt gctaagaagt ttaagtgcgg cactagtttt gctcatttgc atcaaagaat
      781 aagtgctttc ttgcattcta gctccaccac ttgcacttac gatgacaaga ggggttttac
      841 ttgtgatggc tctttgtata gctctaacga ttttttctcc ttcaacagaa cctaaagatc
      901 cgcccataaa agaaaaatca aatacaacaa gttgggtttt taaaccattg atttcacatt
      961 ctccactgat gacagaactt tttctacctg ttttactttc accttcgcta aggcgttttt
     1021 tataggattt gctatcaaca aattttaaag gatctatagc ttctaaattt gcatcatact
     1081 caataaaact gccttcatcg cttaaaagtt taatacgttc atcagctgaa attctcatgt
     1141 gataattgca tttaggacaa acattaaaac aagattctat ttctttataa tacatcaaag
     1201 catgacaact ttggcatttt acccagtgat ttggagcttc tttaatacta ggttgttgtc
     1261 ttcttatttt tgaaaaaata tctgcaaaat tcatatattc acctaattat tttttaaaaa
     1321 ttctaagatt atatcaaaaa tttttttgtc ttggcttagg agaaggaaat tttcattttt
     1381 ttctatatat aaattttgat gaattgctaa agcagctgct gtatcaaaaa ttcgtgtttt
     1441 tccaagaatt aatacaaaac taaaatacga agcataagca agacttaagg ctgttgcacc
     1501 caaagagcga aattttaatt gattttttgt taaaaaatcg agaagttctg gataaaatga
     1561 aattttttca actataccta ttttaggaaa tagattaggt gttaagggtg agtattttgg
     1621 atcggaaaga ttagatttaa aagcttgatt gttcttaaaa gcaaaaattt cttgactgac
     1681 aagattgcaa acaaaagcac tttttgcctg atctttttcc ataagagcta tagaagtccc
     1741 ataaaatggt attttagaaa caaaatttga acttccatcc aaaggatcaa gaatcatttg
     1801 ttttgggcta gcttttccga tcaatccgct ttcttcagaa aaaatttgtc caaaacaact
     1861 aagatatttt atgaaaattt gttcacattt taagtcaagc tcatagcctt gatttttatc
     1921 atagcctaat ttagagcaaa gtttaagatc attttgtggg atattgttta gatacttgcg
     1981 tatttgcaaa tttgcattca agcaagcatc taaaaattct ttcattaaaa gcgtgttcca
     2041 agattaaatt caaaactatt agtatcatca ccttttttat cattaagagg tttggcaaat
     2101 acaagttgta aaggtccaat aggtgtaatc cattcaatgc ctatacctgt actcattctt
     2161 tttatttcat ctaaattttt acgccctatc ataccataat caaaaaacac gctaccacga
     2221 agtttgattc tatcaatcaa aggaaaacta agttctacgg aattggcaaa agctatggtt
     2281 ccgcctattt catctcccca ttgattttta ggacttactg ttctgctttc aaaaccgcgt
     2341 atcgatctaa taccacctaa ataaattctt tggttaattg gtaaataacc ttcatcccat
     2401 actttataaa aactcgcttt atagcgataa ataagatcat atcctatata gtcttgcaaa
     2461 ccttgataaa agttaaattt agagcttgat gaaataaatt cttgatctcc gccaagtcca
     2521 gcgtattcta aactagttga agcaataata cctgatcgtg gcagataata atcatctgta
     2581 ttgttaaagg tgattgctgg agttatagag cttttaatac ttttgccaag ttcatatcct
     2641 gttcttaaaa gagttggact taagtgatat atatcgcttt gttcaagatt ataagttaag
     2701 cttacattat agtatcttgc aaattggcgt ccaactgtta tatcaaagcc gtaatttttt
     2761 tctgaataat tatcccattc atagtcattt gaataaagtg ttccacccag actatattga
     2821 ctatcaagaa cgcgtggatt tacgagacta atccttcccg ataaagtatc atcgctttta
     2881 tctacgctta cagagctttt tattcctgaa ccaaagatat ttgtatccga taaagaagcg
     2941 ttaagcaaaa taccatcgct tgatccatag ccaatgcctc cagaaatagc tcctgtagaa
     3001 gcttctttaa catcaacaat caaatcaata tgtgtatcat caactttttc ttctttgata
     3061 tttacatcgt caaaataaga agttcttttt aaagcatttt ttgactcgct taagtctgtt
     3121 ctattgtata aattaccttc tgttatatat aattctcggc gtatgacgcg atctacggtg
     3181 cgtgaatttc ctgaaataat aacatttctt atataaactt tatcgtgagg gattacttta
     3241 aatacaacgg tggcttcttg agtttgatca tttttttgaa tatcaggata gacttctaca
     3301 aacgcataac ccaaatcagc actttgtgtt tctatggttt taacatcttt tctaatgtct
     3361 tcgatattga tagttttgcc agcgcttgat cttaaatctt ttacggtttg tgcattttgc
     3421 ttatcatcaa ataaaggatt ttctatgctt atacttttaa ttttataagg ctttccttct
     3481 ttgataaaat aagtcaaatt tgcttgataa gtatctgtgt aggttttaag ataaggggag
     3541 gatacttgaa catctaaata tccttttttc atatattcat cagcaattct tgaactatcg
     3601 ttactaagtt caaaaacttt taattttcca tcattgcgtc cccacatcca tcccataaat
     3661 tctttttctt tgttaacaac agcaggttct atatcagaat atgaaaattt ctttgctcca
     3721 cttaaatgaa cattatcaat aatgatattt tcaccacgat ttactataaa ttcaagctct
     3781 agtccatcag tattttctaa agtctttttt ttgtattcta caatagtatc aaaataactt
     3841 tttgcttcat aataagcttt aatgcgttca atagcttctt ttatacttcc ttcatcaagt
     3901 agtgtacctc ttttaatccc taaaatactt tcaacttgtt ttctatcatt tgaagctata
     3961 cctgtgatag taacctttgc tatagttggt ttttcagtaa ctataatttc caaaattcca
     4021 ttgttgtttt ctactgcaat attttcgaaa taattttgtt tataaagatt aagaatagca
     4081 gtgttgattt ttgcaggatt tatttcctcg cctattttaa gccccgtgat atttatagcg
     4141 cttgtgttcg ataaatgatt taatccgata aatttaatat ctttaatggt tgctgcattg
     4201 gccatagcaa ctaaagcaca aatactaata agatgttttt tcattgattt tttacctaaa
     4261 gctttattaa aagctgtata atagcaaaaa aaatttaaca aaaaaactaa ggtagaaagt
     4321 atgaaaatag caattatagg gcttgggctt atgggtggat ctttagggct ttgtttgaaa
     4381 gaaaataagc ttatttcttg tgtttatggt atggatttaa gcaaagaaaa tgaaaaagat
     4441 gccctgcaat taggtcttat tcatgagctt atagaattta aagatttagc tttatgtgat
     4501 atgatttttg tcgcaactcc tgttgatgct attatagaaa ttttgcaaaa gttagttgat
     4561 ttgccttcta atgtaacaat tatagagctt ggaagtacaa aaagaaaaat tatagaaagt
     4621 ttgcctaaga atttaatcaa acaaactctt tttgctcatc ctatgacagg aactgaaaat
     4681 tcaggtccaa aagcagcttt taaagagctt tataaagatg cagtttgtgt tctttgtgat
     4741 agtgaaatag ctgatgattt acatcaaaaa agagcggtag aaattttttc tcatttaggg
     4801 atgaaaattg tttttatgga tagtaaagcc catgatcatc atgctgctat tatttctcat
     4861 ttgcctcatg ttataagttt ttctttggca aattttgtaa tgaaggaaga agataaaaga
     4921 aatattgttc atttagccgg aggatctttt aaaggtatga gcagaattgc caaatcatcg
     4981 ccacaaatgt gggaaagtat ttttttacaa aataaagata acttattaag ttctattgat
     5041 ttttttcaac aagaattaga gagatgtaaa caaatgatac aattagacaa aaacgatgaa
     5101 ttaagagaat ggatgaaaca ggctaatacc ctaagagaaa ttttataaat ttgctagata
     5161 tttactgaaa atataataga atttatatta aaagcaacaa aaacattgaa aatttttaag
     5221 gaaggttatg gcaaaaagaa aaggcaaaac ttatttatct gttttaattt tagttttaat
     5281 agcaattttg atttttttta tttcaagatt aagtattttt gaaaaaaatc ctcctcaaat
     5341 tttaatgcca gatgttgtat atactgatct taaaaaacct attttagtgc atattaaaga
     5401 tgatgaaagt tctatcaaaa acgtacaaat tatattgcat aaagacgaca atactagtgc
     5461 aatggttata gcagatgaaa agatttctaa tttaaaagat attaccttac aagttgcttt
     5521 gccaaaattt ggttacaaag aaaatgtaaa atcttttgtt ttggaggtga tagctaaaga
     5581 ttctagtttt tggaattttt ttagtggcaa tgaagcaaga aaacaaattg cggtattagt
     5641 agataatacg gctccaaaaa tcaatatcat aagcaattct taccaaatcg agcaaggtgg
     5701 tgctggggca gttgttttta aggctgatga tgctaattta gataaggtgt atatagaaac
     5761 aaataaaggt aaaatcttta aagccacatc ttatgtaaaa gaaggatatt atgcggcttt
     5821 gattgcttgg gatgcaagag atgaggaatt tcgtgcattt gttatcgcta cggataaagc
     5881 gggcaatatt tcaaaagaac gtataaggta ttattttgtt aatcgtaaat atcgtgtttc
     5941 aaatatcaat ctgacggata aatttttaga tggaaagatt gagaatttag caaatcagta
     6001 cgctccaaaa gataataatc tcaatcgtta tgaaaaattt aagtttgtca atgaaacttt
     6061 aagaaatagc aatgaaaaac ttatccatga aatcacttca aaagtacctg aggaaaaaat
     6121 tgataatttt gatttgaatt tatttttacc tcttaaaaat ggtatgaaag tagcggattt
     6181 tgctgatcat aggtattatt cttataatgg gcaatttgtg agtgattctt atcatatggg
     6241 gcttgatcta gcaagcgtag cacaagctcc tatcataagt aataacgcag gcaaggttgt
     6301 ttttgctgct gaaaatggaa tttatggttt aaatttaatt gtttatcatg gttttggagt
     6361 atatagtctt tatgggcact gttcttctaa aaatgttgat ttagatgaaa tgattaataa
     6421 acaaagcatt ataggcaaaa caggaacaag tggtttagcc ttaggcgatc atttgcattt
     6481 tggagttttg gttcaagggg ttgaaacgcg tcctgaacaa tggcaagata aaaaatggat
     6541 agaaaataat atttacaatg ttttaaatga tggtaaaaag ataattttag gaaaaaatta
     6601 atgaaacaat taactttagc aaaaactgtc aaaggcgtag gtataggact tcataagggt
     6661 gaacccatag aaattacttt agagccttta gaagcaaata gtggtatagt attttttaga
     6721 agtgatctta atgcaagcta taaggcaagt cctgaaaatg tgatcaatac tcaaatggca
     6781 actgttttag gagatgaaag agggtttatt tctacaatag agcatttaat gagtgcgatt
     6841 aatgcttatg gaatcgataa tgtacgcata gttttaaatg caaatgaagc tcctgttatg
     6901 gatggatcaa gtattagctt ttgtatgatg cttgatgaag caggggtaaa agaacttgat
     6961 gcacctaaaa aaattatggt aattaaaaag cctatagaag taagagatgg taataaattt
     7021 gtgcgtttaa ctcctactaa agaaccccgt attaactata cgattaaatt tgacaatgct
     7081 gttataggtg aacaaagtta caattttgaa ttcagcaaaa aaaattatat agaaaacata
     7141 gcaagggcta ggacttttgg ttttttaaaa gatgttcaag ctcttaggag tatgaattta
     7201 gcactaggtg gaagtttaga aaatactata gtggtagatg aaaatcgtat tttaaatcct
     7261 gaaggtttgc gtttcaaaga tgagtttgta agacataaaa ttttagatgc aattggagat
     7321 ttaaccttac ttggatatcg tgtttttggg gattatactt catatgctgg gagtcatcgt
     7381 ttaaatcatt tacttactaa agaagtttta aaagataaag atgcttatga aattgtaagc
     7441 cttgaaaaaa caacccaaaa agcttatgaa aaggtatttg cataaaaact tctcttttac
     7501 ttaatacttt atctaagcct ttaatgatcg gaatttatca agatgataaa cttataaaaa
     7561 cttataaaag tgaagaaaaa gcaagcgaat ttttaccaaa aattttagat gaattgctta
     7621 aagaatatga ttttacaagt ttaatctatg ctaatggtcc aggttcttat atggggatta
     7681 aaatttctta tgtaagtttg agtactttaa gtatagtaaa aaatattcct ttatttgcgg
     7741 tgagtgcttt tgaattaaat ggctataaac ccataagtgc aaataaaaat ttttgttttg
     7801 tatataagga aggtgaaatt tgtttagagc aaaatatccc agtagagttt tttttaccaa
     7861 aaaatttaca agagcttaaa ctaaataatg ataatcttcc cttttatttt ttagatgcaa
     7921 tttaggatga aatttgaaaa ttttagttcc agctacgagt gcgaatttag ggccaggttt
     7981 tgattgttta ggacttagtt taaagctttt taatgaaact caaatccaaa aatcaggtgt
     8041 ttttagcatt agtattggag gcgagggaag tgataatatt tttcttaaaa aaaacaatat
     8101 atttgtaaat attttttatg aaatttatga aaaactaagc ggaaaaaaag ataattttcg
     8161 ttttattttt caaaataaca ttcctctttc aagaggatta ggaagctctt cagctgtgat
     8221 tgttggagct attgccagtg cttattatat gagtggattt aaggtagaaa aagaatgtat
     8281 tttagatgaa gctttaattt atgaaaacca tccagataat atcgctccag ctactcttgg
     8341 tggttttgtg tgttctttgg ttgaaaaaaa taaagtttat agtatcaaaa aagagattga
     8401 taaagattta gctgctgtgg ttgtgatccc aaatttggca atgagcacgg aacaatcacg
     8461 ccaagctttg gccaaaaatt taagttttaa tgatgcggtt ttcaaccttt ctcatgcttc
     8521 atttttaacc gcttgttttt tggagaaaaa atatgaattt ttaaaatttg caagtcaaga
     8581 taagctccat gaaatcaatc gtatgaaaaa cttacccgag ctttttgaag tgcaaaaatt
     8641 tgccttagaa aataaagctt taatgagcac actttcaggt tcgggatcga gctttttttc
     8701 tttagctttt aaagatgacg ctttagcttt ggcaaagaaa atacaaacaa aatttaaaga
     8761 ttttcgtgtg caatatttag aatttgatga taatggcttt gaaatttgct aaaaaatata
     8821 aaaaaaagat ataattttga aaaaacatat accaattaga atgtgcatag cgtgtaaaaa
     8881 ccgctttgag caaaatatgt tatttagatt taaagttgtt ttaggagata ttgtgcctaa
     8941 agcagaacat ggaagaagcg gatatttatg tcaaaattgt attgagagag aagataaagt
     9001 cttacaaaaa gcattttcta aaatatgtaa aaatttaaat actaaaatta ctcagcaagg
     9061 acttaaggag atatttttaa atggcaaaga ttagaattca tgaaatcgca aaagaattag
     9121 gttatgatag taaggaaatt attgaaaagg caaatgaatt aggacttgga attaaaacag
     9181 catcaaatgc tgtagaacct gagattgcgg cagctattta tgagtatata caaacaagag
     9241 aaattccaga agcttttaag aaaaatatca aaactcctac agcaaaaaag cctaaaaaag
     9301 aaaatataaa agaacaagaa aagctaaatg aatctgaaaa aaaagaacct aaaaaagaag
     9361 aaaagcttaa acaagaagtt aaaaaagaag aattaaaaat tgaaaaagaa aatgcaaaag
     9421 aggaagaaaa acaagaaatt attgatgctc ataagccaca aagccttgct agtgcaactt
     9481 tagccaaaag acgcggactt gttattgtta aaaagaaaaa agacgaagaa gaaattcaag
     9541 ttaaaaaaga agaagtaaaa aattcaaatg atatatctat caataatgaa gagcgcttaa
     9601 gtttaaaaac tatgttttca aatgctgatg agagtttaaa gaaaaagaaa aaagaaaaaa
     9661 aatcttttgt tgcgagtaaa aaagaaagta ccgaaaaaat gaatttttta gatgaacatg
     9721 attttggtga tatttcttta gatgatgaag atgaggtagt attacctgat tttagtgtaa
     9781 aagaacaaga aaaaccacaa aatatcaata aaaaacaacc taattttata agacaagctg
     9841 ttggaaattc tgcgggtttt gggtttgaag gtggaattca aagaagaagt cgtaaaaaac
     9901 catctaaaaa gattgaaaaa aaggaagtag aagaagtagg tagcgttgct atttctaaag
     9961 aaattcgtgt gtatgaattc gctgataaga taggaaaaag cactagtgaa gtgatttcaa
    10021 aacttttcat gcttggaatg atgacaacaa aaaatgattt cttagatgaa gatgcgattg
    10081 aaattttggc tgctgaattt ggtatagaga tcaatatcat taacgaggct gatgagtttg
    10141 attatgtaaa agactatgaa gaagagactg atgaaaaaga tttagtgact agagcacctg
    10201 tgattaccat catggggcat gttgatcatg gtaaaacttc tttgttagat tatattagaa
    10261 aatcacgcgt tgcaagtggt gaagcagggg gtattactca gcacgtgggt gcttatatgg
    10321 tagaaaaaaa tgggcgtaaa attactttta tcgatactcc aggtcacgaa gcttttactg
    10381 ctatgcgtgc aaggggtgca agtatcactg atattgtaat catcgttgta gccgcagatg
    10441 atggggtaaa accacaaacc aaagaagcga taaatcatgc taaagcagca ggtgtgccta
    10501 ttattattgc tattaataaa atggataaag aagcagcaaa tcccgatatg gtaaaaactc
    10561 aactcgcaga aatggaaatc atgccagtag aatggggcgg atcttatgaa tttgtaggag
    10621 tttcggctaa aacaggaatg gggattgaag atttgcttga aatcgtgctt ttacaagctg
    10681 atattttaga acttaaagcc aatccaaaaa gttttgctaa agcaagcatt atagaaagtt
    10741 ctgtgcaaaa agggcgtggt gcggtggcta ctatcatcgt gcaaaatgga acacttactg
    10801 taggaagtac cgtggttgca ggcgaggctt atggaaaagt gcgtgcgatg agcgatgatc
    10861 aaggtaaagc cttaaaagaa attaaaccag gcgaatgtgg ggttatcgta gggcttagtg
    10921 aagtagcaga tgcaggtgaa attttaatcg cagtaaaaac cgataaagaa gcaagagaat
    10981 atgctaataa acgccacgaa tacaaccgcc aaaaagaact tagcaaatcc actaaagtta
    11041 gcattgatga gcttggagct aagatcaaag aaggcaatct aaaagccttg cctgttattt
    11101 taaaagctga tgtgcaagga tctttagaag ccttaaaagc aagtttagaa aaacttagaa
    11161 atgatgagat taaagtgaat atcattcata gcggggtagg agggatcaca caaagtgata
    11221 tagagcttgc aagtgcgagt gaaaactcta tagtactagg ttttaacata cgcccaacag
    11281 gggaagttaa agagcgtgct aaggataaag gcgtagaaat taaaacctat aatgtgattt
    11341 ataatctttt agatgatgta aaagccttgc ttggtggtat gatgagtccg attatttctg
    11401 aagagcaatt aggacaagca gagattagac aagtgatcaa tgtgccaaaa atcggacaaa
    11461 tcgcaggttg tatagtaact gaaggggtga ttaaccgtgg agctaaaatt cgccttatcc
    11521 gtgatggagt tgtggtttat gaaggaaatg taagctcgct taaacgtttt aaagatgatg
    11581 ctaaagaagt ggcaaaaggc tatgagtgtg gcgtaggtat agaagggtgt gatgatatga
    11641 gagtgggtga ttatatagaa agctataaag aagtagagga acaagcaagt ctatgaaccc
    11701 aagtgagatt aaaaaactac gcactgaaag tatcttaaaa gagctaatcc ctgaagcttt
    11761 agcaaattta gatgatgaaa atttgaaaaa tttgtgtgta gtggatgtag agtgtaaaaa
    11821 aggcagatat gatgcttttg tgtatcttga taagatgttt tttaatgttc atgagcaaga
    11881 aaaaatttta tcttctttaa aaaaggcaag tagagctttg caaaattact gcatgagtga
    11941 gcagggttgg tataggtgtc cgaattttca ttttaaattt gatgataggc ttgagtatca
    12001 aaaccatatg gatgcacttt ttgaaaaaat aaaaaaggat aaaaatgaat cttgaagccc
    12061 tttgcaaaga agcagagctt agcttttatg atgatgagct agtaagtgaa aatggcagaa
    12121 aaatttatag aatttatgtg caaaaagaag gcggggtaaa tcttgatgat tgtgcaaggc
    12181 ttagtgaaat tttatcgcct atttttgatg tagagccacc tgtaaatggg gagtattttt
    12241 tagaagtatc ttcaccagga cttgaaagaa aacttagcaa gatagaacac tttgctaaaa
    12301 gtataggtga acttgtgaag atcacaacca atgaaaaaga aaaattcgaa gcaaaaatca
    12361 ttgctgtaga tgatgaaaat atcactttag aaaatttaga aaataaagaa aaaactacta
    12421 taaattttaa tgatataaaa aaagctagaa ccttcataca atggtaaaaa tttagatttt
    12481 tttatataat taaaataaaa acaaaaaatc aaaaggcatg caatgttaga aaataaatgt
    12541 gattggaaaa taagtaaggc agatcaaaat ggtaatgtgt attattattt tccaaaagat
    12601 gaagatgaat ttaaagaagc agttgtaaaa aatggcggta tgagtgtgta tgtttatcaa
    12661 gaaggtaaat ttatagatga atttcacaca aaaagtcaag gtgataaatg gacttcttct
    12721 attcttaatt atttaaaaac tatgagtaaa gatggagaaa tattttatag atattataaa
    12781 aattgcaaat tttttgctat accaaaaaat acattttcta aagatgattt taaaattata
    12841 aaggataata taaataataa tatatcctta aaccaaattc tttatgggtc tccagggaca
    12901 ggaaaaactt atcatactat agataaggct ttggaaatct tgggtgaaaa tttagaaagt
    12961 agagatgaga aaaaagctaa atttgatgag tatgtaaaaa atggacaaat agtatttact
    13021 acttttcatc aaagctatgg atatgaagaa tttgtagaag gtataaagcc tcacatagat
    13081 agcgaagaaa attctaaaga aataaaatat gaaataaaag atggaatttt taaagaactt
    13141 tgcgaaaaag ctttagaaaa tagggatagt ataaaaaatt ttaattttta tatagataaa
    13201 ttaaaagaaa aagtaaaaat agatgataat aatccagaaa aatattttga attaccaaat
    13261 actaaatatt ctattcaata tagaaatgga aaaacattta gaattaaatt tgatgatatg
    13321 agtaaaaatc ataaagatta tccagtaagt atagataata tagaaaaatt atataaaact
    13381 tctaatatag atgaaatata taattcagca tatgttagag ctatattaaa ttatttaaaa
    13441 ttgcagggtt tagaagatta caaagaaaaa gatgaaaaag taaatttacc ttatataatc
    13501 atcatcgatg aaatcaatcg tggtaatgta agtaagattt ttggtgagct tataaccttg
    13561 atagaagcta gcaaaaggat aggtgaaaaa gaagagttaa aagtgacttt gccttatagt
    13621 ggcaaagaat ttggagtgcc taaaaatgtt tatattatag gcactatgaa tacagccgat
    13681 agaagcataa cttctcttga tacagctttg cgaagacgct ttgaatttat tgagatgatg
    13741 cctgatgtga gcaaattatc tatagattgt gaaggtatta atttacaaga attattaaaa
    13801 gctataaaca ctcgtataga atatttacta gatagagaaa aaaccatagg acacgcattt
    13861 tttataagtg ttgaaaattt agaaagttta aaaaaggttt ttaaaaatag aatcatccca
    13921 cttttgcaag agtattttta caatgactat gctttgattg atgcggtttt aaataaaaat
    13981 ggtatgttgg aaattagtgt tgaaaataaa gattatttaa aaaatatgac agaatttata
    14041 gaaagcgata agattgttta taaatttagt gatagtaata attggaataa agatactttt
    14101 ataaaaatat ataaataatg aaaacaagta atactttttc tatcatcgaa caccaagctt
    14161 tttctaaaga agatttaaaa gaaattttca aagaaaaggc cgaagggttt tataaagagc
    14221 tagaagactt tgcaaaaaat aatgaaaatc ttctaggctt taaaaacaaa aattccttaa
    14281 aagctaaaaa ttatgtcggc attatacaga ctaaaagcgg ggttttggag attttgccaa
    14341 aatgcacgaa tttagatagt tataaaaaag aagatagttc ttcaaatcat gacaaagaaa
    14401 aactaagaag atgttatgaa ttagacaata tttctaaaaa taatgatttt tatgaaaaag
    14461 attttaaatt taatcctaaa aatcttttga taaatatgct aaaaacctta aaaaactccc
    14521 cctttaaaaa atcgcaaatt tcatctttgc aaagttctaa aattccttta tttgaagtgt
    14581 ttatcactat gtttttagat gaatttgata gcgtatataa aaaaggcttg atgagatctt
    14641 atctaagttg cgaagaaaat agggcttttt taaagggaaa attactattt aacgagcata
    14701 tcaagcaaaa tttgatacac aaagaaagat tttttacaag caacgatgag tttgttttag
    14761 atatagcacc caatcgtttg ataaaatcaa cgctaaattt tttaaaatca aaaacaagtt
    14821 tgaataaatt tagacttata aaagccatgc aaatgcttga tgaggtagaa ttttctaaaa
    14881 attatgaaaa agattttagc tataaaattt caagacattt tgattattat gaaaacttgc
    14941 ttttgtggtg taaaatt
//
LOCUS       DARATF010000041        14666 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.041, whole genome shotgun sequence.
ACCESSION   DARATF010000041 DARATF010000000
VERSION     DARATF010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14666
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.041"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..518
                     /locus_tag="SB502_000972"
     CDS             <1..518
                     /locus_tag="SB502_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEG0434426.1"
                     /translation="NDFDIKVFANLLNKEYQKYNISELDLEVFKLKFIQFAKNEKEHF
                     SKGFYVAHTELELNNILKLGTDSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLA
                     FYQALYDENASVGFYDLNSMQILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEYC
                     PYKLIYKKELK"
     gene            515..3280
                     /locus_tag="SB502_000973"
     CDS             515..3280
                     /locus_tag="SB502_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HEG0434427.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNRPKILNPTKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDNLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQNI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCALKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIIKRNEESVNGNYPSYFKGGFLNIHSQERGFLE
                     SKEQILSVKKESIQTLQKFEKITLQEIQSEERLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNIQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVGTYKIAISEILQKDKVRAFIVYCLEN
                     EIQILEI"
     gene            3364..3789
                     /gene="rplM"
                     /locus_tag="SB502_000974"
     CDS             3364..3789
                     /gene="rplM"
                     /locus_tag="SB502_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEG0434428.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            3792..4181
                     /gene="rpsI"
                     /locus_tag="SB502_000975"
     CDS             3792..4181
                     /gene="rpsI"
                     /locus_tag="SB502_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEG0434429.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGFDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            4306..5265
                     /gene="cadF"
                     /locus_tag="SB502_000976"
     CDS             4306..5265
                     /gene="cadF"
                     /locus_tag="SB502_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HEG0434430.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            5265..5906
                     /locus_tag="SB502_000977"
     CDS             5265..5906
                     /locus_tag="SB502_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0434431.1"
                     /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNL
                     IGYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADL
                     GIVTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKRLNKTQENAY
                     MIGDTILDIQAAISANITPLALTCGYGNENELKAHSIVFLNAYEAVNYIARLN"
     gene            5999..9559
                     /gene="nifJ"
                     /locus_tag="SB502_000978"
     CDS             5999..9559
                     /gene="nifJ"
                     /locus_tag="SB502_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEG0434432.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPECVIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIIDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            9583..9894
                     /locus_tag="SB502_000979"
     CDS             9583..9894
                     /locus_tag="SB502_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEG0434433.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKEIKFQYDNLEIAIQINKNDKINI
                     N"
     gene            9872..11284
                     /gene="mshL"
                     /locus_tag="SB502_000980"
     CDS             9872..11284
                     /gene="mshL"
                     /locus_tag="SB502_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HEG0434434.1"
                     /translation="MIRLILINILFCHYLYALDCQKRLFDISINEKLSIQESLDELAK
                     YCSFSIIVKDKIAKEKLEILQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGI
                     NTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQNIE
                     KEIIVLLKNSHEDYEAKIPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVIID
                     VSILAVSLNENHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNFDS
                     IINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNN
                     YSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSS
                     VVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKATEIVFIITP
                     SIVDSVNAPSLKDLGFKHYE"
     gene            11277..11885
                     /locus_tag="SB502_000981"
     CDS             11277..11885
                     /locus_tag="SB502_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434435.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
     gene            11889..12476
                     /locus_tag="SB502_000982"
     CDS             11889..12476
                     /locus_tag="SB502_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEG0434436.1"
                     /translation="MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKY
                     NKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYKELEEVKAVQENTHISKIE
                     IDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
                     LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK"
     gene            12466..14025
                     /locus_tag="SB502_000983"
     CDS             12466..14025
                     /locus_tag="SB502_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEG0434437.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTVIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNDDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGNKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLSCAIRENQDKMILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            14022..>14666
                     /locus_tag="SB502_000984"
     CDS             14022..>14666
                     /locus_tag="SB502_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEG0434438.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYLMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGTSLPFITHVMLEIYNFLDSYGIFCIF"
BASE COUNT         5413 a         1742 c         2631 g         4880 t
ORIGIN      
        1 ataatgattt tgatataaaa gtttttgcaa atttattgaa taaagaatat caaaaataca
       61 atatcagtga acttgatctt gaagtattta aattaaaatt tatacaattt gctaaaaatg
      121 aaaaagagca tttttcaaaa ggcttttatg tcgcacatac agagcttgag ttaaacaata
      181 ttttaaagct cggaacagat agtataaaac ttaagggtac tatagatcgt atcgatagtt
      241 caaaagaagg taatttgatt attgattata aaagtggaaa agtgccaagt aattcttatc
      301 aacttgcttt ttaccaagct ttatatgatg aaaatgcaag cgtgggtttt tatgatttaa
      361 atagtatgca aatattgcat caaaaagcca aaagtttaga tgagctaaga gaaagactta
      421 aagatttagt tcttatgagt aaggaagaaa tagagtttga aaatgaacaa gatgagtatt
      481 gtccttataa actcatttat aaaaaggaat taaaatgagt caatttgagc cttttttggc
      541 attagaagcg agtgcaggaa gcggaaaaac ctttgccctg agtgtgcgtt ttgtagcact
      601 tattttaaaa ggagctagga ttaatgaaat tttagctttg acttttacca aaaaagctgc
      661 taatgaaatg caaaaaagaa ttattgagac ttttttaaac ttagaaaaag aaaataaaac
      721 cagtgaatgc aatgaacttt gcaagctttt aggtaaagat aaagaagagc ttatttcttt
      781 aagagatgct aaaaaagaag aatttttaag aacagagtta aaaatcagta cttttgatgc
      841 ttttttcgga aaaattttgc gtgtttttgc tttaaatttg ggcttaagta gtgattttac
      901 aatgagtgaa gagaggcttg atgtaagaga gattttttta aaacttctta aaaaagatga
      961 attaaaagat ttggcttatt atattaattt agttgatgag aaagaaaatt tttttaacga
     1021 gcttgaaaaa ttttatgaga atgcttattt tcaaaatcgt cctaaaattc taaatccaac
     1081 taaagcttat atcaataaag cttatagtga gttaagaagt tattgtttgg gtcttactca
     1141 tgtaaaaaat tataaaaatt tgtgtgacaa ttttaaaagt gaagttttag atttatccgt
     1201 gtttatgcaa tcaagtttta tgacaaaatt tgaaagtaca aaatatttac aagatttaga
     1261 aagtactaac ttgcatttta gtgcaaaaag aatggagctt ataaatgctt taaataccta
     1321 tgccatagag cttgaaaatt ataaaattgc taatttaatg aatcttttaa atcattatag
     1381 tgaagctaaa aatatatttc ataaagataa aaatacctta aatttccaag atgtgagtaa
     1441 aaaagtttat gagttaataa ccagtgaatt taaggatatg atttattttc gtttagatgg
     1501 ttttatttcg catttgctta ttgatgaatt tcaagataca agcgtgatcc aatatcaaat
     1561 tttacgccct ttgatcgctg agcttgtttc aggagaaggg gttaagaaaa atcgcacttt
     1621 tttttatgta ggagataaaa aacaaagtat ttatcgcttt cgtaaaggaa aaaaagaatt
     1681 atttgatttg ttaaaacaag aatttagtca aattaaaagt gataatttaa atactaatta
     1741 tcgttctaaa gagcttttgg ttgattttgt taatgaaact tttaaagaaa aaatcaaaga
     1801 ttataaagaa caatttgcct tagaaagtaa aaaaggcggt tttgtgcgta ttgtggagtc
     1861 taaggaacaa aaggttaaaa accaagccca agaaattaag gaaaagactt tagaaacttt
     1921 atttgagcaa attaattttt taagatctaa aaatatttct tatgatgata tttgtatttt
     1981 gtgttggaaa aatagcgatg cggatatggt tttggatttt ttaagagagc aaaatattcc
     2041 tgcttttact caaagtaatg ttttgcttga aaataaagca agtgtaagac ttgttttaga
     2101 atatgctaaa tattgtattt ttggtgatga gttttacttg gtatttttaa aggaactttt
     2161 aggttttgag ccgagaaaaa ttacccttga tttttcaaaa aatgctatgg aaaatgtact
     2221 ttttttaata aaagaattaa aacttgattt aaatgatatc gctttaatac aatttatcga
     2281 atatgctaaa actaaggaga attttttaaa gcttttattt gagccttgtg ctttgaaaat
     2341 agtaagcgaa caaaatatgg gaattagtat tatgagtgtg cataaatcta agggtttgga
     2401 atttgatcat gtgattttac ttgatagttt atctaaaaac aattcaaaca atgaagatat
     2461 catgcttgaa tatgatatca atcaaggttg gcaactccat attaaagata aaattcgaga
     2521 gcttactaaa gagcctattt atactctttt taaagaaaat attacaagag caaattatga
     2581 agatgatatt aataaacttt atgtggcttt tacaagagct aaggaaagtt tgatcatcat
     2641 aaaaagaaat gaagaaagtg taaatggaaa ttatccaagt tattttaagg ggggattttt
     2701 aaatatacat tctcaagaga gaggtttttt agaaagcaaa gaacaaattt taagcgttaa
     2761 aaaagaaagc attcaaactt tgcaaaaatt tgaaaaaatt accttgcaag aaattcaaag
     2821 cgaagaaagg cttgatagta aagaactata ttttggaaat gcttttcact tttttatgca
     2881 aaatttaaaa cttcctaagg gtgaaaattt tcaaatactt actcaaagat gcaagagtaa
     2941 atttagacat tttttagatg agagtgattt tgaaaagctt tttaaaagaa ttgaaatttt
     3001 acttaaaaat attcaatttc aaaatttgat tggtgatgga aagcttttaa aagaacaagc
     3061 tttgagtttt aatggagaaa ttaaacaatt agacttgctt gctttaaaag atgaagaagc
     3121 ttttataatt gattataaaa caggtcttgc tatgcaagat aaacataaag agcaggtagg
     3181 aacttataag atcgccatta gtgaaatttt gcaaaaagat aaagtgcgtg cttttatagt
     3241 ttattgtttg gaaaatgaaa ttcaaatttt ggaaatataa actttatttt tacttaaatt
     3301 aagtaaaaat taatattatt ttttatacaa tcacatttta aatttttggc aaaggtaaaa
     3361 attatgacaa agataacaaa gccaaacgaa gtaaaacgag aatggattgt tttagacgca
     3421 gaaggcaaac gctttggtcg tcttttaact gaagtagcaa caattttgag aggtaaaaac
     3481 aagccttgct ttactccaaa tgttgattgt ggtgattatg taattatcat caatgcttca
     3541 aaagctgtat ttacaggtgc taataaagca gaagataagc tttatcatag acattcagga
     3601 tattttggaa gtgtaaaaag tgaaaaattt ggtgatttac ttgaaaaaaa tcctgcaaaa
     3661 ttgtataaat tagcagttag aggtatgctt cctaaaacaa atttgggcag agctatgctt
     3721 aaaaaattaa aaatctatgc gggtagtgag cacccacaca ctgcacaaat tgctaaagaa
     3781 ggaaaataat catggcaaca acatacgcaa caggtaagag aaaaactgct atcgcaaagg
     3841 tatgggtaaa accaggtagt ggtaaaatta gtgttaatgg ttttgattta aacacttggc
     3901 ttggtggaca cgaggcgatt aagcttaaag tggttcaacc tttacttgtg actaaacaag
     3961 aaacttcaat ggatattaag gcaactactt taggcggggg ctatagtgct caagctgaag
     4021 ctttaagaca tggaatttca agagctttag cagctatgga tgctgatttt agagccttat
     4081 taaaacctaa aggacttctt actagagata gtagaactgt tgagcgtaaa aaatatggac
     4141 gccgcaaagc aagaagaagc ccacaattct ctaaacgtta atatttttgg tgggattttc
     4201 ccacctttct acaatttttt ataaaactca tccttttttc tatcatttat gttataattg
     4261 caaaatttaa atttttattt tataacacaa tgaaaggttt tttctatgaa aaaaatattc
     4321 ttatgtttag gtttggcaag tgttttattt ggtgctgata acaatgtaaa atttgaaatc
     4381 actccaactt taaactataa ttactttgaa ggtaatttag atatggataa tcgttatgca
     4441 ccagggatta gacttggtta tcattttgac gatttttggc ttgatcaatt agaatttggg
     4501 ttagagcatt attctgatgt taaatataca aatacaaata aaactacaga tattacaaga
     4561 acttatttga gtgctattaa aggtattgat gtaggtgaga aattttattt ctatggttta
     4621 gcaggtggag gatatgagga tttttcaaat gctgcttatg ataataaaag cggtggattt
     4681 ggacattatg gcgcgggtgt aaaattccgt cttagtgatt ctttggcttt aagacttgaa
     4741 actagagatc aaattaattt caatcatgca aaccataatt gggtttcaac tttaggtatt
     4801 agttttggtt ttggtggcaa aaaggaaaaa gctgtagaag aagttgctga tactcgtgca
     4861 actccacaag caaaatgtcc tgttgaacca agagaaggtg ctttgttaga tgaaaatggt
     4921 tgcgaaaaaa ctatttcttt ggaaggtcat tttggttttg ataaaactac tataaatcca
     4981 acttttcaag aaaaaatcaa agaaattgca aaagttttag atgaaaatga aagatatgat
     5041 actattcttg aaggacatac agataatatc ggttcaagag cttataatca aaagctttct
     5101 gaaagacgtg ctaaaagtgt tgctaatgaa cttgaaaaat atggtgtaga aaaaagtcgc
     5161 atcaaaacag taggttatgg tcaagataat cctcgctcaa gcaatgacac taaagaaggt
     5221 agagcggata atagaagagt ggatgctaaa tttattttaa gataatgaat aaaactattt
     5281 tatttgattt agatggcact ttaattgatt ctactgatgc tattttaaat tctttccaag
     5341 gagcttttaa agcccttgga ttaacttcta aaaataatga agaaatcaaa aatctcatag
     5401 gttatccttt agagcaaatg tttagaatgc tttatccaga taaagtaaat ttaagtaaag
     5461 aatttgtatt agcttatcgt gaaatttatg cacaaattta tttagaacaa accactcttt
     5521 tgcctaaagc aaaagaagca ttagaacttg gaagcgaaat tgcagatctt ggtatagtta
     5581 caacaaaagg aggtaaattt actccgattt tacttgatta tttgggagtt aaaaaattct
     5641 ttaaaacttt aattactctt gaagatgtca caaatccaaa gccaagttcc gaacctataa
     5701 ttttagcctt aaaaagactc aataaaactc aagaaaatgc ctatatgata ggcgatacaa
     5761 tattagatat tcaagctgca atttctgcta atatcactcc tttggcctta acttgtggct
     5821 atggcaatga aaatgaatta aaagctcatt ctatagtatt tttaaatgca tatgaggctg
     5881 ttaattatat agctagatta aactaatttc aagttttcgt taaacgcctt ttaagagaat
     5941 ttatagtaaa ttgatagcta aaaaattata aaaattatca atataaagga aggtctcaat
     6001 gggtaaaatt atgaaaacta tggacggaaa tgaggctgct gcatacgctg cgtatgcttt
     6061 tactgaagtt gctggaattt atcctattac acctagttct cctatggctg attataccga
     6121 tatgtgggca gctgcaggaa aaaaaaatct ttttggagtt cctgtaaaaa tcgtagaaat
     6181 gcaaagtgaa gcaggagctg caggtagtgt gcatggatct ttacaagctg gggctttgac
     6241 tacaacttat acggcttctc aaggattact ccttaaaatt ccaaatatgt ataaaatagc
     6301 aggtcaatta ctcccctgtg taatccatgt agcagcgcgt tctttggctg ctcaagcttt
     6361 gtctatcttt ggtgatcatc aagatattta tgcagcaaga caaattggtt ttgctatgct
     6421 ttgttcgcat tctgtgcaag aaaccatgga cttagctggt gtagcacatt tagctgcaat
     6481 taagggaaga gtgccatttt tacatttttt tgatggtttt agaacaagcc atgaaattca
     6541 aaaagttgaa gtaatggatt atgcgcattt tgatagatta ttagatagag aagctttgct
     6601 tgaatttaga aataatgctt taaatccaga aaatccaaaa acacgtggaa cagcacaaaa
     6661 tgatgatatt tattttcaaa ctagagaagt aagcaatcgt ttttacgatg ctttacctga
     6721 tgttgttaat gaatatatgc aagaaatttc aaaaattaca ggtagagaat acaaaccatt
     6781 tacttattat ggtcacaaag agccagagtg tgtgattgtt gctatgggtt ctgtaactca
     6841 agcacttgaa gaagtggtgg actatcttaa tgccaagggt gaaaaggtag ggattttaaa
     6901 agtttatctt tatcgcccat ttagtttaaa atatttcttt gatgttatgc caaaatcagt
     6961 gaaaaaaatt gcggttttag atagaaccaa agaaccagga agtcttggag aaccacttta
     7021 tcttgatgta aaatcagctt tctatggaag agaaaatgct cctgttatag tgggtggaag
     7081 atacggactt tcttcaaagg atgttgatcc tgctcaaatg atagcagtat ttgaaaatct
     7141 taaacttgat aatccaaaag atggctttac tgtaggtata attgatgatg taactcatac
     7201 ttcactgagt actggagaga aaatttcact tggagatgaa agtacgatcg aatgtttatt
     7261 ttacggactt ggtgctgatg gaactgtggg cgcaaataaa aactcgatta aaatcatcgg
     7321 agataaaacg gatttttacg ctcaagctta ttttgcttat gattctaaaa aatcaggggg
     7381 ttatacaaga agccatttaa gattttctaa aaaacctatc cgttcaactt atcttgtttc
     7441 aactccgcat tttatcgctt gttcggtagc ggcttatttg gaaatttatg atgttttagc
     7501 aggaattcgc aaaggaggaa ctttcctttt aaatagtatt tggaatgctg aagaaaccat
     7561 aagacaactt ccagatgcag taaagaaaac tttagctgaa aaagaagtaa atttttatat
     7621 catcaatgca accaaactag ctcgtgatat aggtttggga aatcgtacaa ataccattat
     7681 gcaatcagcc tttttcaaac ttgcaaaaat cattccttat gaagacgcac aaaaatacat
     7741 gaaagagctt gcgtataaat cttatagtaa aaaaggcgat gctattgtag aaatgaatta
     7801 caaggctatt gatgtgggtg ctgatggact tgtaaaagtt gaagtggatc caaattggaa
     7861 aaatttagag cttaaagaaa aagaacaaac caatgcctat aaaggtactg aatttgttga
     7921 aaaaatcgta aaacctatga atgcggctaa gggtgatgat ttacctgttt cagccttttt
     7981 aggttatgaa gatggaagtt ttgaacacgg cacaaccgaa tacgaaaaac gcggtgttgg
     8041 ggttatggta ccaagatgga tagaggcaaa ttgtattcaa tgcaatcaat gtgcttcagt
     8101 ttgtccgcat gctgttatca ggccattttt gattaatgat gaagaaatgg caaatgcacc
     8161 tcgcggtgta aaagatcatg ctttagaagc taaaggaacc aaaggagaaa aattaagctt
     8221 taaaattcaa gtttctccac ttgattgtac aggctgtgag ctttgtgttc atgagtgtcc
     8281 tactaaagaa aaatctttgg ttatggtacc acttcaagaa gagatggatt ttggtgagca
     8341 agaaaatgcg gattatttat ttaaagaaat tacttataaa gatgatattt taaataaaga
     8401 aaccacaaaa ggagcgcaat ttgcccaacc tttatttgaa ttccatgggg catgtcctgg
     8461 atgtggggaa actccttata ttactttaat tacaagattg ttcggtgaaa gaatgattgt
     8521 ggctaatgct acaggttgta gttctattta tgggggttca gctccatcaa ctccttatag
     8581 aaaaagtgtg aaaaatggac acggtcctgc ttggggaaat tcactttttg aagacaatgc
     8641 tgagtttggt ttgggtatga aaattgcaac tgaaaataca agacaccgca ttgaacatat
     8701 catgaatgaa agtatgcaag aagttccaaa tgctttatca gctcttttta aagattggat
     8761 tgcaaataaa gacaatggtg ctatgtctgt ggaaattaaa gataaaatga tccctatttt
     8821 agagcaaaat aaaaatatta aagccgtaca agatatatta gagcttaaac agtatttaag
     8881 taaaaaatct cactggattt ttggtggtga tggttgggct tatgatatag gctatggcgg
     8941 acttgatcat gttttagcaa gtggagaaaa tgtaaatatt ttagtgcttg atacagaagt
     9001 ttattctaat acaggcggtc aaagttcaaa atcttctaga acaggagctg tagcacagtt
     9061 tgcagcagca ggcaaaccta tacagaaaaa agatctaggt caaattgcta tgacttatgg
     9121 ttatattttt gtagcacaag taaattcaac ggcaaattat actcatctta tcaaagctat
     9181 cactgcagct gaggcctatg atggaccatc tttggtgatt tgttattctc cttgtatagc
     9241 tcatggtatt aaaggtgggc tgggttactc aggagagcaa ggtgagcttg ctacaaaatg
     9301 tggttattgg ccactttata cctttgatcc tcgtttagaa gagcaaggaa aaaatccttt
     9361 aactctaaca ggaaaagaac ctgattggga tttatatgag caatttttga tgaatgaagt
     9421 gcgttataat tcacttaaaa aagcaaatcc tgaacacgct gctgagcttt ttgaacgcaa
     9481 taaaaaagac gctcaacgtc gctatagaca gcttaagcgt atcgctatgg ctgattatag
     9541 caatgaggtc gaaagctgat aaaatatatt tttagtgcta cattgtgttt tagcactttg
     9601 tttgcacaag ataattttga agagtatttt aaacttatag ataaagaaaa tcgtataaat
     9661 tttaatactc ttcaaaaccc atttgtgaat cctacttttg aaaaattaag acatattaaa
     9721 attactgcaa ttatgcttga taaagtaaaa atttatgatc gatggtataa aaaaggtgat
     9781 atgattgatg atgctataat atatgaaata aatactaaag agattaaatt ccaatatgat
     9841 aatttagaaa ttgcaatcca aataaataaa aatgataaga ttaatattaa ttaacattct
     9901 tttttgccat tatctttatg ctttagattg tcaaaagcgt ctttttgata tcagtattaa
     9961 tgaaaaatta agcatacaag aaagtcttga tgagcttgca aaatattgtt cttttagtat
    10021 tattgttaaa gataaaattg ccaaagaaaa attagaaata ttgcaaaact ctgtcaatat
    10081 tcatcaaatg agtttagacg aaatttttaa tttttttatc aaagagcatg atcttagcta
    10141 tgattttgat ggtaaaattt taagaatttc aggcattaat acgaagattt ttaagataag
    10201 ttatatcact tctatcagag aaggacaaag cataactaaa gcgtctgtag acgctaaacc
    10261 aaggcaaagt gaatatagcg gtagttttga tgacgcagaa gacaatatga ttaaaagtat
    10321 ggaaaaattt gatttttggc aaaatataga aaaagagatt attgtattat taaaaaattc
    10381 tcatgaagat tatgaggcta aaattcccat tataaatccc aatgcaggtc ttattatagt
    10441 aactggaaca aattctcagt taaaaagtgt gaaaaattat ttgcaaaaac tagaaaatcg
    10501 tcttaaaaaa caagttatta tcgatgttag catacttgct gtgagtttaa atgaaaacca
    10561 ttctagtggg attaattggc aaaattttaa tataggttta aattcgcaag taaataatga
    10621 aaattctttt attcagtttc aaaatgggca aggttttgtt aagaatttgg gtttaagggc
    10681 gaatttaaat tttgattcta ttattaactt tctttctcaa aatggaaaaa ctagcgtgct
    10741 ttctaatcca aagcttatgg ctttaaataa ccaacaagcc attatttctg taggtgatac
    10801 tataaattat caagttaaag aaagttctaa aggcactgaa aatgggacta ctgttagtga
    10861 aagttataac aattattcta tttttgtagg cattttactc aatatcttgc ctgaaatttc
    10921 tgatgatgga aaaataatgc tcaggattaa tccaagctta agtgatttta agtatccaga
    10981 agataataaa cgacaaaaag aaccaagaac tattgctcct gataccatac aaaaaaagct
    11041 ttctagtgtt gtgcaagtag agaataatca aactttaatt ttaggtggat tgatttctca
    11101 cgataaatct aatgagaaaa attctatcaa ttttctatca aaaattccaa tcctaggttc
    11161 tttgtttaaa ggagaagttt taaattctaa agcaaccgaa attgttttta ttatcactcc
    11221 aagtatagta gatagtgtaa atgctccaag tcttaaagat ctaggattta agcattatga
    11281 gtaaaattat tccatttaga gaagaaattt ttcatcaaat caatcaaatt ttagaaagcc
    11341 aaaaagcttt tattttttta tggggaaaaa gtggtagtgg taaaagtgta ttgttgcaaa
    11401 gattggcaaa aaaatataat gttgatttta ttaatgaaaa ttttaaagat cagagtttct
    11461 taaaagaaaa aattgagttt ttgatttcac aaggtcagag tttaatcatt cttgatgaag
    11521 tgggaatgta tgattatgca atgctagaaa gcatcaggat ttatagtgat tctataagtt
    11581 ttgttttaag ttctcataaa aagttaaata tacttaaaaa agagcatttt aaaagtcgtt
    11641 taagtgcttg ttttaaattg aaaaatatta gtcttttaga acttgatgat tatattaaat
    11701 tgaaattcgg aatgaatttt tcaaataaat gtcttaagtt tttacaaaaa atttctcaag
    11761 gaaatttaag atatattgat aaaactttaa aaagttttta tgagataaat agtttttttg
    11821 ataaaaacaa aagtcaagag tatattttaa agcttagtgc tttagagaat ggcttattaa
    11881 ggtaagatat gcaagaaaga attaaagagc ttgagcttag gtataaatac tttttactta
    11941 aaaaatattt aaaatattta ttattaatta ttctaatatc agtaatagca ttttgttttt
    12001 ttgtgctaat gcaaaaatat aataagcaaa aaaatattta tttgcaagct attgaacata
    12061 aaaagcattt ggagcaaaag attcttcaag cgcaaatttt acaagaaaaa aataagattt
    12121 ctagggaaaa gttatataaa gaactagaag aagttaaagc ggtgcaggaa aatacacata
    12181 ttagcaagat agaaattgat tctaaaattt taaatatttc tgatttaaaa aaatcttttt
    12241 atcaaaatcc aagctatgaa aaggcattaa atttagctaa gaagtatttt gatattaaag
    12301 cttatcaaaa gacaatattt tgggctttaa aagccaatga acttgacaag caaaaacaag
    12361 attcttggct gatttttgct caggctaaaa gagctttagg cgaagaaaaa gaagctcaaa
    12421 gtgctttaga tgcttatata aattattatg gtttaatgga attagatgga aagtagaatg
    12481 gataaaattt ttcaagctta tattgataat gaaataagtc ttgatgaaat ttgcactaaa
    12541 tttaatatca cttcttggga tttttttaaa aaattagcaa atttttgtaa tttgcatttt
    12601 gttgatttag atgaagataa tgattttatt tatgaaggta tacctttttc tttactttta
    12661 aaatttaaat ttctgcttat taaaaacaat gacggcttta tgattattag atccaaacct
    12721 tgttctttag agcttttaga gcaagttaag acttttatga tttgtgaaaa aatcgacact
    12781 gtaattgccg atgaattaaa gatagctaaa attttaaatc aaattcgcat tcaagaggag
    12841 attaaaagat taagcattaa gcttagactt gaatggcaag aaaatcacaa aagagatgat
    12901 caaagttgca tcagtcaaat ttttgatttt ttattacatg aaattttatc ttttcatgcg
    12961 agtgatattc atatagaagc aaggaatgat gatgctttga ttaggtttag ggttgatgga
    13021 attttgcgtg aatttgctat ttttgagaag gatatttatg aagctttggt ttttcatgtc
    13081 aaatttttag cttgtttgaa tttagctgaa tcaagaaaaa cacaagatgg aagttttgaa
    13141 ttagattttg aaaatgaaag atatgatttt cgtgtttcat gtttgccttt gatttatggc
    13201 gaaagtgttg ttataagaat tttaaaacat gataaagaaa ttttggattt gtataaacta
    13261 aatcttggaa ataaaaattt agaaatttta aaaaagattt tacatcgtcc caatggaatg
    13321 attttattaa ccggtcctac aggtagtggt aaaagcacaa ctttatacgc gtgtttaaat
    13381 gagttgaaaa gtattgaaaa aaagattatc tccgcagaag atcctataga atataaaatt
    13441 cctttagtgc agcaaatttt gcttaattca aaagttggag tcgagtttaa tagtgtttta
    13501 agagcaattt taaggcaaga tcctgatatt atcatgatag gagaaattcg cgatgaagaa
    13561 agtttagata ttgcacttaa agcttcttta acaggtcatt tgcttttaag caccttgcat
    13621 actaatgatg ctcttagcac cattgatagg cttttggata tgcaagcaaa aagttacttg
    13681 atagcatcgg ctttgagtct tgttatagca cagcgtttgg ttagaaaact ttgtccttgg
    13741 tgtaagcaaa aaagcaaaaa acattatatt gaatttgaag gtgaattttt tgaaccaaaa
    13801 ggatgtgagc gttgtcatca tagtggattt tttggcagag aattaatcgc tgagtgctta
    13861 gagatcaatg aagatttatc ttgtgcaatt agggaaaatc aagataaaat gattttaatg
    13921 gagcttgcaa aaaaatatgg ctttcaaact atgtttgaac aaggtttaaa aaaagccaaa
    13981 gaaggtctta caagtataga tgagctttta agggttgtaa gatgaaattt tatgaagtgg
    14041 aatttcttaa aaacaatcaa aattatacaa aaactataaa agctgaaaat ttaaatacag
    14101 cacaagcaaa agccttatca aagaattgga aaatcattga tataaaagaa attcaaaaat
    14161 ctaattttca gagattaaaa gatgaaaatt ttatactctt ttttaaagag ctggctttgt
    14221 tgtgtgaagt tggattaagt gttcaagaag cgattagaga attatatctt atgcattctt
    14281 gcaagattat gaaaaaaata ttagacaatt taattttagc ccaaaatcta aatcaagctt
    14341 ttgaaaatgc taattttgga ttaaatcgtg cggagctagc tttgataaaa acggctgaaa
    14401 agacaggaaa aatcagcgaa gtgtttagtc aaatttctaa acttcgagaa aaaagcttag
    14461 agagtcaaaa acaattgaaa aaggctttta gatatcctac tttggttttt ttaagtatta
    14521 tcggagcatt tttgttttta atgctttttg tagtgcctaa ttttaaagat ttatttgaaa
    14581 atttaggcac gagtttgcct tttatcacgc atgtaatgtt agaaatttat aattttttag
    14641 atagctatgg aattttttgc atattt
//
LOCUS       DARATF010000042        14092 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.042, whole genome shotgun sequence.
ACCESSION   DARATF010000042 DARATF010000000
VERSION     DARATF010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14092
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.042"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            281..880
                     /locus_tag="SB502_000985"
     CDS             281..880
                     /locus_tag="SB502_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide A protein"
                     /protein_id="HEG0434439.1"
                     /translation="MNNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQNHRKEF
                     FDSYFGRTFCDIGDTSKQPSQWEKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNSNS
                     LVLAPKITCETWFMEGTLKPNYHFALIDNENLSAVIEYFKSRPKDALEIINNAHQYIK
                     KFLDKKKEFHIGILVLTKYFYYSRQLELNKKRDILELIK"
     gene            1020..1095
                     /locus_tag="SB502_000986"
     tRNA            1020..1095
                     /locus_tag="SB502_000986"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1053..1055,aa:Ala,seq:ggc)
     gene            1099..1174
                     /locus_tag="SB502_000987"
     tRNA            1099..1174
                     /locus_tag="SB502_000987"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1132..1134,aa:Val,seq:gac)
     gene            1202..1732
                     /locus_tag="SB502_000988"
     CDS             1202..1732
                     /locus_tag="SB502_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0434440.1"
                     /translation="MQNTIIQKAVNKDLNSILEITKDALNAMKTMNFHQWDENYPNEI
                     VFQEDIQAQELYVFKENDEILGFICINEKFEPEFYKQVIFNKNYDDKAFYLHRLAVKQ
                     KAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(1712..2314)
                     /gene="leuD"
                     /locus_tag="SB502_000989"
     CDS             complement(1712..2314)
                     /gene="leuD"
                     /locus_tag="SB502_000989"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEG0434441.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(2316..3728)
                     /gene="leuC"
                     /locus_tag="SB502_000990"
     CDS             complement(2316..3728)
                     /gene="leuC"
                     /locus_tag="SB502_000990"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEG0434442.1"
                     /translation="MIMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSVDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLIAQYGTAKGTGYAIEFCGELIKNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ESITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALSYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(3715..4791)
                     /gene="leuB"
                     /locus_tag="SB502_000991"
     CDS             complement(3715..4791)
                     /gene="leuB"
                     /locus_tag="SB502_000991"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEG0434443.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFISQKYNFSFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERITHIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYQDINLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     AKSYLNTDEMGDCILEILKENNNG"
     gene            complement(4788..6323)
                     /gene="leuA"
                     /locus_tag="SB502_000992"
     CDS             complement(4788..6323)
                     /gene="leuA"
                     /locus_tag="SB502_000992"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEG0434444.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLGINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRALDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTLIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQIYEIISPSAIGIHDNRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYENEEENE
                     FVIEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARITNLKPVLKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGLSTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            6643..7272
                     /locus_tag="SB502_000993"
     CDS             6643..7272
                     /locus_tag="SB502_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434445.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTDSQICEKLLDDVEKYFIGGG"
     gene            complement(7308..7952)
                     /locus_tag="SB502_000994"
     CDS             complement(7308..7952)
                     /locus_tag="SB502_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEG0434446.1"
                     /translation="MNKKLLSIIASTTLFSNLALADENSGFFIGADAAWMHAQVKSEL
                     KHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGD
                     FTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG
                     ALYDLTPHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF"
     gene            complement(8090..8473)
                     /gene="queF"
                     /locus_tag="SB502_000995"
     CDS             complement(8090..8473)
                     /gene="queF"
                     /locus_tag="SB502_000995"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEG0434447.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            complement(8719..11253)
                     /gene="flgE"
                     /locus_tag="SB502_000996"
     CDS             complement(8719..11253)
                     /gene="flgE"
                     /locus_tag="SB502_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEG0434448.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDDQTIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGTSSRNLYALDSVHGWNTKTQRAEDENDTGTTQ
                     FYTTSKNAVEVTEKGVDAGSLFNANGQGLNLREGQGIWVSYADAKFTTDKPANVNVFD
                     PNNHTNQNGSIFWGDKDNAVILDITLNGVNIQNANIRSLDEAIAYINTFTAPTDTRDG
                     TGVKAVKKADGSGIEFVNDNADGTTDNMKNINLTVNQANTAGERHAITWNAGNNNFTA
                     TSAKNNANSVWIPTAANVNGNAESIQIITAHKYIYSSTPVDIPPMYNPDGGPNFIANG
                     NQRPTDPASANYWDAIQGSLKNATERTFRTTEDLRELLQRDARYGVDYDGNGSSGYDA
                     NDINQAVKVVVTENGNFAISNANETSTIPANAGAGAGAATTNPKNMSFNITAYSNKQG
                     TVSTNDAFTKIFKAFDGVLTVGGQIKESEQLKLSAFSAGLEIYDSLGSKHTLEVQFVK
                     QSTTQDGGNEWQMIIRVPEPAEINTTGEGPTNIIVGTARFNNDGSLANYTPKTINFSP
                     NNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNI
                     LGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKT
                     SALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
     gene            complement(11457..11939)
                     /gene="ruvC"
                     /locus_tag="SB502_000997"
     CDS             complement(11457..11939)
                     /gene="ruvC"
                     /locus_tag="SB502_000997"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEG0434449.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEADKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            12035..13357
                     /gene="dnaA"
                     /locus_tag="SB502_000998"
     CDS             12035..13357
                     /gene="dnaA"
                     /locus_tag="SB502_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEG0434450.1"
                     /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQNNKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAITHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDASLKAKIEELKNKILVKSQS"
     gene            13517..>14092
                     /gene="dnaN"
                     /locus_tag="SB502_000999"
     CDS             13517..>14092
                     /gene="dnaN"
                     /locus_tag="SB502_000999"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEG0434451.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFS"
BASE COUNT         4884 a         2499 c         1969 g         4740 t
ORIGIN      
        1 tttagataaa atttttaatg atattttaaa atacaatatt aaagacttag aagaaataca
       61 aactcgagtt aaatattata atcaaataaa tgaatttttt acacctacag caaaggaaaa
      121 aataggaaaa tttcctttta aaagcacctc ttatgctttt gatgcttatg aaatcagtaa
      181 atactttaaa gatgaatttt tatggaataa agaatttggc gatgtaagac atacttttaa
      241 agaagcaact atttgcaaat cgagatcttt ggaaaataat ataaataata ttttattaaa
      301 acttgataaa aataggcact tttgcttttt aaaagataac ataaactatg aaaataaaaa
      361 ggatatagca atatttagag gagcagtata tcaaaatcat cgaaaagaat tttttgattc
      421 ttattttggt agaacttttt gcgatatagg agatacttca aaacaaccta gccaatggga
      481 aaaaaacttt ttaaacaaaa aagaacaaat gaaatataaa tttataattt ctttagaggg
      541 taacgatgta gcaagcaact taaaatgggc tatgaattct aattctttag ttttagctcc
      601 aaaaataact tgcgaaactt ggtttatgga aggaacttta aaaccaaatt atcactttgc
      661 tttgattgat aatgagaatt tgtcagcagt aattgaatat tttaaaagtc gcccaaaaga
      721 tgcattggaa attattaata atgctcatca atatattaag aaatttttag ataagaaaaa
      781 agaattccat ataggaattt tggttttgac caaatatttt tattattcta gacaacttga
      841 acttaacaaa aaaagagata ttttagaatt aatcaaatag taaaattact ctcattaatt
      901 ctctaatttt tcataaaaaa taaatctttt tatacatata ttacatcata aattaaaaat
      961 ttgattttag ttttcagcca aaaacaagta atattgcgat aaaatctcag acttataaag
     1021 gggcattagc tcagctggga gagcacaacg ctggcagcgt tggggtcagc ggttcgaacc
     1081 cgctatgctc caccatatgg ttccgtagct cagctggtag agcactacct tgacatggta
     1141 gtggccgttg gttcaagtcc aatcggagcc accatcaccc ttccttatac aaaggattat
     1201 catgcaaaac actatcatac aaaaagccgt caataaagat ttaaattcta tacttgaaat
     1261 cacaaaagat gctttaaatg ctatgaaaac tatgaatttt caccaatggg atgagaatta
     1321 tcccaatgaa atagtttttc aagaagatat acaagcacaa gaactttatg tgtttaaaga
     1381 aaatgatgaa attttaggct ttatctgtat caatgaaaaa tttgaacctg aattttacaa
     1441 acaagttatt tttaacaaaa attatgatga taaagccttt tatctacacc gtttagctgt
     1501 caaacaaaag gcaaaaggca aaggcgtggc acaaaaactt ttaaattttt gcgaaaattt
     1561 tgccttggaa aatcacaagg caagtttaag agcagatact catagtaaaa attttcctat
     1621 gaattcgctt tttaaaaagc ttgattttaa tttttgtgga aactttgaca tacctaatta
     1681 ccaagatcct tttttagctt atgaaaaaat tctaaaccaa aaagcttttt gagttttttt
     1741 cataggcttt gatttgtgct tcatgtttta aagttaaagc tatattatca agcccttcca
     1801 aaagacaaat tctgtgaaaa tcatctaaat caaaagaaaa aatcttatct ttaaaaaata
     1861 ctcttttttc caacaaagaa atttctatat ttttatcttg ggattttttt aactcatcaa
     1921 ctatttccaa aacctcatct ttagcaagtt ctatagtgag caaaccgttt cctaaggcat
     1981 tgtttttaaa aatatccgca aaagaaggtg cgataatagc tctaatacca taatcaacca
     2041 aagcccaagg cgcatgctct cttgaagagc cactaccaaa attttcaaaa ctcaccaaaa
     2101 tagagctatt ttgatattct tttttattga gattaaaatc catatttaaa acactttctt
     2161 tatcatctaa ataacgcaaa tcatggaaca aatgcttgcc aaaaccttgc ttagacactg
     2221 caagtaaaaa ttgcttaggt ataatttgat ctgtgtctat attggcatat tctaaaggac
     2281 aagctatacc tttatgtata ataaattttt gcatattaaa ctcctaaata ctttctatta
     2341 tcacaaataa caccttctat ggcacaagct gccgcacttg caggactcat caaatgagtg
     2401 atagaacctt taccttgtct gcctacaaag ttacgatttg aagttgaagc aactctttga
     2461 cctgaatttg ctttgtcatc attcatacca agacacatag aacaccctgc atatctccac
     2521 tcacaccctg cctcgataaa aatcttatcg agtcctaaat tttcagcttc ttttcttact
     2581 tgcattgaac caggcacgat taaagcttta acatttttat gaattttgcg cccttttaag
     2641 atatcagcgg ctattttaag atcttctaaa cgcccatttg tgcaagatcc tataaataca
     2701 atgtcgattt ttaccccttc tataacttga tcttgctcta aatttacata agataaagca
     2761 tcaagcaaag atttttgctc actttgattt ttaaaatcac ttatttttgg aattttttca
     2821 tctataccaa tcacttgcga agggtttgtt ccatagctaa tttgtggttt tatcttgctt
     2881 acatctagag taatactctc atcatatttt gctccttcat cgcttcttaa actcttccaa
     2941 tactcgcaat acttttgaaa ttcttctcct ttaggtgcaa attcctttcc cttaatatac
     3001 tcaaaagtga tctcatcagg agctatcata cctactttag ctccaaattc tatagccata
     3061 ttacaaagag tcattctagc ttccatgctt aaatttttta taagttctcc acaaaattct
     3121 atagcataac ctgtgccttt tgctgtgccg tattgtgcga tcaaatacaa aatcaaatcc
     3181 ttagcataaa cgcctttttg aaactgccct ttacattcga ttttcatagt tttaagtttg
     3241 gcttgtttta aagtttgcgt tgccatgaca tgctctactt cactcgtgcc tataccaaag
     3301 gctaaagctc caaaagcccc atgtgttgcc gtatgagaat ccccacaaac taaagtaacc
     3361 ccaggtaaag taaagccaag ctcaggacct actatatgaa ctatgccttg atttttatct
     3421 ccaagtccta aaagccttac tccaaattcc ttagtatttt gcatcaaagt tgtaatttgc
     3481 tcttttgcca tatcagaaca agcatttaaa tccacgcttt tagttgaaac atcatgatct
     3541 atggtagcca aagttaaatc cgctcttgcc attctacgct tagccatttt aagccctgaa
     3601 aatgcttgag ggcttgttac ttcatggatt aaatgtctat cgatataaag tataggaagt
     3661 tcgtttttgc cttcataaac cacatgagca tcaaagactt tctcatataa agttttagcc
     3721 attattattc tcctttaaaa tttctaaaat acaatccccc atttcatcag tatttaaata
     3781 cgacttagca tttaaatcct tagtcatttt tccttgtgcc aatgccaaag atatagcatt
     3841 ttctatatcc tgtgcggctt gttcttcttt gaaactatac tttaacatca aagccgcact
     3901 taaaatttga gctatgggat tagctatatt taaatgagct atatcaggtg cacttccacc
     3961 tgctggctca taaagtccaa aacctttatc gtttaaactt gctgaactta acaaacccaa
     4021 agatccatta atggcagcta actcatcgct caaaatatca ccaaaaagat ttgaacaaag
     4081 cataacatca aaaatgctag gattttttac aatctgcatc gcagcattat ccacatacat
     4141 gtactctaag tttatatctt gataatcttt tgcaacattt gccaccactt ctcgccacaa
     4201 aatagaactt gctaaaacat ttgctttgtc gattaaatgc acttttttct ttcttattct
     4261 tgcactttca aaagcgatat gagttatcct ttctatctct tttttagtgt aaatttcagt
     4321 atcatacgca ctttctttgc ctaaatcttg cttaccaaaa taaatcccac ctgtaagctc
     4381 tctaacacat aaaatatcca ctcctttttg gataatctca ttttttaaag gtgaagcatg
     4441 agttaaactt tcataaattt tacaaggacg caaatttgca aacaaattaa aatgctttct
     4501 taaaggcaaa agcgaggctc tttcaggtct ttgatctatg ggcaaattat cccatttagg
     4561 cccacccaca gaaccaaata aaatcgcatc actttgctca caaagcttta aagtttcatc
     4621 acttaaagcc actccataag catctatact tgcaccgcct attttagctt cattaaattc
     4681 aaaactaaaa ttgtattttt gtgagataaa agttaaaatt tttaaagcct ctttcattac
     4741 caaaggccct ataccatctc ctgctaagac agctacttta taagttttca tgccattttc
     4801 ctttcttcta cttttaaaga gcgataaatc gcattgtaag cactcacaaa agcttgtgct
     4861 gaagcttcta taacatctgt tgaaagtcct tttccatgga attttctccc tttaaattcc
     4921 aaatccacat ccacttgccc ttgagcatct actcctgaac tttttgcatt gatactataa
     4981 gcttttaaca caggctttaa atttgttatc ctagcaatgc agttaaaaac tgcttcaaca
     5041 ggaccatttc ctgtgcaagc ttcagttttt aactcttctt taatacgcat acaaacacaa
     5101 gcagttggga tattgccact aatcacgctt aatttttcaa tcacaaattc attttcttct
     5161 tcattttcat agcttaaaaa catcaaagct tccaaatcat aatcatatac ttgacccttt
     5221 ttatccgcaa ggcgtaaaaa acgctcataa acatcatcta aattataagt attttcatca
     5281 tagcctaaat tttcaaggca agtttttatc atagcccttc cacttcttgc cgtcattaac
     5341 atacgattgt catgaattcc tatggcacta gggcttatga tctcgtaaat ttgcctattt
     5401 ttaagcactc catcttgatg aatgcctgaa ctatgagaaa acgcattgct acccactata
     5461 gctttatgcg aaggtatgct ttcattagtg atagctgaaa ctaattttga agttttaaag
     5521 atattttcac atttaatatc agtataaaaa ccttttaaat aatctttcct agtttttatc
     5581 gccataacca cttcttctaa agcacaattg cccgcccttt cgccaagtcc atttatagtg
     5641 cactctatct gtcttgcacc ttgtaaaata gcacttaagc tattgcccgt tgccatacct
     5701 aagtcattgt gacaatgcac agaaatgata gctttgtcta tatttggcac tttgttaaat
     5761 aaaattttga tgatattagc aaattcactt ggcaaggtat agcctacggt atctgggata
     5821 tttatagttt tagcgcctgc ttttatcgca ttttccacca taaaacaaag attatctatc
     5881 agagttcttc ctgcatcttc gcatgagaat tctacatcat cagtataaga tcttgctctt
     5941 ataatcgctc tttttgccat agacaaaatt tcatcaaaat ctttttttaa tttatcttgc
     6001 atatgcaaag tcgaagtggc tataaaagta tgaattctaa aatgctttgc cacttttaaa
     6061 gcttcataag ccatatctat atctttatcc aatgctctag aaagtgcaca aatagttgag
     6121 tttttaacct tagaagcgat cttttgcacc gctttaaaat ccccttgtga agataccgga
     6181 aaacctgctt ctataacgtc tacgcctaaa ttttcaagcg ctaaagcgat ttgtaatttt
     6241 tgattgatac ccaaagaact gcctaaagct tgttctccat ctcgcaaagt ggtatcaaag
     6301 attatgattt tattatcttt catgatttaa tcctttaaaa ccaaacagac tgaatgaatt
     6361 aaaaattcaa aaacttaaca acaatgataa aaaattaaaa atgtaaaaaa tgattaaaaa
     6421 taaaattgag ttttagagtg agagttgcag tagcagatta aaagtattgt ctttactttt
     6481 ttgttggact gaatttgaaa tttcaaaaat ttgtttcatc ttttcctcct ttgttaaaat
     6541 taatacttaa tgtatcatat ttttagtaaa tgtgtttgta aaattcttaa attaagaaaa
     6601 ttattgatat aattgtaatt ttaagtaaca aaaaggaagt tgatgttaaa agaactctta
     6661 gagattaaaa aagaaatgga acctgttatc cacgaagcca atgtgaaatt aaatgtccta
     6721 gctcgtgaag tcatagtccg aaaaaaagaa tacgaaattt atgggcctat ggtagatcgt
     6781 gtttatcttg ataatgccat ttatgttaaa gttatgtcaa gtggacgcga tgtaaaaaca
     6841 gacaatgtga ctataaaaaa tggtttttat atggtttttg ttgcccctga aaaagaaagt
     6901 acaaaagata tcaaaaataa actcaaagta gcttatgaag gacttgataa caaatttatc
     6961 gctacactta tacgatcttg ccaacgcttt aaagagatca taaacaaaac ccaagctaca
     7021 cttgctaaag cttctaaaat gaatgtagta gtaaaaacga atttaggtga agcaagtgct
     7081 gctctaaaat ttaacatcac tatagaatat actaaagaga atcaaaaact cactcgtgaa
     7141 aattcaaaat cagcaggaag tttcagagat actaaaactt atatcaatct tgtagtagaa
     7201 aaaaatacag attctcaaat ttgtgaaaaa ctacttgatg atgttgaaaa atactttatc
     7261 ggtggaggtt gatttcatta atgcaagtta taaaaacttg cattagatta aaatttataa
     7321 ttatatccta aatatacacc ataatttgtt tgtttaggat cgtaaaagtt tgaacccact
     7381 ttattttgat aaaaatttct agaattataa tgaatttgct ctgctttaaa gcctaattct
     7441 atttcattat gtggtgtcaa atcatataaa gcacctattt tcgctccata aaaataaccg
     7501 tcaaaatttt gcgacaaaga taaaaagctt gtttttaagg taagatctgt tcttgcatat
     7561 cctccataca cacctaaaac agctctggtt ttttcaaaaa gcttaggagt aaaatcataa
     7621 cctgttaaaa atttatgtgt agtaaaatca ccttcgattt gaattttagg agttttgata
     7681 aaatcactaa attcatcaga ataattataa ccagcataaa ttctatgatt ttcatttaaa
     7741 cgatatccaa gttttagacc aaacgatggt atattacctg aaatatctcc attaaaattt
     7801 tgctttgtat tcttatgttt taactcactt tttacttgag catgcatcca agctgcatca
     7861 gcacctataa aaaaaccaga attctcatct gctaaagcca aatttgaaaa caaagtagta
     7921 cttgcgataa tgcttaataa ttttttattc ataacctaac tccttataat aaaattcgat
     7981 ctaaaaaatt tagatctttt tatattatat attcttcaaa gattaaataa gaatttttga
     8041 taaaatactt aatctttgca taaaaatatg ttaatatttt actcaaatat tattttggca
     8101 ctaccatatc gctacgacat tctatcaccg tatgtacatt tccacgcggg ttaaaatccc
     8161 ccacaacttt aatccatttt ggttttaatt tatcttttaa agtattgtaa atttcattga
     8221 tacttgcttc atgtgaaaca tttctataca taaaagtatt gatataaagt tttatcgcct
     8281 taagctcaac cacaaattta tcaggcatat actcaagata aatcgtcgca aagtcaggat
     8341 aacccgaacg cggacaacaa cacataaatt caggtaaagt gattttaatg atatagtcat
     8401 ttttcgcatc atttggccaa atttccatat tttctacatc aaattctttg atttcttttt
     8461 caccataacg catagatttt ccttaaattt aaattcaagc aaaaattata acaaaataag
     8521 tttttaaaac gattatgata cagataagaa aatgcaattt tattgcaact cacccctagc
     8581 aagagtgagt tagcaataaa ttgaaggcag ttcaagccta agcctagtat tacaagacta
     8641 ccaagatagg cttgtaaagc aaggcttgct cccttaaagg gagcaaaaaa caatatttta
     8701 tagaatacta agcttaaatt attgtttaag ctggattaga gtttgaagca tttgatcact
     8761 cgttgaaatg gtttttgaat ttgcttgata acctctttga atgataataa gctctgttaa
     8821 agaacgactt aaatccacat ttgacatttc aagagctgag gttttcattt caccacgacc
     8881 tcctgttcct gcttcgccta ctacgatatt accactattt gcagtgactt taaaaagatt
     8941 tccaccaatt tcctcaagac ctgagttatt tgccactgaa gccattgcta tttttgctac
     9001 agcaaaggtt ttgccattag taaattcacc taagatatta cctttgtcat ccacacggat
     9061 agcatcaggt tttaagttac ctgaagtata accatcagtt gcctgtcctg ttagagttga
     9121 agcagaattt gagcttacaa ggccatcatt gcttccactt gttccaaagg aaagtttgat
     9181 ttgttgattt ggtgcagcac cgttatttgg tgaaaaattt atcgtttttg gtgtataatt
     9241 agctaaagat ccatcattat taaatcttgc tgttcctacg atgatatttg taggaccttc
     9301 acctgtagtg ttaatctctg caggttctgg tacacggatg atcatttgcc attcattacc
     9361 cccatcttga gtggtgcttt gcttaacaaa ctgcacttct aaagtgtgtt ttgaacctaa
     9421 ggaatcgtaa atttcaagtc ctgctgaaaa agcagaaagc ttaagttgtt cgctttcttt
     9481 gatctgacct ccgactgtta aaactccgtc aaaagcttta aaaattttag taaaggcatc
     9541 attggtactt acagttcctt gtttattact ataagcagtt atattaaaac tcatattttt
     9601 tggatttgtt gtagcagcac cagcaccagc accagcatta gctggtatag tagaagtttc
     9661 atttgcgtta gaaatagcaa aattaccatt ttcagttacc actactttta cagcttgatt
     9721 gatatcatta gcatcatatc ctgaacttcc atttccatca tagtctactc catatctagc
     9781 atctctttgc aaaagctctc ttaaatcttc tgtggttcta aaagttcttt cagtagcatt
     9841 ttttaaactt ccttgtatag catcccaata attagcagaa gcaggatctg taggtctttg
     9901 attaccatta gcaataaaat ttggaccacc atctggatta tacataggag gaatatcaac
     9961 tggggtagag ctataaatat atttatgagc cgttattatt tgtatgctct ctgcgttacc
    10021 attcacatta gctgctgttg gaatccatac agagttagca ttgtttttag cacttgttgc
    10081 tgtaaaatta ttatttccgg cattccaagt gattgcatgt ctttcccctg cagtattagc
    10141 ttgattaaca gttaaattaa tatttttcat attgtcagta gtaccatcgg cattatcgtt
    10201 gacaaattct atacctgaac catctgcttt ttttacagct ttaactcctg ttccatctct
    10261 tgtatccgtt ggtgcagtaa aggtattgat ataagctata gcttcatcta aacttctaat
    10321 atttgcattt tgtatattta caccatttaa ggtaatatcc aaaattacag cattatcttt
    10381 atcaccccaa aaaatagatc cattttgatt agtatggtta ttaggatcaa aaacattaac
    10441 attagctggc ttatctgtag taaattttgc atccgcataa gacacccaaa ttccttgacc
    10501 ttctcttaaa tttaaaccct gtccattagc attaaaaagt gatcccgcat ccacaccctt
    10561 ttccgtcact tctacagcat tcttagaagt cgtgtaaaac tgagtagttc ctgtatcatt
    10621 ttcatcttct gctctttggg ttttagtatt ccatccatga acagaatcaa gtgcataaag
    10681 atttctactt gaagttccta tatttaaacc gctatttaaa ttcgctttga tggctacttc
    10741 tgtggatttt gctgcaggga tatgcatacc tggatcgata aaaatatttt gtggagttct
    10801 tgaactatct atagtttgat catcccagtt gatattccac ccttgaacta caaagccggc
    10861 attattgaca aaatttccat aagcatcaag tttaaaatcc ccgctccttg taagatagtt
    10921 tgtaagcccc ccatcatcac tcaccataaa aaaaccatca ccatttatag ccacatcagt
    10981 gtttttatct gtggtttgaa ctgaaccttg agaatgaatt ctagttgtag aacttactga
    11041 aacgccaaga ccaatttgaa gtggattaga tccacctctt ccatcagttg gagctgtagc
    11101 gattttcaca gtttggctaa acatagtccc aaaatctgca cgggagtatt taaaaccagt
    11161 ggtattaaca tttgaaatgt tattaccttc aacatccatc gcaacttgat gtgcttgtag
    11221 tccgcttacg ccagaccaaa gtgatctcat catcttaaat cctttataaa atattgcttt
    11281 aaaaaattta acgctttggc tttaaaaaac ttttgcgttt atgtgaagtt tacaagcaag
    11341 ttctgttcca acttttgaaa ttttttatga attttttaaa aatttataga aaaaatttaa
    11401 aggtattttg ggagtttatg aagctttggg cttttgtgta ataaaaatta ctaaaatcac
    11461 accctaactc ttaaatttgc tgcatgggtt aaagctactg caatagcatc tgtgatatcc
    11521 aaaggcttga tatctttact aagtcctaaa agccttttta ccataaaagc aacttgttct
    11581 ttagttgctt tggcttttcc tgtaacggct ttttttactt gtaagggagt gtattctgca
    11641 aaatctccat gaatttgaag aatttttaaa gatagggctc cgcgaaattg tgcgagtttt
    11701 aaaacggttt ttggattgta agcaaaaaag atatcttcta tagccacttc atcaaaagaa
    11761 tgatttttaa aaatcaagtc caaaccctcg caaagctctg tgatttgata ctgtaaggta
    11821 cttggcttta tctttataag tcctgcttct atgagaatgt tttttccttt gtcagcttct
    11881 atgatagcat aaccgcaatt tcttgaacct ggatctatac ctaaaatttt caaattcata
    11941 ccttttgaaa aataaaatac aaaagcggat tttaaccttt ttttatgaaa tttaagataa
    12001 aatttataca ttatgcaaaa tttaaagaga gattatgaat ccaagccaaa tacttgaaaa
    12061 tttaaaaaaa gaattaagcg aaaacgaata cgaaaactat ctatcaaatt taaaattcaa
    12121 cgaaaaacaa agcaaagcag atcttttggt ttttaacgct ccaaatgaac tcatggctaa
    12181 attcatacaa acaaaatacg gcaaaaaaat cgcgcatttt tatgaagtgc aaagcggaaa
    12241 taaagccatc ataaatatac aagcacaaag tgctaaacaa aataacaaaa gcacaaaaat
    12301 cgacatagct catataaaag cacaaagcac gattttaaat ccttctttta cttttgaaag
    12361 ttttgttgta ggggattcta acaaatacgc ttatggagca tgtaaagcta taacacataa
    12421 agataagctt ggaaaacttt ataatcctat ctttgtttat gggcctacag gacttggaaa
    12481 aacacattta cttcaagcag ttggaaatgc aagcttagaa atgggaaaaa aagttattta
    12541 tgctacgagt gaaaatttta tcaatgattt tacttcaaat ttaaaaaatg gctctttaga
    12601 taaatttcat gaaaagtata gaaactgcga tgttttgctt atagatgatg tgcagttttt
    12661 aggaaaaacc gataaaattc aagaagaatt tttctttata tttaatgaaa tcaaaaataa
    12721 cgatggacaa atcatcatga cttcagacaa tccacccaac atgctaaaag gtataaccga
    12781 acgcttaaaa agtcgttttg cacatgggat catagctgat ataactccac ctcaactaga
    12841 tacaaaaata gccatcataa gaaaaaaatg tgaatttaac gatatcaatc tttctaatga
    12901 tatcataaac tatatcgcta cttctttagg ggataatata agagaaatcg aaggtatcat
    12961 cataagttta aatgcttatg caaccatact aggacaagaa atcacactcg aacttgccaa
    13021 aagtgtgatg aaagatcata tcaaagaaaa gaaagaaaat atcactatag atgacatttt
    13081 atctttggta tgtaaagaat ttaacatcaa accaagcgat gtgaaatcca ataaaaaaac
    13141 tcaaaatata gtcacagcaa gacgcattgt gatttaccta gctagggcac ttacggcttt
    13201 gactatgcca caacttgcga attattttga aatgaaagac catacagcta tttcacataa
    13261 tgttaaaaaa atcacagaaa tgatagaaaa tgatgcttct ttaaaagcaa aaatcgaaga
    13321 acttaaaaac aaaattcttg ttaaaagtca aagttaagtg aaaggatgtg aaaaataaat
    13381 tctagagtgt gaaaaaaaga aattaagcaa agtatgataa aatacaaatt tgattatttt
    13441 gctttgaaga atttcacaat ttcaacaagc ttattattac aacgaattta aaattaaaat
    13501 aaaccaagga gaaaaaatga agttaagtat caataaaaat actttagaat ctgcagtgat
    13561 tttatgtaat gcttatgtag aaaaaaaaga ctcaagcacc attacttctc atcttttttt
    13621 tcatgctgat gaagataaac ttcttattag agctagtgat tatgaaatag gtatcaacta
    13681 taagataaaa aaaatccgcg tagaatcaag tggttttgct actgcaaacg caaaaagtat
    13741 tgcagatgtt attaaaagct taaacaatga agaagttgtt ttagaaacta ttgataattt
    13801 tttatttata agacaaaaaa gcacaaaata caaacttcct atgtttaatc atgaagattt
    13861 tccaaatttt ccaaatacag aaggaaaaaa ccaatttgac attgattcaa gtgacttaag
    13921 tcgttctctt aaaaagatat taccaagtat tgatacaaac aacccaaaat actccttaaa
    13981 tggtgcattt ttagatataa aaacagataa aattaacttc gtaggaactg atacaaaacg
    14041 ccttgcaatc tatactttag aaaaagcaaa taatcaagaa tttagtttta gt
//
LOCUS       DARATF010000043        13886 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.043, whole genome shotgun sequence.
ACCESSION   DARATF010000043 DARATF010000000
VERSION     DARATF010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13886
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.043"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..135)
                     /locus_tag="SB502_001000"
     CDS             complement(<1..135)
                     /locus_tag="SB502_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEG0434452.1"
                     /translation="MGLKAYLDGILGEDKACKFLKKQGFEILKRNFYSKFGEIDIIAK
                     K"
     gene            complement(135..1382)
                     /locus_tag="SB502_001001"
     CDS             complement(135..1382)
                     /locus_tag="SB502_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEG0434453.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVAEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFKQALQIAQNLGYAEADPTFDIEGRDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYELLSKDEIYT
                     KYYLRVKVEDKIGVLSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRID"
     gene            complement(1386..2588)
                     /locus_tag="SB502_001002"
     CDS             complement(1386..2588)
                     /locus_tag="SB502_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEG0434454.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPRPKYIVVNFPHNPTTVTCEKSFYERLITTAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(2600..3406)
                     /locus_tag="SB502_001003"
     CDS             complement(2600..3406)
                     /locus_tag="SB502_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434455.1"
                     /translation="MVKKIIILTFWVNISFAISSLELAKNLVNNPSKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPQSLKLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYIDNIKRIGAYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(3400..4338)
                     /locus_tag="SB502_001004"
     CDS             complement(3400..4338)
                     /locus_tag="SB502_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434456.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSSNAWPFLIV
                     LIVLVIIGSGIYYFDTLKTFFKDEQNNTSATVIDIIGQAQENLKSLSGNNVVVIDNNK
                     AQETNQTESVLPSQNTSLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTLKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPVGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(4331..5014)
                     /gene="rlmB"
                     /locus_tag="SB502_001005"
     CDS             complement(4331..5014)
                     /gene="rlmB"
                     /locus_tag="SB502_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEG0434457.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIAISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLNSKIIKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(5028..5852)
                     /gene="rsmI"
                     /locus_tag="SB502_001006"
     CDS             complement(5028..5852)
                     /gene="rsmI"
                     /locus_tag="SB502_001006"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEG0434458.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(5855..6055)
                     /gene="rpmE"
                     /locus_tag="SB502_001007"
     CDS             complement(5855..6055)
                     /gene="rpmE"
                     /locus_tag="SB502_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEG0434459.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(6134..6790)
                     /locus_tag="SB502_001008"
     CDS             complement(6134..6790)
                     /locus_tag="SB502_001008"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEG0434460.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(6792..7199)
                     /locus_tag="SB502_001009"
     CDS             complement(6792..7199)
                     /locus_tag="SB502_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434461.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(7199..7624)
                     /locus_tag="SB502_001010"
     CDS             complement(7199..7624)
                     /locus_tag="SB502_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEG0434462.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSSDDEHEVNPSIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLSNKIFIQKIKTIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(7624..8205)
                     /locus_tag="SB502_001011"
     CDS             complement(7624..8205)
                     /locus_tag="SB502_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEG0434463.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMPKISLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(8202..8945)
                     /locus_tag="SB502_001012"
     CDS             complement(8202..8945)
                     /locus_tag="SB502_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEG0434464.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKQDLNPIVVITGGEPLIHYENP
                     EFIEFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(8948..9910)
                     /gene="moaA"
                     /locus_tag="SB502_001013"
     CDS             complement(8948..9910)
                     /gene="moaA"
                     /locus_tag="SB502_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEG0434465.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMINDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDILDSVLSGIDEVLNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(9923..10438)
                     /locus_tag="SB502_001014"
     CDS             complement(9923..10438)
                     /locus_tag="SB502_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434466.1"
                     /translation="MSDDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(10435..10932)
                     /locus_tag="SB502_001015"
     CDS             complement(10435..10932)
                     /locus_tag="SB502_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434467.1"
                     /translation="MELALFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(10923..11807)
                     /locus_tag="SB502_001016"
     CDS             complement(10923..11807)
                     /locus_tag="SB502_001016"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HEG0434468.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAF
                     CHILAVLFWLLFVWEVWGVALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
     gene            11878..12747
                     /gene="miaA"
                     /locus_tag="SB502_001017"
     CDS             11878..12747
                     /gene="miaA"
                     /locus_tag="SB502_001017"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEG0434469.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIQTRTKEMLDNGLLDEAKILFSKFD
                     YKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALATLRMKFSIEK"
     gene            complement(12733..13296)
                     /locus_tag="SB502_001018"
     CDS             complement(12733..13296)
                     /locus_tag="SB502_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEG0434470.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNINLLLAIFLIGIITFILCIIALKIGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
     gene            13444..13518
                     /locus_tag="SB502_001019"
     tRNA            13444..13518
                     /locus_tag="SB502_001019"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13477..13479,aa:Glu,seq:ttc)
     gene            complement(13654..13836)
                     /locus_tag="SB502_001020"
     CDS             complement(13654..13836)
                     /locus_tag="SB502_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434471.1"
                     /translation="MKKVVLISALLGAFAANVFAADTPSDVNQTHTKAHHSKAKADKK
                     HEAKTHKKTKEQTPAQ"
BASE COUNT         4709 a         2204 c         1750 g         5223 t
ORIGIN      
        1 ttttttggct attatatcga tttctccaaa tttagaatag aaatttcttt ttaaaatttc
       61 aaagccctgt ttttttaaaa atttacaagc cttatcttca cctaaaattc catctaaata
      121 agcttttaaa cccattaatc tatacgcatc ataaaaggtt tggtttttat aaaatcttgt
      181 ttgcgtaaaa tttcaagcaa attttgtatg cttttttcat aagttaaatg cgtagtaaaa
      241 aacaaagtac tgtaattttc atcatttttt ttaggttttt gtaagaaact atcgatagaa
      301 atattatttt cactcatcaa ttgtgtgatt ttagataaaa cccctatttt atcttcaact
      361 ttcaccctta aataatattt tgtataaatt tcatctttgc ttaaaagctc gtattctaaa
      421 gtgttcacaa aaccaagcat tggtgctttt acctgatctc ttgctatatc cataagatct
      481 gaaatcacag cacttgcagt ggcctctcct cctgctcctg ctccataata caaactttca
      541 cccaacaaat ctccattaat gcttatagca ttcatcactc catcaacttt tgcaagcatt
      601 ttttctttat ctatcatagt aggatgcacc cttaattcta ctttattttc acgcacctta
      661 gctataccta aaagttttat ggtaaattca aactcattag caaaatacat atcttcaggt
      721 gcaatttcac taataccctc gatcaaaata tcttcaggtt tagctttaag attataagcg
      781 atacttgata aaacaagcag tttatgtgct gcatctcgcc cttctatgtc aaaagttgga
      841 tcagcctctg cataacctaa attttgagct atttgcaaag cttgtttaaa actcatattt
      901 ttttgactca tagaacttaa aatataatta ctcgtaccat ttaaaatccc ttttatagcc
      961 aaaatattat ttgcacttaa accttctttt aaaaccttga taataggaat tcctccagcc
     1021 acacttgctt cataaccaaa agctaaattt ttagccaaat tttcaagttc ataacgatga
     1081 taagcaagca tagctttatt tgcagtaaca acagcttttt tcttttttaa aatttcactc
     1141 actattttaa aagcttcatc caccccaccc attaattcta caaaaacatc tacatcagca
     1201 tttaaaattt ctgcaacgct atgagtaatt ggaattaaag catttttttt aggacttcta
     1261 gcaagagcga tcacaggagt tatgctttgc ccacatcttg cacgaataag tttatcattt
     1321 tctaaaagaa atttaaccac cgcacttcca acagtgccat aaccaagaat cgctactttc
     1381 ataacttatt cttttaaata ttttttgata ttgcgtgcag cttggcgtat gcgattttca
     1441 ttttcaatta aagcaattct tacatactca tcacctgctt cgccaaaacc taccccagga
     1501 cttactgcaa cactggcacg ctgtaaaagt tgctttgaaa attctaaact ttttaaatgt
     1561 cttttgcttt cagggagttt tgcccaaaca aacatacttg ctcttggttt ttgaagtttc
     1621 cagcctgcat tttcaaaagc ttcaagtaaa atgtgcattc ttttatcata agttgcacgg
     1681 atttcatcca cacaagtttg atctccatct aaagctatgg tagctgctac ttgaataggt
     1741 gtgtacatac cataatcaaa ccaagatttt atttttttaa gcgcactgac taagcgttta
     1801 tttcctacta caaaacccac acgccagcct gccatattgt aagattttga aagagtgtaa
     1861 gtttctaccg ctacatcttt tgcgccttca atttccaaaa tagaaggagt tttatagtca
     1921 tcataagtta aatctgcata agcaatatct gaaataatat aaaatctttc tttttttgcc
     1981 gttgttatca atctttcata aaaacttttc tcacaagtta ctgttgttgg attatgcggg
     2041 aaattaacaa cgatatattt tggacgcggg atgctttcat ttaaagtttt atgtaaattt
     2101 tcaaaaaatt gattttcatc aagctcaaat ttttcattat aagctaaagg catttttgct
     2161 acattacctc ctgctataat aaaagcttga gtatgtatag gataagcagg agttggcaca
     2221 atagcaacat ctccaggatt tataatcgct cttgcaagat ttacaaaacc ctcttttgaa
     2281 cccatggtag ctacaacttc attttcagga tctaaattga cattatattt tcttttatac
     2341 caattacaaa ttgctaagcg aagtttataa atccccatgg atgtagaata tcccgaggtt
     2401 ttatctttgt tagcactttc acaaagttta tctataatgt gttgtggagt tttaccatca
     2461 ggatttccca ttgaaaagtc gatgatgtcc tctccagcac gtcttgctgc catttttatc
     2521 gcatttacct ctgcgaaaac ataatttgga agtctttcta tggtattaaa acggatttca
     2581 tcaaacattt cttaatcctt tattttttaa gtgtgatttt taaacccctg cgtatattat
     2641 ctaaactata catatcgctt acaatagcat atatagcacc atttggaata agttctgaaa
     2701 aatgattatt tttattttcg ctttttactg ctttaattag attcagattt ttatctaaaa
     2761 agaagatttt aggaaaccaa ttgtctaaat catttgcatc aataatcaaa tttgtagcat
     2821 tttttaaatc aagcacatag tctttaaggg gtttttctaa tgattttgga gtatttaaat
     2881 taacatttgt attggttttt aatacagcat tggaaaaatt taaatcatat tcatagtcat
     2941 atgctccaat gcgcttaata ttatctatat agacagaatt ttcttttaag agattgtaaa
     3001 gcgttccagg atctaaaaca tattgagatt ctacttgtat ggtatagtca atatttcctt
     3061 ctcttaaaat caaatctgta gggataaaat atatatatcc ggcatctgtt aaaacatcgg
     3121 ataaaatttt aaaaaacata acttcatcag cttttgcttt aaaatttagt tttagacttt
     3181 gaggatttga tagtgttaag gcaattaaag aattggtttt taatatttga gatatttttg
     3241 caatatcaca atttccatta ttatctatgt aagaattatt tgagaataat aattctagtt
     3301 gagaattttt actaggattg tttactaaat tttttgctaa ttcaagactt gagattgcaa
     3361 aagatatatt aacccaaaaa gtaagaataa taattttttt taccattctt tacctttatt
     3421 taattttaca aattcagcag ctgaaatact ggtaattttt ccatctttaa tcaagaaacg
     3481 ttttgaaatt cctacaggaa atttttgttc tttattttct tgatcaaaca ttgttaaagc
     3541 tgcagcccct gttaaaatta actgatcttt atctaaagaa atattaaaat ctttttcttt
     3601 aacaaagctt gtttttttaa ggctttttaa atctatcaaa cctatccaaa tcttggtaga
     3661 ggttttaaaa tgtgcttctt ttaaagaatc agtttttagt gtatttgtgt cttcttggat
     3721 ttgggtattt ttttcttcat cgagtagagt tgtgttattt tcactgatat tattttctat
     3781 gcttatgttt ttatcatttt cttgtaatga ggtgttttgg cttggtaaaa cgctctctgt
     3841 ttgatttgtt tcttgtgctt tattgttgtc tataacaaca acattgtttc cacttaaaga
     3901 ttttaaattt tcttgtgctt gtcctattat gtctataacc gttgcactag tattattttg
     3961 ttcatctttg aaaaaagttt taagtgtatc aaaataataa attccacttc ctataatcac
     4021 taaaacaata agaacaatca aaaaaggcca agcgttagag gatttttgac tataagcatc
     4081 tagttttggg gttatcattt ttgattttgt ttgtggagta ggattgtttt cgttaagata
     4141 agcttcatac tcttcgttaa aatcactaaa gtcgagttcg tattctctgc ttaaaatttt
     4201 aacaaaacct ttaacattaa aacgacttaa aacagcaaaa ttcttttcta ctaaagcttc
     4261 aagaaaatca agttcaattt gcgtttttgc tgcaacttct tttaaattta attcttgtat
     4321 ttttttccaa ttaagcattt aacatcctat cacaaagtat tgcaaaagca gcgctgacat
     4381 taagactatc aaaattattt ttcatcgcaa tgcccacaca ttcatcgcac ttttttataa
     4441 ttttagagtt taaaccaaaa ccctcactac ccaaaactaa aactttttta ccattgctta
     4501 tttttacact gtgaatttct tttcccgagc catcgctcgc ataaaaataa aaacctactt
     4561 gttttagttc gtttattaca cttaaagcat cgttgcttat tgcaataggt aaatcaagag
     4621 ccgctccgct gcttgtgcga attactcctt ccatggctaa tttttcacca ataaaaatta
     4681 aagccccaac ccctaaagca taagctgtac gcgtgatagc ccctatattt cctacatcgc
     4741 taattccata aagcataaca ataaaatcat tttttttgat ctcatttaaa ttcgcaaaag
     4801 aactttcttt aatatctagc aaaaaacctt gatgatttcc acctttcgca taagcttgag
     4861 cagttttaaa atcaagtttt ttgattttaa aacctgattt tgcgattttg gaaaaagtaa
     4921 ttttatcaca ttcttttgct aaataaagct cattgataca gtctttatga tattctaaaa
     4981 tataaaaaaa tatttgcttc ccataaacta tcatattaaa attttaccta atcttgactt
     5041 aaaagcagtt tttgataaat ttcttttgca ttttttccat tgatctttga taataatttt
     5101 gcttttgctt ttaaagacag ctctaaatcc ataatatctt tttcacaaag agtattttgc
     5161 aaaaaatttt gctcttttga ttgcagtact acaacccatt caccgtttaa attagacttt
     5221 tttaaaattt cagaaagctc tttagcattg cctttaaatt ttttttcaaa ttttttactg
     5281 atttctttaa tcaaaaaaat ttctctttgg ctgtctagaa tcataatctg ttctactaaa
     5341 gataaaatac gcttggggga ttcgtaaata atacttggat aaggaaagtt taaaattttt
     5401 tctatatctt tttgtctttc tttgccttta tttgctaaaa aaccaataaa gataaattct
     5461 ttttgacaaa atgctgagct tacaagagca actaaggctg catttgcacc tggtaaaatt
     5521 tcataggtga tattattttc ttgtgcaaat tctaccaaag ccttgccagg atcactaatc
     5581 cctggcattc ctgcatcgct taaataagct acattttttt caaatatctt taaatcaata
     5641 cttgctaaaa cttctttttc attatgggag tgtaaggcta taaatttaga aatatgtata
     5701 tcagtgtgaa atttggtatt taataacgaa atcaaagact tacttactct tgtatcttcg
     5761 caaaacacaa gatcgcaagt ctttaaaagt tctaaggctc taaaagaaat atcgcttaaa
     5821 tttcctatgg gagtaggaat aaaataaagc ataattattg cattgcgtat tttttcttaa
     5881 atttctctac acgacctgca gcatctacaa ttttttcact gcctgtaaaa aaaggatggc
     5941 aatttgaaca aatatctact cttaattctg ctttgtttga ctttgttgta aaagtatttc
     6001 cacaagcaca acttactttg cattctacat attctgggtg aatttctttt ttcattagtt
     6061 ttccttaaaa attaaaacaa taagccgtga ttataaatta tttaacataa aaaagagatt
     6121 aatttaagaa aagttaaagc aaaatttttg aagctatagc tataatagct gtttgacttt
     6181 ttagaatatt agagctttta agagagattt tccggttaaa caataatctc tcatcattgt
     6241 taaatccacc ttcaggacct ataaaatata attctttttc atcgaaatga ctttgttgtt
     6301 ctccttgaaa atcaaccata attgcatttg gaaatttttg aacaaattct tgagtgcttt
     6361 ggtggataat taaatccatt ttagtatttc taccgcattg ttcacaagaa gaaataatga
     6421 ttttttcaaa tctttctaaa tcgattttaa aatttctttg tgaaaaattt gtaaaaacca
     6481 aatgtaactt ttttactcca agttcattta agaaaggtag agttttttct aaaattttaa
     6541 tatctataat ggctaaggct aagtttaatt cactttgttt tatattttgt gattttttgt
     6601 ttaaaaattt taaagtgcaa gaatttcttg ttaaatttgt gattgtatag ttgtaaagaa
     6661 aattatcttg taaatttcta agatttagct ccgaattttc ctttactctt cttactttta
     6721 aatggttaaa gttttcacct tgaagttgta taaactcttc tccagcttgc ttgttataca
     6781 aaaattgcat tttatagata tctttctatt aaaaaaggca aaaacaataa aaaaatttca
     6841 aaaggtaaaa tcaaacaact aatccatcta aaagtggcat attttctaaa tcttcttgct
     6901 tttttaaaac aaacaaagtg aaaaattgct aaggcaaaaa ttaagatcca agaaaaaatc
     6961 attacccaga tattgacatt catttgaaat tgtttcattg ctgataacaa acaacctgta
     7021 aaaataatca aagctaaaaa taaataataa attggtaaaa ataatcgtat tctgcgaata
     7081 aaaatgaatt cggttttaaa atttccttgt gttagtataa gataaaaaag cattaaaaaa
     7141 ccgctcgcat aaagactata aagatgtaaa gctaaaaaga attcgtaact ttgatccatt
     7201 attttccttt gtttataaaa tcagctaaat tttgaatttg ttcatcactt aaaaaactat
     7261 ggtttttatc ttttatcgtt tttatttttt gtataaaaat tttattgctc aaggttttaa
     7321 tggccgtgct gtttttaggt tttaattccc ctttttctcc atgacaagtg gcgcattttt
     7381 gtttatataa agagttgata atactaggat tgacttcatg ttcatcatct gaactttgtg
     7441 cttcatcatc tacaggtaaa ggcaggttgg agtcacttaa ttctgttttt tcatcgtttt
     7501 gttctatttg gactacttct tgatctgtat tttgagtctt ggaaatattt ttttcatcat
     7561 tagaacaggc agataaaact aataaaaaaa aacttaaggc aattaaaatt ttagcttttt
     7621 gcattaaatc tcctttggat ttataaaaat ttcttcattt tttaatttgt tataaaaatc
     7681 tatatcattc cattctgctt taatgccatt ggaaaattct atgtcttgaa gtgaaatttt
     7741 tggcattagc tcactatagg catcttctct aaaaccttgt gcatagcctg ttcttgtttc
     7801 atgaacaatg atgctttgta aagtcactcc ttgttctcca tttaccattt tcgtttgttt
     7861 taataaagca tctataagta tgaaaaatac acgacaaaaa ttttcagcac ttacattaac
     7921 aggcaggcaa atccaacgac ttgaatattt tttcatttct tctaaatatt ttgcgtcatc
     7981 atatttaaaa agagtgatag catgatcaaa actatcaata atttggcgta tataggtttt
     8041 taaaagtcca aaatcataga ccattccagc attatctaaa tatttgcttt caagtaaaac
     8101 ttcaactttg taagaatgtc catgaatgct acttttgcaa cgcttagaag aacaaaatct
     8161 aacaatgtgt gcgttttcaa attcaaataa ttttcttata atcatacacc ctctttatcg
     8221 ttccaaagac gaatatgaat tctatcagaa taattataac cattcttaat acaaaattca
     8281 gcaatttttt gagcattttt tttaaggttt tgctcatttt cacccatagg catacaaaaa
     8341 atttgatttg gagcttcttt tagaatttca ttgatttcta aaaatgaatt atcaagagta
     8401 ttggcatcta aaacaaattt ataaaaacta tcttttgcgt aatttttaaa tgcttttaaa
     8461 gctttaaaat ttaatcgttt atcttttttt atcccactat tttggagttt aacgcttaaa
     8521 gcaaaaatac attctttgta aaaaggatat ctatcaaaat caatttctat gcttccattg
     8581 ctttcaaagt gtatttcgaa tttatttttt aataacattt ggataaattc tataaattca
     8641 ggattttcat aatggattaa tggttctcca cctgtgataa caactatagg attaaggtct
     8701 tgttttaatt ttatcactct ttttaaaagt tcattagcat ttaaagtttc ataactttct
     8761 ttaaaatctt ttgtgaaaac agctcttatc gtgtcacatc caatgagagt tttatcgttt
     8821 tttgatattt ttacattaaa acctaaacag ttgaaattac aaccagcaaa acgcataaaa
     8881 atagctaatt ttccattata tttaccttct ccttgaatgc ttaagaaact ttcaacaagt
     8941 tgcaaaatta acctccagtt tgataaaaag cacgagatga ggtttcatta tcaacaacac
     9001 tccatttatt tttttctggt ttatttctta atacttcttg taatatttct acagcggctt
     9061 taatatcacc ttttcgaacc gcttctttta tgcttaatgc ttcatcaaaa taaagacaag
     9121 gtattaacaa gccttcagca cttaagcgta tgcgattgca agaatcgcaa aattcatggc
     9181 tatgaggatc tataattcca aattcataat catctgcctt gtaaatactc acaggtgctt
     9241 tttcatcttt ttttataagt tgaatttgat atttttgact caaaatttgt ataatttcat
     9301 ctctttttaa tccttgtaat ttaccataag catgagtatt ttccataaat tctataaagc
     9361 gaatttgagc tttttttgat tttgcaaatt ccaaaagaga tatcagttca tcatcgttta
     9421 aatttttaag agctacagta ttaagtttta ctttcaaatc tagatttaaa acttcatcaa
     9481 ttccagataa aacactatct aatatatctt tttgcgcaag agtttttgct tttttgtgat
     9541 ctagggtatc aagtgaaata ttaagtcgtt taagtccagc attttttagg tctttagcaa
     9601 agtcttttag taaaaatcca tttgtagtta tagcaaggtc aatatcgctt ttataatcgt
     9661 taatcatttt tataaaaata cttaaatctt ttcttaataa aggttcccca cctgttatac
     9721 ggattttttc aattccttcg tctatagctg ctttaacaaa taaaaaaagt tcttcgaagc
     9781 ttaataaatt ttcttttggc tgataatcga aaggaatttt tggcatacaa taaaggcagc
     9841 gaaagttaca tctttgtgta actgaaattc taagataatt tatctttcta ccgaattgat
     9901 ctataagcat ttattttcca ttctatttta ttaatttctt aaattttaag acaagttcta
     9961 catttccagt gccaatgcgt aaatctttag cgatttgttc tatgcttttt ccttctttga
    10021 aaagattttc tattttttgt tcttctgtat cgtaatttgg tgtaagttta gccatgcttt
    10081 gtgctttttg ttccaaattt aaaagacgat tttgttgttc attttgaaaa tcttctatga
    10141 tatgttccat agtttttagt gttcttaaaa caggagtgat ttttgaactg atttgtttat
    10201 caagttcaat cataatttct tcttttaaaa gagaggtttt atagtcttca tcctcttcgc
    10261 tatcatcttt aactcctaat tctttacgaa aataatgaag ttctttggta atatcttcta
    10321 tcacattttg aagttttgct atttttgcat tattttctct ttctttgata ttcatgtagg
    10381 ctagcattgc aattaaaagc acaattataa aaactaaata aagtacatca tcactcattc
    10441 ttggcctttc ttatttctta tcatatttct ttggatttca acaacaaaag catcaaaagc
    10501 cattttgtct tcaggcttaa ttttgataat ttttgccaat gtttgacttt gagctttgat
    10561 aaaaatagct attttttgat tatttaaatc aaatcttaaa taatattctt tatcttcttc
    10621 taaaatagta tccaaaaaat ttagatactc aaaatttaaa gattctatta cccctttttg
    10681 cttaagtggt ataagttctt tatttttatc taaagaattt tcaagcctta aaatatcttc
    10741 ttttagactt aaaagaagat caaaaataat tttttcaccc tcgtcaaaat caatgcgtaa
    10801 agcaagtttt ttccatttta aaatttgaga aattgctcca agttttaggt attctccaag
    10861 aaaacggtta ttttctattt cacaacattc taaatgagct tcaaatcctg ctttaaaaag
    10921 tgctaattcc ataataaatc aatccaaata aaaataaaaa agataatact taaataacca
    10981 tttagagtaa aaaatgctct atcaatatga gcaaaattct tgtgaacaat tttatgttcc
    11041 aaggctaaaa taataccgct tataattacc ccaataagtg ctatttttcc aagtgctaca
    11101 ccccaaactt cccacacaaa aagaagccaa aataataccg ctaaaatatg gcaaaaagct
    11161 gatataaata aagtagcctt tgaaccaaat ttagcaggaa tagagtgaag tcctattttt
    11221 ttatcatact ccatatcttg taaagaataa agcagatcaa acccagctgt ccaaaaagtt
    11281 acacctaaac ataaaataac gctataaatg tgaatttcac ccataattat aacacttcct
    11341 gcaataggcg caagtcctaa acaaaatcct aaaactaaat gtgctaaaga actaaagcgc
    11401 ttaaaagctg aataaatagc caataccaaa agcacaggaa aagacaaata aaaggccaaa
    11461 gtattaataa aataagaaca tgatataaaa ataagtgcat taataatgat aaaaatccat
    11521 acgctttttc tacctatttt tccactgaca ttagggcgat ttgcacaacg aggattatcc
    11581 ttatctatat cttcatccat taaacgattt gtagccatgg caaaatttct tgcacttacc
    11641 gcacaaataa tgcctaaaat caacgcctta aaaccaaacc aagcagtgtc atttgcaagt
    11701 tttgatgcta caatcataga ggaaaataaa aaaggcaaag caaaaataga atgcttaaat
    11761 actacaagtt ctaaaatatc tttaaatttt atccagaatg tgttcatttt tctactttaa
    11821 aatatttttt gctatgattt tactaaaatt tttataaatt ttaggataaa tattaaaatg
    11881 ttttttgaaa tagcattaat aggaacaacc gcgagtggaa aaacatacat agccaatact
    11941 ttagcaagag aatttaatgc tgttgtttta agtcttgata gtctttgtgt ttataaagag
    12001 attaatatag caagtgccaa gccttcacaa gatgatcttg cgagtataaa atactttggg
    12061 gtaaatttat tgagcgtgaa tgaacatttt aatgttgagt tattcataag agaatatcaa
    12121 aaagcaaaag aatttgcttt agctagaaat ttacctctaa ttatagtagg tggaactgga
    12181 ttttatttaa aaactatgat agatggttta agtgaaaaaa ccttagagtc aaagagttct
    12241 ttaaataacg atgaaattta tgctctttta ttaaatattg atccaaacta taaaatagaa
    12301 aaaaatgata cttatagatt aaaaaaatgg ctgggtattt atgaacaaac aagagaaatt
    12361 cctagtgaat ttttaaaaag aacacaaaaa actggggtgc ttaaagatat agaaatttat
    12421 gagcttgcgt gggataaaga aattttaaaa aaacgtattc aaactagaac aaaagaaatg
    12481 cttgataatg gacttttaga tgaagcaaaa attctttttt ctaaatttga ttataaactt
    12541 aaagcattaa attctatagg tttgaaagag tgtaaagaat atttagatgg agaaatttcc
    12601 tttaaagagc ttgaaaattt aatcacgata catactacac aacttgccaa aagacaaaga
    12661 acttttaata aaaaatttca aagtaaagcc ttggaatttg ataaagcttt agctacttta
    12721 agaatgaaat tttcaatcga aaaataaatg ttctattaga atttttactc ctagtataat
    12781 taaaaccaat ccgcctaaaa gttcagcttt atttttaaga taaattccaa atttattccc
    12841 tatttttaga gcaatgatac ataaaatgaa ggtgataata cctattaaaa atatagctaa
    12901 taatagattt atatttaaaa atgcaaaact cacaccaact gctagtgcat cgatactcgt
    12961 agcaattgct aaagctagca tggttttaaa gccaaattga ttggcattac tatcgcaatt
    13021 ttcattttcc aatgactctt tgatcatttt taatcctatt aaagaaagta aaataaaagc
    13081 tatccaatga tcaatactcg caataaaaga tgcaaaagtt atgcctataa aataaccaat
    13141 agttggcatc aaagcttgaa atccgccaaa ataaattcca acaataagat aatgttttaa
    13201 atgtagtttt ttaacactaa aacctttgca tagtgataca gcaaaagcat ccattcctaa
    13261 agcacaggat aaaaaaataa gactataaaa atccataata aatcctaaaa ttttataaaa
    13321 aattgaagat gaaattataa ttaaacaaag ataaaaatca cataattttg atatatttaa
    13381 ttaaatttta agaaataaat atatataatt caatttcatt tttatttttt actccttaaa
    13441 agtggcccat tcgtctagcg gttaggacat cgccctttca cggcggtaac acgagttcga
    13501 gtctcgtatg ggtcaccact ttttaatttt tcttttaaaa taacaatttt ttcatttttt
    13561 ctattgaaat ttaataaata ttaataattt attttgtaga atacgaatag cttttgatat
    13621 aagtctatta tagacttata tcaaggctgg gcattattga gctggtgttt gctcttttgt
    13681 ttttttgtga gttttagctt catgtttttt atcagcttta gcttttgaat gatgagcttt
    13741 tgtatgtgtt tgatttacat cgcttggagt atcagctgca aaaacattag ctgcgaaagc
    13801 acctagtaat gctgagatta gtacaacttt tttcatattt tcctccttat gaataatttt
    13861 tagttgcaaa ttaattgtaa ttatta
//
LOCUS       DARATF010000044        13407 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.044, whole genome shotgun sequence.
ACCESSION   DARATF010000044 DARATF010000000
VERSION     DARATF010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13407
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.044"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1395
                     /gene="murJ"
                     /locus_tag="SB502_001021"
     CDS             <1..1395
                     /gene="murJ"
                     /locus_tag="SB502_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEG0434472.1"
                     /translation="RILGLARDVLIALFLGAGLYSDIFFVALKMPAFFRRIFAEGAFG
                     QSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFSSFFTKLFAFGFNADTIALA
                     APLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAALFNLSIVIAAFFVDKNAPQN
                     TLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMALSIKFKKAKAKLQGFYGNFFHGVL
                     GSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLALFAIALTQVSFPKILKHLK
                     SDQENLALKFMQRALALLSILLIASSIVGSVFALEISKLLFERGNFTHEDSVITAYVL
                     IAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLIISALCSMAFIFLIKDESLKV
                     IAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLVIVALIIFTILLILVKPYIL
                     SFFIGIFTSFKGVF"
     gene            1395..2783
                     /locus_tag="SB502_001022"
     CDS             1395..2783
                     /locus_tag="SB502_001022"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEG0434473.1"
                     /translation="MRLLDSVTKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLAQGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLLDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKS
                     EIAKQILEILNDDLNVSKALALLDDFINNANLELDKESKNKILKQNIKEALSELAKIF
                     GFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKSKDFNTADTIREQLSSKKITLLD
                     TPNGTIWEKINA"
     gene            2776..4518
                     /locus_tag="SB502_001023"
     CDS             2776..4518
                     /locus_tag="SB502_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434474.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFSKHNDILCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            4550..5608
                     /locus_tag="SB502_001024"
     CDS             4550..5608
                     /locus_tag="SB502_001024"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEG0434475.1"
                     /translation="MAYEMIKPLLFKLNPEYTHALVECSLRALSASFPGALSFLAHKY
                     IVDNESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VAKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            5605..6855
                     /locus_tag="SB502_001025"
     CDS             5605..6855
                     /locus_tag="SB502_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEG0434476.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTKTM
                     PKIHTKEPKQDGAKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSFNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            6848..7744
                     /locus_tag="SB502_001026"
     CDS             6848..7744
                     /locus_tag="SB502_001026"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEG0434477.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKETKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     STLTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYLAGLIESLEFRLPLC
                     SPSKENFAKIEEVMKKYKIKGF"
     gene            7744..8523
                     /locus_tag="SB502_001027"
     CDS             7744..8523
                     /locus_tag="SB502_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HEG0434478.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(8564..8869)
                     /locus_tag="SB502_001028"
     CDS             complement(8564..8869)
                     /locus_tag="SB502_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434479.1"
                     /translation="MELDQILLYAFIFLNLFALFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFIGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(8881..9477)
                     /locus_tag="SB502_001029"
     CDS             complement(8881..9477)
                     /locus_tag="SB502_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0434480.1"
                     /translation="MQIIKQACGAYETNCYILFGEHGEIIIDPGFDALNFIKKHVKNP
                     LAILNTHGHYDHVWDNEKVKQAYQIPIYIHKNDTFMLEDPFNQGFMPSKADYLIDDEN
                     IISIGGLDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            9551..10291
                     /locus_tag="SB502_001030"
     CDS             9551..10291
                     /locus_tag="SB502_001030"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEG0434481.1"
                     /translation="MDWQKITEKMCDFIQEKVKNFQSQGVVLGLSGGIDSALVATLCK
                     RTLKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLLKT
                     LDSSLIAMLKNRMQKNAFKGKMPEILEI"
     gene            10295..11221
                     /locus_tag="SB502_001031"
     CDS             10295..11221
                     /locus_tag="SB502_001031"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEG0434482.1"
                     /translation="MSEEKNYELWLDNYFFKPNFWQKCLAFILLPLSVLYAFFAILNT
                     FFRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKN
                     QNEILCTLAQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFH
                     IKKFDILLESKIKPYFNFNLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAV
                     LVTAIAKSFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVK
                     DFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            11218..12630
                     /locus_tag="SB502_001032"
     CDS             11218..12630
                     /locus_tag="SB502_001032"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEG0434483.1"
                     /translation="MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEEFFKKALKSYESFDDKNTPISLQKIAEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNILSEFFNHGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNS
                     DEKVFEAKSIKKEILDWMQK"
     gene            12627..13346
                     /gene="kdsB"
                     /locus_tag="SB502_001033"
     CDS             12627..13346
                     /gene="kdsB"
                     /locus_tag="SB502_001033"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEG0434484.1"
                     /translation="MIIIPARLKSSRFHEKILCDVGGVPMFVATARRVSSVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKNHESGTDRINEACKKLSLKDDEIIINVQADEPFIECE
                     NLLKFKEFASSCLDKKAFMVSCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYERALKIYLEK"
BASE COUNT         4725 a         1580 c         2459 g         4643 t
ORIGIN      
        1 agaattttag ggcttgctag agatgtttta atagcgcttt ttttaggagc agggctttat
       61 agtgatattt tttttgtggc tttaaaaatg cctgcttttt ttagaagaat ttttgcagaa
      121 ggagcttttg gacaaagttt tttgcctaat tttgtaaaag cgaaaaaaaa aggagctttt
      181 tgcgttagtg taatgatgca atttagcctt atagtttttt tattttgtct tttggtaagt
      241 tttttctcct ctttttttac taagcttttt gcttttgggt ttaacgcaga tactatagct
      301 ttagcagctc ctttggtggc gattaatttt tggtatttgt tttttatttt tttagttact
      361 tttttaggag ctattttaaa ttatagacaa aaatttttca ttacctcttt ttctgcggca
      421 ttatttaact taagtattgt tatagctgcc ttttttgtgg ataaaaatgc accgcaaaat
      481 acactttatt atttttctta tgcaacggtt ttaagtgggg tagcacagct tattttacat
      541 ttgcttgttt taaaaaacaa tcctgtaatc cgtgctatgg ctttaagtat aaaatttaaa
      601 aaagctaagg cgaaattaca aggtttttat ggcaattttt ttcatggagt tttaggttct
      661 tctgcgactc aatttagctc attgcttgat acaaccatag ctagtttttt aatgagcggg
      721 agtatttctt atctttatta tgcaaatcgt gtcttccaac tcccccttgc gctttttgct
      781 atcgctttaa ctcaagtttc ttttccaaaa attttaaaac atttaaaaag tgatcaagaa
      841 aatttagcct taaaatttat gcaaagagca ttagcgcttt taagcatttt gcttattgct
      901 tctagtattg taggttctgt atttgctttg gaaatttcaa agcttttatt tgaaagagga
      961 aatttcactc acgaagatag tgtgattacg gcttatgttt tgattgctta tcttataggg
     1021 cttttacctt ttggtttgca aaagcttttt tctttgtggc tttatgcaaa atttaaacaa
     1081 aaaacagcag cttggatcgc ggtaaaatct ttaattatca gtgctttatg ttctatggct
     1141 tttatatttt tgattaaaga tgaaagttta aaggttattg cagtagcact ttcaagctct
     1201 attagtgctt tttatttgct tggagctaat atcaaagaat ttggttttaa gaaatttttt
     1261 gctttaatat ctattaaaat ttgcttattg gttatagttg ctttgattat ttttacaatc
     1321 ttacttattt tggttaaacc ttatatttta agttttttta taggaatttt tacaagtttt
     1381 aaaggagttt tttaatgaga ttattagaca gtgtaacaaa agagaaaata aaacttgata
     1441 aaaaagatat tagtatttat ttatgcgggc ctacggttta tgatgatgca catttaggac
     1501 atgcaagaag tagtgtttgt tttgatcttt tgcgtagggt tttacttgct cagggcaata
     1561 gggtaaaatt tgctagaaat tatacagata ttgatgataa gattttgaaa aaaatggctc
     1621 aaagtggtca aactttagag gaaattacgg aattttatat taaaagttat gaagaggata
     1681 tgagggtttt aaatgtatta gatcctgatt ttaaacctcg tgcaacgcat tatataacag
     1741 ctatgcttga tttgattaaa aagcttgcta aggatgggtt tgtttatact ctagaagatg
     1801 gaatttattt tgatacaagt aaagatgaaa aatatttaag cctatcaaat cgcaatttag
     1861 aagaaaatat ctctcgtcta agtaatgaag tgcaaaaaag aaatgaaagc gattttgtgc
     1921 tttggaaatt tgatgaaaat ttttacgaaa atgaatttgg caaagggcgc ccaggttggc
     1981 atactgaatg tgttgctatg attgattcta tttttgaaaa tactcttgat atacatgctg
     2041 gagggataga tttgcttttt cctcatcatg aaaatgaagc tgcgcaatgt cgttgtggat
     2101 gtaagagaaa attagcaaat atttggcttc ataatggttt tgtaaaaatc gatggcgaaa
     2161 aaatgagtaa aagtttaaat aatagttttt tcataaaaga tgctttaaaa gaatttatgg
     2221 gcgaagcttt aagattttat cttttgagtt ctcattatag atctcatttt aattattctt
     2281 tattggattt agaaaatgct aaaaaacgtt tagataaatt ttatcgcctt aaaaaaagat
     2341 tggatttagg tgaaatttct gattttgatg ttttaaatga tattgaaata aaaagcgaaa
     2401 ttgctaagca aattttagag attttaaatg atgatttaaa cgtttctaaa gccttagctc
     2461 ttttagatga ttttataaat aatgcaaatt tagagttgga taaagaaagc aaaaataaaa
     2521 ttttaaaaca aaatatcaaa gaagctttaa gtgagctagc taaaattttt ggctttggtt
     2581 ttatggatac aactttatat tttcaatggg gtgtaagcaa agaagaacga gaagagattg
     2641 aaaagttaat tttagaaaga actgaggcta agaaaagcaa agattttaac acagctgata
     2701 caataaggga acaactaagt agtaaaaaaa tcactctttt agatactcca aatggaacaa
     2761 tttgggagaa aataaatgca taatgagatg aatttaaaag aggttttaat acgctttaag
     2821 cccttttata aaagatattg gaagcaattt gctatagcta tttttggtat gattttagca
     2881 agcggaggaa ctgctggaag tttttatgct ttagagccta ttttaaatta tattttcgtt
     2941 gaaaaaaatg aagctttact ttatacagtg ccttttttgc tagtattgat gtattttttt
     3001 aaaaatcttg gaacttatct acaaagtttt tatgtttcct ttataggaac agatatgtta
     3061 agagtattgc gtgctagggt tttaaaaaat gttttacgct tggatatgga tttttttaaa
     3121 cgctatagaa gcggagagct tgtaagtcgt tgtactaatg atattaatgc acttcaaagt
     3181 atagtatcaa atattattcc tgattttttt agagagcttt taactgctat aggactgctt
     3241 gcggtagtct tgtatcaaag tcctactttg gctttttttg ctttagtgat tttgccttta
     3301 gctatttttc ctttggtatg gtttgctaaa aaacttaaaa aatatgcaag aaatatacaa
     3361 gaaacaaatt cggatttact ttcttatttg ggtgaaattt tttcaaatat tgaattgatc
     3421 aaagctaatg ataatgaaaa aaaagaaagt gataaatttt ctaagcataa tgatatttta
     3481 tgtaaattaa acctaaaatc cgcacgtatt gatgcactta caagtccttt aatggatatg
     3541 atgggttctg ttggggttgc tgtggtgatt attgtagggg gtagagaggt tatcaatggt
     3601 tctatgagtg tgggaagttt tatcagtttt gtttcggcac tttttgcgat atatactcct
     3661 ttaaagcgtc tttcgtcttt atatggaaaa cttcaaggtg ctgttgcggc aagtgaaaga
     3721 actttttatt tattggattt agaacctcaa attaaaggtg gaagcaaaga attaaaaaac
     3781 attgaaaaaa ttagctttga aaatgttgaa tttgcttatg aaaacccgca taaaagtgtt
     3841 ttaaaaggcg taaattttga ttttgttaaa gggcaaatgc ttgctcttgt agggacaagt
     3901 gggggtggca aatcttctat tattaatctt ttgatgtatt tttatgaaaa gcaaaaaggt
     3961 aaaattttac tcaatcaaga agatattagc acttttacca tagaaagctt acatgctaaa
     4021 ataggacttg taacgcaaaa tatttatctt tttaatgata gttttgctgc aaatattgct
     4081 tatagcgaag agttagaaga agaaaaagtc atccaagctt taaaattggc caatgcctat
     4141 gaatttgtta aagaaatggg cgggatttgg gctgaagtga aagaacatgg taaaaactta
     4201 agtggaggac aaaaacaaag aatagcaatc gctagagctt tatataaaaa tcctgatgtg
     4261 cttatttttg atgaagcaac ttcagctttg gataatgaaa gtgaaaaagc aatagttaaa
     4321 actatagaaa atttaaaaca agacagattg attttagtgg ttgcacatcg tttaagcact
     4381 atagaaaatg cagataaaat agtagtattg gataagggta aggtattggc aataggtaaa
     4441 gatgaagagc ttttgcaaac ttgttctttg tatcaaaaat ttaaaagcaa agaaaaaaca
     4501 aagcctagct ttagttaatt ttagttagaa ttttaaaaag gattaaaaaa tggcttatga
     4561 aatgataaaa cctttacttt ttaagttaaa ccctgagtat acacatgctt tggttgaatg
     4621 tagcttaagg gctttaagtg ctagttttcc aggagcttta agttttttag cacacaaata
     4681 tatagttgat aatgagagtt taaggcaaaa tttacttgga cttgatttta ataaccctgt
     4741 gggtttagca ggaggctttg ataaaaatgc tactatgata agacctttga gtgctttagg
     4801 atttggcttt ttagaagtgg gaacttttac tccaaaacct caagaaggca atgaaaaacc
     4861 acgtctattt agacttgtaa aacaagaaag tatacaaaat gctatgggtt ttaacaacga
     4921 aggtgctgaa aagattgctt taagacttgc aaaaacttat ccttttgttt tacccttagg
     4981 agtaaatata gggaaaaata aaatcactcc aaatgataaa gccttggagg attattttac
     5041 tttgtttaga gattttaagg atttatgtga ttattttatc gttaatatct catctcctaa
     5101 tactaaaaat ttaagagagt tacaaaatga tgatttttta aataccttgc ttgaagaagc
     5161 caaaaaaatt acttctaagc ctattttgat aaaaattgct cctgatatga aaatagatga
     5221 tgctttaaat ttatgtgaaa atgctattaa aaaaggtgca gatgggttta tattagccaa
     5281 tactagtgtt gattatagct tactagataa taatcgtact tttggtggta ttagtggaag
     5341 gttgattaca gaaaaaagtg gtattttttt caaagaagta gctaaaattc tttttggcaa
     5401 aaccttgctt attgcaagtg gagggattga tagtgctgat attgcttatg agcgtattaa
     5461 aaatggggct aatttggtgc aagtttatac agctttgatt tttaaaggtc cttctttggt
     5521 aaaaaatatc aatcaaaatc ttatagagct tttaagaaaa gatggttttt tacacattag
     5581 cgaagctgtt ggggtaaatt taaaatgatt gcttatgaaa aaattcaatt aaaaaacaag
     5641 cttgaagttt atgctttgcc tgtaaataaa aatagcgatg tgattagcgt tgatattttt
     5701 tataaagtag gttcaagaaa tgagatcatg ggaaaaagcg gcatagctca tatgctagaa
     5761 catttaaatt ttaaaagtac taaaaattta aaagctggcg aatttgatga gattgttaag
     5821 ggttttggtg gtgtggataa tgcaagcaca ggttttgact atactcatta ttatattaaa
     5881 tgtgcgaaga aaaatttaga taaagctttg gaactttttg cagaacttat ggcgaattta
     5941 aatttaaaag atgaagaatt tcagcctgaa agagcagtgg ttttagaaga gcgtagatgg
     6001 agaacagata ataatccttt gggatatctt tattttagac tttttaatca tgcatttatg
     6061 tatcatcctt atcattggac tcctataggt ttttttaaag atatagaaaa ttggagtatt
     6121 gaagatatta aagaatttca cagtatttac tatcaaccta aaaatgcgat tttacttgta
     6181 agtggcgata tagaaagtaa agaagttttt gagctttcaa aaaaacattt tgaaaagatt
     6241 aaaaatacta agactatgcc taaaattcac acaaaagagc ctaagcaaga tggagcaaaa
     6301 agaatatatt tgcataaaaa ctcagatact gaactattag cccttgctta taaaattcca
     6361 aatttcaagc acaaagatat acctgcttta aatgctttat ccgagctttt aggaagtggg
     6421 aaaagttctt taatgagtga aattttgatt gataaattaa atttaatcaa tgattattat
     6481 gcttatgtta atgattgtat agatgaaaat ttatttattt ttatttgtaa ttgtaacccc
     6541 aatgttaatg cagaaaaagt agaaaaagag cttttaaaaa tcattgataa gcttaaaatg
     6601 ggtaaaattt ctcaaaaaga tttgcaaaga gtgaaaaata atgtcaaaag cgattttatt
     6661 ttctcattta acaatgctag tgcagtggca aatatttatg gttcatatct agcaagagga
     6721 gatatcaatc ctttgttaaa ttatgagaaa gatatacaaa atttggaatt aaaagatttg
     6781 atttcttgtg ctaaaaaata ttttattcaa gaaaattcaa ctacggtaat tctaagaaag
     6841 gattcaaatg gataaaaata ttattattgg ggcgatgacg gctcttatta caccatttaa
     6901 aaatggaaaa gttgatgagc aaagttatgc aagattgatt aaaagacaaa tagaaaatgg
     6961 catcgatgca gtagttccag taggaacaac aggagaaagt gcaactttaa cccatgaaga
     7021 acatagaact tgcatagaaa tagccgttga gacttgcaaa gaaactaaag ttaaggtttt
     7081 agcaggtgcg ggaagtaatg caactcatga ggcagtgggt ttggctaaat ttgctaaaga
     7141 gcatggtgct gatgggattt taagtgtggc accgtattat aataaaccta cacaacaagg
     7201 actttatgag cattataagg ctattgcaca aagtgtagat attcctgtgc ttttatataa
     7261 tgttccagga agaacaggtt gtgaaatttc aacggatact attatcaagc tttttagaga
     7321 ttgtgaaaat atttatggag taaaagaagc gagtggaaat atcgataagt gtgtggattt
     7381 gcttgcgcac gaacctagaa tgatgcttat ttcaggggaa gatgcgatca attatcctat
     7441 actttcgaat ggcggaaagg gagtgatttc agtaacttca aatttattac ccgatatgat
     7501 tagcacttta actcattttg ctttagatga aaattataaa gaagctaaaa aaatcaatga
     7561 tgagctttat aatatcaata aaattttatt ttgcgaaagt aatcctattc ctattaaaac
     7621 ggctatgtat ttagctggat tgatagaaag tttggaattt agacttcctc tttgttctcc
     7681 aagtaaggaa aattttgcta aaattgaaga agtgatgaaa aaatataaga tcaaaggatt
     7741 ttaatgaata cagaatttca aggaaaaact ttagtgatta gcggtggaac tcgcgggata
     7801 ggcaaagcta tagtttatga atttgctaaa gtgggtgcaa atatagcttt tacttataat
     7861 tctaatgcgc aaattgctga tgaaatggtt caagatttgg agaaaaatta taaaatcaaa
     7921 gctagagctt atgagtttaa tattttagaa cctgaaactt ataaagaact ttttgaaaaa
     7981 attgatgtgg attttgatag agtggattat tttatctcaa atgctatcat ttcaggacgt
     8041 gcggttgtag gtggctatac taaatttatg aagttaaaac caaagggaat taataacatt
     8101 tttacagcca cagtaaatgc ttttgttgtg ggcgcacaag aagcagctaa aaggatggaa
     8161 aaagtagggg gtggaagcat tatttctatc tcatctacag gaaatttagt gtatatagaa
     8221 aattattcag gtcatggtac agcaaaagcc gctgtagaag ctatggcaag atatgcggct
     8281 actgaacttg gagaaaaaaa tatccgtgta aatgtcgtaa gtggtgggcc tattgaaact
     8341 gatgctttaa gagcttttac aaattatgaa gaagtaaaac aggctactat aaatttaagc
     8401 cctttaaatc gcatggggca gcctgaagat ttggctggag catgtctttt tctttgctca
     8461 agtaaggcaa gttgggtgac aggacatact ttcatcgttg atggtggtac aacttttaaa
     8521 taaaaattaa gaaaaatcaa tggatttttc ttaaaaatat ttttcaatca agttttaatt
     8581 tccaccctaa aaaaacactt aataatgcaa gtaaaaaaat aaaatttaaa gtccaattac
     8641 caaaacctat aaaacctata gataatacgc tgtaaaaaaa tcctcctaca gctgaataaa
     8701 tacaaatcgt acttaaagat ccattttctg ccattttttt acatgggcag attttataaa
     8761 attttttatc attaaattga tttttctttt tatttcccaa aaataaacca aaaagggcaa
     8821 aaagatttaa aaaaataaaa gcatataata aaatttgatc taattccatt ttaatatacc
     8881 ttaaaaatat ctaagccaag agggtagatg gacttgctct tcttttaaag tagtttcttg
     8941 tccatgtcct ggcaaaagtt taaaatcttc tttgtaagtc ataacttttt ctaagctttg
     9001 tttcattaaa tttgcatctg aataaggaaa atcccatctt cctatgcttc tataaaataa
     9061 aaaatctcca ctaaacatga tatttttacc tacaatttct atcatagtgc aacctggtgt
     9121 atgtcctggt aaaaagtgaa atttaaagtc aagtccgcct atagaaatga tattttcatc
     9181 atcaatcaaa taatccgctt tgctaggcat aaaaccttga ttaaaaggat cttcaagcat
     9241 aaaagtatca tttttatgaa tataaatggg gatttgatag gcttgtttta ctttttcatt
     9301 atcccaaaca tgatcgtaat gtccgtgagt gtttaaaatc gctaaaggat tttttacatg
     9361 ttttttgata aaatttagcg catcaaaacc aggatcaatt ataatttctc catgctcacc
     9421 aaataaaata taacaatttg tctcataagc tccacaagct tgtttgataa tttgcatttt
     9481 ttacctcttt aataaaaaat ttgccttaaa taaatataat tatacattaa atttttaaaa
     9541 ggcaagcttt atggattggc aaaagattac ggaaaaaatg tgtgatttta tacaagaaaa
     9601 agtgaaaaat tttcaaagtc aaggtgtggt tttggggctt agtggtggga ttgattctgc
     9661 tttagtagca acgctttgca aaagaacttt aaaagagaat gtttttgctc ttttaatgcc
     9721 aactcaaatt tcaaataaag ccaatcttga agatgcttta aggctttgtg cggatttaaa
     9781 tcttgaatat aaaatcatag aaattcaaag cattttagat gcttttataa agcaaagtga
     9841 aaatactact ctagtatctt tgggaaattt tgcagcgcgt attagaatga gtttgcttta
     9901 tgattattct gccttgaaaa attctttagt cataggcact tctaataaaa gcgaattact
     9961 tttgggttat ggtacgattt atggagattt agcttgtgct tttaatccta taggatcgct
    10021 ttataaaagt gaaatttatg ccttagcaaa ataccttaac ttgcatgaaa attttatcaa
    10081 aaaagctcca agtgcggatc tttgggaaaa tcaaagcgat gaagcggatt tgggtttttc
    10141 ttatgcaaaa atcgatgaag gtttaaaagc cttagaaact aatgatgaaa agcttttaaa
    10201 aacactggat tcttctttga ttgccatgct aaaaaatcgc atgcaaaaaa atgcttttaa
    10261 gggaaaaatg cctgaaattt tggaaattta aacaatgagt gaagaaaaaa attatgaact
    10321 ttggcttgat aattattttt ttaagcccaa tttttggcaa aaatgccttg cttttatact
    10381 tttaccttta agtgtgcttt atgctttttt tgcgatttta aatacttttt ttcgtaaaaa
    10441 aatagttttt aaaaaacctg ttattagcgt tggtaattta agttttggag gtaatggaaa
    10501 aaccccgctt tgcaaagcta tagcaaggga atttgatggc gtttttatag tgcttagggg
    10561 ctataaaaga aaatctaaag gtttgtttgt tgttaaaaat caaaatgaaa ttttatgcac
    10621 cttagcacaa agtggcgatg aagctatgga gtatgctttt gaagaaaata tcaaaggtgt
    10681 gattgtgagc gaagatagag taaaaggtat tgaaaaagct tttgagttgg gagctaaaat
    10741 cgttgtactt gatgatgctt tttctaaatt tcatattaaa aaatttgata ttttacttga
    10801 aagtaaaatc aaaccttatt ttaattttaa tttgccaagt ggggcttatc gtttgccaaa
    10861 attttatgaa aaaagggctg attttattgc attagaaggc agggattttg tgcgttattc
    10921 ttttgtaaaa gaaaatccaa aggctgtttt ggtaactgct attgctaaat cttttagatt
    10981 gtatgagcat tttatcaaag caagggcttg ttattttttt aaagatcatt atgagtttaa
    11041 aaaagaagaa ctagaaaatt tgctaaaaaa acataattgc gatacactaa tgcttacttt
    11101 taaggatttt gttaaagtta aagattttgg ttttaaatgt caaattatag aattaaatat
    11161 agaattaaaa gattcgttaa gagaaaaaat aaaaacttat atcaaggagt ttgaacagtg
    11221 aaattggtcg agagtagaaa tgtaaataat gtatcaagtt ttaaggaagc tttgattaac
    11281 ccaaacgctc cagaaggagg gctttactca cctttaaatt tacctatttt tgaaggagaa
    11341 aaatatgcca atttgtctta taaagatttt gctttaaagc ttatagaaag ttttggtttt
    11401 ggcgaagaag agttttttaa aaaggctttg aaaagttacg aaagctttga tgataaaaat
    11461 acgcctattt ctttgcaaaa aatcgctgaa aaaacctata ttaacgagct ttggcatggg
    11521 cctacaagag cttttaaaga tatggcttta cagccttttg gcgtgctttt aagcgaattt
    11581 tcaaaggata aaaatatttt aattatctgt gctacaagtg gcgatacagg acctgcaacc
    11641 ctaaaaagct ttgaaaatgc aaaaaatgtt aaagtagctt gtatgtatcc aaaaggtggc
    11701 acaagtggag ttcaagagtt gcaaatgcga gctttagata aggataattt gaaagttttt
    11761 gccatagatg aggattttga cgcagcgcaa cgcactttaa aagaattgct tttttcaaaa
    11821 gattttcaaa acgaaattaa agctttaaat tatgagcttt gcgcagctaa ttctgtaaat
    11881 tttgggcgta ttttatttca gattatttat cattattatg cgagtttaaa actttttaat
    11941 gagtttttag aagaagtgca aattatcgtt ccaagtggaa attttggcaa tgctttaggg
    12001 gctttttatg ctaaaaaaat gggagctaaa atttcaaaaa tcaaaatcgc ttcaaatgcg
    12061 aataatattt tgagtgaatt ttttaatcat ggcgtttatg atttgcgtga aaaaagtctt
    12121 aagaagacta tttctccagc tatggatata cttatttcat ctaatatcga aagacttttg
    12181 tttgcgaaat ttaaagataa aagaaccaaa gaactgatga atttgttgaa aaatgagaga
    12241 tattttaaac ttgaaaaaga agaattgcaa agtttacaag aagattttga ggcggatttt
    12301 tgcaccgatg aagaatgtat gcaatttatc aaacaaagca agattttaat cgatccgcac
    12361 accgcaactt gttttaaaat gcttgatcct ttaaaaccta gtattattac ctctacagca
    12421 gaatggacaa aatttactcc aagtatgata aaagctttat acgataggga ttctaagaat
    12481 gaaaaagaag atttaaaatt tatagctaaa gagtttaatg tccaagttaa agatgaaatt
    12541 ttggctttat ttgacttgaa aaatagcgat gaaaaggtat ttgaagccaa aagtataaaa
    12601 aaagaaattt tagattggat gcaaaaatga ttattattcc tgcaagatta aaatcaagtc
    12661 gttttcatga gaaaatttta tgtgatgtag gtggagtgcc tatgtttgtg gctactgcaa
    12721 gaagggtaag tagtgtggat gaagtttgta tagctttaga tgatgaaaag gttttaagta
    12781 tcgctaaaga atatggttta aatgcagttt taacaagcaa aaatcatgaa agcggtacgg
    12841 ataggattaa tgaagcttgt aagaaactat ctttaaaaga tgatgagatt attatcaatg
    12901 tccaagctga tgagcctttt atagaatgtg aaaatttatt aaaatttaaa gaatttgcaa
    12961 gttcttgctt ggataaaaaa gcttttatgg tgagttgtta taaaaaaatc acccaagaag
    13021 aagctatgga tcctaatctg gttaaagtgc tttgcgataa agaagggtat gccttgtatt
    13081 tttcaagagc taaaatccct tatgaaagag aaaattacga ggaaagtttt aaagggcatt
    13141 taggtattta cgcttatagt gtcaaagctt taagggagtt ttgttcttta tcaagttctg
    13201 cacttgaaag agcggaaaaa ttagagcagt taagagctat agaaaatggt aaaaaaatca
    13261 aaatgcttga aatatcaaca acaagcatgg ggattgatac taaagaagac tatgaaaggg
    13321 ctttaaaaat ttatttagaa aaataactcc accccaaaac gaaacagatt ttgcttatat
    13381 tattttaata tatttagatt gaaggca
//
LOCUS       DARATF010000045        13108 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.045, whole genome shotgun sequence.
ACCESSION   DARATF010000045 DARATF010000000
VERSION     DARATF010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13108
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.045"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1963)
                     /locus_tag="SB502_001034"
     CDS             complement(<1..1963)
                     /locus_tag="SB502_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEG0434485.1"
                     /translation="MLNGCYFYVNNFIQIFYKKKFYGWGRKRTGRYAFLFHKKFGGSL
                     ILFEDGFIRSLNLGVENSPSFSIVKDDIGIYYDATMPSKLENLLNTYEFKDEEIKQAK
                     KAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLEFGFAKDFKTVDMI
                     KDAIKENPKSKIYIKIHPDVLSGKKQSDLDINSLSKECILITENFNPIALLEFFDKVY
                     TKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYA
                     EYFNPYLNQKSNIFDTIQTLAKYKDIEKANSNRLFFFGFSKWKRKFVKPFFIAKNNEI
                     IFLDFLDCLKNIQLKENDKFFIWGKRIDYNALKTTLIKKAQDEDLLHFTPKISLVEDG
                     FIRSISLGSDLTRPFSLIIDDKGLYIDPNKASKLEELLQNEIFDENMLNRAKNIIKIL
                     LENRFSKYNGLKHENLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRSK
                     NQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTS
                     GFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELVAGALIAYPRYINPK
                     TKTLCEIEVCLDIMLNLQKAYFSKKYIKLA"
     gene            complement(1957..2967)
                     /locus_tag="SB502_001035"
     CDS             complement(1957..2967)
                     /locus_tag="SB502_001035"
                     /inference="COORDINATES: protein motif:HMM:NF024914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEG0434486.1"
                     /translation="MNNVLKIALIADELTYASLKEEDGVVLRNVTPINYKVLFYFWKP
                     DFLFVESAWHGCKNKWKYQIASYPDYPKRNNKKLQKCVDFAKTLNIPTVFWNKEDHVH
                     FDRFIESAKLFDFIFTVDENCISKYKSYVGENSFVGVLPFAVQSKFHNFTGFNFTLNK
                     ANFVGSYSRHIHEKRRFYQDMMFKLSSEINNLDVFDRNSNRKSTNYRYPIFKGMQIYP
                     SVEYKKTAQIYKKYLISLNVNTIENSPTMFSRRLIEIIACGGIAITNHTSAVEKYFKD
                     YCYSFQTEKELRNMLYKFQKNGLSEDDKIKLKNGAEFIAKNHTWKQRLEQIVDTIGIK
                     KC"
     gene            complement(3013..4083)
                     /locus_tag="SB502_001036"
     CDS             complement(3013..4083)
                     /locus_tag="SB502_001036"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434487.1"
                     /translation="MGFNKIILILYLRNTSDLLVSLSTQLIKTNYNSIPCFINPWEYD
                     RQYIFNNQWICQRYSEIFGKENLIVRLFDKNEFYQGDLLKDFIHTIGLKWDGRFVIPS
                     KQNESLDLIGIEFCKALNIKNNNYNFVELYDKYFTSKCLFLKFKPPKKIMQSYLDYFE
                     KSNEWVRKEFFPFKERLFQKQDLSNYKENYKLKEMKSEYWDKIAEFILDVVKTKDKII
                     EGKDIIIQSKIMQFNQIQTKLFFQVKYGTAKSRIQNQLSYKLGQTMIVNSKSFLGYLI
                     MPIALLSTVVSYRQYQKIYQEKIKKDFSLKLPSLKQYPDYQEAIKLKNHISYKLGEAL
                     IKAHKNWYGGGGISNFYLKYTS"
     gene            complement(4575..5267)
                     /locus_tag="SB502_001037"
     CDS             complement(4575..5267)
                     /locus_tag="SB502_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEG0434488.1"
                     /translation="MQAIILCGGLGTRLKSVIKDIPKPMAPINNKPFLEFIFEYLKKQ
                     GIKEVILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEVYVL
                     NGDTFFDIDLSKLKLNGSKICLALKQMNDFDRYGTVNVDGQGFVISFEEKIFKTQGLI
                     NGGIYLLTKDIFNEFDLEKKFSFEEFLQENYKKLKARAKIFDDYFIDIGIPQDYILFC
                     DKHEFYNLFFHV"
     gene            complement(5255..5860)
                     /gene="gmhA2"
                     /locus_tag="SB502_001038"
     CDS             complement(5255..5860)
                     /gene="gmhA2"
                     /locus_tag="SB502_001038"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEG0434489.1"
                     /translation="MENLNSYIKEHFQESILVKEQILKDENLITLIKNTSLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALSTDTSILTAISNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGASGGAMNELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ"
     gene            complement(5848..6867)
                     /gene="hddA"
                     /locus_tag="SB502_001039"
     CDS             complement(5848..6867)
                     /gene="hddA"
                     /locus_tag="SB502_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HEG0434490.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIEREDGKIIFDSPDTNSYSEYESKEFLENDGKLDIFKSIYNRIVKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAKILGKSWQSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKTLSKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            complement(6864..7895)
                     /locus_tag="SB502_001040"
     CDS             complement(6864..7895)
                     /locus_tag="SB502_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEG0434491.1"
                     /translation="MKKTALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIY
                     HLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQ
                     TNIIGTANILENIRILKAKDGYDPVVHVCSSSEVYGRAKVGIKLNEDTTFHGASPYSI
                     SKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVI
                     KVGNLSSVRTFQDARDAIRAYYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLS
                     FSTRKDIKIEQDEERLRPIDADYQMFDNTKIKSFINWKPEIAARKMFEDLLNHWRDEI
                     KKGRIPLNR"
     gene            complement(7892..9058)
                     /locus_tag="SB502_001041"
     CDS             complement(7892..9058)
                     /locus_tag="SB502_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002808681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEG0434492.1"
                     /translation="MKKYTLASSTWDEKELQAIQDVIKSDMFTMGKKVAEFEKDFAKF
                     TGSKYAVMTSSGSTANLIATAALFYTKNPKLKRGDEVIVPAVSWSTTYYPLYQYGLKL
                     KFVDIDLETLNYDLDALSSAISDKTKMIMVVNLLGNPNDFDTINDLIKGKDIILLEDN
                     CESMGAEYKGKQTGTFGIMGTFSTFFSHHMATMEGGFVVTDDDELYHILLCLRAHGWT
                     RNLPKENLVANKSDDWFSESFRFVLPGYNVRPVEMSGAIGIEQLKKLLMFLKHRRENA
                     KLFCEYFQNHPEFIMQKEIGSSSWFGFSLVIKPNSKLQRKDIIKKLEENDIEYRPIAT
                     GDFTQNEVIKYFDYEIHQELKNAKYIHEKGFFVGNHQFSISNQINLFKKVLDSL"
     gene            complement(9021..10115)
                     /locus_tag="SB502_001042"
     CDS             complement(9021..10115)
                     /locus_tag="SB502_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEG0434493.1"
                     /translation="MNKQSKIYVAGHTGLIGSTILKKLQQDGFCNIICKTHQELDLMN
                     QEAVKYFFEKEKPDCVFFCAAKVGGMLAQLNQRAEFLYNNLVMQSNVIHYSYLNGVKK
                     LIYLGSICIYPEEVQLPIKESSLLTGKLQYNNEPYAIAKIAGLKMCEFYSLQYGVDYI
                     SIMPVSIYGSNDNFDIQTAHVQAAIFRKIYLAKLLNECNYKELIDDLGVKTKEEAFMI
                     LKQNNINDKSVKLLGTGNSRREFLHCEDLAEASIYIMKNISFNEVVEREGWNQGNAHI
                     NIGTGEDISIKELAYMIKDILEYRGEVLFENKMENDGTARKVIDTNKIRALGWHYKIE
                     LRDGLVRMYHDYKKGVKQNEKIYTSFINLG"
     gene            complement(10120..10677)
                     /locus_tag="SB502_001043"
     CDS             complement(10120..10677)
                     /locus_tag="SB502_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002868501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEG0434494.1"
                     /translation="MAIEFDIQESKILKGVFIITPNSFKDLRGEIWSVFSSKDIESLL
                     PSNLKFVLDKFTLSKHNVLRGIHGDHKSWKLVTCVYGEVHQVVVDCRKDSPTYLKWER
                     FIINENNRKLILIPPYFGNAQYVSSKNDALYYYKWAYEGEYVDAKDQFTYAWNDSRIA
                     IDWSTDTPILSDRDIDATINDHIKG"
     gene            complement(10677..13043)
                     /locus_tag="SB502_001044"
     CDS             complement(10677..13043)
                     /locus_tag="SB502_001044"
                     /inference="COORDINATES: protein motif:HMM:NF019552.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002789578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEG0434495.1"
                     /translation="MTNKKLYFPIGDSIREPSVEFLSKIFFPNKKIMDINEILYPYSV
                     MNGSYSSESYFIYRNDSFGEYVHFACTCNWNSDAHKQNDELHFCLQLGDDIIFDDCGY
                     TDFLSINQYNELASEFSHSSITINNHNYIPKKKTNNKSKILSSRANLFGFKVVMQHSR
                     IKKCDICRIINFNSKSYILEINDEIVVENDLIGEIINFSFVLSPDINILYIGDKYILL
                     STKSNIRYIFRANSAFDIKVHNKYYAKEYPNLSFTNIIVFSSKISNNKNRYYFKLEKY
                     IYKEENMRYDSFMKLKHVVSSSNIKYYVIKPHNVGFTDTFLSACVVSSFLDSLGLVFK
                     GIVGVDKIDRSEYYQDLYQKINFKNTYNGSYYSIVDNNLDIDNIINEVKNLNKSIDTI
                     LLEFNYNHVLRLFELFPIFERKFFFSSFYGYFNNLTKAKITYDNKINITIHFRLGDEY
                     PLFVNQDTVVNPSMLLRSRFDFAYYNIKNKKGYRVIQQRFNALGEIELYIKKLRQFYK
                     DSVKINFISDGMDLGFNIVNREDIRNKLKKLGIKVDDEFLQRSTEQSIFKLNNLKKYC
                     DEFIVGESVDKFIQTKNLLLRSNIIVSSARLFCWGVLSAFKYDFTFKQVLFMNNSGSY
                     YDIIDNKNVKIEQYKNFNYCINNVFKYINHFLNKDIIDKIENHFNESAKIRIQNQLSY
                     KLGQAMIVSSKSILGYIRMPFVLSYIYDKYKQEQKIYQEKIKKDPSLKLPSLENYPDY
                     KEALTFKNHLSYKLGQALIKANKTWYKGGYIKMLFEIRELKQKAKKGK"
BASE COUNT         4437 a         2213 c         1421 g         5037 t
ORIGIN      
        1 ttgccaattt tatatatttt tttgaaaaat aagctttttg taaatttagc attatatcta
       61 aacaaacttc aatttcacat aaagtttttg ttttaggatt tatatatctt ggatatgcta
      121 tcaaagcacc tgctacaagc tcttctaggc ttagttttct tgttcttctt tcgcatctat
      181 atttatcttt tgttaaaccc cagcccgcat aaaaaggcat accataagta aaaacttttt
      241 tagctcttaa aagagcatca aaaccacttg tagaagtaat agtgtgaatt tcatcagcaa
      301 tttttatagc actatcgata ctgcaatctt ttacaatctc atcacaaaat tccaagatga
      361 gtgtttcatc ttttaaacct acacggttgc cacttaacac atcaggatga ggcttaaaga
      421 tgatataagc atcttgattt ttagaacgca cctccttaag caaatcaaga gtagataaac
      481 caaaaccccc taaaatcatc gaagcatcat cttcaacttg ggcggggatt aaaataatct
      541 tttgtcctat tttggcattg atctttaaat tttcatgctt taagccatta tattttgaaa
      601 agcggttctc aagtaagatt tttataatat tttttgccct atttagcata ttttcatcaa
      661 aaatttcatt ttgcaaaagc tcttctaatt tgcttgcttt atttggatct atgtaaagtc
      721 ctttatcatc aatgattaaa gaaaaaggac gcgtaagatc agaacctaaa gagattgagc
      781 gaataaatcc atcttcaact aaagaaattt tgggagtaaa atggagcaaa tcctcatctt
      841 gcgctttttt tataagagta gttttaagag cgttataatc tatcctttta ccccaaataa
      901 aaaatttatc attttctttt aattgtatat tctttaagca atctaagaaa tctagaaata
      961 tgatttcatt gtttttagct ataaaaaaag gttttacaaa tttccttttc cattttgaaa
     1021 atccaaagaa aaaaagtcta ttagaatttg ccttttctat atctttatat tttgctaaag
     1081 tttgaatagt atcaaaaata ttactttttt gatttaaata aggattaaaa tactcagcat
     1141 aaagtatata agcagcatag aaaacttctt ctaaacttct tttttgcatc cttcttttac
     1201 actctaattt atcttttgtt agaccccaac ctgcataaaa aggcatacca taacaaatac
     1261 actcacattc ttgcatcaaa gcttcaaaac ccatgccaga agttttggta taaaccttat
     1321 caaaaaactc aagcaaggct atgggattaa aattttcagt gattaaaata cattctttag
     1381 ataaggaatt tatatctaaa tcactttgtt ttttaccact taaaacatca ggatggattt
     1441 ttatataaat tttagattta ggattttctt ttatggcatc ttttatcata tcgacagttt
     1501 taaaatcttt agcaaaccca aattcaagcg aggcatcatt ggccgtttga gtgatgatta
     1561 aaacgcgttt ttcatctttt tgaaaataat catctgggat atcaagattg ttattatact
     1621 tgctaatttt atattttttg ataagctcta tagctttttt agcttgcttg atttcttcat
     1681 ctttaaattc ataagtattt aaaagatttt caagctttga aggcattgtt gcatcataat
     1741 aaatgcctat atcatcttta actatagaaa aacttgggct attttcaact cctaggttta
     1801 atgagcgaat aaatccatct tcaaataaaa tcaaagaacc accgaatttt ttatggaata
     1861 aaaatgcata tctaccggta cgctttctcc cccatccata aaattttttc ttataaaata
     1921 tttgaataaa attatttaca taaaaataac aaccatttaa cattttttaa tgcctatagt
     1981 atctacaatt tgctcgagtc tttgtttcca agtatgattt tttgcaataa attctgctcc
     2041 attttttaat ttgattttat catcttcact taaaccattt ttttgaaatt tgtacagcat
     2101 atttcgcaat tctttttctg tttgaaatga ataacaatag tctttaaaat atttttcaac
     2161 ggctgaagta tgattagtaa tagctatacc tccacaagct ataatctcta taagtcttct
     2221 tgaaaacata gtaggagaat tttcaatagt attaacattt aatgaaatta aatatttttt
     2281 atatatctgc gcagtttttt tatactctac tgaaggataa atttgcatac ctttaaatat
     2341 tggatatcta tagttagtag attttctatt tgaatttcta tcaaaaacat caagattatt
     2401 aatttcagaa gataatttaa acatcatatc ttgataaaat cttctttttt catgtatatg
     2461 tcttgaataa cttccaacaa aatttgcctt atttaaagta aaattaaatc cagtaaaatt
     2521 atgaaattta gactgaacag caaaaggcaa aacacccaca aaagaatttt ctcctacata
     2581 agacttatac tttgatatac agttttcatc aacggtaaaa ataaaatcaa ataattttgc
     2641 actttctata aatctatcaa aatgcacatg atcttcttta ttccaaaata ccgtcggaat
     2701 atttaatgtt ttggcaaaat ctacgcattt ttgtagtttt ttattatttc tttttggata
     2761 atcaggatat gaggcaattt gatacttcca tttatttttg caaccatgcc aagctgattc
     2821 aacaaacaaa aagtcaggtt tccaaaaata aaacaacact ttataattaa ttggggttac
     2881 atttcttaaa acaaccccat cttcttcttt taaagaagca taggttaact catctgctat
     2941 taaagctatt tttaatacat tattcacgca taacaccaaa atatttttta ataaaattat
     3001 actatttttt tctcaacttg tatatttcaa ataaaaattt gatatacccc ccccaccata
     3061 ccaattttta tgagctttta taagagcctc tcctaattta taagaaatat gatttttaag
     3121 cttaatagct tcttgataat caggatattg tttcaaagaa ggtaatttta gggaaaaatc
     3181 tttttttatt ttctcttgat aaattttctg atattgtctg tatgatacta ccgtacttaa
     3241 caatgctata ggcattatta aataacctag gaaagattta gaatttacta tcatagtttg
     3301 ccctagttta taagataatt gattttgaat tctagattta gcagtgccat atttaacttg
     3361 aaaaaataat ttagtttgaa tctggttgaa ttgcattatt ttagactgta taattatgtc
     3421 ttttccttct ataattttat ctttagtttt tactacatct aatataaatt cagctatttt
     3481 atcccaatac tctgacttca tttctttaag cttataattt tctttataat tacttaaatc
     3541 ctgcttttgg aataatcttt ctttaaaagg aaaaaattct tttcttaccc attcgtttga
     3601 tttttcaaaa taatcaagat aagattgcat tattttttta ggaggtttaa attttagaaa
     3661 caaacattta gaagtaaaat atttatcata caattccacg aaattataat tattattttt
     3721 aatatttaaa gctttacaaa attcaatacc tattaaatcc aaactttcat tttgttttga
     3781 aggtataaca aatctaccat cccactttaa ccctatagta tgtataaaat ctttcagtaa
     3841 atcaccttga taaaattcat ttttatcaaa aagtcttact attaaatttt ctttcccaaa
     3901 aatttcagaa tatctttggc aaatccattg attattaaaa atatattgtc tgtcatattc
     3961 ccaaggattt ataaagcatg gtatagaatt ataattcgtt tttattaact gagtagataa
     4021 agacactaaa agatcgctcg tatttcttag atataaaatt aaaataattt tattaaaacc
     4081 caattcttta aaaaatttct ttaaaatttt tatatattta atatcatgaa aatgccatgt
     4141 aattccttct gtagaaaata aaaaatctct tttggtttaa ataatttctt cctttaaagt
     4201 ataaaataat tttaatctag aacgatgttt caaaactaat attttcccaa ttcaaattat
     4261 ttttaaattc aaaacaaaaa ttaacaagaa cattatgtct agtatgagat tctattgaat
     4321 ttgcataaat tatattttga attttcaatt tttccttatt ttcactcaaa aatttctgta
     4381 tagttgttgt gcctgttttt ggggtttcta tatgaacata agcagtaatc tactctccta
     4441 atttcaattt caaatcttat aaaatcatat ctatatttat taaaattttc ttttattata
     4501 tacaatttaa accatgtata aaaggagata tagtcatttc ttatgttatg acttaaaaca
     4561 taaataatat cactttacac atgaaaaaat aaattataaa attcatgttt atcgcaaaac
     4621 aaaatataat cttgcggtat tccgatatct ataaaataat catcaaaaat tttagctctt
     4681 gcttttaatt ttttataatt ttcttgtaaa aactcttcaa aagaaaattt tttctctaaa
     4741 tcaaattcat taaaaatatc tttagttaaa agataaattc caccattaat taaaccctgt
     4801 gttttaaata ttttttcctc aaaggaaata acaaaacctt gcccatcaac atttaccgtg
     4861 ccatatctat caaaatcatt catttgtttt agagcgagac aaattttact tccatttagc
     4921 tttaatttac ttaaatctat gtcgaaaaaa gtatcgccat ttaaaacata aacttcattt
     4981 tttataaatt tcaaagcctc ttttatggct ccgcctgttc ctagaggttc tttttctata
     5041 ctgtatttta tttttatacc taaaaactca tctttaaaat attcttgtat cacctcatac
     5101 ttgtatgata ctgctaagat aacttctttt atgccttgct ttttaagata ctcaaaaata
     5161 aattctaaaa aaggcttatt atttatgggt gccataggct taggaatgtc ttttataacg
     5221 cttttaagcc ttgttcctaa gccaccacaa agtattattg cttgcaagaa aaacctttac
     5281 caaaaagctc ttcttcaacg atagcacaaa taatatgtcc tattaaaata tgtgcttctt
     5341 gaattcttgg cgtgcaagtt gaaggtactt ttatacaata atcacaaagc tcattcatag
     5401 ccccgccact agctccgctt aagcctatgc ttatgatttc tttttgtttg caaagctcta
     5461 aagcctttaa aatattttta ctatttccac ttgtagaaat tcctataaaa acatctccct
     5521 taactccttg agcttgcact tgtcttgcaa acaaattttc ataaccataa tcattgctga
     5581 tagcagttaa tatactcgtg tccgttgaaa gtgcaatact tgcgatccct ggtctatcaa
     5641 aataaaatct acttacaaat tcccctgcga tatgctgtgc atctgcagca ctgccaccat
     5701 ttcctgctaa taaagttttg ttaccatttt tataagcttt tatgacttct aatgaagtat
     5761 ttttaataag agttattaaa ttctcatctt ttaaaatttg ctcttttact aaaattgatt
     5821 cttgaaaatg ttcttttata tatgaattta aattctccat gatttaaccc cttcttttgt
     5881 aaatgaaaaa tcctgcacat aaccttgctc tttgcttaaa gttttgatta agttgtattt
     5941 tttagtagga tccacaaaga aaaacataaa cccacctgct cctgctccac tggttttgcc
     6001 actataagct ccattatcta tagctagttt ataaattctt tcaagctcat cattactaac
     6061 aatttcagaa atgatttttt ttgactgcca agattttcct aaaattttcg ccaaagtatc
     6121 aaaatccgcc ttaaacaaag cttctttcat ctttattgca tcttgcttta tggcgtgcat
     6181 agcttcgaga gatttttcat ctccaagttt tcctttttta tgttcttcta tatcttttgc
     6241 ttctcttgtg atatttgtaa aataaagcac aattctagtt tcaagctcac ttgcaatcca
     6301 gttttttata cgcaaaggat taacaatgac tcttttattg ttataaaatt ccataaaatt
     6361 aaagccgcca aaagttgcag cgtattgatc ttgtgctccg cctactatgc ctaaatcttc
     6421 tctttctatc tcataagcaa gcttagcgat ttcatattcc cctaaaggta aattaagcca
     6481 ttctgaaaaa gcttttataa cacctacaac taaggttgag cttccgccca agccactacc
     6541 acttggtaca tccgaataag tatgcaaaga aaaactcaaa ggtttttttg taaaatcttt
     6601 tacaatgcga ttgtaaatgc ttttaaaaat atctaatttt ccatcatttt ctaagaattc
     6661 tttgctttcg tactcagagt aagaatttgt atcaggcgaa tcaaaaatga tttttccatc
     6721 ttctctttcg atcaaagtac aatgtatgta taaagatata gtcgcattta aaacataacc
     6781 tgtgtattta tcacaatata aatttatatc agtccctcca cctgctaaac caaggcgaag
     6841 aggagtttgt gtgcgtatgg ttttcatcta tttaacggaa tccttccttt ttttatctca
     6901 tctctccaat gatttaacaa atcttcaaac atttttctag ctgcaatttc tggcttccag
     6961 ttaataaaac ttttgatttt tgtgttatca aacatttgat aatccgcatc aataggacgc
     7021 aatctttctt catcttgctc tatttttata tcctttcttg tagaaaaaga taaaagaatt
     7081 tctataacct ctgggagttt aaaagcctct tctcctgcta tattaaaagc ttccccacaa
     7141 ggaacttttc ctttttggct ttctaatgaa agtagataat aagcccttat agcatctctg
     7201 gcatcttgaa aggttcttac gcttgagaga tttccaacct tgataacagg ctcttgataa
     7261 cccgtttcaa tcaaagcaat ttgctttgca accgtgcttt caaaaaacac atcagaacgt
     7321 cttgggccac tatgtgttcc cattcttgta acaaaagtgc gaatgttata agcttcgcca
     7381 taaaatcttc ctaaataatc ggtgccgatt ttgcttatac tataaggact tgcaccgtga
     7441 aaagttgtat cttcgtttaa cttaatacct acctttgctc taccataaac ttcactagaa
     7501 gaacatacat gcactacagg gtcataacca tctttcgcct ttaaaattct aatattttct
     7561 aggatatttg ccgtacctat tatattagtc tgtaaagttt caatcggtat atcaaaagaa
     7621 gtttttggat aagactgagc tgctaggtga aaaatcacat caggtctttg actctcaaaa
     7681 agtttttgaa gactagagta atcatttaaa tctgcataaa aaatgcttat tctatctttt
     7741 ttattaatcc tatcacttaa atgatagata ttgtccatag gctcttgcca acgcatcatt
     7801 cctataactt cataatccgt atttgcaagc aaaaaatctg ccatttgaga accaacttgc
     7861 cctgtaaatc ctgtaattag tgctgttttt ttcataaact atccaatact tttttaaata
     7921 aattaatttg attactaata ctaaattggt gattacctac aaaaaatcct ttttcatgaa
     7981 tatattttgc attttttaat tcctgatgaa tttcatagtc aaaatactta attacctcat
     8041 tttgcgtaaa atctccagta gctataggac ggtattctat atcattttct tctagttttt
     8101 taataatatc ttttctttgt aatttagaat ttggtttaat taccaatgaa aatccaaacc
     8161 atgagctact tccaatttct ttttgcataa taaattcagg atgattttga aagtattcgc
     8221 agaataattt cgcgttttct ctacgatgtt ttaaaaacat aagtaatttt ttaagctgtt
     8281 ctataccaat agccccactc atttccactg gacgcacatt atatcctggc aacacaaaac
     8341 gaaatgactc actaaaccaa tcgtcgcttt tattggctac taaattttct tttggaagat
     8401 ttctagtcca accatgcgct cttaaacata gcaaaatatg atacagctca tcatcatccg
     8461 tgacaacaaa accaccttcc attgtggcca tatggtgaga aaagaaggtt gaaaaagttc
     8521 ccataatacc aaaagttcca gtttgctttc ccttatactc tgcccccatt gattcgcaat
     8581 tatcttctaa taaaataata tcttttcctt tgataagatc attaatcgta tcaaaatcat
     8641 taggatttcc taataaattt acaaccataa tcatttttgt tttatcgcta atagcactac
     8701 ttaaagcatc taagtcgtaa tttagtgttt ctaaatctat atctacaaat tttaatttca
     8761 agccatactg ataaagtgga taataagtag tactccatga taccgcagga actataactt
     8821 cgtctcctct ttttaattta ggattttttg tataaaacaa ggctgctgtt gctatcaaat
     8881 ttgcagttga ccctgagctt gtcataaccg catacttcga gcccgtaaat ttagcaaaat
     8941 ctttttcaaa ttcagctact tttttaccca tagtaaacat atcgctttta ataacatctt
     9001 gtatcgcttg taattctttt tcatcccaag ttgatgaagc tagtgtatat tttttcattt
     9061 tgttttactc cttttttata gtcatgatac attctcacca aaccatctct taattctatc
     9121 ttataatgcc atcctaatgc tctaatttta ttagtatcta taacttttct ggcagttcca
     9181 tcattttcca tcttattttc aaaaagcact tctcctctat actcaagaat atctttaatc
     9241 atataagcca attctttaat tgatatatcc tctcctgttc caatattaat atgagcatta
     9301 ccctgattcc atccttctcg ttcgacaact tcattaaaag atatattttt cataatataa
     9361 atactagctt ctgccaaatc ctcacaatgt aaaaattctc ttcgtgaatt accagtaccc
     9421 aataatttta cagatttatc attaatatta ttttgtttta aaatcataaa agcttcctcc
     9481 tttgttttaa ctcccaaatc atcaattaat tctttataat tacattcatt taacaatttt
     9541 gctaaataaa tttttctaaa aatggcagct tgcacatgtg ctgtttgtat atcaaaatta
     9601 tcattagagc cataaatact aacgggcata attgaaatat aatccacacc gtactgcaaa
     9661 ctataaaatt cacacatttt aagtcctgct attttagcaa tagcatatgg ctcattatta
     9721 tattgcaatt tcccagtaag taaactactt tccttgatag gtaattgcac ttcttcggga
     9781 taaatacaaa tgctccctaa gtatataagt tttttcactc catttaagta agaataatga
     9841 atcacattac tttgcataac aagattatta tataaaaatt ccgcacgttg atttaactga
     9901 gcaagcattc ctcctacttt tgccgcgcaa aaaaagacac aatcaggttt ttctttttca
     9961 aaaaaatatt ttacggcctc ttgattcatt aaatctaatt cttgatgagt tttgcaaata
    10021 atattacaaa aaccatcttg ttgcaatttt tttaaaattg tagatcctat taaacccgtg
    10081 tgacctgcaa catatatttt agattgctta ttcataattt tagcctttta tgtgatcatt
    10141 gattgttgca tcgatatctc tatctgataa tataggggta tctgttgacc aatctatagc
    10201 aattctacta tcattccatg catacgtgaa ctgatcttta gcatcaacgt attcaccttc
    10261 ataagcccat ttataataat ataaagcatc attttttgaa ctaacatatt gagcgtttcc
    10321 aaaatatggt ggtattaaaa tcaattttct attattttca ttaatgataa atctttccca
    10381 ctttagataa gtaggagagt cttttctaca atcaactacc acttgatgca cttcaccata
    10441 tacacaagtt actaatttcc aagacttatg atccccatgt atacctctta atacattatg
    10501 cttagataat gtaaatttat ctagcacaaa ttttaaattt gaaggtaata aactttctat
    10561 atctttgcta gaaaaaacag accaaatttc ccctcttaaa tctttaaaac tatttggcgt
    10621 tattataaaa acacctttta aaatttttga ttcttgtata tcaaattcta ttgccattat
    10681 ttcccttttt ttgctttctg ttttaattcc cgaatttcaa ataacatctt aatataccct
    10741 cccttatacc aagttttatt agcctttata agagcttgac ctagcttata agaaagatga
    10801 tttttaaatg ttaaagcttc cttataatca ggatagtttt ctaaagaagg taattttaaa
    10861 gaaggatctt ttttaatttt ttcttgataa attttttgct cttgtttgta tttatcatat
    10921 atatatgata acacaaaagg cattcttata tagcctaata tagatttaga gctaactatc
    10981 atagcttgac ctagtttata tgagagctga ttttgaatgc gaattttagc gctttcatta
    11041 aaatgatttt cgattttatc gataatatct ttatttaaaa aatgatttat atatttaaaa
    11101 acattattta tgcagtaatt aaaattttta tattgttcaa tttttacatt tttattatct
    11161 ataatatcat aataactgcc actattattc ataaataaaa cttgtttaaa cgtaaaatcg
    11221 tatttaaaag cagataaaac accccagcaa aataatcttg cagagctaac tattatatta
    11281 gatcttaata aaagattttt ggtttgtata aatttatcaa cactctctcc aactataaat
    11341 tcatcacaat atttttttaa attatttaat ttaaaaatgg attgctcggt acttctttgc
    11401 aaaaactcat catcaacttt tattcctaat ttctttaact tatttcttat atcttctcta
    11461 ttgacaatat taaatcctaa atccattcca tctgatataa aatttatttt aacactgtct
    11521 ttgtaaaatt gtcttaattt tttaatataa agttcaattt caccaagcgc attaaatctt
    11581 tgctgaatta ccctatagcc ttttttgttc ttaatattat aataagcaaa atcaaatcga
    11641 gatcgcaaaa gcatactagg attaacaaca gtatcttggt ttacaaataa tggatactca
    11701 tctcctaatc taaaatgtat tgtaatatta attttattat cataagtaat tttagctttt
    11761 gttaaattat taaaataacc ataaaaacta ctaaaaaaaa atttcctttc aaaaattggg
    11821 aataattcaa acagtctcaa cacatgatta taattaaact ctaaaagtat tgtatcaata
    11881 gatttattta aatttttaac ctcattgata atattatcaa tatctaagtt attatccaca
    11941 atagaataat agcttccatt atatgtattt ttaaagttta tcttttgata taaatcttga
    12001 taatattcgc ttctatcaat tttatctact ccaacaatac ccttaaaaac taaacccaaa
    12061 gaatctaaaa acgacgagac aacacaagca cttaaaaagg tatctgtaaa acctacatta
    12121 tgtggtttta ttacataata ttttatatta ctgctagata caacatgttt tagtttcata
    12181 aaactatcat aacgcatatt ttcctcctta taaatatatt tttcaagctt aaaataatat
    12241 ctatttttat tattggatat tttactagag aagacaatta tatttgtaaa agataaattt
    12301 ggatattctt tagcataata tttattatga actttgatat caaatgcact atttgctcgg
    12361 aatatatatc ttatattgct tttggtagac aataaaatat atttatctcc tatatataaa
    12421 atatttatat caggtgataa aacaaaacta aaattaatta tttcaccaat taaatcattc
    12481 tcaacaacta tttcgtcatt tatttcgaga atatatgatt tactgttaaa attaattatt
    12541 ctacaaatat cacatttttt tattctgcta tgttgcatta ccactttaaa tccaaataaa
    12601 tttgcccttg aactaagtat tttagactta ttattagttt ttttcttagg aatataattg
    12661 tgattattaa tagttatact agaatgacta aattcgctag ctaattcatt atattgattt
    12721 atagataaaa aatctgtata accacaatca tcaaaaataa tatcatcgcc caattgcaaa
    12781 caaaaatgta attcatcatt ttgtttatga gcatcagaat tccaattaca agtacatgca
    12841 aagtgcacat attctccaaa agaatcattc ctatatatga aataagattc acttgaataa
    12901 ctaccattca taacagaata cggatagaga atttcgttta tatccattat ttttttattt
    12961 ggaaaaaaga ttttagataa aaattcaaca gatggctctc ttatgctatc acctattgga
    13021 aaatataatt ttttattggt caacatgaat cctaaaaatt tcctgcttgt ttcttttaaa
    13081 agctttgatg ttattagttt tttgttaa
//
LOCUS       DARATF010000046        12947 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.046, whole genome shotgun sequence.
ACCESSION   DARATF010000046 DARATF010000000
VERSION     DARATF010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12947
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.046"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..267
                     /locus_tag="SB502_001045"
     CDS             <1..267
                     /locus_tag="SB502_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434496.1"
                     /translation="IMVLGNYFLKEQRNNALKSEQEQILLWMNNFNFLKDNNLSLIQK
                     EKDLFEKDLKDLREIFKKNAFEIGIWWFSKEKEDLEKRINESLK"
     gene            264..1025
                     /locus_tag="SB502_001046"
     CDS             264..1025
                     /locus_tag="SB502_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEG0434497.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVT
                     CDVSFISLINLLYYVDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKECAKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            991..1845
                     /locus_tag="SB502_001047"
     CDS             991..1845
                     /locus_tag="SB502_001047"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEG0434498.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKYLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGKDFLSFLKKEFTSLKFIVVGYDF
                     SFGKNRAYSAKDIEFLSGIKTIIVDEFSIGGIGVHASLIKDFLSRANLQKAKEFLGRN
                     YSIKGKVIKGQGLGSKELFATINLDCEGYFLPQNGVYATLLKSQRKTYKSVSFLGVRS
                     SDENFAIESHILEELGENFMQGEFFELEFISFLRENQKFQDLKKLKNQITKDIEQARE
                     LLRKNDER"
     gene            1832..2542
                     /gene="cmoA"
                     /locus_tag="SB502_001048"
     CDS             1832..2542
                     /gene="cmoA"
                     /locus_tag="SB502_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HEG0434499.1"
                     /translation="MMKDELFKQNPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGL
                     DISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(2532..2753)
                     /locus_tag="SB502_001049"
     CDS             complement(2532..2753)
                     /locus_tag="SB502_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEG0434500.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYKIGFPKDEWEDENISNP"
     gene            complement(2750..3196)
                     /locus_tag="SB502_001050"
     CDS             complement(2750..3196)
                     /locus_tag="SB502_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434501.1"
                     /translation="MRRLSILLAILIVINITACDSKTENYYKNLPSEAKEKAKEKAKE
                     CKESGTLSEDCINALKVGVKSTNEEGKYSPNTPKKSDNQILEALKQNDLKKEKTTKDI
                     NQSSENNESIIIPPIAETPSEIYPSKTTENNQSSIFSDDVNMTQEK"
     gene            complement(3254..3886)
                     /locus_tag="SB502_001051"
     CDS             complement(3254..3886)
                     /locus_tag="SB502_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEG0434502.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK"
     gene            complement(3897..4547)
                     /locus_tag="SB502_001052"
     CDS             complement(3897..4547)
                     /locus_tag="SB502_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEG0434503.1"
                     /translation="MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFEDDTNIPKKYRTTWSNYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
                     LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF"
     gene            complement(4544..5170)
                     /gene="nth"
                     /locus_tag="SB502_001053"
     CDS             complement(4544..5170)
                     /gene="nth"
                     /locus_tag="SB502_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEG0434504.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRTFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            5251..6072
                     /gene="peb4"
                     /locus_tag="SB502_001054"
     CDS             5251..6072
                     /gene="peb4"
                     /locus_tag="SB502_001054"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HEG0434505.1"
                     /translation="MKKFSLVAATLIAGVVLNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            6072..7136
                     /gene="fbaA"
                     /locus_tag="SB502_001055"
     CDS             6072..7136
                     /gene="fbaA"
                     /locus_tag="SB502_001055"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEG0434506.1"
                     /translation="MGVLDIVKAGVISGDELNKIYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMIKRLEIAFEDLNCINKN"
     gene            7231..8673
                     /locus_tag="SB502_001056"
     CDS             7231..8673
                     /locus_tag="SB502_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEG0434507.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKIERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            8670..9623
                     /locus_tag="SB502_001057"
     CDS             8670..9623
                     /locus_tag="SB502_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEG0434508.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            9610..10485
                     /locus_tag="SB502_001058"
     CDS             9610..10485
                     /locus_tag="SB502_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HEG0434509.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFVSYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYALALE
                     NGVDFVENIHSLSLKQFALSLCKKDDIFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFARPYKEFYELYMNLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKLV"
     gene            complement(10477..11820)
                     /locus_tag="SB502_001059"
     CDS             complement(10477..11820)
                     /locus_tag="SB502_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0434510.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENIIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFILLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(11871..12539)
                     /locus_tag="SB502_001060"
     CDS             complement(11871..12539)
                     /locus_tag="SB502_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEG0434511.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGVLDDQIAD
                     KIHHGGYHKAIFANSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDVHQIS
                     NAILQVSEPRKPCVKISRIHNNSNFTHEIFKTGLSGWYYKVLQVGQIRKHENIKILEK
                     NSTSLSVFELNQLFYSPHQILKQNPNLLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            complement(12536..>12947)
                     /locus_tag="SB502_001061"
     CDS             complement(12536..>12947)
                     /locus_tag="SB502_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HEG0434512.1"
                     /translation="LGGLFGAKNFLNPLNFNTISASKHALSYDYINNFEQLKQEIQTN
                     TKPIMLDFTASWCENCKLLDELTFSDERIIQKMQNYKLIKVDVSENNNEQIKTMKEFN
                     VFGPPVLIFFENGKEKLKITGFISADDLLKKIEP"
BASE COUNT         4689 a         1637 c         2175 g         4446 t
ORIGIN      
        1 atcatggttt taggaaatta ttttttaaaa gagcaaagaa ataatgcctt aaaatccgaa
       61 caagagcaaa tacttttatg gatgaataat tttaattttt taaaagataa taacttaagt
      121 ttaattcaaa aagaaaaaga tctttttgaa aaagatctta aagatcttag agaaattttt
      181 aaaaaaaatg cttttgaaat aggtatttgg tggttttcta aagaaaaaga agacttagaa
      241 aaaagaataa atgagagttt aaaatgagat ttgatttttt tgtttcaaag cgtttaaata
      301 tcagtagaaa taaagcctta gagcttatag aaaatgaaga gattttactt aatggtaaga
      361 gttttaaagc ttcttttgat gtaaaaaatt ttttagaaaa tttaaaaaaa acgcaagatt
      421 taaatcctga agatatactt ttagccaatg agttaaaatt ggatctttta agtgaaattt
      481 atgtttcaag agcagctttg aaattaaaaa aatttttaga agaaaatgat attgaaataa
      541 aacataaaaa ttgtcttgat ataggatcta gtacgggcgg ttttgttcaa attttacttg
      601 aaaatcaggc tttaaaaatc actgctcttg atgtgggtag taatcaactc catccaagtt
      661 taagagcaaa tgaaaaaatt atcttgcatg aaaatacaga tcttagagcc tttaaaagtg
      721 aagaaaaatt tgaacttgtt acttgtgatg tgagttttat ttctcttatt aatttacttt
      781 attatgtcga taatttagct ttaaaggaaa ttattttact ttttaaacct cagtttgaag
      841 tgggaaaaaa tatcaaaaga gataaaaaag gtgttttaaa agatgacaag gcaatcttaa
      901 aagcaagaat ggattttgaa aaagaatgtg ctaagttagg ttggctttta aaaaatacgc
      961 aaaaatcaag cattaaagga aaggaaggta atgttgaata tttttactac tatatcaaaa
     1021 attaatatta cttctttagc cataggttgt tttgatggta tgcatttagg acatctaaaa
     1081 cttgtaaaat atttagatga gaatggggct ttgctagtta ttaataaatt taaaggtcaa
     1141 tttctttgtt caaatcgtca aaaagaagaa atttcaggaa aaaaagttat agaagtggat
     1201 tttgaaagta taaaatcttt agatggtaaa gattttttaa gctttttgaa aaaagaattt
     1261 accagtttaa aatttatagt cgtgggttat gatttttctt ttgggaaaaa tagggcttat
     1321 agtgctaaag atattgagtt tttaagtggg ataaaaacta taatagttga tgaatttagc
     1381 ataggtggaa taggtgttca tgcaagttta attaaggatt ttttatcaag agcaaatttg
     1441 caaaaagcaa aagaattttt agggagaaat tatagcatca aaggaaaggt aattaaagga
     1501 caaggcttag gttctaaaga actttttgca actataaatt tagattgcga aggttatttt
     1561 ttgcctcaaa atggtgttta cgctactttg ttaaaaagtc aaagaaaaac ttataaaagt
     1621 gtgagttttt taggtgtaag atcaagcgat gaaaattttg ctatagaaag tcatatttta
     1681 gaagaattgg gtgaaaattt catgcaagga gagttttttg aactcgagtt tatatctttt
     1741 ctaagagaga atcaaaaatt tcaagatcta aaaaaactta aaaatcaaat tactaaagat
     1801 atagaacagg ctagagaatt attaaggaaa aatgatgaaa gatgaacttt ttaaacaaaa
     1861 ccctaaaaaa caatttgaat ttgataaaag cgtggctagt gtttttgatg atatgatcaa
     1921 tcgttctgta ccattttata gagaaaattt agaactttgt ggcaatttat tggctaaaat
     1981 tttacctaca aatgcaagtg tttgcgattt gggctgctca agtgctaatt ttttgatttt
     2041 tttggcaaat ctaagaaagg attttaaact ttttggcgtg gataattctg cttccatgct
     2101 tgaagttgca aaatcaaaag ctaaagctta tgggcttgat ataagttttt ttgaagctaa
     2161 tttatgcgaa tttgattttt ttacttgcga tgtttttgta gcaaattata ccatgcagtt
     2221 tattcgtcct cctaaaagac aagaattgct tgatcaaatt tataaaaatt taaactctaa
     2281 aggcattttg attatgagtg aaaaaatcct ttatgaagat gcttttttgt ctaaaaatat
     2341 catagaactt tatgctgatt ataaagaaaa acaaggctat tctaagtttg aaatcgcagc
     2401 taaaagagaa gctttggaaa atgttttaat tccttatagt caaaaagaaa atttaaatat
     2461 gctagaaaag gcaggtttta agaaaataga aagtattttt aaatgggcaa attttgaaac
     2521 tttcatagct tttaaggatt agaaatattt tcatcttccc attcatcttt tgggaaacct
     2581 atcttatatg cattaacaca atcttgacta atgatagctt tgtgtctgca ttctaaactt
     2641 cttttttttg cttcctcggg gtgattttga taatattcta cacttttggt ttgttcgcat
     2701 gctgcaaaaa atataccaat aaggcttaaa aaaagagtta ttttcatggt catttttcct
     2761 gtgtcatatt aacatcatcg ctaaagatag aactttgatt gttttctgtt gttttggaag
     2821 gataaatttc agaaggtgtt tctgctatag gtggtattat aatactttca ttattttctg
     2881 aactttggtt aatatctttt gtggtttttt ctttttttaa atcattttgt tttaaagctt
     2941 ctaatatttg attatcagat tttttcggtg tgtttggact gtatttaccc tcttcatttg
     3001 ttgatttaac accaactttt aatgcattaa tacaatcttc gctaagagtt ccgctttctt
     3061 tgcattcttt cgctttttct ttcgcttttt cttttgcttc gctaggaaga tttttgtagt
     3121 aattttctgt tttactatca caagctgtta tattaataac tattaaaatt gcaagtaaaa
     3181 tacttagtct tcgcatttat caatctccta aaatttttaa tatcttagca aacttgtata
     3241 aagcaacgat aaattatttt tcttcattgt aagaaaaaat aggtaaagac cattgatatt
     3301 tgatagctaa aagccttgca aaaactccta taaaaagagt taaaagtgtg caaactaggg
     3361 cattaagctc aagccaaatt attagagaat aatagattgc tcctgcaatt atggcaattc
     3421 ctgcataaat ttctttttga aacaccaagg ggattctcat acataaaata tctcttaaaa
     3481 ttccaccaaa aacaccggta attacagcgg cagcaacggc tatgataaag ccatggtttt
     3541 gatctatagc tatttgagct ccaagtatgc taaaaacaac aagtcctata gcatcaagag
     3601 ttagaaataa agtttcaagt ttggttacta cgcgcggaat ttttgtggct acaagggcgc
     3661 aaaaacagat taaaataata tattcaggat gtttaaccca agttaaagga taatgtccta
     3721 aaagcacatc tcgtatgctt ccgcctccaa ttgctgttac gagagcaata aaaataactc
     3781 caaaaagatc cattttgtgg cgtcctgcag ctaaagctcc tgtcattcct tctgcggaaa
     3841 tacctatgat ataaagagtg gttatcgtaa gagcatttat ctccataatt tataccttaa
     3901 aatttatcac aatttatttg atactgttta atattttcat catttacttc gtggtttggt
     3961 gcttgatagc attctttaaa tttcggagtt ttaataattt tcacataaaa acttggtata
     4021 gcaatacggt ttttaatgta ttgtggttct ttatcgtaaa gtactaaatt taaaacttcg
     4081 atactttgaa attctaaagc taaatttctt tctctttgtt cgatttcatt ccaaatttta
     4141 ttatttattt gtgcattttg tggggtaata ttactcatta aaaatactga attttgagca
     4201 gctttactaa agctaaaaga agcattaggc gcagtgtgtc ctcgtgtgta accactgttt
     4261 ttataattac tccaagtagt gcggtatttt ttaggaatat ttgtatcatc ttcaaagcga
     4321 gggcgttttt tgatttgtct atctttcaaa tttgaagctt ctaccttata agcaacagct
     4381 tttgtgcctt tgagtttata atcatagcaa tttagataaa aaaacttatc taagatttgc
     4441 gagcaattta tattgttaaa ataagaagaa aaatcagcac taggcttgta aggttctaag
     4501 gcaaaaatat taagagatat agtgagtaaa aagatgaaaa ttttcattta agttccttat
     4561 ctttactttt gcaaagatga tttaaaaagc attctttaca taaaggtttt ttagctttac
     4621 aggtgtaacg tccaaaaaga accatggctt gatgaagata gttaagatta tctttaaatg
     4681 tgcgtgttaa atcttcttct gtagcttctg gagtttttgc tttgctaagt cctaagcggt
     4741 gagaaactct aaaaacatga gtatctacag ccatgaaatt tgctccgcac cattctatta
     4801 aaactacatg agcggttttt tgtcctacgc ctgctaagga ttttaaattt tgttcatcaa
     4861 ggggaatttc tccgtcaaaa ttttcacaaa ctgcttttgc catttttata agattttgtg
     4921 ctttattatt aaaaaatgaa caagtttgta tataggtttt aagacttgat aaatttgcat
     4981 ttgcaaggga tttaatatca ggataagctt taaaaagatc aggagtgatg agattaactc
     5041 ttttatcagt gcattgggct gaaagcatta cgcagactaa aagctcatat aaatttgaaa
     5101 atttaagctc tgttacaggc ttgtcaaaat gttttaaaaa aagttctttg atttctaaat
     5161 ttcttttcat tttttaattt tagttaatta gctttaaacc aagtttagat ataattgatt
     5221 ttatatacat tttattaaaa aggaaaccta atgaaaaaat tttctttagt cgcagcaact
     5281 ttgattgcag gtgtagtttt aaatgtaaat gcagctacag tagctactgt taatggcaag
     5341 agcattagcg atacagaagt aagtgaattt tttgccccta tgcttagagg acaggatttt
     5401 aaaactttgc cagataatca aaaaaaagct cttattcagc aatatattat gcaagattta
     5461 attttgcaag atgctaaaaa acaaaattta gaaaaagacc ctttatacac aaaagaactt
     5521 gatcgtgcaa aagatgcaat acttgttaat gtttatcaag agaaaatttt aaatactatt
     5581 aaaattgatg cggctaaagt taaagctttt tatgatcaaa ataaagacaa atatgtaaaa
     5641 cctgcaagag tgcaagcaaa acatatctta gtagcgacag aaaaagaagc taaggatatt
     5701 attaacgaac ttaaaggttt aaaaggtaaa gaactagatg ctaaatttag cgagcttgct
     5761 aaagagaaat caattgatcc aggttcaaaa aaccaaggtg gtgagcttgg ttggtttgat
     5821 caatcaacta tggtaaagcc ttttacagat gctgctttcg cgcttaaaaa tggtactatt
     5881 actacaactc cggtaaaaac gaattttggt tatcatgtaa tcttaaaaga aaattcgcaa
     5941 gctaaaggtc aaatcaaatt tgatgaagta aaacaaggta ttgaaaacgg acttaaattt
     6001 gaagaattta aaaaagttat caatcaaaaa ggccaagatc tcttaaatag tgctaaagtg
     6061 gaatataaat aatgggtgtt ttagacattg taaaagcagg ggtgattagc ggagatgagc
     6121 ttaataaaat ttatgactat gctaaagcag agggttttgc tatccctgct gttaatgttg
     6181 taggaactga ttctattaat gcagttttag aagctgcaaa aaaagttaac tctccagtta
     6241 ttatccagtt ttcaaatggt ggggcaaaat tttatgcagg gaaaaattgt cctaatggag
     6301 aagttttagg tgcaattagt ggggctaaac atgtacattt acttgctaaa gcttatggtg
     6361 tacctgtgat tttacacact gatcatgctg caagaaaact tttgccttgg attgatgggc
     6421 ttattgaggc aaatgcacaa tataaaaaaa cccatggaca agctttattt agttctcata
     6481 tgcttgatct tagcgaagaa agtttagaag aaaatcttag cacttgtgaa gtttatcttc
     6541 aaaaacttga tgctttaggt gtcgcgcttg aaatagaatt aggttgtaca ggtggcgaag
     6601 aagatggagt ggataataca ggtattgata attccaagct ttatacccaa ccagaagatg
     6661 tagctcttgc atatgaaaga cttggaaaaa ttagtgataa attttcaatc gcagcaagct
     6721 ttggaaatgt acatggagtt tacaagccag gaaatgttag cttacaacct gaaattttaa
     6781 aaaattcgca aaaatttgta aaagataaat ttgctttaaa tagcgataag cctataaatt
     6841 ttgtatttca tggtggtagc ggtagtgagc taaaagatat taaaaatgca gtaagctatg
     6901 gcgtaattaa gatgaatatt gacacagata ctcaatgggc tttttgggat ggggtgcgtg
     6961 aatatgaact taaaaatagg gcttatttgc aaggacaaat tggaaatcca gaaggtgatg
     7021 acaagccaaa taaaaaatac tatgatccgc gtgtttggtt aagaagcggt gaagaaagca
     7081 tgataaaacg tcttgaaatc gcttttgaag atttaaactg tataaacaaa aactaagcat
     7141 tttaaaagct tagttttatt ttgttttaaa aatttttatc aaattaagta gcaatcttta
     7201 aaataaaatt tttaatgagg tattggtttc atggatatta aatcagatga aatttcagaa
     7261 cttgttttgc ctgaaggcaa agatgcaaga ggttctttgg tttattttaa aattattttt
     7321 attccagctt ttctttatat tttgatttta ttgggttatt ttaatgtaat tgactttaag
     7381 gtcgaattac atacggttat tatgacaggt gtgatttttt ttacagcatt gatttttgct
     7441 agacatagtg ctgagtatgc gtatagtatt tttgaacaac aaaaagatga atttaaacag
     7501 gctttaaaaa gacatattat gaggcatttt cttgccatag ggaaagacac gaaatcaaat
     7561 gccaattttg atgactttgc ttatacatat attaagggtg caagaaatga gaattttgct
     7621 agtataggtt cggcaatttt tccaatgatg ggaattttag gaacttttat cagtatagct
     7681 ttttcaatgc caaattttag ttctagtgat acagccgctt tagaacaaga aattgcagat
     7741 ttgttaagtg gagtgggaac tgctttttat gtttcaattt atggaatttt tcttgcatta
     7801 tggtggatgt tttttgaaaa atatggtaaa agcaaaatag atcgtttgct aaatcgtcaa
     7861 aaaaacgcta caagtggatt tttttggaca aaagaagagc ttgatcaaag atatttaact
     7921 gaaagtttgc aacattttga aaaaattgga gcaattttta aacaagttag taatgatgat
     7981 ttttttgcag agcttgatca tgctattgat agaaaatttg gtattttcca agatatgcta
     8041 aatgtagaag aaaaggctat tagattaagt agtgaacata tcaaacaaac catgggtgag
     8101 cttagtaaag cacaaagaga tcaacgcgat cttggaaagc tttatagtga aatgttaaat
     8161 ggtataggtt tgctcaatca aaatttaaaa gaaatcaata caagaatgtc agaacaatat
     8221 aatcgcttgc tcgatatcag tagtgataaa attcatcatc ttgataagac actaagtgca
     8281 ttcgatgaaa aaatagagcg ttttggtaaa aattttgaac tttatgaaaa agcaatgttg
     8341 gaaagtcaag aaaaggtttt tgagggattt aaagcaagct tgtttgaagg tatgcataaa
     8401 tttaaagaag tatatgaaga agaaaaaagt attgatgcta aaatcaaaat gatggatgag
     8461 cttaaaaaag aaatgaaagc acttgatgaa gaaacaagtc aaatgatgag caagctttct
     8521 ggggatgaaa atcagaataa agaaaatgaa accaaacaaa tagaagattt ttcagagtct
     8581 aagactgaag aaaatcaaga tgaaattcaa gcagaaatat ctaagcaaga aagcaatgat
     8641 gagctaaaaa atgaagataa agaaaataaa tgaaaaatga gtcaaaagaa gatagcaatt
     8701 tttggatagc ttatgctgat ttaatggcag gattgctgtt tgtttttatt ttgctaatag
     8761 gtgctattgt tgtaaaatat gttttaactc aaagtgattt aaaagaaatc aaagataatc
     8821 tcaataaaca agaggcacgc ttagaggaga gtaaagaaga gcttagaaat aaagaagcca
     8881 tagtgtttaa actaagttct gatttaaaca atgcttctag tgctttaaat cttgctaatt
     8941 ctcaaaaagc agaattagag gctaatatta caaattacaa gcagttaagt aaagatttaa
     9001 actcaacttt agataataaa gataagcaaa ttttgatttt actaggtcaa ctagagaaaa
     9061 aagatgaaga gcttaaaaat ttacaagaag attttcaaaa agctaaagaa aaggtgcaaa
     9121 atcttggttt gattcgtgaa aatttaagca aggaattaca aagtaagctt gataataata
     9181 tcactataga tgaaaagaca ggatctattt ctttgcctgc tgaagtactt tttgataaag
     9241 attcttatgt gttaaaaaat gaggcaaagg caagtttgag aaaaatctta agcgaatatt
     9301 ttgatgctat tcttgaagat ccaaaaattt tttctaacat tgaaaatatc attattgaag
     9361 gacatactga tagtgatgga tcttatattt ataatttaga tttgtcgcaa aaaagagctt
     9421 atgaggtgat gaattttatc tatacttttt ataagagtga taagcttcaa aagcttttaa
     9481 tggcaagtgg acgttctttt tcagatcccg tgtttgtcaa cggagttgaa gataaggata
     9541 agagtcgtcg catagaaata aaatttagca ttaaaaatga taatgcttta aaagatgtag
     9601 aaaaattctt tgaatttcat taaaacaatt agtcctatac aaaaaatcaa ttttaacgga
     9661 tttgaatttt atattaaaag agatgattta ttaggagaaa ttaatggaaa taaagctagg
     9721 aaacttgctt tttatatcca tcaaagatat cctaaaaatc aatcttttgt aagttatgga
     9781 ggaagccaaa gtaatgcttt ggcggcatta agtatttttg ctaaacaaag atcatataag
     9841 cttgtttttg cttgtgaaaa aatttctact tttcttaaga ataatccttg tggaaactat
     9901 gctttagctt tagaaaatgg tgttgatttt gtagaaaata tccattcttt atctttaaag
     9961 caatttgctt tgtctttgtg taaaaaagat gatattttta tagaacaagg catagctaat
    10021 ttagaagctc aatatggcta tatggaactt gctcaagaaa ttcaaatgca aagtcaaagt
    10081 ttaaagcttg attttgatat ttttttacct tcgggcacag gcacttcggc agcttttttg
    10141 gcaaagtatt ctaaatttaa agtatttact tgcgcttgtg taggtgatat taaatatctt
    10201 aaaaaacaaa ttttaacatt agatccaagc tatgattttt caaatttaga atttttaaca
    10261 agtgataaaa aatatcactt tgctagaccg tataaagaat tttatgagct ttatatgaat
    10321 ttaaagttaa agtgcaatat agaatttgac ttgttgtatg atattttagg attaagtata
    10381 gcattaaaac aagagtggaa aaaaccattg ctttatatac atcaaggtgg aattttagga
    10441 aattccacta tgctagagag atataaattt aaaaaactag tttaaaattc catagataaa
    10501 aatgattaaa ataatcaaag gcactatata ttttacataa taaaaccaaa ttccaaacca
    10561 tgaactttta agtgtattgt tattgctaag ttcttttaga ctttcttgtt tacctaaaat
    10621 ccaacctaca taaatgcagc aaaaaaatgc agttaaaaca aacaaaatat ttccactaat
    10681 gaaatcaaaa ctatcaaaaa tgttttttcc tttgatgata acaatatcac gccaaggccc
    10741 ataagttaga atacagggaa gattgccaag tatgaagata aaccctagag ttaggttaat
    10801 agaaagattt ttagaatatt taaatttttc ttctaatacg ctaataataa cttgataaat
    10861 tggcaagctt gtggttaaag ctgcaatcaa gagtaagata aaaaataaaa tacacacaat
    10921 ggtgccaaaa tggatatgag aaaatgctat aggtaaagtt tcaaaaacca aagaaggccc
    10981 gctatctgga gcaagtcccg ctgagaaaag tgctggaaaa atcataaaac cagccaaaac
    11041 agctatgata gtatttaaaa cccctgtata aatagcggtt tttgccatat tttcattttt
    11101 attaagatga gatgaaagtg ttatcattac cccaaaacct agggataaag caaaaaagac
    11161 ttgtcctaaa acatcgatta aaagttttgg tgataaaatt ttactaaaat caggttcaag
    11221 ataaaattta actccagcca tagctccatc aagggttaaa ttgcgtccta caacaataat
    11281 aagacagata aataataaag gcattaaaaa ttttacggat ttttctatac catctataat
    11341 gcctcttttt aaaataatat aattaataat tacaaaaaca gtggtaaaaa taccaactcc
    11401 taaaggattg aaggctattt tgtcgttaaa aaactgatga gtaaattctt tgcttactac
    11461 attggcaaga ctaaaattcc ctagggttaa ttcccaaata taaactaaaa cccatcctcc
    11521 aagtaccatg tagtaagcca ttatgccaaa gcttcctaaa agtcccatat atccaatact
    11581 ttgccatttt tgtttgaaag catctacgct atttgtcatc gcttttctgc ctatgatatt
    11641 ttcaactaaa ataacaggaa tgcctatgat aatcatagct atacaaaaaa ctaatacata
    11701 agcaccgcca ccattttctc ctacaagata gggaaaacgc caagttgctc caaatcctat
    11761 ggttgctcca gcaactgtta gaatataagt tagtgtgcta ctccatgttt gtctttgcat
    11821 gattatcctt tcgaaaaaga attattttac ctaaaaataa ctttaaaaac ttataagcta
    11881 tccatatagc ttatatcgta agtatttttt aagcgtttgt gtatcgtttc gtgccaattt
    11941 tgagatatga gagagtttaa tttttctaat ttatctaata aattcggatt ttgcttaaga
    12001 atttgatgcg gggagtaaaa aagttgattg agttcaaata cactaagtga agtagaattt
    12061 ttttctaaaa ttttaatgtt ttcatgcttt cgtatttgtc caacttgtaa aactttataa
    12121 taccatccac tcaagcccgt tttaaaaatt tcatgtgtaa aatttgaatt attgtgaatt
    12181 ctagaaattt ttacacaagg ttttctaggt tcgcttactt gcagtattgc atttgaaatt
    12241 tgatgtacat cacctatgca aacattttgt tcgcaaagcc catcgatgct caaattttca
    12301 cccattgagc caaaatttag ctttttatta agaaatcttt cccatatggg atagttttga
    12361 caagagttgg caaaaatagc cttatggtag cctccatgat gaattttatc agctatttga
    12421 tcatctaaaa cacctagaaa atcaatttgt gtttcttcta ggtaagtatc tttaataaat
    12481 gcgctttgga aatttttata gtttttaatt ttccctattt gcaaactttg aattttcatg
    12541 gttctatttt ttttaataaa tcatcagcac tgataaaacc cgtgattttt aatttttctt
    12601 ttccattttc aaagaaaatt aaaacaggtg ggccaaaaac attaaattct ttcatggttt
    12661 taatttgttc attattattt tcgcttacat caactttgat aagtttgtaa ttttgcattt
    12721 tttgtatgat tctttcatcg ctaaaggtta attcatctaa aagtttgcaa ttttcacacc
    12781 aagatgcagt aaaatcaagc attataggct ttgtatttgt ttgtatttct tgctttaatt
    12841 gttcaaaatt gttgatataa tcatagctta aagcatgttt tgaggcagat atagtattga
    12901 aatttaaagg atttaagaaa tttttagccc caaaaagtcc tcctagg
//
LOCUS       DARATF010000047        12894 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.047, whole genome shotgun sequence.
ACCESSION   DARATF010000047 DARATF010000000
VERSION     DARATF010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12894
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.047"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            64..771
                     /gene="ubiE"
                     /locus_tag="SB502_001062"
     CDS             64..771
                     /gene="ubiE"
                     /locus_tag="SB502_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEG0434513.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IEAGAQNLPLESQSLDILSISYGIRNVVERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEILD
                     YKSFSFGVSSMFIAKKL"
     gene            768..1931
                     /locus_tag="SB502_001063"
     CDS             768..1931
                     /locus_tag="SB502_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEG0434514.1"
                     /translation="MTPTELNLKAKALLETHFDDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLE
                     AQFLALKERLQKEGLFDPRFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NYKIQNYENLLLNLSKFFKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDK
                     LQNAYLQHENFFNKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
     gene            1941..3017
                     /gene="serC"
                     /locus_tag="SB502_001064"
     CDS             1941..3017
                     /gene="serC"
                     /locus_tag="SB502_001064"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEG0434515.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLALNGICEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKT
                     KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKAAMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            3014..3364
                     /locus_tag="SB502_001065"
     CDS             3014..3364
                     /locus_tag="SB502_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEG0434516.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDALFEKIGASKGDLIQIQILLANMQDFDAMNEIYDAWIKNYPKPVRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3361..4335)
                     /locus_tag="SB502_001066"
     CDS             complement(3361..4335)
                     /locus_tag="SB502_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEG0434517.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENTSDLGTKAALKAIERTNLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILTKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(4328..5314)
                     /gene="plsX"
                     /locus_tag="SB502_001067"
     CDS             complement(4328..5314)
                     /gene="plsX"
                     /locus_tag="SB502_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEG0434518.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNENATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLRLGRLKGISRPAIATLMPNIINKTLLLDVGANTDCKAENLFQFAIMGEVY
                     ARAIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINELIENELGKYNA"
     gene            complement(5320..5466)
                     /gene="rpmF"
                     /locus_tag="SB502_001068"
     CDS             complement(5320..5466)
                     /gene="rpmF"
                     /locus_tag="SB502_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEG0434519.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            complement(5490..5843)
                     /locus_tag="SB502_001069"
     CDS             complement(5490..5843)
                     /locus_tag="SB502_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434520.1"
                     /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINSKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCNN"
     gene            complement(5844..6257)
                     /gene="ndk"
                     /locus_tag="SB502_001070"
     CDS             complement(5844..6257)
                     /gene="ndk"
                     /locus_tag="SB502_001070"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEG0434521.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIDFFFKPNEIC"
     gene            complement(6370..6654)
                     /locus_tag="SB502_001071"
     CDS             complement(6370..6654)
                     /locus_tag="SB502_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0434522.1"
                     /translation="MAVKITDICIACGSCIDECPVSAIVDDVNNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            6860..7456
                     /locus_tag="SB502_001072"
     CDS             6860..7456
                     /locus_tag="SB502_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEG0434523.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
     gene            7575..8663
                     /gene="flhB"
                     /locus_tag="SB502_001073"
     CDS             7575..8663
                     /gene="flhB"
                     /locus_tag="SB502_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HEG0434524.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(8669..9412)
                     /gene="motB"
                     /locus_tag="SB502_001074"
     CDS             complement(8669..9412)
                     /gene="motB"
                     /locus_tag="SB502_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEG0434525.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQALENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(9415..10191)
                     /gene="motA"
                     /locus_tag="SB502_001075"
     CDS             complement(9415..10191)
                     /gene="motA"
                     /locus_tag="SB502_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEG0434526.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPKISQFDKG"
     gene            complement(10207..12846)
                     /gene="polA"
                     /locus_tag="SB502_001076"
     CDS             complement(10207..12846)
                     /gene="polA"
                     /locus_tag="SB502_001076"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEG0434527.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEHKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISV
                     SQEGYEADDIIASFVRTCEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPHQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRNLLLEGKENAFLSKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFGLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAHLAK
                     SYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
BASE COUNT         4246 a         1946 c         2056 g         4646 t
ORIGIN      
        1 aaataaattt tgcaaattgc ttaaaaaatc aagtaaaaat ttgaaaattt acaaaggata
       61 aaaatgcaaa aacaagaaaa aattatagaa atgtttaatc aaattgcacc tacttatgat
      121 aaggcgaata gaattttaag ctttggagct gatgtagcgt ggcgtaaaaa agcttgtcaa
      181 agagtgatga gtttgtattt aaaaaaagat ttaaaaatcg ctgatattgc ctgtggcaca
      241 ggggatatga tagagatttg gcaagagagt gctttaaaaa tggaaaaaaa tattctaaat
      301 attaaaggta ttgatccaag tagtggcatg ctaaatgttg caaaagaaaa atttccaaat
      361 gtcgaattta tagaagcagg ggcgcaaaat ttacctttag aaagtcaaag tttagatatt
      421 ttaagcatta gttatggcat tcgcaatgtt gtagaaagac aaaaagcctt aagtgaattt
      481 gctagagtac ttcaaaaaga tggtattttg gtagttttgg aatttacaaa aagagaaaag
      541 ggtggattta tagcagcttg tagagatttt tatcttaaaa atattttacc aagtataggt
      601 gggataatca gtaaaaataa aagtgcttat gagtatttgc caaactctat tgaaggattt
      661 ttaagtaagg aagagttcat cttagaactt aaaaatgctg gttttgaaat acttgattat
      721 aaaagtttta gctttggcgt gagttcaatg tttatagcaa aaaaactatg acaccaacag
      781 aattaaatct taaagcaaag gctttattag aaacacattt tgatgatata gttttaagtg
      841 gagaaatttc aaaaattact ttgcatggtt caggacattg gtattttgat ttaaaagatg
      901 aaagatcaag cattgcttgt gctatgttta aaggagctaa tttaaaagtc ggatttaaac
      961 cagctgtggg gaatttttta gagctttgtg gaagtgtaag tttatatcct gaaagtggtc
     1021 gttatcaatt tatcgctact agtatgaaaa aagcaggttt tggggatttg gaagcacagt
     1081 ttttggcttt aaaagagcgt ttgcaaaaag aaggactttt tgatccacgc tttaaaaaat
     1141 ctttgccaaa atttcctaaa aaagtaggca ttatcacttc aaaaacttct gctgctttgc
     1201 aagatatgtt aaaacttatt caccaaaaag aatatttttt ggcaaaaatt tatatttttg
     1261 atgctttaac tcaaggaaat aatgctcctt tttctcttat acaagcttta aaaaaagccg
     1321 atgatatgga tttagatgtt cttattatag cacgtggtgg aggaagcaga gaagatcttt
     1381 tttgttttaa tgatgaaaat ttagcaagag agatttttaa agcaaaaact cctattattt
     1441 cagccatagg acatgagatt gattatgtta ttagtgattt tgttgcagat tttagagctc
     1501 caacgccttc agctgctata gatactttgt tttattctaa gttggatata gagcaaagtt
     1561 tggatttaat ggaagaaaaa ttaatgcaac tttggaatta taaaatacaa aattatgaaa
     1621 atttgctttt aaatttaagc aaatttttca aatttaattc tttgccaaaa ataatagatg
     1681 aaaaaataaa acaaagccat aatatagaaa agcaattaaa tcatctattg gcaaatcaaa
     1741 tgcgttataa tgaattaaaa ttagataaat tgcaaaatgc ttatttgcaa catgagaatt
     1801 tttttaataa aagcaaaaag tttatttgta tcagaaaaaa tggtaaaata gcaaatttag
     1861 aagatcttaa gagtgatgat atcgttattt taagttctca aacttctcaa aaagaagcaa
     1921 aaattttata aggatagatt atgagaaaaa tcaatttcag tgcagggcca tcgactttac
     1981 ctttagaaat tttagagcaa gctcaaaaag aactctgtga ttatcagggt aggggttatt
     2041 ctataatgga aatttctcac cgcacaaaag tatttgaaga agtgcatttt ggagcacaag
     2101 agaaagctaa aaaactttac gggttaaatg atgattatga agtattattt ttacaaggtg
     2161 gagcaagttt acaatttgct atgattccta tgaatttggc tttaaatggg atttgtgaat
     2221 atgcaaatac aggagtttgg acaaaaaaag caattaaaga agcacaaatt ttaggtgtca
     2281 atgttaaaac cgtagcaagt agcgaggaaa gtaattttaa tcatattcct agagtggaat
     2341 ttagagataa tgctgattat gcttatattt gttctaacaa tactatttac ggcactcaat
     2401 atcaaaatta tcctaaaact aaaactcctt tgattgtgga tgcatcgagt gatttttttt
     2461 ctagaaaagt agatttttca aatattgctc ttttttatgg cggagtgcaa aaaaatgctg
     2521 gaatttcggg tttaagttgt atttttatcc gtaaagatat gttagaaaga tctaaaaata
     2581 aacaaattcc tagtatgtta aattatttga ctcatgctga gaatcagtcc ttgtttaata
     2641 cgcctccaac ctttgccatt tatatgttta atcttgaaat ggattggctt ttaaatcaag
     2701 gcggacttga taaagtacat gagaaaaatt ctcaaaaagc tgctatgctt tatgagtgta
     2761 ttgatttaag taatggattt tataaaggac atgcagataa aaaggacaga tctttaatga
     2821 atgtgagttt taatattgct aaaaataaag atttagagcc tctttttgta aaggaagccg
     2881 aagaagctgg aatgatagga cttaaaggac atagaatttt aggaggaatt cgtgcaagta
     2941 tttataatgc gcttaatttg gatcaggtaa aaaccttgtg tgaatttatg aaagaatttc
     3001 aaggaaaata tgcatgataa agcgttttga tgagtgcgat agaatgtcgc aaattattgt
     3061 ttttgataaa tattttaaga ctgcaggaca agtggctttt gaacctagcg gagatattaa
     3121 aaaacaaacc aaagaagcac ttgcagaact tgatgctttg tttgaaaaaa taggcgcaag
     3181 caaaggagat ttgattcaaa ttcaaatctt gttagctaat atgcaagatt ttgatgcaat
     3241 gaatgaaatt tatgatgctt ggattaaaaa ttatcctaaa cctgttagag cttgtgtagg
     3301 aagtgcttta gcagagggtt atttggtaga aattcaagct tttggaaagc taagagagaa
     3361 ttaaaaattc tctcctccaa attttaaaag cgcagatccc caagtaaaac caccgccaaa
     3421 agcatctagt aagatcagat ttcctttttt aagtcgtcct tcttcatagg catcattcat
     3481 tgccataggt atagaagcag ctgaagtatt gccatatttt tgtacagtga tcacacattt
     3541 ttcatcgctt agattgagtt tttcttggac ggctttaatg atgcgtagat tagcttgatg
     3601 aggaataaaa agatcaattt cttgtgctaa aatgttattt ttggttaaaa tttctacaac
     3661 atcattacta agcgtgttta ctgctatttt aaaaacttca ttgcctttca tttgcataga
     3721 aagtgtttga cataggcttg atttttgcga tctttgagtc attaaaagat ctccataatt
     3781 accattgctt gcagtatgta catcaaggat atgattttca ttatccaaac ttacaactcc
     3841 agcacctgca ccgtctccaa agagtatgca aatacttctg tcattgtaat ccataattga
     3901 acttgttttt tcagctccta tgattaaaac attttttttc aaaccacttt ctactaaggc
     3961 tttagcttgt tcaagcaaat agataaaacc agaacaagct gctgaaatat caaaagcgct
     4021 aatatttaca agtcctaaat ttgaagcaat tttacaagcg gttgaaggca tagtaaaata
     4081 atcaggactt aaagtggcta caagaatagc atcaatatct tcaggtttta aatttgttct
     4141 ttctatggct tttaatgcag cttttgtgcc caaatcgcta gtattttcat tttcactagc
     4201 aatgcgcctt tctttaatac ctgtgcgtct agtgatccat tcatcggtgg tatctaccat
     4261 tttttcaaga tcagcattgc ttaaaatttt ttctggaata taagaagcta tacttttaag
     4321 actggcttta agcattgtat ttcccaagtt cattttctat aagttcattg atatgagatt
     4381 ggctaaaatt tatagcttga aaaattgcat ttttaatagc tctagaatcg ctttttccat
     4441 gacttatgat cacgcagcca ttaactccaa gaaggggtgc tccgccatat tcttgccaat
     4501 ctgtgtgttt ttttaatttt ttaaaagatg gcttcatgag taaagcacct attttagaaa
     4561 taaaagattg ctttacttcg ttttttagaa gttgaaaaat agctgttgcc acaccttcac
     4621 aagcctttaa gataacattt ccatcaaaac catcacagac taaaacatct atttcaccat
     4681 tgaaaatatc tctaccttca gcattaccta taaaatttgg aatttttttc ataagctgat
     4741 gactttcttt ggtaagttca ttacctttgc attcttcttc accattagaa agtaaagcaa
     4801 ggcgtggttt ttgaatttgc atgattgctc tagcataaac ttcacccatt atggcaaatt
     4861 gaaataaatt ttcagcttta caatctgtat tagctccaac atccaaaagt aaagttttgt
     4921 taatgatatt tggcattaaa gtggcaatag caggtcttga aatgccttta agtcttccaa
     4981 gccttaaggt agccaaagac atacttgctc cactatgacc cgctgaaact acagcatcta
     5041 cttttttttc ttttaataaa ttaatagctt tatatatggt tgtttcttta ttttttaaag
     5101 catctgtggc attttcattc atcgaaaaaa tttcactagc ttcttcgtat tgtatatatt
     5161 gttctaattt ttttggtatt aaaggtttta gaattttaga atttcccact aagatagcgt
     5221 taaaaggttt tgcttctagc gcctttaaaa cgccttctat aatgggtttt tctccaaaat
     5281 caccacccat tgcatcaatg gcaatgttaa tcattgattt taatattcct tagttgttgg
     5341 attcgcacgg tgaggcattt tgtagcttcc atctttgtct tttataggca taggaagact
     5401 aactttatag tgagttctgc gtttagctgc acgagttttg ctcactcttc tctttggtac
     5461 tgccattttt tctcctttat aaaatttaat taattattgc aatttatgca ataaaaataa
     5521 tcacttaaat aagcttcaag ctcgctgata gcaacttcta ttaaatcaat atgtccatcg
     5581 aaaaattcta tagtattgct caattcgttt gcttcatctt taaaaatacc atcacttgca
     5641 aaaagttcta aattttcttt aatttcaagt tctaactcag ttccacaact atcacaaggt
     5701 ctatagataa aaccttgcat aatagcattt attttaacaa gcttagaatt tatttttact
     5761 aaatttccct caaaaatcat attttcaaga ttaagtttaa aaggatattc ctttgtatta
     5821 atcttagaaa aagggatttt catttagcaa atttcatttg gtttaaagaa aaaatcaatt
     5881 tctatttttg cattttccaa gctgtcactt ccatgaacag cattagcatc aatactctca
     5941 gcaaaatcgg ctctaattgt tcctgcttta gcttctttag gatttgtcgc tcccattaaa
     6001 tctctatttt ttaatacagc accttctcct tctagtacag aaacaacaac aggaccgcta
     6061 atcataaatt caaccaagtc tttaaaaaaa ggtctttctt tatgaacagc ataaaaattt
     6121 tcagcttgtt ctttactaag ttgaactttt ttcattgcag cgattcttaa tccattgctt
     6181 tcaaaacgat ctaaaatttt tcctataaca ccttttttaa cagcatcagg tttaattata
     6241 gataaagttt tttccatctt tgtaataact ccttatttta ataaagctta aaattatact
     6301 tgaatttgtt taaagaaagt taaattaaaa gaaaaagcta ggaatctcta gctttttaat
     6361 tttttaaaat tatgcaaaaa ctggagtgtc cccacttctc atatcagcgc caatattatc
     6421 acgacttggt tgtcctgatt ctacagcact ccaaactata catccatctg ttgggcaagc
     6481 actagcacaa gctggttgat cattatgtcc tacgcattca acgcatttgt ttgcataaac
     6541 ataatatcta tcttcgcctt ctggattgtt aacatcatca acgatagcac tcactggaca
     6601 ctcatcaata caagaaccac aagcaatgca tatatctgta atttttacag ccattttttc
     6661 tcctttttaa tattaagatt taaaagattt tagcataaaa ttcttaaata atgtaaattt
     6721 tgataatcaa aaatttacat tatttgataa taattataac tttcttaaat ttttaatatt
     6781 attttagata tttaaaaaaa aataaagatt taaacgatat aatttcgtta tcaataaaat
     6841 ttattattta ggagaaaata tgatagttac taaaaaagct ttagatttta ctgctccagc
     6901 agtattggga aacaatgaaa ttgttcaaga ttttaatctt tataaaaaca taggtccaaa
     6961 aggagcggta gtattctttt atccaaaaga ttttactttt gtttgtcctt cagaaattat
     7021 agcttttgac aaaagatatc aagaatttaa aaaccgtggc attgaagtaa ttggaatttc
     7081 aggagataat gaattttcac attttgcttg gaaaaatact ccagtaaatc aaggtggtat
     7141 tggtcaggtt aaatttccgc ttgttgctga cttaactaag cagattgcta gaaattttga
     7201 tgtactttat gcagaagcag ttgcccttcg tggttcgttc ttgcttgatg ctgatggaac
     7261 agttcgccat gctgtggtta atgatttacc actaggtaga aatatagatg aaatgttaag
     7321 aatggttgat actatgcttt ttacaaatga gcatggtgaa gtttgtcctg caggatggaa
     7381 taagggtgat gaaggtatga aagctaaccc taaaggcgtg gctgaatatc ttggcaaaaa
     7441 cgaagctaaa ctttaatttc ttagtataaa gcctctttac gaggcttttt cttcattttt
     7501 attctttaat tgaaattcat aaattttcta ctataatttt acacacatat taaaattttt
     7561 atttaggcta aaatatggca ggcgaagatc aagaaaaaac agaagaaccc acgtccaaaa
     7621 agatagaaga tgcgcgtaaa gaaggtaatg ttccaaagtc tcaagatgcg gcagctattg
     7681 taactttgat aattggagta actataactt tatttatgat gagttttatg ggcgagagaa
     7741 ttgtaaattt atatagatac tatcaaagtt ttattggtgt tgaatttgat ttgcgtatta
     7801 ttcaagccat tatgattaaa agcatttttg aggttttaat tattcttgca cctattgttt
     7861 taagtattat gattgctggg gttttgggaa atattatgca atttggtttt atttttacaa
     7921 ctaaacctat tatgccaaat ttaggaaaaa tcaatcctct aaaaggttta aaaaaccttt
     7981 tttcattgaa aaaaattgtt gaaagtataa aaattatttt aaaagtgggt attgttttta
     8041 ctatagcttt tatagtttta cttaaattta tgcaagagct tccaagagtt gagctttata
     8101 ctatggttgc acagcttact tggctaagag acagagctat tgttttagca gctattgtta
     8161 tagttgcttt tttaattatt gctgttttag atgttttttt ggtgcgtttt cagtatttta
     8221 aaggtttgcg tatgagcaaa caagaaataa aagatgagta taaacaaatg gaaggagatc
     8281 ctcaggttaa aggtagaatt cgtagacttc aaatggaagc tgcgcgtcgt cgtatggttc
     8341 aagatgttgc aggtgcggat gtggtgatca caaacccaac gcattatgcc gtagctattc
     8401 gttatgatac aagtaaagaa caagccccta gggttgttgc taaaggagtg gattttctcg
     8461 ctcttcgcat aaaacaagta gcctatgaaa ataatgttgt agtttatgaa aatcctcctt
     8521 tagcaagaga gctttataaa gcttgtgatg ttaatgatct tattcctagg gaaatgttta
     8581 aagctgtagc tgaggtgcta ggatttgttt ataatacaaa taataagagt cgtttagctg
     8641 gtcaagtaaa aaaaggaaac taaaactttt aaggtgcttt agttcctatt ttgttaataa
     8701 gctcaagaac cgatttttga gtacttgtat ctgctgtatc aactttaaaa tatatttcta
     8761 ctctattatt ttctagagct tgtggatttc cattgatagg attattaagc ccgtagcttt
     8821 taatgctaat gttttttaaa tttgctccac cttctataaa atattttaat acattttccg
     8881 ctctttggta ggcgagttca taacttctta taatagagtc gctattgtct gtatagcctc
     8941 taatttctat ttttgcttga ggtggcaaat atgttgttag ttcagccata cgttttaaat
     9001 aatcttgtat atcagctgaa acgatttgag cgctacctct ttcaaattca actttagatg
     9061 gaaggttaag agcaacctga ttgtcgcttt gatctagagc cgcttgaaga cgtttgatag
     9121 tttcttgctg cgtcatagtc atttgtttta atgatttgag ttcatcactt tcttcttttg
     9181 ctgcgccttt atatttttct tgagttttac tctcttcttt gactgtttga gtagaggtgt
     9241 aatcaaagat tttaacaaat tcagttttta aagcctctac tttagcagga tttgttttag
     9301 aaattgccca aagagcaata aaaagtgcca aaagcaaact tagaaagtct gcataaggta
     9361 cagcccattt ttcacctgca ggacattctg gacatttatg tttcttggcc atttttaacc
     9421 tttatcaaat tgtgaaattt ttggatcatc gtgacttaag aaattaaaaa gcttagcttc
     9481 caaatctcta gggttcgcac cttctgcaat tccttttatg gcttcagtga tgacaatttg
     9541 ctcttttaca agatccattc cgttagcttt catttttctt ccccaagggg caaaaagcgc
     9601 ataagcacca aaaatcccag taaccgtagc tgtaaaagca cctgaaatac ccgctgccat
     9661 tgcctgagga ttatctagta atttaagagc tagaataaga ccaaaaaccg caccaacaag
     9721 tcccatagta gggcaagttt ctccaaatac tatccaatat tctgcgcatt ctttataatg
     9781 ctcttcaagt tgttcggttt gtatttccat gctttcgtga atttcttcaa agcttttacc
     9841 atctacaagc atcatcatag cattttttaa aaattcattt tcaatctcat tggttcttga
     9901 ttctaatgct aaaagaccat ctcttcttgc aataatagca aattctatta actgggctat
     9961 cctttcaggt agatttactc cagaaccttt aaagacaact ttgagttctt tataagctgc
    10021 ttttacaatt tttttatgtg tagaagtcat tgcacaaaat gcagccgttg gcataactat
    10081 aagaaaggaa gaaagatgca caacatgtaa aggattacca ccttctagta tatctcctac
    10141 tgaaatacta gtaactgcaa gcaccattcc cagtatggtt gaaagatcca ttaaatatct
    10201 ccttgattat tttaaatcgc cccaattttt ggcgatactt gagcttgttt ttaattttac
    10261 ttttaatttt actatatttt ccataatatc tctagttttt ttcacaaaat tttcacataa
    10321 atcatctttt acttcaaaaa ttaattcatc gtgaatttgc aaaataagct ttttatcttc
    10381 atttaattcc ttgttgattt ctaacattgc aagtttgatt acatcagctg ctgagccttg
    10441 taagattgaa ttaatgcttt ctctttcata catggcaatt tgcataggtt ttgcgttttc
    10501 aaaatcaaaa taacgcttgc gaccgcttaa agtagtgata aaaccatttt gtttagcttt
    10561 gtttttaact gtttcaaaat atttcttaat actagtaaaa ttttcaaaat atttttctat
    10621 gtaagatttg gctaaatgag cttctatttt taaattttga cttaaagttt tatagcccat
    10681 gccataaata agtccaaaat ttatactttt tgcaacactt ctggtttcat aattgctttc
    10741 tccaaaaatc attatagctg ttcttgcatg tatatcttca tcgttagcaa aagcatttaa
    10801 aagtttttca tcttcgctaa aatgcgcaag cattctcagt tcgatttgag aataatcaag
    10861 agagataaaa ctaaatccat ctttagctac aaagcaagat ttataatctt ttgcgtattg
    10921 tccgtgtgca ggaatatttt gcaaatttgg atctttagat gaaaggcgtc ctgtagcggt
    10981 tccagtctgt aaaaaacttg aataaatgcg tgaattttta tcttttaacg ctagttttaa
    11041 caaaggttcg caataagtgg aataaagttt ggcaagttct ctataatcta aaattttggc
    11101 aattacagga tgtttatcta aaagtgcatt taaaactttt tcatcggtag aatatcctgt
    11161 ttttcctttt tttccacttg gaagtttaag tttttcaaaa agtatatcac ctacttgttt
    11221 aggtgagttt aggttaaatc tatcctcaca aagagtataa atttcttcac ttaaattttt
    11281 gatttcattt tcaaattttt tcataaggat ttcaagtgca tttgtatcaa gctttatgcc
    11341 attttcttcc atcatcataa tgattttaat gaaatcaaat tcgcagtttt tagcaagttc
    11401 tagcaaagga gtttcaagat tttttaaaaa ataaagataa aatcttaaag tgatataagc
    11461 atcttccgca gcatatttgc aagctttttc aagctctaca cttgcaaaat tttctccttt
    11521 tttaacaagg ctttcaaaat gtaaggtttc ataattaaaa agtcttaaag ctaaatcatc
    11581 catatttact cttaaagaag gatttttaag ccatgctaaa atcattgtat ctgcgtattt
    11641 ttgaggtaaa tttaatccaa aattgttttg aatgatttta aaatcatatt tgagattgtg
    11701 tcctataaca aaatgattaa agattacttc tatagctttt ttggcgcttt gcaatgagat
    11761 ttgctcacct actccaagat agttatgagt taaaggcacg taaaaagctt cattttcact
    11821 catgcaaaaa ctaaaaccaa caatttttgc ttcttttgta tcaagtcctg tggtttcggt
    11881 atcaaaagca ataatacttt ctttatcaag ggtatttaaa atttcaaaaa gtttgttttc
    11941 atcttgtatt aaagtggctt taaaacctaa atttttatct ttattatcag gattttgacg
    12001 cagtttttta agcaaagtat taagttcgta atgttctaaa atttcaagta tttttaaaag
    12061 aggttcttca tcaggataag ttgctttttc tataagatct tgcacttcta aattttcata
    12121 caaagaggct aattttttgc ttaaaaatgc attttcctta ccctctaaaa gcaaattacg
    12181 acttctttcg ttgcgtacta gggttaaatt ttcataaatt ccttctatac taccaaattc
    12241 atcaagtaag gttttagccc cttttgcacc tataccttta acgcctggaa tattatcaga
    12301 actatctccg caaagagcta aaaaatctct gatttgatga ggttttactc cgtatttttc
    12361 taaacacgct gcttcatcat agtcgttttt agaaatagga ctgtaaatgc ttgttttacc
    12421 atcttttatg agttgataaa gatctttatc ttgagtgata atgcgtacaa aaatatccct
    12481 atcttcacaa gttcttacaa aagaagcgat gatatcatcg gcttcataac cttcttgaga
    12541 aacgcttata aaacccattt tttctatcat ctctatgcaa attggaattt gttctagaag
    12601 ttcaggtggt ggtggagtgc gattttgttt atagtttgga tcaatttcgc tacgaaaagt
    12661 ttttcctttg gagtctaatg caaaaacaat ataatcactt ttatgttcat tttttaagct
    12721 ataaataaaa tttgcaaaac cgctaatcat tccactagct tgtccttgtg aatttttaaa
    12781 accttttaat gcgtagtaaa gtctgaaaaa aaatccaaaa gtatcgataa tagttaaagt
    12841 tttcataata atttcttctt taataaaata tatttttaag ctgtattatt tcaa
//
LOCUS       DARATF010000048        12720 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.048, whole genome shotgun sequence.
ACCESSION   DARATF010000048 DARATF010000000
VERSION     DARATF010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12720
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.048"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..351
                     /locus_tag="SB502_001077"
     CDS             <1..351
                     /locus_tag="SB502_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434528.1"
                     /translation="SFLKEKNQKIIFDFNKIDDFKIYFIDDKFEITPFGSSSQAFIVN
                     NNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLRKLKNFKYCLILENYDIFE
                     QEFENKENQTPSLF"
     gene            complement(343..795)
                     /locus_tag="SB502_001078"
     CDS             complement(343..795)
                     /locus_tag="SB502_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEG0434529.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLAK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMKIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIANNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            850..3396
                     /locus_tag="SB502_001079"
     CDS             850..3396
                     /locus_tag="SB502_001079"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEG0434530.1"
                     /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTRELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLDSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAKEVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVTNLEMGDEFEIHPYDGKIIKNGSAIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCTKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     ITLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNIPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYENK
                     ATLARRAEKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSDEHKANIYRYLNFNEIENFKLEN"
     gene            3456..4694
                     /locus_tag="SB502_001080"
     CDS             3456..4694
                     /locus_tag="SB502_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEG0434531.1"
                     /translation="MKLLFASFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVTYLPKLQQFDFLLLKIAIDPIAYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWKEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     NLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALENYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANFNTVDDLGFNALDFALAAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            4691..5440
                     /locus_tag="SB502_001081"
     CDS             4691..5440
                     /locus_tag="SB502_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEG0434532.1"
                     /translation="MKTAFITGASSGFGRACVEAFMQEGYKVIALARRKERLEELKNA
                     HKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKAVIPTLRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5437..7170
                     /locus_tag="SB502_001082"
     CDS             5437..7170
                     /locus_tag="SB502_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEG0434533.1"
                     /translation="MNKFLVLLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFAGVLSGTFLLSLSANIFKAQHLTFVNYYNTAVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFATRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISDISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGALNTAELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASANPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            7167..8240
                     /gene="trmA"
                     /locus_tag="SB502_001083"
     CDS             7167..8240
                     /gene="trmA"
                     /locus_tag="SB502_001083"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEG0434534.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFTSKDKHYRTR
                     AELSFYHENDTLFYAMFDPKSKKKYIIEYLDFADEKICAFMPKLLEYLHQDNKLKEKL
                     FGVEFLTTKQELSVTLLYHKNIEDIKSNLENLSNNLHINLIARSKGKKLIFKTENLRQ
                     TLNIQDRKIFYEFNNDCFIQPNTAINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKVLATEISKSNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRVE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(8227..8643)
                     /locus_tag="SB502_001084"
     CDS             complement(8227..8643)
                     /locus_tag="SB502_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HEG0434535.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGAFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            8762..9175
                     /locus_tag="SB502_001085"
     CDS             8762..9175
                     /locus_tag="SB502_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEG0434536.1"
                     /translation="MNEKETISYIINTSKNIAIFALSPDKTKASYRVAEFLQRKNYKI
                     FPIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVEKNIKNLWLQLG
                     ISNETAKKECKKLDINFIQNRCIMLEYPYFKTKEK"
     gene            9175..10386
                     /locus_tag="SB502_001086"
     CDS             9175..10386
                     /locus_tag="SB502_001086"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEG0434537.1"
                     /translation="MLELNKIYKAKQQISGFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSAEQKQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPEST
                     PLLKVSATKALGAEVILKGDNFDEAYVFATSYAKENNLSFIHPFEDEFVMAGQGTLIL
                     EMLDEISDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVATLLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(10383..11108)
                     /gene="truA"
                     /locus_tag="SB502_001087"
     CDS             complement(10383..11108)
                     /gene="truA"
                     /locus_tag="SB502_001087"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEG0434538.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGALSHLGIFSPL
                     LMASRTDKGVHASYAVASVECGDYFTNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVR
                     FDVKSREYRYIFSHASYSPFMASYVHFYPKFDLGKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(11105..12130)
                     /locus_tag="SB502_001088"
     CDS             complement(11105..12130)
                     /locus_tag="SB502_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEG0434539.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDGDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFK
                     KMILSRY"
     gene            complement(12130..>12720)
                     /locus_tag="SB502_001089"
     CDS             complement(12130..>12720)
                     /locus_tag="SB502_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEG0434540.1"
                     /translation="TCKCHLPISLLINEILGAILLILVYSLSQNFYDFLFLSLFLFNL
                     FLLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSGGFLLNAFSFGGF
                     VFLLKSLVFFLMNFQKKDEILENLGDADIIIMSCIGGILGFEYGFLVLFIASILTLPF
                     FIFFRIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
BASE COUNT         4722 a         1931 c         1991 g         4076 t
ORIGIN      
        1 tcttttttaa aagaaaaaaa tcaaaaaata atatttgact ttaataagat tgatgatttt
       61 aaaatttatt ttattgatga taaatttgaa atcactcctt ttggttcaag ctctcaagcg
      121 tttattgtaa acaacaacca aaataccttt gaattctgga aagaaaaatt taaaaacata
      181 aaagacttta aaattgcttc taaaaattct ttattttgcg atttttccta taatcagctt
      241 tcagatttaa gaaaattaaa aaattttaaa tattgtttaa ttcttgaaaa ttatgatatt
      301 tttgaacaag aatttgaaaa caaagaaaat caaaccccaa gcttatttta aattcactcc
      361 ttcattttca agcaaaaatc tttttatttc aagccctcca ttatatcctc ctatgccatt
      421 gtttgcaata actctatgac aaggtataaa aataggaatt tgatttttag aatttgcatt
      481 tccaacggct ctaaaagctt ttggatgatt aattttttct gctatatctt tataagtagc
      541 tattttgcca taaggaattt tcattaaagc cttataaacc tttgattcaa aatctgtacc
      601 ttgtatcaaa acaggaatgc taaattttct aagcttatga gtaaaatata aatcaagttc
      661 atattttgct aagtcaagca aactacaatt tttttctgat cttttattat cacaaaaatc
      721 gactctagtt aaaaattttc catcactatg taaagatagg taacataaag gcattttata
      781 ataaacttta aacatttttt atccttcaaa gagctacaat tataataaaa aatatttaag
      841 gagtagaaaa tgtcttttat gcaagaatac aataaacttg ttgaagaaag agccgctttg
      901 ggtataccac cccttccttt aaatgcaaat caaactagag aactttgtaa attacttgaa
      961 aatgaaaata atgaagagct tgcaaatctt ttagaaaata gagtaaatcc tggtgttgat
     1021 gatgcagctt tagtaaaatg tgaattttta gattccatac ttaaaggcaa aatcagtgct
     1081 ccaaatatag acaaaaaaag agccttaaga atgcttggaa ctatgctagg cggatataat
     1141 gttaaagttt taatcgatgc cttaaaagat gaaaacatag ccaaagatgc tgcagaagtg
     1201 ttgaaaaata ttatttttgt acatgataat ttccatacca tagctgaact tagtaaaaac
     1261 aatccacacg ctaaggaagt tttacaaagc tgggcaaatg cggactggtt taataaaaaa
     1321 gaaaaactac cacaagtgat taaatgtata gtttttaaag tagcaggcga aacaaatacc
     1381 gatgatctaa gccctgcagg agatgctttt acaagaagcg atattccttt acatgcaaat
     1441 gccatgctaa aggtaagaca aacaggatcc ttagaaaaaa tcaaagagct taaaaaaagc
     1501 ggtcgcgaag tggtttatgt aggtgatgtt gtaggaacag gttcaagtag aaaatcggca
     1561 ataaattcca tacaatggca cttaggaaaa gaaatagaag gtgtgccaaa caagcacagc
     1621 ggtggtatag taatgggttc aaccatagca ccgattttct ttaacactgc tcaagatagc
     1681 ggggctttac ctatcatctg tgatgtaaca aacttagaaa tgggcgatga gtttgaaatt
     1741 catccttatg atggaaaaat cataaaaaat ggctctgcaa tcgcagaatt tacactcagt
     1801 ccaaacactc tcttagatga agttagagca ggaggaagaa tcccacttat cataggtcgt
     1861 gggctttgta ctaaggctag agaattttta ggaatggaaa gcgaaaatat ctttaccaaa
     1921 cctgaacaac ctaaatcttc aagcggtggt tataccttgg ctcaaaaaat gctaggtcgt
     1981 gcctgtggag ttgaaggtgt gcgtccaggt atgtatatag aacctataac tttaaccgta
     2041 ggctctcaag ataccacagg tcctatgact agagatgaaa ttaaagaact tgcaagccta
     2101 ggttttaatg cagactttgt tatgcaaagc ttttgccata cagctgcgta tccaaaagta
     2161 agcgattcaa atttacataa aaccttgccc aatttcatga caagtcgtgg tggggtaagt
     2221 ttaaaaccag gtgatggagt tatccactct tggcttaatc gttttgtatt accagatact
     2281 gtaggaacag gcggagattc tcatacacgc tttcctatag gaatttcttt ccctgcagga
     2341 agtggacttg tggcttttgc tgcggttact ggttctatgc ctttaaatat ccctgaaagt
     2401 gttttagtgc gttttagcgg ggaattacaa gctggagtta ccttaagaga tttggttaat
     2461 gctatacctt attatgcaat caaacaagga caacttaccg ttgaaaagaa aaataagaaa
     2521 aatatttttg caggaaaaat tttagaaata gaaggcttgc caaacttaaa agtcgaacaa
     2581 gcttttgaac ttagtgatgc aagtgctgaa agatctgcag ctgcttgcag tgtggattta
     2641 agcatagaaa gtgtaagcga atatatcaaa tccaatattt ctttaattga agctatgata
     2701 gaagcaggat atgagaataa agctaccctt gctagaaggg ctgaaaaaat gagagaatgg
     2761 cttaaaaacc ctactctttt aagagcagat aaagatgcaa aatacgctta tattatagat
     2821 attaatctta atgacattaa agagccaatc ctagcttgtc caaatgaccc tgatgatgtg
     2881 gcaaccttaa gcgaaatttt agccgatgat aagcgtccaa aaaatataga tgaagttttt
     2941 gtaggttctt gtatgacaaa cataggacat tatagagctt tgggagaaat tttaaaagat
     3001 aaaggcatac ttaaaaccag actttgggta gtgcctccaa caaaaatgga taaagcacaa
     3061 cttaccaatg aaggttatta cagcatcttt ggcgcagcag gtgctagaat agaagttcct
     3121 ggttgttctt tgtgtatggg taatcaagct agagtaaatg atggagctgt agttttctca
     3181 acttctacaa gaaattttga caaccgtatg ggaatgggtg ctaaagtata tttaggcagt
     3241 gcagaacttg cggcagtttg tgcgattttg ggtaaaattc caagcaagga agaatactta
     3301 caaattgtta gcgaaaaact aagtgatgag cataaagcaa atatctatag atatttaaat
     3361 tttaatgaga ttgaaaattt caaacttgaa aattaattca aatttaatac ttatttggat
     3421 taaataacaa aattaaaatt ttcaaaggaa aaatattgaa gttattattc gcttcctttt
     3481 gttgttttgc aagtttaatg gctagtgatg ccattaactg cgacaacatt aaaaataata
     3541 aaacattgct aaatgaaagt tcaaatttag attatttaaa tatagcttca agctgtaaag
     3601 aatctttaaa aaatcaagat tttacaaaaa aactctatgc aatttccaat gaaattcgcg
     3661 gaagcaatag ctcttgtaat ggtgtgactt atttgccaaa attacaacaa tttgattttt
     3721 tattattaaa aatagctatc gatcccatcg cttatcaaaa aactttagat acacccgaaa
     3781 atttagaaaa aaaatatgat attttaaaat cttattttag atattgggca tatcaaagta
     3841 taggaaattt tagactttac aaagcttttt ggaaagaata caataacgct atagaacctt
     3901 tagaaaaata ttttgaaagt aattttaatt ttgataaagg tagtaatatt tactatacta
     3961 gcaatgcctt aaacgaattt ttaaattggg ctgttggtga aacaaaaatt tacaaagaca
     4021 ttagtccttt agcaaaaatc atgtcaaata aaaattattc agtatcttat atacaagatt
     4081 ttattttttc aaataatcca agccaagata atcttactat agccttgcaa gcagcgcttc
     4141 taaatcaaag agaaaaagaa attttagaac ttttgattcg ttttggtgct aggattgacg
     4201 aaggttatga aagtgctatt ttttacgcat tggaaaatta tgaaaataca aactttttaa
     4261 tccaaaatgg agcaaatgtt aatcaagcca atgcctttgg taaaaccccg cttttttatg
     4321 ccatagagtt taatcgtctt gatatcataa aactacttct tgataatgga gcaaatgtta
     4381 atcaaaaata tattaataac aatgaaaaat tagcattaag tgcgaacata ggttcaaata
     4441 cgccttattt tattacattt tgtgctctag agcacacttc aaaaaatgtt ttaatgcatg
     4501 ctgcggccta tggaaatgtt gaaattttaa aacttcttat ttcaaaagga gcaaatttta
     4561 atactgttga tgatcttggt tttaatgcac ttgactttgc gctagcagca ggtaaaaaag
     4621 aaaatgctga ttatctaaaa agcttaggtt taaaagcaaa cgaaaatcta ttttacggag
     4681 gtagtttaga atgaaaaccg catttattac aggagctagt tcaggttttg gtagagcttg
     4741 cgttgaagct tttatgcaag aaggctacaa agtaatcgcc cttgctagac gcaaagagcg
     4801 tctagaagag ttaaaaaatg ctcacaaaga taagatttac acgctttgca tagatgtaag
     4861 aaatcaaaaa gaaatctttg aggctattga aaatttaccc aaagaatttc aagaaattga
     4921 tgtgcttttt aataatgcag gtttagcttt aggggtagat gaatttgata aattaaacct
     4981 tgaagatatt aacactatgg tagatacaaa catcaaagga tttttatatg ttgcaaaagc
     5041 tgttattcct acacttcgca aacaaaaaaa tgcttatatt tttaacttag gttcggttgc
     5101 aggaagaaat ccttattttg gaggcaatgt atattgtgga accaaagcct ttgtaggaca
     5161 attttcattg gccttaagaa atgatcttag aggaagcaat atcaaagtaa caaacattgc
     5221 tccaggactt tgcaaaactg aatttagtga agtgcgtttt aaaggagata tccaaaaagc
     5281 tgatgcagtg tatgaaaata cgcaatttat cagtgctaat gatattgcca aagtggtaat
     5341 gtctatcatt aacctaccaa gtcatattaa tgttaatgaa atcgagctta tgcctgtcac
     5401 acaaacttgg aatggatttt atatagaaag agatgaatga ataaattttt agttttattg
     5461 tttttacctt tagttgcatt tgcaaactcc tcagaagcag ctgcaaatgc taatttattt
     5521 ggagctttta cacttatacc gcctttagtt gctattgctt tagcctttat cacaaaagat
     5581 gttattttgt cactctttgc tggagtttta agtggaactt ttctgctcag tctttctgca
     5641 aatattttta aagcacaaca tttaactttt gtaaattatt acaataccgc agtagaatct
     5701 ttttcaaaga ttatttctta tatcttaggt tcaacttcag atccagtaaa tgcaggaatc
     5761 attttacaaa ttctttgcat aggtggtctt gtggcactca tcacaaaaat gggtggtgca
     5821 aaagctgtag cattaaaatt tgccacaaga gccaaatcag ctgtatcagc tcaagttaac
     5881 acttggtttt tagggctttt aatatttttt gatgattatg ctaatttact gatcgtaggt
     5941 ccaattatgc gtcctttggc agataaattt aaaatttctc gtgaaaaatt tgcctttatt
     6001 atcgactcta ccgcagctcc tgtagcagga atagctgtaa tttctacttg gataggctta
     6061 gaagtttctt taattaaaac cgcttatgaa cacataggca ttagcgatat tagtgctttt
     6121 ggaatttttg tcgaaaccat accttatcgt ttttataata tcttcatgct tttttttgta
     6181 gtcatgactg caatcatggg acgtgagttt ggttctatgt acaaggctga agtgcgtgca
     6241 agaaccacag gacaaattgc acctctacct aaatcaggcg cactaaatac tgctgaatta
     6301 gaagatcagt ttttagcgcc aaaagaaggt attaaaattc gtgcttttga tgctattgtt
     6361 cctattttta ctttaatcat tttagctata ttaggatttt attttaatgg acttagcact
     6421 ttagaaggcg aagaacttgc aaaagcaagt gctaatcctt tgtcttttga aacttttagg
     6481 gctgcttttg gaaatgctga ttcttctgtg gtattattcc aagctgcttt gtttgctgct
     6541 attgtagcga tttttatcgg agttcgtcgt aaaattttca atcttaaaga agcggtagaa
     6601 acttggatat atggctggaa aaccatgatt tttactatag tcttactttt atttgcttgg
     6661 tcgctttcaa gtatagtaaa agatctaggg acttctttat ttatcactag tttgcttgca
     6721 gataaattgc ctgagtttat tttgcctgct actatttttg cttttgcttc agctatttct
     6781 tttgccatag gaacaagcta tggaactatg gggattttaa tgcctttggc tgtgccttta
     6841 gctcatgaaa tcgccaaaat caatggtatg gatgcaaatg ctatgcatca ttatatggtc
     6901 attaatataa gctgcgtttt aacaggtgcg atttttggaa accattgctc accaatttca
     6961 gataatgtaa tcctttcatc catgagtgca aaatgcgatc atatggagca tgtaagaaca
     7021 caaattcctt atgctttatt tatctgtggt atttctttaa tcgctggata tattcctgta
     7081 tctttaggac ttagcgtttg gtttgtcttg cctttaaatt tcatacttat tgcgctttta
     7141 ctaagactca tcggaaagaa agttccatga gtcttgaaaa ttttggaaat tttctcactt
     7201 tagatgaaaa acactctttc ataaaaaaat attttaaaga attttataca aaggatttta
     7261 aactttttac ttcaaaagat aagcattatc gtacaagagc tgaactttca ttttaccatg
     7321 aaaacgatac gcttttttat gcaatgtttg atccaaaaag caaaaaaaaa tacattatag
     7381 aatatttaga ttttgctgat gaaaaaattt gtgcttttat gccaaaactt ctagaatact
     7441 tgcatcaaga taataaatta aaagaaaaac tttttggcgt ggagttttta accacaaagc
     7501 aagaacttag cgtaacctta ctctatcata aaaatataga ggatataaag tcaaatttag
     7561 aaaatttaag caataatctt catatcaacc ttatagcaag aagtaaaggc aaaaaactta
     7621 tttttaaaac agaaaatcta agacaaactt taaatattca agatagaaaa atattttatg
     7681 aatttaacaa cgattgtttt attcagccta atactgctat aaatgaaaaa atgattactt
     7741 gggtgtgtga aattttaaat actcaaaaaa gaatggattt acttgagctt tactgtggat
     7801 atggaaattt tactttagct ttagcaccat tcttttttaa agttttggcc actgaaattt
     7861 caaaaagcaa tattaatttt gctttaaaaa attgtgagct taataataca acaaatatcc
     7921 actttgcaag actttcaagc gaagaattaa gtcttgctat caaaaaagaa agagaatttt
     7981 ttcgtttaaa agatattcga ttggatgatt ttaatttctc tcatgtttta gttgatccac
     8041 cccgtgcagg acttgataaa agcgtaattg acttaataaa aaaatatgaa aatattattt
     8101 atatttcttg caatcctatc actttaaaag aaaatttaaa agaattaagc ctaacacata
     8161 gagtggaaga gtttgctctg tttgatcaat ttgtcaatac tccacatctt gaatgcggag
     8221 tatttcttag caaggtataa aaaaataatt cattaattta gcgagtatta ctatcgcgat
     8281 acaaagcaca aatacaaaag ggtggataaa agcaccaagt gggtttttct tctttaatat
     8341 aaaatgacaa aataaagaaa aaacaactaa agataaaatt ccaaaagcca aaataatttt
     8401 tacagcaaaa agtaaattta aaggtttaaa atgaaaacct gccaaagcac ctccgcttaa
     8461 aaaaagcaaa agaaccacaa aaggcattat tttaactcca gtagcactaa aaagactttt
     8521 gtcaaaatta ggatttttct ttttaactac acccaaaaca aatacatcaa caaacaaata
     8581 acctataaac aaaatagcac aaagaagatg gattgttaaa gtatatggat aaaattcttc
     8641 catttttccc tccttattaa acttcggaat ttgctatatt ataacacttt tttcattttt
     8701 tgaattcact ttagttaatt ttttaatcat ttaagataaa ataccaaaat aaaggttaac
     8761 aatgaacgaa aaagaaacta tctcttatat tataaataca agtaaaaata ttgccatatt
     8821 tgctttaagt ccagataaga caaaagcttc ttatagggta gcagaatttt tacaaagaaa
     8881 aaattataaa atttttccta tttatcctaa agaagagttt attttaaatg aaaaagttta
     8941 tagaaattta gatcaaatag aagaaaaaat cgatacactt atacttttta gaaaaggcga
     9001 agtggcacta gaaattcttc ctaagcttgt tgaaaaaaat attaaaaacc tatggcttca
     9061 acttggtatt agcaatgaaa cagccaaaaa agaatgtaaa aaattagata taaattttat
     9121 acaaaatcgt tgcattatgc tagaatatcc gtattttaaa acaaaggaaa aatagtgtta
     9181 gagcttaata aaatttacaa agcaaaacaa caaatttcag gatttgtaaa caaaactcct
     9241 ttcatatact cttctttttt aagtgatatt tgtcaaagtg agatttatct taaaaatgaa
     9301 aatttacaaa ttacaggtgc ttataaaatt cgtggagctt ataataaaat agccaatctt
     9361 agcgctgaac aaaaacaaca cggagtcatt gcggcaagtg caggaaacca tgctcaaggc
     9421 gtggccatta gtgcaaaaaa atttggcatt aaagcagtta ttgtaatgcc agaatccact
     9481 ccgctcttaa aagtttctgc tacaaaagcc ttaggagcag aggtgatact caaaggggac
     9541 aattttgatg aagcttatgt ctttgcaacc tcttatgcta aagaaaataa tcttagtttt
     9601 atccatcctt ttgaagatga atttgtaatg gcaggacaag gaactttgat acttgaaatg
     9661 cttgatgaaa taagcgatct tgatatgatt atcgcacctg ttggaggtgg aggacttata
     9721 agtggtatcg caagtgcagc taaacaaatc aatccaaaca ttaaaatcat cggagttgga
     9781 gccaaaggag ctcctgcaat gtatgaaagt tttcatgcca aaaaaatcaa aaatgcaaaa
     9841 agcgtacgca ctatagccga tggtattgct gtgcgtgatg caaatcctat taattttaat
     9901 attattttag aatgcgtaga tgattttatc caagttgatg atgaagaaat cgctaatgcg
     9961 gtattgtttt tacttgaaaa acataaaatc atagttgaag gcgcaggagc tgcgagtgta
    10021 gccaccctac ttcatcaaaa aataaataca caaaatcata aaaaaattgg cgtagtttta
    10081 agcggaggca atatcgatgc acaaatgcta aatatcatca tagaaaaagg tttatttaaa
    10141 tcttacagaa aaatgcaaat tcatgttact ttagtagata aacctggggc attattacac
    10201 cttacagaca gcttaaaaat agccaatgca aatatagtaa aaatcgacta tgatagattt
    10261 tctaccaagc ttgattatgg cgatgcgatg atttcaatta ccctagaaac caaaggtaaa
    10321 gaacaccaag aagaaataag aaaaatttta acccaaaagg cttttaattt ctatgaaagt
    10381 ttttaataac atatacggct taaataaagc ccatttggcg gtgctaaaaa gtgattgtat
    10441 tgctttttag cctcaatctg ttctttgagt tctttttcac tcatttttcc ttctaaaact
    10501 tttaaaacgc ttgctacgct taatctaatt tgccctctta aaaaaccatt agctttaaaa
    10561 tgaaaaatgc taaaatcttt ataagcataa gctctagcaa taaaaatttc tcttaaagtc
    10621 gttttattat cccctccact tttgcaaaaa aactttaaat ccttttttcc tacaaaaaaa
    10681 cccaaaagct cattagcttt acctaggtca aatttaggat aaaaatgtac ataagaagcc
    10741 ataaaaggac tataagaagc gtgagaaaat atatagcggt attctctact ttttacatca
    10801 aatcttactt caaaatcatc ttttactttt tcaatttttt tgatatggat aaaaggatgg
    10861 gaaaatttat taagttgttt ttgaagatat tctaaatttg taaaataatc tccacactcc
    10921 acactagcta cagcatagct tgcatgtact cctttatctg tacgagaagc cattaaaaga
    10981 ggtgaaaaaa tacccaaatg cgataaggcc ccacttaaag catcttgaac acctttttta
    11041 tgaggctgag tagcagaacc taaaaaagca gagccatcat aagaaaatat aatttttatt
    11101 ttcatcaata tcgactcaaa atcattttct taaaacaata agccgaaaca aataaactta
    11161 aagaaaaaat tccaagacaa gccaaaattg gaggttgaga aaaagaactt aaaagtccaa
    11221 aatatatagc aatcactcca aacataccta aatacacata gcctttttca taacgataag
    11281 taaccaaacc aaaacaaagc gcaaaaagcg tactagcaag tggaaacaag gctatagttg
    11341 tataaatcac aaattctctt gctctttgtg gattttcgtt taaatcattc cagtattcat
    11401 aaaatttctt tgtttgaaga ttgtctgtat taaactgagt atttactact aaagtgtcaa
    11461 attctccact aaaaatactt tgaccttgct caaaattata cattttgcct tgatttaagc
    11521 taaaagcaaa gctatcatct tttctttgca catgcgcttc tttggctatg ataagttgtt
    11581 ctttatcatc tgctttatgt ttagggcgat acataattat gttttcatac ttatcaccat
    11641 cttgtttttc tataaaaatc atccagtcta aaaatttttg tccaaattct cctgttttgt
    11701 agttaaattt cacttgagtg cttttatagt ttacaaagtt atcctgaagt tcaaatacta
    11761 taggtatcat taccaaagcc acaacaagca taaaagcact aatcaagctt gcaattttaa
    11821 ggaaaaattt tgccaaaatc attggtgaaa atcccaaagt aaaaagcact atgctttcat
    11881 tttccttaga aagcctaaac aaagccaaag ttaaagaaat aaaaaaagat ataggcaagg
    11941 taaaaattaa aattctaggc aacataaacc cataaagctt taaaagatcc aaaaaactaa
    12001 tctctatact tgaagtaagt tttgcaagtt gaataaaaaa caccatagat acaatagcaa
    12061 aaagtacgaa aaatatagac aaattcgtac ttaaaaattg atttaaaaca tatcttaaac
    12121 taagcttcat tagaataatc ctaagttttt ataaaataaa actgccacaa aagcgatatt
    12181 taaaaagggt atcatagcaa gttcttgctc ttttattgct ttaattctaa aaaaaataaa
    12241 aaaaggcaaa gtcaaaatag aagctataaa taatactaaa aatccatact caaaacctaa
    12301 aattccacct atacaagaca taataataat atcagcatca cccaaatttt ctaaaatttc
    12361 atcttttttt tggaaattca ttagaaaaaa aactaaactt tttaataaaa aaacaaatcc
    12421 tccaaaacta aaagcattta gtaaaaaacc tccactaaac tctttaaaaa tcaaaaaatg
    12481 taaaatttca ctctccctaa aggcgtaaaa aaaagcaaat aaaaaagcac tccaaagtaa
    12541 aatttgtggt acggctttga gtttaatatc aattaaagaa agtaagaaaa gattaaataa
    12601 aaatagagat aaaaataaaa aatcataaaa attttgactt aaagaataaa ccaaaataag
    12661 caaaattgcg cctaaaattt cattgattaa caaagaaata ggcaaatgac atttacaagt
//
LOCUS       DARATF010000049        12335 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.049, whole genome shotgun sequence.
ACCESSION   DARATF010000049 DARATF010000000
VERSION     DARATF010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12335
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.049"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            65..904
                     /locus_tag="SB502_001090"
     CDS             65..904
                     /locus_tag="SB502_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0434541.1"
                     /translation="MKKILLSVLTTFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIG
                     VFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            945..2192
                     /locus_tag="SB502_001091"
     CDS             945..2192
                     /locus_tag="SB502_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434542.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFIKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYRICFIFSIAFIIFGVLFSFYDENFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFIVNAFYKEYLGIYLAIVGSCS
                     LLCVFLLKRVFVRSKIKELSIVF"
     gene            complement(2175..3443)
                     /locus_tag="SB502_001092"
     CDS             complement(2175..3443)
                     /locus_tag="SB502_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEG0434543.1"
                     /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYGKDKGFKVSVDKA
                     GNIHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFENLECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEA
                     SLSFNTLRKKGKIYELCAQNFKGGHSGINIIRNEKSSIKEMAKFIQENEGEIISFEGG
                     ERINSIPKHAKALVHFKDEVKSNDWIKCEFKEENEFEICDQSKKLLSLINSFTHGVRA
                     YDENLDIVQTSINLATLRMQDNQIKFALFARSNILDGLKQVEFETLEFFKAFDFKVRS
                     FNFYPPWEGKPNALSDMVFKALKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEIASVEKISKVVFEVLKDNA"
     gene            3511..4038
                     /locus_tag="SB502_001093"
     CDS             3511..4038
                     /locus_tag="SB502_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEG0434544.1"
                     /translation="MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSF
                     EGKVVRIIDGDTIEVNHENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEII
                     YKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYTKEQENAKKNHLGLWKE
                     SNPIEPYKWRKHNKF"
     gene            4047..4220
                     /locus_tag="SB502_001094"
     CDS             4047..4220
                     /locus_tag="SB502_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434545.1"
                     /translation="MKKYTLMVLLALGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(4221..4799)
                     /locus_tag="SB502_001095"
     CDS             complement(4221..4799)
                     /locus_tag="SB502_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434546.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEVKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(4872..5762)
                     /gene="cmoB"
                     /locus_tag="SB502_001096"
     CDS             complement(4872..5762)
                     /gene="cmoB"
                     /locus_tag="SB502_001096"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HEG0434547.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYAKIQELKALNLACNFSLDDSVNL
                     STNSQAKDEILAIAKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIKYELLGVEDLPSY
                     GLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYIRIKI"
     gene            complement(5845..7570)
                     /locus_tag="SB502_001097"
                     /pseudo
     CDS             complement(5845..7570)
                     /locus_tag="SB502_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(7628..7768)
                     /locus_tag="SB502_001098"
                     /pseudo
     CDS             complement(7628..7768)
                     /locus_tag="SB502_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344369.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8033..8357)
                     /locus_tag="SB502_001099"
                     /pseudo
     CDS             complement(8033..8357)
                     /locus_tag="SB502_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344367.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8359..8889)
                     /locus_tag="SB502_001100"
     CDS             complement(8359..8889)
                     /locus_tag="SB502_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HEG0434548.1"
                     /translation="MVGKYVTEYDSNNNHGRYFFTSTIEKPAYLYVYSPNDFFTSLAV
                     NGPSMTGATKSLVGTGAIKNRENYKETSDLITKDNISNEVLNSIFNDLKFNSSVDISD
                     LSKFYKNGKILTADELTSINQSMDFITALYGQTQDSNNATFANALKEVLGNSYGDLGK
                     ANQVIIKTKEILSQNS"
     gene            complement(9010..9349)
                     /locus_tag="SB502_001101"
                     /pseudo
     CDS             complement(9010..9349)
                     /locus_tag="SB502_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872973.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutination protein"
     gene            complement(9712..11724)
                     /locus_tag="SB502_001102"
                     /pseudo
     CDS             complement(9712..11724)
                     /locus_tag="SB502_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853402.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12152..>12335
                     /locus_tag="SB502_001103"
     CDS             12152..>12335
                     /locus_tag="SB502_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEG0434549.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDAS
                     KGHFLLTKANCNFLKPA"
BASE COUNT         3900 a         1815 c         1909 g         4711 t
ORIGIN      
        1 taactttgca attattatat atttttgcaa cagctttaag cttattttta aagaaaggaa
       61 atgtatgaaa aaaatacttc taagtgtttt aacgaccttt gttgcagtag tattggctgc
      121 ttgtggagga aattctgact ctaaaacttt aaattctctt gataagatca agcaaaatgg
      181 agttgttagg attggggtat ttggcgataa accacctttt ggttatgtag atgaaaaagg
      241 aaacaatcaa ggctatgata tagctttagc taaacgcata gcaaaagaac tttttggcga
      301 tgaaaataag gtgcaatttg ttcttgttga agctgcaaat agggttgagt ttttaaaatc
      361 aaataaagta gatattattt tggctaattt tactcaaact ccgcaaaggg cagaacaggt
      421 tgatttttgc ttgccttata tgaaggtagc tttaggcgta gctgtaccaa aggatagtaa
      481 tataactagc gtagaagatt taaaagataa aaccttgctt ttaaacaaag gtacaacagc
      541 agatgcttat tttacgcaaa attatcctaa tattaaaact ttaaaatatg atcaaaatac
      601 cgaaaccttt gccgctttga tggataaaag aggcgatgct ttaagtcatg ataatacctt
      661 gctttttgct tgggtgaaag atcatcctga ttttaaaatg ggtatcaaag agttaggtaa
      721 caaagatgtt atcgcaccag cggttaaaaa aggcgataaa gaacttaaag aatttatcga
      781 taatttgatc attaaactag gccaagagca gttttttcac aaggcttatg atgaaacttt
      841 aaaagctcat tttggagatg atgttaaggc tgatgatgta gtgattgaag gtggaaaaat
      901 ttaataaagg gctttttgcc ctttatattg atttaggata aaatatgcaa aaaaaataca
      961 aaaatattat ttatgcttct ttgggtggaa ttttagaatt ttatgatttt gtgctttttg
     1021 cctttttttt ggatattttt gctaaggtat tctttccgca aaatgatgct ttttggatgc
     1081 agataaatgc ttatatagcc tttggtgctg cttatttagc gcgtcctttt ggttctattg
     1141 tgatggcaca ttttgctgat agatatggaa gaaagaatat tttttatatt tctatgcttt
     1201 tgatggtttt gcctagtttt gctttagctt ttttgccaag ttatgaaagt ataggtatat
     1261 ttgctacttt gattttattt actatacgca ttttgcaagg tttagccgtt ggaactgagg
     1321 tgagcggagc ttggatttat gtgagcgaat ttgtcaaagg gcgtcaaatt cctttagctc
     1381 ttggttttat ttcagcgact ttaaccatag gtttattgct aggaaatatt gccactttag
     1441 gcataagatc ttattttacc ccagaagaag ttcaaagcta tgcttggaga attcctttta
     1501 tcataggagg attttttgga attttagctt tgtttttaag aaataaactc agcgaaactc
     1561 cagaatttat aaaagttcaa aatgaaaaga aaattttaag ttttccattg ttcgaagctt
     1621 taaaaactca taaaatgagt atgcttgttt gttttttaat gaccatggtt ttaacaagcg
     1681 gtgtggcaac tttgatgatt ttacctaagt attttgaaag tcttttagct atgagtaaaa
     1741 cttctgcttt atgggtgcaa aattttgcta ttttagcggt gatttttgga gctttatttc
     1801 aaggtttttt agcaagcaaa tggggaagct ataggatttg ttttattttt agtatagctt
     1861 ttattatttt tggtgtgctt tttagttttt atgatgagaa ttttttattt tattttttac
     1921 tggcttgttt tgcacaaggt attattactt tcgcgcctgt ttttatgacg caaattttta
     1981 aaagtgaact gaaatttagc gggcttagtt ttgcttataa tatttcttat gcgattttag
     2041 gttttttaac cccttttata gttaatgctt tttataaaga gtatttgggt atttatcttg
     2101 ctatagtggg atcttgttcc ttgctttgcg tgtttttgtt aaaacgcgtt tttgtaagaa
     2161 gcaagattaa agaattaagc attgtctttt aaaacttcaa aaacaacctt agatattttt
     2221 tcaactgaag cgatttcaca atgctcatca gttgaatgag gattatggat atttgggcct
     2281 atagaagcgc ataaaagctc ttgttttttc tctataatgc cacactcaag ccctgcatgg
     2341 atagctgaaa ctttggcatt aggcgatact tttttaagcg ctttaaaaac catgtcgcta
     2401 agtgcgtttg gtttgccttc ccaaggtgga tagaaattaa aacttcttac tttaaaatca
     2461 aaagccttga aaaattctaa agtttcaaat tctacttgct taagtccatc aagtatatta
     2521 gatcttgcaa aaagtgcgaa tttgatttgg ttatcttgca ttcttaaagt agctaggtta
     2581 atgcttgttt gaactatatc tagattttca tcataagctc taactccatg agtgaaagaa
     2641 tttataaggc ttaaaagttt tttactttga tcgcaaattt caaattcatt ttcttcttta
     2701 aattcgcatt ttatccagtc gttgctcttt acttcatctt taaaatgcac taaagctttg
     2761 gcgtgtttag gtatagaatt gattctttct ccgccttcaa aagaaatgat ttctccttca
     2821 ttctcttgta tgaatttagc catttctttg atggaacttt tttcattgcg tatgatattt
     2881 atgcctgagt gtccaccttt aaaattttgc gcacaaagct cataaatttt accctttttt
     2941 ctaagggtat taaaagacaa acttgcttct atatctactc cacctgcaca gcctatcatg
     3001 atctcatcat cgctttcatg atctaaattt aaaagcattt tagattctaa agtgtgctcg
     3061 agtgaattca ctcccatgag tcctacttct tcatcgtttg taaaaagaca ttctaaattt
     3121 tcaaattcag ccatagcact catcatgatg gctataccta tgccattatc tgcaccaaga
     3181 cttgaatttt tggctcttaa aaagccattt tcttcataaa cttctaagtt tggtgcatcg
     3241 cccatacaga ccatatcata atggctttgt agacaaattt ttggtttgcc ttttatggca
     3301 tggatatttc ctgccttatc tacactcacc ttaaagcctt tatctttgcc gtaagagctt
     3361 aaaaattctt tcatttgttc tgtttcataa ctgcaatgag gaattttgca taattgttta
     3421 aaattttcta taacattttg cattttatct cctttgtttt gataaaatta tggcatattt
     3481 tttaaaattt aaaggcaaaa tgattaaaaa atgagaataa attataaaaa attatttaat
     3541 ctaagaaaat tattaagtga tccaaaaaaa cttttttctg tattaatctt cactcttgta
     3601 gttgttttta tccagaacta tattgcccaa aattctagtt ttgaaggaaa agtagttaga
     3661 attattgatg gagatactat agaagttaat catgaaaaca aactcgctag aataagattt
     3721 tttggtatag atgcaccaga acttaaacaa agttttggaa agcagtcaaa agaagcttta
     3781 agtagaattt taagtggcaa acaagttgaa attatttata aaaataaaga tacttatggt
     3841 agaattgttg ctattgtaaa gcttaatgat gttgatatta atcgattttt ggtaagcaaa
     3901 ggctatgctt gggctgatac ttactatagt aacgcttata ccaaagaaca agaaaatgct
     3961 aagaaaaatc atttaggtct ttggaaagag agtaatccta tagagcctta taaatggaga
     4021 aaacacaata aattctaagg aaaaacatga aaaaatatac tttaatggtg ctattagctt
     4081 taggaatttc tggatgtttt gtaaatgaaa gagggatttc aaatcgtttt tatgatgatt
     4141 gtaaagagta ttatgatgga agtggaactt atcataagga ttgcccaaaa aattgggtag
     4201 atattaaaat gactccttga ttattttcca cccacagagg ccattaatgc agctgctaca
     4261 gcttctggat tgttgatttt ggcaccttgt tcttgatttt ctgtaggttt aacagtgtta
     4321 agtggcggac gcttgagttt aaatatatgc tcatcggtgc taacaacttg tatcgttcct
     4381 tcaaacattt taacttcttt aacatgtcca accactttta catctctttt tttggaggtt
     4441 tcgtcaaaaa gtgcatgagc ttcaagttct aaaacatcgc ctaatttaag cggagcataa
     4501 aaaaaacatt ttgatccaat aatcactgaa aattctttat tgatagaggc ttgtgctaca
     4561 tagtttgccg cagcgaaaat aaaggcatca aaaatcaatc cttgatcatc tgctaccatt
     4621 tcgcttgtgg ttattaaaat tgatttggca tagtttttat caatttctat aatggttcca
     4681 gcaagagagg tgtttaattc aggacaagtg agtaattctg ctctaacgcg agatatatct
     4741 tctgcagatg cgtattcttc aagttgtgca tattcttcaa aattatcttt ttttgccata
     4801 tctaaccttt aaattctact tatctacttc aaaatatcta attttcaata tcggtaaaaa
     4861 ataaaaagaa tttatatttt aatgcgtata taaactcttt tgggtgcttc atagccttca
     4921 atggtaagat ttttatcctt tggatctaag aaattttcca gcgaaaaaga gtctatccat
     4981 tctgtttttc tttgttcgtt ttcatcggtt ttttttgtag ctaaaacttc aaattcttta
     5041 aatcctgctc tttcacacca gttttttaat gcactaatgc ttggtacaaa ataaatattt
     5101 ggaattttag aataagtttt attaggcaca agagcgattt ctctctcatc ttctatatac
     5161 atggtatcta aaaaaacaac tccattttta ttaagtcctg cttttaaatc ttttagcatt
     5221 tttataggat cacttctatg ataaatcacc ccaagacaga aaatcacatc aaatttcaag
     5281 ccatagcttg gaagatcttc tacgcctaaa agttcgtatt ttataggagt tttagctaaa
     5341 gcgttaatga gttcaaattg caaacggtat ttgatagaag gatcaaaacc tatgagtttt
     5401 gcaggattaa attcaagcat tttaaacata taataaccat tattacagcc tatatcagca
     5461 acgcattttt gagaaatttc gttcatgaaa ggctttagaa tgttgaattt aataaaactt
     5521 tgccattctg tatcgatgaa aagatcgtct attttaaaag gaccttttct ccatggttta
     5581 agttcttttg ctatagctaa gatttcatct ttggcttgag aatttgtaga taaatttaca
     5641 ctatcatcta aagaaaaatt acaagcaaga ttgagagctt taagttcttg aattttagcg
     5701 tataaagggt gatttagaaa ttgtttttca agtaaatttt cttgcatttt tatccttgac
     5761 atttgctttt aatgctaaat tataacatta aaagctttta tggcaatata aattatatgc
     5821 attaaatatt tgatcaaaaa taactcaaaa atactttcta aagattacat aagctttaga
     5881 actataatca tcatctagtt tatatttctt taaagctcta gctaaatcaa gcttgacata
     5941 aaaattccct gttttattat aaagcagttg taaaccataa gcatccatat agtttgtttc
     6001 acttgctcta tatagtttag aatcattctc ataccaagaa taacctatat cataaaaagg
     6061 agtgatataa aaatctttta aaggagtagc cattctaagt ccaaagctag ccactacagc
     6121 attatctcct tctccatctc cattattata agcccttact ccataaggat ctcctaaaga
     6181 tatagtttca ctactatcta atgtagctcc attgacaact tgttgataat ttaaactaaa
     6241 aagatgagta aaagtatcat taaagaaata agcattgtta agattgacat tgagtttagc
     6301 aaattttcca aagccatctc catctgtttt agaactcatt cctaatatag tagttccccc
     6361 atctttaaca ttaccatagc ttacattagc actataagaa aaactatcat tactaatgcc
     6421 attataaact ccttctatac caaagcttat cgtatcagag cttttatcta tagtcatgat
     6481 atttaatctt gaattactaa gctttttatg ataataactt gaagttaaat aaaaagaatt
     6541 ataagtcgta atccccaaag gatattttaa atctatacct agattttcag aagttcctat
     6601 aaagtttgca tttttataag ctcctcctaa agcatagttt cttttagaat aacttggagt
     6661 gatttttaaa ttccctaaga aagtagtata gcttatacca tagttagttt gtgcttcatc
     6721 gcttctttgc aaataagcat taagactatc tccttgatga gctatgttat taaaactcat
     6781 actagcacca cccctattat ctgcctgatt cttttatacc gtaattatcc ccataaaaca
     6841 atacagaaac gaagctatca ctaggggtag tttctatcac tatatctgtg tcacctggat
     6901 tatctcctgc ttttaaagaa gcaagagttt gtatcccata catttcattg actttataaa
     6961 ccgcatcttc tactaattta gtagtgatga tttcaccttt atgattaggt aatttgcttt
     7021 ctatagcata atctcttaca ctagaattgt tttgaaccac atatttacct aaaacaccta
     7081 aggtgatatt gatttgaatt tgatctttta gttcttgttg tgggatataa gctgtagcag
     7141 caggataacc actagcttga acataataag aaataatatt ggctatatct tgtaagtctt
     7201 gaactgaaat actttctttt ttgtaatcgt ttaaggcttc ttgtaaaact tgctcatcta
     7261 aacctagatc tttaaagttt atgtttttat tggtaatatg aaagttaaag ctaactttat
     7321 gaattgattc ttctttagaa gtatttttta aagaaggagt gtttgaattt ggggttttag
     7381 tttttaaagt attatcatta gacaagttag gttgattttt ttgagtgttt ttctttgtgt
     7441 tagtggtttt tgaattatta ttatcactag tattagaatg atctatgata atcactccat
     7501 cttttacttt taaagtgtta ttgtagtttt ttaagttagc atcttcttta taaggagatt
     7561 gttctaacat ttgtatggtt ttttattatc tttaatatca ctagcataaa ggcttaagat
     7621 agctaaacta gatagtaaga taatgcgttt catttaaatt ttccttagtg tttgtttgat
     7681 ttttaatctt taaactttgt ttgttttatt aatttttaac aagatccaaa aggcttttaa
     7741 ccttttggat tttaatcatc ttgagcaagg gtttcctgct ttaaaattat ccgatactat
     7801 acaacattac cactttcttg agtgctggct tcatctatac ttgcttgttt atcatcttca
     7861 ttgatatttg gatcttcatc tgtagtttgc ataagcaaag ctgtagtaat gtcaggttct
     7921 tgttgtccta tggtatcatt tgggttatta ttagaaccgt tgttgttacc attgttaata
     7981 tcacctgaat cggttccatc gtttccgttg ttggagttgt tggatcctga atttataatg
     8041 gatactggct tatagtttgc actatatttt ccattgactg taagatgact agttccattt
     8101 atgctcgcac ttgctaaagt tttattagaa ttttctaaac tagaattagt actcgctgta
     8161 gcgatttgaa gagctattgt agcttgttat aaatcactag aaactttatc tacagcttgt
     8221 tttaaacctg caataacttt atcgccatta ttacctgtta taccacttag agctgtattg
     8281 taagctttaa ctgcttcatt ataagcattt acagcagtat cgtaagtttt ttgagcgttt
     8341 tcttgccctt cggtcatttt aggaattttg agaaagaatt tcctttgttt taataatgac
     8401 ttgattagct tttcctagat caccataaga atttcccaat acttccttta aagcgtttgc
     8461 aaatgttgca ttattactat cttgagtttg tccatataaa gcagtaataa aatccatact
     8521 ttgattaatg cttgttaatt catcagctgt taatattttt ccatttttat aaaatttact
     8581 taagtcgcta atatcaacac tagaattaaa tttcaagtca ttaaatatag aatttaaaac
     8641 ttcatttgag atgttatctt tagtaataag atcgctagtt tctttatagt tttcacgatt
     8701 ttttatcgct cctgttccaa ctaaagattt tgtagcacct gtcatagatg gtccatttac
     8761 tgctaaagat gtaaaaaaat cattagggct gtaaacatac aaataagccg gtttttctat
     8821 tgtgcttgta aaaaaatatc taccatgatt attattagaa tcatattccg taacatattt
     8881 tcccaccata gcaatccctt ctcgtactgt catagtttct aaatttataa catttcctgc
     8941 attggattta attacaggtg atattgtttt aggatctcct tcaaatgctg aaggttttcc
     9001 atcttttaca aactccttca tccccttatc ctctattgat gaagcagaca gaataatttt
     9061 ttttgcatta atacttccac cattgagtgt tccatctata atgagagctt ttagaaccat
     9121 aggcaatatt taaataattt tggttagttt ttccttgtcc aaaatttaca gtttcaccac
     9181 ttgctatatt aaaaccacca ccccattgga taacagagtt tgttttactt cctgagatat
     9241 tcatagtgcc accactaaca cttatacttc cacttgttcc atgagtgaac ttacccccac
     9301 ttggtaaagc atagctttgt gtaaaaagaa agaacctaca actaaagata aagaaagttt
     9361 atttaacttt ttcatgactt gctccttttt gtaagattaa gatttaagaa tcttttgttt
     9421 atatttataa aaatacaaat aaatcattcc tatctttaag ataggaatga tttattttat
     9481 ccttgcgtaa atgcttttgc catcttgaga tattcttgct tcataagaaa gcttttataa
     9541 attcatattt tttaatctat ctatagaact tagtttaaaa tcttctttgt ttttttgcat
     9601 tttttcaata aagctttgaa gttcttcttg atttaaagta ttagagtttt catctataaa
     9661 accttgctca ctttgtaaga ttaagatttc tttattttta aggtaggggt attactcttt
     9721 gagggtataa agagccaata ctccctcgct agaaatatta ataggagcat cgtatgactt
     9781 caaaaagggg agttgtgttg attttattgg atacaataag ataataatgc tcaaagttat
     9841 taataattct agcttcaact ttagtattta aaatcagtct attgttttta cttaaactga
     9901 tatctgaagg agctatagca ttagaagtac tataattatc ttcataatgt actaaggctc
     9961 ctgctaatat atctatgaaa gtgtttttaa atatatttaa attcccgcct atataaggta
    10021 ttattataag atttagcttc acttaaacct gtaatggccg aaggagctat aaaaacagaa
    10081 ttgttatttt tatactcatc aagattgaga ttgtttatga ttaaggtatt atcatggcca
    10141 ttgtttgaaa gtccagctat aatacttaaa attccttctc ttttatctga agctacacca
    10201 aataaagtat cattgataat gattttatta taagcagctt cattataagc cataatcaaa
    10261 taagcattat cagctgcatt agaagaatag ttttttatat ctatggtatt atgattggct
    10321 ttatctaaag ctcttatgat gattttagaa cctttatcta tattacttgc atcagtaatg
    10381 ctttgaacat tgttataatt tatagtatta taagaagctt ctttggcttc tgttaataca
    10441 gttagatttc taaaagaagc aaaatcttta atcgatactt tattgttatt agcactacta
    10501 ggataaaagt cttgattatt aagaaggttt ttcttagctg tataaatgta tacaggtaag
    10561 gttgacatag aattattaat ataaacttta ttataatccg cattgccttc caaggttcta
    10621 ccagctacaa tatttaaagc atctttatag ctttgagaaa gatcggttgt ggtaagatcg
    10681 tttttaatgt taatggtatt atgattaact cctttagttg caaagtcacc ataaaaagaa
    10741 tgttggttat aacctaagaa gttattagcg atttctaaag gatgttttaa ttctatgttt
    10801 aaggtattat aatttacttc tccattatta taagctcctg cgtagaagtt aaacaaagct
    10861 tgagcaaaaa tgttctcatt gtttttattt ttttaggttt ttaatatctt ttaatattga
    10921 tagtattatc taaggcttgt ccttgttcgg tttttccacc caaaaaatca gcaaataaaa
    10981 cagaattata agctaagggt tgtttatcat ggttcatata catatcaaga ttaaaactat
    11041 ctatgtctaa aaggttttta ctggcttgaa aatttttatc tgattcgcta tctatataac
    11101 ctgcgctaat atgagcagca gctaaactag cataagcttt acttggacca tggataatca
    11161 tattagcatc tttgataaag attttattgt tttttacatt accttgataa gctaaaccac
    11221 ctacaaggtg agtgattctt tcatcaaagg tattattacc atttttatct tttttaggca
    11281 aggaagtaaa aaactctaca ctgctacctg cttttatatt taaactatta tttgtagaat
    11341 ctccataagt ggctatagct ccgattaaat aaggagaacc atttaaggct aaatcataag
    11401 tgttctcaac tcccatacta atatgggcat ctttttgaag tatggtttgg ttatagcttg
    11461 cattactata atgagtaaag gtagaactca ttaagaaatt catgcgttga ttgcttttag
    11521 aattactagg gtttttatat gagtatcttt aggtttaaga taaaaaactg aactaagttc
    11581 tccttgttct aatataagtt tgttataact tgcatcagca tgatcggttt ttgctgtgat
    11641 tacactctaa ctgtttttta tactacgatc ggctgtatta acaccatgcc ttgctttaaa
    11701 agaaagaact tcatcttctc tcatatcagg agtaagtaaa taatgtttaa aatttaaatc
    11761 gtttatattt gtaatatttg gtttatgatt gttaaatatt gttaatatat tgtttagaac
    11821 tcttagcata ataatttata ccttggaatt ttttataagt agaattggtt ttatcataaa
    11881 gttcgttatc attaaaataa tgctttggaa tattgaaatt tcgattgtct gtagtatttg
    11941 cttgagtggc tgcaaaagcg ttgatgctta agaaggtaac aatggaaagt ttaaaacaaa
    12001 atttctctat accccctccc agtgaagtta aaaagcttta ttaaattaag attggacgga
    12061 atttttaata taaactaaaa agcgatatca aagaatttcc gttgtataat ctaatgtttt
    12121 ttaaatgtga aatatttttt aaggtaaagc gatgaaaatg cgtgtgtatt atgaagatac
    12181 tgatgcgggt ggagtggtgt atcatagtaa ttatttaaaa ttttgcgaga gagtaagaag
    12241 tgaaattttt ttcaataaaa aagtagatat ttttgatgcg tctaagggac attttttact
    12301 tacaaaagca aattgcaatt tcttaaaacc tgcaa
//
LOCUS       DARATF010000050        12036 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.050, whole genome shotgun sequence.
ACCESSION   DARATF010000050 DARATF010000000
VERSION     DARATF010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12036
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.050"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            137..1180
                     /locus_tag="SB502_001104"
     CDS             137..1180
                     /locus_tag="SB502_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0434550.1"
                     /translation="MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNVLNNYPKLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
     gene            complement(1204..2553)
                     /locus_tag="SB502_001105"
     CDS             complement(1204..2553)
                     /locus_tag="SB502_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEG0434551.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISAALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYTKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLIQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKNTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            2656..3858
                     /locus_tag="SB502_001106"
     CDS             2656..3858
                     /locus_tag="SB502_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEG0434552.1"
                     /translation="MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCMIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLANAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKDKK"
     gene            3855..4556
                     /locus_tag="SB502_001107"
     CDS             3855..4556
                     /locus_tag="SB502_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEG0434553.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLKEQGVKEDEISYNSPNIID
                     RLSDPYGNDTQATYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDNYDIEY
                     LYTKLNEIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(4586..6724)
                     /locus_tag="SB502_001108"
     CDS             complement(4586..6724)
                     /locus_tag="SB502_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEG0434554.1"
                     /translation="MKRNTCEIELEIPNSGIFTISLENENLIISLDLAKFEYKKKLNA
                     GGLAKPLHPYIIYEVLEKNNKNTFNDVKIIDKIEDENNIIYHFNFGLILNTFIGENKD
                     NKDKEALKALSFMQNFIPACFFSYQIIGDSKAIPKNVLEDLKNRYGYEGKNYKSIFKK
                     EVYINCNCLERLNFSHCEFESKVSLRFLKDNKYKEFHNGVNFSNCIFKNEVDFSYFVS
                     GAPLPNNKYYNNAQNTLFKDCIFENKVDFHNSKITNNIYFNNAHFKDYVDFHECEFEK
                     TASFYGVRFDKAPNFSACYFKEPKAVNLINVDIDKLDFKSLEQYIKDKYQDETYENKQ
                     ELTEEQRNNNCKLKCAKHLKDSFRVIKDVLITQNNTLEAQEWHKLELYAKEKENHINL
                     NVKEREKNTDIFKNILIWFNCVLLNVYRNTSDHHNDFLKILNFTIGMIALYGVFFYLL
                     LEVYMYLDIIFIESFFRFKIIDYIYLCLFVFLTIIMFLYKNKKSIFTKSILFLTIYIT
                     FYIVYIKILNFINITYFREWFFYLLCYIIGIYIFYLAFIFISKFKFINFILKLCIYLA
                     FLSIWILSSNFINPFTGVFSSDKLYESQFEKSLNDLNTSAIINLASILQNDFNLHLKD
                     QNISFTELNSAKASIIANKENLLKLNDVNSNIAKEVLGEKYTELLKTINQDKIIENII
                     KSTSVLYGIILLLCIFSLQKTARKNSIVPS"
     gene            complement(6724..10488)
                     /locus_tag="SB502_001109"
     CDS             complement(6724..10488)
                     /locus_tag="SB502_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEG0434555.1"
                     /translation="MHFTLLNEKDFFNPYYRKKQIMQNEFDIFSKALMQYLERLESSQ
                     SENEDYLVANALSPFLTMLNFKTHIKTKQKGKSEIDLSISKDEFSKDLEVLIEAKKPN
                     SKEFITHTKVNSKALHETILYYFRNREYSFSLKFIIITDFYKFYIFKISEFEELFYKN
                     PSFKKLFEEFCNPNSLFKGNTEEFYKEVAKLIENSKENLKGFLIDLTFLKDKQKSNFK
                     NLASIYKTFHRDFLLSEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESK
                     EEQGTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFK
                     KIPDFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISSLSNDLK
                     LFYYKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVLG
                     NVFEKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLNAKDISELRKSLRKE
                     DKKAQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILIT
                     GRKGEFIEYKRPSTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNSCEITKLRLWIE
                     LLKHSFYQSFDDENYHDLKTLPNIDINIKCGNSLVSYFETGKSLNHYPNIKERINKYK
                     RIVKDYKEGFYTDKSHINQEIKNLKISFKNFCFADKFKKEMKSFNDKCEKYSKKYGNF
                     LAVDDENLKFFVSANLTLFDFDEKEATKEFANLKKEYDNIFNLESNHPFEWRFEFPEI
                     LDDDGNFKGFDLIIGNPPYIRQEELKELKSHLAKNYKVYKGTSDIYTYFYELGFNVLK
                     DRGGVLSYITSNKYTRAGYGEALREFLLKNVKFLEYTDLNGIKVFDSATVDTSILCFE
                     KSKSKDNKFKYLALSNEILKTCAYNIGLYKDFAEFSQNSLSKESFTFSDENTSALKAK
                     IERIGTPLKEWQGLNIYRGILTGYNEAFIITTEKRNEILANCKDEAEKERTAKLIRKM
                     LRGRDIKRYSYEWAGLWVIFIPWHFPNVEKPKTMLENEQDLKEQYPSLYKHLLSHKER
                     LSKRNKEETGIRYEWYCLQRWGANYYQEFEREKIVWASVGYIEHSFIPKDMLLQDTNY
                     FFSTSNRYLLGILNSKPITYYLADIQTPLGNTGAFRNYKYNIEKLPIPKINSKNQNIV
                     DELINLVDEILKAKEQDKNANTQELENKINSLVYKLYNLNEEEIKIIEGK"
     gene            complement(10549..11946)
                     /locus_tag="SB502_001110"
     CDS             complement(10549..11946)
                     /locus_tag="SB502_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEG0434556.1"
                     /translation="MEKFIERLLEEDIKFEKDVNNGLSDINIFDALNIETKENYHSKF
                     IAYLIDINKDHYQKNFAKVFLEKLGKSLVNTKFENLNIEDIKSVETEACIKDNRRIDI
                     LITLSDKRYIIIENKIYAKDQKNQLKDYINFVRKNIKNIKDCYKNILTIYLHQDECAS
                     PSDYSLGNFTIKTNLIKDKNENNVSYYLKMDYIWIKEWIDECIKIYEEKSIKDQKFIL
                     DIQNIIFTLNQYKSILQWYMTDEYTQRDDVLEFIFQNNIKMQNLKNAMILYRYNKNKS
                     ELKNLNEENYKKAKDIIQHKWSNICEYIIEEFFDSFEHKEIKIGDITFIGNKIEENRV
                     NHGVFIFYPIDYKNESIYPCLYIYFKKNYYDIIGLTFEISNDDEEDIENEKYKECLKL
                     FKDVKEENVRKYQNHYYCDKLINNEKLEGEYAFIYWLIENQNSKKDFIQILNDFFIKK
                     PIQEAYKGINDILNS"
BASE COUNT         3849 a         1849 c         1618 g         4720 t
ORIGIN      
        1 ttatatactt taaatatata ttacttttag taacacttta aaatttaatt ttatttaaat
       61 tattcttatt atgcttaata tttaagaaaa aatacactaa aatcaatttg aactgcaaat
      121 aaaaaggagg aaaatcatga aaaaacacat tttattgctt ggtttatgtc ttagtttgag
      181 tcttagtgct aaaagcgtga gtgattacaa agtaggagaa gaattaagcg acaaggaagg
      241 agtagagtat tttaaggaac tttccaaaag acctgtgcaa gaatggccaa ataaaaattt
      301 aagcatcaat gatgttccaa aaggtaagca aggggattta atccgttatg gcatagagct
      361 tttaagcaag acagaaagta ctctaggacc ctatagcaag ctaaaaaaga caagcaacga
      421 agtaaactgt atttcctgtc acatggacaa tgacggcaat ggtttaccag ggacaaaaaa
      481 atatgttatt ccatttttaa atgtcctaaa caattatcca aaacttgata tagaaacgat
      541 gaaaatcatc tctgttgaag atagaattcg cggaatgggt ggaactgact ctcatagatt
      601 tcctaatgat tctaaagaaa tgaaagcaat tttagcttat tttaaatggc taaaagaagc
      661 ttatggcatc aaagacggcg taaagcttga aggagatttt ttcgctaaga tgaattttcc
      721 aaatcgccca gctgaccctg tgcgtggaaa aaaactcttt gaagaaaatt gcgttgcttg
      781 ccatggcgaa agaggacttg gggtaaaaaa tgataattac gaacaaggta gcggacattt
      841 atatccatct ttacttatct atcctgatgg tggacacatg gctatgatac catttttagc
      901 aagattttta aaatcagcca tgccttttgg tgcgagtgcg gataatccta tattaagcga
      961 tgaagatgca ctggatatag cagcttatgt caatacaggt tttgtaagaa tgcctataac
     1021 cactacagaa aatcgtgcag gacttgatac agcttatagc aaatccccat cattaaaacc
     1081 tgagtatttt gcttcaccac aacaaaattt agaccctaaa gaatacataa aagtaaaata
     1141 cggaccttgg aaaaatccaa atcacttccc aggagaatga ttaattttgg gcttagccca
     1201 aaattaatcc tcatcttttg ctaaattttc aagactttta atcccttctt cgcctatcaa
     1261 atttccacct tgtaagtcgc taaatatcgc gtttaaagaa ctcactatgg cagtggaatt
     1321 aaaacttaga ttttctatag ctctttctct ttttttccat atattttgca aagccctttt
     1381 ttcagcttct aactcttctt tcatattttg gtaagttttg agtataaaag tgatttgcgt
     1441 gttaaattcc ttggaattta agtattcgta taaaatgtga tttttttcat ctttgttttg
     1501 cagggcattt ttgagtttat aagcgtttat aatgctttct ctaagcactg ctaaaacacc
     1561 tttgaattca ttaaaagtac agatcaaaat tccttcttta aaatgcgttt tttctttatc
     1621 ttttggcata gtttttgtaa tcaaaaccgc tatatcactt tttgcagcta tgctgtctag
     1681 tttaagttta tcaagccatt ctttgttaaa ttctttagtg cgtttgctct catataaaat
     1741 acttccgcaa atatttccaa aattatcctt tactatatgc agacaatcgg ctccatttac
     1801 gccttttggc acttctttta cttcatcgct taaatactca ctttgtatgt attcttctat
     1861 gagtagttcg gctgcttcgc cttggagttg ctgtgagcct tgttctatcc tgcgttgtgc
     1921 gtcttctagc ttttgagcta cacttttaaa attcgtttct agttctttgt acttaagatc
     1981 ttgttcttga gtattttttt gaaattcaag acgcattttt tctctttcaa attccaaatt
     2041 tttgctttct tgttctttaa attctttaaa agcctcttct ttggcttgaa atttcaatct
     2101 ttcttcattt tctttttgct ctctttttag cctttcattt tcagccttta tgcttaaaaa
     2161 ctcgctaagc tctttgcttt ttttctcgag ttcttcttgc atgattttca tttcattttc
     2221 atgctctttg ttaaatttct cgctgaattc tttttggaaa ttttgctttt gtataagaag
     2281 ttcttgttca aatttttgct tttctaaaag aagcttttgg cttacttgct cgtttatgag
     2341 tttttcttgt tctatctttt gagtttttaa atcatttaaa gctttggtat attcagctct
     2401 tttagcattt acctcatcat caaattcttt tttttgtttt agcatttctt gcttagcttt
     2461 atctaaaatt tgagcatata aagcagcgct gatatcgata aaacttccac aacttgggca
     2521 tttgatttgt tcattttggt ttaaattttg cataaaattt ccttagaatt tttccctaaa
     2581 tttaacatag aaaaacaaag attattctaa gattgacttg ttaaaatcat tcttttagaa
     2641 taattaggat tacaaatgca aaaacacacc aaaattcacg gctttgctaa atttaaactc
     2701 atcgttatcc ttgctttgat gtcaagcata gcaccacttt ctacagatat gtatttgcct
     2761 gcactttctc atgtggagca aagttttcaa actaattctt ttttaaccca acttagtatc
     2821 gcaagttttt ttatcgcttt tgctttagga cagcttatat atgggccttt aagtgatatt
     2881 tttgggcgta aaattccagc tttggtgggg atatttttct tcatcgtttc gagtttgttt
     2941 tgtatgatta tcgatgatat ttatgctttt atcgctttga gattttttga agcacttggg
     3001 ggttgtgcag gtgtggttat cgcaagggct attgtcaatg acttgtttga gatcaaagaa
     3061 gctgcaggga tttttgcttt gatgatggtt tttagttctc ttgctcctat gctttcgcca
     3121 acttttgggg gaattttgct agagtatttt tcatggcata gtatttttgc gactttgttt
     3181 gctttgggaa ttttgctttt tttgatgata ctttttggtt taaaagaatc cgcacctcat
     3241 cttaaaaaca aaaaattttc ccatcatgaa gcgatgaaaa gctacaaatt tgttttaagc
     3301 gataaacgct ttttagttta tatactatgt gcttcttttg ctttggcggc gatgtttgct
     3361 tatatcacag gatcaagctt tgtttttacg cagtttttta gcttaagtga gcaaaaattt
     3421 gccttgcttt ttggggcaaa tgctttaggt tttgtcatct gtgcaaatat caatgcgaga
     3481 ttggttttaa aatacgaaag cgaaaaaatt ttggcaaaag ctttgatgat aatgtttata
     3541 tcgactgtga ttttacttgc aaatgccttt tttcacccaa atttcttgct ttttgagctt
     3601 agtattttta caagtatcgc tatgcttggt ttcatcgcac ccaataccac gactttggct
     3661 atggcaaggt ttaaagaaca tagcggaact gcttctgcgg tgcttggaac ggtgcaattt
     3721 ggttttgcag gacttatttc ttttgtggtt ggggctatta acgcaaatac gccgataatc
     3781 cttgcttttg taatgtgtgc ttgcgtattg gttgcaaata tgatatattt tctaatcaaa
     3841 ataaaggata aaaaatgaaa acaaataata tctttatggc tttagccata gttttggcga
     3901 gtttgattct agcttttgga tttaacaagg ctttaagtga ttttaaaact cttgaaagaa
     3961 gtgtaagtgt aaagggttta agccaaaaag aagtcgaagc agatactttg atacttccta
     4021 taaaattcac aagatcaaac aacaatctta caaatttata cgaagaacta gaacaagata
     4081 aagaaaatat catcaaattt ttaaaagaac aaggcgtaaa agaagatgag atcagctaca
     4141 actcgccaaa catcatagat cgtttaagcg atccttatgg caacgacact caagctacat
     4201 accgatacat aggcactgcg aatttactca tctatacgca aaacgtaaaa cttggaaaaa
     4261 gcatactaga aaacatttca agtcttgcaa aatttggcat agtaacgaaa atcgataatt
     4321 atgacataga atacctttac accaagctaa atgagataaa accgcaaatg atagaagaag
     4381 caacgctcaa tgctagaaat gcagcgataa aattcgcaca agattcaaac agccatctag
     4441 gcaagataaa aaaggcttct caaggacaat ttagcatcag caacagagat aaaaacacac
     4501 cttacatcaa aaccataaga gtggtttcta ctatagaata ctacttaaaa gactaatgat
     4561 aaaatttcaa gctaagcttt aaggcttagc ttggcactat ggaatttttt cgtgcggttt
     4621 tttggagcga gaaaatacaa agcaaaagta taatgccata taaaacacta gtggatttta
     4681 tgatgttttc tataatcttg tcttgattta tagtctttaa aagttctgta tatttttctc
     4741 ctaaaacttc cttagctata tttgaattta catcgtttaa ttttaaaaga ttttctttat
     4801 ttgctattat cgatgcctta gctgaattta actctgtaaa agaaatattt tgatctttta
     4861 aatggagatt aaaatcattc tgcaatatgc ttgctagatt tataatagca ctcgtattta
     4921 aatcatttaa acttttttca aattgacttt cataaagctt atctgatgaa aatacacctg
     4981 taaaaggatt tataaaattc gaacttaaaa tccaaataga caaaaatgca agatatatgc
     5041 ataatttaag tataaaatta atgaacttaa attttgaaat gaatataaat gcaagataga
     5101 atatatatat accaataata tagcacaata aataaaaaaa ccattctcta aaatatgtaa
     5161 tattgataaa atttaaaatt ttaatataaa caatataaaa agttatatat attgttaaaa
     5221 ataaaataga ttttgtaaaa atacttttct tatttttata taaaaacata ataatagtta
     5281 aaaatacaaa caaacacaaa tatatataat ctatgatttt aaatctaaaa aaactttcaa
     5341 taaatataat atctaaatac atatatactt ctaacaatag ataaaaaaac actccatata
     5401 aagcaatcat ccctatagta aaattcaaaa tttttaaaaa atcattatga tgatcactag
     5461 tatttctata cacattcaac aaaacacaat taaaccatat taatatattc ttaaatatat
     5521 cagtattttt ttctctttcc ttaacattta gatttatgtg attttctttc tctttcgcat
     5581 aaagttctaa tttatgccat tcttgagctt ctaaggtatt attttgagtg attaaaacat
     5641 cttttatgac tctgaaagaa tcttttaaat gtttggcaca ttttaattta caattattat
     5701 tacgctgttc ttctgttaat tcttgcttat tttcatacgt ctcatcttga tatttatctt
     5761 ttatatattg ttccaatgat ttaaaatcta gcttatctat atcgacattg attaaattta
     5821 cagcttttgg ttctttaaaa taacaagcac tgaaatttgg agctttatca aatctcaccc
     5881 cataaaaact agctgttttt tcaaattcac actcgtgaaa atcaacataa tctttaaagt
     5941 gggcattgtt aaaataaata ttattggtaa ttttagaatt atggaaatca accttattct
     6001 caaaaataca atctttaaat aatgtatttt gtgcattatt atagtattta ttattaggca
     6061 atggtgcacc tgatacaaaa taactgaaat caacttcatt tttaaagata caatttgaaa
     6121 aattaactcc attgtgaaat tctttatatt tattatcttt taaaaaacgc aaagatactt
     6181 tggattcaaa ttcgcaatga gaaaaattta atctttctaa gcaattacaa tttatataaa
     6241 cttctttctt aaaaatactt ttataatttt tcccttcata accatatcta ttttttaaat
     6301 cctcaagaac atttttagga atagctttgg aatctcctat aatttgataa gaaaaaaaac
     6361 aagcaggaat aaaattttgc ataaatgaga gcgcctttag tgcttcttta tctttattgt
     6421 ctttattttc tcctatgaat gtatttaata tcaatccgaa attaaaatga tagataatat
     6481 tattttcatc ttctatttta tctataattt ttacatcatt aaaagtgttt ttattatttt
     6541 tttctaaaac ttcataaatg atatatgggt gcaatggttt agctaatcct ccagcattta
     6601 attttttctt atattcaaac ttagctaaat ctaaagaaat aattaaattt tcattttcta
     6661 aacttattgt aaaaataccg ctatttggta tttctagttc gatttcacat gtatttcttt
     6721 tcattatttc ccttctatga tttttatttc ttcttcgttt aggttgtaaa gtttataaac
     6781 caaagaattg attttatttt ctaactcttg ggtgtttgcg tttttgtctt gctctttggc
     6841 ttttaaaatt tcatcgacta aatttataag ctcatcgact atgttttgat ttttagaatt
     6901 tatttttggt atagggagtt tttctatatt gtatttataa tttctaaatg ctcctgtatt
     6961 acctaatggt gtttggatat cggcaagata atatgtaatt ggctttgaat ttaggattcc
     7021 caataaataa cgattacttg tggaaaaaaa atagtttgta tcttgcaata gcatatcttt
     7081 tggaataaat gaatgttcta tatatccaac actagcccac actatctttt ccctttcaaa
     7141 ttcttgataa taatttgctc cccatctttg caaacaatac cattcataac gaattcctgt
     7201 ttcttcttta tttcttttag ataatctttc tttatgagat aacaagtgct tatataagct
     7261 cggatattgt tcttttaaat cttgttcatt ttctagcatt gtctttggtt tttcaacatt
     7321 tggaaaatgc caaggtataa atatcaccca aagtcccgcc cactcgtaac tatatctttt
     7381 tatatcgcgt ccgcgtagca ttttgcgtat gagtttggcg gtgcgttctt tttcggcttc
     7441 atctttgcaa tttgctaaaa tttcatttct tttttcagtg gtgatgataa aggcttcatt
     7501 atagcctgtt aaaattccac gatatatatt aagtccttgc cattctttaa gcggagttcc
     7561 tatgcgttct atcttagcct ttaaggcact agtattctca tcgctaaaag tgaagctttc
     7621 tttgcttaaa gaattttgcg aaaattctgc aaagtcctta tataagccaa tgttataagc
     7681 acaagttttt aaaatttcat tgcttagggc aaggtatttg aatttattat ctttgctttt
     7741 tgatttttca aaacaaagta tggaagtatc cactgtagca ctatcaaaaa cttttatgcc
     7801 gtttaaatca gtgtattcta aaaacttaac atttttaagc aaaaattcac gcaaagcttc
     7861 cccatatcct gcacgcgtgt atttgttaga agtgatatag ctcaataccc cccccctatc
     7921 ttttaaaaca ttaaatccta gttcataaaa ataagtataa atatcgctcg tgcctttata
     7981 aaccttataa tttttagcta aatgggactt gagttcttta agctcctctt gtcttatata
     8041 aggtggattg ccgatgatga gatcaaagcc tttgaaattt ccatcatcgt ccaaaatttc
     8101 agggaattca aaacgccatt caaaaggatg attgctttct aggttgaaga tattgtcgta
     8161 ttctttttta agatttgcaa attcttttgt ggcttctttt tcatcaaagt caaaaagagt
     8221 caaattcgca ctaacaaaga atttcaaatt ttcatcatct acggctaaga aatttccgta
     8281 ttttttagag tatttttcac atttatcatt aaagcttttc atttcttttt taaatttatc
     8341 tgcaaagcag aaatttttaa aagaaatttt gagatttttt atctcttggt tgatatggct
     8401 tttatctgtg taaaagcctt ctttatagtc ttttactatg cgtttgtatt tgttaatgcg
     8461 ttctttgatg ttaggatagt ggtttaggct tttgcctgtt tcaaagtaag atactaaaga
     8521 atttccgcat tttatgttta tatcgatgtt tggtaatgtt ttaagatcgt gataattctc
     8581 atcatcaaag ctttgataaa aactatgttt taaaagctct atccaaagcc ttagcttggt
     8641 gatctcgcat gagttagggt tgatatcgac tccaaaaagg ttgttttcta tgatgtcttt
     8701 tttagtgtga aaaagttctt gctggataag atgggcttta tctttaggcg tacttgggcg
     8761 tttatactct ataaactcgc cttttctacc cgtgatgaga atttcatcgt tttgcacttc
     8821 tagataaaat tcttcatcaa aaagatttag ctcatcataa atgcttaaca taacatttaa
     8881 agcagaaacc aaaaaatgcc cgcttcccac cgcaggatcg caaattttta tggaatttaa
     8941 aagctctttt tgtgcttttt tatcttcttt tcttaaagac tttcttagtt cgcttatatc
     9001 tttagcatta agatcaaatt gagcgttgaa tttatcaagc acaacttttg tgatactttc
     9061 tttacacata taagaagtga taaagcttgg cgtgtaaaag cttccttctt tgtagccatt
     9121 gagtttttca aacacatttc ctaaaacact tgaacttatg agttcttttt ggcttaaaat
     9181 ttcgctttgc tcatcatcgc taccaaaatc aaagctatcc aaaaattcaa acaagtattc
     9241 taaaagcccc acttgtcctt ttttagcttt acatttatca tcttttagca cagtgttttt
     9301 atagtaaaaa agctttaagt cattgcttaa gcttgaaatt tcaagtgtgt tttctatgct
     9361 ttgtttttca aacaaagaag aatttagata aggcagatag gcaaattcgc ttttctttct
     9421 cgtgcttttt tctttggcta aaacttcaaa gaaaagttcg ctaagcttgt caaaatcagg
     9481 gatttttttg aaatttaaaa atttcaaatt tttatcatca ttaaaacgca ccaaatttga
     9541 ctctataagc tttaaaaaca aaatgcgatt aagccataag atcaaaagtt ttaagatggt
     9601 ttcaaaattt tcttctttaa gcttagagtt tatagcggtg tagaaagtgc cttgctcttc
     9661 tttactttct tcactttttg cgatgatgag ttttgagttt tgtttgctct cacaaagccc
     9721 taagatatat aaaagctctt tgtaaaaagc gttgttgagt gaatttgcat cgttggggtt
     9781 aaactcactt agcaaaaagt ctctatgaaa agttttataa atacttgcta ggtttttaaa
     9841 atttgatttc tgtttatctt ttaaaaacgt caagtcaatc aaaaagcctt ttaagttttc
     9901 tttggaattt tctatgagtt tggctacttc tttatagaat tcttcagtat tgcctttgaa
     9961 aagtgaattt ggattacaaa attcttcaaa aagtttttta aaacttggat ttttataaaa
    10021 aagctcttca aactcactaa ttttaaaaat gtaaaattta taaaaatctg tgatgataat
    10081 aaattttaag ctaaaactat actctctatt tctaaaataa tataaaatag tctcgtgtaa
    10141 ggctttagaa tttacctttg tatgagtgat aaattctttt gaatttggct ttttagcctc
    10201 aataagaact tctaagtctt tactaaactc atctttagag atggataagt caatctcact
    10261 tttgcctttt tgcttggttt tgatgtgggt tttgaaattt aacatggtta aaaatggact
    10321 aagtgcatta gctacaagat aatcttcatt ttcactttgc gaactttcaa gtctttctag
    10381 atattgcatt aaagccttgc taaatatatc aaattcattt tgcatgattt gctttttgcg
    10441 gtagtatggg ttgaaaaaat ctttttcatt tagcaaagtg aaatgcattt ttaaccttta
    10501 taaaaaatat tttgtatttt atcaaatttt acttttatat aaaatttttt aagaatttaa
    10561 tatatcatta atacctttat atgcttcctg tataggtttt ttaataaaaa aatcatttaa
    10621 aatttgaata aaatcttttt tagaattttg attttcaatt aaccaataaa taaaagcgta
    10681 ttctccttct aatttttcat tgtttattaa tttatcacaa taatagtgat tttgatattt
    10741 tctaacattt tcttctttta catctttaaa taattttaaa cattctttat atttttcatt
    10801 ttctatatct tcttcatcat catttgaaat ttcaaatgtc aaaccaataa tatcatagta
    10861 atttttttta aaataaatat atagacatgg atatatgctt tcattcttat aatcaatagg
    10921 ataaaatata aacacaccat gattaacacg attttcttct attttattgc cgataaaagt
    10981 tatatcacct attttaattt ccttgtgttc aaaactatca aaaaattctt ctattatata
    11041 ttcgcagatg ttgctccatt tatgctggat aatatcttta gctttcttat agttttcttc
    11101 atttaaattt ttaagctctg atttattttt gttatatcta tataaaatca tcgcattttt
    11161 taaattttgc atttttatat tgttttgaaa aataaattct agtacatcat ctctttgagt
    11221 atactcatct gtcatatacc attgtaaaat acttttgtat tgatttagag taaaaataat
    11281 gttttgtata tcaagaataa atttttgatc tttgattgat ttttcttcat atatttttat
    11341 acactcatca atccattcct taatccatat ataatccatc ttcaaataat agctaacatt
    11401 attttcattt ttatctttaa tcaaatttgt ctttattgta aaatttccca aactataatc
    11461 actaggacta gcacactcat cttgatgcaa atatatagtc aatatgtttt tataacaatc
    11521 ttttatattt ttgatatttt ttcttacaaa attaatataa tctttcaatt gatttttttg
    11581 atcttttgca taaattttat tttctattat aatatatctt ttatcactta atgttattaa
    11641 aatatctatc cttctattat cttttatgca ggcttctgtt tctacgcttt ttatatcttc
    11701 tatgtttaaa ttttcaaatt tcgtatttac taaactctta ccaagttttt ctaaaaatac
    11761 ctttgcaaaa tttttttgat aatgatcctt atttatatca attaaataag ctataaattt
    11821 agaatgataa ttttcttttg tttcaatatt caaagcatca aatatattta tatcactcaa
    11881 accattattc acatcttttt caaatttaat atcttcttca agcaaccttt caataaattt
    11941 ttccatgtat cactttccaa attttataca attttacatg taaataaatt tttaattaca
    12001 aactaaaaaa actgattatt aattttatag gcaagt
//
LOCUS       DARATF010000051        11520 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.051, whole genome shotgun sequence.
ACCESSION   DARATF010000051 DARATF010000000
VERSION     DARATF010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11520
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.051"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(644..1509)
                     /gene="dcuC"
                     /locus_tag="SB502_001111"
                     /pseudo
     CDS             complement(644..1509)
                     /gene="dcuC"
                     /locus_tag="SB502_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856491.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            1923..4877
                     /gene="cas9"
                     /locus_tag="SB502_001112"
     CDS             1923..4877
                     /gene="cas9"
                     /locus_tag="SB502_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEG0434557.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQ
                     SVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNLPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNTLLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKALGDHSLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNYSQRAKIEKEQNENYKAKKDA
                     ELECEKLGLKINSKNILKLRLFKEQKEFCVYSGEKIKISDLQDEKMLEIDHIYPYSRS
                     FDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNY
                     KDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAK
                     SGMLTSALRHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELY
                     AKKISELDYKNKKKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEF
                     YQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFAL
                     KVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTS
                     STVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVT
                     KAEFRQREDFKK"
     gene            4874..5764
                     /gene="cas1"
                     /locus_tag="SB502_001113"
     CDS             4874..5764
                     /gene="cas1"
                     /locus_tag="SB502_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEG0434558.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQISISSALFNAFAKYKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            5757..6188
                     /gene="cas2"
                     /locus_tag="SB502_001114"
     CDS             5757..6188
                     /gene="cas2"
                     /locus_tag="SB502_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEG0434559.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF"
     repeat_region   6332..6632
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=6332..6367
                     /rpt_unit_seq="tattttaccataaagaaatttaaaaagggactaaaa"
     gene            complement(6752..7942)
                     /locus_tag="SB502_001115"
     CDS             complement(6752..7942)
                     /locus_tag="SB502_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEG0434560.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENIRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDI
                     IFMP"
     gene            complement(7946..8392)
                     /locus_tag="SB502_001116"
     CDS             complement(7946..8392)
                     /locus_tag="SB502_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEG0434561.1"
                     /translation="MEHFTLYQDSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFNEWQKRVDFDGITLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(8393..8614)
                     /locus_tag="SB502_001117"
     CDS             complement(8393..8614)
                     /locus_tag="SB502_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEG0434562.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDENTKLKTGDKIALLPPVCGG"
     gene            complement(8616..10157)
                     /gene="cueO"
                     /locus_tag="SB502_001118"
     CDS             complement(8616..10157)
                     /gene="cueO"
                     /locus_tag="SB502_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HEG0434563.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEESNTLFLASISLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGK
                     SENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRAFRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            10281..11429
                     /gene="nspC"
                     /locus_tag="SB502_001119"
     CDS             10281..11429
                     /gene="nspC"
                     /locus_tag="SB502_001119"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HEG0434564.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMNKEIHTYSPAFKEDEIGEIASLSHHIVF
                     NSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAI
                     EGLHFHALCEESADALEAVLKAFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIAL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKI
                     VFLDQIHYTIVKNTTFNGIRLPNLMLLDRKNELQMIREFSYKDYSLRN"
BASE COUNT         4196 a         1589 c         1836 g         3899 t
ORIGIN      
        1 ttatgatggt tgataactat tatatattta caaaaagtcc tataaagatg ctcatagata
       61 attataaatt actttttcaa gttgtttatt tcgtttcatt tttaattgtt tggcttatgc
      121 ttaaaggaca aaaaaatgta aaaatatgtt agaatgatga aaaaatacta ttttacgtag
      181 atgtttatta ggatatattc gtatgtctta aagctcttta tggggtgtta agtaattata
      241 atatttaaaa attaaaaaat atatagttta tccacatttt atagtttaac ttctaaaaat
      301 ttgatcatct cttttttcat tttttagagc tagaaaacat atgagtgaaa ttgctttaaa
      361 gttagttaga gcagttgata ctaaatattt tgataagaaa tttaaataga ttgattttac
      421 ttaaattaaa gactttttgc ctcgtgatac aaaattaagt gatgaatttt tagttaaatt
      481 gatattaaat atgaaaaaat tataaatatt aatacttttt caaattaata gtaaatatag
      541 agggtttgat tttttcacaa aagatttgga tagaacttgc aaaaaacttt cttcaatatt
      601 tatactttta aattttgatg caaatcctat tcaatatagc attggcaaaa taaactaaaa
      661 agcttaaaat agctatactc aaaagaattc caaaccatgc aaaatttcct gttccaagat
      721 ttgaaaccgc gttagtaagg atattaactc caccaagtgc tttaatgcct ttagcacata
      781 ctccagcggc gatgattatg cttacgacta agataaaaat ttcagccata gtcttttaaa
      841 atcaccatca tatcttcgcc taattttcta gcatttctgt gtcttgcaaa ttcaacaaga
      901 aaaactaaag aaattcttac aaaatttgct atcacaacat cgagcttgat agtaaaaaaa
      961 tacgctataa ataaaaatat aacaggtaac caaggaaaga gtgtgtaaaa agtagggcat
     1021 ttaggatcaa tgatttgcgg aatttcaact tcatcattta aaacaccttt ttctttatct
     1081 cttttatcaa tccaagcaaa ataaaaagga atcaagatgg caataattac aacataggta
     1141 atcacactat aaatttggta atttaaaaaa agccctacga cattatcact ttgtcctacc
     1201 atatctgcca tattgattga atttccatct tttggatcat aatcaagtgc aattaaagaa
     1261 agcacacata cagttgtaat aggacggatt ttaagtgaga ttaaaacagg atacatacat
     1321 gctaacaaaa gcaaaagcaa ttcagcatag ctagaaatga cgatttttaa agccattcca
     1381 acaacaaaag ttccacttaa aattaagtat ttattttttg atttttcctg agggtttatt
     1441 tgctaaaaaa gcaagttttg ccgaagcatt gatatgtttc atgtaagcag taaagcctgc
     1501 cacactcatg ataataagcc ctgctccaga aagctgactt ttaaaagtcg ctgtgataaa
     1561 agataactat caagtaaaac atttaaaagc ttgtatactc tttgtttgga gtttttggta
     1621 taggtgttcc tgtgatataa aaagcaaaaa taagcaagat aatatttgaa agaaaaatac
     1681 aaaaatggga tcgtattttt ttgagtatat cataaaaatt agcatagggt ctcttgaatt
     1741 tacaataaat tggattttat ctaaattttt aaataaaaaa tattttttat ttaaaaatta
     1801 cttgtttttt gtattataaa attaacatat atagtttggt tactgaaaag tttatgtttg
     1861 tttaaaaaat gatttttgta ttataattat acacaaatca taaatattaa aaaggatcta
     1921 gtgtggcaag aattttggca tttgatatag gaataagctc tattggctgg gcatttagtg
     1981 aaaatgatga gttaaaagat tgtggagtta ggatttttac aaaggctgaa aatcccaaaa
     2041 caggagaatc cttagccttg ccaagacgcc ttgcaagaag tgctagaaaa cgccttgcta
     2101 gacgcaaagc aaggctaaat cacttaaaac atttaatcgc aaatgaattt aagttaaatt
     2161 acgaagatta tcaaagcttt gatgaaagtt tagccaaggc ttataaagga tctttaatta
     2221 gcccttatga gttaagattt agagctttaa acgagctttt aagtaagcaa gattttgcaa
     2281 gagtgatttt acatattgca aaaaggcgtg gctatgatga tattaaaaat agtgatgata
     2341 aagaaaaagg tgcgatttta aaagctatca agcaaaatga agaaaaacta gcaaattatc
     2401 aaagtgtggg cgagtatctt tataaagagt attttcaaaa attcaaagaa aattccaaag
     2461 aatttacaaa tgttagaaat aaaaaagaaa gttatgaacg ctgcatagcg caaagttttt
     2521 taaaagatga attaaagctt atttttaaaa aacaaagaga atttggcttt tctttttcaa
     2581 aaaaatttga agaagaggtg cttagtgtag cattttataa aagggcttta aaagattttt
     2641 ctcatttggt gggaaattgt agttttttta ccgatgaaaa aagagcgcca aaaaatttgc
     2701 ccttagcctt tatgtttgta gcgcttacaa gaattatcaa tcttttaaac aatcttaaaa
     2761 atactgaagg aattttatat acaaaagatg atttaaacac gcttttgaat gaagttttaa
     2821 aaaacggcac tctaacttat aaacaaacaa aaaagctttt gggtttaagt gatgattatg
     2881 aatttaaagg agaaaaagga acttatttta ttgagtttaa aaaatataaa gaatttataa
     2941 aagccctagg tgatcatagt ttaagccaag atgatttaaa tgaaatagca aaagatatta
     3001 cccttataaa agatgagatt aagcttaaaa aggctttagc aaaatacgat ttaaatcaaa
     3061 atcaaattga tagtttaagc aaattggaat ttaaagacca tttaaatata agttttaaag
     3121 ccttaaaact tatcactcct ttaatgcttg aaggtaaaaa atacgatgaa gcttgtaatg
     3181 agcttaattt aaaagtagca atcaatgaag ataaaaaaga ttttttaccc gcatttaatg
     3241 aaacttatta taaagatgag gtaactaatc ctgtggtttt aagggcgatt aaagaataca
     3301 gaaaggtctt aaatgcttta cttaaaaaat acggcaaagt gcataaaata aacattgaat
     3361 tagcaagaga agtaggtaaa aattacagcc aaagagctaa aatagaaaaa gagcaaaatg
     3421 aaaactacaa ggccaaaaaa gacgccgaac ttgaatgtga aaaactaggc ttaaaaataa
     3481 atagtaaaaa tattttaaaa ttaagattat ttaaagaaca aaaagaattt tgtgtttata
     3541 gtggggaaaa gattaaaatt agtgatttgc aagatgaaaa aatgcttgaa attgaccata
     3601 tttaccctta ttctagaagt tttgatgatt cttatatgaa taaggtttta gtttttacca
     3661 agcaaaatca agaaaaactt aataaaaccc cctttgaagc ctttggcaat gatagtgcaa
     3721 aatggcagaa aattgaagtt ttagcaaaaa atttacctac taaaaagcaa aaaagaattt
     3781 tagataaaaa ttacaaagac aaagagcaaa aagactttaa agatagaaat ctaaacgata
     3841 ctcgctacat cgcaaggctt gttttaaact acactaaaga ttatttagat tttttacctt
     3901 taagcgatga tgaaaataca aagttaaacg acacacaaaa aggctcaaaa gtgcatgtag
     3961 aagcaaaaag cggtatgctt acatcggctt taagacacac ttggggcttt agcactaagg
     4021 atagaaataa ccatcttcat cacgccatcg atgcagtaat tattgcttat gcaaacaact
     4081 ctatcgtaaa ggctttttca gattttaaaa aagagcaaga aagcaacagt gcagaacttt
     4141 atgcaaaaaa aattagtgaa ttagattata aaaacaaaaa gaagtttttt gagcctttta
     4201 gtggttttag gcaaaaggtt ttagataaaa ttgatgaaat ttttgtctca aaacctgaga
     4261 gaaaaaagcc aagtggagct ttacatgaag aaacatttag aaaagaagaa gaattctatc
     4321 aatcatacgg cggaaaagaa ggagttttaa aagccctaga gcttggtaaa atccgcaaag
     4381 taaatggtaa aatagttaaa aatggcgata tgtttagagt ggatattttt aaacacaaaa
     4441 agacaaataa attttatgct gtgccaattt atactatgga ttttgcttta aaagtattac
     4501 caaataaagc tgtagcacga agtaaaaaag gtgagataaa agactggatt ttaatggatg
     4561 aaaattatga gttttgcttt tctttataca aagatagttt gattttaatt caaactaaag
     4621 atatgcaaga gccagaattt gtttattata atgcttttac aagctctact gttagtttga
     4681 ttgtttcaaa acacgataat aaatttgaaa cgctaagcaa aaatcaaaaa atattgttta
     4741 aaaatgcaaa tgaaaaagaa gtaatcgcaa aaagcatagg aattcaaaat ctaaaagtat
     4801 ttgaaaaata catagtttca gcacttgggg aagttacaaa ggctgagttt agacaaagag
     4861 aagattttaa aaaatgagtt acgatgaagc ttttaaaaca ctgcttatta gctctaatgc
     4921 caagctaaat ttagagctaa atcatcttgt gattaagcaa gatgaaaata tagccaaatt
     4981 gtttttaaaa gatataaata tcatcgtttt agaaagctta caaataagca ttagttccgc
     5041 actttttaat gcctttgcaa agtataaaat tatcttatta acctgcgatg aaactcatag
     5101 tataaatggc gtttttactc cttttttagg gcattttcaa agtgcaaaaa tcgcaaaaga
     5161 gcaaatgaat gtaagtgctc aaaaaaaggc tattttatgg caaaaaatca ttaaaaataa
     5221 aatcctaaat caagccttta tcttaaaaaa acacaataaa atagagcaaa gcaatgagct
     5281 tataaatttg gctaaaaaag taagcttaaa tgatagtaaa aatattgaag ctgttgcggc
     5341 ggcgctttat tttaaaactt tgtttggtac ttctttttca agagatgagc tttgctttga
     5401 aaattctgct ttaaattatg gctatgcaat cattagggct tgtattatta gagcagtttg
     5461 cataagtggg cttttgcctt ggcttggcat aaagcacgat aatatttata attcttttgc
     5521 gctttgtgat gatttgatag aagtgtttag ggctagtgtt gatgattgtg ttttaaagct
     5581 taagggtgaa agtgagtttt taagcaaaga tgacaaaaga gcgttgattg gcaatttaca
     5641 aagtaaaatc aattttgatg ggcaaaatta tcctttaaac agagcgataa atcattatgt
     5701 ggcaaatttt aaaaatgctt tattgtatga agatgaacta aagatagtga aatttgatga
     5761 ttgaagataa atttatgcgt gtgcttttga tgtttgatgt gccaactaaa agtaaaaaag
     5821 agcaaaaact agcaagtaaa tttagaaata atcttataaa attaggttat tttatgctgc
     5881 aatttagtgt ttatatgcgt atttgcaagg gtttaagttc tgcaaaaagt tctattgaaa
     5941 atgtaaaaaa gattttgcca ccttatggaa atgtaagggc tttaatcatc actgaaaagc
     6001 aatttgataa aatggagctt ttgcttggcg gcatagtttt taacgaaaaa gttaataacg
     6061 aaaccaattt aacgcttttt gatatagata gtcatggaga atttaaatat aaaaattcaa
     6121 ataatgaaga aattcaaata aacaaaaaac aagaaaaata tcatcagcaa aatttatttg
     6181 aattttaaaa gcggttttag gggattgtaa ccccgcagag tcccgcaaac tctttatttt
     6241 agtccctttt taaatttctt atgagattat agcataattt ttgctatttt tcatgaaaaa
     6301 accccgaaat tttcattatc tggtaaatat ctattttacc ataaagaaat ttaaaaaggg
     6361 actaaaacaa tacatttaaa tgggatagat ggaaatcaat tttaccataa agaaatttaa
     6421 aaagggacta aaactctctt gctatagttt tagctctacg atttatttta ccataaagaa
     6481 atttaaaaag ggactaaaac ttacttgctg gtatgaatgt taatttcaat attttaccat
     6541 aaagaaattt aaaaagggac taaaacagca ttaaacaaaa atccacacat tagtttattt
     6601 taccataaag aaatttaaaa agggactaaa ataaacccta gtggattgaa actccactag
     6661 ggctaattac tccactaaaa ggaggttgcg aatttgaaac ttattgaaat ttagggttga
     6721 ttaaaatcga aataaaatta tttaaataat tttaaggcat aaagataata tctactaaac
     6781 tttcattttc taacatttca cattcttttg gcaccaccat aagggcagct ttattgttaa
     6841 gattgtttat aatcgcacta gagccttctt ttttgccttc aagattggct aaaatgcgtc
     6901 catttttaaa ctctatattg caagcgacaa attccaaata aggtgttttt ttcttgtaac
     6961 ttccttgtaa aaaggctttg caaatatagt ctttaggttg aagtaaccaa gagtttaaaa
     7021 tctctcttgt gtaaagatta aacattacca tagccgagta aggaaaacct ggtaaggcga
     7081 tgatgaattt ttcattagcc ttagctattt tgatatgtct acctggtttt atgtcggctt
     7141 tatcgatgat gatttcgtat tctttgatgg ctttttttaa aaagtcaaaa tctcccatag
     7201 aaaccccgcc cgttgtaacc aaaatatcac aactttgcaa agcactttca agggtggaaa
     7261 aagtggcttt ctcatcatct tttaaaagag gaaaaaccct tgtatcgcaa tttaaatttt
     7321 tagctaaatt agctatggcg atatgatttg aagagcggat ttgagcagga ttttccaagg
     7381 cttctcctag atctttgatc tcacttccac tacttaaaac ccctacaata ggctttataa
     7441 acacactaat gtgaaaaaat ccaagttcag ctaaaagagc tatctcgcta taatttaacc
     7501 ttgtgccttt tttgagtaaa atttcatctt ttttatagtt ttctcctacc gcacgcacgg
     7561 caaaagcttg aggaactttt ttttctataa aaagagtatc attttctacg cgtatatttt
     7621 caacagggac taaagtatcg cttccttcgc tcatgagtga gcctgtaaag gtttttacac
     7681 aagtaccatt ttgcacgcta aattgtggca tagtgcccgc aggtgtgagg cctaaaattt
     7741 ttaaaggctt atcttgatct tcaaatttga tcgcataacc atccatagcc gaagttggaa
     7801 attcaggttg gtttttaggg gcttttatgt cttgagctaa aatgcgtcct aaacactctg
     7861 taagagctat tttttcaatc ttttcatagg ttttgatatg agaatgtaaa atttttaaac
     7921 tttcttcata agacattaac attttttatc cttttaaaag tcctgcaccg caaagtttgg
     7981 ttgatctttc tttggcataa attctttctt tgtttattac atcatacttc caaatgggtg
     8041 cacttgcttt aaaatcttca acaaattcat taagaagttt aagtcctaat tttctttgtt
     8101 tgcttaaaat tcctgcaaaa taagagcttt catgaaccgc tacatcacct atagagtgag
     8161 caaaaagcaa ggtaatacca tcaaaatcta ctcttttttg ccactcatta aaccattttt
     8221 ttaaaagcgg ttcataaata tcaaaactaa gtgcctcaat gcctccttct tcacgcacaa
     8281 taccacaaaa agtcagcaaa gcaccgcagt ttttatcctt ggcaaattca taccattggc
     8341 tataaatttt aggaatatct aaagaatctt gatagagtgt aaaatgttcc atttaacccc
     8401 cgcaaactgg cggtaaaagt gctattttat caccagtttt taacttagtg ttttcatcaa
     8461 aaatgatttc atcatttaaa gataccgcac aaagttctag ccattctttt aaactctcat
     8521 ctttttgcaa aatttctttt aattctttta aattttttac ttcaagttct aaattttctt
     8581 tatttatagg gcctaaaaat tccactttta ccattttatt cctttacttc taaatttccc
     8641 atcattccta aatcttcatg ttctaaaata tggcaatgat acattctaag tcctttaaaa
     8701 tcttgtttca ttctaagtct taactcttca ttaggacgca catttatagt atctctgaag
     8761 gctctaaatt cggctttttg aactttgcca ttgagttttg atgagatgag ttcaaattgc
     8821 gtgccgtgta tgtggaaagg atgatccatg tgagatttgt ttatcactat ccagtcttca
     8881 actactccaa gcttggagct taaatcaatg cgttttaaat catagctttt gccattgatt
     8941 aaaaacatag acgcaagagc gatttttaat tcattttcac tttttcccat cattccatgc
     9001 atttgcatat gatcttcact catgattatt tctttaaatt ccttaggttc ttctaaaggt
     9061 ttgaaaattt ttaaattttt tggaagttct aatttttctt tttttaggct aatactagct
     9121 aaaaataggg tattagattc ttcttttacc atcattttgt ccctatcata ataagcactt
     9181 tctagcttaa aattcccatc ttttggagcg tcgattaaaa cttctacacg agaagcagga
     9241 cttaagaaaa gttcttcttt ataaatagct ttttctataa gtccaccatc agtaccaaca
     9301 agtataaact tagctccttg tatgcgtaaa tttaaatatc ttgctgcagt agcattataa
     9361 atgcgtatgc gttcgtttgt ggcgagtttg attttaggtt taaattgtcc attgatgagt
     9421 acaaattctc cttctctacc atttagccaa tcatttaggt tgttgtttgg aatttgagcg
     9481 ttttcatcaa gacgcaaatc gctaatcatc aaatcttttt cttttaaatg acttaaagca
     9541 tctttttttg ctttgatcac aaaagcccct gctaaaccca taaaaacttg tttagaagcc
     9601 gtataatgag gatgtggatg ataccagtaa gttcctgcgc tatcttgagg aatttcaaaa
     9661 cgatatattc tttcttctcc tgctaagata ggatcatgtg ggcttccatc ttgatcaggt
     9721 ggcacaggaa cgccatgcca atgtatagtt gtagcttctt tgagtttgtt tttgactaaa
     9781 atttcaagtt tatctccttc aaaaacttct atttttggag caggcacgag gccattgtaa
     9841 gtataaaata aggttttttt acctttgata agctctatat gattttcttt gatttctagg
     9901 gtagcacgaa aaatattttt ttctttactt tcatttttga gtaaaggcaa ggcttttaaa
     9961 atttctcctt gggggaattg ttttggatct aaaagcttta aattttttgg agcaaagttt
    10021 ataaaagaag tatctaagtc atgatttata gaatgatttt tatgcatgga gtgcatatcg
    10081 tgcataggat ttgcataggc tacacccata cttgctagag taagtgcatt aaattttaaa
    10141 aaatttcttc tattcattag tttttccttt tgcttgattt tttgtattat agtcattatt
    10201 tttttaactt tagtaaatat ttattttgaa aatttggttt aattttgtta tgattttagc
    10261 aatttaatca aggaaaaata atgttttatg aaaaaattca aactccagct tatattttag
    10321 aagaagataa attaagaaaa aattgtgagc ttttagcaag tgttggtgaa aaaagtggtg
    10381 ctaaagtgct tttagcttta aaaggttttg ctttttcagg agcgatgaaa attgttggag
    10441 aatacctaaa aggttgtact tgtagcggac tttgggaagc aaaatttgct aaagaataca
    10501 tgaataaaga aattcatact tattcacctg cttttaaaga agatgaaata ggtgaaatag
    10561 ccagtttatc tcatcatata gtatttaact ctttagccca atttcataaa tttcaagcta
    10621 aaacacaaaa aaattcctta ggtcttcgtt gtaatgttga attttctcta gccccaaaag
    10681 aactttacaa tccttgtgga agatactcaa gacttggaat tcgtgctaaa gattttgaaa
    10741 atgtggattt aaatgctata gaaggacttc attttcacgc actttgtgaa gaaagtgctg
    10801 atgctttaga agcagtttta aaggcttttg aagagaaatt tggcaaatgg atagggcaaa
    10861 tgaaatgggt gaattttgga ggaggacatc acatcactaa aaaaggctat gatgttgaaa
    10921 aacttattgc tttgtgtaaa aatttcagtg ataaatatgg cgtgcaagtt tatcttgaac
    10981 caggcgaagc ggtgggttgg caaacaggaa atttggtggc tagtgtagta gatatcatag
    11041 aaaatgaaaa acaaattgct attttagata cttcaagcga agcacatatg ccagatacta
    11101 tcatcatgcc ttatacaagt gaagttttaa atgctagaat tttggccaca agagaaaatg
    11161 aaaaaatttc agacttaaaa gaaagcgaat tttcctattt gcttactgga aatacttgtt
    11221 tagcaggtga tgtaatggga gaatacgcct ttgataaaaa gcttaaaatc ggcgataaaa
    11281 ttgttttttt agatcaaatt cattacacca ttgtgaaaaa cacaactttt aatggtataa
    11341 gacttccaaa tctcatgctt ttagaccgta aaaatgaact tcaaatgata agagaatttt
    11401 cttataagga ttattcttta agaaattagt attatttata atttgcataa aatgttaatt
    11461 ttactcggaa gagaattaaa gatgtaaatt ttatgcaaag tattttattt tttcaaatat
//
LOCUS       DARATF010000052        11369 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.052, whole genome shotgun sequence.
ACCESSION   DARATF010000052 DARATF010000000
VERSION     DARATF010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11369
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.052"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1925)
                     /gene="pflB"
                     /locus_tag="SB502_001120"
     CDS             complement(<1..1925)
                     /gene="pflB"
                     /locus_tag="SB502_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HEG0434565.1"
                     /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASL
                     PEELPQENSDSGFKFTRESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFSEGKIKPDIIASKPLEQPVVMPDESYKYNDMQRIDGMIQKANALYLKGE
                     VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDV
                     EPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALS
                     TAMKIERDFNQSLAALTLVDIKTGNYQDMLVRLQNSYDNDKDRYKILDTYKIQVRLNK
                     DLFNIAVAQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDST
                     DAGIYLNISKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDITKLYNEILDNIAADSN
                     FKANMQKSMLFLVNNNYISMLPYLDETKKDTPLSLIFEAIVAKNNNLNNQVDVKIAKL
                     RSELPEDILANILYFNS"
     gene            complement(1935..3170)
                     /gene="serS"
                     /locus_tag="SB502_001121"
     CDS             complement(1935..3170)
                     /gene="serS"
                     /locus_tag="SB502_001121"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEG0434566.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTA
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPN
                     IPDECVPVGEDEDENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIHIPDALKKYF"
     gene            complement(3181..4140)
                     /gene="trpS"
                     /locus_tag="SB502_001122"
     CDS             complement(3181..4140)
                     /gene="trpS"
                     /locus_tag="SB502_001122"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEG0434567.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPKAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(4137..4634)
                     /locus_tag="SB502_001123"
     CDS             complement(4137..4634)
                     /locus_tag="SB502_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEG0434568.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKVSEIFEQKGENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKAD
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(4621..6003)
                     /gene="der"
                     /locus_tag="SB502_001124"
     CDS             complement(4621..6003)
                     /gene="der"
                     /locus_tag="SB502_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEG0434569.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEHYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            6105..7037
                     /locus_tag="SB502_001125"
     CDS             6105..7037
                     /locus_tag="SB502_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0434570.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIAYLLKRSKAHKEGGYFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFDGVLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            7034..7849
                     /gene="kdsA"
                     /locus_tag="SB502_001126"
     CDS             7034..7849
                     /gene="kdsA"
                     /locus_tag="SB502_001126"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEG0434571.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQKNGVF
                     VAERGASFGYGNLVVDMRSLVIMCEFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGSNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            7846..8310
                     /locus_tag="SB502_001127"
     CDS             7846..8310
                     /locus_tag="SB502_001127"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEG0434572.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            8310..8708
                     /gene="nusB"
                     /locus_tag="SB502_001128"
     CDS             8310..8708
                     /gene="nusB"
                     /locus_tag="SB502_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEG0434573.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYNGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            8705..9544
                     /gene="pyrF"
                     /locus_tag="SB502_001129"
     CDS             8705..9544
                     /gene="pyrF"
                     /locus_tag="SB502_001129"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEG0434574.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKIHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKK
                     IKEHTSSNFLTLTPGIRPFGETSDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAV
                     CEKILNKIHRKNISENDIEQNYEVIQQKEWDMCNHFEEWIKTQPDKEHALKEFYAKCG
                     IKY"
     gene            9541..10326
                     /locus_tag="SB502_001130"
     CDS             9541..10326
                     /locus_tag="SB502_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434575.1"
                     /translation="MNYQQLECDYFNLYNQFLSVDFQISLFEKDHKGLIKDFIFFYYQ
                     ILKQKDLSYLLEVRNKISLKVYNYMQEHSTSPKDLSLICLRENKHIKFFQIFYKALAY
                     FVAFRKKLDGEQKIKNLISNINDCFGYHFLNSDFNNLQNFQKSDLFTLPEKHLKYFHF
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLVDGTFEIYELIFKEYFLLFSKDKELKDEF
                     RKLKKLEFKILMQETSKIKLLSHYKEFCEEIFYNIELEKITQN"
     gene            10382..11275
                     /gene="msrP"
                     /locus_tag="SB502_001131"
     CDS             10382..11275
                     /gene="msrP"
                     /locus_tag="SB502_001131"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEG0434576.1"
                     /translation="MLITPEKLYKQRRNFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
     gene            11275..>11369
                     /locus_tag="SB502_001132"
     CDS             11275..>11369
                     /locus_tag="SB502_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HEG0434577.1"
                     /translation="MQTKYFKFLAYFSFIISLIYGFYHIIKAFDFV"
BASE COUNT         3855 a         1903 c         1643 g         3968 t
ORIGIN      
        1 aaagaattaa aatacaaaat atttgccaaa atatcttcag gcaactctga acgcaattta
       61 gcaattttca catctacttg attattaagg ttattatttt tagcaacaat agcttcaaaa
      121 atcaaactca aaggcgtatc tttttttgtt tcatctaaat aaggaagcat agaaatataa
      181 ttattattaa ctaaaaataa catacttttt tgcatattag ctttaaaatt agaatcagca
      241 gctatattat caagaatttc attgtaaagt ttagttatat caatatcaat taattttgca
      301 caaaacatag caaaagcacc tgctaagtaa tttttaggat taagatgata tgaacttgaa
      361 aaatgcttat aagcaagttc ataattttgc atttgggcat aagttaaagc caaattataa
      421 tgtaaaatac tatgttctgg ataatccttg ataagttttt gaaattcttg gttagcaagg
      481 cgtaacttct gatttaatgc atagttaata atattggcaa tttttacatt ggtagatgaa
      541 agagctttgc ttatattaag ataaattccc gcatcagtac tatcatctac gaaatctgta
      601 acattagctt ttttaatata taaagcagcc tgcttactat caaaaacctg ataaggtgca
      661 aaataaaaaa gcaaatcgaa ttgatctttt tgttttttta acaaatcttt tgaaaaagaa
      721 ttttgagcaa ctgctatatt aaaaagatcc ttatttaaac gaacttgaat tttataagta
      781 tctaaaatct tatatctatc tttatcgtta tcataagaat tttgcaagcg cactaacata
      841 tcttgataat ttcctgtttt aatatcaacc aatgttaaag ccgctaaact ctgattaaaa
      901 tctctttcaa ttttcatcgc tgtgcttaaa gcgactttag ctttagcata ttctcctatt
      961 ctagcgtata aaagacctaa agataaacta gattcaaaat tgccttgaga atttaattgc
     1021 tgtatagcct tggaatcaaa gtccattttt gcataaattt tagcagacaa atactttgca
     1081 acatcagaat acggctccac atctgttctt tgcaacattt gtaaggcctc agggtaatat
     1141 cctttgtaat aattaatcaa gcttaaataa taatcatata attttgattt tccttctttt
     1201 ggaagataca cttgagctaa atcaatataa tatctaaatt tttccttatc attaagcttt
     1261 aaagcacaaa cagcagcatt gatagcagct acactttgat tttctccatt ggctatagct
     1321 ttcttgaagc tttcaaaagc ttcttggaat ttattctcat tcatttgaga aacgcctaaa
     1381 ttataattag ataaagattc gttatatacg gcaacttgct cataaacttt taaagcctgt
     1441 tcaacctcac cctttaaata taaagcattt gctttttgga tcataccatc aattctttgc
     1501 atatcattgt atttatatga ttcatcaggc ataacaacag gttgttctaa aggcttagaa
     1561 gctataatat ctggtttaat ttttccttca ctaaaagtta aataaaaaag tgtaaaaact
     1621 aaaatgcaaa taatccccaa agataaaccc acaagagaca taaacttacg atctttatac
     1681 caaggcgtag gctcttgact ttcaacttct tcaaaagttg atacatcttc aggcgcactt
     1741 tctcttgtaa atttaaaacc actatcacta ttttcttgag gtaattcttc tggcaatgat
     1801 gcaaattctt catcttctgg agcttgcccc tcttgcccct taaatccctc taaactctca
     1861 tcaagtcttg gttgatttaa gccatcttcg ggtttttcta gtattatatc ttcttgttca
     1921 gccatctata ctctttaaaa atattttttc aaagcatcag gaatatgaat ttttccttct
     1981 ttatcttgat aattttccat aatcgctacc aaggttcttc ctactgccaa agatgagcca
     2041 ttaagagtgt gaacgagttc attttttcct tgttcgtttt tatagcgaat tttagcgcgt
     2101 cttgcttgaa aatcacgaca atttgaaacc gagctgatct cacgatattt attttgtcct
     2161 ggaagccaca cttcaagatc tacagttttt gccgcactaa aacccaaatc tccggtgcaa
     2221 agcatcaaat gtctatgcgc taaacctaaa gaactcagca aatcacttgc acactcaagc
     2281 atttcattaa acacgctatc actttgctca ggtttagtga tacttacaag ctctactttt
     2341 tcaaactggt gttgtcttat aatacctctt gtatcacgcc ctgcactgcc tgcttctttt
     2401 ctaaaacaag cactataaca agtcattttt atcggtaaag tttcactagc taaaatttct
     2461 ccgctgtaaa gattggttac tggaatttca gaagttgaga tcaaatacaa atcctcatca
     2521 tctaccttat acatatcttc tttaaatttt ggcaactgac ctgtcccaaa catagtagca
     2581 ccatttacca aaaaaggtac attaacaaat tcaaatccac gacttctatt aaaatctatc
     2641 atataattta ccaaagcacg gcttaataaa gctccttcgt tcttaagcac acaaaaacgg
     2701 ctttgtgaaa tttttacccc acgcacaaaa tcaagccaat ttaaactctc tcctaattca
     2761 aaatgctctt ttggagtaaa atcaaagcta ggtggattta aaactttttt aagctccaca
     2821 ttttcatctt cgtcctcacc cacaggcaca cattcatctg ggatatttgg gatggcatga
     2881 gcgatttctt caagctcatt ttctaaagca tttactttag cgctttgctc attaattttg
     2941 cttttatttt cgcttaattt tgcttttaaa ctttctttat cttcggctgt agcaagttct
     3001 ttactgaatt tattttgaaa agcttgaaat tcttctaaag ctgttttttc tttttttaaa
     3061 cttgcaaaaa gttcagcaag tttttttaag atattttcat caactttttt attttttaac
     3121 tttttagcca cttcatcaaa attattttgc aaatttttta aatctagcat tttctactcc
     3181 ttaaagtccg attttttcat aaattttttg cattttttct tgggcgattt ttcttgcttt
     3241 tgtcgcacca aaatccaaaa tttctttcaa atgcgaaggc ttttctaaaa gctcattata
     3301 tttttctctt gcttctttaa aataagcatt tacaagctcg tttaaataca ttttaaaatg
     3361 tccataaccc tcaccacctt tttcatagcg tatttgtaat tctttttgcc ctgattcatc
     3421 taaaaaaagc tttgcgattt taaaaatatt gcagttttca tgatcttttg gatcttctaa
     3481 agcggtgcta tctgtaacta tggaagaaat ttgttttttt aaggtttttt cactgctaaa
     3541 aatatctata gtattttgat aagatttact catttttgcc ccatcagtgc ctacaactac
     3601 agctacttct tcattaactt tagcctttgg aagggtaaaa atttcacccc attcattatt
     3661 aacttttaaa gcaatatcac gtgcgatttc aacatgttgg atttgatctt ttcccacagg
     3721 aacaatttgt gtatcaaaaa gtaaaatatc agctgccatt aaaacaggat aagaaaaaag
     3781 cccatgtgaa gcactaagcc ccttagcaac tttatccttg taactatgcg cacgctctaa
     3841 taaacccata ggagtaaatt gcgataaaat ccaataaagc tccataactt ccttaacatc
     3901 actttgcaac caaaaaacgc ttttttgagg atctatacca aggcttaaaa aagccgcagc
     3961 agcttttaag gaattttgtt taagtttttc tccatcttga gaagaagtca tggcatgata
     4021 attagcaata aacataaaca tttggctttt ttcttgtgca tctaccattt gcttaatcgc
     4081 accaaaataa ttacctatat gcaaatcgcc acttggctga aggcctgtta atactctcat
     4141 tttatcacct ttttaatctc gcttaaaagc tcatctatat ttttattttc tatatttaaa
     4201 ataaaatttg ccttttgttc atacttgctt aaacgctcat tatataattt ttttgcttta
     4261 atttcatcat aaaataaagg tcttttagaa atttcatctt tgtctaaacg cttttttaaa
     4321 tattcaaaat ctgcttttaa ataaatacaa aaacctgctt tttctaaatt tgaaacatta
     4381 acaaaacccc cgcctgtagc aatacaagct ttctcacaag aactaaaaaa atcagccatt
     4441 ttttgctctt gttctctaaa aaaattttcc cctttttgtt caaaaatttc actgactttt
     4501 tgattaaatt tttgttctat taaaaaatca ctatctaaaa aaacaagatc taaatcctta
     4561 gctaaagctc ttgctaaagt gctttttcca gaacccataa atcctataaa aacgatattt
     4621 ttagctttca tcattttctt tactgccctt tttacgcgaa gcaatcacta aaggcacacc
     4681 ttcaaaatta aattcttttc tgatttgatt ttgtaaataa cgcttatagc taaaatgcaa
     4741 ggccttagga cgattcataa taagtgcaat ttttggcggt gctaagtcat attgtactgc
     4801 ataataaatt ttaaccaatt tcccataatc atgcggcaaa ggatgtgctc ttgtggcatt
     4861 ttctatcaag gtattaagct tagaagtttg gattttttga gtgaaatttt caaaaatttg
     4921 caaaatttta tcgagtaaaa catgcaccct ttttccactt aaagctgata cgctaatcac
     4981 gggtgcgtaa gctagaaatt taaaacgatc aagacgcaat tcttttacag tcttatcaaa
     5041 atccatctca cttttatccc atttatttaa aacaataatc acacctaaat aatgcttagc
     5101 cacaagccca gcaatgcgtt catcaagctc gttaaagccc tcatgcgcat ctaaaaccaa
     5161 aagtgctatt tgagaatgag ataaaatttt ttccgtgcga tttagggcaa agcgttcgag
     5221 tccttgaatt ttaccccttt ttctaatacc tgcagtatca acaaattcta tcactttatc
     5281 tttatgaact acactttcat taacaggatc tatagtagtt cctgcaatag aacttacaac
     5341 actgcgttct tgtttaacca aagcatttaa aagacttgat tttccaacat ttacacgccc
     5401 tacaataccc actctgatat gattttgatc gacttcttta aattgaaatt cttttccttc
     5461 ttcataatgc tctaaaaaat cttctaaatt ttcttcttca tcggggatta aaaactcttc
     5521 atgtaaaaat ttttcaagcc attcataaag ttcatctaag cctacattat gggttactga
     5581 aagattaaag atttccttta cgccaaaatt tgcaaactcc caagcccttt cttcatcttt
     5641 tttattatct actttattaa tcactaaggc tataggtttt ccaagttttt ttaaagaata
     5701 aaaaaactgt ctatcctcat catcaggcgc taatttccca tcaactagat aaagtatgat
     5761 atcgctttct ttagctactt ttaaagtgtt ttttttcaca tttttaaaaa gttcatcact
     5821 ttcatcaagc cccccactat caataagcat ggcttttttt gaatgaatat gaatttgcgt
     5881 tttatttgta tctctagttg tgcctgaaat atcacttgta atagctattc tttgtcttgc
     5941 cattctatta aaaaggcttg attttcccac atttggctta cctataagta taatgctttg
     6001 catttttttc ctagaaaatt atatttttaa aattatataa aatttggctt aatattaagc
     6061 aaaaaaagac tagaattaac ccagatttta gtcaaggaaa aaaaatgcta aaagtaatca
     6121 agcataattt aggaatttat ttcatgattt tagcatgttt ggattttgca cttatgggag
     6181 cttgtgcaaa aattcttagc aaggaaatga gttctataga aattatgttt tttagaaata
     6241 tcataggaat ttttttcata gcctatcttt taaaacgatc taaggcacat aaagaagggg
     6301 gatatttttg gctcttggta tttcgtggag tagtaggcac gctttcacta tatatgtttt
     6361 tctataatgt ttcaaatatt acactaggtg gagcttttgc ttttcaaaaa actgctccta
     6421 tttttattac tttaatagct tttgttgttt ttaaagaaaa tattggcatc aaaggctgga
     6481 taggaatttt aatagcattt gatggagtgc ttttaatcgc tcagccttgg gctcataatt
     6541 taaatcattc aggctttgat ttaaaaaatt cagttatagg tatcacgagt ggatttttag
     6601 ccgctttagc tcttacaagt gtaagagaac ttagaaaatc ttacactaca gaacaaattg
     6661 ccttttcttt tatcctttta ggaaccttaa tgcctttaat ttctatgatc agtgctgaat
     6721 tttttgaacc acagcatctt gattctttac atttagattt cattctagca ccttttgtga
     6781 tgccaagtct tacagcttgg cttatcattg ccattatggg aactttaggc accatttatc
     6841 aaattcatgt cactaaagct tatggtatcg ctaaacaagc aggagtggtt gccggagtta
     6901 gttatcttga tgtagtattt agtatgatag ttgggataat tttgggagat aatttaccaa
     6961 gtactatggt ttttttaggt ataataggca ttatttttgg tggattaatt ttagttaaga
     7021 acaaaggaaa aaaatgaaaa aaatgatact cattgctggt ccttgcgtga tagaaagcaa
     7081 agatttgatt tttaaagttg ctgaacagtt aaaaaatttt aatgaaaatc caaatataga
     7141 attttatttc aaatcaagtt ttgataaggc caatcgcaca agtattaatt cttttagagg
     7201 tcctggtctt gaagaaggat taaaaatttt acaaagcgta aaagatgaat ttggtatgaa
     7261 aatcttaacc gatatacacg aaagcaatca agcaaaccct gtaagtgaag tagctgatgt
     7321 cttgcaaatt cctgcttttt tatgtcgtca aactgattta cttgtagccg cagcaaaaac
     7381 taaggcaaaa gttaatatca aaaaaggaca atttttaaac ccaagcgata tcaaatacag
     7441 cgttaaaaaa gttctacaaa cccgtggcat agaagatgaa ggctatgaag ctgctcaaaa
     7501 aaatggtgtt tttgtagctg aaagaggagc tagctttggc tatggaaatc tagtagtaga
     7561 tatgcgttct ttagttatca tgtgtgaatt tgctccagtt atttttgatg ctacccatag
     7621 tgtacaaatg ccaggggctg caggtggaag tagcggaggg aaaagcgaat ttgtagaacc
     7681 tttagcaaga gcggcagcag ccgtaggcat agatggcttt ttctttgaaa cacatattaa
     7741 tccttgcgag gctttatgcg atggatctaa tatgcttaat cttacacgcc ttaaaaattg
     7801 cgttaataca ttactagaaa tacaaaatat cataaaggaa aacaaatgaa tattattgaa
     7861 ggaaaattaa atttagactc aaatacaaaa attgctatca ttaatgcaag atttaatcat
     7921 atcatcacag atcgccttgt agaaggagca aaagatgctt ttttaagaca cggaggcaaa
     7981 gaggaaaatc taagccttat acttgttcct ggtgcttttg aacttccgta tgcgttaaaa
     8041 aaagctatag aaagcaaaaa atttgatgca atttgttgcg taggtgcagt aattcgtggc
     8101 tcaactccgc attttgacta tgtttcagca gaaaccacca aaggcatagc caatgtgagt
     8161 ttaaatcata atatccctgt aagctttggt gttttaacta cagatacaat agaacaagcc
     8221 atagaaagag ctggaagcaa agcaggcaat aaaggctttg aagctatgac aactgtaatc
     8281 gagatgttaa atttaagcaa ggagctttaa tggcaacgcg tcatcaagtt cgccaaagcg
     8341 tcatctcctt gctttatgct tttgagttaa attctcaaaa caacgttttt gtagatgaaa
     8401 ttttagatga aaaaaaaata cgcaatgaac aaaaaaattt tactttaaat ttatataatg
     8461 gaattttaga taatttaaac aatattgatg aaaccttaaa ttcatttcta aatgataatc
     8521 aaattacagc tttaggacat gtagaaagag ctatactaag acttggagct tatgagttac
     8581 tttttaccga tactcctagc gccattgtca tcaatgaggc tatagaactt gctaaagaac
     8641 ttgctaatga caattctcca aaatttataa atggagtttt agatgcctta ataaaggcta
     8701 aaaaatgaag ctttgtgtcg cacttgatct ttctacaaaa gaagaatgct tacaacttgc
     8761 caaagaatta aaaaatttag acatatggtt aaaagtaggt ttaagagcat atttaagaga
     8821 tggttttaaa ttcatagaag aacttaaaaa agttgatgat tttaaaatat ttcttgatct
     8881 taaaattcat gatattccca acactatggc agatgcttgc gaagaagtat caaaacttgg
     8941 tgttgatatg atcaatatcc acgcaagtgc tggaaaaata gccatacaag aagttatgac
     9001 acggcttagc aaattttcaa aaagaccttt agttttagca gtttctgctc ttacgagttt
     9061 tgatgaagaa aatttcttta gtatttatag acaaaaaatt gaagaagctg taattaattt
     9121 ttcaaaaata tcctatgaaa atggacttga tggtatggta tgctctgttt ttgaaagcaa
     9181 aaaaattaaa gagcacacaa gttcaaattt cttaaccctt actcctggaa ttcgtccttt
     9241 tggagaaaca agtgatgatc aaaaacgtgt tgctaatctt gcaatggcta gagaaaattt
     9301 gagtgattat atcgttgtgg gaaggcctat atataaaaat gaaaatccta gggctgtatg
     9361 tgaaaaaatt ttaaacaaaa tacacagaaa aaatataagc gaaaacgata tagagcaaaa
     9421 ttatgaagta attcagcaaa aagaatggga tatgtgtaat cactttgaag aatggattaa
     9481 aactcagcct gataaagaac atgctttaaa agaattttat gctaagtgtg ggataaaata
     9541 ttgaattatc aacaattaga atgcgattac tttaatcttt acaatcagtt tcttagcgtg
     9601 gattttcaaa tttcattatt tgaaaaagat cataaaggtt taattaaaga ttttatattt
     9661 ttttattatc aaattttaaa acaaaaagac ttgagctact tgcttgaggt aagaaataaa
     9721 atttccctga aagtttataa ttatatgcaa gagcactcca cttctccaaa agatttaagt
     9781 cttatttgtc taagagaaaa taaacatatt aaattttttc aaatatttta caaggctctc
     9841 gcttattttg tagcctttag aaaaaaactt gatggagaac aaaaaattaa aaatttgatt
     9901 tcaaatatca atgactgttt tggctatcat ttcttgaatt ctgactttaa caatcttcaa
     9961 aattttcaaa aaagcgattt gttcacctta cctgaaaaac atcttaaata ttttcacttc
    10021 gccatgattc atctttgttt catggtttta aatcctttaa attttaaaga ctctaatcgg
    10081 catcttgata aagcgattaa ttatcttgtc gatggaactt ttgaaattta tgagctcatc
    10141 tttaaagaat attttttatt gttttcaaaa gataaagagc tcaaggatga atttagaaaa
    10201 ttaaaaaaat tagaatttaa aattctaatg caagaaactt caaaaattaa actacttagt
    10261 cactataaag aattttgcga agaaatattc tacaatatag aacttgaaaa aatcacacaa
    10321 aattaatcct gtattaacat tgttatagtt taataataaa aatttttaat aaggaaaaat
    10381 tatgcttata acacctgaaa aactttataa acaaaggaga aattttttaa aacttggagc
    10441 gggtgcttta ataagttcaa gcgtgcttgc ttctaaacta tctgctttaa atttcacaag
    10501 cgatactaat ccaaacaaac ttgaaatcag cgatgaagaa ctggctacaa attatgtcaa
    10561 tttttatgaa ttttcaacag ataaaagaaa ggctgtatca ttggcacaaa atttcaatac
    10621 tcaaaattgg aaaatcgata tcagtggaga aatagaaaaa cctttaactt taagcatgga
    10681 agatatttta aaatttccac tagaagaaag aatttatcgt tttcgctgtg ttgaaacttg
    10741 gtctatggtg gtaccttggg taggctttga attgcgtcgt ttgattgaaa tggcaaaacc
    10801 tacaagcgag gcaaaatttg ttaaatttac cactctttta gataagagcc aatttcccga
    10861 tcaagacgct ttatttccaa ctatagacta tccttatgta gaaggacttc gcatggatga
    10921 agctatgcat cctcttacct tgcttgcagt aggaatgtat aaaaaagcct taaagcctca
    10981 aaatggcgct ccaatacgcc ttgttgttcc ttggaaatat ggctttaaaa gtattaaatc
    11041 catagttaaa atagaattta ccaaagaaca gcctaaatcc acttgggaaa gttacgctcc
    11101 aagtgaatat ggtttttatg ctaatgtcaa tcctaatgtt tctcatccta gatggtctca
    11161 agctaacgag agggctttag gagacttctt taccaaacct actttaatgt ttaatggata
    11221 tgaaaaagaa gtggcaagtt tatataaaaa catggacttg aaagtgaatt tttaatgcag
    11281 acaaaatact ttaaatttct tgcttatttt agctttatca taagtttaat ctatggcttt
    11341 tatcatatca taaaagcctt tgattttgt
//
LOCUS       DARATF010000053        11176 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.053, whole genome shotgun sequence.
ACCESSION   DARATF010000053 DARATF010000000
VERSION     DARATF010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11176
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.053"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            96..407
                     /gene="rpsJ"
                     /locus_tag="SB502_001133"
     CDS             96..407
                     /gene="rpsJ"
                     /locus_tag="SB502_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEG0434578.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            417..992
                     /locus_tag="SB502_001134"
     CDS             417..992
                     /locus_tag="SB502_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEG0434579.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            989..1603
                     /gene="rplD"
                     /locus_tag="SB502_001135"
     CDS             989..1603
                     /gene="rplD"
                     /locus_tag="SB502_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEG0434580.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGALFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIIEKSALESITKEG"
     gene            1606..1887
                     /locus_tag="SB502_001136"
     CDS             1606..1887
                     /locus_tag="SB502_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEG0434581.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLENTEA"
     gene            1889..2719
                     /gene="rplB"
                     /locus_tag="SB502_001137"
     CDS             1889..2719
                     /gene="rplB"
                     /locus_tag="SB502_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEG0434582.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVSAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            2721..3002
                     /gene="rpsS"
                     /locus_tag="SB502_001138"
     CDS             2721..3002
                     /gene="rpsS"
                     /locus_tag="SB502_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEG0434583.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            3013..3456
                     /gene="rplV"
                     /locus_tag="SB502_001139"
     CDS             3013..3456
                     /gene="rplV"
                     /locus_tag="SB502_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEG0434584.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVVVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKAEEKKTVAKKAPAAKKTTTTKAPAKKTTSTKKATAKKES"
     gene            3456..4157
                     /gene="rpsC"
                     /locus_tag="SB502_001140"
     CDS             3456..4157
                     /gene="rpsC"
                     /locus_tag="SB502_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEG0434585.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            4160..4585
                     /gene="rplP"
                     /locus_tag="SB502_001141"
     CDS             4160..4585
                     /gene="rplP"
                     /locus_tag="SB502_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEG0434586.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            4572..4757
                     /gene="rpmC"
                     /locus_tag="SB502_001142"
     CDS             4572..4757
                     /gene="rpmC"
                     /locus_tag="SB502_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEG0434587.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            4767..5018
                     /gene="rpsQ"
                     /locus_tag="SB502_001143"
     CDS             4767..5018
                     /gene="rpsQ"
                     /locus_tag="SB502_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEG0434588.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            5018..5386
                     /gene="rplN"
                     /locus_tag="SB502_001144"
     CDS             5018..5386
                     /gene="rplN"
                     /locus_tag="SB502_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEG0434589.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            5386..5619
                     /locus_tag="SB502_001145"
     CDS             5386..5619
                     /locus_tag="SB502_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEG0434590.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            5623..6168
                     /gene="rplE"
                     /locus_tag="SB502_001146"
     CDS             5623..6168
                     /gene="rplE"
                     /locus_tag="SB502_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEG0434591.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            6170..6355
                     /locus_tag="SB502_001147"
     CDS             6170..6355
                     /locus_tag="SB502_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEG0434592.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            6365..6760
                     /gene="rpsH"
                     /locus_tag="SB502_001148"
     CDS             6365..6760
                     /gene="rpsH"
                     /locus_tag="SB502_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEG0434593.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            6839..7375
                     /gene="rplF"
                     /locus_tag="SB502_001149"
     CDS             6839..7375
                     /gene="rplF"
                     /locus_tag="SB502_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEG0434594.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            7385..7741
                     /locus_tag="SB502_001150"
     CDS             7385..7741
                     /locus_tag="SB502_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEG0434595.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            7753..8196
                     /gene="rpsE"
                     /locus_tag="SB502_001151"
     CDS             7753..8196
                     /gene="rpsE"
                     /locus_tag="SB502_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEG0434596.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            8201..8593
                     /locus_tag="SB502_001152"
     CDS             8201..8593
                     /locus_tag="SB502_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEG0434597.1"
                     /translation="MNLTKAAGSTRKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFESIKSVHKISKSV
                     NKIKLIGASAKDLVPKIKDENISVTGSK"
     gene            8593..9858
                     /gene="secY"
                     /locus_tag="SB502_001153"
     CDS             8593..9858
                     /gene="secY"
                     /locus_tag="SB502_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEG0434598.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYIELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(9886..11157)
                     /locus_tag="SB502_001154"
     CDS             complement(9886..11157)
                     /locus_tag="SB502_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434599.1"
                     /translation="MNDKIYKFHPNDTKMDKKIIQITEKSGFKVAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGIL
                     MDKFGKLKFILPAMVVWTISGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFYNHTKIETKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVL
                     IALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQ
                     MGLVDAFLIWSIVIFIVCIVFLFLKQKPRIN"
BASE COUNT         4174 a         1572 c         2267 g         3163 t
ORIGIN      
        1 tccttgactt tgaaaacaag attttatata ctctcatttc aatttttata aattggttag
       61 tttttaacta acgagttctt tttaaaggaa atattatgga aagaattagg cttaagctaa
      121 aagcttatga ccatcgagta ctagacagaa cagttgcagc aatcgtagaa gctgttaaaa
      181 gaacaggtgc ggatatcaga ggtccgatac caatgcctac taaaatcaaa cgctatacag
      241 ttttaaaatc tccacacatt aacaaagatt ctcgtgagca gtttgaaata agaattcacg
      301 cacgtatgct agatatagta gcagcgactc cagatacagt tgattcttta actaagcttg
      361 atttagcgcc agaagtaagc gttgaagtaa gagctatggg taagtaagga taagatatgg
      421 aatatattgt agaaaaaatc ggaatgagca gaacaattac taatccaagt atcgctgtaa
      481 ctttactaag agttgtaaat gcaaaagtat gtgaagttga aggcggaaag gctttagtag
      541 catatccaaa aggtaaagca agtaataaat gtgtcgcagg acaacaaaaa aagtataatc
      601 tttctgcaga atacaataga tttgcgactt tagaagtagc aaatactgaa gcaggagatt
      661 tagatgaaac tccattaaat gaagcaaaaa ttttaaaagt aagctttaac actaaaggta
      721 gaggttatag cggtgttatg aaaagacata acttcgcagg gggtccagca agtcacggtt
      781 ctagatttca cagacgccac ggatctattg gcaatagaga atggccaggt cgtgttcaac
      841 caggtatgaa aatggcagga cactatggaa atactaaagt gaccgttaaa aacgaagttg
      901 tatcttatga tgctgaaaac aaaattttag tagttaaagg tgcagtacca ggttataatg
      961 gtgctatggg taaaataagg attgcaaaat gagtaaagta gttgttttaa atgataaatt
     1021 agaaaaagca ggtgaacttg atttaccttc aaaatatgcg gaagtaaatc cacacaatct
     1081 ttacttatat gtaaaatctt accttgcaag tttaagagca aatacagctc atactaaagg
     1141 tagaagtgat gtaagtggtg gtggtaaaaa accttggaga caaaaaggtc gtggcggtgc
     1201 tagagcgggt tcaacaagaa ctaacgtttg ggtaggcggt gcggttgctt ttggtccaac
     1261 aaatgaaaga aactacttcc aaaaagtaaa taaaaaacaa aaaagattgg cgcttgaaag
     1321 agctttagca gataaagcag ctaagggagc gttatttact gctgattctt tggctattga
     1381 aagtggtaaa acaaaagatg caaacgctgt gattaaaaaa cttggcgtca aagatgcttt
     1441 aatcgttaaa gatttactag atgaaaaaac acttttagct tacagaaatt tagcaaattg
     1501 ctatgtagtt gatgtaactg aagtaaatgc ttatttagta tctgtattta atgctgttat
     1561 catagaaaaa tcagcgttag aatctattac aaaagaggga taattatggc agatattact
     1621 gatataaaga ctatacttta cacagaaaaa agtttgaatt tgcaagagca aggtgtcgta
     1681 gttattcaaa cttcaccaaa gatgactaaa acaggcttaa aagcggtttt aaaagagtat
     1741 tttggtgtaa ctccaaaaag catcaattca ttaagaatgg atggaaaagt taagcgtttt
     1801 agaggtcgtt taggtcaaag aaacgattac aaaaaattct atgttaagct acctgaaggt
     1861 gttagcttag aaaatacgga ggcttaagat ggcaattaaa acttataaac catatactcc
     1921 aagtagaaga tatatcacag gtttaagttc tgaagatatt acagctaaac caagtgtacg
     1981 ctcactactt gttaaacttc cagcacacgc gggtcgtaac agctatggaa gaattacaag
     2041 tcgtcataaa gaagcgggtg ctaaaaaact ttacagaatt attgatttta aacgtcgtaa
     2101 attcggtata gaaggcaaag tagaagcaat cgagtatgat ccatatagaa attgtagaat
     2161 tgctttgatt gcttataaag atggggaaaa aagatatatt cttcaaccac gtggattaag
     2221 cgttggtgat atagtttcag ctgctgaaag cggacttgat attaaaccag gcaatgcaat
     2281 gaaacttaaa aacattcctg tgggtactat tgttcataat gttgagttaa aaccaggtaa
     2341 aggcggtcaa atgatccgtt ccgcaggtgc ttatgcacaa cttatgggta aagaagaaaa
     2401 atatgttatt ttaagacttg caagtggcga aatgagacaa gttttagctg aatgtatggc
     2461 aagtatcggc gaagttggaa atgaagaatg ggctaatgta actatcggta aagcaggtag
     2521 aaatcgccat agaggtatcc gcccgcaaac tcgtggttct gcaatgaacc cagtagatca
     2581 cccgcacggt gggggtgaag gtaagaaaaa ttcaggccgt catccagtaa ctccgtgggg
     2641 taaaccaacc aaaggtgcga aaactcgtcg taaaaaggct agcgataagc taataatttc
     2701 aagaagaaaa ggaaagtaag atggctagat cactaaaaaa aggtcctttt gttgatgatc
     2761 atgtaatgaa aaaagtcatc gctgctaaaa aggctaatga taataaacca attaaaactt
     2821 ggtcaagaag aagcacaatt actcctgata tgataggact tacatttaat gttcataatg
     2881 gtaaaagctt cattccggtt tatattactg aaaatcacat cggttataaa cttggtgaat
     2941 ttgctccaac acgcacattc aaagggcata aaggctctgt gcaaaagaaa attggtaagt
     3001 aagggataag atatgagtaa agcattaatt aaattcataa gattatctcc aactaaagca
     3061 agattgattg ctagagaagt tcaggggatg aatgcagaat tagctatggc tagtttaaaa
     3121 tttatgccaa ataaaggtgc aaaatacatc gcaaatgcaa tttcaagtgc agtagcaaat
     3181 ggtggctttg aagcaaacga agtggttgta aaaagttgtc gtgttgacgc agctgcggta
     3241 ttaaaaagat ttagaccaag agctagagga agtgcaagtc gtattagaaa accaacttca
     3301 catattttag tagaagtggc aaaagcagaa gtgaaagctg aagagaaaaa aacagtagct
     3361 aaaaaagctc cagcagctaa aaagactact acaacaaaag ctccagctaa aaaaacaaca
     3421 agcactaaaa aagcaacagc gaaaaaggaa agctaatggg acaaaaagtt aatccaattg
     3481 gtctaagact aggaatcaat agaaattggg aatcaagatg gtttccgact aaagcaaatt
     3541 tagtagaaaa tatcggtgaa gattacaaaa tcagagcttt cttaaaaaga aaactttatt
     3601 acgcaggaat cagtcaaatt ttagtagaaa gaactgctaa aaaacttcgc gttactgtag
     3661 ttgccgcaag accaggtatc atcatcggta aaaaaggtag tgatgttgat aatttaagaa
     3721 aagaattgca agatttaatc ggtaaagatg taaatatcaa tatcaaagaa gaaagaaaag
     3781 caggagcttc agctcaactt gctgctgaaa gtgttgcaac tcaacttgaa aaaagaattg
     3841 cttttagaag agcgatgaaa aaagtaattc aaggtgcgca aaaagcaggt gctaaaggga
     3901 ttaaagtttc agtttctggt cgtttaggcg gtgctgaaat ggcaagaaca gaatggtatc
     3961 ttgaaggacg cgttccactt catactttaa gagcaaaaat tgattatggt tttgcagaag
     4021 ctagaactac ttatggaaac ataggggtta aagtatggat ctttaaaggt gaagtattgc
     4081 acaaaggtat gcaacctgaa aaaactgaag aaagtgctcc agctaaaaag ccaagacgca
     4141 caagaagggg taaataatca tgttaatgcc aaaaagaact aaatatcgca aaatgatgaa
     4201 agggcgtaac agaggttatg ctaatcgtgg aacagaattt acttttggtg aatttgcatt
     4261 aaaagcaact gaagcaggac gcattaactc acgccaaatc gaagcagcgc gtatcgcttt
     4321 aactcgtttt gttaaaagac aaggaaaaac ttggattaga gttttcccag ataagccttt
     4381 gacaaaaaaa cctttagaaa ctcgtatggg taaaggtaaa ggtgctgttg aagaatgggt
     4441 aatgaatatc aagccaggtc gtattattta tgaaatggca ggagtaagcg aagaaatggc
     4501 aagagaagca ttgactttag ctatgcataa acttccattt aaaactaagt ttgttacaag
     4561 agagagccaa aatgaaatat actgagatta aagataaaac agcagctgag cttgcaacaa
     4621 tgctaaaaga aaaaaaggtg cttttattca ctttaaaaca aaagctaaaa acaatgcaac
     4681 ttactaatcc aaaagagatt agccaagtaa aaaaagacat tgctagaata aatacagcaa
     4741 ttaacgcttt aagataagga tagaaaatgg catttaaaag agaaattcaa ggcgttgttg
     4801 ttaaaatcgc tggtgaaaaa accgcaagtg ttttggttga aagaaaagtg gttcatccaa
     4861 gatatagaaa aattgttaaa cgctttaaaa aatatctaat tcatgatgag agaaatgaag
     4921 ttaaagtggg tgatactgtt gttgcagtag aatgcagacc actttcaaaa agaaaatcat
     4981 ttcgcttaaa atctgtatta gctacaggag ttgagtaatg attcaaagtt ttacaagact
     5041 tgcagttgct gataatagcg gtgcaaaaga attaatgtgt atcaaggttt tagggggtag
     5101 caaaagaaga tacgctaccg taggtgatgt aatcgttgca tctgttaaaa aagctttacc
     5161 aaatggaaaa gttaaaaaag gtcaagtggt aaaagcggtt atcgttagaa ctaaaaaaga
     5221 aattcataga gataatggtt ctttgattcg ttttgatgaa aatgctgcgg ttattcttga
     5281 caacaaaaga gagcctatcg gaactcgtat ctttgggcca gtgggcagag aagttagata
     5341 tggtggcttt atgaaaatcg tttcactagc accggaggta ttataatggc ggttaaatta
     5401 aaaatcaaaa aaggtgatag cgttaaggtt atcacaggcg atgataaagg taaaacaggt
     5461 aaagttttag cggtatatcc aaaaacactt aaagtggtag ttgaaggatg taaaatcgct
     5521 aaaaaagcta ttaagccgag tgagaaaaac ccaaatggtg gttttatcaa taaagaaatg
     5581 ccaatggata tttccaatgt ggcaaaagtt caggagtaag cgatgatgag attaaaagaa
     5641 aaatataatc aaagcattaa acctgcattg gttaaagaat ttgatattaa aaatcctatg
     5701 cttatccctg tgatcgaaaa agtagttatc agcgtaggtg ctggtgagtt ggctaaagat
     5761 caaaaagtat tgcaaaatgt tgcagatact atttctttaa ttgcaggaca aaaggctgtg
     5821 attactaaag ctaaaaaatc agttgcagga tttaaagttc gcgaaggttt tcctgtgggt
     5881 gtaatggtaa ctttaagaaa agaaaatatg tatgcttttc ttgataaatt aatttctatt
     5941 gctttgccaa gggtgaaaga ctttagaggt ttaagtagag atggttttga tggacgcgga
     6001 aactataact tcggtcttga tgagcagttg atgttcccag aagtggagta tgataaaatt
     6061 ttaagaactc atggtatgaa catttctata gttacaacag cacaaaatga caaacaggca
     6121 caaaagttat tagaacttat cggtgtgcca tttacaaaag gaaagtaaga tggctaaaaa
     6181 atcaatgatt gcaaaagcgg cacgcaagcc taaatttaaa gttagagctt atacaagatg
     6241 ccaaatttgt gggcgtccgc attcggttta tagagatttt ggaatttgca gagtttgctt
     6301 aagaaaaatg ggcaacgaag gtttgattcc aggtcttaag aaagcaagtt ggtaaggata
     6361 aaatatgata aatgatatta tttcagattc actcactcgt atcagaaatg caggaatgag
     6421 aaagcttgaa acaaccaagc ttttacattc taaagttgta gaagctttag ttggaatttt
     6481 tcaagctaag ggctatattg agagttttaa tgttattgaa gaagataaaa agaaatttat
     6541 caatgtagtt ttaaaatacg atgaaaaagg taagagtgtt atcaatgagc ttaaaagaat
     6601 ttctaagcct ggtcgtcgtg tttataaagg taaagatgaa atcaagcgtt ttaaaaatgg
     6661 ttatggtact atcgtagtta gcacaagtca tggcgtttta gctaatgatg aagcttataa
     6721 agcaggtgtt ggcggcgaaa ttttatgtac catttggtaa aaaatctgct ttttatggca
     6781 ttgggtatcc attcttttaa aaaagtagaa atatcctaga caaataaaaa ggaaaaatat
     6841 gtctcgtata ggtaaacaac cgattgctat tccagcagga gtagaagtaa aattagaagg
     6901 aaatttgctt aaatttaaaa aaggaaattt agcaaaagaa cttgatacta aagcaaatgt
     6961 aaatgttgag attaaagata ataatattct tttttctcca aaaggtgaag acagacaaag
     7021 tagagcttat tggggaactt acagagcttt agcttacaat atcgttgtag gtttaactca
     7081 aggtttttca aaaactcttg aaatcaatgg agttggttat aaagcagctt taaaaggtaa
     7141 agttttagaa ctaagccttg gtttttctca tcctattaat tatgatattc cagaaggaat
     7201 tgaaattgta gtggataaaa atactattgc agttaaagga agtgataaac aagttgtagg
     7261 tcaagttgct gctcaaattc gtgaatttag accaccagag ccatataaag gaaaaggcgt
     7321 taagtattct gatgaacgca ttatccgcaa agctggtaag acatctaaga agtaagggta
     7381 gaatatgaga gcaaatgtat taaaaagaaa actaacttta agaatcaaaa gaaaaaaaag
     7441 aattagagcg aaaatttcag gttgtgaaaa ttttccaaga atttctgtat ttaaatcaaa
     7501 cagaactcta tatatccaag cgattgatga tgtaaaagct gtaactttag cagcagttga
     7561 tggacgcaaa cttggcgtta aagcaaataa agaaggtgct aaaaaaatcg ctgctgaatt
     7621 tgctaaaact ttaaaagcta aaaagataga acaagctgtt tttgatagaa atggttatgt
     7681 atatcatggt gttatcgcag cattggctga atctttaaga gaaaatggca ttaggctata
     7741 aggggtaaat cgatggaaaa atataataga gaagaatttg aagaagtaat cgtcgatatc
     7801 ggcagagtta ctaaggttgt taaaggtggt agaagattta gatttactgc tttagttatc
     7861 gttggaaacc gcaaaggttt agtaggtgtt ggttatggta aggctaagga agttccagat
     7921 gccatccgta aagctgttga cgatgcgttt aaaaatatcg ttgaagttaa aactaaaggc
     7981 tcaactatcg ctcacgatgt agaggtgaaa tacaacgcaa gtagaatttt acttaaacca
     8041 gctagcgaag gtacaggagt tatcgcaggt ggttctacac gccctatcgt ggaacttgca
     8101 ggtattaaag acatcttaac caagtctttg ggttcaaata attcagctaa tgtggttcgt
     8161 gctacaatca aagctttaac aatgttaaaa ggataagaag atgaatttaa caaaagcagc
     8221 gggttcaacg cgtaaaacta aaagaattgg ccgtggtcaa ggttctggca tgggtaagac
     8281 tgctactaaa gggggtaaag gtcaaactgc tagaaaaggt tataatgaaa aaagaggttt
     8341 tgaagggggt caacaaccac ttcaaagaag actaccaaaa gtaggtttta cttctaaaat
     8401 tcaaaaacct tatgtgatca atgttgaaaa aatcacagct gtaaaagagc ttagtgaaat
     8461 tacatttgag agcattaaaa gtgttcacaa aatttcaaaa tctgtgaata aaatcaaatt
     8521 aattggtgca agtgcaaaag acttagtacc aaaaatcaaa gacgagaata ttagcgtcac
     8581 cggatcaaaa taatgaatag agcattgacg aataagattt taatcacctt agcattttta
     8641 tttgcttata gggttctggc ttatgtgcca gttcctggcg tcaatgctga tgtgattgcg
     8701 gaatttttta ataacaatca aaacaatgct ttgggtttat ttaatgtttt tagtggtgga
     8761 gcggctgaac gcttttctat catttcttta ggtattatgc cttatattac tgcttctatt
     8821 attatggagc ttcttgcagc aacttttcca aatattggta agatgaaaaa agagcgtgat
     8881 agtatgcaaa aatatatgca aattatccgt tatgcgacta ttgtgattac tttggttcaa
     8941 agtataggcg ttgctatagg tttgcaaagc ttgcacggtc gtggtggtgc aggggctata
     9001 atggtggaag atttaaatat gtttatcgca ctttgtgcta tttctatgct tgctggaact
     9061 atgcttttaa tgtggcttgg cgaacaaatc acacaaagag gtataggaaa tggtatttct
     9121 ttaatcattt ttgcaggtat tgtttcaggt attccaagag cgatttcagg aactgtagga
     9181 caaatcaatt caggcgagat gaatttctta accgcttttg caatttttgc tttgatttta
     9241 atcaccatag gggtgattat ttatatagaa cttggagaaa gaagaattcc tatttcttat
     9301 tctcgtaaag ttgtaatgca aaatcaaaac aaacgcatta tgaattatat tcctattaaa
     9361 ctcaatctta gtggggttat tccaccgatt tttgctagtg cgattttgat gtttccaaca
     9421 acaattttac aaactagtac aaatccttat ctacaagcca ttaatgactt tttaaatcca
     9481 aatggttatt tgtttcatgt tctaactttc ttgtttgtaa ttttctttgc ttatttttat
     9541 gcttctatcg tatttaacgc taaagacata gcagaaaatt tgaaaaaaca aggcggtttt
     9601 atccctggaa ttcgtccagg tgaaggaact tcaagttatc ttaacgaagt ggcttctcgt
     9661 ttaactttat caggttctat ttatttaggg cttgttgcaa ccttaccttg ggttttggtg
     9721 aaatttatgg gtgtgccttt tcattttggc ggcacttctg tacttattgt agttcaagta
     9781 gcacttgata cgatgagaaa aattgaagct caaatttata tgagtaaata ccaaacttta
     9841 agtgcggtag gtttgtaata aataaaatta gcaagatttt tcttgctaat ttattctagg
     9901 tttttgcttt aaaaataaaa acacaatgca cactataaaa attactattg accatattaa
     9961 aaaagcatct acaagaccca tttgtctaac gataggttga gagataatag gacttaaaaa
    10021 ttgtcctaaa aatatacaac ttgctaaaat tccataagcc ctagagcgag cattttcagg
    10081 acagattgaa aaaagataag ccgtattatt tacaagcata atacctccac ccattccaag
    10141 caaagctaag gcgattaaaa ctgtgaaaaa gctatctact aaaaaaagca gcaaaaaaga
    10201 acaagatacg ataaaaagag ttaaaacata aatagtttta atacttaaga attttataat
    10261 atatctatag cttagagaga aaaaaccata acatagtgca gatacagaca tcgaaatacc
    10321 tatatattta ggatccaatc ccaaatgttc ttctatatag taaggaagtt gagttggcga
    10381 aatataataa actaccatga taaaaaaacc tataaaatag atagggaaaa attgccaata
    10441 atttgttttt gtttctattt ttgtatgatt atagaattta aattttctag gttcaaaaag
    10501 ataaatgata gccattaagg taattaaaat tccaagtcca tataccaaaa aaggataacg
    10561 ccaagaataa cttgaaacaa atcccgcaat agaaataaaa acagcacccc ctactgcaca
    10621 aaaaaatcct tgaagactta aagcattttc tctgcgatta aagccaccac gactataata
    10681 atccccaagc aaagccgaag cgcctgtcat tataaaagca gttgccatac caaaaatagc
    10741 tcttgaagtc agtatagcat aaatatcatt taagaaaaag ccacttatcc cagaaatagt
    10801 ccaaaccacc atagctggaa gaatgaattt taatttgcca aatttatcca ttaaaatacc
    10861 agcaaatgga gataaaatga caacaaaaat agcagggatg gttaaaacta agcgaacaag
    10921 tatatcaaga tgagctaatg tgaaacttga agcaagagta gcgccacttt gggttaaaag
    10981 ttcttcaaaa tgtctgttga tagcaggcag agcagatgaa atgaccacac ttcctagcat
    11041 agtcatagca gccatagaaa acacagctac tttaaatccg gacttttcag taatttgaat
    11101 tattttttta tccatttttg tgtcatttgg atgaaattta taaattttgt cattcataat
    11161 ttttaccttt tttatt
//
LOCUS       DARATF010000054        10801 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.054, whole genome shotgun sequence.
ACCESSION   DARATF010000054 DARATF010000000
VERSION     DARATF010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10801
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.054"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..352)
                     /locus_tag="SB502_001155"
     CDS             complement(<1..352)
                     /locus_tag="SB502_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEG0434600.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLETIPSKRPKKLFYISVEAFYIEKEQLREIYQKL
                     EFYEEFKELLEQFLK"
     gene            complement(349..2328)
                     /locus_tag="SB502_001156"
     CDS             complement(349..2328)
                     /locus_tag="SB502_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEG0434601.1"
                     /translation="MAKIFVFLVFAFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVIHEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGSKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKIIFSKETTSQKKTGQVSKI
                     SEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNNNLTLGFYIQTTNQNANKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(2328..3419)
                     /locus_tag="SB502_001157"
     CDS             complement(2328..3419)
                     /locus_tag="SB502_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEG0434602.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(3416..4621)
                     /locus_tag="SB502_001158"
     CDS             complement(3416..4621)
                     /locus_tag="SB502_001158"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEG0434603.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDKIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(4633..6828)
                     /locus_tag="SB502_001159"
     CDS             complement(4633..6828)
                     /locus_tag="SB502_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEG0434604.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LESAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLARRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
     gene            complement(6812..7036)
                     /locus_tag="SB502_001160"
     CDS             complement(6812..7036)
                     /locus_tag="SB502_001160"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEG0434605.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDF
                     DKNKNKFADIALYEIAENKITLEGLVETNR"
     gene            complement(7047..7766)
                     /locus_tag="SB502_001161"
     CDS             complement(7047..7766)
                     /locus_tag="SB502_001161"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEG0434606.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSIVKNN"
     gene            complement(7818..9011)
                     /locus_tag="SB502_001162"
     CDS             complement(7818..9011)
                     /locus_tag="SB502_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEG0434607.1"
                     /translation="MRKNILIFFCFFLFVGISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLASQNEDLLKSKSN
                     MESKLISLMAKDFAYDLPIPQGYIESEESFVAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQIKKINDSLKDYNAQLVKLQSLKQKQISEINKQKTDRTIYAKKLDDLQAQ
                     QEELRKTLNQLKIINNKEGANLNKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(9008..9814)
                     /locus_tag="SB502_001163"
     CDS             complement(9008..9814)
                     /locus_tag="SB502_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEG0434608.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILVTNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNLIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(9801..10466)
                     /locus_tag="SB502_001164"
     CDS             complement(9801..10466)
                     /locus_tag="SB502_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434609.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQATKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
     gene            complement(10536..>10801)
                     /locus_tag="SB502_001165"
     CDS             complement(10536..>10801)
                     /locus_tag="SB502_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEG0434610.1"
                     /translation="EDLKKIEQNFKNITIKKDDFFLHFESIYKQDENLLLKVAFGAFN
                     KPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKAQFKI"
BASE COUNT         3500 a         2030 c         1257 g         4014 t
ORIGIN      
        1 attttaaaaa ttgttctaaa agctctttaa actcttcata aaattctagt ttttgataaa
       61 tttctcttaa ttgttctttt tcgatataaa aagcttctac gctaatataa aaaagttttt
      121 taggacgctt agaagggata gtttctaaaa agcgtttcaa agtaagaaaa aaatttaaac
      181 ctataccaaa accactctct gcgataataa aattttcttg atttttccat tcaaaagaat
      241 gagtgtaaac aaatttgctt tcatttaagc catctttgga attaaaataa aaatcatcaa
      301 aatccaaaga aaaaggagta ttatccttaa aaattagctt agcttttttc atcggttgtt
      361 ataaaaataa ctctcaactc catcggcaat acccttaacc aataaatctt gaaaagcttt
      421 attggcgatt cttttgcctt catttggatg tgtaatatag ccaatttcaa tcaaaattgc
      481 aggcatttgc gcacctacta aaacccaaaa aggtgcttct cttacaccgc catctacaat
      541 tttatacttt ttgcgtgttt gagtgagtat atttttttgt acatcaatgg ctagtttatt
      601 tgaagcaacg attttttcac gatttaagaa atttaaaata ctttgttttg agaaataatt
      661 aatctcttca aaatcccctt gattttcttt ttctgctgcc tttttacttc tttcacttct
      721 tgcaggactt aaaaagaaag tttccacgcc ttcgctactt ttggcttttg tggcatttgg
      781 tgctgcgtta gcatgtatag aaataaacaa atccgctctt ttatcattgg catatttggt
      841 tctatcacga agattgataa atttatccga acttctagta taaagcactt tataaccgcg
      901 ttttttaagt tcatttccaa gttttaaagc cgtacttaaa actatatctt tttcttttaa
      961 acttcctttt ttatcactta aagcaccgct atcttttcca ccatgccccg catcgataac
     1021 cacaagcttt cctgatttgt aatttgtatt taaagtttta ctagaacttt gagttgcttt
     1081 tttgtttgca ttttgatttg tagtttgtat ataaaaacct aaagtgagat tattattatc
     1141 caactccttt aaaagtttaa attctttagg agcactcaaa accacacgaa cggtttttgg
     1201 attgtattga gtaactgtaa tcacattttg tccaaaagta aagctttttc tattaccttc
     1261 taacacaccc ttaaaactta caacatatcg gaatttttga tctttggtat caaatactgc
     1321 tatttctttt tcatctaaat catcgcttaa atttaacacc acagcattag aaattttatc
     1381 cacatctaaa acatataaag gttcttgatt ttctttttca ttattggttt ttttatcttg
     1441 tttttttgtt tctaaaactt tggttttaat ttctgttttt tgatcttgct ttttctctga
     1501 aattttacta acttgcccag tctttttttg gctagtagtt tcttttgaaa aaattatttt
     1561 ttcttcttta aaagatatat caataggaat tttttcttta gcataaacca ctatgcgtat
     1621 ggttttggga ttaaattgtg aaatcactaa acgatagtca tcaaatttaa actctttttt
     1681 actcccttct aaaaccccat caaaatcact aataaaacga tagtttcctt tttcgtctaa
     1741 agcaaaactt tttaattgat ccttatccaa atctgcattt agttcaaact ctacaccttg
     1801 gtttgtttta cttgacttta aaacataaat tttatcatcg ctttttgctt tagaaacgat
     1861 actgctcttt ggtgcttgcg aagttttaga atttgttttt tctgtatttt ttatttgttc
     1921 gttagatgat tttttttcat ttttttgaac tgtttttata ggttcaaaag ttgatttttc
     1981 agtgtcttga gaaatatttt gaaccttaat atctttaata acagcctttc ttaaagcatt
     2041 aatacttgct tcacttatac cactttcttt taactcatta gcatatgact tgtcatctaa
     2101 atttaaagta tttgaactga tgatcaatct ttttaaaatt tcaattttag ttttttcatc
     2161 ttcatgaata acactttgta tataaaggct tttgagctga tggtgaaatt ttacttgcac
     2221 ttcactttta gaaccgataa aatttttatc aaaatttgca agttcatttt cataagctcc
     2281 aaaaagagtt gtgaaagcaa acactaaaaa tacaaaaatt ttagccatta ttcaccatta
     2341 accaattttt ccataagttc tttaacactg ataagcttat ctaaacgata tccatttgca
     2401 cctgtaaaga aaagtcctgt ttcttttttg cctgaccacg catcaaaaag cctatctgct
     2461 atacaatacc ctactttagt cgcctctttt ccacgtccac aaggcgctac acaattgctt
     2521 atacaattaa tctttggacc cattctttta tctaccaaat ttaaaagatt ggttctaact
     2581 ccacgagcag gatagcccac aggagattta ataagctcta tatcttcttc tttagaagct
     2641 agcaaaacgc ttttaaactc ttcactcgca tcacattcaa aagttcctat gaaacgcgtt
     2701 cccatttgaa caccactagc ccctaaagaa atagcatttt ctatatcttt tttatcccaa
     2761 attccacctg cagcaatcac gggaaaagac ccccaatttt tagcctcttc taccacagga
     2821 gcgattaatt tttctagctg ataatttgga tctaaacact gctcataagt aaaaccttga
     2881 tgacctccac tttttggccc ttctaaaacc actgcatcag gcaagcgatt gtaacggctt
     2941 tgccatcttt tgcaaataat ttttaaagcc tttgcagatg aaatgatagg cactaaagcc
     3001 acatcaggaa aatctgcagt aaattcaggt aaatttgtag gaagtccagc acctgaaaca
     3061 atcacattaa aaccaacctc acaagcatcg cgtgctattc ttgcataatc attacttgca
     3121 cataagatat tacaccccaa aggtgcatcg ccacaaactt ttcttgcatt attaatcaaa
     3181 gcttgcaaac ccttgcgtga gtaaaaattt tcacttccat aaggcttagc atttaattct
     3241 ttacttgcat actttctttc ttcataatat cctgttccca cagaagaaat aatcccaagt
     3301 ccaccattta aagaaactgc agaagctaat ctatcccagc ttatgcctag tcccattccc
     3361 ccttgaaaaa tgggatattt tatagtatgt tttcctattt gtaagggttg taaattcatt
     3421 cttttacctt taattttgca aattttcttt tacctatttg taagatgtat tctccttgtt
     3481 ctaaatacat ttgctcgtcg ctaacttttt gagaatttac acttactgca ttagcactga
     3541 tgcttcttct tgccgcagaa gtagaacttt ccaaaccaca ttcaaccaaa gccttagcaa
     3601 gccaaatttt tccttgtatt tcaaactcag ccatatcact tggcaaagca ttttgagaat
     3661 gaattttatc aaattcagac ttagcattat tagcctcttc tttggagtga aaacgctctg
     3721 taatctctaa agctaaattt tctttagctt ttttaggatg taaattgcct tgttctatat
     3781 ctttttttat ttgcgcaatt tcttctagac ttttttgact taaaagttca taatatctaa
     3841 acatcaattc atcactaata cttaaaattt tagcatacat atcattagct ttttctgtaa
     3901 caccaatgta attatttaaa ctcttactca ttttgtttac accgtctaaa ccttcgagta
     3961 aaggcatcat aatcacagct tgttcttttc ctatgttata aactctttga agctgtcttc
     4021 ccatcaaaag attaaatttt tgatccgttc cacccatttc aatatcgctt tttaaagcca
     4081 cactatcata tccttgaagt aagggatata aaaactcaca aatcgaaata ggactttgct
     4141 ctttaaatct cttggtaaaa tcgtcacgct caagcattct agctacacta aaagttgaag
     4201 taagctctac tatacccgcg gctccaagtt cattaagcca agtagaatta aacttaatct
     4261 gtgttttttc tttatccaaa accttaaaaa cctgcgtttc ataagtttta gcattgatta
     4321 aaacttgctc tttatccagc tttttacgcg ttgcactttt tccacttgga tcgccaattt
     4381 gtcctgtaaa atctccaatc aaaaactgca caatagctcc atgtttttgc aaaaaagcca
     4441 tttttgttaa aaccacgcta tggcctaaat gtaaatcagg cgctgtagga tcaaaccctg
     4501 cctttataaa gaaattttca cccttttcat aataattttt aattaaattt tctattcttt
     4561 cttcatcaat aagctctgca caaccacgct taacttctgc taatattttt tttatatcca
     4621 taataaacct ttttaacctt ctttataagc atcatttaaa gatgtaaaat ctaaaatttt
     4681 acaacgagat tttaacctat ccttgacact atctggattg atattatcag gaatttccat
     4741 tgtaatctca aaataatcta ccgccgaatt taaatcactt gataaattaa ttgttaataa
     4801 atttatctgc attttagcta aaaatgccaa aaattccgct aaaacacctt ttttattttc
     4861 caaagaaaaa atcaatttat aagatttagg gatgttagaa tcccatttta taaataccat
     4921 atcttgatta ttatctatca ttttatcagc tctatcgcaa agcttatgat ggacaatagc
     4981 gttaccacct ttaacaaaag ctaaaacagc atcgcctctt tttggatggc agcaaaaatc
     5041 aaaatccaca ttagcgattt tatggttaca atatagagta aaatttccta ttttttgttc
     5101 tttaatctca tatttatcaa accaatatga cttcttggcg tattttttaa gaccattaac
     5161 tatatctttc aaataagcac tatctgttgc tacttgtcta atacgtctgg ctaaattttc
     5221 tttttctatc caagtttcaa ttctgttttt atcaactcca aaaataaaac ttaacatatt
     5281 aatagaactt gctagattaa tctctctgat tttttgctta caaaattccc ttatacttgc
     5341 ttttgctttt cctgttttaa cactatctat ccaagaacag cgataaaatt tatcattgct
     5401 agtaaccact cgcacaatat cgccattttt aagctcggtt aacaaaggca ctttaatacg
     5461 atttacataa gcactttttg catgaagccc tactttggta tgcacttcat aagcaaaatc
     5521 aagaaccgtt gcaccacgag gcaaagtgaa aatttctccc ttaggagaat aaactgcgac
     5581 atcttcaaca taaagactat ctttagcata ttcataaagt tcaatagcat tataatcttc
     5641 tgcactttca agattgttta tactttgcat tgaaatatct gtaagccaat caagacgagg
     5701 cgcaaccaca ctgccatctt ctttatattt ccaatgcgct gctataccaa attccgcaat
     5761 tttatgcata tcaaaagttc gaatttgtgc ttctataata cttttagcat caaaaagtgt
     5821 ggtatgtatg gtttgataac cattttgttt aggcaaggct atataatcct taaaacgcga
     5881 aaccaaggga ttaaaatgtg tatgtaaaat tcccaaagct aaataacaat cacttacttt
     5941 ttcaaccaaa attcttaccc caagcaaatc aagaacttct tcaataccaa tgccttttct
     6001 ttgcatttta agataaatag aatagctatg tttaatgcgt ttttgaattt caaaactacc
     6061 ttgtctaaag ccattgctca aaaataaaag ttcgattttg gaaataaatt catttaaacc
     6121 taattgcatt tcttgattat tggagttgat ataattgtca ataagcttat actcatctgg
     6181 cataagatat ttaaaactaa gatcttccaa ataatttttt atgcttgaaa taccaagtct
     6241 atgggctatt ggggcatata caactaaagt ttcttcgctg attctttttt gcttatcttc
     6301 tcttagaata tcaagagtaa gcatattatg cagcctatcg cataacttca caatcaaaac
     6361 cccaacatct tcaatacttg ctaaaagcat atttctgaaa gtcaaggctg atttagttaa
     6421 acttttttta gattttgatg aaatgagatt atcttctcta atttctataa ttttagtaag
     6481 ccctaaaaca agttttaaaa cctcagaacc aaactgctct ctaagttctt cttcagtaca
     6541 gtttgtatct tcgatcacat catgcaataa agcagctaaa atattgcttt tattttcact
     6601 taaaaatcca accagtgttg ctactaaaat aggatgtacc gcataaggct ctccactttt
     6661 tctaaactgc ccttcatggc aaaatataca gtaatctacc gctttttcaa gaatggcatc
     6721 atggccacaa atttcgaaaa gcaaagcctt agcagcttct aaatctttac aattttttac
     6781 attatcgatt aattgttcaa gcaataattc ttcatcgatt ggtttcaact aaaccctcta
     6841 aagtgatttt attttctgca atttcatata aagctatatc tgcaaattta tttttatttt
     6901 tatcaaagtc taccaaaggg gttgctccgt tcgccaattg ttccgctctt tttgctacca
     6961 ctaaagaaag gcgatatcta tcattaccca ttttttccaa agcttttgcc gctacttctt
     7021 ctattctttt atccataatt ttctccttaa ttatttttaa cgattgaaca aaggctagta
     7081 tcaccttgta tgattttaag taaattaccc tcttcaaaca tattacaaac cacaatagga
     7141 agtttgttat ctttagctaa agctatagct gtatcatcca tcactttaat attatcttgc
     7201 atagcctcat cataacttaa agtatttaaa aatactgcat catcaaattg ttttggatct
     7261 ttatcataaa ctccattaac ttttgtagct tttattacca tatctgcatc aatttccaca
     7321 gctcttaaaa tagctgttgt atctgtagta aaataagggt ttccagtacc tgcggcaaaa
     7381 accacaacac gacccttttc taagtgtctt tgtgctcttc tcataatata agtttcacaa
     7441 aatgcttcca tctgaatggc gctttgaacc ctaacttcaa gtccagagct ttccaaggct
     7501 tcttgtatag caatagcatt gataaccgta gcaagcatcc ccatatgatc tccacttgtc
     7561 cttttaatca atccaccctt agcagcactt actccgcgaa taatattacc accgcctata
     7621 actatgccta cttctatttg attttttata agttctttaa tctctgaagc tatgaatttt
     7681 aaaatagaat tttctatacc aaagccattt tcacccgcta aagcctctcc tgaaaatttt
     7741 actaaaactc tttttctctc ttgcattatt tctccttatt taacttgaaa ttatatttta
     7801 aattccatta aatttagcta atttaagcta atgagttcca aaggattgat atgaaaattt
     7861 ttttgagtta cttcaaaagt aagatcattt tttattctac ccactacggc acctttttta
     7921 atattcttac caactttaat attaggagca atcttatcta aatgtgcgta tattgtatgt
     7981 atgccattat catgttcaac aataacaact cgagctaaca tactagtatc tttagcaaaa
     8041 actatttttc catctagcac atttttaaca actgcatcgc ttttattgct tcttaaaact
     8101 acattctcgt taaaaatttt aagattgtaa acaggatcaa cataatttcc aaatttttgc
     8161 ttcacagtaa aagaatccaa tggagctatg gttttttttc ctgtgtaacg cttgactgaa
     8221 cttccttgat agcttgaacc taattgcctt atttgttgat tattttttac tattttagta
     8281 tcatttttgt ttaaatttgc accttcttta ttattaataa tttttaattg atttaatgtt
     8341 tttctaagct cttcttgctg agcttgtaag tcatcgagtt tttttgcata tatggttcga
     8401 tctgtttttt gtttattaat ttcgctaatt tgtttttgtt ttaaactttg aagcttgact
     8461 aattgagcat tgtaatcctt aagactatca ttgattttct taatctgagc ttgtttatca
     8521 tcaataagtc tgcttactcc ctcataatct ttagaaattt taaaaatttc ttcatttaaa
     8581 actttgttta aactccctaa aatttcaaaa gccacaaaac tttcttcact ttcgatatag
     8641 ccttgaggaa taggtaaatc ataggcaaaa tctttagcca tcaaagatat aagcttactt
     8701 tccatatttg atttactttt aagcaaatct tcattttggc ttgcaagggt gtttaactct
     8761 tgattttgag ccttagcact tgcttcaagc ttagaagttt gtgaatttaa gctttcaatt
     8821 tgcaaactta aatctttcaa acttttttca ccatttaaaa tatcactagc caaatcttca
     8881 agttttttat ttagctgttc ttgtatgcgt ttattttctt ctaaactttt tgttttttca
     8941 tttatagcgt ttgctaaact tataccaaca aacaaaaaaa aacaaaaaaa gataagaata
     9001 ttttttctca tcttttaacc ttaaacataa ccgtatttac acacaacaag caaataaaca
     9061 aagtagctaa aaaaattaaa gtcaaatgta aaataaaatt aataggtgga aaaataatat
     9121 ctacagcctt taaactttct tggataatag aaagatcaaa aatttgggta aaaaaggcaa
     9181 gtaaaataac aaaagcaata aaacaatcaa ccacaaccac cttataaagc ataaaagatc
     9241 taaaccaaaa cggagctcca aataaacaca taatttcaat acgatcggta tgttcataaa
     9301 gccaaattct catctgtttt aaaaacaaaa caaaggcaag taaaataatg ataaacaaaa
     9361 ataaccaaaa aacaaatttc atcaaaataa gcaaagagta tatcttatca tgggttttgg
     9421 aaaaagtttc aaccttacta acacctacaa tatttaaaag ttgattttta atcaaattta
     9481 gttcattttg atcgggtaaa gaatttaatt ttaaagtata aaattttggc agagaatctt
     9541 ttaaaacttt caaattcttt tcagaaacat catttttcaa acgatcaatt aaatccttag
     9601 gatctaaaga ttcaagtcca gcaaaaaatg gtacttttgt ttttactaca ttctgatcaa
     9661 gttcagtttt gctgacaact ataatattat aatctttatt aacaagttct tcataatgct
     9721 ttaaagttgc atttgtaacc aaaataaatt caaaagcaaa catcataaaa agcaaaggta
     9781 aaattaaaga taaatgtgtt ttaaaaaatt tcattcattt ttccattttc tatattaaaa
     9841 cgacgataat ccactcttaa attactagga attctatgtg ttaccactat aacacaagtt
     9901 cctaaaagct ctctagcaga ctttaaaaga gtccatataa tatcagaaga atactcgtcc
     9961 aaatttcccg ttggctcatc gcaaagcaaa agctttggat tatgagctaa agccctagcc
    10021 atagcgacgc gttgttgctc accaccgcta agttgattag gcaatttatc tgctttaaaa
    10081 gttaaattta catgctttaa aagcttagta gcttgatcat ggcatacttt tttgctataa
    10141 cctttaatca ttaaaggcaa cataacattt ttttcaacac tatattcttg tacaagttta
    10201 taatcttgaa aaataatccc tattctttga cgcaatttta aaagttctaa atttccaatt
    10261 ttattcatca aagatccaca tacttcaagc ttaccagaaa taggttctaa atctccataa
    10321 aaagacttta aaagcgtact cttaccactc ccacttttac ccgtaataaa aacaaaatca
    10381 tcatccttaa aagcaaaact tgcttcttta ataactagtt catcataacc taaagtaagt
    10441 ttatttgctt ggattaaatt aggcatcctt tttccttaat ttcccttttt aaatttttaa
    10501 attatgcttt atttttgctt aattttcaag aaaaattata ttttaaactg agcttttaaa
    10561 atttctttta attcatttat cgctttaata ttttcttgaa ttttaaatgg ttctttaaaa
    10621 gcaaaatcga tcgttttatc aagatgcaaa taacaatgtt caggcttatt aaaagctcca
    10681 aaagcaacct ttaaaagcaa attctcatct tgtttataga tgctttcaaa atgcaagaaa
    10741 aaatcatctt tttttatagt aatattttta aagttctgct ctattttttt caaatcctct
    10801 t
//
LOCUS       DARATF010000055        10454 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.055, whole genome shotgun sequence.
ACCESSION   DARATF010000055 DARATF010000000
VERSION     DARATF010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10454
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.055"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(64..621)
                     /locus_tag="SB502_001166"
     CDS             complement(64..621)
                     /locus_tag="SB502_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEG0434611.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVP
                     AKTRDANAKAFDLGVKYATQAKPHS"
     gene            complement(618..1463)
                     /locus_tag="SB502_001167"
     CDS             complement(618..1463)
                     /locus_tag="SB502_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEG0434612.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1464..2588)
                     /locus_tag="SB502_001168"
     CDS             complement(1464..2588)
                     /locus_tag="SB502_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HEG0434613.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2597..2908)
                     /locus_tag="SB502_001169"
     CDS             complement(2597..2908)
                     /locus_tag="SB502_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEG0434614.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(2922..3791)
                     /gene="sucD"
                     /locus_tag="SB502_001170"
     CDS             complement(2922..3791)
                     /gene="sucD"
                     /locus_tag="SB502_001170"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEG0434615.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3801..4964)
                     /gene="sucC"
                     /locus_tag="SB502_001171"
     CDS             complement(3801..4964)
                     /gene="sucC"
                     /locus_tag="SB502_001171"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEG0434616.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTTEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(4965..5867)
                     /locus_tag="SB502_001172"
     CDS             complement(4965..5867)
                     /locus_tag="SB502_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEG0434617.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSSVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFDDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(5864..8068)
                     /locus_tag="SB502_001173"
     CDS             complement(5864..8068)
                     /locus_tag="SB502_001173"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEG0434618.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILAAFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFTSVDGKKEILKEGLKLEKNEI
                     LDATFMDVQKLQEFYAKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSNGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNIA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLKGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCSNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(8185..10428)
                     /locus_tag="SB502_001174"
     CDS             complement(8185..10428)
                     /locus_tag="SB502_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HEG0434619.1"
                     /translation="MRILFKDNEFFIDNDLLFLKLTLQRQNKELIADIKKLLLKDYDL
                     NIDGNLSINTKSEFYYFQGRASGELLDFNASISYKNKNLAYKIEDLNIRNITEIFKRV
                     NKRIELPQSLNLWVAYRAKGEFYHLDYLQGFIDFTKDNYYLDNISASGYVNNVKVRLD
                     DKMNAIEIPKLDLNLNKQKLDFVFNKAFYNGADLSSSKVYLYDLFDEKKVGIYLRIKS
                     DNLKFDEKLAKALEDYHFSLPFYQKSGKIKSDLELKIDFHDKGEISYSGILALENASI
                     SLADFNITKAFVKLNQNDLNIENASVKNGFLEADFNAKFDLQKQQGNFNTQISRLYFD
                     NGELLDLKNQNVEVKLDYSQNVNISIPQWNLILNFKDGLEANLSNPKILFSFSPLLKK
                     FGFIDAKNVYYKTLNFEDFNASVNDAYFKNNLLINGQTPYENDSFDIVKNKGIMEIHT
                     QSDTASAKISSNNKEIHLKNLSYIYRKGSNSSNSTFDISTNTQNISFGGANVALILPD
                     SNKTLAFDRVEADLKGNALDLKGSRGNAKFELYYSSNDVNLNVSNIDDNYLNEFLQKQ
                     AVQDGVFNLSIKGSGLEYFDGQIDFKNTYVKDLKGVNQLISFIDTVPSLLMFKSPTFN
                     QKGLSLYDGKIIFNRKKDLLSVLAINLNGDSVDIYGLGSANLRLNTVDFSLELKTLKS
                     ASEAISKVPILNYVILGKNQEISTNLKIDGSIDDPKFHTEILTDTLKTPFNLIKNIIQ
                     LPANLLN"
BASE COUNT         3321 a         2087 c         1288 g         3758 t
ORIGIN      
        1 atttaaattt tatttgcaat gtgtaaaatt ttagaagtta aattccgcat gatgcggaat
       61 ttattatgaa tgtggttttg cttgagtggc gtattttaca cccagatcaa aagctttagc
      121 atttgcatca cgagtttttg caggaaccat atgaagcata gtttctttta aaacatctaa
      181 atctatacat ttactcatat aagcagcaat tgcaagtgca acaactgatt gagtagccac
      241 atttcctacc tcatctttag ctatggtaat aatagggatt tcaaaaattt gccatttttt
      301 ataatcttca ctttcaggat gtactaaatt tggctctaca actataatac ctccttcttt
      361 tacaccccca cgaaaacctt tataaccctt atctgcagtc gaaagcataa aatctacttc
      421 cccttctaca gcataaggaa ataaaatttc tttatcatcg atgataatat ccaccttagt
      481 agggccacca cgcacttgtg aagtgtaagt agaagcctta aaagcttgac gaccttcttt
      541 aatggctgct tctgctaaaa tttctcctgc ggtgataaca ccttgtccgc cttcaccgcc
      601 aaatcttaat tgatatttca ttttaaagct cctaaatcca ccattctttt ttctttggct
      661 gcacgacgta cttcttcata agcgtggcag tattctggct gagaattatc ttcatgtaaa
      721 attcctgttg gaaatttatc ttttctttct tcaaaatcca tgctttcaaa tttagcttta
      781 tccacaacgc gatttttaat ccaatcaagc atagctacag cttcgcccat tttgtttttt
      841 ctgcctagat tgatatgaca atttgaaaaa acatctacaa aactataacc cttatgcgct
      901 aaagccttat aaattaaatt ttcaagctta ttagcttcga tcacattacc ccttgccaca
      961 aaagaagctc ctgcagcttt agttaattca cacgcatcaa aattagggtc aatatttcca
     1021 aattgagctg ttactgtata aaaacctttt ggagtagttg gagaagtttg agaattagta
     1081 agcccataaa taaaattgtt gattacaata tgagttaaat caatatttct gcgacaacca
     1141 tgtatagtat gatttccacc aattgccaaa gtatccccat ctccgcttac tacaataaca
     1201 tgtttactag gattggctag tttaatgcct gttgcataag ctattgctct accatgagtt
     1261 gtatgaactg tattacaatt tacataagaa ctcattctgc cactacaacc tatacccgaa
     1321 acaagacaaa catcatccat attccaacca agtttttcta tcgcgcggat aatacatttt
     1381 aaaacaacac catcgccaca tccccaacac cattgagtag gcattttatc tactcttaga
     1441 tattcatcat aattaaaagc catttatata ttctccttta ccttagcaat aatttcactt
     1501 ggagtgatag gacgaccatt tgcacggtgc aaactaataa aatcgcgacg cgaagttact
     1561 ctttcaatct cttcaagata ttgtcccata ttaagctcgc ttaccattac ttttttaaat
     1621 ttgcttacaa cttcagcgat ttttttctca gccactggat aaagagtaat cggacggaaa
     1681 agccccactt taatcccttg ctctcttaat ctttgtatag cttcttttgc tgaacgactc
     1741 acgcttccat aagcaatgat taaaaattca gcatcatcaa gcatatactc ttcataagta
     1801 caaatatctt cttgattgtt ttttatttta cctatgagtc tttccatatt ttttttcact
     1861 ataactccat cttcagttgg aaaacctata tctccatgat gaagtcctgt aacatgataa
     1921 cgataacctg taaagaaagg atttaaagtt gcaggctcat tttctcctgc tgcataaggt
     1981 ttataatcct ttttatcgcc ttcaaatttt ttacggttat atactttaat atcttttaaa
     2041 tcaggtaaaa ccgctttacc attcatgtgc cctacagttt catccataag taaaaatact
     2101 ggagtcatat atttttcagc taaattaaac gctctaatgg tttctgtata agcttcttca
     2161 agacttgcag gagcaatagc aatacttgca aaatccccat gagttggtgc tttagcttga
     2221 aacaaatctc cttgtgctac acgagttgga agacctgttg aaggaccacc tctcataaca
     2281 tttacaatca caagtggaat ttcagcaata aatgcaagtc ctatttgctc tgcttttaaa
     2341 gaaattcctg gaccgctact tgcagtcatg gattttactc cactcattgc cgcaccaata
     2401 gccacgctaa tacctgaaat ttcatcttcc atttgtataa aagttccatc atttgcagga
     2461 agcatatggc ttaattcatg agctatctca ctactaggag taataggata acctccaaaa
     2521 aatttacatc cacaatcaat cgcagctttg gcgattaaaa cattacctgt tgctataact
     2581 tctctcatta tttttcctat gctaattttt tgtatttgtt attttttacg gctacagctc
     2641 tatctttagc ctcagcagta agtttggcaa atttaaattc atctcttttt gccaccataa
     2701 tagcaaaatc agggcaatgt gtctcacact cggtacagcc tatacaggat tcagggtgta
     2761 ccacctctat catttgtcct aaaaccgcat gcacatcatc gcgcatagct aaaaccccag
     2821 cggggcaata gctaacacaa atattgcatg ctttacatct atgctcatct acccaaacag
     2881 gggtatcttt tggagctgtc atactcatgt tttttccttt attaacctaa tattttttga
     2941 atttcttcac caattaaagc cggagaatcc accacatgaa ttccatagct ttttaaagct
     3001 tcttttttag ctgcagcgct ttcatcagca cttcctacta tggcacctgc atgccccatt
     3061 cttttgcctt taggagcagt tgcacctgca atgaatgcta ccacaggttt gctaatattt
     3121 tctttaataa atttagccgc ttccacttcc aaactaccac caatttcacc tatcattaca
     3181 atagctttag tttcatcatc tttttggaat tcacttaaaa gttctttata agcaagacct
     3241 atgataggat caccaccaat tcctactgca gtagaaattc cataaccacc ttgaactacc
     3301 tgattagcag cttcataagt taaagttcca ctttttgaaa taagccccac gcaacctttt
     3361 ttaaaaataa aacctggcat aatacctaat ttgcattctt cagaagtgat aatacctgga
     3421 caatttggtc caatgatttt catacccttt ttattggcat attgcttagc aaacatcata
     3481 tcttttacag gcgtatgttc tgtgattaca actgcaagct taatacccgc atcagctgct
     3541 tcaatcacgc tatcacccac agcaaaagca gggacaaaga tcaagctcac atcagccttt
     3601 gttgctttaa ccgcatctgc aacggtatca aaaactggtt tacctaaatg agtttgtcca
     3661 cctttatgag gggtgacacc tccaactata tttgtaccat aagccatgca ttgctcagcg
     3721 tgaaaagttg cttctttacc cgtaaaacct tgaactatta cttttgtatt tttattaacc
     3781 aatatactca ttttctatcc ttatcctact aaacttttta caagctctgc accgttttta
     3841 agattggttg ctgctttgat atttttaaga tttgaattat ctaaaattgt ctttgcttct
     3901 gctgcgttag tgccatcaag acgcactaca attggaatat ttacctcaac attcttagta
     3961 gcttctaaaa ttccatttgc tatcctatca caacgaacaa taccaccaaa gatattgata
     4021 aatataactt ttacattctt atctcttaaa atgatttcaa aagcctttgc aacagtttct
     4081 ggagaagctc ccccacctac atctaagaaa tttgcaggtt ttgcaccact ataattaata
     4141 atatccatag ttgccattgc tagacccgca ccattcacca tgcaagctac atctccatct
     4201 aatttcacat agcttaagcc aaattcagcc gcttctcttt cagcaggatt ttcttcagta
     4261 atatctctaa gttcagcaat ttcaggatga cgataaagcg cactatcatc aaaactgcat
     4321 tttgcatcaa gggcataaaa atccccttct gtagttttaa ttaaaggatt gatttcaagc
     4381 atattcatat ctttatccat gtaaagctta taaagtttag ctatcataga aatgagtttt
     4441 ttgccttcat ctttatcaag tcctaaaact ctcgctactt caagtccatg aaacatttta
     4501 aaaccaattt gtggatcaat gcctactttt gcaatttttt caggactttc tttggctact
     4561 ttttctatat ccatccctcc ttcacttgaa gcgataatgg taatttgctc tgccattcta
     4621 ttaaacaaaa tagccaaata atactctttt actatattag cgccactttc tatataaagt
     4681 ttttgcacga gcttaccttc aggtcctgtt tgatgagtta ctaaattcat tcctaaaatt
     4741 ttacttgcgt aatcttttac ctcatctaaa ttcttagcga ttttaacacc accaccaaga
     4801 ccacggcctc ctgcgtgaat ttgagcttta actgcccaaa cactaccgcc taattcttta
     4861 gcattagcca cagcttcatc tacgctaaat gcaacttttc cctttaaggt agggatacca
     4921 ttgtctgcaa aaattgcttt tgcttgatac tcatgtatgt tcatttattc tcctttatat
     4981 tgatatttga ttaaagattt ttctaatttg tctttttctt gcaaactaag atccattttc
     5041 atgatttcaa tcacaccttc aagtcctaat cttgccataa ctcccaaggc tttgttttgc
     5101 actccaaatt ctccatgtaa aatcacactc ataggtaaaa actcgccact tcttatagac
     5161 tcaagcattc ttatacaagc actagcaggg gctaaataag ctgaagtttt aagatgtttg
     5221 attactttag ctccacctgt tttaacttca ttttccaaat catcaaattc ttcttcattt
     5281 aaaaattcgc ttatattttt atttttaaca cttgcgtaag attttaccaa aaccatatca
     5341 tcattatgaa aaccaataag tcttgtatcc acgcttgaca ttttgacatt aagttttttg
     5401 gcaagctcat acttaaatct tgcattgtct aaaactcccg ccatggctat aattttcttt
     5461 gatgaaaaaa tcccgctttc ataaagagta ttaagtagaa aatctacagg attagttaaa
     5521 ataataaaaa gcggatcttc tgtaaaatct ttaatttttt tagcacaatc aagcataatg
     5581 cttgtattta actgaagcaa ttcttctcta ctttgcccat cttttctagc aaaacctgca
     5641 ctaaaaagca ctatatctga atttttggta tgagtataat ctttagtgca aagtaaatct
     5701 atatttaaat ttaaagcagc tatactttga gtaagttcta gttcttttgc ataaagcaaa
     5761 tcctcattga tatctactaa aacaatttca tttgctattt ctcttaaaat caaagcataa
     5821 gctacgcttg aacctacatt gccagcccct ataacagtga ttttcatctt tgtcctattt
     5881 tttctaaaat agcgttaaaa gttgcacttg gacgcatgat tttatttgct ttttcatcat
     5941 caaatttata atacccaccc aaatccactt tcacaccttg tgcatcgtta aattcggctc
     6001 tgattttttc ttcattagaa gaaagctcta gggcaatatc tttaaaaaag ctttgaagct
     6061 ccatatcact tgcctgtctt gctaaatgat ttgcaaaata cattgctaaa taaaaatgac
     6121 ttgttctatt atcatcttct ttaacttttc ttgatggagc tttattattt tcaagccatt
     6181 cgcctatagc ctcatcaaga cattctgcta aaaccttagc tttatgattg ctacatttat
     6241 ttgcataaaa ttccaaactt gcttgcaaag ccaaaaattc acccaaacta tcccaacgca
     6301 gatgattttc ttcgactaat tgttctactt gtttaggtgc tgaaccccct gctcctgttt
     6361 caaacatagc tccacccttt aacataggca caacagaaag catttttgca cttgttccaa
     6421 gctctaaaat aggaaaaaga tcggttaaat aatcccttaa aacattaccc gtgatagaaa
     6481 taacatcttt accttctcgg attaactcta aacttcttaa acaagcttct tttggagtta
     6541 aaatggctat atttttaccc ttttctttta aacgattttg taccaaagtt atcatgattt
     6601 tattactagc tcttttgcta tctaaccaaa aaatagcttc ggctccacta agttctgatc
     6661 tttctatacc taaatcaatc caatttaaca ctgcatcaaa tttagcctga ttagctctat
     6721 aaatatcacc ttttctaacc ttatgttcta ataaaacttt accgttagaa actattttaa
     6781 aagttccttc ttctttagcc acaaaggttt tatcgtgcga tccatattct tgagcttttt
     6841 tagccattaa acctacatta gatacactgc caagttttga aggatttaaa gtaccatttt
     6901 tatgcaaatc ttcaataacc gcctcataaa tagttgcgta agtttgatca ggaattacgg
     6961 catttgtgtc cttttcctta ccttccttat cccacaatct tgcgccattt ttaagcattg
     7021 caggcataga agcatcaacg ataacatcgc ttggaacatg aagatttgta atgcctttat
     7081 ctgaatttac catagaaata tctgcagatt tagctaaaat ttcattgtat ttttttaaaa
     7141 tttcatcttt tttgcttgaa ttttcgatct tacttaaaag ctcacttaaa ccattatttg
     7201 gattaatgcc taatttttca aattcatctt gaaattcgat aaataattct ttaaaaaata
     7261 cttttaccgc ataaccaaaa agtataggat cacttacttt catcattgta gcttttaaat
     7321 gcaaagaaaa aagcacatca tcatctttgc ttgctttaat ttcttttgca taaaattcct
     7381 gaagtttttg cacatccata aaagtagcgt ctaaaatttc atttttttca agttttaagc
     7441 cctcttttaa aatttctttt ttaccatcaa cgcttgtaaa ttctatatta gccacacaat
     7501 cttgatcgat taaaaccgct ttttcattag agaaaaaatc cccttctttc atgtaagaaa
     7561 cacgagtttt tgagtttgga ttaaactcaa ccacacgata aggattgttt tttgcataat
     7621 cttttaccgc ttttgttgaa cgacgatctg aatttccttg tcttaataca ggattaaccg
     7681 ctgaacctaa aactttttga tattttgttt taatttgcaa ttcttcatca ttttttggct
     7741 catctgggta atttggtaac atgtaaccct tatcttgcaa ttctttaatc gccgccttaa
     7801 gctgaggaat agaagctgaa atatttgggg ttttaataag atttgcatcc gatcttttga
     7861 caagctcacc taaaagttct aaagcatctt cacatctttg ctcctctttt aaatactcac
     7921 taaaagcagc taaaatcctt ccagataaag aaatatccga ggtttttact cctatatgtg
     7981 ccctacttaa aaaagctttc actataggca aaaacgaata agtcgcaaga gctggcgact
     8041 catctgttaa ggtataagta atttgcattt ttagtccttt aaaatactta tttttatttt
     8101 catttttaag tatattacaa ataaaaaaaa atgcaagagt aagtttaaag tttgttttag
     8161 ttttcaaaca aactttaaat atttttaatt aagtaaatta gcaggaagtt gtatgatatt
     8221 tttaataaga ttaaaagggg tttttagggt atctgttaaa atttcggtat gaaatttagg
     8281 gtcatctata cttccatcta tttttaagtt tgtgctaatt tcttgatttt tacctaaaat
     8341 tacataattt aaaattggaa ccttggatat agcttctgaa gctgatttta aagttttaag
     8401 ctctaagcta aaatccactg tatttaatct taaatttgct gatcctaaac catatatatc
     8461 tacactatcg ccatttaaat taatagccaa aacacttaaa agatcttttt ttctattaaa
     8521 aataatcttt ccatcataca agcttaaacc tttttgatta aaagttggag atttaaacat
     8581 caataaactt ggtacagtat caataaagga aataagctga tttacacctt ttaaatcctt
     8641 cacataagtg tttttaaaat cgatctgtcc atcaaaatac tccaatccac ttccttttat
     8701 acttaagtta aacactccat cttgaacagc ttgtttttgt aaaaactcat ttaaataatt
     8761 atcatcaata ttgctaacgt ttaaatttac atcattagaa gaataataaa gttcaaattt
     8821 tgcatttcct ctagaacctt taagatccaa agcattgcct tttaaatcag cctctaccct
     8881 atcaaaagcc aaagttttat tagaatctgg caaaattaaa gctacatttg ctccaccaaa
     8941 actaatattt tgggtattag tagaaatatc aaatgttgaa tttgaagagt tggaaccttt
     9001 tctataaata taacttaaat tttttaaatg aatttcttta ttattagaac ttattttagc
     9061 acttgctgta tcactttgag tatgaatttc cataatgccc ttatttttta caatatcaaa
     9121 gctatcattt tcataaggag tttgaccgtt aataagtaaa ttatttttaa aataagcatc
     9181 attaacgctt gcattaaaat cttcaaaatt taaagtttta taataaacat ttttagcatc
     9241 gataaaccca aactttttaa gcaatggaga aaatgaaaat aaaatcttag gattactaag
     9301 attagcctca agtccatctt taaaatttaa aatcaaattc cactgaggaa tgctaatgtt
     9361 aacattttgc gaataatcta attttacttc tacattttga ttttttaaat ctaaaagctc
     9421 tccattgtca aaataaagcc ttgaaatctg agtattgaaa tttccttgct gtttttgtaa
     9481 gtcaaattta gcattaaaat cagcttctaa aaagccattt ttaacactgg cattttctat
     9541 atttaaatca ttttgattta attttacaaa tgcttttgta atattaaaat cagccaaaga
     9601 aatactagca ttctctaaag ctaaaatacc actataagaa atttcaccct tatcatgaaa
     9661 atcaatttta agctccaaat cacttttaat ttttccgctt ttttgataaa aaggtagtga
     9721 aaaatgataa tcctctaaag ctttagcaag tttttcgtca aattttagat tatcagactt
     9781 aatgcgcaaa taaatcccaa cttttttttc atcaaacaaa tcatatagat aaaccttact
     9841 agaacttaaa tcagcaccat tatagaaagc tttattaaag acaaaatcga gcttttgttt
     9901 gtttaaattt aaatcgagtt ttggaatttc aatagcattc attttatcat ccaagcgaac
     9961 tttgacatta ttaacataac ctgatgcact aatattgtct aaataataat tatctttagt
    10021 aaaatctata aagccctgca aataatctaa atgataaaat tctcccttag ccctatatgc
    10081 tacccaaaga tttaaactct gcggaagttc tattctttta ttaactcttt taaaaatttc
    10141 cgtaatattt ctaatattta aatcttctat tttataagct aaatttttat ttttataaga
    10201 gatacttgcg ttaaagtcaa gcaattctcc acttgctcta ccttgaaaat aataaaactc
    10261 gctcttagta ttgatactta aatttccatc aatatttaaa tcataatctt ttaataaaag
    10321 ttttttaata tcagctataa gttctttatt ttgacgctgt aatgttaatt ttaaaaacaa
    10381 caaatcatta tctataaaaa attcattatc tttaaataaa atacgcacat gattatcttt
    10441 tatatttaaa tttt
//
LOCUS       DARATF010000056        10449 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.056, whole genome shotgun sequence.
ACCESSION   DARATF010000056 DARATF010000000
VERSION     DARATF010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10449
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.056"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            25..1272
                     /gene="cmeD"
                     /locus_tag="SB502_001175"
     CDS             25..1272
                     /gene="cmeD"
                     /locus_tag="SB502_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_075443138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HEG0434620.1"
                     /translation="MFLALYPLAMLASNLHEFIALSQNNESYLIKQMQSEQANLDKEQ
                     AFRNYLPSLSLSSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREANLRVLESRE
                     KLSLLDKEQNKNYLALNAITLYFNTLSLEKILLANQQKVSFLKSTFERLQKFYDAGLS
                     PKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFLENPQQEKSQ
                     NYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAPFANLADQFL
                     EKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNKEELNYLDKS
                     LKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKAQSDLELAKN
                     EFEITKANYYFNAGIDLNSKVKE"
     gene            1269..2009
                     /gene="cmeE"
                     /locus_tag="SB502_001176"
     CDS             1269..2009
                     /gene="cmeE"
                     /locus_tag="SB502_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HEG0434621.1"
                     /translation="MKKILFLLLVFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNRAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVRLGDDFFYKIDQNGTELKGKISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            2012..5029
                     /gene="cmeF"
                     /locus_tag="SB502_001177"
     CDS             2012..5029
                     /gene="cmeF"
                     /locus_tag="SB502_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HEG0434622.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKINGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNELRKYNLNALDIANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLGK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKN
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(5053..5859)
                     /locus_tag="SB502_001178"
     CDS             complement(5053..5859)
                     /locus_tag="SB502_001178"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0434623.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(5860..6579)
                     /locus_tag="SB502_001179"
     CDS             complement(5860..6579)
                     /locus_tag="SB502_001179"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEG0434624.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCPKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVVNKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            complement(6579..6830)
                     /locus_tag="SB502_001180"
     CDS             complement(6579..6830)
                     /locus_tag="SB502_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434625.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            complement(6834..8279)
                     /locus_tag="SB502_001181"
     CDS             complement(6834..8279)
                     /locus_tag="SB502_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HEG0434626.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            8419..9582
                     /gene="ftsW"
                     /locus_tag="SB502_001182"
     CDS             8419..9582
                     /gene="ftsW"
                     /locus_tag="SB502_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEG0434627.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPDKALSKKIILAILIISFIFIIILPFLPSALATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            9579..>10449
                     /gene="murG"
                     /locus_tag="SB502_001183"
     CDS             9579..>10449
                     /gene="murG"
                     /locus_tag="SB502_001183"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEG0434628.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKEKFFLSSKGVVNQSKFDKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGAQFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQI"
BASE COUNT         3611 a         1636 c         1547 g         3655 t
ORIGIN      
        1 tttaaaaaat atttaaaatc agctatattt ttagctcttt atcccttagc aatgttagct
       61 tctaatttgc acgaatttat agcactaagt caaaataatg aatcctatct cattaagcaa
      121 atgcaaagcg aacaagcaaa tttagacaaa gaacaagctt ttagaaatta cctaccctct
      181 cttagtctaa gctcagctta tgtagccaac aataaagatc gcttcattat cgatccacaa
      241 gaaagtttat ttgctaaagt ttctcttaat tttttgcttt ttgatggagg tgctagagag
      301 gctaatttaa gagttttaga aagcagagaa aaattaagcc ttttagacaa agaacaaaat
      361 aaaaattacc ttgccctaaa tgcaatcaca ctttatttta acaccttaag tcttgaaaaa
      421 attttactag ccaatcaaca aaaagtatct tttttaaaat caacttttga aagattgcaa
      481 aaattttacg acgcaggact tagccctaaa gatgaacttg aaagcattaa ggctaaatac
      541 catttaagct tattagagct cagtcaaaat gaattaaaac ttgccaatat acaaaaagag
      601 attaaaattt taagcgatac agattttaaa gtgcaaggga atgctttttt agaaaatccg
      661 caacaagaaa aaagtcaaaa ctatgaagta atgatagcta aagaacaaat caatcttgct
      721 aaagaaagtg taaatttggc aaaagctgaa tattttccaa aattttatat tcaagataat
      781 tttaactttt ataaaaacaa ttataatcca aaagttccag ctccttttgc aaatttagcg
      841 gatcaattct tagaaaaata ttctcaaggt aatcaattta ttttaggtat ggaatggaaa
      901 atttttgatt tcaatgcaag ggctaaagaa gttgaaaaag agcgtttaaa tgttcaaata
      961 gccaatgcaa atgcaagatt tagcgagaga aaaaataaag aagaattaaa ttatttagac
     1021 aaaagtttaa aagttttaca agaacaaatt ttagctctta atcttagctt aaatgctgca
     1081 aatttagctt ttgaaagtgt agataaaaaa taccaagcag gacttgtttc ttatgtagaa
     1141 tatcttcaag ctttagaggc taaatttaaa gcacaaagcg atttagagct tgctaaaaat
     1201 gaatttgaaa ttactaaagc aaattattat tttaatgcgg gtatagatct taattcaaag
     1261 gttaaagaat gaaaaaaatt ctatttttac ttcttgtttt taattgcgcc tttggcgaag
     1321 aaatttacgc aagtttcaat gtagaagcat caaaacaaag caaacttgcc cttgaaagca
     1381 taggtttggt tcaaaaaatt cctgtagaaa ttggacaaaa agtcagcaaa ggagaacttt
     1441 tacttgctct tgatcaagaa agtgaaaaaa tagctcttca aaatgctcaa aattcttatc
     1501 aacttgccct tgtagaatac gaaaatacca aaagtaggat gcaaaaaatc aaagctgtag
     1561 aaaatgttat agacaaacaa agctatgaag atatgaaagc taagtttgat gctgctaatt
     1621 taaatttaaa cagagcaaaa atcaatatag cttattataa aaatatcatg gcaaaaaaag
     1681 aattacgcgc accttatgat gctattatcg caaacaaatt tatacaagtg ggcgaaggag
     1741 taggaggagt agctcaacct ttaatagaaa ttttttccta tccacaaagc aaactgattt
     1801 taagttttga tgaaaaatat aaagataaag ttagattagg cgatgatttc ttttataaaa
     1861 tcgatcaaaa tggtacagaa ttgaaaggaa aaatcagcct tatttatcca agtatagaag
     1921 taaaaacaag aaaaatttat gctgaagtgc aaactacaaa tctaacacca gggctttttg
     1981 gtgaaggtag aatcatcact aaagattaaa aatgtttaaa ctagctataa accgacctat
     2041 taccgtgcta atgtttttct tagctcttat gatttttggg ctaatctctg cttttagcat
     2101 gagtgtaaat ttatttccta atgtttccat acctcttata aaaatcacaa gcaagataaa
     2161 tggggattta aatttcgtag aatcaaaagt cactaaagaa atagaaaatg ctttaagtga
     2221 aatcgatgga gtaaagacca taacctcagc tgcatatgat aattttagtg taagtgtagt
     2281 cgagtttaaa ctgggtaaaa atcttgaagt agctgccaat gatgtgcgtg ataaaatagg
     2341 aactttaagc ctaccttcta agcctgaaat tgaaaaaatc agttcagatt ctggttctgc
     2401 tatttcactt tttctatatt ctaaagataa attacaactc atgcgtgaaa tcaatgacaa
     2461 aataaaacct tttttgcaaa gagttgaagg agtaggtaaa atcgaagcta aggggttttt
     2521 agaaccccaa attcgcatag aattaaaacc aaacgaactt agaaaataca atcttaacgc
     2581 ccttgatata gcaaatatca tcaaaagtca aaattttaaa caagccctag gcgaacttaa
     2641 caacaatcaa gataactata tcatcaaagg ctattttgaa gccacaaatt tagaagaact
     2701 tagcaatctt cgcataaaaa caggagtatt tttaagtgat attgctaata tttcaagcct
     2761 ttatgaagat gaaaaacaaa gtgctttata cgaaggtaaa gaaggggtgc ttttagaact
     2821 tggaaaaatc acaaattata acacccttga aatgattaaa aatgtcaaaa atgccttgcc
     2881 tattttagaa aaacaaattc caaaagatat aagcattaat atgctttatg ataaaagctt
     2941 aaatatccac aagcaccttt ctcaagtgat ttttgatatg gttttgggga tttttctaac
     3001 ccttgttatc gtgtttttat ttttaagaaa tttaagtgca actctcattg cttgcatagc
     3061 tatacctact tctatcattt caactttttt tattatcgat cttttaggct atgatttaaa
     3121 ccgcttaact tttatagctt taaccttaag cataggaatt tttatcgatg atgctatagt
     3181 agtgattgaa aatattgcta aaaaactaaa aacttatccg cctttacaag ctgctttttt
     3241 gggtatcaat gaaataggtt ttagcgtttt aagcataagt atagttttac tttgtgtttt
     3301 tatccctatt tcttatatga actctatatc agggcttttt ttcaatgcct taggcataag
     3361 cgttgcaagt gggatagtta taagcttttt ggtttctgta tttttaatac ctagtattgg
     3421 ggcaagattt ttaaatccaa aagaaaacaa gttttatgaa aaaacagaag ctttttttga
     3481 aaaaatagag caaaagtatg aaaatttact ctataaaatt ttacaaaata aagtaaaatt
     3541 tatcctagcc actcttgttt ttatagggct ttcttttgct ttagccactc gcatagggct
     3601 tgatttttta cctatggaag atgatagtga aattcaagtt ttgcttgaaa gcaaaaagga
     3661 tttaagttta gaagccatga aagaaaaaag tttaaatttg cttggaaaaa tcaaaaatga
     3721 tagcaatgtc aaatacgctt ttttacttgt aggctatgat gatgccaaag atgctacaaa
     3781 ggctaaaatt tatgttaaac ttaaaaattt agacgaaaga aatttaagac aaagtgccat
     3841 agtaagttta tatcgtcaaa aatttcaaga tgaaagttta aaaatcaaaa ttttagaact
     3901 tccaaagata gagggtgcag gcattgatga tcccgtgcaa tttttaatct taggagatga
     3961 tttaaacact ctaaaagaag ctgcttctca ggcaaaagaa attttaggca ctaatgcgcg
     4021 cattgtagat ataagcgata atgctaatgc tacaaaagat gaagtagcct tacacatcaa
     4081 caaagaaaaa gccaaacttt tagatgtcaa tcctcaatat atcgctgggg ttttagggta
     4141 ttctttctcg caacttagcg taggaagcat ggatagaggc aattcaaaag atgatattat
     4201 cctaagtttt gctccagaat ttaaaaaaaa catagaagct ttaaagcgca ttagcattaa
     4261 aaacaaccaa ggtataaatt tagaactttc aagcgtggtg gattttatat acagtaaaga
     4321 tttaaaaact atcaatcgtt acaataaaaa ccgctctgtg aaaatcacag ctggagtgaa
     4381 tgatctttcc ttaggagcgg tgcaaaaact tttactagat aatatggata aaattttaaa
     4441 taacaatcca agtcttagct atgctttttc aggctttatc aatcttttag gtgaaaccgt
     4501 gcaaggtttt gctatggcag tagcacttgc ttttgtttta atttatcttg ttttagccgc
     4561 actttatgaa agttttattc tgcctttaat catcatgata accatgcctt tagcctttgg
     4621 cggagcttct atagggcttt ttatcacagg gcataatttt tcactttttg tacttattgc
     4681 catcatctta ctttttggta tggtggggaa aaatgctatt ttactcgtag atgtagctaa
     4741 taaaaaatgc catgaaggtt tagatcccga taaagctctt ttaatcgctg gaaaatcacg
     4801 cttaagggct atattgatga caacttttgc tatgattttt gctatgctcc cacttgctct
     4861 ttcaaggggt gcgggctatg aagctaattc tcctatggca atagccatta tctttggact
     4921 tataagttcg actttgctta ccttactcgt agtacctgca ctttttaaat tttgttttaa
     4981 actagatagc aaattaagaa aaatttatga gagagaaaaa ttaaattaac caaaatgatt
     5041 aatttaattt ttttaagtat tattcttata aagtgctttt aagttatcat aggcgatttg
     5101 tattttttca aactgttctc ttgcgtaagc tttttctatt gcactttttc cttgatgaaa
     5161 atcaggatga taaagtttta ccaaaatcaa atatttttgt ctgatttcac taagatcatt
     5221 ttgcggagtg cattctaaag tattaaaata attactaaaa agcttagcta aagcattaaa
     5281 tttccatttc atattttctt tattgtgaat attttggcga aattttttat actcttcgcg
     5341 gtcaacttca aaattcacgc aatattttaa atgctcgctc tcatctgcaa aagcttcaaa
     5401 aagttcaagg gtattctcgt ttttatattc taaaattaga atatttgtca tttcattata
     5461 ttctatatta tgatcttgaa aataatttct tatataagta ataaataatt tttcattaga
     5521 gcttaacttc atcaaaattc tacccgcaac aaaatcaatc ttgataaaca acataggctt
     5581 aagcatatta ttttgctcaa aaattaatct aaaagtttta aaatgagcat cttgtaaatt
     5641 ctctatacct tcatttgtgc ttttacgata tttttgatct aaaactttta agaaataacg
     5701 gcgctgtgga atttcatttt cttcaaaaaa agaaaaaatt ttattttttc gtcctataac
     5761 ctttgtgaaa tttttggtaa tcaagtcttt aaaatactga aatacgctaa tatcatctgt
     5821 attaacattg atagtttcta aagtttgcac gatttgcatc tatttctccc ataaaacctc
     5881 attttcaaaa agctctttag tgccttttaa aatttcattg ggtgtataat cggctttata
     5941 agataaagat tgacactttt ttacaaaata cccaagataa atataatcta agttcatttt
     6001 tttagctatt tgtatttcat tgagcaaaga aaatttaccc aaagaaaaat acgaaaaatc
     6061 aggatcataa aaacaataaa tgcttgaaat tccatcctct aaaatatcaa tcaaatcaac
     6121 acaaacgagc ttatcttcta tataaaatgc aagctcatat ccaaaattca taaaaccatc
     6181 gacataaaga ttataatact gtttaaagct taaatcataa cgcttccagt tctttttttc
     6241 ttccataaaa cgatggtatt tatcatataa aaacaaatgt tcattgctta aattgggcgt
     6301 tctaagtata actttggtgt taatattttt atttacaacc cttctttcac ttcttgaaaa
     6361 attatattca ttaactaaaa ttctaagact taaacattca tcacaatctt tacaaatagg
     6421 gcgtgaaaaa tacctaccaa aacgacgcca acctcgtttt attagctcat tattgatttc
     6481 tttagggcaa ttttcaatgt atttatactc tattcttgaa cgtttatcct ttaagtaagg
     6541 acactgatct tcaagagtac aaaaaccaat ctcaagcatt aaattttctt aatatctgta
     6601 tttttgataa attcggaaaa ttcatcctgt agtttttctt gctttaagaa aatttcttgc
     6661 atttccttat ctatgtttgt ttcttgattt ttttcgcgaa tatctttagc tagtttttct
     6721 aaatttttta cacttgcacc actcttgctt gatttcttcg ctaattttga agtattggtg
     6781 ttagcttgca tttctttttt aatactttta agactgtcta aaaaatccat ctattattcc
     6841 ctactttctc gtattttttt aagcgtagca gctattgcag ctataacttc ttctttattt
     6901 tcttgatgac gatcttctgt tttttctaat aattcttgca tatgtgtttc tatgaaagag
     6961 gtgtctaaat acccccttct aaattctctt gtttttgtaa tggcaattaa aaatggtatt
     7021 gttgttctaa tatcatcaat cacaaattcc ttcaaagcac gctcaagttt attaaccgct
     7081 aaatcataac ttgttgcttt aataataagc tttgcaagca tggaatcata ataaggcggc
     7141 acagtatagt ctttataaat atgactatca accctaacag atggtccaag agctgggtag
     7201 tattctccta tttttccagg acttggaata aaatttttcc atacattttc agcagtaatt
     7261 ctagcttcaa tagcaaaacc cctaggttta atatcgcttt gttctaagtc caaaatttct
     7321 cctgctgcaa tacgaatttg tcttacaata agatcaatac ctgtaatttc ttcagtaatt
     7381 ggatgctcaa cttgaattct tgtattcatt tccataaaat aaaagcgatt ataatcatca
     7441 agcaaaaact ctatagttcc agcatttgta taacctacag ccttagcagc tgccacagct
     7501 gtaacaccca tggtttttct aagattatct gaaattccag ggcaaggtgc tatctcaatt
     7561 accttttgat gtcttctttg aatagaacaa tccctttcac aaagatggat aatatttccg
     7621 tagttatctc ctaaaatttg aaattctata tgtctgggat taactacata tttttccata
     7681 aatacttcat cattattaaa gtatgttaaa gcttctcttt tgcaagattc aaaggcattt
     7741 tcaagatctt gttctttatg aacaacgcga attccgcgtc cacctccacc acctgaagct
     7801 tttaaaataa caggataacc aatcttctca gcaaaaattt taatttcttc catgctatag
     7861 gaatttaatt tttcagtccc tggaacaata ggtatgccat ttttagccat taacttacga
     7921 gcgatatttt tatttcccat cttatggatt acttcagatt ttggacctat aaaaataatt
     7981 ccagcatctt cacaagcctt agcaaattcg taattctcac ttaaaaatcc ataaccagga
     8041 tggatcgcat cagcaccaca agccttagca atctcgacaa tacgagcaac atctaaatat
     8101 cctcttatag catccgttcc tatgcgataa gcctcatctg cgatttttac atgcaaacat
     8161 tcacgatcag gctctgtaaa aactgcaaca cttttaatat gtaaatctct acaagcacgg
     8221 attactctaa cagctatttc agctctattt gctatgagaa ttttatggat ttgattcata
     8281 atttgccttt tttgttatat ttttattgtt aattttagca aattttcctt acaaaaactt
     8341 agcaaaaaat ttaatttatt ttagttataa taaaactttt taaaatttta attccaataa
     8401 agaaaagtta taattataat ggttgctgat aaaagattat tttatttaag ttgtatttta
     8461 atcaccatag gaatagtatt ttcatactct cttacagctt ttactgttct ttttcttgac
     8521 tatagtgagt ttcatttttt tattcgtcag cttttttttg gaattagtgg catacttata
     8581 atgtttttta tttctcgatt ggaccctgat aaagcacttt ctaaaaaaat tattttagct
     8641 attttgatta tttcttttat ctttatcatc attttgccat ttttaccttc tgcattagca
     8701 acagctagcg gaggagctaa acgctggata cgcttaggcc cactctctat ctctcctgtg
     8761 gaatttttta aaataggatt gatttatttt ttagcatgga gctatacaag gcgtattgat
     8821 gatagcaaaa aagctatcag acacgaggct ttaattcttc tgccttattg catcttagct
     8881 tctatagtta taggatatat ttatatcact caaaacgatt taggacaaag cgtaatttct
     8941 ttctttttga ttctggcttt agcttttttt gcaggagcta gtaaaaggct ttttgctttt
     9001 ggaactttaa ttattatgat gataggtata atggtaattt ttagcaacca aagaagaatt
     9061 caaagaatcg cttcttggtg gggaaatata caagatgctt ttttacctat gcttcctgat
     9121 tggctggcaa atgctttaag agtaagtagc aacagcgagc cttatcaaat ttcacactct
     9181 ttaaatgcta tagcccatgg aggaatgttt ggcgaaggct taggacttgg aacttttaaa
     9241 ttaggctttt tgagtgaagt gcatactgac tttgttcttt caggaattac tgaagaaata
     9301 ggactcttag gtcttggggt tatttgctat atttatcttt ggatgatttt aagaattttt
     9361 agaattgcag gaagatgtga agctaaacaa gattttattt tttgttcagg catagcctta
     9421 cttttacttt tttctttctt tatgaatgct tttggtatta tttctcttac tccactaaaa
     9481 ggcgtagcgg ttccactttt aagctatgga ggaagttcaa tgtgggcaat ttgtataggc
     9541 ataggatatg tattaatgat ttcaaaaaag gttaaattat gacaatagct ttaacaggtg
     9601 gtggaactgg aggacatttg gccatagtgc gttgcttatt agaaagtgcg attaaaaaaa
     9661 atatagaatg tgtatacata ggcagtcaaa atggtcaaga taaagcttgg tttgaaaatg
     9721 aagtacgctt taaggaaaaa ttttttttaa gctctaaagg agtggttaat caaagcaaat
     9781 ttgacaaaat cagttctttg ctccacacct taaaactctc caaagattgt agagaaattt
     9841 ttaaaaaata ccacatccaa gccgttttta gtgtaggtgg atacagtgca gctcctgcat
     9901 cttttgcggc tttattctca catttgcctc tttttataca tgaacaaaat tcaaaaagcg
     9961 gctctttaaa tatgctttta aaacctttcg ctacaaaatt ttttagcgcc tttgaaaaag
    10021 aaattagccc ttatcctgta gcagataaat tttttgataa tgctaggatt cgcaaagaat
    10081 taaaaaatat tattttctta ggaggatcac aaggagctca atttatcaac gaactagctt
    10141 taaatttagc accaaaactt caagaacaaa atatcaaaat catccatcaa tgtggaaaaa
    10201 atgattttga aaagtgcaaa aaacattatc aaagcttaaa tatccaagct gatatttttg
    10261 attttagttt aaatttggaa gaaaaaatga aaaatgcaga tctagctata tcaagagcag
    10321 gtgcaagtac tctttttgaa ctttgtgcta atactttgcc cactattttt ataccttatc
    10381 cttatgcagc taaaaatcat caatacttta atgctaaatt tttacaagat caagctttat
    10441 gtcaaattt
//
LOCUS       DARATF010000057        10334 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.057, whole genome shotgun sequence.
ACCESSION   DARATF010000057 DARATF010000000
VERSION     DARATF010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10334
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.057"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..852)
                     /locus_tag="SB502_001184"
     CDS             complement(<1..852)
                     /locus_tag="SB502_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434629.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSRIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCVGKHHVLILNKKNIASITTLIFIGILSIILPRNT
                     TFNSAGLEFHFIALDFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFTAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYTKLILKQIAKILKRFRAKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFN"
     gene            complement(913..1122)
                     /locus_tag="SB502_001185"
     CDS             complement(913..1122)
                     /locus_tag="SB502_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEG0434630.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLHIEQTIQDEIAKFK"
     gene            1291..1518
                     /locus_tag="SB502_001186"
     CDS             1291..1518
                     /locus_tag="SB502_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HEG0434631.1"
                     /translation="MEGASGGSIFVTILLFVLYMLPAIIGLSRKHSNWLIISLLNLFF
                     GWTIIVWLVCLIWSFTGSFKQTIIIKEKNEK"
     gene            1527..2159
                     /locus_tag="SB502_001187"
     CDS             1527..2159
                     /locus_tag="SB502_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEG0434632.1"
                     /translation="MTKFLSICSLIAMLLSGCGSDFPGQPSDVARVQQNKYPNGNLKE
                     EIPYNKDSRIHGLKRAFYDNGQLRAEENYKNGKKDGISREYSRNGQLLEEVHFKDNRG
                     YGDFASYYENGNMRAKGKLLGYNEDGMPEFEGNYKEYYENGTLMCDYNFDNKGKFDGV
                     QKRYDENGALEDEENYKNGLKNGVFREYKKGEIVREEEYKNGILVAKPKN"
     gene            2172..2588
                     /locus_tag="SB502_001188"
     CDS             2172..2588
                     /locus_tag="SB502_001188"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434633.1"
                     /translation="MFKKVILFFLMGFALLQANSLDKCDNTAVVSNLKEKIPSEIFKN
                     LYELSGLKAQGIDYEDYAKGLKEIAKHDGMVNYTDMIEINSISNFDLNFDSCMATINA
                     ALKGEQRKGLWSVVYKVSNINQVKITDITYINGDFQ"
     gene            2718..4295
                     /locus_tag="SB502_001189"
     CDS             2718..4295
                     /locus_tag="SB502_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEG0434634.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADALFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEIKGIGKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDESRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGK
                     LTDFRGTYQEFLGENDG"
     gene            4285..4620
                     /locus_tag="SB502_001190"
     CDS             4285..4620
                     /locus_tag="SB502_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434635.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            4695..5078
                     /locus_tag="SB502_001191"
     CDS             4695..5078
                     /locus_tag="SB502_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434636.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQIEDYSSSGDSDFMDMLNK
                     ADEKSSGDALNSSSSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLAQQGANEQSKNNTLLNDLLNAI"
     gene            complement(5122..5706)
                     /locus_tag="SB502_001192"
     CDS             complement(5122..5706)
                     /locus_tag="SB502_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEG0434637.1"
                     /translation="MQTIDQIFQTQIDIKKSIFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL"
     gene            5833..7059
                     /locus_tag="SB502_001193"
     CDS             5833..7059
                     /locus_tag="SB502_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434638.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQGDKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            7052..7790
                     /locus_tag="SB502_001194"
                     /pseudo
     CDS             7052..7790
                     /locus_tag="SB502_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            8253..9765
                     /locus_tag="SB502_001195"
     rRNA            8253..9765
                     /locus_tag="SB502_001195"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            9868..9943
                     /locus_tag="SB502_001196"
     tRNA            9868..9943
                     /locus_tag="SB502_001196"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9901..9903,aa:Ala,seq:tgc)
     gene            9952..10028
                     /locus_tag="SB502_001197"
     tRNA            9952..10028
                     /locus_tag="SB502_001197"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9986..9988,aa:Ile,seq:gat)
BASE COUNT         3577 a         1355 c         1876 g         3526 t
ORIGIN      
        1 attaaattcc gtgtttttca aggtggattc taaaaaagca agatgattta aagcttgatt
       61 tttatcatta aaaattaaaa taaaatcatt ttctacgata aaaatttttg ctctaaagcg
      121 ttttaaaatt tttgcaattt gttttaaaat gagtttggta tagctttctt tggtatcttt
      181 tagttcatta aaatgaagca aggcaatgat atagttgttt tttccttttg taaagcgtgt
      241 aaggcttttt tcattgggta gctttgttaa ggtgtcaaaa aaagctaacc tataagcgtg
      301 atttaaaaga taaaaacaaa aaaccaaact tgcaaattca aaatatctta ttcctgctcc
      361 ttcttggaat aaaaattgaa aatacgcagt aaaaaatgcg ataagaagat aatattcttt
      421 agttttaaag gttttgataa aaatgagtat taagccgact aaaaaaaata aaaatcctaa
      481 ttcactcaca ggtttaaaaa aatctaatgc aataaaatga aattctaaac cagcactatt
      541 aaaagtagta tttctaggta aaatgatact taaaatgcct ataaaaataa gagttgtaat
      601 tgaagcgata ttttttttat ttaaaattaa aacatgatgt tttccaacgc aaaatagagt
      661 aaaaatcata ggtaaaaata aagctacaaa taaattagct tgaaaaaaac ttgtataaaa
      721 ataaggcaac ttagctccta atagcactaa agtcaaaaag aaaattcttg aatttttaaa
      781 gtaaaaggat aatacaagtg ctgaaatttc aaaaataaaa ctcaatgata ttaaaaaatc
      841 taataaaaac atttcaaatc cttgatttta ataaaagtga taattgtata gaaaaaagct
      901 taaaagtgga ttttatttaa atttagcaat ctcatcttgt atagtttgtt ctatatgaag
      961 caattcttca tgagtttttt tgctattttc taaaagttca tcaaatttaa agccaagcat
     1021 aacaatacga tataaattgg gtttatattt tctccaatta tataaagtgc taacatcaat
     1081 gtctagttca tatgccatat cacgcttgct cttttttgtc attttttacc ttaaaaattt
     1141 agcctttaaa aaattttaca ttaaaatttc tttattaaaa acacttgaaa tattcaatct
     1201 tttatataaa atatatttaa tatttcaata ttaattaagt tatagtatgg aataatagtt
     1261 tttataaaat ttttatttaa ggagaattac atggaaggtg caagtggcgg gtctattttt
     1321 gtaacaatat tattgtttgt attatacatg ttgcccgcta ttattggttt gagcagaaag
     1381 cattctaatt ggctgataat ttctttgcta aatttgtttt ttggttggac tattattgtt
     1441 tggcttgttt gtttaatatg gtcttttacg ggaagtttta agcaaactat tattattaaa
     1501 gaaaaaaatg agaaatagga gaaaaaatga caaaattttt aagcatttgt agtttaattg
     1561 cgatgttgtt aagtggttgt ggaagtgatt ttcctggaca acctagcgat gtggctagag
     1621 ttcagcaaaa caaatatcca aatggaaatt taaaagaaga aattccctat aataaagatt
     1681 caagaataca tgggttaaaa agagcttttt atgacaatgg tcagctaaga gctgaagaaa
     1741 attataaaaa tggaaaaaaa gatggaatta gcagggaata ttctagaaat gggcaattac
     1801 ttgaggaggt gcattttaaa gataatcgcg gatatggtga ttttgcaagc tattatgaga
     1861 atggaaatat gagagcaaag ggaaaactac ttggctataa tgaagatggt atgccagaat
     1921 ttgaaggtaa ttacaaggaa tattatgaaa atggaacttt aatgtgtgat tataattttg
     1981 ataataaagg taaatttgat ggagtacaaa agcgttatga tgaaaatggc gccttagaag
     2041 acgaagaaaa ttataaaaac ggacttaaaa atggagtctt tagagaatat aaaaaagggg
     2101 agattgtaag agaagaagaa tataaaaatg gtattttagt agcaaaacct aaaaattaga
     2161 ggagtttaga tatgtttaaa aaagtaattt tatttttctt aatggggttt gccttgcttc
     2221 aggccaactc attagacaaa tgtgataata cggcagttgt ttcaaatctt aaagaaaaaa
     2281 ttcctagtga aatttttaaa aatctttatg aattatccgg acttaaagcc caagggattg
     2341 attatgaaga ttatgcaaaa ggcctcaaag aaatagccaa gcatgatgga atggtaaatt
     2401 acactgatat gatcgaaatt aattccattt caaattttga tcttaatttt gattcttgta
     2461 tggctacgat taatgctgca ttaaaagggg aacagagaaa aggtctttgg agtgttgttt
     2521 ataaggtttc taacataaat caagtgaaaa ttacagatat aacttatatc aatggagatt
     2581 tccaataata tttttattaa agtaagtcaa tagaattaat ttcatgactt actaatattt
     2641 tatacttaat taatttcaag tctttttttg atacaatttc ttaaaaattt ttataagtaa
     2701 aaaatttaag gaaaatcatg gttgaagtaa aaaatcttac tatgcgtttt gcaaatcagc
     2761 ttttatttga aaatgttaat ttaaaacttg ttcgaggaca aagatacgga cttatcggtg
     2821 ctaatggtgc gggaaaatcg acttttttaa aaattctttc aggagaaatt gagtcaagta
     2881 gtggtgaaat agtatttgat gaaggcttga aaatcgcagt tttaggacag gatcaatttg
     2941 cttttgaaaa ctacaccatc aaagatgcag tgatgtgtgc aaataagcgt ttatatgagg
     3001 ccttaaaaga aaaagaaaag ctttatatga gcgaggaatt tactgatgag atcaatgagc
     3061 gtttaggtga gcttgagata ataacggctg aagaagatcc aaattatgat tgtgaaacac
     3121 gttgtgaaaa aattttaagt tctttaaaga ttaaagattt cgatgcttta atgagcacct
     3181 tacaaagtgc ggataaattt aaagttttgt tagctcaagt tttgttttta ggtgccgatg
     3241 cgcttttttt agatgagcct acaaataacc ttgatttaga ggcgatttct tggcttgaaa
     3301 atgaactttt aagacatgaa ggaactttgg ttgtcatctc tcatgatagg cattttttaa
     3361 ataaaatttg cacaagaatt ttagatgtgg attttaaaca aattcgtgat tttgcgggaa
     3421 attatgatga ttggtatatg gcttcaacgc ttttggcaaa acaagctgag cttaaacgcg
     3481 ataaaacctt aaaagaaaga gaagaattag aaaatttcat tcgccgtttt agtgcaaatg
     3541 cttctaaggc aaaacaagcc acaagccgtg ctaaggcgct tgaaaaacta gagcttgaag
     3601 agattaaaat ttcaagccgt agagatccta gtatagtatt tagaaccaat cgtgaaatag
     3661 gtaatgaagt tttagaaatt aaaggtatag gtaaggctta tgataaacaa ttgttttcaa
     3721 atttggagct aaaaatagaa aaaaatgata aaatcgcttt gattggggca aatggtgtgg
     3781 gtaaaagtac tttagcaaaa atcatcgccc atgctataag tccagatagt ggatctatac
     3841 atcttggggc aactatagaa cttggatatt ttcctcaaga tacaagtaat ttaatttgtg
     3901 aaaatttgaa actttatgaa tggctgatga gtgaaaaatt taaagatcta gatgaaagcc
     3961 gcaagtgttt aggtagaatg ctttttagtg gcagcgatca agaaaaaatg gcagcaagtt
     4021 taagtggggg tgaaaaacat cgtttaatgc tttctcgttt aatgctagag cgtccgaatt
     4081 tcttgctttt agacgaacct gataaccatt tagatcttga aagtattatt gcattaggtg
     4141 aagctttgta taatttcaaa ggtgtagtgc tttgtatcag ccacgatagg gagttagttt
     4201 ctgcttttgc taatagaatt tggcatttag aaaatggtaa gcttacagat tttcgtggaa
     4261 cttatcaaga atttttagga gaaaatgatg gctaaattta gaattcaata cagcgcaggt
     4321 tttgggcatt atacacaaaa tcacaagggt tttgggccta cgatttatat agaagaagtc
     4381 gtagagtttg ataatggcaa ggattatttt gactatatag atttttataa aacttattca
     4441 aagagcgatg atacttattt tcatatcagt tttttagaag atagacctct aagcgataaa
     4501 gaaatcacca ttcgtaatga ataccgcaaa atgcgtgatg aaaactgtaa aaaagccaag
     4561 gaagaattta tagccaataa tgagcttgat gtggagcatt tgcctactca ccatgattaa
     4621 aaaacattga tttttacata aaaaggaacg ctttttgctt gtatagtttt tgcatatttt
     4681 gaaaggagaa aactatgcag gtaaattata gaacgattag ctcgtatgaa tacgatgcta
     4741 ttagtggtca gtataaacag gtggataaac agattgaaga ttattcttca tctggagatt
     4801 ctgattttat ggatatgtta aataaggcgg atgagaagtc aagcggagat gctttaaatt
     4861 ctagcagcag ttttcaaagt aatgcgcaaa actcaaattc aaatttaagt aattatgctc
     4921 aaatgtcaaa tgtttacgct tatcgtttta gacaaaatga aggcgagttg tctatgagag
     4981 ctcaaagtgc tagcgttcac aatgatcttg cgcaacaagg tgcaaatgaa caaagtaaga
     5041 ataatacttt gttaaatgat ttattgaacg caatttaatc aaaagctcca ttttggagct
     5101 tttgtattta cttgcaagaa tttataattt ctctatttca aaaggtgcaa aatttttaca
     5161 aaaaatttca aattcttgct cctctttttc atttaatttg atatgtaata tagctttgca
     5221 atccttaaaa tcttttgtga aattaaaaga ataagttttt aaaaaatgtt caaaacgatt
     5281 taaatttttt aaatcaatag caatggttat attttttttc aattcaaatg aaagtaaaga
     5341 agaattattg atcacggcat ttgccgcatc gctataggct cttacaagtc cccctgtacc
     5401 aagttttata ccaccaaaat atcttacagt gattaaagcc gcattgataa gatcatagcc
     5461 ccttagaaca tttaaagttg gcattccaga agttccttta ggctctccat catcgctttt
     5521 atcttctaca atttgattaa aatcatttaa aacacgataa gcatagacaa aatgaacagc
     5581 ttttggatgt tcttttttta gcgtttctat taaaaattta aaatctttaa aagggcaaag
     5641 aaaagataag aaaatagatt ttttaatatc gatttgtgtt tgaaaaattt gatcaatagt
     5701 ttgcattttt gccttttttg tttaaaatta tacttataaa aactaaaatc aatttgatgt
     5761 taatttttaa gatatttgat atttatatga tttgcattga tattttaagt ttaattttgt
     5821 aaaattttca ttatggaaaa aatcaaaaat tataaactta tcatcatttt acttagtctt
     5881 gatttgttgg ctttgcttta tggaatttca acactgagta ttagtgctga tgaagctgat
     5941 atttattttg gtgagcaggg taaatcactt attttttccc atagtttgct ttattatata
     6001 tctcattttg gaacttttat ttttgggcaa aatgattttg gtttaaggct tcctttttta
     6061 ttttttcatt ttttaagttg tttgcttttg tatttgctag ctttaaaata tactaaaact
     6121 aaaattgatg cttttttttc tttattgtta tttgttttat tgccgggtac tgttgcaagt
     6181 gctttactgg ttaatgccgc atctttggtg atttttttaa cccttgctat attatgtgct
     6241 tacgaatatg aaaaaaaatg gcttttttat atattattga ttatagtatt atttgttgat
     6301 aaatctttta atattttatt tttaactttt ttcttttttg ggatttataa aagaaatgct
     6361 attttattta ccttatctct tgttttgttt ggagcgagta tcagttttta tggttttgat
     6421 acaggtggtc gtccaagagg ttatttttta gataccttag gaatttttgc tgcatgtttt
     6481 tctcctttgg tttttgtgta ttttttttat actatttatc gtttgacttt tcaaaaatat
     6541 aaaaatttat tatggttttt aatgagcgta acatttgtat tttgtttgtt gctttcttta
     6601 agacaaaaac tttttttaga tgattttttg cctttttgtg ttatttgcac tcctttgctt
     6661 ataaaaactt taatgcaaag ttatagggtg agattaccag tttttcgatt aaggtataaa
     6721 atctttatag aatgttctat aatttttttg atattttgtt actttttaat cgtcgctaat
     6781 caattattgt attattttat aaacaatcca aatcgtcatt ttgccaataa ttatcatttt
     6841 gctaaagaat tggcactaga attaaaaaaa caagatgttt tagaacttgc aacagcccca
     6901 agtttgcaaa aaagattgcg attttatgga ataaaaaata gcaataagtt ttatttaaaa
     6961 gctttaaaac aaggcgataa gcatgatatg gacaaaaaaa ttgttaaagt aaaacttgga
     7021 aaatatgaaa aagtatatca gattttaaac tatgattaaa gctttcagtt tgttggaatt
     7081 tgtgtttata attctcattt taggtatagt ttttaattta ggcagtcttt acttaaaaaa
     7141 aagacaatct actagaaggt gcaatacaaa ttcttaatga tatccaatat acccaaagtt
     7201 tagccatgat gcaagaaggc ataagagttg atgagttggc tatcgcaaaa agagagtggt
     7261 ttaaaagtaa atggcagatt tattttataa aatcagctgc cacaggttat gatcaaacat
     7321 atactatttt cttggataaa aatggcgatg gaaatgctaa tttaggtaaa actgaaatca
     7381 atatagatag agaaattgct gttgatgtaa tcaatcataa caaattaatg aattcaggtc
     7441 aaagtggagt tattagtaaa gatgatgaaa aaactacaca aagatttaat cttacaaaaa
     7501 gattcggaat agaaaaggtt gaattcaaag gatcttgttc aggatttact agattagtat
     7561 ttgatgaaat gggcagagtg tattctccgt taaaaaatgc caattatgca tatgaaaaaa
     7621 ctttagcaaa gaataattca gattgcatta tacgtttgtt atcaaaaaag catgctcttt
     7681 gtatcgttat agatacgctt agcggttatg cttatattcc agattttaaa acacttaaaa
     7741 gtcaatttgt taatataaaa aataaaaatt acgagtgctc taaaatatag cccccattat
     7801 acttatataa atacttacac aaatatttat actatttaat cctttgttta atacactttt
     7861 aagtttaatt ggttatactt tcatttcctt ttttgaaaaa aggacttaaa atcttttaaa
     7921 ttataaagtt tcactagctt agtagatttt ataaattaac tcttttggtt tttatcttat
     7981 aaactaaaag cttttttata aatcttgttt tttaatttaa aaacttttct tttaaaaatg
     8041 attttttgtt ttgttctttt aacttagtat tgttattcaa atcttattag tcaatctttg
     8101 aaatctaaat aagtgatcga ttgagccaga aagatttagg cataagtaat tatgtaaaat
     8161 ctattcaatc taataatgaa aaagattaaa agcttttctt ttaatctttc ataacttttt
     8221 ctttgaagaa aaagattaaa ctatctataa tttttatgga gagtttgatc ctggctcaga
     8281 gtgaacgctg gcggcgtgcc taatacatgc aagtcgaacg atgaagcttc tagcttgcta
     8341 gaagtggatt agtggcgcac gggtgagtaa ggtatagtta atctgcccta cacaagagga
     8401 caacagttgg aaacgactgc taatactcta tactcctgct taacacaagt tgagtaggga
     8461 aagtttttcg gtgtaggatg agactatata gtatcagcta gttggtaagg taatggctta
     8521 ccaaggctat gacgcttaac tggtctgaga ggatgatcag tcacactgga actgagacac
     8581 ggtccagact cctacgggag gcagcagtag ggaatattgc gcaatggggg aaaccctgac
     8641 gcagcaacgc cgcgtggagg atgacacttt tcggagcgta aactcctttt cttagggaag
     8701 aattctgacg gtacctaagg aataagcacc ggctaactcc gtgccagcag ccgcggtaat
     8761 acggagggtg caagcgttac tcggaatcac tgggcgtaaa gggcgcgtag gcggattatc
     8821 aagtctcttg tgaaatctaa tggcttaacc attaaactgc ttgggaaact gatagtctag
     8881 agtgagggag aggcagatgg aattggtggt gtaggggtaa aatccgtaga tatcaccaag
     8941 aatacccatt gcgaaggcga tctgctggaa ctcaactgac gctaaggcgc gaaagcgtgg
     9001 ggagcaaaca ggattagata ccctggtagt ccacgcccta aacgatgtac actagttgtt
     9061 ggggtgctag tcatctcagt aatgcagcta acgcattaag tgtaccgcct ggggagtacg
     9121 gtcgcaagat taaaactcaa aggaatagac ggggacccgc acaagcggtg gagcatgtgg
     9181 tttaattcga agatacgcga agaaccttac ctgggcttga tatcctaaga accttttaga
     9241 gataagaggg tgctagcttg ctagaactta gagacaggtg ctgcacggct gtcgtcagct
     9301 cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccacgtat ttagttgcta
     9361 acggttcggc cgagcactct aaatagactg ccttcgtaag gaggaggaag gtgtggacga
     9421 cgtcaagtca tcatggccct tatgcccagg gcgacacacg tgctacaatg gcatatacaa
     9481 tgagacgcaa taccgcgagg tggagcaaat ctataaaata tgtcccagtt cggattgttc
     9541 tctgcaactc gagagcatga agccggaatc gctagtaatc gtagatcagc catgctacgg
     9601 tgaatacgtt cccgggtctt gtactcaccg cccgtcacac catgggagtt gatttcactc
     9661 gaagccggaa tactaaacta gttaccgtcc acagtggaat cagcgactgg ggtgaagtcg
     9721 taacaaggta accgtaggag aacctgcggt tggatcacct cctttctaga gtacaaagta
     9781 ataagtctca caactattac ttcaatatat aaactcaatt gattcttgtt tagatttcaa
     9841 agattgatga taaagctaat tgtttatggg gaattagctc agctgggaga gcgcctgctt
     9901 tgcacgcagg aggtcagcgg ttcgatcccg ctattctcca ccatttatta agggcctata
     9961 gctcagctgg ttagagtgca cccctgataa gggtgaggtc acaagttcaa gtcttgttag
    10021 gcccaccata aaaaagattt gaataaagaa gctttaaaat ctaaagcaag tatataaaat
    10081 agattaaata taaactctat acttagattt atttttatct ttaactataa aagaatatac
    10141 tttaatagat ataagtagca tatacattat gcatttatat ttataatgat tatgttaata
    10201 tatatacttc ctttaggttt taaacctaaa tgttcttttt aattatcatt gttaagagtc
    10261 acaagcaagt tttaataaaa acaattttac aggacttgtt aaaggataaa acctatttat
    10321 cttttcttta gttt
//
LOCUS       DARATF010000058        10083 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.058, whole genome shotgun sequence.
ACCESSION   DARATF010000058 DARATF010000000
VERSION     DARATF010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10083
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.058"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..460)
                     /locus_tag="SB502_001198"
     CDS             complement(<1..460)
                     /locus_tag="SB502_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEG0434639.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNTLSILAKEQDLSKARAVATAAFRKASNTNEIFAHLKKEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFGKSFKSFDFGIISFY"
     gene            516..1289
                     /locus_tag="SB502_001199"
     CDS             516..1289
                     /locus_tag="SB502_001199"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEG0434640.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPINLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHAKLRQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNAL
                     FSNISHTAFGLKELNQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVK
                     PVVKIKEICELNIGQSIVARSVFTGLQNAILEMKELIKR"
     gene            1286..2380
                     /gene="pdxA"
                     /locus_tag="SB502_001200"
     CDS             1286..2380
                     /gene="pdxA"
                     /locus_tag="SB502_001200"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HEG0434641.1"
                     /translation="MKKLAISIGDINGIGLEILVRSHEELSKICTPFYFIHESLLDKA
                     SKLLNLKLFNAKIVAFKDGKDYEFNFVKKENSLEIYSFYLPLGFKVDENFEIKAGEID
                     TKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKMGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGRGVYLP
                     YPLVADTAFTKTGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAINLHSKA"
     gene            complement(2370..2972)
                     /locus_tag="SB502_001201"
     CDS             complement(2370..2972)
                     /locus_tag="SB502_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434642.1"
                     /translation="MKKIILLLGLSLASLGALSFDELIYKDEVKPSFDCSKIKYDGKS
                     DDELMICNKIGVRNEFDNKKLALVDNIYSSLYQNISKKADKKMKKDFKAISKKMLKER
                     KICIKNMQNTKAGENPILSLLNASDCMQEAYIKVLLELMQRAKKDTKTKEVLEQIFKN
                     KVDKYENLLTQSLNTNKDLQDFIDSLAKEDLIDSRAKFKL"
     gene            3085..4284
                     /locus_tag="SB502_001202"
     CDS             3085..4284
                     /locus_tag="SB502_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434643.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHTQLLINLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKILVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSITKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGIVLARLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSFTKV"
     gene            4340..4660
                     /gene="ciaC"
                     /locus_tag="SB502_001203"
     CDS             4340..4660
                     /gene="ciaC"
                     /locus_tag="SB502_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HEG0434644.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     DKKTNSSKFTNEDIDLGAVREDFRSYAWQKMREDQYKKNEETLLNKLFTTIDAGNATN
                     NTKA"
     gene            4844..5866
                     /locus_tag="SB502_001204"
     CDS             4844..5866
                     /locus_tag="SB502_001204"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEG0434645.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKSKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVGKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            5863..6765
                     /locus_tag="SB502_001205"
     CDS             5863..6765
                     /locus_tag="SB502_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEG0434646.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIISEVKVMLEKNVEFDFLTLTANGEPSLYPYLNELILSLRSIAKDKKL
                     LILSNGTAVLDEDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKV"
     gene            complement(6762..7958)
                     /locus_tag="SB502_001206"
     CDS             complement(6762..7958)
                     /locus_tag="SB502_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434647.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVTEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFCMQNDFLNFQKKIDVDSALDLLKEKFETTSQNLTKIS
                     HEKDRYLHLLEENLYQLVNISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHHKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKIFNKNVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNICINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKVRDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(7960..9762)
                     /gene="uvrC"
                     /locus_tag="SB502_001207"
     CDS             complement(7960..9762)
                     /gene="uvrC"
                     /locus_tag="SB502_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEG0434648.1"
                     /translation="MIKENLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFIATNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKLISREKYLEILDEAIHALLNPSVLLKNLEKQMLVLAQ
                     NENYEEAAKVRDQIAMIKDLEVKVEIDIAKLEDFEVFALAFKNSVLSTLRFVVQNGKI
                     ISANSKITPIRNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILS
                     QRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKFYFELENLPN
                     DIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFD
                     KIPPPDLWLIDGGKALLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHS
                     LKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVIQK
                     LLAYYGNFESIYKADFKDLTMLVGRKAAQKIKEN"
     gene            complement(9755..>10083)
                     /locus_tag="SB502_001208"
     CDS             complement(9755..>10083)
                     /locus_tag="SB502_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434649.1"
                     /translation="NHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVD
                     IKDIKIFSQKYTYAANKNKNDEKLSKNSYLELSKGEFKNCFEDKKLFKKFEDLRELIK
                     KGSNLD"
BASE COUNT         3540 a         1559 c         1407 g         3577 t
ORIGIN      
        1 cataaaaact aataatacca aaatcaaaac ttttaaaact ttttccaaaa gaaagctcac
       61 aagaagcccc tcctaaatca caatacgcaa actctcccca aattttaagc cttcttaaac
      121 ctgattgcat acctaaaaca ctgatcttag cttcactttt ggcatctata agcttaaaat
      181 caatcccaaa ttcttttttt aaatgggcaa aaatttcatt tgtattgctt gcctttctaa
      241 aagctgcagt cgctacagct ctcgctttgc ttaaatcttg ctctttagct aaaatactca
      301 aagtattttt taatctttgt atggcttctt tagaaatttc tccactttga tttagatttt
      361 tcgctgcccc aataacaaat tcatattctt ttaatttatt taatttttca tccatttgta
      421 ctgctcttaa agtatttgaa ccaagatcta tacctaacat gactttcctt atttgatttt
      481 atagtataat agcaaaaaag ttctaaagga aaaatatgct tttaggtgta aatatcgatc
      541 atattgcagt gttaagacaa gctagaatgg taaatgatcc tgatctttta gaagctgctt
      601 ttatagtagc tagacacgga gatcaaatca ctttgcatgt aagagaagat cgccgtcatg
      661 ctcaggattt tgacttggaa aatattataa aattttgcaa aagccctatc aatttagaat
      721 gtgctttaaa tgatgaaatt ttaaatttag ctcttaaact caaacctcac cgcgttactt
      781 tagtgcctga aaaaagagaa gagcttacta cagaaggggg gctttgttta aatcatgcta
      841 aattaagaca aagcatagaa aaacttcaaa atgcaaacat tgaagtttca ctttttatta
      901 atcctagttt agaagatata gaaaaatcaa aaattttaaa agcccaattc atagagcttc
      961 atacaggaca ttatgcgaat ttgcacaacg cactttttag taatatctct catactgctt
     1021 ttggcttaaa agaactcaat caagataaaa aaaccttgca agctcaattt gaaaaagaat
     1081 tacaaaattt agaactctgt gccaaaaaag gcctagaact tggcttaaaa gtagccgcgg
     1141 gacatggttt aaattacaaa aatgtaaaac ccgtagtaaa aattaaagaa atttgcgagc
     1201 taaatatagg acaaagcatt gtagcaagat ctgtatttac aggacttcaa aacgctattt
     1261 tggaaatgaa agaacttatt aaaagatgaa aaaactagcc attagtatag gcgatataaa
     1321 cggcatagga cttgaaattt tagtgcgttc tcatgaagaa ctaagcaaaa tctgcacacc
     1381 tttttatttt atccacgaaa gcttgcttga taaagcttca aaacttttaa atttaaaact
     1441 ttttaatgca aaaatcgtag cttttaaaga tggaaaagac tatgagttta attttgtaaa
     1501 aaaagaaaat tctcttgaaa tttactcttt ctaccttcct ttaggcttta aagtggatga
     1561 aaattttgaa atcaaagccg gagaaataga tacaaaaagt ggactttatg gttttttaag
     1621 ttttaaggcg gcaagttatt ttgtctatga aaaacacgcc catgccttgc ttactctacc
     1681 tatacacaaa aaagcttggg aagatgcagg acttaaatac aaaggacaca ccgatgcttt
     1741 aagggatttt tttaaaaaaa atgccattat gatgttaggt tgcaaagaac tttttgtagg
     1801 gctttttagc gaacatatac ctttagctaa ggtgagtaaa aaaatcactt ttaaaaattt
     1861 aagtatcttt ttaaaagatt tttacaaaga aacacatttt aaaaaaatgg ggcttttagg
     1921 ttttaatcct cacgctggag attatggagt tataggtgga gaagaagaaa agatcatgga
     1981 aaaagctata gcctttgtta atgccttttt acactctaaa aaagatgaaa aatttttcaa
     2041 aaaagcctta aaagatgaaa atttacaaaa agaattgctt ttaaatttta aaggcagggg
     2101 cgtttatcta ccctatcctt tagtggctga tacagctttt actaagactg gtttaaaaaa
     2161 ctgcaatcgt ttagtggcta tgtatcacga tcttgccctt gctcctttaa aggccttgta
     2221 ttttgataaa agcatcaatg taagtttaaa tttacctatc atacgcgtta gcgttgatca
     2281 tggcacggcc tttgataagg cctataaaaa tgctaaaatc aacactaaaa gttattttga
     2341 agcggctaaa tttgcaatca atttacattc taaagcttaa atttagccct agaatcaatc
     2401 aaatcttctt tagctaagct gtctataaaa tcttgcaaat ctttattggt atttaaactt
     2461 tgagtgagta aattttcata tttatcaact ttatttttaa aaatttgctc taaaacttct
     2521 ttagtctttg tatctttttt tgctctttgc ataagttcta ataaaacctt aatataagct
     2581 tcttgcatgc aatcacttgc attgagtaaa gataaaatag gattttcccc tgcttttgta
     2641 ttttgcatat tttttataca aatttttctt tctttaagca tcttttttga aatggcttta
     2701 aaatcttttt tcatcttttt atctgctttt tttgaaatat tttgatataa actactatag
     2761 atgttatcta ctaaagcaag ttttttatta tcaaattcat tacgcacacc aattttattg
     2821 catatcataa gttcatcatc acttttgcca tcatatttga ttttagagca atcaaaacta
     2881 ggttttactt catctttata aataagctca tcaaaactca aagcccctaa actcgccaaa
     2941 cttaaaccaa gcaataaaat aatttttttc attatttacc tttaaaattt ttattttatt
     3001 ttaacaaaaa tattttgaat tttttaagga aattaagcct ttattttatt ataatgcgtt
     3061 tttatttttt ataaggaact taaaatgcaa aattacaaaa aagctctttt tgcactagct
     3121 cttagtgctt tttgtatggg cgtaactgaa tttgttatgg caggagtttt ggttgatgtt
     3181 gaagcgtatt ttagcgtaga tgcaaaaacc gcgggctatc ttacaacctt atatgctata
     3241 ggtgttgtta taggtgctcc tcttatcacc atacctttaa gtcgttttca tagacataca
     3301 caacttttaa tcaatcttgg aatttttgct ttagcaaatt tcatcatctt ttttagccaa
     3361 aatttctatc ttactgcttt tgcacgcttt atagcaggaa cacaacatgg ggtatttttt
     3421 gtcattgcca ccttagctgt aagtgctata actccagatg ataaaaaatc aagtgctcta
     3481 gctataatgg tcacagggct tactgtagcc ttagttactg gagtgccgct tggaactttt
     3541 atagggcatt attttggctt taaatttatc tttttactca tttttatcat tacaagtcta
     3601 gcattttttg gagtatggca tatgatgccc aaaaatttac atcctagccc aaccagtctt
     3661 aaaaatctaa tccctgcttt ttctcatcaa aatttgttaa aaacttatac tataaccatt
     3721 tgtagttgtg gggctcaatt tgttctttat acttatttgc aaaaaatact tgtagaaata
     3781 agcggtttta aagtccaaga tacagcttat atcttgcttt tatatggaat ttgtgcaatt
     3841 tgtgggaatt tatggggcgg aaaaatagta gataaaaaag gtgctatttt ttctttgcgt
     3901 cttattttaa gcatacaagt tctagtattt ttaagtgtat ttctcaccat gcattctaaa
     3961 attttaatca tttttagcgt agctttgata ggattttttg ccttttcaac catacctgca
     4021 ctaaaaatgc ttagcattac taaagctaaa cgccatactt ataaagtcat agacagtaca
     4081 gtaagtgtga atgaagcagc ttttaatgta ggcatagctt tagcaagttt tttaggtggg
     4141 attgttttag caagattggg tatagaattt aatgctttat tttcagcact ttttgtaagc
     4201 cctgctttga tttttgcctt gctttttgcc aaagataaat taaattataa aaaatttcaa
     4261 agaaaaagtt ttacaaaggt ataaattgga atagaaattg cttgcttatt taatgtaaag
     4321 ttaaataaag gaggagaaaa tggtagtaga taatactcaa aaaacatcaa atgctatctt
     4381 tagcaccaca actaaagtta aagaaaaaaa tacttcggca gatgaatttc aagccacatt
     4441 aaatgaagta aaaaacaaag aagaaaagga agataaaaaa acaaactcaa gcaaatttac
     4501 taacgaagac attgatcttg gtgctgttag agaagatttt agatcttatg cttggcaaaa
     4561 aatgagagaa gatcaataca aaaaaaatga ggagactttg ctaaataagc tttttactac
     4621 aattgacgca ggaaatgcca caaacaatac aaaggcttaa tatacaaatc aatcaaaact
     4681 caaactacat aaacgagaat tccaataatt ctcgtaaaat ttctaataac tctggataaa
     4741 atgaaaaaat ttattatttc ctctatatga agaaaatata gaaaaattga ccaatttaat
     4801 ttatcaaatt ctgttataat tttgctaaaa acaaaggaaa ataatgattt ttatcgatgc
     4861 ttgctttaaa aaacctacac cctacacccc tatttggatg atgcgtcaag caggaaggta
     4921 tttgccagaa tatatggaag taagaaaaca agcgggtgat tttctctctt tatgcaaaga
     4981 ctataaaaaa gcttctgaag tttctttaca gcctattgat attttagatg tagatgcagc
     5041 aatcattttt tcagatatct tagttgttcc tcttgaaatg ggtatgaatt tacgttttga
     5101 aaaaggagaa gggcctgttt ttgataatcc tatttcaacc ctagaagatt tagaaaaact
     5161 tgacgatcaa aatgcacata aaaaattaaa ttatgtctat gatgccttaa agcttacaag
     5221 agaaaaatta tctcaaaaca aggctttaat aggattttgc ggaagccctt ggactatagc
     5281 tacctatatg atagaaggaa gtggaagtaa aaattatgca aagtgtaaaa aaatgcttta
     5341 tcaaaaccca gaacttttac ataaaattct aaacaaacta actcaagttt taaaacttta
     5401 tttagaagag caaattaaag caggtgctaa tgctatacaa atttttgata gctgggcaag
     5461 tgctttagaa tatgataagt tttttgaatt ctcttttaat tatatgcttg aaatttcaaa
     5521 ttttattaaa agcaaatacc caaatatacc tgtaatttta ttccctaaag gcattagcgg
     5581 ttatttggat agaatcgatg gtaattttga tgtttttgga gttgattgga gcactccgct
     5641 tgatttagca cgtgataaac tatcgcacaa atacactctt caaggcaaca tggaaccttg
     5701 tagactttat gataaaaatg ccatcaaaga aggagtcgga aaaatactaa aaaccatgca
     5761 aaataaagct catattttca acttaggaca tgggatcttg cctgatattc ctgttgaaaa
     5821 tgcaaaatat tttatcaagc ttgtacaaga aagttcagct aaatgaaaat actctttggt
     5881 cctgttagct caaggcgttt tggaagatct ttgggtatag atttaagccc tagtaaaaaa
     5941 caatgcaatt ttgattgtgt ttattgcgag cttgatccaa aaaaagccca agaaaaacag
     6001 gatgaaatta tcagcataga taaaattatc tccgaagtta aagttatgct tgaaaaaaat
     6061 gttgaatttg attttcttac ccttactgcc aacggagagc ctagtcttta tccttattta
     6121 aatgagctta ttttatcttt acgcagcatt gctaaagata aaaaattgct tattttaagc
     6181 aatggtacag ctgtattaga tgaagacaaa tttaatgctt tgctaaaact agatgtggtc
     6241 aaatttagcc tggatagtgc agttgctaaa actttttatc gtattgatag agctttaaaa
     6301 aacattgact tagaaaaaat gatagaaaaa atggcagatt ttagagctag gtttaatgga
     6361 gatttgatta tggaaattct agttgttaaa gatcttaatg acaacgaaga agaatttgaa
     6421 gcacttaatc aagctttaaa aaaaatcatg cctttaagag ttgatctaag caccatagat
     6481 agacctcctg cttatgctgt taaaaaagta agcgaagaaa aacttttaga actttctaaa
     6541 cttatagatt ctactcccgt actcttagcc aaaagacatt atgaaggtga aaaactaagc
     6601 ttcaatgaag aagaattatt aaaaatgctt catttgcgct cacaaagcga aatagacatt
     6661 gaagtgaaat ttgatgaaca atccaaaact ctcttaaatc aacttatcaa agaaaaaaag
     6721 gtaaaaattc tcgatttagc tggagttaaa ttttataaag tttaggcctt tggcaaatac
     6781 tttctaagta aagttataag atcatttcta cttacatcac ttaaaacttc gctcacacaa
     6841 tcaaaatccc taactttttc ctttgaaaaa aagatgatat ggctttgtgg atgctgtttt
     6901 ttataagcac ttagcaaatt tctcatttgc tcaagatcaa atttaattaa ttcataatca
     6961 agtaaaatca aacgataagt ctccttgctt aattcttgtt ttaattgact aaaagaattt
     7021 atacatatat ttttatcaca ttgtttttct attatattaa aaaacaaggt tgcatcaaaa
     7081 tcattttgtt taaaaagcaa tacattattt tgataagggg ttttaaattt taaagtgcaa
     7141 accttatcaa gcttgttttg caaaatattt tcaagatctt ttttttcaaa aggtaaagtt
     7201 aaaaaatact cataatgtgt atttttatgc cgacccatca ctataaaatc ataatttttc
     7261 tttacatttt tattgaaaat tttatccttg ataaaaatca aatgaaagtc attaacatca
     7321 aaacttaaat ttttaaaaca agtgctttct atgccaaaat acgaaagtaa atttgcaagt
     7381 aaaaaattct caagctcatc attattaact atggccacac ttgcttcaaa ttgcaaaacc
     7441 tttccatgag atgttcctat aatgctttta tgatgctcta aagcctcatt taattctaat
     7501 ctaatttgat ctttttgaga atttaaggca tttaaaatca aagaattaat ttctttatta
     7561 tacccttcat ttaagcaacg cattgcatta gatatattta caagctgata taaattttcc
     7621 tccaataaat gcaaatatct atctttttca tgggatattt tagttaaatt ttggctcgta
     7681 gtttcaaatt tttcctttaa caaatcaagc gcactatcaa catcaatctt tttttgaaaa
     7741 tttaaaaaat cattttgcat gcaaaaaatt ttttgatata ttttgtttat atttctattt
     7801 tgcctaaaag caaaaataaa aagtgttaaa gataaaacaa aaatgctaga aaacatacct
     7861 attttcagtt gttcagtaac actatcaagc tttgagatat caatacttaa atacgctaaa
     7921 attagattaa aaataaaaat tatccctgct aatatcaaat caattttcct ttatcttttg
     7981 cgccgctttc ctgcctacaa gcattgtaag atctttaaaa tcagccttat atatagattc
     8041 aaaatttcca taatacgcta aaagtttttg tataacccct gaactaagtc ctaaatttgc
     8101 aagcttagaa cttttcaagt cctgtttttt cttagtattt tgatgaaagc tgatagcaaa
     8161 acggtgtgct tcatctctta atttctgtaa gaattgtagt tttttatcgt taatgcttag
     8221 actaaattct ccttttaagg aatgaatttt atccttagca ccccctttag ctctatgtgc
     8281 ttttgcatcg attttttctt ttgaaatagc taaaatatcg acatttgccc cactacttac
     8341 aatgatttct ttagccaaat caagcaaagc ctttccccca tctataagcc ataaatcagg
     8401 aggaggtatt ttatcaaagt ccaaagccct acgcgttaaa acttcacgca tttgatcata
     8461 gtcattttta tgttttaaat gaaattttct atattttgac ttatcccaag aatttattct
     8521 ataagttacc atagctccaa catttgccac gccttgcaaa tgagaattgt caaaaatttc
     8581 tatatcattt ggtaaatttt caagctcaaa ataaaacttt aattcttttt gtatagtaaa
     8641 atcatgattt ttttgctctt tttctatatt taaaagggca ttttgaaaag ccaaatcaca
     8701 aattcttctt ttttctccta ttttagggat tttaatactg atttttttat caaacctttg
     8761 gcttaaaatt tcttctaaaa gcactctatc ttcaaattct tcataaacat aaataacatt
     8821 tgcaagcaaa ggaatatcca tgctaaaatt ttctaaaatc agttgcttat aaatttcatt
     8881 ttgatcccat tgtatatcat ttcttatagg agtaatctta gaatttgcac tgataatttt
     8941 tccattttgc accacaaaac gcaaggttga aagcacggaa tttttaaaag ctaaagcaaa
     9001 tacttcaaaa tcttctaatt tcgcaatatc tatttcaacc ttaacttcca aatctttaat
     9061 cattgcaatc tgatctctta ctttagctgc ttcttcgtaa ttttcatttt gtgctaaaac
     9121 aagcatttgt ttttctaagt ttttaagcaa aacactagga tttaaaagtg cgtgtatagc
     9181 ctcatctaaa atttcaaggt atttttccct gctgatgagt ttatcacaag gtgcaagaca
     9241 acgagaaatt tgataaaaaa tacaagggga tttacaactt gctttttgct ttaaaggata
     9301 gtataaataa agcgcatcta aaagctctct agcgccttta aaaaaagggc caaaatattt
     9361 aattttgctt ttttttacta attttctagt gatctcaaag cgtggaaatt cttcttcaaa
     9421 atccacataa atataaggat aagttttatc atctcttagc aaaatattat attttggatg
     9481 cagttgtttg ataaaagaat tttctaaaat caaagcatca gcctctgaat tagtagcaat
     9541 aaattccaaa tgcactgttt cttcaatcat tttttgaatt cttaaagaat ttcttggatt
     9601 tgcatgtaaa tttggagtaa aggcaaaata agatttgaca cgatttttaa gatttttagc
     9661 cttgcctaca tataaaagct ttccttcttg attaaaatat tgatacactc cagcactatt
     9721 gggaagagtt tttaactcat tttctaaatt ctctttaatc aagattagaa ccttttttta
     9781 taagctctct taaatcttca aatttcttaa ataatttttt atcttcaaag caatttttaa
     9841 attcaccctt agaaagctcc aaataagaat ttttagagag tttttcatca tttttgtttt
     9901 tatttgccgc ataagtgtat ttttgagaaa agatttttat atcttttata tcaacaaatc
     9961 cacttaaagg atatttctgt ccatatgctt ttatgagaaa tttaatataa attttgctat
    10021 catcatgatt taattcttga taagctgctg gatgtaaggt tattatattt aaaatatgat
    10081 ttt
//
LOCUS       DARATF010000059         9987 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.059, whole genome shotgun sequence.
ACCESSION   DARATF010000059 DARATF010000000
VERSION     DARATF010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9987
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.059"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            8..589
                     /gene="plsY"
                     /locus_tag="SB502_001209"
     CDS             8..589
                     /gene="plsY"
                     /locus_tag="SB502_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEG0434650.1"
                     /translation="MYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNVLRVVKEKNP
                     KLAKKLAIATIILDFAKAAIPLLILKFLHYDQALLWSVAVLAIFGHCFSIYLLFEGGK
                     GIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVISSFIFNYDLEI
                     HTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            574..891
                     /locus_tag="SB502_001210"
     CDS             574..891
                     /locus_tag="SB502_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEG0434651.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLK
                     KKY"
     gene            970..1641
                     /gene="hsrA"
                     /locus_tag="SB502_001211"
     CDS             970..1641
                     /gene="hsrA"
                     /locus_tag="SB502_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HEG0434652.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1754..1999
                     /locus_tag="SB502_001212"
     CDS             1754..1999
                     /locus_tag="SB502_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEG0434653.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            1999..3459
                     /locus_tag="SB502_001213"
     CDS             1999..3459
                     /locus_tag="SB502_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEG0434654.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDSYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3456..4253)
                     /locus_tag="SB502_001214"
     CDS             complement(3456..4253)
                     /locus_tag="SB502_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434655.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTVNNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVIFDHANKRYTMIIGNSNV
                     LLESVEIPEEQTIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4254..4562)
                     /gene="fliN"
                     /locus_tag="SB502_001215"
     CDS             complement(4254..4562)
                     /gene="fliN"
                     /locus_tag="SB502_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEG0434656.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4562..4984)
                     /locus_tag="SB502_001216"
     CDS             complement(4562..4984)
                     /locus_tag="SB502_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HEG0434657.1"
                     /translation="MLKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEG
                     ECNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
     gene            complement(5055..5804)
                     /locus_tag="SB502_001217"
     CDS             complement(5055..5804)
                     /locus_tag="SB502_001217"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEG0434658.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSETFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGMDIHSVFKLLARIKIKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIFKK"
     gene            complement(5797..6975)
                     /gene="trpB"
                     /locus_tag="SB502_001218"
     CDS             complement(5797..6975)
                     /gene="trpB"
                     /locus_tag="SB502_001218"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEG0434659.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELEGAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            complement(6972..7571)
                     /locus_tag="SB502_001219"
     CDS             complement(6972..7571)
                     /locus_tag="SB502_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEG0434660.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGLIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQNVFVW
                     QVISVENSLDLKSEIFANLVLFDAKGILKGGNGISFDWTLLGSYTKDFALAGGIGLDN
                     IHKAVQTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            complement(7558..9159)
                     /gene="trpD"
                     /locus_tag="SB502_001220"
     CDS             complement(7558..9159)
                     /gene="trpD"
                     /locus_tag="SB502_001220"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEG0434661.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDAISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCRENELFSNLPSNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKPQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQLAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALNITTPNTLESVL
                     KQLNNQGLSFLHAPFFHPLVGELKEVRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYDNAKDLKDILSGRMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DMILEAIYSGKVIEYFKEYQAYAKA"
     gene            complement(9156..>9987)
                     /locus_tag="SB502_001221"
     CDS             complement(9156..>9987)
                     /locus_tag="SB502_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEG0434662.1"
                     /translation="EILNSLEDEKNDFLKMCEKAKEYLLSGDIFQVVLSKQLCIKHQV
                     NAFDYYESLSALNPSAYMFYFPSKYGVVLGSSPEFLLKIKKREIYLAPIAGTRNLENN
                     CDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGTQTRVENLFSIIKNKFVMHIVSE
                     VYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEITSELEDCDRGIYGGAVGFLNFNE
                     DITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYAEICAKRKALLVAFENLKKENQ
                     "
BASE COUNT         3503 a         1736 c         1240 g         3508 t
ORIGIN      
        1 cgcttttata tatcttttag gttcaatccc ttttgggcta atcctagcta aattttttgc
       61 taaaactgat atcaaaaaag aaggttcaaa aagtatagga gcaaccaatg ttttaagagt
      121 agtaaaagaa aaaaatccca aactagcaaa aaaacttgcc attgctacaa taattttaga
      181 ttttgcaaaa gcagctattc ctttactaat cttgaaattt cttcattatg atcaagcttt
      241 gctttggagc gtcgcagttt tggctatttt tggacactgt ttttcaattt acttgttatt
      301 tgaaggaggg aaaggcatag caacaggagc aggcgctatg atagttttac ttccattgga
      361 agtgcttaca gcatttattg tgtgggtagt tattggaaaa atttttaaaa tatcttcgct
      421 agcttcttta gcagcgttac ttgcttttgt tataagttct tttatattta attatgactt
      481 agaaattcat acacatgcac ccgttttcat tatcgctttt attatagtat ataaacatct
      541 acctaatatt aaaagattga tttttaaaga agaatgcaaa gtcatataaa aataaaattt
      601 cactttaagt gtatcattgg tatattagat ttcgaaagaa gaaaaaaaca aaaaattatt
      661 atcaagctta aagctaaagc aaatgaattt ttaaattatg cagaggtaat taccaaaatt
      721 aaaacatggt ataaaaaaga agaattttac acccttgaag agtctttaga ctttgtaagc
      781 ttaaatttaa aaaaagattt tcctaattta accaatctta acataaaaat tttcaaaccc
      841 catataataa aaaatgctac agttggggtt aaattgaaaa aaaaatatta attttttttt
      901 aaagatatct aaacatttac ttaagctatg atataattct ttaaattttt cttaataagg
      961 atagaacaaa tgagaatttt agttatagaa gatgagatta gcctaaataa aacaattata
     1021 gacaatctta atgaatttgg ttatcaaact gattcttctg aaaattttaa agatggagaa
     1081 tactttatcg gcattagaca ttatgattta gttttagcaa actggacttt acctgatgga
     1141 gatggagcgg aacttgttaa cactattaag cataaatctc caagaacttc ggttatgatt
     1201 atgtcttcaa aaacagacaa agaaacagaa atcaaagctt tgaaagctgg agctgatgat
     1261 tttgttaaaa aacctttaga ttttgatatt ctactcgcaa gaattgaagc aagactaaga
     1321 cttggcggaa ccaatgttat taaaattgaa gacttagtta ttgatccaga tgaggaaaaa
     1381 attacttata aaggtcaaga tatagaactt aaaggaaaac cttttgaagt tttaacgcac
     1441 ttagcaagac attcggatca aattgtatcc aaagaacaac ttttagatgc catctgggaa
     1501 gaacctgagc tagtaactcc aaatgttatc gaagtagcta tcaatcaaat tcgtcaaaaa
     1561 atggataaac cattaaatat atctaccata gaaacagttc gtcgtagagg ataccgtttc
     1621 tgcttcccta aaaaatctta acaattttgc accttcggtg caaaaaattt atctttattt
     1681 ctatttttat attttattta agtttggtta ttgtataaac taaaattatt ttttaaattt
     1741 ttgaaaggtt atgatgtctc ttttaattac aaaagactgc gtatgttgtg atgcttgcag
     1801 agaagaatgt cctgatgaag ctatttatga aaatagtcca atttatgtaa tagaccctga
     1861 tctttgttca gagtgcgtta atgatttttc agagcctgcc tgtattgttg cttgcccata
     1921 tgaatgtatc attcctgatc ctgataatgt agaaactata gaagaattaa aactcaaaca
     1981 tagagataga gaattttaat ggcaaaaaaa acagccgttg ttgatcttgg ctcaaactcc
     2041 attagaatgg tgatttttga aaaaacttct agatatggtt tttatacaac ttgcgaatac
     2101 aaacgcaaag taagacttgg agaaaatgct tataataatg gcaaaattct ccaagaagaa
     2161 gccatgcaaa gagccgaaga tgccttagct tttttcaaac aatgcgcttt aaagcataag
     2221 tgcaaaaaaa tatttatagt aggcacatca gccttaagag atgccccaaa ttcaaaaaat
     2281 ttcattaaaa gaatcaaaga taatctgtct ttaaatatac gctgtataga tggaaaaagc
     2341 gaaagttact taggtggtct tgcagctcta aatttattaa gtccttttaa agatggaacc
     2401 actttagaca taggtggtgg ttctagtgaa ttgtgtttaa taaaaaataa tagaattatt
     2461 tcttgcatat ctcttgatat tggcactgtt aggctaaaag aattgttcta tgatactgga
     2521 aaaatggatt ctttagaaga atttataaaa ccaattttag aacaaattcc taaagaattt
     2581 tgcaatcaaa accttattgc aataggtgga agcttaagag caatatctaa ttccatcatg
     2641 caaaaaaatt cctatccact gaaaaattta catgattttc gctatatgct agatgaagaa
     2701 aaaggacata ttttaaaaat ttttaattca aacttagact ctttaatcaa ttttggcata
     2761 aaaaaggatc gttttgatac cattaaagag ggtatattta tttttttaaa gattgcggaa
     2821 aaaataaaag ccaaacaagt tatcacgagt ggggttggaa tcagagaagg agtttatttg
     2881 caagatttgc ttcgtcctaa aatcactttt ccaccaaatt ttaatcctag cttaaaatgt
     2941 ttacaagata aatttttaca atcaaaacaa aaaaataaaa ctccacattt tgctctgcaa
     3001 atttttacaa cccttaaaaa tcttcataaa cttaacgata gctataagca tactttacta
     3061 aatgctgcca aattatgcca tattggagaa tatttaaatt tctattttgc taatgaacac
     3121 tctgctcatt ttgtactagg tggattaaat tatggatttt cacataaaga aaaagcttta
     3181 attgctagca ttattaagct taatggaaaa aaagttaacc cttataatct tgaaccctat
     3241 aagcaacttt tacccaatat tcataccatt tcatggctta attttatttt gtgcctagct
     3301 aaaactttaa gcacaaatga agataagatt gattttgctt ttgcaaacaa tactctttat
     3361 atatatcaag aaaacaaaat tcttaattta cccaaagatg agctcaaaaa aattgcaaaa
     3421 ccagctacca tagcattagc aatcaatcaa aaaatttaag attttttacc tttttgacgc
     3481 tgctctataa gattttgaat tcttttttta ttctcttcaa aaaaagaatc aaaatttttc
     3541 tctgtttttt ctgtatgttt tattgtttgt tcctctggaa tttcaacact ttctaaaagc
     3601 acattggaat tacctattat cattgtataa cgtttattag cgtgatcaaa aataacaagt
     3661 tgattatttt tatctaaaaa tctttggaaa atcatagtaa aatctctaga aacattgtta
     3721 tttttataaa ccatagtctt tttaaaccac caaagcacta ttaacaaaat aactaaaatt
     3781 agcattacta agatataatt tgtataatca tacccttcta aacttgtact ttttggttta
     3841 ggcattaatt cttgagaatt attcacagta gttgtaggta cagattcgat atttgctttt
     3901 ccttgctcta tagctcgtat ccttactcca aatttatcat tgatagagct aagttctaaa
     3961 ttaatatttt gtttgttttg tagcataata taggtattat tatttttaga actaatacta
     4021 attttatcta caagttgaga gttaagttct tttaattcat ctttagaata cgttaaatca
     4081 ctaaaagtta aaagagttaa atttttttct tttttttgag aaatcttgcc attataggca
     4141 ttatcaaaag aaagcattaa atctactcga tcatttctat cgtagatatt aaaactaatc
     4201 agctcaacac tatataaagg taaaattaaa aaaaataata ctagcaatct catttaaatt
     4261 tcttttttaa agtattgaag cacagtctta gaatccaaaa tttcattaat tcttatagcg
     4321 agattttttt cataaaccat aacctcgcct ttgccaaaaa ttcttttatt gatataaagc
     4381 tcaacgcttt ctccagcagg cttttcaaga tcaataaccg aacctacttc aagttttaaa
     4441 agctccgcta cactcatatt tgtagttcca agctcgctta caaaatctac tgtaatatct
     4501 aagatatctt cataagattg taaaagccca tgatgaatgt taaactctat atcatcgctc
     4561 attatttgca atatcctatt ctaaaataac aattttcaaa tttataagtt aaagcttcat
     4621 ctaaaactat ttcagaaaaa tcaacttttc ctaaatattc cggaattccg agtttatact
     4681 cgtcatcacc cttggcatca tttaacaaat ttttagcata acctataatc tgattggcac
     4741 attctttagt taaatcgcac cagtcatctt ctttaaattt ttcatcatta attaaaattt
     4801 ctgcaatttt ttttaaaaat tcttttggaa aaaataaata aaaattacat tctccttcgc
     4861 ttttgcccat gataggaata ctcgctccat aaagttcacc gcttatatct tgagctgctt
     4921 caatgcgaag tcttaagata tgctcgcaaa aatgagtgat ggaatactca agaatcttta
     4981 acataactac cacctttata aaaaacttaa tttaaaatta tagtaaatat aaaataaaaa
     5041 tatgttttaa aattttattt tttgaaaatt tcttcaatat ctttcattat tatatccaaa
     5101 tttccttgtt taaaacactt tactatgcta gttcccacaa tcactccgtc agcaactttt
     5161 ctcattcttt ttacatcttg attattttga atgccaaagc ctacaaaaat aggcaaattt
     5221 gtaaaagatc tgatttcttt tactttatct tgtaagattg cttcttcgac acttttcgta
     5281 cctgtaatac ctatgcttgc taataaataa ataaaacctt tagcatgttt tactaacttt
     5341 ttaacccttt ctttaggggt tgtaacactt acaagtgtaa ttaaagctat attatatctt
     5401 tcacactctt taattaaatc atcactttct tcaaaactca attcaggcac aatcaaagca
     5461 caaatcccta aagattttgc ttttttcaca aatttttcca agccataaga aaaaattaaa
     5521 ttataataaa ccataaaaac caaagctttt ttaattttta tcctagctaa aagcttaaaa
     5581 acactatgaa tatccatgcc ttgatcaaga gctatttttg ccgcatctgc aataatctca
     5641 ccatcggcaa taggatcact ataagcaaca ccaagttcta aaatatcaat agggctttga
     5701 tccaatcttt gcaaaaaagt ttcacttgtt tgaagatttg gataacctaa aaccgtataa
     5761 gccacatttg cattttcttt ataaaatttt ctaaaatcaa ccataaatca cccctttttt
     5821 ataatctcta atcatttgca tatctttatc tcccctgcct gaaagattta ctactatcac
     5881 gcttttcttt tttaaagttg gacaaagttt ttctaaaaat gccaaagcat gcgaactttc
     5941 aatcgctgca ataatacctt cttctttaca aagtaatttt aaagcctgca tacattcttc
     6001 atcacttata gcatgatatt gcgctctttt gctttcaaat aaaaaagcat gcaaaggacc
     6061 aattcctgga taatcaagcc ctgcagaaac actatgtaca ggcaagatat tgcctaaatc
     6121 atcttgtaaa accttggttt tcataccgtg aataatgcct gtttttccct tatttaaagt
     6181 cgctgcatga taaggcgtat caatgccaag cccccctgct tcaataccta taagtttaac
     6241 attttcatct ttgataaaat cataaaaaat cccagctgca ttgcttccac ctccaacagc
     6301 tgcgataata taatctactt ttttattgag tttttgaagt tgcattttgc attcttttcc
     6361 tataatactt tgaaaatgca ttaccatttt aggataagga taaggaccta ccgcacttcc
     6421 aaccacataa aaaatatttt taatatctcc aacccaagct tgaatagccg cagtagtagc
     6481 ttcttttaga gttttaagcc cactttgtac tgcatgaatt ttagcaccca aaagctccat
     6541 tttataaaca tttaaagcct gtctttgcac atcggttgcc cccatataaa tttcacattc
     6601 aagtcctaaa agtgctgctg cagtggctgt tgcaagcccg tgttgacctg ctcctgtttc
     6661 tgctatgatt tttttctttc ccattttttt tgctaaaagg gcttgagcga tggcattatt
     6721 gattttatgt gctccggtat gatttaaatc ctcgcgtttt aaataaattt catgctgata
     6781 ttttttgctt aaatttctag caaaataaag tggagtagga cgccctacat aagtttttaa
     6841 aagctcgttt aattcttttt taaagagttt atctttagaa aatttcaaaa aagcaccttc
     6901 tagctcattt aaagcaaaca ttgcactttc aggcaaaaac tgcccaccaa aatccccata
     6961 atacgctttt ttcatttttt caactccttt aaaatttgtt ttattttgtt gatatctttt
     7021 aagccttttt catcttcaag ttttgaatta agatctaaaa ttttagctcc cgtttgtaca
     7081 gccttatgaa tattatccaa acctatgcct ccagctaatg caaaatcttt agtataagaa
     7141 cctaataaag tccaatcaaa acttattcca ttaccgccct ttaaaattcc cttagcatca
     7201 aaaagtacta aattagcaaa aatttcactt tttaaatcta aactattttc cacactaatc
     7261 acctgccaaa caaaaacatt ttgcaccttt aaaatttcaa attcttcttt ggtaatagtg
     7321 cgataaattt gtatcccatc aagcttagct tctttaatac atcttaaaat ttgttccaaa
     7381 ttttcatcta caaaaacacc gacaactttt ttatcttttt catgaaaaat tgcacttaaa
     7441 tttcttgctt gttctaaact cactcttctt ggacttttag caaaaataag tccaaaaaaa
     7501 tcaatattta aaaaagctaa atctttggca tttttttcat ctttaatacc acaaatttta
     7561 agctttagca taagcttgat actccttaaa atattctata accttacctg aataaatggc
     7621 ttctaaaatc atatctttag ccactaaagg cgaacttgct ttattggctg tataaagtgc
     7681 aaacatagca tttaaaacta ccaaatcaaa ttttgcccct tgcattctac cgcttaaaat
     7741 atcttttaaa tctttagcgt tgtcatatgc actagatcct atgatttcac tatgaaaagc
     7801 tcttttaaaa ccaaattgtt caggacagat agaatactct aaaatttctc cttcacaaag
     7861 ctcataaatt ttactttcat cgcaaatact aagctcatcc ataccatcat ttcctcttac
     7921 cactaaagct tttttgcgtc ctaaattttt taaaacctct atcaaaagcc tatgcacagg
     7981 tgcgtgataa tttcccataa gttgatattt taactttaaa ttagggtgca ataaaggacc
     8041 taaaacatta aaaaccgttc ttactccaag tcttgatctg acctctttaa gttctcctac
     8101 caaaggatga aaaaatggag catgtaaaaa actaagccct tgattattta gttgttttaa
     8161 aactgattct aaagtgtttg gagtagttat atttaaagct tctaacacat ctgtacttcc
     8221 gctagaactt gaaatggcac gatttccgtg tttggctact tttactccta aagctgctaa
     8281 aataaaagca ctagtcgtag aaacattgat acttttaaaa ccatctccac ctgttccaca
     8341 aatatcaatc atctcactct catcactaaa agtttgagaa tatcttaaaa tttgtcttac
     8401 aaaagcactt aaagattttt cgtttaaaga cttttcagtg attaaaatca acaaagccgc
     8461 taattgtaaa atttcataat ctttagacat aataatctta caaatttgct caaaatcatc
     8521 gctttgtaaa aaatgatttt cactcatttt ttgcaaataa aaacttaaag gattttcttg
     8581 tttttgtggt ttttttatat cttgttttaa aaaattagaa aaaagttgta agccatattc
     8641 actaaaatag ctttcaggat gaaattgcac accataataa ggtaaatttt tatgtcccaa
     8701 agccataatc acaccctttt catcaagggc taaaatttca agctcatcac taagctgttt
     8761 aacctctaaa gaatgataac gcattacact aaaatttgaa ggcaaattag aaaataattc
     8821 attttccctg cactgtttta tcaaagaatt ttttgcatgc ataggctctt gcatcttaac
     8881 cactaaagaa tcaaaagcta aagctaaagc ttgatgccct aagcaaatgc ccaaaacagg
     8941 gatattaagc cttgctttaa aaatttcaag acaaatccca ctttgacttg gatgctttgg
     9001 accaggactt aaaataatat gagtaggatt taaattttta atttcactca gagaaattgc
     9061 atcatttctt cttactaaaa tttcatcatt gctgagttgc tctaacatgc ttttaacatt
     9121 aaaaacaaaa gaatcataat tatcaattaa aagtatcatt gattttcctt ttttaaattt
     9181 tcaaaagcta ccaaaagcgc cttgcgttta gcacaaattt ctgcatattc tttttgactc
     9241 tcactttgca aaacaatacc cgccccactt gccaaataag ccttatcttg agtaaaaaaa
     9301 gcgcaacgga ttaaaatcgc taaagttatg tcttcgttaa aatttaaaaa tcctaccgca
     9361 ccaccataaa ttccacgatc gcaatcttca agctcgctag tgatctctaa agctcttatt
     9421 ttaggagctc cgcttaaagt tcccgctgga aaaactgctt caatcacatc aaaaatactc
     9481 gcatcttctt tcatattggc atacacttca ctcactatgt gcattacaaa tttattttta
     9541 ataatagaaa aaagattttc cactcttgtt tgagtgccaa atttagaagc atcatttctt
     9601 gctaaatcta caagcatctt atgttcacta agttcttttt catcacttaa aagatctttt
     9661 tctaaagcta aaagatcaca gttattttcc aaatttctag ttccagcaat aggggctaaa
     9721 taaatctctc tttttttaat tttcaataaa aactctggag aagaacccaa aacaacacca
     9781 tatttacttg gaaaataaaa catataagcg cttggattta aagcacttaa actctcataa
     9841 taatcaaaag catttacttg atgtttgata caaagttgct tacttaagac cacttgaaaa
     9901 atatctccac ttaaaagata ttctttggct ttttcgcaca tttttaaaaa atcatttttt
     9961 tcatcttcta aagaatttaa aatttca
//
LOCUS       DARATF010000060         9814 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.060, whole genome shotgun sequence.
ACCESSION   DARATF010000060 DARATF010000000
VERSION     DARATF010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9814
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.060"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            112..1518
                     /gene="aspA"
                     /locus_tag="SB502_001222"
     CDS             112..1518
                     /gene="aspA"
                     /locus_tag="SB502_001222"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEG0434663.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVVAYSLFNSVVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            1535..2872
                     /locus_tag="SB502_001223"
     CDS             1535..2872
                     /locus_tag="SB502_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEG0434664.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFVACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVVIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLI"
     gene            2980..4341
                     /locus_tag="SB502_001224"
     CDS             2980..4341
                     /locus_tag="SB502_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3014 family protein"
                     /protein_id="HEG0434665.1"
                     /translation="MKIKVGLIFSGIACLFLTACVNQVKQNTTFENTLTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAVEESYKYDVDLENVSPKAA
                     KFIGTTLLNDNIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRALMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKAADLFREVSIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVIVRSFAPYLPASVAI
                     MEK"
     gene            4351..4719
                     /locus_tag="SB502_001225"
     CDS             4351..4719
                     /locus_tag="SB502_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HEG0434666.1"
                     /translation="MKKNILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLVSDTRAKEFRLEIKAKN"
     gene            4743..5366
                     /gene="lpoB"
                     /locus_tag="SB502_001226"
     CDS             4743..5366
                     /gene="lpoB"
                     /locus_tag="SB502_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HEG0434667.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQIKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
     gene            5449..6786
                     /locus_tag="SB502_001227"
     CDS             5449..6786
                     /locus_tag="SB502_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434668.1"
                     /translation="MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKD
                     ITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAM
                     LNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL
                     DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDV
                     GVIAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGA
                     PIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLKDERTTGD
                     TYEEIIKQSINVNDSSTQEQTQNVTNIIDKVNSKIKASASGKIRGIRTLKKWSYTSEN
                     GIEHVGAVRFYSYENLTNTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF"
     gene            6796..7998
                     /locus_tag="SB502_001228"
     CDS             6796..7998
                     /locus_tag="SB502_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434669.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDTNGKYTVNVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDFSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANEAALK
                     QIANRIAGDILNAIYPLKVASVENNEVVFSQSLNQGDVYECFALGKVIKDTYTKENTG
                     RVESKTGSIEITRTSPKLSYAKITEGSVKVGDICRPLIGSNSGNGYTIGRDANYQTQE
                     GGGVNLGF"
     gene            8157..8465
                     /gene="rplU"
                     /locus_tag="SB502_001229"
     CDS             8157..8465
                     /gene="rplU"
                     /locus_tag="SB502_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEG0434670.1"
                     /translation="MYAIIKHSGKQYKVSVGNELKLDHFEAESKANIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            8476..8730
                     /gene="rpmA"
                     /locus_tag="SB502_001230"
     CDS             8476..8730
                     /gene="rpmA"
                     /locus_tag="SB502_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEG0434671.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            8837..>9814
                     /gene="obgE"
                     /locus_tag="SB502_001231"
     CDS             8837..>9814
                     /gene="obgE"
                     /locus_tag="SB502_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEG0434672.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDVQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVNLGEEFAEQITLNINELENYLKEINNPQSFLIKVSSLEKTG"
BASE COUNT         3565 a         1322 c         1850 g         3077 t
ORIGIN      
        1 aagtagtttt cttattaacc aattattaac taaaaatgca atatcattat tttatgattt
       61 aaatcaaaaa tttttgattt taaattaaaa tacttttatg aaaggttcaa aatgggaaca
      121 agaaaagaac atgattttat tggggaatta gaaatctctg atgaggttta ttatggagtg
      181 caaactttta gagctgttga aaattttgat atttctcatg atagattaaa agattttcct
      241 cgctttgtta gagctttggc tagagtaaaa aaagctgcag ctatggcaaa tcatgaatta
      301 ggtcttttgg ataaaaatat ccaagatgcg attattaaag cgtgcgataa aattttagaa
      361 ggcgggtatt atgatcaatt tgtagtagat atgatccaag gaggtgctgg aacaagtaca
      421 aatatgaatg ctaatgaagt tatagcgaac ataggacttg aacttatggg tcataaaaaa
      481 ggtgaatacc aatatcttca tccaaatgat catgttaatt taagccaaag tactaatgat
      541 gcttatccta cggctttaca ccttgccttg catgattatt taagtgattt ggcaaaagct
      601 atggaacatc taaaaaaagc ttatgagaga aaagctgaag aatttaaaga tgttcttaaa
      661 atgggtagaa cccaactgca agatgctgta cctatgactt taggtcgtga atttaaaact
      721 tttgccgtaa tgataggtga agatatacaa agagtattag aagctagaaa attgatttta
      781 gagatcaatt tgggtggaac tgctattgga acgggaatta attctcatcc tgattatccg
      841 aaggttgtag aaagaaaaat aagagaagtg acaggttttg aatatactgt ggctgaggat
      901 ttgatcgagg cgactcaaga tacgggagct tatgtacaaa tttcaggtgt tttaaaacgt
      961 gttgcaacaa aactttctaa agtatgtaat gacttaagac ttttaagtag tggtccaaaa
     1021 tgtggtctta atgagattaa tcttccaaaa atgcaaccag gtagttctat catgccaggt
     1081 aaggtaaatc ctgttattcc tgaagtagtt aatcaagttt gttattttgt tattggagca
     1141 gacgtaactg taacttttgc ttgtgagggt ggacaattgc aacttaatgt ttttgaacca
     1201 gttgtagcat atagcttatt taattctgtt gtaatgctag aaaaagcaat gtatacttta
     1261 gctgataaat gtatagatgg tattaccgca aatgaaaaaa tttgttcaga ctttgtctat
     1321 aattcagtag gtatagtaac agctttaaat ccttatattg gttatgaaaa ttcagcttct
     1381 atagctaaag aggcaatgaa cactggaaaa agagtggctg atattgcgct tgaaagaggg
     1441 cttttaagta aagaacaaat tgatgaaatt ttaactccat caaatatgct aaatcctcac
     1501 atggaagcta aaaaatagca ttttaggatt taatatggat ataatgataa ttttgcaagt
     1561 aatcgtcctt cttggggcga tttttatcgg tattcgccta ggcggcattg ctataggtta
     1621 tgctggagga ttaggtgtag ttatactagg acttgtttta ggtatgaaac ctggtaatat
     1681 tccttgggat gttattttaa ttattgctgc agctattgca gcaatttctg ctatgcaaca
     1741 agcaggtgga cttgattata tggtaagggt gacagaaaaa attttaagat caagccctaa
     1801 atttataaat tatttagctc cagcttgtgg atggttgctt acaatcttag caggaacagg
     1861 aaatgcagta ttttctttaa tgcctgttgt agttgatgtt gcaaaatctc aaaacataaa
     1921 acctagtgtt ccactttcat taatggttgt ttcttcgcaa attggaatca ctgcttctcc
     1981 tgtaagtgca gctgtggttt atatgagcgg agttttagag ccacttggat ggaattatcc
     2041 aactttaatt ggaatttgga ttagcacaac ttttgtagct tgtatgctta cagcttttat
     2101 agtgagttta atcactccta tggatttaag caaagatagc gtttatcaag aacgcttaaa
     2161 agcaggactt gttaaagatg caggagctat tttacatggt gaagataaac caggtgctaa
     2221 actttcagtg gtaattttct tgatcactgt tttggcagtt gtactttatg caaccgcaat
     2281 ttcaagcaat attaaatgga ttgatcctgt tgtggttcca agagatgcag ctattatgag
     2341 ctttttactt actgcagcaa ctttgatcac ttggctttgt aaagttgaac caggtaaaat
     2401 tcttgatacc agtgtattta aaagtggtat gactgcttgt gtttgcgttt ttggtgtagc
     2461 atggcttgga aatacttttg ttgcaggaca cgaagcttct attaaagaag tagcaggcga
     2521 ctgggttaaa caaacccctg ctatgttagc agttgcattt ttctttgcaa gcatgctttt
     2581 atattctcaa gcagcaaccg caaaggccat tgtacctgta attatcaccg ctttaggaat
     2641 ttcagcagca aatccgcatg attcttatat gcttgtagct tgttttgcag cagtttcggc
     2701 actttttgtg cttccaactt atccaacctt acttggtgct gtgcaaatgg atgatacagg
     2761 aacgactaga attggtaaat ttatatttaa tcactcattc tttataccag gggttttagc
     2821 tattgcaatt gctgtagcat taggctttgt attagctcct atgcttattt aaatcaaacc
     2881 ctaggttttt ctctcctagg gttaaaattt tttcattagt ttttaagtat atactacgct
     2941 ataatattca tttttaattt tctttaagaa aggaatttaa tgaagataaa agttgggttg
     3001 attttttcag gtattgcttg ccttttttta acagcttgtg ttaatcaggt taaacaaaat
     3061 acaacatttg aaaatacttt aacacaaaaa tattgtggtg atgatttttt caatcaaaat
     3121 ttagaaaaaa ttaaaaaaaa tgatgatgtc atttatacag gattaaatgc aggtttgatt
     3181 gctagaaatt gtggtgattt taataaaagt aatgtatttt ttgatgctgt agaagaatct
     3241 tataaatatg atgtggattt agaaaatgta agccctaaag cagctaaatt tattggtaca
     3301 accttgctta atgataatat agtagattat gatggttctt tatatgaaag aattatggtt
     3361 aatatatata aagctctaaa ctatatggaa gaagatgatt atgaaaatgc aagagttgag
     3421 tttaatcgtg ctttaatgcg tcaagataag gcaaaagaat attttgctaa agaaattgaa
     3481 aaaaatcgtg ctgatttaga taaggcaaaa gaagataaaa attatgataa aaatatgaat
     3541 gaaaattcaa aagttataga agcgcaatat gataacttat ttaaagaatt tgatacaaca
     3601 aaaaatttca taaatcctta tgcgacttat cttgcttcaa tatttttctt tatggataaa
     3661 gattatagaa aagctgcaga tttatttaga gaagtatcta ttatttatcc aaaaaacaaa
     3721 actatcaaaa aagaggctaa aatttttaaa gaatatgcca caaaaataaa agttaaaaaa
     3781 gctaaaaaat atgtttttgt agtttatgaa aatggatttg gtgtagttaa ggatgaattt
     3841 gctttaacct taccttttat agtggataaa aaaattatta gcacaaatat tgctttacaa
     3901 accttaaaaa aaagggaagc ttcttttgca aatttaaata taaatggtca aaatacaaat
     3961 gattttgtag atttagacaa tattgtcgct actgaattta aaataaatat gcctgcaatg
     4021 attgctaaag ccttagctca aactataatt aaaaccactt taaatgtagc tgttgcaaat
     4081 aatgactcta caggtggatg gctaagtctt gcaacagcag tagcaactgc tgcaaccaat
     4141 aaagctgatg tgcgttcttg gagaggttta ccaaaaagta ttgccatagc aacaatagaa
     4201 aacgacggaa atttagaaat caaagatcca caaggcaata ttttgtttca aaaatcattg
     4261 gataaaaata aaaatgctct tgtgatagtg cgttcttttg ctccgtattt acccgcaagt
     4321 gttgctatca tggaaaaata aggctaaaag atgaaaaaaa atattttatt tattttaatg
     4381 tttttactta gtgcttgtgc accaagttat caaataaatt caaatcaaaa tactgtaatt
     4441 ttaggttcaa atttaccaaa aagtttagta aaacaatttc aaaagcgtat aaatagcaat
     4501 ggttatttag aatttgaagt gattttgcgc agtacttttg ctaaagatgt aatttataaa
     4561 gtagattggt tagataaaga tggttttgtg ctaagagatg ttttaaatga ggactatcaa
     4621 gcccttagaa ttccagcagg acaagaggta attcttcgta aacttgtatc tgatacaaga
     4681 gcgaaggagt ttagattaga aattaaagca aaaaattaat ctcattttag gaaggataaa
     4741 tcatgaaaaa aacaaaaatt ttaggaacag ctcttattgg agctttgctt tttagtggtt
     4801 gtgcgcaaac agcttataca gatggaaagg caagtcagat aaaaaaaggc gatgctttaa
     4861 ccttgggtct tgatagacaa gattttgaaa gtgcagctga aactatgata aatagtatgt
     4921 taagcgatcc tgcttttgca aatattaaac caggtacaag aaaggttatt gctattggta
     4981 gggttgtgaa tgataccccg caaagaatcg atactgaaaa actcaccgca aaaatcactt
     5041 ctgcattaag aaaatcaggt aaatttgttc taacttcagc agttgctgca ggcggagcac
     5101 ttgatagcat gagtgaagat gtaagagaat taagagataa tgatgagttt aatcaaaaaa
     5161 ccatagcaaa aaaagggaca ttggtatcgc ctgatttttc tcttgcgggt aaaattagac
     5221 aagataatgt aaaacttagc aatggtaaaa ctcaagtaga atactttttc ttgttaagac
     5281 ttactgattt aacatcaggt ttagtttatt gggaagatga acaaactatt gataaaaccg
     5341 gttctagtaa atcagttact tggtaaaata aaaattaatt tatgaataaa attttttagc
     5401 tcaagtgttt agcttgggct ttttttatga tttttaaaag gatacgaaat gaaaaaaata
     5461 ttatttatcg gctctttagt tatggcaagt ttactttatg cacaaggttc ccagcctgta
     5521 gaaattacac aacaagatat aaatactcaa aatgaaatgt ctgacgcaag tactaaggat
     5581 attaccccaa aatcaattga agattttttt gaagaatttg cggataattt cggtatagaa
     5641 tatggtataa ccaaagatgg aaaaactttt tatacaggaa aaagtactgt tgctgtaaat
     5701 gatactgatc cacaatttgc acaagcttta caaaatgctt accaaaaagc aatgttaaat
     5761 ttgcaaagcg aatttataag agatgctttt ggaagaattg ctacaagcaa gattcaaaat
     5821 tatgaagcag acaattctac taatgctaag gaatttgatg aattgccaaa aggtgataag
     5881 gttgatcaaa ttttaaataa acttacacaa ttagctggtg ctcagcttga taaggcatta
     5941 aaagatttag gtatagatac aaattcttta agcgaagaca gaaaaaagac tttattaaag
     6001 caagaatttc ttaataaaac tatgacaaat gccataggtt ctatgagtgg acttgttcct
     6061 gtgcaaacta tagttacaca aagaagaggt gagtatgatg taggtgttat tgctgttatt
     6121 tccaataaaa ctcgccaatt agcaaaagat atggcactag caagacagag tgctattaag
     6181 ggtaaaggca aggcaataag tgagtatctg ccaaaagata caaaaggctt tttaaatgaa
     6241 tatggaattc gcttagttta tgatgaaaat ggtgcaccta ttattttaag ttatggaaac
     6301 tggggttatg tagcagatcc tagtaatgct aaaaaaacaa atattttaga agatagagcc
     6361 aaagaaacag cacttactat ggctgatgct gctattatag agtttattaa tacaaattta
     6421 agtcttaaag atgaaagaac aactggtgat acttacgagg aaatcatcaa acaaagtatt
     6481 aatgttaatg atagttccac tcaagaacaa actcaaaacg taacaaatat tattgataaa
     6541 gtaaatagta aaataaaagc aagcgcaagc ggtaaaattc gtggtattcg tactcttaaa
     6601 aaatggagct atacaagtga aaatggtatt gaacatgtag gagctgtgag attttattct
     6661 tatgaaaatt taactaacac aaatgaggct ttaaattcaa agtcaaatgc aacaaaaaat
     6721 gaagctaaaa aatcttctag catacaaaga agttctaatg ttgtaaatag catggatgat
     6781 ttttaaaggt aaaagatgaa aataattaaa attctttttt taggcttatt tttaagccta
     6841 agtcttaatg ctaaagttat aaccacaact tcaacaaaat caagcacagg tgaaggcaca
     6901 ggcttgacca gggaagatgc gataaacaat gccattatag aggctatagg aaaaatgagc
     6961 ggagtaagca tcaattctct taagaaatct aacactagcg tttcaactga taattcaggt
     7021 tcaaacatac aagataatta cagcgagcaa atttcaaaag ccaccaaagg tagagccgat
     7081 acttatgaaa tcaatagtgt tgaacaagat acaaatggta aatatacagt caatgtaacg
     7141 atttttaaaa ccacaacaac aaaaaagtat caagctccag gtttaagtgc agataataga
     7201 agaagtatta ctgtttttga ttctactcca gatgctgcaa aaagaggcat aggctcagct
     7261 ttacaacaaa aaatcatttc tgatttattg caaagtcgta aatttaatgt tttagaccgt
     7321 gattttagtg gctattatga aatggaaaaa gctttaatca aaagtggtga cgcagctagt
     7381 gatgaagttt ataaacttaa aaatgtgtta gcaactgatt atattttatt gttttctatt
     7441 tcaggacttg aaggtaaaca aaaaacaagc aatttaacag gaaaaagcaa aactgaaatt
     7501 gaagttatcg tagattatcg tgtgctttta tttgctacaa gacaaattaa attttctaat
     7561 actttaagta tgaaagtcaa tcttaaagac aatagtctta gcgccaatga agctgcactc
     7621 aaacaaattg caaatcgtat tgcaggagat attttaaatg caatttatcc tttgaaagtt
     7681 gcaagcgttg aaaacaatga agtagtattt tctcaaagct taaatcaagg tgatgtttat
     7741 gaatgttttg ctcttgggaa ggttataaaa gatacttata caaaagaaaa tacaggaaga
     7801 gtagaaagca aaacaggaag tattgaaatc actcgcacaa gccctaaact ttcttatgca
     7861 aaaatcacag aaggtagtgt aaaagtaggc gatatttgta gacctttaat cggtagcaat
     7921 agtggaaatg gctacactat aggtcgtgat gcaaattatc aaacccaaga aggtggcgga
     7981 gtaaatctag gcttttaaat ttttagagtt tgatttttct caaactctaa atcctttctt
     8041 aaattcatca aaaattaaag aaaaattttg taaaatcgaa attttattaa accactaaag
     8101 cttttaaatc cgttattgcg gtgctttatg gtactaccaa tttataagga aaagcaatgt
     8161 atgctattat caaacacagc ggaaagcaat acaaagtaag tgttggcaat gagctaaaac
     8221 tagatcactt tgaagctgaa agcaaagcaa atattgaagt aagcgaagtt cttgctatca
     8281 atgataaaga attaaaggta ggtgcacctt tcgtagcagg tgcaaaagtt gttttggaag
     8341 tgatcaatca cggaaaagat aaaaaagttg tgatttacaa aaaaagacgc agaaaagatt
     8401 ctaaactcaa acgcggtttt agaagacaat ttactcgcgt tgtagtaaaa gatatcaaag
     8461 cttaaggagt aaagaatggc acacaagaaa ggtcaaggtt caactcaaaa taaccgcgat
     8521 tccataggtc gtcgtttagg tgttaaaaaa tttggtggcg agtttgttag agctggaaat
     8581 atcatcatcc gccaaagagg aactgcaact catgcaggta acaatgtagg catgggaaaa
     8641 gatcatacta tctttgctct aattgatggt tttgtaaaat tcgaaagaaa agacaaagat
     8701 agaaaaaaag tttctgtata tcctgcataa gtttttagga cgctttttag cgtcttgaaa
     8761 actttaaatt tataaattta acttctttta tttactcaaa tttagcttta taaatttaaa
     8821 gtcaaaggca atttaaatgt ttattgatag tgttaaaatt actttagctt caggcgatgg
     8881 tggcaaaggt gctgtaagtt ttcgccgtga aaaacatgtt ccacttggtg gccctgatgg
     8941 aggagatggt ggaaatggtg gtgatattat tttcgtatgt gataataata cccacactct
     9001 tgtaaatttc aaaggcaaaa gagaattacg cgcgcaaaat ggtgctggtg gaatgggacg
     9061 caataaaaat ggcaaaaagg gtgaaaattt agaacttata gtgcccgaag gaacgcaagt
     9121 tatcgatgta caaaccaatg aaattttact tgatcttacc aaagaaggac aaagagagct
     9181 ttttttaaaa ggtggaaaag gtggacttgg caacacccat tttaaacacg ccaccaatca
     9241 acgccccgat tacgcacaac ctggtataaa aggagaaagt cgcttggtca gactcgaact
     9301 taaacttatt gccgatgtag ggcttgtggg ctttccaaat gtgggaaaat ctactcttat
     9361 aagcgttgtt tcaaatgcaa aacctgaaat tgcaaattat gaatttacca cccttactcc
     9421 aaaacttgga ctcgtagatg tagatgagta taattccttt gttatggctg atattccagg
     9481 gattatcgaa ggagcaagtg ggggtaaagg cttaggactt gcctttttaa agcacataga
     9541 aagaacgagc tttttacttt tcgtgctaga tcctatgagg caaatgcctt taaaagaaca
     9601 atttatagta ctaagaaaag aacttgaaaa attttccaat gaactttttg ggcgtaaatt
     9661 tggcatcatg atttcaaaaa gtgatagtgt gaatttagga gaagaatttg ccgagcaaat
     9721 tactttaaac attaatgagt tagaaaatta tctcaaagaa ataaataacc cacaaagttt
     9781 tttaatcaaa gtttcaagcc ttgaaaaaac agga
//
LOCUS       DARATF010000061         9747 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.061, whole genome shotgun sequence.
ACCESSION   DARATF010000061 DARATF010000000
VERSION     DARATF010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9747
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.061"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(109..438)
                     /locus_tag="SB502_001232"
     CDS             complement(109..438)
                     /locus_tag="SB502_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEG0434673.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVGIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            complement(435..1709)
                     /gene="hemL"
                     /locus_tag="SB502_001233"
     CDS             complement(435..1709)
                     /gene="hemL"
                     /locus_tag="SB502_001233"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEG0434674.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQACHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMDDKIIDTTLEAVRESFKRI"
     gene            complement(1706..2053)
                     /locus_tag="SB502_001234"
     CDS             complement(1706..2053)
                     /locus_tag="SB502_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434675.1"
                     /translation="MKIVLMFFLFSISLFGADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            2133..2981
                     /gene="folD"
                     /locus_tag="SB502_001235"
     CDS             2133..2981
                     /gene="folD"
                     /locus_tag="SB502_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEG0434676.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPAS
                     QTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGAMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            2991..3839
                     /gene="lepB"
                     /locus_tag="SB502_001236"
     CDS             2991..3839
                     /gene="lepB"
                     /locus_tag="SB502_001236"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEG0434677.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRIVYANKTLYVRMHEGDKFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPAYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKNKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(3861..5021)
                     /locus_tag="SB502_001237"
     CDS             complement(3861..5021)
                     /locus_tag="SB502_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEG0434678.1"
                     /translation="MKNIFETLKDLENQISCLDESELISLEKAKDRILAKDLYARKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADT
                     ILMLEDEYIEENKLIIKKAPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMLQNASYLGIIKDDF
                     KSTKEALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GENFVLILPGNPMAAYLSCFIFAKKIINLLSGNLDNPLTFYGKMGMDLKLKSGRNNLI
                     LGNLEKGIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
     gene            complement(5018..6274)
                     /gene="murA"
                     /locus_tag="SB502_001238"
     CDS             complement(5018..6274)
                     /gene="murA"
                     /locus_tag="SB502_001238"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEG0434679.1"
                     /translation="MTYLEIEGTNHLSGNVTISGAKNAALPLIVSSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAKGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGSD
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNATHLSAVLAKLHQMGFETLI
                     TEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKDLGAKITRLEE"
     gene            complement(6340..6768)
                     /locus_tag="SB502_001239"
     CDS             complement(6340..6768)
                     /locus_tag="SB502_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434680.1"
                     /translation="MQINNSLNSLSQYVKVNSNEENQNSKNQEQNALAQDPAVEVNIS
                     KEAKEKSNTSNQNNSQAPAQALNAQNNTQQDSSSNSEDKLTELTQKLAEIQAKIVELT
                     AKMSKANEDQIKSIESQIATLNAQASTIQAQIQELQSQQA"
     gene            6863..7735
                     /locus_tag="SB502_001240"
     CDS             6863..7735
                     /locus_tag="SB502_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0434681.1"
                     /translation="MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLI
                     LIFLSFKAQKILVFTNLKESLSICMFGFFGLLLTQFGYFKAIYYTDAGTATMIQYCAP
                     LIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFG
                     VAFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGI
                     VFIGTIGAFCLYLKGVEYIGALRASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLI
                     ILSVILNAKKTKVS"
     gene            complement(7722..8288)
                     /locus_tag="SB502_001241"
     CDS             complement(7722..8288)
                     /locus_tag="SB502_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEG0434682.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEIFGGRVSKMQNP
                     MHGKISKLYFKKDPIFKGIKKEIEICLYHSLHISSMSEKCKILAHNSENIIMAIKHKK
                     YPIYGLQFHPEAVLTQKGKKILKNFMKL"
     gene            complement(8285..>9747)
                     /locus_tag="SB502_001242"
     CDS             complement(8285..>9747)
                     /locus_tag="SB502_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HEG0434683.1"
                     /translation="KVKEAISKGRVYQINLTQNFKFHSKMDSFELFKLLLSRQDTEFK
                     AFIKDETREILSFSPELFFKTKKRKIFTKPMKGTIKRDKDPIKDEENKIFLQNDTKNL
                     SENVMICDLLRNDLSKIITKKSLKTKLFEIQSHPTLHQMTSSVQGKLKKNISLYQIFK
                     ALFPCGSITGAPKLESIKFIEELEQRDRGIYCGTIGLIHKNKNKFSVAIRTLEKQDEI
                     YTYSTGSGLVWDSKFKDEFEELKLKSAILNPCDFHLFETMYFKNSQILFLKEHLLRLI
                     NSALKFNFNTHKLFKDFYNVLNQKSSYKEYQNFTLFKLDEKIFHKKHSLFYNFPLPFK
                     NPHKEGILKLILYKDGRYEFQQSALKQNSNDILLLSDDKINSKSDNLYHKSSLRTFYN
                     QHSYKWQQNLCYDIAFFNEKDELCEGSRTNLILEKNSQFYTPQIQSGMLNGVYRNFLI
                     NLGLIKEKALFKQDLFEAENIYCINSVRGLKKVKLQ"
BASE COUNT         3068 a         1426 c         1553 g         3700 t
ORIGIN      
        1 catagcttaa aaatatatct aatttaaaat gatttaacaa tgaaaatatg atccaaaaaa
       61 ataaatgaat aatggcaaaa atacaaaata gagctttttt atgttccatt atttgttctt
      121 ttctttttga attttttctt tgatcaactc atctctttct ttaaattctt catagctttt
      181 tacttgaact ttataagctt tgtaaacatt aagtatagca gcactgatcc cccaaaaaac
      241 tccaagccaa aaaagccaag gataaggagt aaatttttta agtaaatatc ctattcccac
      301 acctataaat acagcaacaa ccatagagat gccaagactt aaaccatccg cagcttcaag
      361 agttttgcga atgatttttt gtcttttgct gttggaattt tctaagtgat ttttttcttc
      421 ttttaaaata ttgctcatat tcttttaaag ctttccctaa cagcctctaa tgttgtatct
      481 ataattttat catccatttt tgaacatata aagcctgttt caaattgaga aggtgctaaa
      541 taaattccat tttcaagcat atttttgtga aattttgaaa ataatgctag atcagatttt
      601 aatgcatctt ggtagtttga tacaggatct ttggtgaaaa agtatccaaa catagaacct
      661 acatgacaag cttgcagcgg aagtcctttt tcatctgcta attttttcat tccttgtgta
      721 agtttttttg ctaattttcc aagtttgtca taaagcttgg ttttcttttt ggcttttgta
      781 agacttgcta tacctgcagc cattgccaaa ggatttccac ttaaagttcc tgcttgataa
      841 actccaccca aaggacttaa aatatccata atttcagctc tagaagcaaa tgctgctgca
      901 ggtagaccgc ctcctattac cttaccaaaa gtaattatat ctgcttggat atgattgatt
      961 ccataggaac caaggtaaga tgctctatat ccactcatta cttcatcaaa aatcagcaga
     1021 gtttgattgt ttttacagat cttagcaagt tcttctaaaa aatcttgttt agctggaact
     1081 aaccccatat ttccagcaat aggctcaatg ataacacatg caatatcttt atttttttca
     1141 aaaagctctt taacgctatt tatatcatta tatttagcta ctaaagtgtg tttagctaca
     1201 tcttctaaaa cacccaaaga actaggagag ttaaaagtag cagcaccact tcctgcactc
     1261 actaataatg aatcagaatg cccgtgataa catccttcaa attttaaaat tttatctttt
     1321 ttagtaaaac cacgggcaag acgaatagca ctcatggttg cttctgttcc actgcttaca
     1381 aagcggatct tttctaaatg aggaaaatca gataaaacaa gcttggcaag ttcagtttct
     1441 aataaagttg gagctccaaa acttgaacct ttatgaagtg ctttttgaca agctttttgt
     1501 atatctttat cgcaatgtcc aaaaagcaaa ggcccccagc tttgaacata gtctatataa
     1561 gaatttccat ctatatcgaa aatataagca ccttttccat gagaaataaa ttttggctca
     1621 ctttgaacat ttgcaaaagc acgaactgga gaatttacac cacctgcgat gaatttacac
     1681 gcttctttaa aagctttttt gtttgtcatt tttcttcctt gctaaattgc ttgatgtaat
     1741 tatataaagt tacaatttca tcatttgtta aagagtaatt tggcatgatt gattttgcgt
     1801 ctttactctg attaagagaa tttttaaaat tttcaaaact aagattttgt atacttggaa
     1861 ctttataagc tgttttaata ccatttttca tataatatcc taaaatttgt tcgcttccat
     1921 ctgctccatg acattcttta caactaatgc cccttggatt ttcataaagc attttagagt
     1981 attctttaag agtgataaaa tcagcaccaa aaagactaat actaaataaa aaaaacatta
     2041 aaacaatttt caaagtttca ccttgttaat gaagttttaa tatgatacaa tttttacttt
     2101 aaaaaagtga ttaaatttat agaaggaaaa taatgacttt gcttgatggt aaagctttaa
     2161 gcgcaaaaat caaagaagaa ttaaaagaaa aaaatcaatt tttgaaaagc aaagggattg
     2221 aaagctgttt agctgttatc ttggttggag ataatcctgc aagtcaaact tatgtaaaat
     2281 ctaaggctaa agcctgtgaa gaatgtggaa ttaaatcttt agtttatcat cttaatgaaa
     2341 atactacaca aaatgaactt ttggcattga ttaatacctt aaatcacgat gatagtgttc
     2401 atggaatttt ggttcagctt cccttacctg atcatatttg taaagattta atacttgaaa
     2461 gtattataag tagtaaagat gttgatggct ttcatcctat taatgtagga tatttaaatt
     2521 taggcttaga aagtgggttt ttgccttgta ctccacttgg agctatgaag cttttgaagg
     2581 cttatgaaat tgatttagaa ggaaaagacg ctgttattat aggtgcttca aatatagtag
     2641 gtcgtcctat ggctactatg cttttaaatg ctggagctac agtaagcgtt tgtcatatta
     2701 aaaccaaaga tttgagcctt tatactaggc aagctgattt gattatagta gcagcaggtt
     2761 gtgtgaattt acttcgatcg gatatggtaa aagaaggagt gattgttgtt gatgttggaa
     2821 tcaatcgtct tgaaagtgga aagatagttg gagatgtaga ttttgaagag gtatctaaaa
     2881 aatctagtta tataactcct gttccaggtg gagtaggtcc tatgactata gccatgcttt
     2941 tagaaaacac agttaaatct gctaaaaata gacttaatta gggaaaatct atggaaattt
     3001 taaagaaatt atataaattt tcacagtctt ggactggaac tgtagttatt gttcttttgg
     3061 tgattttttt ctttatacaa gcttttgtta ttccttctgg ttctatgaaa aacaccttat
     3121 tagtagggga ttttttattt gttaaaaaat ttagctatgg tatcccaact cctcatattc
     3181 cttggttgga aattcctgtt ttgccggatt ttaataaaga tgggcatttg ataaaagcac
     3241 aagggccaca aagaggagat atagttgttt ttagaaatcc tagaaatgaa aaagaacact
     3301 ttgtaaagcg ttgtgtaggc acaggaggag ataggatagt ttatgcaaat aaaacacttt
     3361 atgtaagaat gcatgagggt gataaattta tgaaagaaca ttatccgaat gatcttgtta
     3421 ctcttggagg gcaaatttat gtaaaagaac cttataaaca aaaaggtatt cattatgatc
     3481 caaaaaaaga tatagaaagc gatattttac gctttcttag cataggtgat tttgccatgt
     3541 ctccagctta tattaaagaa cttggaaatc atataggttt tagcggcgga aatgcttatg
     3601 tttttgatgt acctgaaaat gagtatttca tgatgggtga taatcgcgat tattcttatg
     3661 atagtcgttt ttggggttct gttccttata ggttgatagt aggtaaacct tggtttgtat
     3721 atttctcttg ggataaaaat aaaaatgttc gctgggaaag gatagggcgt tttgttgata
     3781 ccttggaaaa tgatgagcaa tatatccatg atcatgatga tgaggataaa ttaagctaat
     3841 gtttgtgaaa aacacaaaca ttatattttt aaaagcgtga tttcatcacc tttttttaat
     3901 tcactcgtat tttcttcgct tataagcaaa aactcacttt taataagtgg aagtatcata
     3961 ccagagccaa atttgttttc gttaaatggt gtaaaaatac ctttttctaa atttcctaaa
     4021 atgagattat ttcttccgct tttaagcttt aaatccatac ccattttgcc ataaaatgtt
     4081 aaaggattgt ctaggtttcc acttaataaa ttaatgattt ttttagcaaa aataaaacaa
     4141 gaaagataag ctgccatagg gtttcctggt aaaatcaata cgaaattttc accttttcta
     4201 taaagcttag taggtcttgc agggcgtgct tttaaacctt taaaaagcgg agtaaagcct
     4261 aattcatcta aagctttttc cataaaatca gcctcgccaa cgcttgcacc tcctgaagtg
     4321 attaaaagat caaaatttgt attttctaaa gcctctttag tgcttttaaa atcatctttg
     4381 ataataccca aataagaagc attttgaagc atagttagta aaggcaaagc attggcatta
     4441 taaatacttt cttcatcgca ttcttgccaa ggttctttta gctcatttcc acttgaaaaa
     4501 atacctatgc gaatttttct tatgacttct attttataaa gcccttgaga agcaagcagg
     4561 gcgatatgtt tatcattaag tttggtacct ttttgaagta aaatttcacc tttttttaat
     4621 tcttcacctt tatagcgata ggcattgtat tgtttaggag cttttttaat gatgagttta
     4681 ttttcttcta tatactcatc ttctagcatt aagatagtat cagcattttt gggcatttta
     4741 gcccctgtca tgattttata gcattcattt ttagcaactg tataaaaatt tttatctcct
     4801 gcaaaaatag tccctttaat ctccaaagcc tcattgatat cagtataatt aaaagcatag
     4861 ccatcaagag cagcattgtc aaaactaggt agattttttc tagcgtataa atctttagct
     4921 aaaattctat cctttgcttt ttcaaggcta ataagctcac tttcatctaa acatgaaatt
     4981 tgattttcta agtcttttaa ggtttcaaag atatttttca ttcttcaagc cttgtgattt
     5041 tcgcacccaa atctttaaat ttttcttcta aattttcata acccctatca agatggtaaa
     5101 ttctatggac tttgcttgta cctttagctg caagagctgc taagataagg gctgaagaag
     5161 cgcgcaaatc tgtagccatg acatcagcag cgttaagttc ttttccgcct actatagtag
     5221 caatatgacc attgagttta atatccgcac ccattcttaa aagttcactt acatgcatga
     5281 aacgattttc aaatagtctt tcatcaataa tactagttcc attagctttt aaagctagtg
     5341 ccataaactg cgcttgcata tcggttggaa agcctggata ttcacttgtc atgatttcta
     5401 caggtttaat ttctttagca ggaagtaggg tgatactatc ttctgtaatc aaagtttcaa
     5461 aacccatttg atgaagtttt gctaaaactg cactaagatg agtggcgtta actttatcta
     5521 aagtaatttt agaatttgta atagcccctg cacaaagata agttcctgcc tcaattctat
     5581 caggtataac gctaaattct ttaaattcta aaagttctcc atcgctacca taaatttcaa
     5641 gttcatctgt acctatgcct ttaatttcaa gtcctgcgtc ttttaaaact tcgcaaagtt
     5701 gaactacttc gggttctttt gcaacattta agagtttggt tttaccttta gctagagctg
     5761 ctgccatgat gatgttttca ctacctgtaa ccgtgatttt atcaaaaaga atttcattgc
     5821 cttttaaatt tccactagct acgacatagc cttgtttgat ttgtatattt gcccccattt
     5881 tttctaaggc taaaagatgt aaatcaatag gtctttgtcc tatggcacat ccaccaggca
     5941 aagatacttc acaatgccca aaacgagcaa gcaaaggccc tagagtaagt atagaagcac
     6001 gcattttacg cacaatgtca tatttagcta tggtttgatt aagagtgttt gtgtttaata
     6061 aagcactatt gttttgaaaa ttgactttag ctcctaaatt ttctagcaaa gatataagag
     6121 tttttatatc agcaacatta ggaacattgt tgatttttac ttcattttta gcaagtatac
     6181 ttgaaacgat caagggtagg gcagcatttt ttgctccgct tattgtaaca tttccgctta
     6241 gatgatttgt gccttcgatt tctagataag tcatattttt ccttgaaaaa gtttaaaaat
     6301 gcatcattat agcattctta aacttttgaa aaaatataat caagcttgtt ggctttggag
     6361 ttcttgaatt tgagcttgaa tagttgaagc ttgggcattt aatgttgcta tttgactttc
     6421 aatacttttg atttgatcct cattagcttt agacattttc gcagttagtt caacaatttt
     6481 tgcttgaatt tctgcaagct tttgtgttaa ttctgtaagt ttatcttcac tattgctgct
     6541 actatcttgt tgcgtgttgt tttgtgcgtt taaagcttga gctggagctt gagaattgtt
     6601 ttgattagaa gtatttgatt tttctttggc ttctttgctg atatttacct ctacagctgg
     6661 atcttgcgct aaagcgtttt gttcttgatt tttagagttt tgattttctt cgtttgagtt
     6721 gactttaaca tattgactta agctatttaa ggaattgtta atttgcatat tttctcctta
     6781 atttataata tatattacac taaatcgaca ttattttaaa aaaatatact ataatttaaa
     6841 ataattttta ttaaggtttg caatgggcgt atttttagtt cttttgggag gtattttttg
     6901 ggctattagc ggtgttttag ctgaatacct ttttaaaaat aattatagcg tagattgggt
     6961 ttgtttttat aggcttttat ctacagggtt gattttgatt tttttaagtt ttaaagctca
     7021 aaagatttta gtttttacaa atttaaaaga aagcttaagt atttgtatgt ttggattttt
     7081 tgggcttttg ctaacacaat ttggttattt taaggctatt tattataccg atgctggaac
     7141 tgcaacaatg atacaatatt gtgcaccttt gattataatg ctttatttgt gctttaaaaa
     7201 taaaaaattt cctaaattga tagaaatttt tgctttgatt ttgattattt ttgctttgtt
     7261 tttgcttgca actaaaggag atattgaagc ggtggtttta aattattggg gtattttttg
     7321 ggctgttata ggagcttttg gagttgcttt ttattcttta agtgctagag aagtgatatt
     7381 aaaatatggt cttttttgga taatgggctg ggcgagtctt tttgcttctt ttgtattttt
     7441 attaatcttg caatttgata agggtttaat tcactatgct tttaacttaa aagcattttt
     7501 ttctatgggc gggattgtct ttatcggaac tataggggct ttttgtttgt atttaaaagg
     7561 agtggaatat ataggtgctc taagggctag tatgattgcc tctatagagc ctgtagcagc
     7621 tgctttgatg agttttttat ttttaaaaac ccgttatagc ttgcttgata tttttgcttt
     7681 tgttttgatt atattgagtg ttattttaaa tgcaaaaaag actaaagttt cataaagttt
     7741 ttaagtattt ttttgccttt ttgagttaaa accgcttcgg ggtgaaattg caatccataa
     7801 ataggatatt ttttatgttt aattgccata ataatatttt ctgaattatg agctaaaatt
     7861 ttgcattttt cagacatgga actaatgtgt aaagaatgat ataagcaaat ttcaatttct
     7921 tttttaatac ccttaaaaat aggatctttt ttaaaataaa gtttagaaat tttaccatgc
     7981 atgggatttt gcattttaga aaccctaccg ccaaaaattt cagctataca ctgatgtcct
     8041 aaacatatac ctaaaatttt tttatttttt ttaaaatatt tgattgcttt taagcttaat
     8101 ttagattcct taggagaatg agggccagga gagatgataa gatgagtgaa atcaaatttt
     8161 tctaattctt tagctttttt aaaggcatca ttttttatca ctttacattc aaaaccaagt
     8221 tctttaagat aatagatgat ggtataacta aaagaatcat aattatctat aaataaaatt
     8281 ttcttcattg taattttacc ttttttaaac cacgcacgga attaatacaa taaatatttt
     8341 ctgcttcaaa taaatcttgt ttaaataatg ctttttcttt tatcaaacca agattgatta
     8401 agaaatttct atatactcca tttaacatac cgctttgaat ttgtggagta taaaattgag
     8461 agtttttttc taagatgaga ttggttcttg agccttcgca aagttcatct ttttcgttaa
     8521 aaaaagctat gtcataacac aagttttgct gccatttgta tgagtgttga ttataaaaag
     8581 tacgcaaaga gcttttgtga tagagattgt cactttttga gttaatttta tcatcactta
     8641 aaagcaaaat atcgtttgaa ttttgcttta aggcactttg ttgaaattcg tatcttccgt
     8701 ctttgtataa aataagcttt aaaattcctt ctttatgtgg atttttaaag ggtaggggaa
     8761 aattataaaa taaagagtgt tttttgtgga aaattttttc atcgagttta aaaagtgtaa
     8821 aattttgata ttctttataa gaactttttt gatttaaaac attataaaaa tctttaaaga
     8881 gcttgtgagt attaaaatta aatttaagag ctgaatttat aagccttaat aaatgttctt
     8941 ttaaaaataa aatttgagaa tttttaaaat acatggtttc aaaaagatga aaatcacaag
     9001 gatttaagat cgcgctttta agttttaatt cttcgaattc atctttgaat tttgagtccc
     9061 aaaccaagcc actaccggtg ctataagtat aaatttcatc ttgtttttct aaggtgcgta
     9121 tggctacgct aaatttattt ttatttttgt gtattaaacc tatagttccg cagtaaatac
     9181 cacgatctct ttgttctaat tcttcaataa atttaatact ttcaagcttt ggagcacctg
     9241 taatagaacc acaaggaaag agagctttaa aaatttgata taaagaaata ttttttttaa
     9301 gttttccttg tacacttgaa gtcatttgat gtaaagtagg gtgactttga atttcaaaaa
     9361 gttttgtttt taagcttttt tttgtgatga tttttgaaag atcgttgcgt aaaagatcac
     9421 aaatcataac attttcactc agattttttg tatcattttg caagaaaatt ttattttctt
     9481 catcttttat aggatcttta tcacgcttaa ttgtgccttt cataggtttt gtaaatattt
     9541 ttcttttttt ggttttgaag aaaagttcag gagaaaagga taaaatttct cttgtttcat
     9601 cttttataaa agctttaaat tcagtatctt gtctagaaag caaaagttta aaaagttcaa
     9661 aagaatccat tttgctatga aatttaaaat tttgagtaag gttgatttga taaactcttc
     9721 ctttggagat tgcctcttta accttga
//
LOCUS       DARATF010000062         9626 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.062, whole genome shotgun sequence.
ACCESSION   DARATF010000062 DARATF010000000
VERSION     DARATF010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9626
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.062"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            20..715
                     /locus_tag="SB502_001243"
     CDS             20..715
                     /locus_tag="SB502_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEG0434684.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLEDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLSEKFPNVESFSEALELNNQAKKSSKEIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            712..1965
                     /locus_tag="SB502_001244"
     CDS             712..1965
                     /locus_tag="SB502_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEG0434685.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHKCGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     ESKFESSKYEKEITTLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGS
                     FFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDKYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            1966..2460
                     /gene="purE"
                     /locus_tag="SB502_001245"
     CDS             1966..2460
                     /gene="purE"
                     /locus_tag="SB502_001245"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEG0434686.1"
                     /translation="MNFVSILMGSKSDYETMKEAVKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMSGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            2470..3006
                     /locus_tag="SB502_001246"
     CDS             2470..3006
                     /locus_tag="SB502_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HEG0434687.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            3018..3881
                     /gene="glyQ"
                     /locus_tag="SB502_001247"
     CDS             3018..3881
                     /gene="glyQ"
                     /locus_tag="SB502_001247"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEG0434688.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNEAE"
     gene            3868..4593
                     /locus_tag="SB502_001248"
     CDS             3868..4593
                     /locus_tag="SB502_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEG0434689.1"
                     /translation="MKLSEIYNFLDQLSPFDIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMICKNISLISMHTNYDL
                     SHLNIYFTEEILGFKISFKDEFLIYVENSISFEALCDWVKKKLNLQILRVSNCGKKDI
                     KRIAICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQVIITVSKNPFQYF"
     gene            4603..5319
                     /locus_tag="SB502_001249"
     CDS             4603..5319
                     /locus_tag="SB502_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEG0434690.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINT
                     DLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            5316..6473
                     /gene="waaA"
                     /locus_tag="SB502_001250"
     CDS             5316..6473
                     /gene="waaA"
                     /locus_tag="SB502_001250"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEG0434691.1"
                     /translation="MIFFYYFLTWAAFLFCAVFILLLSFLKSKYKTSLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKTLVLKFDSRITTITQTGFEYAKEFCKKVNYLAFENFL
                     PFWFKPCKVLVIFEAEYWLMLVFMAHIYKTKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYIDEVFAQSELDKVRLESLGAKNVKIFKNIKANLEIKNNKIYTKPKEKLIIFASTHK
                     DEEELLLDHFKLEENEKLIIAPRHPERFKEVENLLLNKGLEFEKFSSLKDENKKFAKK
                     ILLLDALGELVNFYAISDVVVLGGSFIEGIGGHNPIEVAYFDNVLISGKFIHNQKALF
                     EEVENVYFCENLKDLNDKIHYLNLKVKISKKENLDLIIQTIQKGIDARKSL"
     gene            6454..7206
                     /locus_tag="SB502_001251"
     CDS             6454..7206
                     /locus_tag="SB502_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0434692.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKARFNVIKTKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKAKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLTKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFDYYFKAELDNSFAKVGFEIKNLDF"
     gene            7274..8611
                     /gene="ffh"
                     /locus_tag="SB502_001252"
     CDS             7274..8611
                     /gene="ffh"
                     /locus_tag="SB502_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEG0434693.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDVKQNGIGQKQFLNAIKVNLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMNELKVVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEVLGISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIHIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            8677..8904
                     /gene="rpsP"
                     /locus_tag="SB502_001253"
     CDS             8677..8904
                     /gene="rpsP"
                     /locus_tag="SB502_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEG0434694.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            8907..9149
                     /locus_tag="SB502_001254"
     CDS             8907..9149
                     /locus_tag="SB502_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEG0434695.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTAISAYKSKDASSYRVTVKALE"
     gene            9142..>9626
                     /gene="rimM"
                     /locus_tag="SB502_001255"
     CDS             9142..>9626
                     /gene="rimM"
                     /locus_tag="SB502_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HEG0434696.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNTSNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNID
                     I"
BASE COUNT         3610 a         1073 c         1834 g         3109 t
ORIGIN      
        1 atttaaaaaa gggaaaaaaa tgactcaaga agagcttgat gctttgatga atggtgatgt
       61 tgatcttgat tcagagacag aagcagaggt aaaaaccgaa gaatcgaata ccgaagaaga
      121 tgctttgatg ttagaagatg tcaaaatagc tgattacaaa cctaatccta gcgtggtatg
      181 gccaccaccc ccaccaaatc aggagcataa agttgtacat cagttagatg atgttacaaa
      241 agatagcgag cttaaagcaa cggaaatgat ggataagctt gaaagtatta ataatttttt
      301 tgcggattct gaaagtttac tcaaagagat aaataaagca atagaaaaaa atattgatat
      361 tttttctaaa cttagtgaaa aatttcctaa tgtggaaagt ttcagtgaag ctttagaatt
      421 aaacaatcaa gctaaaaaaa gttctaagga gattgtcgga aatcttcaaa gcggacaaga
      481 tgaagtgatg atggcaatgg atgcaatgca gtatcaagat atacatcgtc aaaaaatcga
      541 acgtgttatt aatgtaatgc gtgctttaag ccgttatatg agttccttat ttgaaggtaa
      601 aattgatgat aaaaaacgtg taagttctgc agtgcatatt gaaggtgata gtactgctga
      661 tgttgtaagt aatgatgata tagaagcttt aattgcaagt ttagggcaaa aatgatcatt
      721 cctgaaatag tagctcctgc aggaaatttc acaaaattaa aaattgcttt agcttatggc
      781 gcagatgcgg tttatgcggg tgtgaataat ttttctttaa gatcacgcac tgcaagagaa
      841 tttaattatg aaagttttga agaagctatt aaatataccc ataagtgtgg taagaaaatt
      901 tatgttactt taaatggttt tcatttaagc tcccaaattg aaggtttaaa aagacatatt
      961 ttaaaattgc gtgagatgaa acctgatgct tttattgtag cttctgttgg agctatgcgt
     1021 cttgttaaag aacttgcacc tgaaatttct ttacatgttt ctactcaggc aaatatttta
     1081 aattatttag atgctcaagt ttataaggat atgggtgcta aaagggttgt aattgccaga
     1141 gaattagggc ttaaagacgc taaagcttta aaggaaaatt gtgatattga acttgaagct
     1201 tttgtgcatg gttctatgtg ttttgcttat tcagggcgtt gtttaataag ctctgtgcaa
     1261 agtggaagaa tgagcaatcg tggatcttgt gcaaatgact gtagatttaa ttatgagctt
     1321 tatgctaaaa atccagaaaa tggcacttta tttcgcttag aagaagatga aaatggtact
     1381 catgtgttta attctaagga tttaaatctt tgttcttata tagaaaaaat catgcaagaa
     1441 aattgtatca gtgcttttaa aatagaaggg cgtactaaaa gcgaatatta tgttgcgctt
     1501 acaacaagga cttataaaat ggccatacaa gatgctttag agagtaaatt tgagtcaagt
     1561 aagtatgaaa aagagattac tacacttaaa aatcgtggtt ttacagatgg ttatcttgtt
     1621 tcgcgtcctt tagaaaaaac cgacacgcaa aatcataata caagcataga agaaggttct
     1681 catcaagtgc atgctataag cgaagatgga agctttttta aatgtaaagg gaaaatcgtt
     1741 ttaaacacgc cttatgaaat tttagcccct ttaggcgatg tgattcaaac ttgcgataat
     1801 gaactaggta aaatttatca aaaagaggat aaatatttta tagagtttaa aaaactcatt
     1861 gctaaaaaca ataaagaatt tagcgaaatt catagtggca atgaacatga aatccaatta
     1921 ccaaataaaa tcagtgcatt aagtttttta agaaaggaaa tatagatgaa ttttgtttct
     1981 attttaatgg gaagcaagag tgattatgag actatgaaag aggctgttaa aactttagaa
     2041 agttttgggg taaagtatga acttatcatc tcatcagctc atcgtagtcc aaaaagaaca
     2101 aaagagtata ttgcaaatgc tgaagaaaaa ggtgcgaaag tttttatagc agcagctgga
     2161 atggcagcgc atttagctgg agctgttgca gcttatacaa caaaacctgt tttgggagtg
     2221 cctatgtcag gaagcaatct tgcaagtatg gattctttat tttctacggt gcaaatgcct
     2281 agtggaattc ctgtaggaac tttagctatt ggtaaggctg gagcgatcaa tgctgcttat
     2341 ttggctatgc aaattttagc tatttatgat gttgatttag cacaaaagct taaagaagat
     2401 cgtcttgaaa aagaaaaaaa acttgtatct gattcaaaag aagtagaagt tttattataa
     2461 gggataaaaa tgcaaaccta tcttgaactt gaagaatttt gtaaacttgt gcatttaaat
     2521 gaagatgtgg ttaagggtat gatggccaat ggggctttaa attttaaaga agaagagggt
     2581 aaaatttaca tcgaagctca tcaaggtact tttagtgtag tacctagttc tgcaaaatct
     2641 caaactgcaa tggtaaattc aatgacttta gcaggagaaa gttttgttga aaaaacaata
     2701 ggaactattt taaatttgca tgaaaaagtt ttagatgcta aagatgaaac acttgaagca
     2761 ttaaaaaatg agaataaatt tttaaaagac gctctttatt ctatgcaaga actttatgat
     2821 gaagatagaa aaactataga aaccttaaac aatgagctaa aacatgcgcg tgaagagata
     2881 gaatttctca agcgtaaata taaattaatg tggagtaaaa ccgcagaaat ttttggagct
     2941 aagacagagc ctgatttgga aatgaataaa aatttagaaa aacctattga aaatatggaa
     3001 caataaagag agatgcaatg actttttcac aaatgatact taatttacaa aattattggc
     3061 aagagcaagg ttgtgcgatt atgcaacctt atgatatgcc agcaggtgca ggaacctttc
     3121 atccagcaac ttttttaaga agtttaggaa aaaaaccttg ggcagctgct tatgtggctc
     3181 caagtagaag gcctactgat ggacgttatg gtgaaaatcc taatcgctta ggtgcttatt
     3241 atcaatttca agttttgatt aaacctagtc ctgataatat ccaagaatta tatcttaaaa
     3301 gtcttgaaaa tttgggtttt gatttaaaaa gtcatgatat tcgttttgtt gaagataatt
     3361 gggagagtcc aagtttgggt gcttggggtt taggctggga agtatggctt gatggtatgg
     3421 aagtcactca atttacttat tttcagcaag ttggcggtat agcagtagat ttagtaagtg
     3481 ctgaaattac ttatggtctt gaaagaatag ccatgtatct tcaaaatgtt gataatgttt
     3541 atgatatagt ttggagtgaa tttaatggag aaaaaattaa atacgcagat gtgcataagc
     3601 aaagtgaata tgaatttagt aaatacaatt ttgaagtaag tgatgttaag atcttaaatg
     3661 agcagtttga aaattcttac aaagaatgta aaaatatttt agaacaagga ctagctttac
     3721 ctgcttatga ttattgtatg cttgctgcac atacttttaa tcttttagat gcaagaggag
     3781 caatttctgt agcacaaaga caagattata tgttaaaaat tcgtgaactt tcaaaaaatt
     3841 gtgctgaaat ttataagaaa aatttaaatg aagctgagtg aaatttataa ttttttagat
     3901 caattaagtc cctttgatat ccaagaatca tgggataata gtggaatttt gcttggagat
     3961 agggatagtg aaatttcaac tgtttattta agcttagata ttgatgaaaa tatcattaaa
     4021 gaagcgagtg aaaattcttt aattatcaca caccatcctt tgatatttaa aggtttaaaa
     4081 gatttatatg acaagactta tcctagagct tttattaaag aaatgatttg taaaaatatt
     4141 tctttaatca gcatgcatac aaattacgat ttaagtcatt taaatattta ttttacggaa
     4201 gaaattttag gttttaaaat ttcttttaaa gacgaatttt taatttatgt agaaaattct
     4261 atatcttttg aagctttgtg tgactgggtg aaaaaaaagt taaatttaca aattttacgt
     4321 gtaagcaatt gtggtaaaaa agacattaag cgtattgcta tatgtactgg aagtggcggg
     4381 gatttaattt ctaaagtaga tgcggattgt tttttaagcg gagattttaa atatcatcaa
     4441 gctttagagg cacttagtaa tcaaatcagt cttattgatt tgggtcattt tgaaagtgag
     4501 agatattttt ctcaatgttt agcaaaagac ttgaaaaatt tgccgctaca agttataata
     4561 acagtttcaa aaaatccatt tcaatatttt taaggaaaat aaatgaataa atatctcgaa
     4621 caattagtgc ttttatcaaa aatagatcaa gaaattgata gttatgaacc aaaaatagac
     4681 agtattaata ggactttaaa agatgctgag ttaaaaatag gaaaaatcaa cacagattta
     4741 gaaaaaatcg atgaagaaat caaagatata gaaaatcaaa aagtacaaaa taatgctcat
     4801 atttctgagt tttcggcaaa aattaaagag ctttctaaaa aaagtggtgc agtaaaaaca
     4861 gaaaaagaag ctaatgcttt aaaaattgaa gaagatattg caaaagagca attagacgct
     4921 gcaaatgatg aaattgtaag actggataaa attttagaga ataaagaaac ttataaaaaa
     4981 gaacttgaag aagaaaaaat taaacaagag caaaatatta atgagattag agtaagcatt
     5041 aaatctgaaa tggaagttct tgaaaaagat agaatgagtg tttatgataa aaaaaccaaa
     5101 cttgtgggcg agatgaatca aaaagtttta agtttttatg aaaaaattcg caaatgggcg
     5161 aaaaatactg ctgtagttcc tgttaaaaaa caagcatgct atggatgttt tatgaaaatt
     5221 tacgataaga cttatctgtc tgttgtaaaa ggtgaagaga ttgtaacttg ccctcattgt
     5281 ggaagaattc tttataaaga gcaagaagaa caaaattgat ctttttttat tattttttaa
     5341 cttgggcggc atttttattt tgtgccgtct ttattctttt gctttctttt ttaaaatcca
     5401 aatacaaaac tagtttaaaa tcccgatttt ttctttataa aaatttacat caagaaaaag
     5461 ctgatgtaca ttttcatgct tgttcttacg gggaggtaag aagtattaaa actttggttt
     5521 tgaaatttga ttcaagaata actactatta ctcaaacagg ttttgaatat gcaaaagaat
     5581 tttgtaaaaa ggtaaattat cttgcttttg aaaatttttt gcctttttgg tttaagcctt
     5641 gtaaggtttt ggtaattttt gaagcagaat attggcttat gcttgttttc atggcacaca
     5701 tttataaaac taagattatt ttgcttaatg caagaatatc tgataaatct tatcattctt
     5761 atcaaagatt ttcttttttt tataaaaaaa ttttttctta tattgatgaa gtttttgctc
     5821 aaagtgaatt agataaagta agacttgaaa gtttgggagc taaaaatgtt aaaattttta
     5881 aaaatattaa ggcaaattta gaaattaaaa ataataaaat ttataccaag cccaaagaaa
     5941 aacttatcat ttttgccagt actcataagg acgaagaaga gcttttgctt gatcatttta
     6001 aactagaaga aaatgaaaaa ctcattatcg ccccacgaca ccctgagcgt tttaaagaag
     6061 ttgaaaattt gcttttaaac aaaggtttgg aatttgaaaa atttagttct ttaaaagatg
     6121 aaaataagaa atttgctaaa aaaattttgc ttttagatgc tttaggagag cttgtaaatt
     6181 tttatgcaat ttctgatgtt gttgtgcttg gaggttcttt catagaaggc ataggaggac
     6241 acaatcctat agaagtggca tattttgaca atgtattaat cagtgggaaa tttattcata
     6301 atcaaaaggc tttatttgaa gaagtagaaa atgtatattt ttgcgaaaat ttaaaagatt
     6361 taaatgataa aattcattat ttaaatttaa aagttaaaat ttccaaaaaa gaaaatttag
     6421 atcttattat acagaccata caaaagggaa ttgatgcaag aaaaagctta taaactctta
     6481 gctttgcaag aaaaaatttc aaatcgtgaa gctaaagatt tgattgataa gggttgtgtt
     6541 ttttcacatg gaaaaaaagt tgtggttgct agagctttga tgagcgataa ggcaagattt
     6601 aatgtgataa aaaccaaaaa tcctcaaatt atttttgaag atgataagat tattgctatt
     6661 aataaacctt atgcttatgt gagtgaagac ttggagaaaa aatttaatgc caagctttta
     6721 aatcgtttag acaaagaaac aagcggtgtg attttgcttt gcaaagatga agattttaga
     6781 aagctttgta tagaagaatt taaaaaacat agagtttata aaagttatat tgcggtttta
     6841 gatggggttt tggctgaaga ggttgaagtg aatgagccta tttttaccat aaaagcaaaa
     6901 ggcggggcgt taagtaaagt ttcaaaagat ggtttaagtg ccttaagcat cattactcct
     6961 attatgatgc agtcaaaaaa aaccttaaca aaaatagtca ttcaaacagg tagaactcat
     7021 caaatcagag tgcatgctaa atttataaaa catggcgttg taggtgatga aaaatatgct
     7081 aaaatttcaa gcgatagaat gtatttacat agttatgaaa ttaaaatttt tgattattat
     7141 tttaaggctg agctagataa tagttttgca aaagttggct ttgagataaa aaatttagat
     7201 ttttaaagcc atttaagaaa aaattttgta taatgcaagg tttaatttaa aaattttata
     7261 gaaaggtgat aaagtgtttg agttagttag cgaatctttt aaatcagcga ttaataaatt
     7321 acgttttgtt gatgatgaaa aagcacttaa gaacgcttta gaaaccttaa aaaaagctct
     7381 tttaaaagca gatgttcacc ataaggtaac taaagagctt ttgactttga tagaagaaga
     7441 tgtaaagcaa aacggaatag gtcaaaaaca atttttaaat gccattaaag taaatttaga
     7501 aaatatttta agtgtcaatg gcaaaaatca aggttttgtt tttgcttcta aacccccaac
     7561 agtagttcta atggcaggtt tgcaaggggg cggtaagact acaagcacta tcaaacttgc
     7621 aaattattta aaattacgca ataaaaaagt tttagttgca gcttgtgatt tacagcgtct
     7681 agcggcagtg gagcagctaa gacaactttg tgaagctaat gaaattgaac ttttctttat
     7741 agaaaatgaa aaagatccta ttagggttgc taaagaggct ttaaaaaagg ctgaaagttc
     7801 tatggtggat gttttgcttg tggatactgc tggacgtttg gctatagatg aggctttgat
     7861 gaatgaatta aaagtagtta aggatgtttt aaatcctgat gagattttct atgttgctga
     7921 tgcaatgagt ggtcaagatg gggttaagac tgcggctagt tttaatgaag ttttaggtat
     7981 cagcggggta attttatcaa aatttgatgc agatactaaa ggtggagtag ccttaggtat
     8041 agcaaaacaa atcggtattc ctttaagatt tattggtgtg ggtgaaaaag tagcagattt
     8101 agaagttttt ataccagatc gtatagtaag tcgtattatg ggtgagggtg atttggcaac
     8161 tttagctgaa aaaactgctg cgattattga tgaaaaagag gctaaaaaac tcaatcaaaa
     8221 aattaaaaaa ggggagttta attttaatga ttttcttaat caaatggaaa gtattaaaaa
     8281 attgggaagt atgaagtctt taatcggtat gataccagga cttggtggaa tggcaaatgc
     8341 ggtaaaagat atagatttgg ataattctaa agaaattata cacattaaag caatgatttc
     8401 ttcaatgact ccaaaagaaa gagaaaatcc tgatttatta aataatgcta gaaagcgtcg
     8461 tatagcagag ggagcaggtc tttctcaggt agaagtcaat cgttttttaa aacaatttag
     8521 caatgcagca aaacttgcaa aaagattttc aggtaaaaaa ggaatggaga gtttgacaca
     8581 aatgatgagt caagctagaa gacaatttta aattttattt ataaatactt tttatagtat
     8641 ctataaataa aatttttaat tttttaagga gtataaatga cagttattag acttacaaga
     8701 atgggtagaa ccaaaagacc attttatcgt attgtagtta cggacagtag aaaacgtcgt
     8761 gatggtggtt ggatagaaag tattgggtat tataatccta tggtagaacc tgaagtaatt
     8821 aaagttgatg cagagcgttt agcttattgg aaaagcgttg gtgcaaaact tagcgataaa
     8881 gttgcttcta tcactagcaa ataatcatgg tagagaattt tcttagagaa tacgcaaaat
     8941 taattgcaga ttatcctgaa cagattgata ctcaaaaaat tgaattaagt gaaaattttt
     9001 ttgagattgt tctttttgca cataaggttg atacaggtaa gcttataggt aaaaatggaa
     9061 aaatgatcaa tgctataaaa actgcaatct ctgcttataa gagcaaggat gcaagttctt
     9121 atagagtaac ggtaaaagca cttgagtgaa aaagattttg ttcaagttgc aaaacttggt
     9181 aaaactgtgg gtcttaaggg ttatgtaaaa ttgcataacc tgagcgactt ttcttctcaa
     9241 tttaaaaaag atgctacttt ttttataaaa aacactaaag aaatgttaaa gattaagcat
     9301 tataatacaa gcaattctac tgttttattt gaaaattatg aagatataga aaaggccaaa
     9361 gaattaacta atcttattct ttttcagagt atcgagaaaa gtagacaaac ttgtaaatta
     9421 aaaaaagatg agttttttta ttttgatatt ttagagtgtg aagtttttga agaagataag
     9481 agattaggta aagtggttga tatcttggaa actggagctt cttatttatt tgaaattcaa
     9541 agtgatgaaa aatgggttga aaaaaaatat cctaaaatat tttttattcc atatttagat
     9601 aaatttgtta aaaatataga tataga
//
LOCUS       DARATF010000063         9512 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.063, whole genome shotgun sequence.
ACCESSION   DARATF010000063 DARATF010000000
VERSION     DARATF010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9512
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.063"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            165..878
                     /locus_tag="SB502_001256"
     CDS             165..878
                     /locus_tag="SB502_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEG0434697.1"
                     /translation="MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            853..1044
                     /locus_tag="SB502_001257"
     CDS             853..1044
                     /locus_tag="SB502_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEG0434698.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWEKYYIKAE"
     gene            1044..1586
                     /locus_tag="SB502_001258"
     CDS             1044..1586
                     /locus_tag="SB502_001258"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEG0434699.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARI"
     gene            1635..3848
                     /locus_tag="SB502_001259"
     CDS             1635..3848
                     /locus_tag="SB502_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEG0434700.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KAKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            3845..4486
                     /locus_tag="SB502_001260"
     CDS             3845..4486
                     /locus_tag="SB502_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0434701.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            4483..5415
                     /locus_tag="SB502_001261"
     CDS             4483..5415
                     /locus_tag="SB502_001261"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEG0434702.1"
                     /translation="MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            5582..6364
                     /gene="fdhD"
                     /locus_tag="SB502_001262"
     CDS             5582..6364
                     /gene="fdhD"
                     /locus_tag="SB502_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEG0434703.1"
                     /translation="MDPLFTTQILKYKGDESFTCNDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDAKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKARLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            6357..7094
                     /locus_tag="SB502_001263"
     CDS             6357..7094
                     /locus_tag="SB502_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEG0434704.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNINIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKTYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRAMELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
     gene            7207..9309
                     /gene="ccaA"
                     /locus_tag="SB502_001264"
     CDS             7207..9309
                     /gene="ccaA"
                     /locus_tag="SB502_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HEG0434705.1"
                     /translation="MFKSLNIGLKLIFSVATVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAMPIFDRKNQVVGVIGMTLD
                     FSDIATYLLDPKGQKYDGELRVLLNSDGFMAIHPNKNLVLKNLKDINPNKGAQETYKA
                     ISEGKNGVFNYIASDGDDSYAAINSFKVQDSSWAVLVTAPKYSVFKPLKKLQLIILGA
                     SFIFIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGA
                     MGRIINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKNVL
                     NRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEVFNAKGEVEITTNILGKEIKKMLLA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITN
                     EVNQIAAAILEDVNKKRF"
     gene            9420..>9512
                     /locus_tag="SB502_001265"
     CDS             9420..>9512
                     /locus_tag="SB502_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEG0434706.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILE"
BASE COUNT         3387 a         1170 c         1886 g         3069 t
ORIGIN      
        1 atattttaaa tccttgtgga attttattga aattcagtga tttttaaatc aaatagtatt
       61 aagataaatc gatttaaaaa tcggctttaa aatgaatatt aggtatattt tgcataatat
      121 tcattcaagc aaaatttaaa gctatttttg aaaattttga atgcatggga gctttaatgg
      181 atttggaaaa attaagatta gctagaagtc tttattatca atgtctagga gagctttttg
      241 ttttttcatt ttctgaagaa agattgtcaa aattacaaga gtatttaaag acaatgcaag
      301 aatgtttatt tgatgaaaat ttaaaatcaa attttgatat cttgcttaag catttagatg
      361 atgaaaattc tatacaagca ttttttaaag aatatgattt gcttttttta agtcttaaaa
      421 atagcattcc aacgactttt tcttacatag aagaaggttt tgaaaattca aatcctttac
      481 tttgcgtgcg tcaaatttta gtcaaaagta aaataagacg caatgaaaaa ttttttaaag
      541 aaagtgaaga tagtgttgga ttttgtttat tgttgatgag tgaattttta aggcaaaatg
      601 aagatgattt agccaaagag ctttttgaaa aagtgatcaa taaaagcatt gatgagtttt
      661 taggcgatgt tttcatgaat aaaaatgcga atttatataa ggaaattgca agtattgcat
      721 cggcttttat ggaatttgaa agactttgct ttgaagtgga aaaacctgca aaaataaatt
      781 ctaaaaaagt gcaaaacgat ctatcgcgtt cagaattttt aagaagagaa gcaaataaac
      841 aaaggaggac tcgtgaaaaa tcgcagggaa tttcttaaaa aatccgcttt tgccttaggg
      901 gctgctggag tgcttggtag cacgacttta gctctagcta aagatgaaga aagaaaagat
      961 ttggttaaag gtaaaagtaa gaaaaaagaa gtgctttttc aaagaagtgc taattgggaa
     1021 aaatattata taaaggctga gtaatgtcaa gtgtaggtga aaatatcaag cttacgcgtc
     1081 gttcttttct taaaatggca gcactttcaa gcctagcaac accgttgctt gctagaagtg
     1141 aaactttaag agaagcgagt gctgatgagc ttaaagaagc gtatgaaggt agtaaaaaag
     1201 taaaaacagt ttgtacagcc tgttctgtag gctgtgggat tattgcagaa gtgcaaaatg
     1261 gtgtttgggt gcgtcaagaa attgctcaag atcatcctgt gagttcaggt ggacattgct
     1321 gcaagggatc tgatatgatc gatatggtgc gttcacatgt gcgtttaaaa tatcccatga
     1381 aaaaagaaaa tggagaatgg aaacgcataa gttatgagca agctttaagt gagatcggag
     1441 aaaaactagc tgcttatcgt aaagaaaatc ctgaaagtgt tatgttttta ggttctgcaa
     1501 aacttaataa tgaacaagct tattatataa gaaaatttgc agcatttttt ggaacgaaca
     1561 atgtagatca tcaagctaga atttgacaca gcgcaacagt cgccggtgtg gcgaatacat
     1621 ttggttatgg cgctatgaca aaccatcttg gagacattca aagaagtaaa tgtatcatta
     1681 tcattggagc aaatccagcg gtaaatcacc ctgtgggttt tagacatttc ttaaaagcaa
     1741 aagaaaaagg tgcaaagctt attgttgtag atcctagatt tacaaaaagt gcagcaaaag
     1801 cggatattta tgcaagaatt cgtccaggaa ctgacattgc tttcatgtat ggaatgttaa
     1861 aaatcatttt tgatgaaggc ttggaagata caaaatatct tgatgaaaga gtttttggaa
     1921 ttgataaaat tcgtgaagaa gcagcaaaat ggacagctga agaagtggaa aatgttacag
     1981 ggatctctaa agaacttttg gtgcaaatca ctcacgaagt agctaaaaac aaaccaacta
     2041 cgcttatttg ggctatgggt ttaactcaac atactgtagg aacttcaaat acacgtttag
     2101 cacctattgt gcaaatggta cttggaaata taggtaaatt tggtggtgga gttaatatct
     2161 tacgcggaca cgataatgtt caaggtgctt cagatatggc ttgtttgagc gaaaatttac
     2221 caggttatta tcctttaaat gaagcgactt ggagatacta tgccaaaatt tggggtgtgg
     2281 attatgagtg gcttttagga aattttgtaa gcaaagattg gatgcataaa actgggcttt
     2341 cacttgctag atggtgggca gcggctttaa atggaaaaga tggaaatgat gctatcgata
     2401 atgcaggaac gcctttaaaa gctttagtag ttatgggaaa tggtattact tcgactgcac
     2461 aacaagtaaa agttaaagaa ggtttggaag ctttagagct tttagtttta gccgatcctt
     2521 ttgtaaatga agcagggatt attgcagaaa gaaaagatgg aatttatctt ttacctgcag
     2581 caacacagtt tgaaacaagc ggaagtgtaa cagcaacaaa tcgtagcgga caatggagat
     2641 ttaaagttgt agatccactt tatgaaagca tggaagatca agaaatttta tttgagcttg
     2701 ctaaaaaatt aggtttttat gaagacttta ccaagacttt acgcgatgaa aaaggtgaga
     2761 ttgtttggcc tgaaaatgca acaagagaaa ttgcaaaagc agttagaagt atagggctta
     2821 atggttggag tcctgaaagg cttaaaaagc atactttata ctgggataaa tttgatgagg
     2881 taactttaga aggaaaagac gaagttgctg gcgagtatta cgggcttcct tggccttgtt
     2941 ggagtgataa gcacccaggt tctcctgtgc tttataatac cgacattgaa gtagcaaaag
     3001 gtggtatggg ctttagaaac aattttggac ttgaatatga aggagagagt ttacttgcta
     3061 aaaatgcacc tttaaattcg cctattgata caggttatcc acaaattact aaagataata
     3121 tagaaaaagt tttaggcatt actttaagtg cccaagaaaa agctaaaatg ggatcaactt
     3181 ggtcttatga tgatagtaat atcatagcaa ctaaatgtat agaaaaaggc atagttcctt
     3241 atggaaacgc taaagctaga gctgtagttt ggacttttaa agataaaatt ccactccacc
     3301 gtgagccttt acattctcca agaaacgatt tggtgcaaaa atatccaagt tttgaagatc
     3361 aaaaagcgct ttaccgcgtg gatactaaat ttgtttctgt gcaacaagct aaggattatt
     3421 ctaaagaatt cccgcttaat cttgttactg caagacttgt gaatttaaat ggtgcaggta
     3481 tggaaaatag agcatctatg tatctaacgc gtttaacacc tgaaatgttt tgtgagatca
     3541 atcctgaatt agcaaaagag caagacatta aagcaggaga tatgatttgg gtgcattctc
     3601 cagaaggtac taaaattcat gtaagagtga aggttaatcc aggtgtagca aaagatatga
     3661 ttttcttgcc tttccatttt acaggagtta tgcaaggcgt ggatttaacg cacaatttcc
     3721 cagaaggaac taagccttat gcaagcggag aaagtgctaa tacggtaaca aattatggtt
     3781 atgatatcat gtgtcagatt ccagagacta aaggtggact ttgtagaatc agtaaggatg
     3841 gaaaatgagt aaggtaaatt ttgcaaattt agaaaaagaa cgcttgaaat tcttttgtga
     3901 taatgagcgt tgtattgatt gtaatggttg cgcggtagct tgtgatgaag cacatgagct
     3961 tcctattcat attcgccgcc gccgtgtgat tactttaaat gaaggaattc aaggaaaaga
     4021 agtttcaact tctatttctt gtatgcattg tgatgatgct ccttgttcta tcgtttgtcc
     4081 tgtggattgt ttttacatcc gtgctgatgg tattgtttta cacgataaag aaatttgcat
     4141 aggttgtgga tattgtcttt atgcttgtcc ttttggtgca ccacaatttc caaaagatag
     4201 tgtttttgga aataaaggca ttatggataa atgtactatg tgtgcaggtg gccctgaagc
     4261 aacgaattca gaaaaagaaa gagaacttta tggtcaaaat cgtatcgcag aaggaaaagt
     4321 ccctgtatgt gctgcgatgt gttcaacaaa agcactttta gtaggtgaaa gttctaaaat
     4381 agaagagatt tatcataata gacttatgaa tagaaattat ggcattccaa atccttcgga
     4441 aagtttggaa tggaagattg cttacacagg aaaggaacgc ttatgagaaa agtatttgta
     4501 acgcttttat taagcgtagt gagtttattt gcttatggta gcgagagaat gggacaagat
     4561 actcaaattt gggattttca tcgtattaca aatatcccaa attatgatac ttttggcaaa
     4621 ctttggacaa ctttgcaagg tgaatatata gctactatag ctttaatcgc tgttattgcg
     4681 gtattatctg catttgcttt gcattatatg gttataggac ctaagcaatt ttcacacgat
     4741 ggaaagaaaa tttatgcttt tacattattt gaaagacttt ttcattttat cgcggcaatt
     4801 tcttgggtga ttttagtgcc aactggtttt gtgatgatgt ttggggcgac ttttggaggc
     4861 ggactttttg taagggtttg taaaaattta catgcttttg caacggtttt atttatcatc
     4921 tctataatcc ctatgttttt atggtggatt aaaagaatgc ttcctgcaag ttatgatatc
     4981 agatggatga tgatagtagg tggttattta agcaaagtaa aacgtcctgt acctgcaggt
     5041 aagtttaatt ttggtcaaaa atcttggtat tatatagctg tatttggtgg atttttgatg
     5101 ataattacag gtggatttat gtattttctt gattttaatt ccacggcaat tcaaggtctt
     5161 tttggtttaa ctcaaattga acttttaaga atttcagcta tagtgcataa tttcttgggt
     5221 atagtgtgtg cagtgttttt tggtgtgcat atttatatgg cagtatttgc aatcaaaggc
     5281 agtatccatt ctatgattag tggttataaa gaagaagaag aggtttatat tttacattct
     5341 tattggtata aagaattaag caataaaaag caaattgaac ctagtttttc ttatgatcct
     5401 aatgtaaaaa tttaatcttt aaccgctatg ttattgcata gcggtagttt taagcttttt
     5461 tgaaataaat agaacgaatt ttcttttata agttgaatct aaaatctatt tttccatata
     5521 taaatttgtt atttatgttt ttttgatata atattattta aagatattta aaggataagg
     5581 tatggatccg ttatttacaa ctcaaatttt aaaatataaa ggtgatgaat cttttacatg
     5641 caatgatact ttagtgcgtg aaattaagct tgaaattttt attaatgatg aaaaagtagg
     5701 tgctttaatg gcaactcctg tagatgaaca ggcattagca ataggatatt taatgagtga
     5761 aaatatcatt gcgaaagtaa gcgatattga gagcatagaa acaaaagatg atggtatgag
     5821 tgtgcatatt aaagcaaaga ttgataaaga aaatttagca aagcttaatg ctgaaggtgt
     5881 agttataagt ggttgcggta gagcacatac tgccaatatc gatccagaag ctattgaagc
     5941 gagtaaaatt agttctgatg caaaatttag caaagatgaa attttaaaac aaatgagtac
     6001 tttttatact caatgcgagc tttacgagaa aacaggctgt gtgcatacgg ctaagctttt
     6061 tgtagatgag aaaacttttt ttataggtga agatatagct caacataata ccatagataa
     6121 agctttagga aaagcacgtt tagctggggt tgatttaagt caatgttttt taatggttag
     6181 tggaaggcta agttctgaaa tggtagctaa agcagttatg cataaaattc cagtgcttgt
     6241 ttcacgcacg gctcctactt gtttaggggt tatgatagca agaaaatttg atttaacgct
     6301 ttgtggtttt gctagagaaa ataagatcaa tatttatagt ggagaattta gaattcatgg
     6361 ataaaaatca agaaaaagaa atcatctcat acatgagaga attgttaaat agcaatgaaa
     6421 aattagattg tggtacggct tttaaaattg caaagaaatt taatataaat atagaaaaaa
     6481 tcggacaatt agccgatgaa aatcacatga gaattgataa ttgcgagttg gggcaatttg
     6541 gacatttaga ttttgaaaaa gcaaagattg aagtgcttaa aaaaatagaa cctagtttag
     6601 atgaaaagcg tagaattttt tgtaaagatg caagagatat tgctaaagaa ggttgtggac
     6661 ttaaaagtat gcgttcagct ttaaaaactt ataaggttga tgtaaagtat tgtcaacttg
     6721 gttgttttaa agaaaaaaaa ggtaagcaat ttatagtaag aacaaaaact tggattgaaa
     6781 atgcggatgg agatttgctt tttggtcgag gaaaaacaga acttttagaa cttatcggac
     6841 aaacaggtag tttattacat gcttctaaac ttatggggat taattataaa aaagcttgga
     6901 tgcatttaca aaccttacaa aaaaattctc aagaaatttt agttagcaca agacaaggac
     6961 gctctaaaga atcaggaaca aaacttactc ctagagctat ggaattgatg gaaaattact
     7021 ctattttgca aaaagacata gaagaatacg ctaataaacg ctttaaagaa ttgtttttaa
     7081 aaggaaaaaa ataaatcttc tatcaaaaaa tactaataca taattttttt ataattaatt
     7141 aatattattt ttttaaaaat atgttaaaat tagaatctaa attttttatt ttttaggagt
     7201 tataagatgt ttaaatcttt aaatataggt ttaaaactta ttttttctgt ggcaactgtt
     7261 gttgttattg gacttgttat tttaatttca ttaatcacaa aacaagtaag tcaaaatatt
     7321 accaaaaata cagaagatat tcttgcttct atcacgaaag aatatgctac tcaaactcaa
     7381 ggaatttttg gggaaatgat cgctttaaat aaaagtattt caggtacttt aacagaaatg
     7441 tttagatcaa cctctaaaga agatttagat atagacaata taacaaatat tataaccaat
     7501 acttttgata atagtgctta ttctaatttt acttatttat atcttattga tccgccagaa
     7561 tactttaaag aagagagtaa attttttaat actcaaagtg gaaaatttgt tatgctttac
     7621 gctgatgaag aaaaggataa taaaggcgga ataaaagcaa tacaagctag tgatgaaata
     7681 gctaatctgc aagttgtgca agatatatta aaaaaagcaa aatatgggga aaataaagta
     7741 tatataggcc gtcctattaa gatgaattta gaaggtcaag attttgatgc tgtaaatgtt
     7801 gctatgccta tttttgatcg aaaaaatcaa gttgtaggtg tcataggcat gactttagat
     7861 ttttcagata ttgctactta tcttttagac cctaaaggtc aaaaatatga tggtgaatta
     7921 agagttcttt taaattcaga tggttttatg gcgatacatc caaataaaaa tctagtttta
     7981 aaaaatttaa aagatatcaa tcctaataaa ggtgcacaag aaacttataa ggccataagt
     8041 gaaggaaaaa atggagtttt taactatata gcttctgatg gtgatgattc ttatgctgcg
     8101 attaatagtt ttaaagtgca agatagttct tgggcagttt tggtaactgc tcctaaatat
     8161 tcggtattta aacccttaaa aaaattacaa ttaattattc ttggtgcatc ttttattttt
     8221 atttttgttg ttttaggagt ggtttattat tgcgtaagaa aaattgtcgc atctagattg
     8281 cctgtgattc ttagttcttt agaatcattt ttccgttttt taaatcatga aaaaattgaa
     8341 cctaaggcta ttgaaattcg tgctaatgat gagctaggag caatgggaag aatcataaat
     8401 gaaaatattg aaaagattca aatatcttta gaacaagatc aaaatgctgt agatgaatcg
     8461 gtgcaaactg ctagagaaat cgaaaagggt aatttaactg caagaattac taaaaatcct
     8521 ataaatcctc aattagtaga acttaaaaat gttcttaata ggatgcttga tgttttacaa
     8581 agtaaaattg gttctaatat gaatgaaatt aatagagttt ttgatagtta taaggctctt
     8641 gattttagta cagaagtatt taatgctaaa ggtgaagttg agattacaac taatatttta
     8701 ggcaaagaaa ttaaaaagat gcttttggct tcttcaaatt ttgctaaaga tttagccaat
     8761 cagtcagaag agttaaaaaa ttctatgcaa aaacttgctg atggctctaa tgcacaagcg
     8821 agttctttag aacaatcggc tgcagctgtg gaggagatta attcttctat gcaaaatgta
     8881 agtggaaaaa cagttgaggt tgcttcacaa gctgatgata taaaaaatat tgtcaatgtg
     8941 attaaagata tcgctgagca aacgaatctt cttgctttaa atgcagctat tgaagctgca
     9001 cgtgctggag aacatgggcg tggttttgca gttgttgcag atgaggtaag acagcttgcg
     9061 gaaagaacag gaaaatcctt atctgaaatc gaggcaaata ttaatatact tgttcaaagc
     9121 gtaaatgaag tagcagaatc tgtaaaagaa caaacagcag gaatcacaca gattaacgat
     9181 gctatagcac aacttgaaac tgtaactaag gaaaatgtcg aagttgcaaa tgtcaccaat
     9241 aatataacaa atgaagtcaa tcaaattgct gcggcaattc ttgaagatgt gaataaaaaa
     9301 agattttaaa aaagctcatt tttgagcttt taaatttttt ctatattatt taaaattttt
     9361 aaacacaaaa caagtaataa aataatatta tttttcaaag ctaatatcaa ggaaaaataa
     9421 tgaaaattga ttgtcgcaat ctatcttgtc ctcagcctat agttgaaaca aaaaacgctc
     9481 ttgaaaaact tcaagaaaat gaaattttag aa
//
LOCUS       DARATF010000064         9458 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.064, whole genome shotgun sequence.
ACCESSION   DARATF010000064 DARATF010000000
VERSION     DARATF010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9458
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.064"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..900
                     /locus_tag="SB502_001266"
     CDS             <1..900
                     /locus_tag="SB502_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HEG0434707.1"
                     /translation="KKNIVKASIYRGNKLISSNEKTFDKSENLLEYIKNLSKHFLFYH
                     TALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILFNNALVYTATEHVEYYSELFEEY
                     RGLDFLYSPFALLYYNIQKEKQPDDQILLYGFKQGHLLAIIVAKGNTILYGDFKIFEQ
                     ELGLELELPSEDNQEIENNNNDTEVTLDNFNEALNNKFDLLDQENNLETLNNNDNFNL
                     DELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGILLYSESDINISAIDFLESETF
                     LEIKTKQINTLDLMIELMQKELK"
     gene            897..1424
                     /locus_tag="SB502_001267"
     CDS             897..1424
                     /locus_tag="SB502_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434708.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDNEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            1414..1932
                     /locus_tag="SB502_001268"
     CDS             1414..1932
                     /locus_tag="SB502_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434709.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKLKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNV
                     KIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(1924..3216)
                     /gene="thiC"
                     /locus_tag="SB502_001269"
     CDS             complement(1924..3216)
                     /gene="thiC"
                     /locus_tag="SB502_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEG0434710.1"
                     /translation="MKTQMNYAKEGIFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQINAKDFLDVVYHHAKSGVDFMTI
                     HAGINSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDGAQISELIELSLLTQRAWDVGIQVMIEGPGHMAINEIEAN
                     MQLEKRLCKGAPFYVLGPLVIDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(3273..3377)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(3398..4159)
                     /locus_tag="SB502_001270"
     CDS             complement(3398..4159)
                     /locus_tag="SB502_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEG0434711.1"
                     /translation="MSLQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPKNITELTGITYEMVENAPSLAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENMHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTARIKQK"
     gene            complement(4156..4803)
                     /gene="rpe"
                     /locus_tag="SB502_001271"
     CDS             complement(4156..4803)
                     /gene="rpe"
                     /locus_tag="SB502_001271"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEG0434712.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFVDLFISLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLIHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            4943..5137
                     /locus_tag="SB502_001272"
     CDS             4943..5137
                     /locus_tag="SB502_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEG0434713.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            5322..5537
                     /locus_tag="SB502_001273"
     CDS             5322..5537
                     /locus_tag="SB502_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEG0434714.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            5547..6644
                     /locus_tag="SB502_001274"
     CDS             5547..6644
                     /locus_tag="SB502_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HEG0434715.1"
                     /translation="MFGSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIA
                     NSINASLGNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(6676..7272)
                     /locus_tag="SB502_001275"
     CDS             complement(6676..7272)
                     /locus_tag="SB502_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEG0434716.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGRLCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDDMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFVEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNMIRTPLLDFAYMWFLKEKWGKLKII"
     gene            complement(7355..9419)
                     /locus_tag="SB502_001276"
                     /pseudo
     CDS             complement(7355..9419)
                     /locus_tag="SB502_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862692.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT         3429 a         1659 c         1193 g         3177 t
ORIGIN      
        1 aaaaaaaata ttgtaaaagc ttctatttat agaggaaata aactaatcag tagcaatgaa
       61 aaaacttttg ataaaagcga aaatttacta gaatacataa aaaatttaag caagcatttc
      121 ttattttacc acactgcttt atttttagat gccaaagaac aaggattaat acctagtaca
      181 aatattcaag attgtgagca ctttaatata ggaaaaatca gcttacagca tattttgttt
      241 aataatgccc ttgtttatac ggctaccgaa catgtggaat attatagcga gctttttgaa
      301 gaatatagag gtttagattt tttatattcc ccttttgctc ttctttacta caatatacaa
      361 aaagaaaaac agcctgatga tcaaatttta ctttatggat ttaagcaagg acatcttttg
      421 gcaattattg ttgctaaagg caatactatt ttatacggtg attttaaaat atttgagcaa
      481 gaattaggtt tagagcttga acttccatca gaagataatc aagaaattga aaacaacaac
      541 aatgatactg aagttaccct agataacttc aatgaagcct taaataataa atttgatcta
      601 cttgatcaag aaaataatct tgaaactttg aataataatg ataattttaa tcttgatgaa
      661 ttaaatcaat ttagcaatga tatggaacta tgccgttata ttattacgag cattgaaaaa
      721 ttttataatg atgataaata tgctggggta tttatcaatg gtattttatt atatagtgaa
      781 tcagatatta acataagtgc tattgatttt ttagaaagtg aaactttttt agagataaaa
      841 acgaaacaaa tcaacacctt agatcttatg atagaattga tgcaaaagga gcttaaatga
      901 cttatagctt catacagcca agaaaaaaac ctattttcac actctttgat aaaatttggc
      961 taggactttt tggttttagt atattattta tcttgctagt atattttaca tatacaataa
     1021 aaattgcatt aatcaatagc tctatcgata atgaaaaaca acaagttata gtgcttcaaa
     1081 atcaaactaa gcaaaatgaa atgctttatg aaattttatt tgatcaaagc caaatagcga
     1141 aaaattttaa cactcaaaat caaattgtta aagaaagctt aagaaatcta tttgatatta
     1201 ttgtaaaaac tgataatatt actcttgaaa gtgttgaaca agacgaatat tccttaaaac
     1261 ttatcggagt cactcctaca agagaaatgt ttactctact tttagaaacc cctttaaaaa
     1321 gcatctttga tcaaagctat acaacctatt atcgcttaga taatgggtgg tatcgttttg
     1381 ttagtattag taaacaaatt ccaggagttg cagatgaaag ataaaagtct agaagaaatt
     1441 gatttattaa agcttatcat ttgcgcgtta agttttataa gcgtttgcac agccttgatc
     1501 ttatttttac ttttaccgac attaaaaaat tataaacaag caaatcttag agaaaactca
     1561 caacttgcta tcttaaaagc cgctaaatta aaatttgact ttagtgaaga taaaatatca
     1621 actctaagaa gcgaaaacaa caaaagttta gagcaatttg agcaaaattt taatatagga
     1681 aattttgata tttttttaca aaaatatttt caaaatgtaa aaattcaaga aactaagccc
     1741 gaaaaacaag aaaaatatct aaaaaaccgc ttagccatta aagcgacaat gaacaatcct
     1801 agaaggcttt atgattttat tgatgctcta aaaaactata ataacttaat caagcttgat
     1861 tatccactta atcttaaagc aggagagcaa ggtatctcta tagatcttac tctcaaagtt
     1921 tattcaagct aaactcacat cttcgccttt taaaatttga ttcatagtat tcattgcaca
     1981 catttttcca cacatagaac atgagtttaa atcatcagga cgacgctcat taaacatttt
     2041 tttggccttt tctccatcaa tagcaagttt aaacattttc tcccaatcta tctcttgcct
     2101 agccttactc atctcatcat ctcttgctct ttcttttgga agtttagcta tatctcctgc
     2161 atgagctgca attttagtcg caactatacc ctctctaaca tcttctaaat ttggaagtct
     2221 taagtgttca gcaggtgtta cataacacag catatcagca ccgctagctg cagccacagc
     2281 tcctccaata gcaccactaa tatgatcata ccctgcgcca atatctatta ccaaaggtcc
     2341 taagacataa aaaggcgctc ctttacataa acgcttttct aattgcatat ttgcctctat
     2401 ttcattaata gccatatgcc ctggaccttc tatcattact tgaatcccaa catcccaagc
     2461 cctttgagta aggagtgata attctataag ttctgaaatt tgtgccccat cacttgcatc
     2521 gtgagtagag ccaggacgca aagcatcgcc caaagataaa gttacatcgt attttaaaca
     2581 aatgtcaagc aaatcatcat aatactcaaa aaaaggattt tcagcatctt tcatcatcat
     2641 ccaagcataa agtacagagc ctcctcttga aactatattt gtaagtcttt tactttgttt
     2701 aaaaatatgc gctgcgcgag aattaatacc tgcatgaatt gtcataaaat caaccccact
     2761 tttagcatga tgatatacaa catctaaaaa gtctttggca ttaatttgct ttaaatcttt
     2821 ttctaaaaat cctaccgcat catatacagg aactgttcct atcatagctt ttgaaacatt
     2881 aacaagctcg tctctaaaac gacttgtttt gccataattg cttaagtcca taatcgcttc
     2941 tatatcaaat ttatgagcaa gctctacttt tttcatttcc tcgctataat caacacaatc
     3001 atttgaaact cctaaattta cattaacctt agtacgcagt ccaaaaccta taccatttgg
     3061 atcaagactt ttatgattaa tatttgcagg gataataatt ttaccgcaag caatattttc
     3121 aagcaaaaaa tctttactta aattttcttt ttgtgcaaca atctgcattt ctttagtaaa
     3181 aataccttct ttcgcataat tcatttgagt tttcataaat ttatccttta aaaaatttgg
     3241 ataaatgaag ggtgagtata aatttttaaa gtattgaaat ttataaatct tcccgacgct
     3301 ggcattatcc agatccggtt cggtctaagc ttttagctta ctctcagcct gttacacaag
     3361 ctcccgtcat ttatgtttta ttatacactt taaatattta tttttgcttt atacgtgcag
     3421 tttttgtaaa atttataagt tcttctgtag tttttatatg ataaggaagt tttccaaggc
     3481 aatatttaaa aatttcagca gctgccaaag catcatctaa ggctctatga tgcatatttt
     3541 ccacgccaag aaattctttc aaaacctcta gtttatattt tggactttct atacaacatt
     3601 gtgcaaattc tatagtgcaa atacgacgat taagcaaaat gccaaaacca cactcattta
     3661 aagccttaga aataaaacta taatcaaaac gcacattatg cgctacaaaa atactgtctt
     3721 ttaaaaaaag cctaaaatca cttaaaacct ttgctaaact tggagcattt tccaccatct
     3781 cataagtaat acccgtaagt tcagttatat tttttggaat ttcttttact ttaacaaaac
     3841 tttgaaagcg tccaatttct ttagaatttt gaatttttac cgctccaatt tctaaaattt
     3901 cccccttgct caccccacca gtactttcta tatccactat gcaaaaaatt tcatctttaa
     3961 tttttgttgt gcgtgtttta agagtaaaaa tattatcttt atttaaagtt aaacctaacc
     4021 ccaaaagctc aaaagtttct aaatctaaat caaaattttt taattcttca actttggcaa
     4081 actcttgcat cacccaatca taaggcttgc tttgcttatt taatatagaa ataatctgat
     4141 caatttgctg taaactcaaa attcaagctt taaagatgaa attgcagttt tataatcatt
     4201 ggaagaaaaa atataacttc cagccaccaa aatatcagct ccagattctt ctaaatcact
     4261 agcatttaaa ccattaacac caccatcaac ctctataaaa actttagcat tttttttatc
     4321 aatcatttgg cgcaattctt tgattttttc atgtatcaaa ggtaaaaatt tttgcccacc
     4381 aaatccagga ttaacactca ttaaaagcac catatctaca aattctagca tgtgtttaat
     4441 agaatcaata ggagtatgtg gatttaaaac aatagcagga tggattcctt gacttcttat
     4501 atattcacaa agccttatag gatgaacttc gctttccata tgaaaagaga taaatttcgg
     4561 ttttaaagag ataaaaagat ctacaaattt acttacatct ttaaccatta aatgcacatc
     4621 taatggcaac ttactaatag ttgaaatctt ttcgatcacg caaggtccga aagtcaaatt
     4681 tggaacaaag tgtccatcca ttacatcaat gtgtaaaaga tccgcacctg cagcttcaat
     4741 agctttaact tcttcttcta atttcaaaaa atttgcagac aataaacttg gagctacata
     4801 catgatcaaa accttaaact atatataaat gtgataaata atattttatc gacttatata
     4861 ttaaaaaaac tataaattat ggaatatttt aagcttaatt ttgataaaat ctccatttaa
     4921 aaattttcat aaggacaaaa aaatggcaag agtatgtcaa atcacaggca agggtccaat
     4981 ggtgggtaat aatgtcagcc atgctaacaa taaaacaaaa agacgctttt tacctaatct
     5041 cagaacagtt cgtgtaactt tagaagatgg caccacgaga aaaatgagaa ttgcagcttc
     5101 tactctaaga actctaaaaa aacaaaattc taaataattt tgaggattta ttcctcaatt
     5161 ttaaaatttc caatttaaaa ataaacttta acaaatcact tatataacac acatttaaaa
     5221 attattatta attttattat tttttaagct aaaaatatct tttaatagtg taaaatacct
     5281 tgttaaatga attttaaatt tcactaatac aaggagagtt tatgctacat gaatatagag
     5341 aattaatgtc agagctaaaa ggtaaagatg ctcattttga taaactattt gatcgtcata
     5401 atgaacttga tgacatgatt aaagatgcag aagaaggtag aacttctctt agcagcatgg
     5461 aaatttcaac tttaaaaaaa gaaaagcttc atgtaaaaga tgaacttagc caatatctag
     5521 caaattataa aaaataaggc aaaacaatgt ttggaagtaa aataaaccat tctgatcttc
     5581 aaaaacttga agaagaaaat aaaaatctta cacataaaat tgaaaaattt caatcggaaa
     5641 atttagaatt aaaaaataaa attacatcat tagaacaagc ggctttagag tctaaactta
     5701 aaacagatct tttaaatgtt ttattaactg gggttttaaa aaatattact attattcaag
     5761 gcgatatgtt agaaaatgta aataaggcag aagttatctc tagctattct aaaacttctc
     5821 ttgctgaaat ggatgaactt aaccatattg ctaattctat caatgcctct ttgggaaata
     5881 ttacagaatc agccaataaa acaagagatg ttgcaggaac attgcataga agtgtagatg
     5941 aaattactaa tgtaattaat ctaattaaag atgtttccga tcaaaccaat cttttagctc
     6001 ttaacgctgc catagaagct gcacgcgcag gtgaacatgg gcgtggtttt gctgttgttg
     6061 ccgatgaagt aagaaaacta gctgaaaaaa cacaaaaagc aaccacagaa gttgaaatga
     6121 atatcaacct tctaaagcaa aatgcaaatg aaatgtatac tcaaagtgag caagttgaaa
     6181 aaatttctat agattctaat gctcatatta tgagtttttc cgaaaaattt actcacttag
     6241 taaatgaagc gcattctact aattcaaatg cagttggtat cgcttcagaa gctttcgtat
     6301 ctttagcaaa actagatcat atagctttta aattaaatgg ttataaagaa attttttcca
     6361 aatcaggaaa gcaattagcc gatcatacat cttgtcgctt aggaaaatgg cttgctagca
     6421 caggaaaaga aagatttggg caaaataaaa gcttcttaaa aattaacgag ccacatgaaa
     6481 aagttcatga aaatatgaat aatgctataa caatagcaaa tacagaagat attagcaaag
     6541 atattactca acacagcata attaataaat gcgaagttgc tgaaaatgca tcgcttgatc
     6601 ttttcaatgt atttaaagaa atgcttgatg agtcagatca ttaaaatcct aggttgaacc
     6661 tttttaaggt ttaacctaaa taatctttaa ttttccccac ttttccttta aaaaccacat
     6721 ataagcaaaa tcaagcaaag gcgttcttat catattttta catttttttt caaaatcctg
     6781 caccttaaca taaacagctt caatctcttc atcatcaact ccacctccag aagaaatttt
     6841 atctttttca tcaacttcta cgaaataaaa gctttgcttg cttacacctg aaccaaaccc
     6901 tgtataaaaa tctcctattt tttctaaatt tttaggagca tatcctagtt cttctataca
     6961 ttcttctttt gctatttcct ctaaagataa ttttttatcc acaagcccag aacaaagctc
     7021 tatagtatag cccatatcat catcttttac ataatcttta tcatgcattt gatgatacca
     7081 aagtggtata cgaaattggc gtacaaaaat aaaactttct aattctttat gatacaaaag
     7141 cactgaaaca ctatctttag attctataaa atcccaagtg caaagcctac cattactttc
     7201 ataagcaaat ctcttaggct taatataatt tgatttttca aaagaaagtt cttttaaatt
     7261 tttaaacgcc ataataaaac cttttattta tttttcacat tgtactttat ttttgctttt
     7321 ttgaaaatat aaaggtgatt aaagccttaa aaaattaaaa atcatattta taacttaacc
     7381 aaaaacttct tccttctata taatcttgat agcgatttgc atatccagca ggattagccc
     7441 catcccatct tgtaacttgc ggatcaaaga aatttttatc aaaaagattt tgcactgcaa
     7501 aacttaagct agattgctta ttgattttat aatttatccc taaatctact atataaaaag
     7561 gcttatattt ttgccatggc agactaccat taccgccacc ttttgcttta gctatagtat
     7621 caagtcttgc tcgtgttttt atataggaac taaatttacc tcgctcatag tttaatttta
     7681 acattgctat atgtcttggt aaattttcta ttctatcacc accaaaccaa tttttttgac
     7741 catctttgta gcgattatcc ataaaagtat aacttgaatt taggctaaag ccattgtaag
     7801 ttttggtatt aaatgcaaat tctatacctt tagtctgcgt ttttccaaga ttaataggac
     7861 gcttacaaac aatgccattg ctacaattaa tatcattttg catacctgtt aaatcttcac
     7921 tactgatttg atttgtaaaa tcagtaataa atcctgtaat agaataatgt gcaaaatcaa
     7981 ataccataaa atcaacaccc aattcataat ttatactttc ttctggtttt aagtcagggt
     8041 ttccaaaata agcattatta ttggcataat tataatatcc atttgtcaac tgcttggcag
     8101 caggagtttt atagcctttt gaaacacctc ctttcaaggc tatattatca tttaagtgat
     8161 aaaccaaata aaccctaggc gtaaattcag aatcaaacaa atcgctataa atataacgca
     8221 aacctgtagt aaaaatcaaa tcatcggtta taaaatactc attttcccca taaagcgcaa
     8281 ccgtggtttg atcaagattt ttacctctta tttgactacc tgcgcttgct tgatcatttt
     8341 ttaatatctc ataatcaatc cttgcaccaa aggtatttac taaattaccg tattgaccta
     8401 aattccaagg taaaacaacc ttaccttctc ctacccaaat ttggctatgc agctccttat
     8461 ccttagtgct accatattgt aaatatgagt tagttgaacc aaaatcatag ttaccatcat
     8521 gattcaaaac aatattatcc ttaaaaagtt gtctttcact tttaatagcc ctactacttg
     8581 tagaattcac tgaaatttca ttaatatatc gttctatatc aaaatatata ttatttttat
     8641 catctactgt ccaattaagc ctagaaccaa aacccaagct agtaaaagca ccttgggcta
     8701 tgactagcaa tttgataatt atcaggtctt tgattgttat tattccaaac cggtgtaggc
     8761 cattttaaat cagaagctgc cttatcataa tacttcaacc ttgcagaaat tgataatgta
     8821 tcttcaatca aaggagttgc tacataagca ttaaatcccc cagcattacc atagtgatta
     8881 gagtgctgtt gtaaaagagt attaaattct atatttgctt cgattttatc aggatttttc
     8941 ttagtgataa tatttatcac accgcctaca gcatcactgc cataaagtgt agaagctgga
     9001 ccacgtataa cctcaatacg ctctatcata gacaaaggtg gcagatatcc tgactcactg
     9061 ccactaaaac cattatcata aaacccattt gcaacacttt gacgttttcc atcaattaaa
     9121 actagagtat aagaactacc aaaacctcgt atgctaaaat cataagtgcc tgttttattc
     9181 atagtcacat ctacacctgg aatatctcct atagcctctc ctatatcctt aattggcttt
     9241 ttttcaagct cttcttttgt aatgatagaa atactagcag gcgcatcaac caaatcttgt
     9301 tcaaaaccac tagcactaac cacaacatca ttaagttgat atttttcttc tgcttttaac
     9361 aaagctccag ataaaattaa aaaacacagt aaactttttt taaattttat atttttgatt
     9421 tgagtcaaat taattccttt aaaaataatt attttgat
//
LOCUS       DARATF010000065         9446 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.065, whole genome shotgun sequence.
ACCESSION   DARATF010000065 DARATF010000000
VERSION     DARATF010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9446
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.065"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(100..981)
                     /locus_tag="SB502_001277"
     CDS             complement(100..981)
                     /locus_tag="SB502_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEG0434717.1"
                     /translation="MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFD
                     GILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISE
                     HFLAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLE
                     INFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLN
                     IFLELDRMAAIKELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRK
                     NYNFNRALEKFEKIFKS"
     gene            1094..2191
                     /locus_tag="SB502_001278"
     CDS             1094..2191
                     /locus_tag="SB502_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEG0434718.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFIIALFVGTKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLVFGGYFLTLAFKGILW"
     gene            2286..2858
                     /locus_tag="SB502_001279"
     CDS             2286..2858
                     /locus_tag="SB502_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434719.1"
                     /translation="MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTK
                     GEFKNVEYKFSKNIKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDT
                     DIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK
                     ALKALSDVAAGHGGISWPLVDISFNADLAE"
     gene            complement(2874..3440)
                     /gene="rsmG"
                     /locus_tag="SB502_001280"
     CDS             complement(2874..3440)
                     /gene="rsmG"
                     /locus_tag="SB502_001280"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEG0434720.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNLADIGSGAGFPAVFLAFLLQSNFHLFEPNPKKAAFLRT
                     LKIECELPNLHIYKEKVQEYKNTFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRRYCILK"
     gene            complement(3441..4001)
                     /gene="ribA"
                     /locus_tag="SB502_001281"
     CDS             complement(3441..4001)
                     /gene="ribA"
                     /locus_tag="SB502_001281"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEG0434721.1"
                     /translation="MKIKISEIANLPSKWGNFQIQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLDSIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMRHLK"
     gene            4059..5042
                     /gene="hemB"
                     /locus_tag="SB502_001282"
     CDS             4059..5042
                     /gene="hemB"
                     /locus_tag="SB502_001282"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEG0434722.1"
                     /translation="MFKRFRRLRLNENLRAMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDEGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKTKSVDNDVTLEISAKQALVHARAGV
                     DMIAPSGMMDGIITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPAFAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            5039..5959
                     /gene="argF"
                     /locus_tag="SB502_001283"
     CDS             5039..5959
                     /gene="argF"
                     /locus_tag="SB502_001283"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEG0434723.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVVGAMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSELYHPTQVLGDLLTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLIAAAILGFEFSIAIPKNYKISPEIWEFAMKQALISGAKISLSHDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSIANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYVAKALLCFLDNQRGRE"
     gene            5956..6447
                     /locus_tag="SB502_001284"
     CDS             5956..6447
                     /locus_tag="SB502_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HEG0434724.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSESENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            6434..7789
                     /gene="hemN"
                     /locus_tag="SB502_001285"
     CDS             6434..7789
                     /gene="hemN"
                     /locus_tag="SB502_001285"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEG0434725.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTNFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQM
                     HFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGIGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQ
                     EYFKEDLKALEEYKDFINFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            7791..9056
                     /locus_tag="SB502_001286"
     CDS             7791..9056
                     /locus_tag="SB502_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEG0434726.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKITKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVGMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFASPLELIAKAL"
     gene            9053..>9446
                     /locus_tag="SB502_001287"
     CDS             9053..>9446
                     /locus_tag="SB502_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434727.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDSEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSMQFKNLKFFSRIFKNENFL"
BASE COUNT         3249 a         1141 c         1699 g         3357 t
ORIGIN      
        1 tcttgagttt tggcgttcat tgattatcct tgaaatttat ataagctttg gattttatct
       61 aaaaattgct taactttcta tataaatcgg ttattatgtt tatgatttga atattttttc
      121 aaatttttct aaagctctgt taaaattata attttttctt tttaaggtat aaaatttacg
      181 ctttaggtcg atatttttta atttaatttc ataaagtgtt gaatttttta attctttttc
      241 tatgcttttt ttggaaaaaa tagagattgc ttttttttgt aaaacaagtt ctttaatcgc
      301 agccattcta tcaagttcaa gaaaaatatt aagttttttt gagcttgcac caatttcgtt
      361 taaaaattta tcccttaagc ctgagcctac ttctcttaaa atccactttt gttccaaaag
      421 ttcatcgata taaaattctt tttcattgag ttttttatca cttgtagcta ctataagttc
      481 atcatcttgc caaaaattta tttctaaatt ttcatactcc actaaagctg gatcaagttc
      541 tgcttcaatg attgcaaatt ctatatttcc gttttttagt aaatttaaac attcttttga
      601 attctgcgtt tgagagcgaa tttctatgtt tttaaattct gccttaaaat caaataaaat
      661 aggagctaaa aaatgttcag aaatgctttg agttgaggct atttttattt cccctaagag
      721 catactttcg tcgtttaatt tttctaagct ttggtagtag gcttgtataa tttttaacca
      781 attttttcct agttctaaag cttttggtgt aggtaagagt ttttttccaa gtctttcaaa
      841 taaaatgcca tcaaatttat tttctaaatt tttaattact attgaaacat taggttgagt
      901 tatggaaaaa ttgttggctg tatgagttgg actttgagtg tttaaaagat ctaaaaatat
      961 ttccatatct ttgattttca tgagtgattc ctttatttaa taaaaaaaaa ttattataaa
     1021 aattaaaata atatatttct ataattttaa taaaaaaaat ataataacac aaaatttaca
     1081 aaaaggaaaa taaatgaaaa caagtttttt agcacatagc gtggctatag tgcgatcaaa
     1141 ttttaagggt ttgcttttta ctgcttgtat agtgattttt gctatgtatc tttctagtgt
     1201 tcaaagtatc aaagatacca ctcatttagc agcgactgct tttgctatta tcataggagt
     1261 gttgctttct ccttggtttt ttaaatacca acatcatttt caagccggag tgcattttag
     1321 tgcgaaaaaa cttttaagac ttggcattgt tttatatggt tttaatatca ctttaactga
     1381 gcttttaagc gtaggattga aaggattttt gctttctgct atagtgatat tttttgtttt
     1441 tattattgct ttatttgtgg gaacgaaaat ttttaaactc gataaagaaa cttctatgct
     1501 tgttggagct ggaagtgcga tttgcggtgc ggcagcggtt ttagcactag agtcaagttt
     1561 gaaaagtgat ccttttaagg gaattttagc tgtaggtacg gtggtgattt ttggacttgt
     1621 atttatgttc ttatatccca tagctttttc tttaaatctt tttccttttt ttgatcaaaa
     1681 tgctatgggt gtttttatgg gagctacgtt gcatgaggtg gcaaatgtcg caggtgctgc
     1741 tgaaatggca aaggatatgg caggatttga gcaaggtgct tctaatgttg cagtgattat
     1801 aaaaatgatg agagtgattt tacttgtgcc ttttttgctt atagtgactt attttttcgc
     1861 taaaaatcaa cattcaagca gtggaaaaac tgcaaaaagt atcactatac cttattttgc
     1921 ttttgcattt ttaggcatga tagttttaaa tacttattta gcaagcaaag aaagtatttt
     1981 aggtattgct acgagtgata tcatctcttt aggtaaaaca ctttgtactt tatgtatcgt
     2041 ttttgctatg gcagctttag gcttgcaaat tgactttaaa aaatttttaa aaagtggctc
     2101 tagggtattt ggcttggctt ttgttttagg gcttgttttg gtttttggag gatatttttt
     2161 aaccttagct tttaaaggta tactttggta ataaaaatta ttttttattt tagaaaattt
     2221 tattttatta atcaactaag aatataattt aattcattaa ttaaatttat taaaaaggaa
     2281 taaagatgaa aaaaattctt gtaagtgttt taagttcttg cttgttagct tcggctttaa
     2341 gtgctgtatc ttttaaagaa gatagtttaa aggtttcttt tgaaggatat aaaactaaag
     2401 atatgatagg aacaaaaggt gaatttaaaa atgtagaata taaattttct aaaaatataa
     2461 aggatttggc aagttatctt aaaggcgcta aagctactat aaagccaagc aatgctttta
     2521 tgggtgaagg caatgatatt ataaccaata atatcacaaa agtatttttc cctgctttat
     2581 tgggagatac ggatattaaa gttgtttttc aagatgtgat tgcgggtgaa aataaaggcg
     2641 ttatttcagc aaaaattact atggataaaa aaagtactat tgtaccttta acttatacca
     2701 tcaaagataa taaatttgaa gctaaaggac aacttgattt gcatactttt aaaaatggtt
     2761 ctaaagcatt aaaagcatta agcgatgttg ctgcaggaca tggtggaatt tcttggcctt
     2821 tagtggatat cagttttaat gctgatttag cagaataaaa agtagcctta gggctacttt
     2881 aaaatacaat atcttcttaa attattttca aaaatttcat aatcttttat attttcaagt
     2941 tcttgataaa tttcactacc tttccataaa ataaaaactg tattttcatc ttttagattt
     3001 ttgcaaattt caagcaaagg cttgacatcc attaaggctc ttgaagtgat gatatcagct
     3061 ttaaaggtat tcttgtattc ttgaactttt tctttgtaaa tatgtaaatt tggaagttca
     3121 cattctattt ttaatgtccg caaaaaggca gcttttttgg gattgggttc gaaaagatga
     3181 aaattgcttt gcagtaaaaa agctaaaaat acagctggaa atcctgcgcc acttcctata
     3241 tcggcaagat tttttgcttt agaaaaatca taaaaatcta aaattttaat actatcaaag
     3301 atattttcat ctatattttt taaatgagta agattgtgaa tgcggttaaa tttagataat
     3361 aattctttat aaatttttac cttttcttca aagtttttta aatcgtagtt ttgcaaaaaa
     3421 tcataatctt taaaaatcat ttatttaaga tgtctcattt gagtttgttt tatgtttaaa
     3481 tactctacat taaaacgatt aggttctatt aaaatcggta tgcgtgtgat gattttttct
     3541 ttgatagaat ctagcttttc agggttattt gtgagtaaat taaccttaga aatttcatag
     3601 tgtttgagta taaattctac aatttcataa gttctctcat cggctttaaa gccaagctga
     3661 tgatttgctt taatcgtatc aaaaccttta tcttgtaaag cataagcatt aaccttgtta
     3721 aaaagcccta taccccttcc ttcttgccta agataaatca ccattccgcc attcttttct
     3781 atatatttta gtgaaaattc aagctgttcc ccacaatcac actttaaact tcctaaagca
     3841 tctcctgtta agcactctga atgaattctt agattgagtg tgtcttttgg agtattttta
     3901 aatatacata aatgttcttt atcattttct ttgaaacttt gtatttggaa atttccccat
     3961 ttgctaggta aattcgcaat ttctgaaatt tttattttca tttactactc tctataatca
     4021 aatttatgtt aagattttag caaaaaaagg acaaaaaaat gtttaaaaga tttagaagat
     4081 taaggcttaa tgaaaactta agagccatgg taagagaaaa ttctttaagt gtaaatgatt
     4141 tgatttatcc gctttttgtg gttaatggaa cggggataaa aaaagaaatt tcttctatgc
     4201 ctgatgtgtt tcaaatgagt ttagatgaaa ttttaaaaga gtgtcaaaat gtagttaatt
     4261 taggcattaa agccattata ctttttggcg ttttggaaaa tgagaaaaaa gacagctgtg
     4321 gaagcgatgc tttagatgat gaagggcttg ttgcaagaag tataagagag attaagaaaa
     4381 attttccaga tctttttata atcagtgatc tttgtttttg tgaatacaca gatcacgggc
     4441 attgtgggat tatcgatcca aaaacaaaaa gtgtggataa tgatgtcact ttagaaattt
     4501 cagccaaaca agccttagtt cacgcaagag caggggtaga tatgatagca cctagtggaa
     4561 tgatggatgg tattatcact actttgcgca aagctttaga taaagaaggt tttgaaaatt
     4621 tgcctataat ggcgtattct actaaatttg cttcaagtta ttatgggcca tttcgagatg
     4681 tagcagaatc agctccaagt tatggagata gaaaaagcta tcaaatggat tttgctaatg
     4741 gtaaagaagc tttagaagaa agcttggaag atgaagcaca aggagctgat attttgatgg
     4801 taaaacccgc ttttgcttat cttgatgtgg ttaaagaaat atcccttcat tctaacttgc
     4861 ctttgtgtgt ttataatgta agcggagagt atgctatgtt aaaggcagct aaaaatgcag
     4921 gagtgattga ttatgaaaaa gttttgtatg aaactatgat agcttttaaa agagcagggg
     4981 caaagcttat catcacttat catgccaaag aattagctaa aatgttaaaa ggagaaaaat
     5041 gaaacatttt ttaactttaa gagatttttc taaggaggaa attttaagcc ttgtaaatca
     5101 tgctagcgag ttaaaaaaag agcctaaaaa acttttacaa gataaaactt tagcaatgat
     5161 ttttgaaaaa aactctacaa gaacaagaat ggcctttgaa ttagccataa cagagcttgg
     5221 cggaaaggct ttatttttaa gtagcaatga tttacaactt agtcgtggcg agcctgtaaa
     5281 ggatacagct agggtggtag gggcgatggt tgattttgtg atgatgagag tcaataaaca
     5341 tgaaacttta ctcgaatttg caagatattc taaagcccct gtgatcaatg ctttaagcga
     5401 gctttatcac cctactcagg ttttaggaga tttgcttact atcaaagaat ggaataagat
     5461 gcaaaatggt atagcaaaag ttgcttttat cggagatagt aacaatatgt gcaattcttg
     5521 gcttattgcg gctgcgattt tgggctttga atttagtata gctataccaa aaaactataa
     5581 aattagccct gaaatttggg aatttgctat gaaacaggct ttgatttcag gagctaaaat
     5641 ttccttaagt catgataaat ttgaagcctt aaaggataaa gatgtagtca ttaccgatac
     5701 ttgggtttct atgggtgaag agaatgaaaa agaacgcaag attaaggaat ttgaaggatt
     5761 tatgatcgat gaaaaggcta tgagcattgc gaataaagac gcgatattgc ttcattgttt
     5821 gcctgcttat agaggttatg aagtgagtga agaaattttt gaaaaacatg cagatgtgat
     5881 ttttgaagaa gcaagaaatc gcctttatgt ggcaaaagcc ttgctttgct ttttggataa
     5941 tcagagagga agagaatgaa agagctagaa aagtatagca cttgcttaaa gcgcattgat
     6001 gaatttagtc aaaatctagg aataaagaaa aaagatagaa cgatttttaa aatgaagcaa
     6061 agcgagagtg aaaacgaaaa atgtttagtt cttgaaaatg gaagttttga ttctcctgag
     6121 ccttggtttg tgatagatga aaacgatgaa attcacactt tgctttcttt acaaagtctt
     6181 aagaatatac ttgaaagttt aaaacaaagt caaaaagaga attttgaatt gcgtttagaa
     6241 aaggcgattt atcaacaaat tcctgtagat tttaacgatg tttggacggt tgccatggat
     6301 gagatcaagc aaaaggcaca aaatggtact atggaagtta gtattgatct tgaaaaatta
     6361 atttctaaaa tcaaacaaga gcatccaaat ttatttgtag atatgcaagc gatgatagaa
     6421 agggtaaacc aaaatgagag attataaagc ttttgtaaaa tactctaaag caggaccacg
     6481 ctatacttct tatcctacag cagtagagtt taatacaaat ttcaaatacg aagaatatat
     6541 agaaatttta aaaaaacaag atagatcttt atcgctttat tttcatttac cattttgtag
     6601 gagtgcttgt tatttttgtg gttgcaatgt catctatact gcaaaagaag agagtaaaga
     6661 aaggtattta acttatattt ttaaagagct tgatatttta agtaccattt tagatactaa
     6721 aagagaagtg gtgcaaatgc actttggtgg cggaactcca acttttttta gcgctaaaca
     6781 acttcaaagt ttgattttaa aaatcagatc tgtttttgga aatttttcta aagatgcaga
     6841 gattagctgt gagatcgatc cgcgtttttt aaatgaggaa caagccatag ttttaacgca
     6901 aaatggcttt aatcgtatca gctttggagt gcaggatttt gatgaaaaag ttcaaaaaga
     6961 aattcatcgc atccagtctt ttgaattaac acaaaatgct ttaaatcttg taagaaataa
     7021 aggcataaag tctgtaaata tggatttaat ttatggtttg ccttatcaaa atttacaaag
     7081 ctttacacaa actttagaaa aagttatgct tttaaaccct gatcgtttgg cgatttttaa
     7141 ttacgctcat gtgccttggc ttaagaaaaa tatgagaaaa tttgatgaaa ataccttgcc
     7201 aagtcctgat gttaagcttg aaattttaga attttgtgag aaatttttaa gcaaaaatgg
     7261 ttataaaatg ataggaatgg atcattttgc aaaagaaaat gatgagcttt ttaaagcttt
     7321 agaaaatgga actttgcata gaaatttcca aggttatact accaaaggcg gtgctgattt
     7381 agtcggtatt gggcttacaa gtataggcga agggcaaaga cattatgcgc aaaattttaa
     7441 agatatgtca agttatgaag ctgcattaga tagaggagtt ttgccttttg aaagaggcgt
     7501 agctttaagc gatgatgatg agcttagaaa agcagtgatt atggagttaa tggcaaattt
     7561 taagcttgat atcaagtcaa tagaaaaaga attttgcatt gattttcagg agtattttaa
     7621 agaggattta aaagctttag aagaatacaa agattttatt aattttgatg aaaattttat
     7681 caaagtcaat gaaacaggcg ttttgcttat aagaaatatt gccatgtgtt ttgatgctta
     7741 tatgaaaaac attagtgaag ataaaaaagt attctcaaaa acggtgtaag atgaaattta
     7801 gtcaaataag tgatgcttgt gttaaatgtg gcaaatgtat acctgtttgt actatacatg
     7861 aagaaaatcg cgatgaaatt actagtccaa gaggattttt agatctttta gctgcttata
     7921 aagagggaag tttagaactt gataaagaag ctaagaaagt ttttgaatct tgttttttat
     7981 gcaccaattg tgttgaagta tgtccaagta aattaagagt agataatgcc atagaagaag
     8041 ttcgttatga tatagctaaa aaatttggta tagcttggta taaaaaactt atttttttct
     8101 ttttaagaag acgcaaaatt ttagatttgg tagctaagct tggctatgtg tttcaaagtt
     8161 gtgcgtttaa aattcaaaat gagaatgaaa atacaggtat gaaggcaaga ttttccatgc
     8221 cttttgttaa aaagggaaga ttacttacaa gttttaataa aaaaagtttc ttaaattcta
     8281 atccaaaatt tatcaataat gatggagaaa aaacaatagg tttttttgta ggttgtttgg
     8341 cgaattattt ttacatagat acggctaatg cagtgcttaa aatcactaag gaattaaaaa
     8401 tcaatgtgga tttgatgaaa gaacaagtgt gttgtggagc accgcaattt tttacgggtg
     8461 attttaaaag tgttgaagtt ttggctaaaa aaaatattga gtattttgaa aaaaaattag
     8521 aaaaattaga tgctattata gttcctgagg ccacttgttc ggctatgtta aagatagatt
     8581 atgaacattt ttttataatg caaaatgatt tagactgggc aaaacgcgca aaatgtgtgt
     8641 catctaagat atatatggct agcgagtatt tttataaatt tacttctttg gaagaaattt
     8701 taaaaacaaa aaataaattt aattatagca ttacttatca cgatccttgc catgcaagaa
     8761 aaatgcaagg ggtttttaaa gagccaagag aacttttaaa aacaaattat cattttgtag
     8821 aaatgagtaa ttctaatact tgttgcggtt ttggcggggt gggtatgcaa acggattatt
     8881 atgatagagc cttaagtgta gggcttaaaa aagcacaaat gatcgatgaa agtaaggcta
     8941 gtgtggtaag tgccgagtgt tcagcttgca gaatgcaaat ttcaaatgca ttagaacaaa
     9001 attcaagcaa ggttgttttt gctagtcctt tagaacttat agcaaaagct ttgtgatgat
     9061 gaagatagta tttaaaggca aaagttctga atatgaaatt caaagatcgt gcttttgtgt
     9121 tgatgctttt gtgattaaag ataagattga agaacgagat ggtgttgatt ttatcacttc
     9181 aaatgtagat cttttggaat ttagtgatga cagttttact tttgaagaaa ttgtaaaaca
     9241 ttttaatatt tgtgatagtg aagatatgat tatcgttgaa gattttgaca tgaaatcaaa
     9301 caaagataat caaaaccaag aagatgatat agaacacaac atcctaaaat ccgaaaaaat
     9361 aatacatgaa aacacaaaac aaacaagtat gcaatttaaa aatttaaaat ttttttcaag
     9421 aatttttaaa aatgaaaatt ttcttt
//
LOCUS       DARATF010000066         9248 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.066, whole genome shotgun sequence.
ACCESSION   DARATF010000066 DARATF010000000
VERSION     DARATF010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9248
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.066"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            41..583
                     /locus_tag="SB502_001288"
     CDS             41..583
                     /locus_tag="SB502_001288"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434728.1"
                     /translation="MEYILKLVDLKQIIDDTKYPISNFKNISIDLKQEINIFSICCIN
                     QYQLITEDRFFGYLAEEINAPQIVSNAMSLLIEEKDYIDKAILLDSKKYFYVFGEYVA
                     YNINATCLYKNISSYNISNHDKKIIQIINKYGFLDKLKQYYKNTYEVLYPKINFPKND
                     YVKHNIELLLNLIEENDNAK"
     gene            585..1820
                     /locus_tag="SB502_001289"
     CDS             585..1820
                     /locus_tag="SB502_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEG0434729.1"
                     /translation="MTNLPQGWEVKKLGEIGEIVTGSTPSKSNLDFYGKDYPFFKPSD
                     FEQGYFLENAGDNLSKLGFDKARQLPPKTILVVCIGSLGKVALTRVIGSCNQQINAII
                     PHKNIISEYIYYYCISSKFQSILFSKAPQTTLAIFNKTEFSKLEIIYPKDIKEQERIV
                     GILDESFAKIDESIKILEQDLLNLDELMQSALQKAFNPLKDNAKENYKLPQGWEWKSL
                     GEISNLIQNGFAASKNNEIPSGYVHLRTHNISTDGNLNFDTLIKIKREFIKEKQSFIE
                     KNDILFNNTNSTELVGKTALVTQNYNYAFSNHLTKIKLKNQYNSKLVVFYFVLLLKNK
                     YFEKICHQWIGQSGINIDKLKKIQIPLPPLKEQEQIAKHLDFVFEKTKALKELYTKEL
                     KDYEELKQSLLNKAFKGEL"
     gene            1940..3010
                     /locus_tag="SB502_001290"
     CDS             1940..3010
                     /locus_tag="SB502_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEG0434730.1"
                     /translation="MKEFIPQKLPLNIELNANIYSLIIKASRKLAELNGLSKSIPNPS
                     ILINALILQEAKDSSEIENIITTHDELFLSRVDENKLTRAAKEVKDYESALKKGYELL
                     KKEQLLRNAHILEIQKRLERNNAGFRKQSGTMLKNPITGEIKHIPPQNPNDIQELMGN
                     LELYINDDSLDEFDFLVKMAIIHYQFESIHPFYDGNGRTGRIINILYLVYKGLLDFPI
                     LYLSAYIVKNKDEYYKLLQKVRDEGDILKWIEYILKGIEQTAAKTIETIIKIEKMMSN
                     VGEILQNKTNFYSKDFVELLFSHPYTKIDFLIKKLDISRQSASKYLKICENLGILECI
                     KMGRSNYYINIELLRLFRKGIF"
     gene            3011..4495
                     /locus_tag="SB502_001291"
     CDS             3011..4495
                     /locus_tag="SB502_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEG0434731.1"
                     /translation="MQNKIDKITDILRRDDGISGAMHYTEQIGWILFLKFLDDYETNL
                     KDLAFLDGKDYKSILQEKFSWSVWAAPKKDGKLDVKNALSGSDLLEFVNKELFPYLKN
                     FKNNDDFKSIEYKIGGIFEFIDNRIANGHTLREVINIIDEISFNKEDEVFALGEVYEK
                     LLKDMGSDGGNSGEFYTPRPLIKAMVEVIDPKPKERIYDPSCGSCGFLVESFLHILYK
                     DRTKGKKANLSVEELEFLKNDALFGKEKTPLSYAMGVMNMILHEVKSPNIIKTNTLNK
                     KITDITQSEKYEVILANPPFGGKEKEQIQENFPIKSNATELLFLQHILKSLKNNGRCA
                     IIVPEGVLFQNSNAFVSVKKDLLDDFNLECVLSLPSGVFLPYSAVKTNVLFFSKGKKC
                     ICEGDGVYYYELIPPYKLTKNKPLEYAHFKEFLKCYKERKITANSWLVSKKELEERNY
                     DLSAKNPNVKEEKILRTSEEILNSLEENLKIQQEYLNELKSILK"
     gene            complement(4573..5328)
                     /locus_tag="SB502_001292"
     CDS             complement(4573..5328)
                     /locus_tag="SB502_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEG0434732.1"
                     /translation="MQLRQKAREIFEKFFGKVEEKLLFTSDKEFFTNHINFTFGESFV
                     KANLDTQKYFLITLASTLAVGGKIEFKALLQGAIKNDISPIVIKEVIYQATPYVGFAR
                     VCDFLSLCNKVFKKLNIALVLTPQGTTTQENRKIKGREIQNAIFSEANITKMIETTPE
                     DKAFINDFLSANCFGDYYTRMGLDLKTRELLTLVYLISLGGLENQVKAHIQGNLNMEQ
                     SRKDLLNIIAALIPYIGYPKALNALNLLDDIKK"
     gene            complement(5436..5855)
                     /locus_tag="SB502_001293"
     CDS             complement(5436..5855)
                     /locus_tag="SB502_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEG0434733.1"
                     /translation="MQELEKAGIYGSFKGDSKFFSKNVKVSMMFKSNEWRNFSGALVE
                     FEASARSAWHTHPQGQTLIVTEGEIITKVPGQKAFIAKKGDVISCPIGVKHFHGATNT
                     SSGAHIALTGEKEGKNVEWLELVSDEEYEHALKEAKE"
     gene            complement(5913..7088)
                     /locus_tag="SB502_001294"
     CDS             complement(5913..7088)
                     /locus_tag="SB502_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434734.1"
                     /translation="MKNLNKASNAQIILVFCLGVFGILSTELGMMGIIPIVSQNFSVS
                     ISDAGWCVSIFALVITFCAPIVPLLCANFNPKKLMLICLAVFILSSLTSAFVGEFWQL
                     LILRAIPAFFHPIYIALALSMVTNLVEDKKEIPKATAKIFAAVSAGMVLGVPMTSYFG
                     GNFSFKMAMLFFVFLNTLSFIATLFFVPDFKKVNSVKISKQLLILRYPLLWISILCVI
                     CINAGIWGFYSYFSDFLHSVGKMNFTLISIVLAIYGFSNIIGNYIAGKTLVKNANFTL
                     ILTPLIMIGFYILLFSFYSEIILIIFAFILGILAGVMNNGTHFMISYPFPKAANFSNG
                     LFISVANIGLSTGTAICGLVISLSDTRYIIVNTIVLLILGIIMIFIRSRIEKMKLRF"
     gene            complement(7264..7359)
                     /locus_tag="SB502_001295"
                     /pseudo
     CDS             complement(7264..7359)
                     /locus_tag="SB502_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344926.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
     gene            7463..7756
                     /locus_tag="SB502_001296"
     CDS             7463..7756
                     /locus_tag="SB502_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEG0434735.1"
                     /translation="MQKFLTIISAINDESRILILYHLLRYKELCVCDLQELLNMGQSR
                     LSRHLKILKDAGFLYVRRQGTWAYYGINNELLKLHLNLFENIKNLELKNAIKK"
     gene            complement(7792..8223)
                     /locus_tag="SB502_001297"
     CDS             complement(7792..8223)
                     /locus_tag="SB502_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEG0434736.1"
                     /translation="MAYTIKKVEKETKVSAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWVKWIEWLRISGMPIEQIKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKLHKFKG"
     gene            8303..>9248
                     /locus_tag="SB502_001298"
     CDS             8303..>9248
                     /locus_tag="SB502_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEG0434737.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLYESTLKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDIANLPYQSLITEENIINNVG
                     PILKYYRHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTILKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVANTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKLNGDNNFFSYKLNNEERLGACTKVFAYTACI
                     TESADIINKPIFKAAYIQVIALIVMISISVILLYFIVSK"
BASE COUNT         3558 a         1281 c         1294 g         3115 t
ORIGIN      
        1 tggactttca aaaatagata actccaaggt aaaggaaaaa ttggaatata tattaaaatt
       61 agtagattta aaacaaatta ttgatgatac taaataccca ataagtaatt ttaaaaatat
      121 ttctattgat ttaaaacaag aaataaacat ttttagcatt tgttgcataa atcaatatca
      181 actaataacc gaagatagat tttttggata tttagcagaa gaaataaatg ctccacaaat
      241 agtaagtaat gccatgtctt tattaattga agaaaaagat tatattgata aagctatttt
      301 gctggattca aaaaaatatt tttatgtttt tggtgaatat gtggcataca atataaacgc
      361 cacttgctta tataaaaata tttctagcta taatatttca aatcatgaca agaaaataat
      421 tcaaattata aacaaatatg gttttttgga taaattaaaa caatattata aaaatactta
      481 tgaagtttta tatcccaaaa ttaattttcc aaaaaatgat tatgtaaagc ataatataga
      541 attattgtta aatctaatag aagaaaatga taatgcaaaa taaaatgaca aatttaccgc
      601 agggttggga agttaaaaag cttggtgaaa taggtgaaat tgttacgggt tcaacaccta
      661 gtaaaagtaa tttagatttt tatggaaaag attatccatt ttttaagccg agtgatttcg
      721 agcaaggata ttttttagaa aatgctgggg acaatctatc aaaactaggc tttgataaag
      781 ctagacagct tccgcctaaa acaattcttg tggtttgtat aggttctttg ggtaaagtag
      841 cactaactag agttattggg agttgtaacc aacaaataaa cgcaattatt cctcacaaaa
      901 atataatttc cgagtatatt tattattatt gcatatcttc taaatttcag tctatattat
      961 tttcaaaagc accacaaaca actttagcta ttttcaataa gactgaattt tccaaactcg
     1021 aaattattta tccaaaagac ataaaagagc aagaaaggat agtgggaatt ttagatgaga
     1081 gttttgcaaa gatagatgag agtataaaaa tcttagagca ggatttgcta aatttagatg
     1141 agttaatgca aagtgccttg caaaaagctt tcaatccctt aaaagacaat gctaaagaaa
     1201 actacaaact cccacaaggt tgggaatgga aaagcttagg ggagatatca aatttaatcc
     1261 aaaatggctt cgctgctagt aaaaataatg aaattccaag tggatatgtg catttaagga
     1321 cacataatat ttcaacagat ggaaatttaa attttgatac tttaataaaa attaaaagag
     1381 aatttatcaa agaaaagcaa tcatttattg agaaaaatga tattttattt aacaatacta
     1441 atagcacaga actagttggc aaaactgcat tagttacaca aaattataat tatgctttta
     1501 gtaatcactt gacaaaaata aaattaaaaa atcaatataa ctctaaatta gttgtatttt
     1561 attttgtctt attgttgaaa aataaatatt ttgaaaaaat atgccaccaa tggatagggc
     1621 aaagtggaat aaatatagat aaattaaaga aaattcaaat ccccctaccc ccactcaaag
     1681 agcaagagca aatcgcaaag catttagatt ttgtctttga aaagacaaag gctttaaaag
     1741 agctttacac taaagaacta aaagattatg aagagcttaa gcaatccttg cttaataaag
     1801 cttttaaggg agaattataa tgttaaaaaa tttgccaaat tttaacacat tggcttgata
     1861 tgttaaaaat ttttgatttt tttaacatat ttttttataa tgttaaaatt tttagaaaaa
     1921 attaacatat tggaaaatta tgaaagaatt tatacctcaa aaattgcctt taaatataga
     1981 attaaatgca aatatttata gtcttatcat taaagcttct agaaaattag cagagttaaa
     2041 tggacttagt aaaagcatac caaatccaag tattttaatc aatgctttga ttttacaaga
     2101 agcaaaagat tcgagtgaga tagaaaatat catcacaaca catgatgaac tttttttatc
     2161 acgagttgat gaaaacaaac tcacaagagc agcaaaagaa gtgaaagatt atgaaagtgc
     2221 tttgaaaaaa ggatatgagt tattaaaaaa agaacagtta ttaagaaatg cacatatttt
     2281 agaaattcaa aaaagattag aaagaaataa tgcaggtttt agaaaacaaa gtggaactat
     2341 gcttaaaaat cctattacag gagaaataaa acacatacca ccccaaaatc ctaatgatat
     2401 acaagaactt atgggaaatt tagaactata cattaacgat gatagtttag atgaatttga
     2461 ttttttggta aagatggcaa ttatacatta tcaatttgaa agcattcatc ctttttatga
     2521 tggcaatggc agaacgggta ggattataaa tatactttat ttagtatata aaggactttt
     2581 ggattttcct attttatatc ttagtgctta tatagtaaaa aataaagatg agtattataa
     2641 gcttttgcaa aaagtgcgtg atgaagggga tattttaaag tggatagaat acatacttaa
     2701 aggcatagag caaaccgctg caaaaactat tgaaactatc attaagatag aaaaaatgat
     2761 gtctaatgta ggtgaaattt tacaaaataa aacgaatttt tatagtaaag attttgtgga
     2821 gcttttgttt tctcatcctt atacaaagat agatttttta ataaaaaaat tagacatttc
     2881 aagacaaagt gcttcaaaat atcttaaaat ttgtgaaaat ttaggcatat tagagtgtat
     2941 taaaatgggt agaagtaatt attatataaa tatagaactt ttaagacttt ttagaaaagg
     3001 aattttttaa atgcaaaata aaatcgataa aatcacagat attctaagaa gagatgatgg
     3061 cataagtggt gctatgcact atacagagca gattggctgg atactttttt taaaattttt
     3121 agatgattat gagacaaatt taaaagattt agcgttttta gatggcaaag attataaaag
     3181 cattttgcaa gaaaaattta gctggagtgt ttgggcagcg cctaaaaaag atggcaaact
     3241 tgatgtaaaa aatgctttaa gtggatcgga tttgcttgaa tttgtaaata aagagctttt
     3301 tccttatctt aaaaatttta aaaataatga tgattttaaa agtatagagt ataaaatcgg
     3361 tggaattttt gaatttatag acaatcgcat agcaaatgga catactttaa gagaagtgat
     3421 aaatatcatt gatgagatta gttttaataa agaagatgaa gtatttgcct taggtgaagt
     3481 ttatgaaaaa cttctaaaag atatgggtag cgatggtgga aatagtggag aattttacac
     3541 ccctcgtcct ttgataaagg ctatggtgga agtaatagat cctaaaccaa aagaaagaat
     3601 ttatgatcct tcttgtggta gttgtggatt tttagttgag agttttttac atattttata
     3661 taaagataga accaaaggca aaaaagcaaa tttaagcgta gaagagcttg aatttttaaa
     3721 aaatgatgct ctttttggta aagaaaaaac tccgcttagc tacgcaatgg gcgtgatgaa
     3781 tatgatcttg cacgaggtaa aatctccaaa tatcatcaaa acaaacactc taaataaaaa
     3841 aatcacagac ataacccaaa gcgaaaaata cgaagtgatt ttggcaaatc caccctttgg
     3901 aggtaaagaa aaagaacaaa ttcaagaaaa ttttcctata aaatcaaacg ctactgaact
     3961 tttgttttta caacacattt taaaatcttt aaaaaacaac ggaagatgtg cgatcatcgt
     4021 gcctgaaggc gtgctttttc aaaattcaaa tgcctttgtg agtgtaaaaa aagatttact
     4081 agatgatttt aatttagaat gcgttttgag tttgccaagt ggggtatttt tgccttatag
     4141 tgctgttaag actaatgtgc tttttttctc taaaggtaaa aaatgtattt gtgaaggcga
     4201 tggagtttat tactacgaac ttataccgcc ttataaactt actaaaaata agcctttaga
     4261 atacgcacat tttaaagaat ttctaaaatg ctacaaagaa agaaaaatca ctgctaattc
     4321 ttggcttgtt agcaaaaaag agcttgaaga aagaaactat gatctaagtg ctaaaaatcc
     4381 aaatgtaaaa gaagaaaaaa tcctaagaac tagcgaagag attttaaatt ctttagaaga
     4441 aaatctaaaa atacaacaag aatatctaaa tgagcttaaa agcatactaa aataattgca
     4501 agttttttga taaaaactaa tttacaaata acttctaagc tcaatttaca ataaatattt
     4561 attgcttgca ttctactttt taatatcatc aagcaaattt agggcattta aagcttttgg
     4621 ataaccgata tatggaataa gagctgcaat gatatttagc aaatcttttc tactttgctc
     4681 catgttaaga ttgccttgta tgtgagcttt tacttgattt tctagcccac caagtgagat
     4741 aagatataca agggttaaaa gctctctagt ttttagatca agtcccatgc gtgtatagta
     4801 gtctccaaaa caattcgcac tcaaaaaatc atttataaaa gctttatctt ctggtgtagt
     4861 ttctatcatt ttagtgatat tggcttcact aaaaatagca ttttgtattt ccctgccttt
     4921 tattttgcga ttttcttgcg tagtagtacc ttgtggagtt aaaactaagg cgatatttag
     4981 ttttttaaac actttattgc aaaggcttaa aaaatcacat actctagcaa aacccacata
     5041 aggcgtagct tgataaatca cttctttaat gacaatagga cttatatcgt tcttgattgc
     5101 accttgaagt aaagctttaa actctatttt tccacctact gctaaagtag aagcaagggt
     5161 gattaaaaaa tatttttgtg tatccaaatt tgcttttaca aaactctcgc caaaagtaaa
     5221 attaatgtga ttagtaaaaa actccttatc gcttgtaaaa agcagttttt cttccacttt
     5281 tccaaaaaat ttttcaaaaa tttctcttgc tttttgtctt aattgcatgg ttttatcctt
     5341 tgtgattttt aaagtttata aaaaagagca tttaaaatac tcaaaaaaaa cataaaagtt
     5401 tttataaaat ttttgtgttt tatttacaaa tttctttact cttttgcttc ttttaaggca
     5461 tgttcatatt cttcatcgct tacaagctca agccattcta catttttacc ctctttctcg
     5521 cctgtaagtg ctatgtgtgc tccactactt gtattagttg caccatgaaa atgctttact
     5581 cctataggac agcttatcac atcgcctttt ttagctataa aggctttttg gcctggaact
     5641 tttgtgatga tttcaccctc tgttacgatt aaggtttgtc cttgaggatg agtatgccat
     5701 gcacttctag cactggcttc aaattcaacc aaagccccgc taaaatttct ccactcattt
     5761 gatttaaaca tcatagaaac ttttacattt ttgctaaaaa atttactatc acctttaaaa
     5821 cttccataaa ttcctgcttt ttctaattct tgcattttac ctcctttttt agtattataa
     5881 aacatgagag ctactctaag tcaagtaaaa atttaaaatc ttaatttcat tttttctatc
     5941 ctacttctta taaaaatcat gataattcct aaaatcaaca aaacaatagt atttacgata
     6001 atataacgcg tatcgctcaa agaaatcaca agtccacaaa tagcagttcc ggtgcttaat
     6061 cctatattgg ccacgcttat aaaaagtcca ttgctaaaat tagcagcctt tggaaaggga
     6121 taacttatca taaaatgtgt gccgttattc atcacacctg ctaaaattcc taatataaag
     6181 gcaaatatta taagtataat ttcactataa aaactaaaaa gtaaaatata aaatcctatc
     6241 ataattaaag gtgttaaaat caaagtaaaa tttgcgtttt taacaagggt ctttccggct
     6301 atataattgc ctataatatt tgaaaaacca taaatagcca atacaatact aattaaagta
     6361 aaattcatct ttcctacact atgtaagaaa tcagaaaaat aagagtaaaa accccaaatt
     6421 ccagcattta tacaaataac acaaagtatg ctaatccata aaagcgggta tcttaaaata
     6481 agcaattgtt tgcttatttt tacagaattt acttttttaa aatcaggaac aaaaaataaa
     6541 gttgctataa aagataaagt atttaaaaat acaaaaaata acattgccat tttaaaacta
     6601 aaatttccac caaaataact agtcataggt acacccaaaa ccattccagc actaactgct
     6661 gcaaaaatct tagctgtagc ttttggaatt tctttcttat cttcgaccaa atttgtaacc
     6721 atacttagag caagagctat ataaatagga tgaaaaaaag caggaatagc tcttaaaata
     6781 agcaattgcc aaaattcacc cacaaaagcg gaagttaacg agcttaagat aaacacagct
     6841 aaacaaataa gcataagttt tttaggattg aaatttgcac aaagtagcgg gacaataggg
     6901 gcgcaaaaag ttatcacgag tgcaaaaata ctcacacacc aacccgcatc tgaaatactt
     6961 acactgaaat tttgagaaac aataggaatt atacccatca tccctagttc tgtgctcaaa
     7021 atcccaaata cccctaaaca aaatactaga ataatttgag catttgaagc tttatttaaa
     7081 tttttcattt tatcctttca attaatattt ttaaaagtat aaaagatgag agtaggtcta
     7141 agtcaataac ctaaaataaa aatatttatc tatattaaat aaaatcttta gaaaaatcta
     7201 aaacttcaaa ataagcattt aaaagaaata aaagatgcct taaaagcata agatatcttt
     7261 tatttatagg cttattactc caatgcgtgt atttttatcg caagaattaa gcactatgtc
     7321 tatcatagca ctagcataat cactatagct tattttactc aaacaaatgt ttaaaataaa
     7381 atttttattt ttattggtta tgattatttt aggcgtggct atatcttttg gaatttttat
     7441 taatttaatt taaggaaata aaatgcaaaa atttttaacc attatttcag caatcaatga
     7501 tgaaagtagg attttgattt tgtatcatct tttaagatac aaagaacttt gtgtttgtga
     7561 tttacaagaa cttttaaaca tgggtcaatc aagactttca agacatttaa aaattttaaa
     7621 agatgcaggt tttttgtatg taaggcgtca aggaacttgg gcgtattatg ggattaataa
     7681 tgagctttta aaactgcatt taaatctttt tgaaaatatc aaaaatttag aacttaaaaa
     7741 tgctattaaa aaatgaaaat attattaccc aaatttgccc ttaatataaa atcaaccctt
     7801 aaacttatgc aatttatcac aaggttgata gtccttgctt tctggattaa acccatcgac
     7861 ttcatttgca agcatttctt cataaatttt tatctttttg cttaaaactt tttcactttc
     7921 ttttaatgtt ttaatctggt tttgtaattt tttctttgtt tgctttaaca tctcttgtct
     7981 ctctttggca gtttttatac ccaaagagca aagttttata taatgtttga tttgttctat
     8041 tggcatacct gaaattctaa gccattctat ccattttacc cattctatat cgctttttga
     8101 aaaatatttc acactatttt catctttttg aacaaaagga aacaaacctt ttttagccca
     8161 aaatcttaaa gtatgagcac taacttttgt ttctttttct acttttttta tagtataagc
     8221 catattttct cctttattta agataaaaat aaaaatttat tttatttttt tgtgataaaa
     8281 taatagccaa attattagtt ttatgctaaa aataacaaag attaaaagga aaataatgaa
     8341 tagtattaaa atcaaacttt ccctcattgc aaatttaatt gcaatttttg ccttaattgt
     8401 tctaggtatt gtaagttttt attttacaaa aacctcacta tatgaaagca ctcttaaaaa
     8461 tcaaactgat ctacttaaag tcacacaatc taccgttgaa gatttccgtt ccacaaatca
     8521 atcttttact agagctttag aaaaagatat cgcgaactta ccttatcaat ctttaatcac
     8581 tgaagaaaat attattaaca atgttggtcc aatattgaaa tattatcgtc atagtataaa
     8641 tgcactaaat gtttatttag gtttaaacaa tggaaaagtt ttacttagtc aaaaatctaa
     8701 tgatgcaaaa atgcctgaat tacgtgatga tttagatata aagacaaaag attggtatca
     8761 agaagcttta aaaacaaatg atatttttgt tacaccagca tatttagata caattttaaa
     8821 acaatatgta ataacgtatt ctaaagctat ttataaagat ggcaaaatca taggagtact
     8881 gggtgtcgat ataccatcag aagatttgca aaatttagtt gcaaacactc ctggaaatac
     8941 ttttttattt gatcaaaaaa ataaaatatt tgcagcaacc aataaagaat tattaaatcc
     9001 atccattgat cattctcctg ttctaaatgc atataaactc aatggtgata acaacttctt
     9061 ctcttataag ttaaataatg aagaaagact tggagcttgt actaaagtct ttgcttatac
     9121 agcttgtatt accgaaagcg ctgatattat aaataaacct atatttaaag cagcatatat
     9181 acaagttata gccttaattg ttatgatatc tattagcgtc atcctccttt atttcatcgt
     9241 atcaaaat
//
LOCUS       DARATF010000067         8646 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.067, whole genome shotgun sequence.
ACCESSION   DARATF010000067 DARATF010000000
VERSION     DARATF010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8646
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.067"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            85..501
                     /locus_tag="SB502_001299"
     CDS             85..501
                     /locus_tag="SB502_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEG0434738.1"
                     /translation="MKIKFLNIITILSLSLNADIIISADNLPNVSKEFLQHNFKAPIG
                     IVQKDKNSYEVYLSDGTELEFDIDGAWKEIENKAFPFDLDFLPQNLANIIKSEFPNTK
                     AREIERKINHYKIKLDNDIKILIDFNGTILYKEFDD"
     gene            complement(510..2126)
                     /locus_tag="SB502_001300"
     CDS             complement(510..2126)
                     /locus_tag="SB502_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEG0434739.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLSKVPVEVKKDNTLWVFFVLLIFIIAL
                     FISLGYFARKKELAKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNDEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLKESNLSEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEYDDVKDIMQV"
     gene            complement(2130..3380)
                     /gene="mtaB"
                     /locus_tag="SB502_001301"
     CDS             complement(2130..3380)
                     /gene="mtaB"
                     /locus_tag="SB502_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEG0434740.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRL
                     GSLEPAQLDESFLEILDEAWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEELWQEALRNFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNTLKSIVEKNNYEFRKKNQVSLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIVISEYEVQEKSNFTNLKG"
     gene            complement(3377..4948)
                     /locus_tag="SB502_001302"
     CDS             complement(3377..4948)
                     /locus_tag="SB502_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HEG0434741.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
                     KELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQ
                     SLRAVNILVAIVIVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIG
                     DIIDISFLRITLYEELTLETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGI
                     DISVTFDSNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFF
                     EHWGMRISAWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHF
                     EQHHENMYFHARNKD"
     gene            complement(4945..6000)
                     /locus_tag="SB502_001303"
     CDS             complement(4945..6000)
                     /locus_tag="SB502_001303"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEG0434742.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAKEIFIATVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCEGSFLK
                     TLSSRELAAGMAEFIKMAAMFDDSILDFIEKIDEKSFLNATCENEIFTQIIARSIELK
                     SRVVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGF
                     LDKMQSQRIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLI
                     KGDISKEDIIATLREFQ"
     gene            complement(6046..7446)
                     /locus_tag="SB502_001304"
     CDS             complement(6046..7446)
                     /locus_tag="SB502_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HEG0434743.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGRNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            7476..8597
                     /gene="tgt"
                     /locus_tag="SB502_001305"
     CDS             7476..8597
                     /gene="tgt"
                     /locus_tag="SB502_001305"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEG0434744.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAIAYHKNMQNKGIGIGQNIFGIIQGGTDYEERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINDHEVIDSTCSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
BASE COUNT         2998 a         1490 c         1012 g         3146 t
ORIGIN      
        1 attttttata atattgtctt aaaattcaca taaaattcac ataaattctt tacaatttta
       61 ctaaaaaata atttaggaaa aatattgaaa attaaatttt taaatattat tactatttta
      121 agtttatctt taaatgctga tataataatt tctgctgata atttaccaaa tgtttctaaa
      181 gaatttttac aacataattt caaagcgcct atagggatcg tgcaaaaaga caaaaattcc
      241 tatgaagtct atcttagcga tggaacagag cttgaatttg atatagatgg agcttggaag
      301 gaaattgaaa ataaagcctt tccttttgat ctagattttt tacctcaaaa tttagccaat
      361 atcatcaaaa gcgaatttcc aaatacaaaa gctagagaaa ttgaaagaaa aatcaaccat
      421 tataagatta aacttgataa cgatataaaa attcttatag attttaatgg aactatctta
      481 tataaagaat ttgatgatta aacatatcat caaacctgca ttatatcttt aacatcgtca
      541 tattctatct tttctttttc aagcaaaagc tctgataatt ttaaaatttt atccttcata
      601 gaatttaaaa attcatccat ttcttttttt tgttcactta aatttgactc tttcaacata
      661 tcaaaactca acatataatc aagcaattct ttaatcttta aaaaatcatc ttgcgagtta
      721 gtataacttt cattgtaaat caatctcatg gctctagaac cagccaaata aacttttata
      781 cgattgataa gctctgattt tgatcttata ttatgctcat attctttaaa acgatcttca
      841 atgagagtga ttttttcaaa tcctatgtca aaataatacg cactcaaagc ttttgcagct
      901 tgataagtgg cttgaatttt cttctcttca tcattaaaac ttaaaatctt tttcttacct
      961 aaaagaactt tatttaatac agcataaaaa tcgctttcct caactaaagc actatttctt
     1021 cttaaagcat taattgctgc ttcattgacc aaagtttcaa gccctgctcc actaaaacct
     1081 acgcttgctt tagcgatttt atttaaattg atattattgt ttttatcttt catataaatt
     1141 tctaaaattt taagtctatc cttaaaatca ggcaaagata aaaaaattct cctatcaaaa
     1201 cgccccgaac gcaataaagc aggatccata agttcgattt tatttgtcgc agctataaca
     1261 ataaccccac tattatcctc aaaaccatcc atttgagtta aaagttgatt taaagtgcta
     1321 tctctttcaa catttgacat ttctcctctt gccttaccta cggcatctat ttcatcaata
     1381 aaaactatgc taggcgccat cattttagct tttgaaaaaa gctctctaac tctttttgca
     1441 cccataccta cataaatttc aacaaaactt gaaccacttt gataaaaaaa tggcacccct
     1501 gcttctcctg caactgcttt tgctatcaat gtttttccta caccaggtgg gcctaccatt
     1561 aaaacacctt ttggcatttt tacaccaaat tctttatatt ttttaggatt ttgtaaaaaa
     1621 tccacaagtt cgcttagctc cattttaact tcatcaacac ctgctacatc attaaaagta
     1681 atatttgaaa tcacaggttt tatatgggaa ctttctaaat ttatatttga attttgagct
     1741 tgagtgtgat tttgattctt atttgatatt ggatatttag ccaactcttt tttacgagca
     1801 aaataaccaa gacttataaa aagtgcgata ataaaaataa gtaaaacaaa aaacacccaa
     1861 agcgtattat cttttttaac ctctacggga acttttgata aaagtgtttt tatatctatg
     1921 ccatctttta taattacgta attttcacct tctgccttaa gccaaatttc gtctttatca
     1981 atcacagctt tttggattaa attttggctt aatagacttt gataaagatt ttcatctata
     2041 tatttaggtt catttttaaa atataaaatt cccaaaagca tacataaaac cataaaagat
     2101 gctaaaatta tctttttatt tttcattatc tagcctttta aatttgtaaa gttagacttt
     2161 tcttgtactt catattcaga tataacgatc cattctttag ctatatcttt atcactttta
     2221 attttgatct tattaaaaaa ctgatcataa ccctcaaaaa aaccatcttt ttgattttct
     2281 accaaaactt caagtgaaac ttgatttttt ttcctaaatt cataattatt tttttctact
     2341 atggatttta aagtgtttag cctttcttta gctaaagttc catttatcac atctttcatg
     2401 gtagcagaat gcgtgttgtt tctagggcta aaaataaaag catggatatg agtgagtgga
     2461 aattctttaa aatttcttaa agcttcttgc catagctctt cactctcgcc tggatgagct
     2521 actataaaat ccgtccctaa agcatatcct ttgcttgcta tagtattaaa aagctttaaa
     2581 tcattatccg tatgtgatct tcttctcatt atacgaagca ttttttcact tgtatgttgc
     2641 aatgcaatat gtaaatgcct ttcaagccaa gcttcatcta agatttctaa aaaactttca
     2701 tcaagctgtg caggttctaa actacctagc cttatgcgtt ttatacctaa aatttgtccc
     2761 attttttgca aaagcttgcc tagggttgtg ccatttttaa gcccatatga acctatatta
     2821 gtccctgtta aaacaatttc actataacca ttagctccca aaatttcaac ctgttttaaa
     2881 agagcttttt catccacact tcttgatttt cccctcacgc taggaataat acaataagaa
     2941 caagcaaaat cacaaccttc ttgaattttc acaaaagctt tggtatgatt ttcatactca
     3001 caaactatat ctttatcaat aaaatttaaa tttccaagtt cataaaaact tgtctttgct
     3061 cctaaaaatt cattgatttt atctttattt gacgctccaa gcactccaaa aacttgcttt
     3121 ttatctaaaa gctccttacc tttgcttaca gcaccacaac ctgtaagtat aactttaatg
     3181 cctttttttt gcatggtatt tacataagac tttatcccgc tatcagctcc atttgtaacc
     3241 gtgcaagaat ttacaacgat aatttgtgct ttattctcat catttataat ctcataatct
     3301 tttacataac tttttaaaag ctctgtatca taaatatttg tgcgacaccc aaaggtttta
     3361 aaaaaaactt tttctttcaa tccttattcc ttgcatgaaa atacatattt tcatgatgtt
     3421 gttcaaaatg attttgattt aaatttccta aatataaatt ttgcgatgga taagcaattt
     3481 ttatatcttt atgcttatta aattctttta taatctcttt gctaatcgta cttcttaata
     3541 ccaaagccgc ataagcatta gtcatatacc atgcagaaat tctcattccc caatgttcaa
     3601 aaaacataaa aaaccttggc tccactttag gatttttaat actatattca tgttgtaaac
     3661 gagctatatt ttttctagca agctcagtat aacctttggc atggcgtgta acaatatttt
     3721 ccacaatttc ttgagctttg tcaagattgc tatcaaaagt aacacttata tcaatgccat
     3781 caagcacggt tttcatacca tgatgggtat aattagcaag caaatttgta aaaacatagt
     3841 tattaggaat aaatataata cgcccactac gacgattttt attataagtt tcaagcgtaa
     3901 gctcttcata aagagtaatg cgtaaaaaag aaatgtctat aatatctcct atataggtag
     3961 tatcattttg aaaaactttt acacgatccc ctactctaaa acttccgcca aaaataatca
     4021 cacaccatcc aagcatagac ataaacatat ctttcatagc aatagctaag cccgcagagg
     4081 caaaaccaag tatagttaca agataagtaa tattttctat ataagcaaag agcaaaataa
     4141 gaaaaataat atttatatta ataaaattaa taatcttcgt agcagtataa tatctttcac
     4201 tatctttaat gtatttttta gcaataaatt tcaacataaa agctatagct ataacaataa
     4261 caatagcaac aagtatattt acagccctta agctttgaac tttaatctca gcacttactc
     4321 gagaaagctc ttcatcaatt tttttctcat aaacagaata agaaacacta gcaaaattta
     4381 aagcttgctc aaattcttcc aactttttat ccgaagcttt taaagcttct atattctcaa
     4441 cacttggttt aagctcaact aattccttaa gttctgagtt tttttccctg attttatcta
     4501 ctaaattttt aaaatcatta aatttaaata tatattcttc cttttctcct tttaatttct
     4561 taatatgaga aaaagctcct ataatagcca aaggattagt aagcttagat aaagtttcta
     4621 tattatcagg ggcactaaga ctttgtgcaa aatttaaatc tttatattct ttaagcaggc
     4681 tcaattgctc ttctaaattt gctatcttgc gtttaagttc ttcttgttgg tgaatatcgg
     4741 aagtcttttt taaattaaga tttaaaatga ttaattcatc atttatatct tgatatttta
     4801 taaaattttc ataacgtata ttccaaatac tagcactgat tacagtattt aaagtattaa
     4861 ttttctcatt tatattatta ataatagtcc gatttacatc accaaaagca aaaacaacaa
     4921 aaaaggttaa aataataatt tttttcattg gaattctctt aaagttgcaa ttatatcttc
     4981 tttagaaata tcacctttta tcaaaccctt acccaaagga ctagcaagaa caaaattgat
     5041 ttttttatta gagctttttt tatccatgaa aaaagcttca taaaattcat ctacattgtt
     5101 gattttatat gatattggca aaccgaattt aagtaaaata tcttttattc tttgactttg
     5161 cattttatcc aaaaacccta aatttaaagc caattgattt gccataacca tacctatagc
     5221 caccgcttct ccgtgtaaat aaagcttata atctgtaaaa ttttctataa catgagcaaa
     5281 agtatgccca taatttaaaa gcattctaag ccctgattct ttttcatctt gttcaacaac
     5341 ccttgattta agttctatgc ttcttgctat aatttgagta aaaatttcat tctcacaagt
     5401 agcatttaag aaactttttt catcaatttt ttctataaaa tcaagtatac tatcatcaaa
     5461 cattgctgcc attttaataa attcagccat gcctgcagca agttctctag agctcaaagt
     5521 ctttaaaaaa gaaccctcac aatatacagc tttaggttga taaaaagtgc caataagatt
     5581 tttaccaaaa ttattattaa cacctgtttt tccacctact gctgcatcaa cgcaagctaa
     5641 aagtgtagta ggaatattta taaaatcaat acctctttga taaatactag cagcaaatcc
     5701 gcccatatca ctaatcacgc caccaccaaa acttataagc acgctttttc tatccaattt
     5761 agaattaaac atttggttta aaatttcttc catggtgctt aaatttttat attcttcacc
     5821 atcttttaca gtggcaataa aaatttcttt tgccttaatt ttagaaagta atgttttcaa
     5881 atgaagacct gaaatcttag gatttgaaag tataaaaacc ttactatcaa attctaattc
     5941 ttcaagttca tcaatataaa ccttataagc attttctttt aacttaactt ctacttgcat
     6001 tgaactactc tttttgcgtt tattctatca catttaatta attatttatt ctactggtat
     6061 gaaaagttgg taattttgtc tcattttata ataatgccta tttaaatttg tacttaaatt
     6121 tctgccaaaa tctctattta gtaattcttt ttgaaaactc acaaattgta acaaatcttc
     6181 gcgatattgc aaatttaaaa gagggttttc atcattttta ttaataattt gtatattttt
     6241 atcataaagc ttagataaac ttctaaaata ctcctccata tctgtagtat tttgagaatt
     6301 tggattataa taatataaaa taactccaaa atcaagctgt ttacttaaat cagtaatgac
     6361 atttgcattg ttttcaagtt cactctcatc agcacttaaa ataatcgctt ctttaagctc
     6421 atcaaaagaa gcttcaccca ctttcataat aggaattttt aaatcaaaaa aagcttgttt
     6481 ttctttctca aaatttttta tatcagttac aactaatcct atatcattat tttgcaacca
     6541 tgtggaaatt tgtttaaaat ccgtgttgaa ataatcaaaa aacacacctt ctttatcctc
     6601 agaaagtttt tttaattttt catacattac ccctaattta ggattgataa catgtataaa
     6661 aaatcttttt gcattgcttt tttgagttaa ttttaaagta gtatcaagca ctctttcttg
     6721 catattttga ttcatatttt tcatatcaat taaagcaaaa acattacttc caaaaggcat
     6781 aggaaattgc cctgctttgc ctcttatatt atgaaaaata ctttgtaaaa caacaggatc
     6841 tccaacgatc aaaatgctat catttggctc taaaacaaaa gatggtttta caaaataaat
     6901 tttagaattt ctataaataa ggactatgcg ccaccttttt tgttgtattg aacttatgtg
     6961 cctataagca aaaatagacc ctgctggaat ttttacttcc ataatctccc caactccaag
     7021 tcctatatac tgagctgtta aagcaatatc tggtaaaaaa tccataaatc tacggcttaa
     7081 agtcattcta gcatcagcta aatttgcatg agtatcatta acacttaacc cccaaaaatc
     7141 cattatttct atttctaaat ttggatttaa agaacgcaaa gcctcataac tttttttagt
     7201 ttcaaattca tcttgcatat aaataaaagc ctgtttaaaa tccttactca taatattttc
     7261 aagacgcgct gtgcttgtag gatcaaaata atgcaagtca atatactcac tagaaatatt
     7321 taagttattt ttttcactat tttgacacac tactgtaaaa aagtaaccta agcctttttc
     7381 aaaacaaagc ctttctaaga aatgctttgc taaaatacca tctattataa ttaaaatatt
     7441 attcatttta aactccaaaa aggaaattat aacaaatgga atttaaatta aagcataaag
     7501 atggaatggc aagggtttgt gaaatcacta ccgcacacag cactttttta acccctgttt
     7561 ttatgcctgt tggcacagta ggagcggtta aaagtcttga tgctaatgat atgaaaaatg
     7621 agcttgatgc aaaaattatt ttagcaaata cctatcacat gtacttgcgt ccaacttcca
     7681 aagtagtaaa agattttgga ggtttacatg gatttacgaa atttgataga agttttttaa
     7741 ccgatagtgg tggttttcaa gctttttctt taagtaaaaa ttccaaacat tttaatgaag
     7801 gtatagaatt taaaagtcac attgatggaa gtcgtcatct ttttactcca aaaagtgttt
     7861 tagataccca atatgatttt aactctgata ttatgatgat tttagatgat ttagtagccc
     7921 tacctgcaac caaagaaagg gttaaaattt ctgttgatcg cactatactt tgggcaaaag
     7981 aagctattgc ttatcataaa aatatgcaaa ataaaggtat aggtataggg caaaatattt
     8041 ttggtattat ccaaggtggc acagattatg aagaaagaaa gcgttgtgct ttaagtttaa
     8101 acgaaatgcc atttgatggt ttagctatag gtgggcttag cgtgggcgaa gaaaacgcct
     8161 tgatgtacga aacagtccaa aacttaaacc cttatctaga tgaaaatcgt ccaagatatt
     8221 taatgggcgt aggaacgcct gaagatttag tagaaaatgt tgagcgagga gtagatatgt
     8281 ttgactgtgt gatgccaact agaaatgcaa gaaatggaac atttttcaca agttttggaa
     8341 aatttaatat caaaaaagca gaatttatca acgatcatga agttatagat tctacttgct
     8401 catgttatac ttgtcgtaat ttttcaaggg gttatttaaa ccatcttttt aaagctaaag
     8461 aacttacttt ttttcgtttg gcaagtctgc acaatctaca ttattatctt gaacttgcaa
     8521 gaaagatgcg tgaagcaatt ttgaacaatt cttttacgca atttaaaaga aatttttatc
     8581 acttaagagg caaataaaat gctagagcta cacgaaaatc taaaaaaaat cctgcaagca
     8641 aagaat
//
LOCUS       DARATF010000068         8421 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.068, whole genome shotgun sequence.
ACCESSION   DARATF010000068 DARATF010000000
VERSION     DARATF010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8421
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.068"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..581
                     /locus_tag="SB502_001306"
     CDS             <1..581
                     /locus_tag="SB502_001306"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEG0434745.1"
                     /translation="HSKLNFKQDYKIFKECLKIIKLFKAKNILIFIPLHYEPNLIKFR
                     HILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSFFKAKIDLAIVPVIGVD
                     KNLKRIGHGQGFYDRFFENLNYKPHIIFIQSIDALSQNNLTQKHDISGKLYINPYKKY
                     YKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            502..2055
                     /gene="rny"
                     /locus_tag="SB502_001307"
     CDS             502..2055
                     /gene="rny"
                     /locus_tag="SB502_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEG0434746.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKFQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQNLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            2064..2621
                     /locus_tag="SB502_001308"
     CDS             2064..2621
                     /locus_tag="SB502_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0434747.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKIALAMIKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGMAKYNFIKFFIINTLASLAWAIVLGFTAYTFGYVIEAIFDKLSLY
                     PYAAPLFLLFLAGIIWLYLSKFSKK"
     gene            2621..3880
                     /locus_tag="SB502_001309"
     CDS             2621..3880
                     /locus_tag="SB502_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEG0434748.1"
                     /translation="MSLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKH
                     YLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQFLSLRIITHN
                     INFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLE
                     LRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIF
                     ALLLAYACLIGFVPSFVRSLIMAFWVFYLLCKNIKIINFVTLFCSILLCISLYPRLLF
                     SIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLPVLYFFPLISYQQI
                     LGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIA
                     SLISVRFKYLAFLCIFANFIPFIMIVI"
     gene            complement(3824..4630)
                     /locus_tag="SB502_001310"
     CDS             complement(3824..4630)
                     /locus_tag="SB502_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEG0434749.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
     gene            complement(4634..6016)
                     /locus_tag="SB502_001311"
     CDS             complement(4634..6016)
                     /locus_tag="SB502_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEG0434750.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIAQILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVKEAIDEDLRNLEYYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPTLLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(6019..6744)
                     /locus_tag="SB502_001312"
     CDS             complement(6019..6744)
                     /locus_tag="SB502_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HEG0434751.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSIFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDLR
                     QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPISVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            6866..8026
                     /locus_tag="SB502_001313"
     CDS             6866..8026
                     /locus_tag="SB502_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEG0434752.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKTKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            complement(8023..8226)
                     /locus_tag="SB502_001314"
     CDS             complement(8023..8226)
                     /locus_tag="SB502_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434753.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLHSLINAKDKALLSN"
     gene            complement(8228..>8421)
                     /locus_tag="SB502_001315"
     CDS             complement(8228..>8421)
                     /locus_tag="SB502_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEG0434754.1"
                     /translation="KEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFF
                     SYRRDKTTKRFVSVVYLKD"
BASE COUNT         3065 a         1329 c         1166 g         2861 t
ORIGIN      
        1 aacattcaaa actaaatttc aaacaagatt ataaaatatt taaagaatgt cttaaaataa
       61 taaagctatt taaagctaaa aatattttaa tttttattcc tttgcattat gaaccaaact
      121 taataaaatt tcgccatatt cttaataaaa attacaaact ttttgttcca tttatgcaag
      181 ataaaagttt aaaaattgta aaattaagat tgccttttat taaaaaaagg tttggggttt
      241 tagagcctat agattctttt tttaaagcaa aaattgattt agctattgtg cctgtaattg
      301 gcgtcgataa aaatttaaaa agaataggac atgggcaagg tttttatgat agattttttg
      361 aaaatttaaa ttacaaacct catataatat ttatccaaag tatagatgct ttaagtcaaa
      421 ataatctaac acaaaagcat gatatttcag gaaaattata cataaaccct tataaaaaat
      481 attacaagaa agaaagaaaa aatgatagaa tcacttatcg cacttatagc cgctatagtc
      541 ggactcggta taggatattt agttgcaaaa aaaatcaatg atgccaaata tgaaattttc
      601 gtagaacaag ccaaagctaa agccaaagct atagaatacg aagcggagct tattttaaaa
      661 gatgcaaaaa attcaattct taatgcagaa ttagaagtta aaaaaaaata cgaagaaaaa
      721 actcacaaat ttcaaaaaga ttttaatcaa aaatttgatg atctttctaa aaaagaacaa
      781 aaacttcagc aagaagaaga aaaactaaaa gaagataaag aatacctttg caagtcacaa
      841 aaacacattc aaaacttaca atctgatgtt gataaattaa aaaataaata tcaagaaaaa
      901 cttgacgatg ttttaaaaat tttagaacat tcgacaggac ttacacaaaa tgaagccaaa
      961 gaaatcattc ttaaaaaagt agaagaaaat tctcgcgagc aaattgcaca tatagtaaga
     1021 aaatatgaag aagaagcaaa aaatgaagct aaaagaaaag ctaatttcat cattgctcaa
     1081 gctacttctc gttttgcagg tgaatttgca gctgaaagac ttatcaatgt tattaacatt
     1141 aaaaacgatg aacttaaagg acgtatcatt ggtaaagaag ggcgcaatgt taaaaccttg
     1201 gaaatggttt taggtgttga tattatcatc gatgatacac caggtgctat tatagtaagt
     1261 tgttttaatc tttatcgccg tgctattgct acaaaagtta tagaactttt agttgaagat
     1321 ggcagaattc aacccgcgcg catagaagaa attcacgaaa aagtgtgtaa agaatttgat
     1381 agtgccattc tagaagaagg cgaaaccata gttatggatc taggtttaaa taaaatacac
     1441 cctgaaattg taaaactcat aggaaaactc aaataccgag caagctatgg acaaaacgct
     1501 ttagcacatt ctttggaagt ggctcacctt gcaggaatca ttgctgctga gtgtggtgga
     1561 gatgagaatt tagcacgtcg tgcgggaatt ttacatgata taggaaaagc attaacccat
     1621 gattttgaag gatctcatgt ggatttaggt gcagaacttt gcaaacgcta caaagagcat
     1681 cctgtagtaa tcaatgctat ttacgcacat catggacacg aagaagctac aagcatagaa
     1741 tcagcagctg tttgtgcagc agatacttta agtgctgcac gacctggagc tagaagagaa
     1801 gtgttagaag ctttcttaaa aagagtcagt gagctagaag atatcgctaa aagtaaagaa
     1861 ggaattaaaa atgcctatgc aatcaatgcc ggaagagaaa ttcgcgtcat agccaatgct
     1921 cagcttgtta atgatgatga aagtgtactt ttagctaagg aaatagcagc tgaaattcaa
     1981 gaaaaaatgc aatatcctgg tgaaattaaa gtcaatgtta tacgtgaact tagagctgta
     2041 gaatacgcta aataaggttt attatgcaag atatgattga tactttaata aaatatggtt
     2101 atattgtttt attcttttac tctttagggg gcgggatggt tggaatttta gctgcaggag
     2161 ttttaagttc tcaaggaaaa atggatctta gtttttgcat tgctcttgct tttattgcta
     2221 ataccatagg ttcaactttg ctttttatac ttggaaaata ttataaaaaa gacattatgc
     2281 cttattttaa aaaacaccga cgcaagatag cccttgctat gataaaaaca aaacaacatg
     2341 gaattatttt acttgtaact caaaaattta tttatggttt aaaaactttc attcccatag
     2401 ctgcaggtat ggcaaaatat aattttatta aattttttat tatcaatact ctagctagtt
     2461 tggcatgggc tattgttcta ggttttactg cttatacttt tgggtatgtt attgaagcaa
     2521 tttttgataa actgagttta tatccttatg ctgctccttt atttttatta tttttagccg
     2581 gaataatttg gctttattta agtaaatttt ctaaaaaata atgtctctat ggaattcttt
     2641 ttcttactct tttaaagaat ttcattattt atttttctct gttgttgtta tttttatttt
     2701 taatatcctt ttagaatata ataatttttt aaactttaaa aaccaaaaac attaccttat
     2761 agacaacgct ctattaacgc accaatatat aaaatataat aaaaaaaata aaaaatactg
     2821 ggttttaaag ttacaaactg aaaacttcac tttttatact acaagtttta aggatttaaa
     2881 tttaagcaag aatcaatttt taagccttag aattatcacc cataatatta actttaaaga
     2941 ctatctgagt aaaagttttt acgcaccttc ttatgatttt gaaaaattaa aagaaaaaga
     3001 atacaatccc attatatctt acttcttaaa tcaacataca aatgaaaaga ttaaagaatt
     3061 ttatggtgct ttattttttg cactgcccat atctttagag cttagaaacg atgtaaatta
     3121 ctacggtata gcacacctta tagcaattag cggttatcac ataggcttac tttttagttt
     3181 aattttcttt attttagctc caatttatag ttttttccaa aaaagatatt ttccttatag
     3241 aaatttacgt ttagatttaa gtattttaat ttttgcacta cttttagctt atgcttgttt
     3301 aataggattt gtcccttctt ttgtgcgctc cttgattatg gctttttggg ttttttatct
     3361 attgtgtaaa aatataaaaa tcattaattt cgttacgctt ttttgtagta ttttattgtg
     3421 catttctctt taccctagac ttttatttag tattggattt ttattttcta ttttaggtgt
     3481 tttttatatt tttttatata tgcatcattt tgcaaataaa tttaataatc ttataaatat
     3541 tattttgctt aatatttgga ctttttttgc tatggtttta cctgtgcttt atttttttcc
     3601 acttataagc taccaacaaa ttttaggtat tattttgagt ggaatttttg taatatttta
     3661 tcctttagta ttatttttgc atcttataaa ctatggagat ttgctcaatt ttatcttaga
     3721 tgaatttttt aaatttaaaa tttatggaac taatatccat atcccatttt ggatttttat
     3781 aagttatctt attgcttctt taatctctgt gcgatttaaa tatctagctt ttctttgtat
     3841 ttttgcgaat tttattccct tcattatgat tgtgatttag aaaataatag agtttaagcc
     3901 caaaaagata aataatccaa gaaatataaa tccaaataaa aaagaataaa atagtagaaa
     3961 aagatccata aacgctagcg tatgttttat tatataccac gtaatataca aataaatttt
     4021 ttcctatata ccaaatagta cccgctccaa aagatactaa agctaaactt ttaagagttc
     4081 ccttatgaac agaacttgaa taagatataa aaaataaacc ccaaataatt acaaagggta
     4141 aaatttcaaa aaaattaaac cctattttat aatcatctaa agtttgttgg ataaaacctg
     4201 aaatataaaa actaagccca agccccaaag gaacaagagt taaaagagtc caataagaac
     4261 taatactttg ccaaagtcct ttaggttcat ttttagtaat gcgattgatt acaaaatcat
     4321 agcctgaaaa aaaagctaaa gaagtaaatg ccatagcaat aagacctaca atacccaaat
     4381 ttacactatt ttttaaaaaa gtatcgatgt aggtagcaac aacatcttgt tgcgttggta
     4441 ttaaaaaagc aaaaattact tgctttgctt tttcataata agctttaaaa ctggaaattt
     4501 gcgtaaaaac agaaaaacat acaaataaaa taggtattaa agataataca gtataaaaac
     4561 taagcgctgc tgcataattt aaaatttcct tatcacgcaa atttagtaaa atagtaaaaa
     4621 aatttttcac cttctaaagt cccattttaa aaggatttag tatattattt ggatcaaaag
     4681 cttttttaat atttctcatt aaattcattt cggcttcaga aaaagctaaa ttcataaaag
     4741 gtgccttaga gagtccgata ccatgctctc cgcttaaagt tcctccaagt ttcactgtta
     4801 atttaaaaat ctcttccaca gcttcatagc cttttttcac ctgctcttta tcatttttat
     4861 caggaaccat aacattagta tgcacatttc catcccctgt atgtccaaag caaggaattt
     4921 taaaaccata ttttttagaa atctcatcta taccttcaag caaagtaggt agtttagaac
     4981 gcggaactgt aatatcttca ttaagtttta aagttccata catggcaatg ctttgagaac
     5041 aatttcttct agcaaaccaa atatctgcgg tttcttgttc atcttttgct attttaaatt
     5101 cgctagcgcc agcttctaaa aaataatatt ctaaatttct taaatcctca tcaatagcct
     5161 ctttaacatt accatccaca tcagcaatca aaatagctcc agcttctata ggcaaacctt
     5221 tattaaattt gctctcaacc gctctaatgc taagattgtc taaaaattcc atagatacag
     5281 gacttacacc gctagcaaga cttttgtaaa ccgcattcat agcacttttt acacttggaa
     5341 aaatagcaaa agcagttttt ttaaatttag gcaaaggtat taattttaaa gtaagctcac
     5401 ttaaaactgc caaagaacct tcactagcga ttaaaattcc tgccaaatta taacctgcta
     5461 catctttaat agtgcgtttc cctgcacgaa tgatttctcc gctaggcaaa acagccctta
     5521 aagccatcac ataatctttt gtaatgccat attttgcagc tctcattccc ccagcatttt
     5581 cgcttacatt accccctaag cttgaatact ccatgctagc agggtcaggt gggtaaaaaa
     5641 gtccatattt agccacttct ttttgtaaat gtatattaat aaccccaggt tgcacaacag
     5701 ccactaaatt ttcaagatca atttctaaaa ttttattcat atgcttttca aaagcaagca
     5761 ccaccccgcc attaacagct aaagctcctc ctgtaaaacc agatcctgag cctcgaggta
     5821 tgactatgat attattttca ttgcaaaatt ttaaaatttg agcaatatct tcttcatttc
     5881 ttggaaaaag aaccccatcg ggtaaataat gtttttttgt cgcatcatag ctataagctc
     5941 ttttgtgaat ttcatcaaaa taagcgtttt cttctcctaa aaatcgttta aaatattgtt
     6001 caaattcttt tttcatgttt attgcacctt aggaagatta atcaaagcat cataatatct
     6061 ataataattt cctatttctt gagagttaaa atcaaaaaaa ttacttttat atccacctat
     6121 acgagaataa aaaggaacct gaacgctaat tggtttgctt ataggcactt cataaagctt
     6181 attaaaatct tgacaatcca caacttctgc ttgattttcc aaagctacaa ccaaaatacc
     6241 aaccgcatta tcatcacaaa attgcctaag atctgaacgc ttaggagaaa gagtagccgt
     6301 tctaattaat tgtgctccaa aaatgtcaat atgggtaaaa tatatctgcg gaaattctct
     6361 aacaagttca ttataagttt gttcatcagg agcaattacc aatcctctat cataaagaaa
     6421 atttaaaaca acctcatcac ctactttagg taaaacattt ggcaaaggca aagcatcttg
     6481 cttaagagct gagaaaatgc taaattctaa ttttgccaaa ccattttttt tatctataac
     6541 acttgctcta gcgatgatac tttgcgaatt gctaaaatgt tgtactacta cgccacttga
     6601 ataaagtttt atatcatcac tatctttaat ataaccataa atatcatcaa cttttacaag
     6661 ttcacttttt ataggtttta aatcaaatcc aaccgcaaag aggctaaggt ttaaagctaa
     6721 aaaacacact atagttttaa acaaatttgc tccttaaata aaaatttata gaattataat
     6781 ccttttttgt taagcaattg taagaaaaat aaagtaaaat atagctttca aatttcaaaa
     6841 ttcttttaaa aattaaggtc atctcatgaa aaaattattg cttttattta tttttgttgt
     6901 tcaaagtttt gcagctttaa gtgttgaaga gctaacttgg gataatggag ataccttact
     6961 taaattctta caaagaaatt ccatacctat gtcactttat tatggacttg atagagaaga
     7021 tcaagaactt gcttctgata tagcctataa aataaaatat caagttttaa aagatgaaaa
     7081 caacaacata gaacaagttt taattccaat tagtgatgat ttacaaattc atatctataa
     7141 agataaagat ggacaataca ctcttgcttt tactcctgta tcttatcaaa aagaagatag
     7201 aattttacat ttaaccatta aaagttctgc ctatcaagat gtctatgagg aaagtggtag
     7261 cagtacttta gctcgtgcta tggttcgtgc ttttcgagga agtataaatt ttcgcaatat
     7321 ccaaaaaggt gatgaagtaa ccctatatta tgaacaaaaa agacgcatgg gtaaactttg
     7381 gggtgatata aatataaaaa tggcaatggt agaaatcaat aaaagcgcta gagaagtctt
     7441 ttcttataat gatatattct atgatcgcga tggtaaagaa ttagaatctt ttttacttac
     7501 aaaacctgtg aactacacta gaatttcctc tccttttaca acagcaagat atcatcctat
     7561 attaaaacgc tatcgtgctc atcttggtat agactatgct gcacctactg gaactcctgt
     7621 gaaaagtgct ggcaaaggag tagtaacctt tataggcaca aaaggtggtt atggaaatgt
     7681 aattcaaatc aagcatgact caggttatat gactttatat gctcatctta gtcgttttgc
     7741 aaaaattaaa aacggacaaa aggtaaatca aggacaagta attgcatatg ttggttcaac
     7801 aggtatgagc acaggtcctc atttgcattt tggagtatat ttaaataata aagctataaa
     7861 tcctgcatct gttgtaaaaa tcgccaaatc agaacttagt ggaaaaacga aagagaattt
     7921 taaacatatc atagctggat acgagcaggt tgttaaagaa gccctagcct cgaatcaacc
     7981 taatcctcca aaagaagaag attttgaaaa ctatatagaa ttttaattac tcaataacgc
     8041 tttatctttt gcattgatta aagaatgtag aagagttgca agctcttctt tttctttttc
     8101 attaatttca caaaaatctg catcaatcaa ttgtttcacc aaagcttcat ttaacaaatc
     8161 tccatcgcca aattctctag ctttttgaat gatttttaac acccttaaat cttttctttc
     8221 atacatttta atcctttaaa taaaccacac tcacaaaacg cttagtcgtt ttatcacgac
     8281 gataagaaaa aaaactctca tcatcaaagc tacaaattcc acaatcttta atattttcaa
     8341 tgcctaaatt ttgcgcttga aattttacta aagcttttaa atcaagttta tcatcttgaa
     8401 caaattcttt aaattctttt t
//
LOCUS       DARATF010000069         8317 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.069, whole genome shotgun sequence.
ACCESSION   DARATF010000069 DARATF010000000
VERSION     DARATF010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8317
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.069"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            65..445
                     /locus_tag="SB502_001316"
     CDS             65..445
                     /locus_tag="SB502_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434755.1"
                     /translation="MLIIGHKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDKLEN
                     FKKFYKLKIDGIILKDNIDNFPKN"
     gene            490..4002
                     /locus_tag="SB502_001317"
     CDS             490..4002
                     /locus_tag="SB502_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HEG0434756.1"
                     /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGS
                     EQLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSG
                     AFWMAFIFTFIMGAQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIVAILAGMALF
                     SLSFESLYSSMYNQTDEILKEVAPLGIVLILFSCIEVFFAWRLPKLKQTNKDLVFNKK
                     DYIRGKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFAKNELFIENTFYV
                     QISLAFSGIGVILGSLVAGKFSKNYIELGFIPLGALGMFLMAFLMPYFISLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFHAKENELGQILAGNNFFQNIAMLGFLLLATLFVKFEIN
                     VIYLFYFIALVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALL
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKEGNLVCLFPEGTLSRHGQLNEFKAGFELACECLSEDDGKIIPFYIRGLWGSA
                     FSRSDEEFSARNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHT
                     IARAWIDTAKKNLNQIAIIDTLAGDISYRKMLTLSLFLNFFIKRKSKELNINLQRGSY
                     APKEEAIGILLPASFASSLTNLSVLIAEKIAVNLNFTAGEKALKAAIKNAQISQIYTS
                     KTFLEKLANKGINLNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKSIF
                     TPSKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLEGIKSITFSDPTDALGVAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTTFEMKFKKSIFEGYGATETTPVASVNLPNHFDV
                     DYWLIHRANKEGSVGMPLPGTAVRIVDPNNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVVKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCATSLEDEKKGEQIVLLIECNNEIFEGVCEAIKNSNIPTLFKPRYYFQIE
                     KIPLLGSGKVDLKKVKELAKNLAI"
     gene            complement(4010..4921)
                     /locus_tag="SB502_001318"
     CDS             complement(4010..4921)
                     /locus_tag="SB502_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEG0434757.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGIFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVK
                     KILSFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTIVVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESAAPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFVSMPILIWTLL"
     gene            complement(5118..5203)
                     /locus_tag="SB502_001319"
     tRNA            complement(5118..5203)
                     /locus_tag="SB502_001319"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5167..5169),aa:Leu,seq:gag)
     gene            complement(5238..5576)
                     /locus_tag="SB502_001320"
     CDS             complement(5238..5576)
                     /locus_tag="SB502_001320"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEG0434758.1"
                     /translation="MKKVLFLLLACTAVAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            5809..7143
                     /locus_tag="SB502_001321"
     CDS             5809..7143
                     /locus_tag="SB502_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0434759.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFISEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAISKDGFIMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFTFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSVSSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFKPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            7156..>8317
                     /locus_tag="SB502_001322"
     CDS             7156..>8317
                     /locus_tag="SB502_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0434760.1"
                     /translation="MRTYFSKIGFVLAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFILSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNVITTNLTSSVFFFTLSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFSHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGAGIVFVSLMSLFNQLGALGYIFAFCFFLALFFAGITSAISMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFL"
BASE COUNT         2728 a         1050 c         1392 g         3147 t
ORIGIN      
        1 ttgcttggta acaattttat aagtataatt tacaaaataa taaaaaatag agctaaggaa
       61 aaaaatgctt attattggac ataaattatt aaaaaattta gatttttctt ttattgaaag
      121 tgttgaagaa gttaaagata ataaagttta ttgtattgtt tatgatgaaa aattgatttc
      181 ttatttaagt caaaatgatt ttgaatttgc tattttagtt caaaataaag atgagatatt
      241 tttagccaat gctttaggag ctaagttttt gctttgtaat gataaaaaac ttgcaaaatt
      301 tgctagtaag gttgcagaat tttatgtttt tgatagtagg gttttaatga ttgttgataa
      361 attagagaat tttaaaaaat tttataaatt aaaaatcgat ggaattattt taaaagataa
      421 tatagataat tttcctaaaa actgataaat tcttttgtaa aataagcgct aattgacgag
      481 gtttaaataa tgcaaaaaaa atcttttttg aaaatttacg gattaattcc ttttttactt
      541 atagcattca tcaatgcttt tgtggatttg ggacataaaa ttattattca aaatactatt
      601 tataaggcct atgaaggaag tgagcagtta tttttaaatg ctatagttaa tgctttgatt
      661 ttacttcctt ttattcttat gctttctcct tcgggttttt tagcggataa atatccaaaa
      721 aatattgtaa tgaaaatttc agcaattttc aatgttatac tcactttaat aatttgcatt
      781 tgttactata gcggtgcttt ttggatggct tttattttta cttttataat gggagcacaa
      841 gcagcgattt attcaccaag taaatacggt tttattaaag aactcgtggg aaaagacttt
      901 cttgctatgg gtaatggtgt aattaatgcg gtaagcattg tggcaatctt agcgggaatg
      961 gctttatttt ctttaagctt tgaaagtctt tatagttcta tgtataatca aacagatgaa
     1021 attttaaaag aagtagcgcc tttaggaatt gtgctaattt tattttcttg tatcgaagta
     1081 ttttttgcgt ggcgtttacc taagctcaaa caaacaaata aagatttagt ttttaataaa
     1141 aaagactata ttcgtggaaa acttctaata aataatctta agcttgtttt taaaaataaa
     1201 actatttggc tttgtataat tggaatttca tttttttggg ctatatctca actttatctt
     1261 gtcagctttc ctgtctttgc taaaaatgaa cttttcatag aaaatacttt ttatgtgcaa
     1321 atttcactcg ctttttctgg tataggagtg attttaggct ctttagtagc tggtaaattt
     1381 tcaaaaaatt atatagaact tggatttatt ccacttggtg cattgggtat gtttttaatg
     1441 gcttttttaa tgccttattt tataagttta ttaagttata gttttttatt tttctttttt
     1501 ggattttgcg gagccctttt tatcattcct ttaaatactt taatccaatt tcatgctaaa
     1561 gaaaatgaat taggacaaat tcttgcagga aataattttt ttcaaaatat tgccatgttg
     1621 ggatttttgc tcttggcaac tttatttgta aaatttgaaa tcaatgtgat ttatttgttt
     1681 tattttattg ctttggtaac ctttatagga agtttttaca tacttttaaa actccccttt
     1741 tctttagtgc gtatactttt aagcatagct tttttacaac gataccgttt acttgtggaa
     1801 ggttttgaaa atataccaga aaaaggtgga gctttacttt tgggtaatca tatttctttt
     1861 attgattggg ctgttgtaca aatggcaatt ccaagaaaaa tttattttgt tatggaaaga
     1921 agtatttatt ctaaatggta tattaaaatt tttcttgata aatttggtat tattcctgta
     1981 tcaagtacag gaagtaagac gagtttagaa ctgatagcaa agcatattaa agaaggtaat
     2041 ttagtttgct tatttcctga aggtacactt tcgcgacatg ggcaattaaa tgaatttaaa
     2101 gcaggatttg aattagcttg tgaatgttta agtgaagatg atggaaaaat tattcctttt
     2161 tatataagag ggctttgggg tagcgctttt tcaagaagtg atgaagaatt ttcagcaaga
     2221 aaccgcactt taaataaaag aaaaattgct atagcttttg gtaaagctat gcctttgcat
     2281 tctaaaaaag atgaagttaa agctaaagtt tttgaacttt cttttatggc ttggaaatca
     2341 caatgcgaag ctatgcatac tatagcaaga gcttggatag atacagctaa aaaaaatcta
     2401 aatcaaatag ctattatcga tacactagct ggagatattt cttatagaaa aatgttgact
     2461 cttagtttat ttcttaattt ttttattaaa agaaaatcca aagagttaaa cattaacctt
     2521 cagcgtggaa gttacgctcc taaagaggaa gctataggaa ttttactacc tgcttctttt
     2581 gcaagttctt taaccaatct atctgtttta atcgcagaaa aaattgcagt aaatcttaat
     2641 ttcactgctg gagaaaaagc tctaaaagca gctataaaaa atgcgcaaat ttcacaaatt
     2701 tatacttcta aaactttttt agaaaaatta gcaaataaag gtataaacct aaatttcgat
     2761 acaaatatac atttaattta ttttgaagat attgtagaag attttaaaat gcaaaaaact
     2821 aaaattttta gcatgatgct agcagttagt attataccta gttttatact caaaagcatc
     2881 ttcactcctt caaaaaacaa tcttgccatc gcagctattt tatttagtag tggaagtgaa
     2941 ggttctccaa aaggtgttat gctcaataac cgtaatattt taagcaatat agcacaaatt
     3001 tctgatgtgc tttgcacaag aaataatgat gtcattctct catctttacc accttttcat
     3061 gcttttggac ttaccgtaac tacatttttg cctttgcttg aaggtattaa aagcatcact
     3121 ttttcagatc caaccgatgc cttaggggtt gccaaagctg ttgctaaaaa taatgtcact
     3181 attatgtgtg gaacttcaac ctttttagga atttatgcaa gaaataaaaa gcttgatgct
     3241 ttaatgtttg aaagtttaag aatagttgta tcgggcgctg aaaaactaaa aaatgaagta
     3301 agaactactt ttgaaatgaa gtttaaaaaa agcatttttg aaggttacgg ggctacggaa
     3361 accacgcctg tggcgagtgt aaatttacca aatcattttg atgtggatta ttggcttata
     3421 catcgtgcca ataaagaagg aagcgtagga atgcctctac ctggaactgc ggtacgtatt
     3481 gttgatccaa ataattatga aaatttaaaa acaaatgaag atggactcat acttataggc
     3541 ggtcatcaag ttatggtagg ctatcttaat gacaaagaaa aaaccgatga agtggttaaa
     3601 gaaattgatg gcataagatg gtacaacacg ggagataagg gacatttgga tgaagatggt
     3661 tttttatata ttgtcgatcg ttattctcgc tttgcaaaaa ttggcggaga gatgatttct
     3721 ttgggtgcaa tagaagaaga aattgccaaa tttatagaca ctgaagtggt taaattttgt
     3781 gccacatctt tagaagatga gaaaaaaggg gaacaaattg ttttactcat agaatgcaat
     3841 aatgaaattt ttgaaggagt atgtgaggct ataaaaaatt ctaatatacc tacacttttt
     3901 aaacctagat attattttca aatagaaaaa attcccctcc taggttcagg aaaagttgat
     3961 cttaaaaaag ttaaagaatt agctaaaaat ttagccatat aatttgagct tataacaaag
     4021 tccaaattaa aattggcata gaaacaaaag caaaaagaac tccaaaggct acagcactta
     4081 cggctaaatt actatctagt ttagctttca ttaccatagc tcctgctaaa gtcatagtag
     4141 gagctgcact ttctataata gcaacgatgg tagaatcttt taattccaaa ttaaatattt
     4201 ttaaacaaaa tacaaaaaat aaaggagcta aaatcatttt agcaaagatg acaactattg
     4261 taggtttgta agaggtttta atcgccataa agccaagtcc taaacctata gcaaaaagtg
     4321 caacaggggt tgcagaggca ccaaataaac gaataggaga gaaaataaat tcaggtaaag
     4381 taatcaattt acacaaaaaa ccaaaaagca aagctaaaaa aggtggaaaa ctaagaattt
     4441 ttttaacatt agcaagcaaa ctgacttttt ctccatttcc caaagaaagt ataaaaggtc
     4501 caaaaagtga tataggtaaa gttgtggcta aagcatcgta aaatataact tcagcgctaa
     4561 attgtgggtc attaaatata ccagcaacaa taggcatacc cacaaatata gtatttccaa
     4621 aacaagaaag caaaaacata ctgactaaag ttactttaga aaaatgaaaa acttttccaa
     4681 taagaatagc aaaaaaagct gctagtatac agctaaacaa tccaataaaa ataaaaataa
     4741 tcaatgaaaa atcaaaattt aaatgatatg ctttatcgaa aatcaaacaa ggtaaagcaa
     4801 aaataatagc aaaatctaaa aaagtcctag cttgtttttg ctttaaaacg ccaattcttt
     4861 tggcaaaata tccgcctgca agtaaaataa aaattgtaaa taatggtata aaaacaaaca
     4921 ttgaataatc ctttttaagg gatggttttt gaaaacggat agaattatat tctttatact
     4981 taaaaaaaat cttaatattt tttaagtttt ttaaaaaaac caatattttt tattttttgt
     5041 aactttaaga aattgtaagt tgaaatttga ttttgaatag ttagtatttt aagttgaatg
     5101 attataattt taaataatgg tgcggttagc gagatttgaa ctcgcacacg cggagcgcac
     5161 caccccctca agatggcgtg tctaccaatt ccaccataac cgcatagaaa aaagcccaaa
     5221 aagggctttg ataagtttta ttgtaaaact ataaaaggat ttgcgtaaag tgctattagc
     5281 gcgataacaa gagcatagat aacttgtgct tcaatcatcg ctaaagcgat aaacatagtt
     5341 gtcattaatt ttggcccaag accagggttt ctagctgttc ctgcaattgt tgccgctgca
     5401 gtattaccca taccgatagc accaccaagt gctgcaacac caagacctaa gcctgctgca
     5461 agaactgaaa atgctttaat ccatacatta atagcttctt gctctactgg agcattagtt
     5521 tcagctgcaa aagctactgc tgtacatgct aataataaaa aaagaacttt tttcattatc
     5581 ttaacctttc tataaaaaaa tttttttcaa tttttaaatc agttcggctt gcgtatccct
     5641 acttaagact taaaaataaa ttcgaattat aaccaaaagt atctttattt ttattgaaat
     5701 ttacaaaaat tcacattttt gatttaaatt tgattgtttt caataaagct taaaagtttt
     5761 tttgctttaa taatatttta aaataatttt taagtcaagg ttgtaacatt gagttctaaa
     5821 ttttcaaaaa taggtttcat tttagcggta gcaggttcag cggtgggctt gggtaatgct
     5881 tggaaatttc caacactagt aggtcaaagt ggtggatctg cttttatctt gctttatata
     5941 attcttactt taggtgtagg ttttgtgata tttttagctg agcttagcat aggaaaaatt
     6001 agtgaaaaag atccggttaa tgcctatgaa aagttagcac cttcaaataa aaaagcttgg
     6061 tcttatgttg gttttactat ggtgggggcg attttaatag tttcttttta taccttggtg
     6121 attggctgga tagttaaata tgtgttttta agtatcactg gaaatttgcc tatggatcta
     6181 gaagtaagta aagcacagtt tggatttttt ataagtgagg attttttaag tcagtttatt
     6241 tgttttactt tggttttttt atgtgttttt tatattgttt ctaaaggtgt taagaatggg
     6301 attgaaaagt taaatgtttg gatgatgcct tcattgttta ttttgcttat tttgatgctt
     6361 gtttatgcta ttagcaaaga tggttttata atggcggtta aatttctttt tgtacctgat
     6421 ttttccaaaa tcaacacttc aaatgttctt gaagccttag gacttgcttt ttttagtctt
     6481 tctttgggcg ttggaacgat tattacttat tctgctagtc tgcctgataa aaccaatttt
     6541 attaccagta ctttaaatat tatttttatc aatcttttag ttggtttatt aatgggtttg
     6601 gttgttttta cttttatctt tgagtttggt tacaatccta atcagcaagg accaggactt
     6661 gtttttattt ccttagctac tttatttgaa aaaattggag tgattggttg tatttttgga
     6721 gcagcgtttt ttatttcttt aatctttgct ggtattactt cagctgtttc aatgatagag
     6781 cctttcactt tttaccttat taatactttt ggtatgagcc gtaaaaaagc tttgatttta
     6841 ataggaattg ttgtttatat tttaggaatg ttgtgtattt tatcttcttt aaaaagtact
     6901 cagtttggat tttttggaat gagttttttt gatttgcttg atagtgtttc aagcaaggtt
     6961 attatgcctt taggtggaat tttggcagct atttttgtgg gatttgtgat gaaaaaagaa
     7021 gctttaaaaa ttttatttaa accttatatg aggggtatat tttttgaact ttggtatgtg
     7081 tttttgagat ttatttcccc tttggctgtt gttatagtta tgatagccgc ttttttaaag
     7141 tgagtttgaa aaataatgag aacatatttt tcaaaaatcg gttttgtatt ggctgttgct
     7201 ggtggagccg ttggtttagg taatgcttgg aaatttccaa ctttaagcgc agaaaatggt
     7261 ggttttgttt ttgtgctttt atatttgttt tttactttaa ctataggatt tagtattttt
     7321 ttggctgaag tggctatggg acgtttaagt aaaagtgatc ttgcaaatgc ttattcaaat
     7381 cttgccataa aatatggcaa tagatggcga tatggcggcg tttttatgtt aggtggtatt
     7441 tttatcctct ctttttatct agttatcatg ggatgggttt taaaatatac tgtagtgagt
     7501 ctttattatc ttcctaaaac tttagatgaa gcagcaagta attttcagaa tgtaattact
     7561 acaaatttga caagttctgt ttttttcttc actttatctt tttttcttac tttattgata
     7621 gtatctaaag gtttaatcaa agggattgaa aaattaaacg ttgttataat gcctagctta
     7681 tttttaatgc ttgtttttat gttgttttat tgcatgggat ttaagcaagg ttttgcaaat
     7741 gctttttctt atttatttta tcccgatttt tcacatttta aattcagctc tattgccgaa
     7801 gctttagggc ttgcattttt taccttatgc ttgggaatag gttgtatagt tacatattca
     7861 tcggccttgg ataaaaaaac aaattttata aaaagttcag tgtatattgt tttgattaat
     7921 ttattgattt cttttattat gggacttatt gtttttactt ttatctttga atttggagcc
     7981 gatccgcata ctcaaggagc aggaattgtt tttgtatcct tgatgagttt gtttaatcaa
     8041 cttggagctt taggctatat ttttgcattt tgttttttct tagcactttt ttttgctggt
     8101 attacttcag ctatttcaat gatagagcct ttaacttttt atatgattaa taactatcaa
     8161 atttctcgtg ttaaagctct atttttaata ggtttatttg tttttgtttt tggaatttgt
     8221 tgtatcttgt cattaaattt aaattttttt tctatgttta gtttttttgg caaagatttt
     8281 tttactttat tagataaatt aacttcaaat tttttac
//
LOCUS       DARATF010000070         7986 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.070, whole genome shotgun sequence.
ACCESSION   DARATF010000070 DARATF010000000
VERSION     DARATF010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7986
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.070"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            12..380
                     /locus_tag="SB502_001323"
     CDS             12..380
                     /locus_tag="SB502_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEG0434761.1"
                     /translation="MVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKKPNSALR
                     KVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVA
                     KRTVSRSKYGAKRPKAGAAK"
     gene            450..920
                     /gene="rpsG"
                     /locus_tag="SB502_001324"
     CDS             450..920
                     /gene="rpsG"
                     /locus_tag="SB502_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEG0434762.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            933..3008
                     /gene="fusA"
                     /locus_tag="SB502_001325"
     CDS             933..3008
                     /gene="fusA"
                     /locus_tag="SB502_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEG0434763.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLVSEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            3037..3113
                     /locus_tag="SB502_001326"
     tRNA            3037..3113
                     /locus_tag="SB502_001326"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3071..3073,aa:Arg,seq:cct)
     gene            3131..3280
                     /locus_tag="SB502_001327"
     CDS             3131..3280
                     /locus_tag="SB502_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434764.1"
                     /translation="MIKIAFFITFVISFLTAQSPVNFKEDNNITKEQNIFKEQPPKRI
                     KIPTH"
     gene            3286..3987
                     /locus_tag="SB502_001328"
     CDS             3286..3987
                     /locus_tag="SB502_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEG0434765.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILANFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIELIEKNLKSNQIQGDIFHDDFNQFQSIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLTKANSMLKPNGTLYFCYEALALDE
                     ICFILKDMKIKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            3977..4351
                     /locus_tag="SB502_001329"
     CDS             3977..4351
                     /locus_tag="SB502_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEG0434766.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEALRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVEFEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLS"
     gene            4324..5601
                     /locus_tag="SB502_001330"
     CDS             4324..5601
                     /locus_tag="SB502_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HEG0434767.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLTLANNLDKQAELNNLAKPYLNQN
                     DNLKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFVLALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCKQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACIKP"
     gene            5598..6374
                     /gene="trpC"
                     /locus_tag="SB502_001331"
     CDS             5598..6374
                     /gene="trpC"
                     /locus_tag="SB502_001331"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEG0434768.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            6384..6869
                     /locus_tag="SB502_001332"
     CDS             6384..6869
                     /locus_tag="SB502_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEG0434769.1"
                     /translation="MQYLYAPWRSEYFEKEKSICPFCDCANKIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYIHEEHIENLSDEIWQEMSYFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWSGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            6859..7857
                     /gene="mnmH"
                     /locus_tag="SB502_001333"
     CDS             6859..7857
                     /gene="mnmH"
                     /locus_tag="SB502_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HEG0434770.1"
                     /translation="MLSEVEFVEFQKENFSFLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKAMGASYICQNTAKHILEITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
                     AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKEELLDHFKAQLLF"
BASE COUNT         2859 a         1039 c         1546 g         2542 t
ORIGIN      
        1 ccataaatca attggttaga aaagagcgca aaaaagtttt agaaaaatct aaatctccag
       61 cgcttaaaaa ttgtccacaa agaaggggag tttgcactag ggtttatact acaacaccta
      121 aaaaaccaaa ctcagcgtta agaaaagttg ccaaagtaag acttactagt ggctttgaag
      181 tgatcagcta tatcggcggt gaaggtcata acttgcaaga acacagcatt gttttagtgc
      241 gtggtggtag ggtaaaagac ttaccagggg ttaaatatca catcgttcgt ggtgctcttg
      301 atacagcagg tgttgcaaaa agaacagttt ctcgttctaa atatggtgct aaacgtccta
      361 aagcaggcgc tgcaaaataa tcattcatac agacaaatcc gttagatttg attttgtttg
      421 agtaaaattt aaaatttgaa ggaaaaataa tgagaagaag aaaagctccg gtaagagaag
      481 tcttgcctga tccgatttat ggtaataaag taatcacaaa atttattaat tctttaatgt
      541 atgatggtaa aaaaagcaca gctacaacaa ttatgtatgg tgctttggaa gctattgata
      601 aaaaaggtgg cgagaaaaaa ggtattgata tttttaatga tgcgattgaa aatattaagc
      661 ctttattaga agtaaaatct cgtcgtgtag gtggtgcaac ttatcaagtt ccagttgaag
      721 ttcgtcctgc tagacaacaa gctttggcga ttcgttggat tatttctttt gcaagaaaaa
      781 gaagcgaaag aactatgatt gataaacttg cagctgagct tttagatgca gcaaatagca
      841 aaggtgcttc atttaagaag aaagaagata cttataaaat ggctgaagca aataaagcat
      901 ttgctcacta tcgttggtaa gaaggagtgt gtatgtcaag aagtactcct ttaaaaaaag
      961 ttagaaatat cggtattgct gctcacattg atgcgggtaa aacgactaca tctgaaagaa
     1021 ttcttttctt tacaggcatg agtcataaaa tcggtgaagt tcatgatggt gctgcaacta
     1081 tggactggat ggaacaagag aaagagcgcg ggattactat cacttctgcg gctacaactt
     1141 gtttttggaa agatcatcaa atcaatctta ttgacactcc aggccacgtg gattttacaa
     1201 ttgaagttga aagatctatg cgtgttcttg atggtgctgt tgcggtattt tgttcagtgg
     1261 gtggggtgca gcctcaaagt gaaacagttt ggagacaagc aaataaatat ggtgttccaa
     1321 gaatagtatt tgtaaacaaa atggatagaa tcggtgcaaa tttctacaat gtagaagatc
     1381 aaattcgcaa ccgtttaaaa gctaatccag ttccacttca aattccaatc ggtgctgagg
     1441 ataattttaa aggcgtaatc gatcttgtaa ctatgaaagc tttagtttgg gaagatgata
     1501 ctaagccaac ggattatgta gaaaaagaaa ttccagctga acttaaagaa aaggcagaag
     1561 aatatcgcac aaaaatgata gaagcagttt ctgaaacttc agatgagttg atggaaaaat
     1621 atttaggcgg agaagaatta agccttgaag agattaaaac agggattaaa gcaggatgtt
     1681 taagtctttc tatcgttcct atgctttgcg gtacagcgtt taaaaataaa ggggttcaac
     1741 ctttacttga tgctgttgtg gcttatttac cagctcctga tgaagtggca aatatcaagg
     1801 gtgaatatga agatggcaca gaagtttctg taaaatcaac tgatgatggc gagtttgcag
     1861 gacttgcatt taaaattatg acagatccat ttgtaggaca acttactttc gtgcgtgttt
     1921 atcgcggttg tttagaaagt ggttcttatg cttataactc aactaaagat aaaaaagaaa
     1981 gaattggtcg tttgttaaaa atgcactcta acaaaagaga agagattaaa gtgctttacg
     2041 caggcgaaat tggtgctgtt gtaggactta aagatacttt aacaggggat actcttgtaa
     2101 gtgaaaaaga taaggtaatc cttgaaagaa tggattttcc agatccagtt atttctgttg
     2161 cagttgagcc aaaaactaaa gcagatcaag aaaaaatgtc tattgcttta aataaattag
     2221 cacaagaaga tccaagtttt agagtttcta cagatgaaga aagtggccaa actatcattt
     2281 caggtatggg tgagttacac cttgaaatta tcgttgatag aatgcttcgt gaatttaaag
     2341 ttgaagctga agtaggtcaa ccacaagttg cttatcgcga aactattaga aaaactgttg
     2401 aacaagaata caaatacgct aaacaatcag gtggtcgtgg tcagtatgga catgtattct
     2461 tacgccttga accacttgag ccaggtagtg gatatgaatt tgttaatgat atcaaaggtg
     2521 gagtaattcc aaaagaatac attcctgcag ttgataaagg tgttcaagaa gcattacaaa
     2581 atggtgtttt agcaggttat cctgtggaag atgttaaagt aactgtttat gatggaagtt
     2641 atcacgaggt ggattcatct gagatggcgt ttaaacttgc tgcttctatg ggctttaaag
     2701 aaggtgctag aaaagcaggt gctgtgatct tagagcctat gatgaaagtt gaagtagaaa
     2761 ctcctgaaga ttacatgggt gatgttattg gagatcttaa caaacgccgt ggtcaagtaa
     2821 atagcatgga tgagcgtggt ggaaataaaa tcatcacagc attttgtcct ttggctgaaa
     2881 tgtttggtta ttctactgat cttagaagtc aaactcaagg tcgtgcgact tattctatgg
     2941 aatttgatca ctatgatgaa gttcctaaaa atgttgcgga tgaaatcatc aaaaaaagaa
     3001 acggttaaat ttttagcggg atttttcccg ctttctgtcc tcgtagctca gcaggataga
     3061 gcgcaaaatt cctaattttg aggccgtgag ttcgaatctc gccgtggaca ccattttatg
     3121 aggtgttatt atgataaaaa ttgctttttt tataactttt gtaatttctt ttttgacagc
     3181 acaaagccca gtaaatttta aagaagataa taatataaca aaagaacaaa atatatttaa
     3241 agaacaacct ccaaaacgca ttaaaattcc aacgcattaa aatatatgtc agatttgatt
     3301 acgctagcac aattatcaca agggtatcgt tacaatagtg attctttaat tttagctaat
     3361 tttattttaa aacaaggaat taaaggcgct gtttttgatg taggtgcggg ctgtggtatc
     3421 ataggtattt tacttaaaaa aaatattgca aatttaagtt tatctttgat tgatattcaa
     3481 aaagaaaata tagaattgat tgaaaaaaat ttaaaatcca accaaataca aggcgatatt
     3541 tttcatgatg atttcaatca atttcaaagc ataaaaaaat ttgacttcat agtttgcaat
     3601 cctccatttt atagacaagg agcttacaag agtgaagatc agcataaagc tataagtaaa
     3661 tttcaggaat ttttaccctt gcatagcttt ttaactaaag caaattctat gcttaagcca
     3721 aatggtactt tgtatttttg ctatgaagct ttagctttgg atgaaatttg ttttatttta
     3781 aaagatatga aaataaaaat aacaaagctt tgctttgtac atacacatca aaacaaaaaa
     3841 gcaagacttg ttttgataca ggtaaaaaaa ggttcaaaat cgccttgtga gattttacct
     3901 cctttttttg tatatgaaaa tgaaatttta agcaaacaaa tgcaagaaat tcacttaaga
     3961 tttaggttaa aaagttatga tatttgataa aaatttttct tatgcttttg atgaaaatgc
     4021 ttgtgagaaa tgcggtggaa agtgttgcac tggagaaagt ggcaatattt ttgcgagcaa
     4081 ggaagaatta gaagcattaa gaaagcattt aaatttagaa agcaaagaat ttgctgaaaa
     4141 atacttgaga aaagtgggct ttaaaatgag ttttaaggaa gtcgaatttg aagatggttt
     4201 tgcttgcatt ttttttgata ctcaaaaaag aaattgcagt atctacgatt ttcgtccaaa
     4261 acaatgcaga acttttccat tttgggaata ttttaaaaca catcaaaagg aattagaaaa
     4321 agaatgtata ggtatttgtt atttgtctta gcagcctttt ttttggcagc ttgtggaagt
     4381 tcaaaaatca atgttgttta tcctgattat acaaaatata aaagcaatga ttttgattta
     4441 agggttatga aggcttataa ttatgagtat tataaacaat acaaagaagc cagagatgaa
     4501 tttttaagtc tttatcaaga ttataataat actaattttt tagaaaatgc atttttactt
     4561 actttagcaa acaatcttga caagcaagca gagttaaata atctagcaaa gccttattta
     4621 aatcaaaatg acaatcttaa gcgacttagt gctctttatg ctttaaattc aaatgatatc
     4681 aacaatgctc aaaaacttat gaaagagctt ttaacaaaaa aggatagtga tcctagaaat
     4741 ttagagcttt acggggatat tttggttaaa aaaaatgatt taaaaaatgc tacaaaatac
     4801 tatagatctg cttataatca agtgcaaaat gaagaaattt tatttaaact cataggaatt
     4861 tatgcgattt tgaatgatac tttaaatatt aaaaatgttt tagaattttc aagaaaaacc
     4921 aatggttgca ctctcaaaac ttgcgtcttg cttgctaaaa tttattttga tgaaaaaaat
     4981 atcgaagctt taaaaagtat atataaagag ctttatcaac ttaccaaaaa taaaagtttt
     5041 gtattggctt tagttgagct tttaaattct caaggcaaaa cagaagaagc tttaaaaatt
     5101 tctttgcagt atgatttaga tgatgacatt aaactcgctt tgtatcagaa tttaaaacgc
     5161 tttgatgatg ctaaaaaaat gagtttagct ctttatcata aaacaaaaaa taaagaatat
     5221 cttctacgag cggcagtttt tgaatttgaa gctgcaaatg aagctaaaaa aatcactcca
     5281 aaagtaattg attctgtaaa agaaaaattc gaacaggcta tcgataaaga tagcaatgct
     5341 ttgtatttaa actactatgg atatttgctt atagattatg atttagatgt taaaaaaggt
     5401 atagagcttg tgaaacttgc cttagaaaaa gatccacaga atttgtatta tttagattct
     5461 ttagcttggg ggtattataa actaggcgat tgtaagcaag catgggaaat tttaaaacaa
     5521 acattagatg ataaagaatt tgcaaattct gatgagagca aagctcatat aaaagcgata
     5581 aaggcgtgta taaaaccatg atattggata aaatttttga aaaaacaaaa gaagatttaa
     5641 aagaacgcaa actaaaactt ccttatgata tgttagggcg ttctttagct tcaaatcctt
     5701 tctttccaaa agatgtgatt aaggctttaa aaagagtaga aaaagaagtt aaaatcatag
     5761 cagaagtaaa aaaagcaagc cctagcaagg gagtcattag agaagacttt gatcctttga
     5821 gtatcgcttt aaattatgag aagaacaaag ctgcggcgat ttctgtttta actgagccgc
     5881 atttttttaa aggttcttta gaatacttaa gtcttatacg ccgttatacg caaattcctt
     5941 tacttagaaa agattttatc tttgatgagt atcaaatttt agaagctttg gtttatgggg
     6001 cggattttgt attattaatc gctaaaatgc taagcatgaa agagcttaaa aaactgcttg
     6061 agtttgcaag acatttaggt cttgaggctt tggttgaaat tcatgataaa gaggatttga
     6121 gtaaggctat ttttgctgga gcggatatca ttggtatcaa tcatcgtaat ttagaggatt
     6181 ttactatgga tatgagtttg tgcgaaaaac ttatcccaca aatcccaaat tcaaaaatca
     6241 tcatcgcaga aagtggttta gaaaataaag aatttttaga gcatttgcaa aatttaggcg
     6301 ttgatgcttt tttaatcggc gaatatttta tgcgcgaaaa agatgaagga aaggctttaa
     6361 aagctttgct ttaaggaggg aaaatgcagt atttgtatgc accatggcgg agtgagtatt
     6421 ttgaaaaaga aaaaagcatt tgtccatttt gtgattgtgc taataagatc aaaagcgatg
     6481 aagaattagg cgtgattttt agagcaaagc attgttttgg agtgatgaac cgctatcctt
     6541 attctgcagg gcattttatg gtgattcctt atatacatga agagcatata gaaaatttaa
     6601 gtgatgaaat ttggcaagaa atgagttatt ttgtgcgttt gggggtaaaa attttaaaag
     6661 agcaaattca tgcaaatgga gtgaatatcg gtatgaattt aagcaaggat gcaggagctg
     6721 gcatagcttt tcattgtcat tatcatctag tgccacgctg gtcaggagat acaaatttta
     6781 tcacaaccat aggagaaact agggtttgtg gcactaatat agagcaagtt tatcaaaaac
     6841 ttgttttggc ttttaaaaat gctcagtgaa gttgaatttg tagagtttca aaaagaaaat
     6901 ttctcttttt taatcgatgc aagaagccct agagaatttt tgcattctca cttgatagga
     6961 gctttaaatt tttatgcact caatgatgaa gaatatcaag aaataggaac aatttataag
     7021 aaaaatcaag ctttagctaa ggctatgggt gcgagttata tttgtcaaaa taccgctaag
     7081 catatattag aaatcactca aaattttcgc ataggagaaa aggtggggat ttattgttct
     7141 cgtgggggtt tgcgttcaaa gtctatcgca gtgattttaa gtgagcttgg ctttagggtg
     7201 gtgcgtttaa aaggtgggtt taaagcttat agaacttttg taacgcatta tttcgaaaat
     7261 gaaataaatt ttgatttttt tgctctttgt ggtaatacag gttgtggaaa aacagagctt
     7321 ttagaacaac tcccacaagc tataaattta gaaaaaatgg caaatcattt aggctcgtct
     7381 tttggtgata ttttaggaaa acaacctacg caaaaagctt ttgaagcaga actttttcac
     7441 aatattcaaa atttagaaaa ttttgctttc atagaaagcg aaagtcgcaa aataggggat
     7501 attatcttac ctttgaaatt ttatgaaaaa atgcaaaagg cttttaaaat ttattgtttt
     7561 tgttctttgg aaaatcgcgt tagaagaata caaaaaattt atcaagaaaa aatgactcct
     7621 ttgaaatttc aacaatgtgt gcaaaaaatc agtccttata tcagcttaaa tttacgccaa
     7681 gatttgcttc aaagttatga gagaaaagaa tggcaaaagc ttattgttat gcttttggag
     7741 tattatgata aaacttataa aaaaccagat aagattgatc ttgagttaaa tactgatgat
     7801 attttaaaag ctaaagaaga gcttttagat cattttaaag cacaattact tttttaatat
     7861 cagataattt tattaaataa tcaaattttt tcttcattat cttgtaataa tcctttttat
     7921 ctttgttgtt ttttaacttg gctcaaattt ttattttaat gctagtaatt ttgaattata
     7981 gagaag
//
LOCUS       DARATF010000071         7862 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.071, whole genome shotgun sequence.
ACCESSION   DARATF010000071 DARATF010000000
VERSION     DARATF010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7862
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.071"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(100..1350)
                     /locus_tag="SB502_001334"
     CDS             complement(100..1350)
                     /locus_tag="SB502_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEG0434771.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQTHDKGKNYFDSFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPTNK
                     SQELAKKIIECLNEEGYFEYDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKLYELEG"
     gene            complement(1350..2078)
                     /gene="lptB"
                     /locus_tag="SB502_001335"
     CDS             complement(1350..2078)
                     /gene="lptB"
                     /locus_tag="SB502_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEG0434772.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(2071..2478)
                     /gene="tsaE"
                     /locus_tag="SB502_001336"
     CDS             complement(2071..2478)
                     /gene="tsaE"
                     /locus_tag="SB502_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEG0434773.1"
                     /translation="MKEFILAKNEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDARVDSPTFSIMQRYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(2475..2720)
                     /locus_tag="SB502_001337"
     CDS             complement(2475..2720)
                     /locus_tag="SB502_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEG0434774.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLAIPSTKSIPKNAQNEYVVKL"
     gene            2875..4095
                     /locus_tag="SB502_001338"
     CDS             2875..4095
                     /locus_tag="SB502_001338"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEG0434775.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMVIGRESSNDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            4108..4551
                     /locus_tag="SB502_001339"
     CDS             4108..4551
                     /locus_tag="SB502_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEG0434776.1"
                     /translation="MKVLLIKDVKAFGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGVHEVSVKLGHAIHAKFNINIKAE"
     gene            4551..5093
                     /gene="hslV"
                     /locus_tag="SB502_001340"
     CDS             4551..5093
                     /gene="hslV"
                     /locus_tag="SB502_001340"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEG0434777.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            5090..6409
                     /gene="hslU"
                     /locus_tag="SB502_001341"
     CDS             5090..6409
                     /gene="hslU"
                     /locus_tag="SB502_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEG0434778.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESAIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSNVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELDFNDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            6406..7281
                     /gene="era"
                     /locus_tag="SB502_001342"
     CDS             6406..7281
                     /gene="era"
                     /locus_tag="SB502_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEG0434779.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIIALNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDEHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLINRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFITVKKNW
                     QKDEEFLKKLLNDEN"
     gene            7268..>7862
                     /locus_tag="SB502_001343"
     CDS             7268..>7862
                     /locus_tag="SB502_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434780.1"
                     /translation="MMKINSLNKINFIKSTDLLYAQRTGISKEDELFNNLTADFKLSK
                     PFDYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFIEESDYCVLNLY
                     DQTLYLYFYQEGKFINLKKIENFNPGNMDLFFKQNRFTELLKHYESKLLLYQDLNTIK
                     HYFSSQIKCLNLNDILDKNSLLKLSSYSIKNLDQNCNF"
BASE COUNT         2919 a         1284 c         1218 g         2441 t
ORIGIN      
        1 aataatattt ctaaaaataa aacaataatt ttttatatta tttaaattaa atttaaatat
       61 aaaacaaaag tgtaatgggt ttgatagatt gatagaattt tatccttcaa gttcatataa
      121 tttttttcta tctgtagagc ttgctatatt aagatgtttg cgatattttg taatagttct
      181 tcgccctata tctactttaa attcttcttt gattaattct aaaattttac tatcgcttaa
      241 aggtttattg cgatcttcat tctttactaa atttgccaca aattctttaa cacctacatt
      301 tgaagtctct ccctcttcat caagagcaaa agcaaaaaaa tcacgcaaag ggataagtcc
      361 tctttcacaa cttaaatatt tatttgccac agctcttgat atagtcgaag cattgcgttc
      421 taaatcaagt gctaaatcct taaaagtcat aggttttatc tcttttccca tgaaaaaatc
      481 atattgatat tctactatca taagccctat tttataaaga gtagcttttc tcatcgctaa
      541 agcatcaact aaattttttg cttctttgat gtaatgactt aaaaaatcat gctctaaacc
      601 atcagtttgg attgaaattt caggataata atcatcattg atttttactt taatttcacc
      661 attttcttta taaacaaaaa tatcaggaac aattatacga gaatcttcaa aatattccaa
      721 aaaaggggga gtgctaaagc gcttaagtac agctaatgct tctttatata aaggctcttt
      781 ggtatagttt tgtatatttt caaaatccat aatcaacatt ctacaaaact catcaatatc
      841 ttcatctaac tccatatttt caagagcaaa taaaaatgct tctttgtaat ctttagctcc
      901 cactcctaca ggatctaaaa atttaaatct tgctcttact cgctcaattt cttccaaaga
      961 atactctttt aaaaattctt catcgtattc aaaatatcct tcctcattta agcattctat
     1021 aatttttttt gcaagttctt gagatttgtt tgtaggaaac aaaggaggaa gaatctgttc
     1081 atttaaaagc tcataaacac tttttttggc aagtccttta ctatccacaa aagccgaatt
     1141 tacattatgt ttataaaatg aatcaaaata attcttaccc ttatcatgag tttgtatcga
     1201 atcttgaaca tttaagaaag gattatcctc agcaaattta tctaaatttt cttttaaatc
     1261 ctctatattt gcttgtaaaa tcggcaacca agagcgtaaa gtttgagaaa ttttagtctt
     1321 gggtgcttgg gtgatttttt gctttaacat caatcaagga gtttaaactc cgctcctaaa
     1381 taatactttt tcacgtcttt attggttgca atttcatcag cattcccact agcaagcaaa
     1441 gagcccgatc ttataacata agctctatca caaatagcca aagtctcacg cacattatga
     1501 tcggtaatta aaaccccaat ccccaatctt ttaagctctt taattaaagt ttgaatttca
     1561 gccactgcta taggatcaac acctgcaaaa ggctcatcaa gaagcaaaaa cttaggttca
     1621 cacatcaagc ttctagcgat ctcacaacgc cttctttcac ctccacttaa acttaaacct
     1681 ttccttaaac gaataggctc tatacttaag agttcaagca tttgctcaac tttatcatgt
     1741 aaaatttttt tatctttata aaaaatctga gccgctaaaa gcaggttatc ttctacactt
     1801 aaatccttaa aaatactact ttcttgaggt aaataaccta tccctgatct agctcttttg
     1861 tttaaaggat cttttgtcac atctaaaccg tctaaaagaa cttttccact acttggggaa
     1921 ataagtccac atatcatata aaaagttgtc gtttttcctg caccatttgg ccctaaaagt
     1981 cctacaactt ctccgctatt aacctctaaa gaaattccat gtataatctt agttttttta
     2041 ataatttttt ctaaatttac aatttctaat ttactcataa atttcatact ttcttttgtc
     2101 atctttaatg ctaattttaa tctggatagt agaaattcca aatttcatta aagttttttt
     2161 caaattttca ccgccccatt caaccaaatg caaacctttt tcaaaaaaat tttcaaataa
     2221 accattcgct aaaagtcctt ctaaaccttc ttgataaata tcataatgat aaatgcaaat
     2281 atcatgattt tcatatcttt gcataatgga aaaagttgga gaatccaccc ttgcatcaag
     2341 accaagaaat ttaacccaag cttgcactaa gcttgttttt ccgctagcca aatctccttg
     2401 aagcaaaaca acaccttctt taggcattat ttgaagcatc gttttgatct cattttttgc
     2461 taaaataaat tctttcataa ttttaccaca tattcatttt gtgcgttttt aggaatactt
     2521 ttcgtgctag gtatagctag gactttatat ttttgagtgt attcagtaaa atgtaaagtg
     2581 ataatatcac ccaccttaac ctctttactc gctttaacaa taacgccatt aatccccact
     2641 acaccacttt tacacatatc ttcagaaata gctcttcttt tcgtgatatt aactacattt
     2701 aaaaatttat ctactctcat aaaagcaatt ttagcaaaaa aaatcaattt ttggaacaaa
     2761 atttgcttac gcctttgctt tattttttaa gaaaatagca agtaaaaact tttctttaat
     2821 gaaatttgga tacaatttta caattttcaa atctatttta acaaaggata tcttatgaaa
     2881 aatgaagtaa aaaaagtagt tttagcgtat tctggggggc ttgatacgag cattatttta
     2941 aaatggcttc aagatgagta taattgtgaa gttgtaactt ttacagcaga tattggtcaa
     3001 ggtgaagaac tcgaacctgc aagaaaaaaa gccctttctt taggcataaa agaagaaaat
     3061 attttcatta aagatttaag agatgaattt gttaaagatt atgtatttcc tatgtttaga
     3121 gccaatgcga tttatgaagg agaatatctt ttaggaacaa gtatagcaag accacttata
     3181 gcaaaaactc aagcacaaat cgccctgcaa acaggtgctg atgcagtaag tcatggtgcc
     3241 acaggtaaag gaaatgatca agtgcgtttt gaacttggtt atcttgcttt taatcccgat
     3301 ttaaaaatca tcgctccatg gcgtgagtgg gatttaaaca gtcgcgaaaa gctccttgct
     3361 tatgcacaaa aacacggtat tgatatttct aagaaaaaag gaaaatctcc ttattctatg
     3421 gacgcaaatt tacttcatat ttcttacgaa ggacttgtct tagaagatcc tgcacacgca
     3481 cctgaagaag atatgtggag atggagtaaa agcccaaaag atgctccaaa tgaaagtgaa
     3541 attatagaac ttgatttcca aaaaggagat ttagtagcga taaatggaga aaaactaagt
     3601 cctgcaggac ttttaaccaa acttaacgaa ctaggctgca aacacggtat aggacgcctt
     3661 gatatagtag aaaatcgcta tgtaggtatg aaaagccgtg gttgttacga aacaccaggt
     3721 ggtaccatac ttttaaaagc acacagggcg cttgaaagca tcacgcttga tagagaagca
     3781 gcacacttaa aagatgaact catgccaaaa tacgcaagtt taatttacaa tggctattgg
     3841 ttctcgcctg aaagaatgat gcttcaagcc ttaatcgatg agtctcaaat tcacgccaat
     3901 ggcagagtaa aactcgagct ttataaaggc aatgtgatgg ttataggacg agaaagttcg
     3961 aacgatagct tgtttaacgc agcttattgt acttttgaag aagatgaagt gtataatcaa
     4021 aaagatgcag caggctttat caagcttaat gctttgcgtt ttatcatcgc aggaaaaaat
     4081 ggaagaaaat tttaataaag gaataaaatg aaagtattat taatcaaaga tgtaaaagca
     4141 tttggaaaag caggagaaat aaaagaagta aaagacggtt acggacaaaa tttcttaatc
     4201 gctaaaggct ttgctaaagc agctactaat gaagttttaa gaaaatatga aagcgacaag
     4261 aaaaaagagg ctgaaaattt acgctttgaa atcgcaaatt tagaaaaact caaagaagaa
     4321 cttagcaaaa tcactcttga aatttcaaaa cccgtaggtg caaatggaag tttgtttggt
     4381 ggcgtaacca aagatgaaat cgctcacgcc ctaaaagaac aaagccatat agaaatcgat
     4441 aaaaaaagtt tagaatgtga taccttaaaa agcttaggag tccacgaagt aagcgtaaaa
     4501 cttggacacg caatccatgc taaatttaac ataaatataa aggcagaata atgtttcacg
     4561 caacaacgat tttagcttac aaaggtaaaa ataaatccgt aattggcgga gatggacaag
     4621 taagctttgg aaatacggtg ctaaaaggca atgctgtaaa gattagaaaa ctcaacaatg
     4681 gcaaagtttt agcaggtttt gcaggatcaa cagctgatgc ttttaatctt tttgatatgt
     4741 ttgaaaatct ccttcaaagt tctaaaggcg atcttttaaa agcagcaatt gacttttcta
     4801 aagaatggag aaaagacaaa tacctaagaa aacttgaagc catgatgctt gtacttgata
     4861 gaaatcacat ttttctactt tctggtacag gcgatgtggt cgaacctgaa gatgggcaaa
     4921 tcgcagccat aggaagtggt ggaaactatg cactttcagc tgctagagcc ttagcaaaac
     4981 ataccgattt agatgaagaa gaacttgtaa aatcaagtct tcaaatcgca ggtgaaattt
     5041 gcatttatac caataccaat atcaaaactt atgtaatcga ggatgagaaa tgaatctaac
     5101 tccaaaagaa atcgttaaat ttttagatga ttatgttata ggacaaaaaa aagctaaaaa
     5161 aatcatagct atagctttaa gaaatcgcta ccgcagaatg caacttagcc ctgagttgca
     5221 agatgatata gtgccaaaaa atatcttgat gataggttct acaggtgtag gaaaaacaga
     5281 aatcgctagg cgtttagcta aaatgatggg ctttcctttc atcaaaatcg aagcaagtaa
     5341 atatactgaa gtaggttttg taggtcgtga tgtagaaagc atggtaagag atcttgccaa
     5401 tgcagcttta aatttagtaa aaaacgaaca aagagaaaaa aacaaagata aaatcgatga
     5461 atttatagaa aataaaattt tagaaaaact tttgccacct ctaccaaaag gtatcagcga
     5521 tgaaaaacaa gaagaatata aaaacagtct tgaaaaaatg agaactaaac taagaaatgg
     5581 cgatcttgat gaaagcgcca tagagataga aatttcacaa aatatgtttg ataccaatcc
     5641 taacctacct cctgaaatgg gtgcaatgca agatatagtt aaggttatag gcgttggcag
     5701 caaaaaagtc aaaaaagaaa tgaaaatcaa agacgctaaa aatgctttaa aaaacgaagc
     5761 aggagaaaaa atcctagatc aagaaagcat caaaagcgaa gccttaaaaa gagcggaaaa
     5821 tgaagggatt atttttattg atgaaatcga taaaatcgct gtttcaagcg gaaattcaaa
     5881 ccgccaagat ccaagcaaag aaggggtgca aagagactta cttcctatag tcgagggatc
     5941 aaatgtacaa acaaaaatag gtactttaaa aaccgatcat attctcttta tcgccgcagg
     6001 agcttttcat cttagcaaac caagcgatct tatccctgaa ttgcaaggac gctttccttt
     6061 aagagtggaa ttagatagtc ttgatgataa agctctttat gaaattttaa cacgccctaa
     6121 aaattcactt ttaaaacaat actctcagct tttaaaaact gaaaatttag aacttgattt
     6181 taatgatgag gcaattaaag aaatagcaaa aatagcttca agagccaatg aagaaatgca
     6241 agatataggt gctagacgct tacatactgt gatagaaaaa ttacttgaag atttaagctt
     6301 tgaagctgat gagtatgcgg gtaaaaaatt cgtagtggat aaaaaaatgg tagaagaaaa
     6361 actcggagat atcatagaaa ataaagatct tgcaaggtat attttgtgaa aagtggcttt
     6421 gttagcatca tagggcgtac taatgcagga aaaagtactt taatcaattc cttattagaa
     6481 gaaaaaatcg ccctagtttc tcacaaacaa aatgccacaa ggcgtaaaat caaagccata
     6541 gtgatgcatg aaaaaaatca aatcattttt atcgataccc caggacttca cgaaagcggt
     6601 gctacgctta atcaactgct tgtccaaagt gctattaaat ccatgggaga ttgtgatgtg
     6661 attttatttg tggcaagtgt ttttgatagt acaaaagact atgaaaattt ccttagtcta
     6721 aacccacaag taccacatat catcgcttta aataaagtag atttaaccga caatgctacg
     6781 cttttaaaaa aacttagcga atatgcaaaa tttagccaac attttaaggc tatcattcct
     6841 tattcttcta agaaaaaaag ctataaaaaa ggcttgttag atgagatagt aaaatacctt
     6901 gatgaacatg agtattttta tgatcctgaa tttttaagtg cgagtagcga aaaagaactt
     6961 tatagagatt tcatacttga aagtatttat gaaaatttaa gcgatgagct tccttatagt
     7021 agcgaagtgc ttatcaatcg caccaaagac acacctaatc ttttaatcct agaagccaat
     7081 atcatcacag atacaaactc tcacaagggt atgcttatag gaaaagaagg ggcaacttta
     7141 aaaaggatag gcaaagatgc acgctttaaa atttcaaaac ttgcacaaaa aaaagtactt
     7201 ttaaagcttt tcataacagt gaaaaaaaac tggcaaaaag atgaagaatt tttaaaaaaa
     7261 cttttaaatg atgaaaatta attcattaaa taaaataaat tttataaaat ctacagattt
     7321 gctttatgct caaagaacag gaatatccaa agaagacgaa ctttttaaca atttaaccgc
     7381 agattttaag ctaagcaaac cctttgacta tcaaatagct ttttttaaac ataatgaaat
     7441 ttatcattgt tttttagcgc ctgtttacaa attgaaaaaa agtcgttttt gctttcctga
     7501 gcctttaatt tttcaagctt tgtttgatga aagatttatt gaggaaagtg attattgtgt
     7561 tttaaattta tatgatcaaa ctttatattt atatttttac caagaaggaa aatttatcaa
     7621 tcttaaaaaa atcgaaaatt tcaatccagg taatatggat ttatttttta aacaaaatcg
     7681 atttacagaa cttttaaaac actatgaaag caaattgcta ctttatcagg atttgaatac
     7741 aatcaaacat tacttctcat ctcaaataaa atgtttaaat ctaaatgata ttcttgataa
     7801 aaatagttta ttgaaattaa gttcatatag tataaaaaat ctagatcaaa attgtaattt
     7861 ta
//
LOCUS       DARATF010000072         7746 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.072, whole genome shotgun sequence.
ACCESSION   DARATF010000072 DARATF010000000
VERSION     DARATF010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7746
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.072"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            136..993
                     /gene="cheP"
                     /locus_tag="SB502_001344"
     CDS             136..993
                     /gene="cheP"
                     /locus_tag="SB502_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HEG0434781.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAE
                     IISSDPLMMAKLLQLANSPYYGFTREITTINQVITLLGVGNIINIVMADSIRDNFKID
                     VSPYGLNTQNFLKTCNEEATFIVNWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REKVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLKEAKTQGINFDLNNLLSKLPNK
                     AKENLNKED"
     gene            1021..1500
                     /gene="cheQ"
                     /locus_tag="SB502_001345"
     CDS             1021..1500
                     /gene="cheQ"
                     /locus_tag="SB502_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HEG0434782.1"
                     /translation="MMKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNVEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(1469..2779)
                     /locus_tag="SB502_001346"
     CDS             complement(1469..2779)
                     /locus_tag="SB502_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434783.1"
                     /translation="MNKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFLCIVFLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHKWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIVVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKISIIKSCVFFSVFFGIASLLYFNTLYRQNADFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALNNLSNFWRFSLGLYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(2763..2939)
                     /locus_tag="SB502_001347"
     CDS             complement(2763..2939)
                     /locus_tag="SB502_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEG0434784.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYTQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMEIKNEQNP"
     gene            3032..3505
                     /gene="moaC"
                     /locus_tag="SB502_001348"
     CDS             3032..3505
                     /gene="moaC"
                     /locus_tag="SB502_001348"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEG0434785.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITSRIATASGMIYMSQEAFDVIK
                     NNTAKKGPVLQTAIIAAIMGAKKTSEIIPMCHPLMLSKIETDIVEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRIMDIVLESKEGGKSGKFVRS"
     gene            3483..3746
                     /locus_tag="SB502_001349"
     CDS             3483..3746
                     /locus_tag="SB502_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HEG0434786.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHIKASEIFEEILGQREY
                     KFEHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            3736..4896
                     /locus_tag="SB502_001350"
     CDS             3736..4896
                     /locus_tag="SB502_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434787.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLGKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYGYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
     gene            complement(4915..5673)
                     /gene="xth"
                     /locus_tag="SB502_001351"
     CDS             complement(4915..5673)
                     /gene="xth"
                     /locus_tag="SB502_001351"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEG0434788.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            5791..7329
                     /gene="eptC"
                     /locus_tag="SB502_001352"
     CDS             5791..7329
                     /gene="eptC"
                     /locus_tag="SB502_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HEG0434789.1"
                     /translation="MLRLTWLQFTFFNSLMIVLLNFNLFYFVYEKNTQNWFITFVFIV
                     AYFALVHVICSLLFIKFFTKFFSILFIISSFLSVYFISFYGVLIDSDMIQNVVQTDIK
                     EVKDLLNLKLILFVVLALLLVFYVVKVKIDYYGSFKSHLKIKIINIISGLIVVCAVLI
                     PLSKTFLPFFRNYNEIRMYNTPFYQIYAVYRYYVRFVKAKPEFKTIANDAYRENNHTK
                     KLLVLVVGETARAANYSLGGYAKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSI
                     SKRENYSSSEFQENAMDVLYKTGVDTAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLL
                     APFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALIN
                     TYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENDIYLHGMPYAIAPSY
                     QTRIPAIFWSNDEKLMNLAKEHKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKL
                     KANP"
     gene            7326..7682
                     /locus_tag="SB502_001353"
     CDS             7326..7682
                     /locus_tag="SB502_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEG0434790.1"
                     /translation="MKPKYHFLNNARYALEGIFALFKNEMAFRIELCIIIPAIVFSFF
                     LKVSFLEHLLLVSVLMLILIIEALNSAIEACVDLITNEWHEKAKIAKDCASTAVFFSV
                     LLALFVWSFILYSIYL"
     gene            7679..>7746
                     /locus_tag="SB502_001354"
     CDS             7679..>7746
                     /locus_tag="SB502_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEG0434791.1"
                     /translation="MKFEKLIQEILGKKRFELLKFL"
BASE COUNT         2812 a         1004 c         1159 g         2771 t
ORIGIN      
        1 ctaaatcaag acaccataaa ttcggcattt atttgtaatt tttattatac cttaagtcat
       61 aaaaaatgca ataagtaaat taaaatttag atataattgc aaattataat aatattaatt
      121 aaggataaat taaatatgat tggagatatg aatgagcttt tattaaaaag cgttgaagta
      181 ttgccacctt tacctgatac tgtaagtaag ttaagaaaat atgtgagcga ggctaattca
      241 aatatagaaa ctatgaaagt tgctgaaatc atttcaagcg atccgttgat gatggctaag
      301 cttttgcaat tagcaaattc tccttattat ggttttacaa gagaaattac aaccataaat
      361 caagtgatta ctttattagg cgttggtaat atcatcaata tagttatggc tgactccatt
      421 agagataatt ttaaaataga cgtttcacct tatggtttaa atactcaaaa ttttttaaaa
      481 acgtgcaatg aagaggcaac ttttatcgta aattggctta atgatgaaga taaaaaactt
      541 tctcatcttt tagttccttg tgcaatgctt ttaaggcttg gtattgttat tttttcaaat
      601 tttcttatac aaaatcataa ggataaggat tttttagctt ttttaaataa aaatgaaaat
      661 cttgctttag cggagaatga atttttaggc gtagatcata tttctttctt gggatttttg
      721 ttacatcgtt ggaattttga tgatgttttg attgaaagta tatgttttgt tcgcactcct
      781 catgctgctc gcgaaaaagt gaaaaaatcc gcttatgctt tagcaataac agatcatctt
      841 tttgctccgc atgatggctc ttctccattt aacgcaaaag ctgcagttgc tttacttaaa
      901 gaggcaaaaa ctcaaggaat taattttgat ttaaacaatc ttttatctaa gcttcctaac
      961 aaagctaagg aaaatttaaa caaagaagat taaagagcct ttttaaggct ctaaattgta
     1021 gtgatgaaaa gtttaatctt acctcctaat gaatttttag atcactatat tttaaacgct
     1081 gaatttcatc gttttgctgg aatttcaaaa aatgcttata aattttggaa aaatgtagaa
     1141 ataggtagat atcaaggaac aagaattata tttttgcata gaaattgcat tttagaaaaa
     1201 catcagcaag ctttaaggca atgtagtggt ttaaatggtt ttgtattggc aagtgctttt
     1261 tgttctttta ctggattagc tccctctcat ttagtggaaa aaaataattc ttctatttat
     1321 aaacttttag agcttaagga gatttgcggg attaaatttg ttaatttaaa aaaattttat
     1381 gattttttag ggctaaatta tcatcagcat atttatatag aaaaatgcca tttttttagc
     1441 ccagctcctt ttgaaaagcg tattaaaatc actgagagta tgtgcgttgg gtattattaa
     1501 gataagaaaa aataaatgca catagcaaag ctataatagc caaaaagaaa acataaagtc
     1561 ccaaagaaaa acgccaaaaa ttacttaaat tatttaaggc aaaactatgc aagaaaaaag
     1621 caagttgcgg agttaaacct ccagctatag cataagcaat attatatgaa aaagaaagtc
     1681 ctgaaaattt aatttttgca tcaaatactt cactcattat taaagggcaa aaattcatca
     1741 ctccgctaaa aaaacataca agtaaatata agcaagctac taggttaaaa tcagcatttt
     1801 gtctatataa agtattaaaa taaagcaagc ttgcaattcc aaaaaaaaca ctaaaaaata
     1861 cacaagattt gataatgctt attttatccg ctaaaattcc acttataata caccctaggc
     1921 aaataagtaa aattccacct atttgaagat aggtttgtat agaagtatta atttgaagta
     1981 tttttgccat ataactaggc ataagcaaaa tcattacaac aatacaacct gtcaaaaccc
     2041 aagtaatcat catagaaaga acaattccca ttttagcttt tttaaacact tcttttaaag
     2101 gaaatttttc taaagccttg tcttttttca tttgttcaaa aacaggagtt tctcttaaaa
     2161 attttctcaa ataagcagaa ataatcccaa aaattccacc taaaaagaat ggaattctcc
     2221 aagcccattt atgaagttct tcttgggtat aaattttatt cataattaaa aaaactaaac
     2281 tacctaataa aattccacct acaaccgaag cggttaaaat tcccaaataa gttctttttt
     2341 gaccttgtgg tgcgtgttcg tatacaaaaa cccaagctcc agggagttcc ccgcctatag
     2401 ctataccttg acaaatgcgt ataaaaacta aaaatacaat gcaaagaaaa cctatgcttt
     2461 cataatttgg aataaaagct agagtaaaag ttggaataac cattaacaaa atactaatca
     2521 taaacattct tttacgtcca aatttatctc caaaatgtgc cagtatcaca ccccctaagg
     2581 gacgcgctaa atatccagct gcaaatattc cataagtatt aaacatttgc caaaaactac
     2641 ttaaatcttt tggaaaaaag tttgttgaaa tataatttgc aaaaaataca aaaataataa
     2701 aatcataaaa ttctaaagtt ccacctaatg atgaaagtcc taaaactttt atatcttttt
     2761 ggttaagggt tttgttcatt cttaatctcc atctcataaa aatcatcatc attgttatca
     2821 tcatcgtatt cataatcatc atcatcataa ttataatttt tatggtgatt ttgtgtatat
     2881 tcttcatctt cattctcata atcatcgtaa tttaaatctt cttcatcttc ataagccatt
     2941 gttttctcct taaataaaaa tacaaagctt attttatctt aaatttgttt ggttttgcta
     3001 taatttttat aattttttaa aaggtgaatt tatgaaatta agtcatttag atgaaaaaaa
     3061 tcatcctaaa atggtagatg taagcgataa aaatattact tcaagaatag ccacagctag
     3121 tggtatgata tatatgagtc aagaagcttt tgatgtaatt aaaaacaata ccgcaaaaaa
     3181 aggtcctgtt cttcaaacag ctattattgc ggctataatg ggggctaaaa aaacaagtga
     3241 aattattcct atgtgccatc ctttgatgct ttctaagatt gaaacagata ttgtggaatt
     3301 tgttaaagaa tgtgcattta agcttattgt aacagttaag tgtgaaggta aaacaggagt
     3361 tgaaatggaa gctttaagtg gagttagtat aggactttta actatatatg atatgatcaa
     3421 ggctatagat aaatcaatga gaattatgga tatagtgctt gaaagcaaag aaggaggtaa
     3481 aagtggtaaa tttgtgcgat cttaaaaaag aacctcagat caattatcct actttttggg
     3541 attataaggt gatttttgag gtgcatatta aggcaagtga aatttttgaa gaaattttag
     3601 gtcaaagaga atataaattt gaacattcga attcaagtgc gagtggaaaa tatcaaagtt
     3661 atttgttaaa tgtttatgtt gatagcaaaa aagatcgttt ggatatattt gataaattaa
     3721 aagctaaagc aaaatttgta ctttaagaaa gaaggaaaaa tgaaaaatac tttaattatt
     3781 tttgaaaatt ctttatcaaa tctcggtaaa gatgaagcaa gtgatttact tgaagacttg
     3841 agttttaatc ttgcgtataa gcaaatttca cataatcctc atgaaacaaa aaaagtttta
     3901 aattctcttt tggttgaatt tttaactatt ttgaaaaaac ttgatttttt tgatgatgaa
     3961 aatgttacaa aggttatcaa agctttggtt aaggcgagta ttgtagatgc tcaaaattca
     4021 ctttatgggt atattagcga agctgaatta ttaaacaaac agattgaaaa tcaaaagaat
     4081 ttgattaaaa atcaaatcag cgataatttt tttgaattcg agaatatttt acaagaatgt
     4141 tctttttgtg atgaatttag tggcggttta aatgatgcta ttttatttga tatagaaatg
     4201 cttggaattt taaaagaaac cgctgaaagt gcttttttaa ctacattaga aaaggctgaa
     4261 gatatagaac ttacaagtag tgaaatagct aaaaatcttg tatataatgc catttgtgaa
     4321 gctcattttg aaaaagaaag aattttaaaa atttcaagta ttattttaaa taccgctttt
     4381 gaaatagcta atgaatctat ggcttatgca aaagatcttt gtttaggcgt gattaaaggc
     4441 acaagggatg gtattgtttt ggcaatggaa aaatttaaag cttcattaac ttatgcaaat
     4501 tttgaagaag atgttagttt aaaaagcaaa gaactaatag gtatagaaga tgattttatt
     4561 gctcttttaa aaaaagagat tcaattacaa aatgatcctt gtaagagtat agttgagaat
     4621 ttgctagaac atgaacttga taatcttttt gctaaattta gacgtcttgc aggtgaaagc
     4681 agagagcaac taatattagt tttaaatgat attaagaaaa atccaaagat taatgatttt
     4741 aacaaactta ctcaaagaaa attaaatcgt tttaaacaag aaatttttga attagaaaaa
     4801 attgctagtg aaaaatacaa agatttaaat tccaaaaaag ctaaaaagct cggtgtaaga
     4861 ctttgggaaa aagcaaaaaa attcgttaaa aaataatatc ccatttttgg gatattaaat
     4921 atctatttct atacctacag gtgcgtgatc agagccaaaa atatcatctc ttatgaaagc
     4981 gtttttaagt ttatctttta aaccctttga aatgaaaaaa taatcaatcc tccagcctac
     5041 atttctttct cttgctttca ttctatagct ccaccacgag tatttttctt tgatttcacc
     5101 attaatttct ctaaaagtat ctataaaacc aagctttagc aaatcatcaa tccaagctct
     5161 ttctataggt aaaaaacctg aagtgttggc attggctttt ggatgagtaa gatcgatttc
     5221 tttatgagcg gtattgacat caccgcaaat gataatttca aatccatcct ttaaaagttt
     5281 atccaaatac actaaaaaat ctgcataaaa tttcatctta aaatttaaac gctcttcatc
     5341 tttttgacca tttggaaaat agatattaaa aagtgcaata tttttaaagc ggtgttctaa
     5401 aaccctacct tcttcatcat caaaaaattc gcattttttt acttcgctat taaaattaca
     5461 aagactcatt accccagaat accccgctct tttagcagaa ttaaaataca tgtgtttaaa
     5521 aggatattca taaatttttt taggaaattt atcttcatgt gctttgattt cttgaaaacc
     5581 tataaaatca atttgttctt gtgctatcca atcaagtgca tttttatcac aaatagctct
     5641 taagccattg acattccatg aaagtagttt cattattttc cttaaaattt tcattaaaag
     5701 tgtaaatcat aacataaaaa gatttaaaac tacaatccat ttaaaaaaat tcaataaaat
     5761 taaaagctta aatttggagg tgggatttat atgcttagat taacttggct tcagtttact
     5821 ttttttaatt ctttgatgat tgtattgttg aattttaatt tattttattt tgtgtatgaa
     5881 aaaaatacac aaaactggtt tataactttt gtttttattg tggcctattt tgcccttgtt
     5941 cacgtgattt gctctttgct ttttataaag ttttttacta aatttttttc tatattattt
     6001 ataatatcat cttttttaag tgtttacttt attagttttt atggggtgct tatagattct
     6061 gatatgatac aaaatgttgt tcaaacagat atcaaagaag taaaagattt gttaaattta
     6121 aaattaatct tatttgttgt tttggcttta ttgttggttt tttatgttgt taaagtaaaa
     6181 attgattatt atggtagttt taaatcccat ctaaaaatta aaattatcaa tataatatca
     6241 ggtttgattg ttgtttgtgc ggttttaatc cctttaagta aaactttctt gccttttttt
     6301 agaaactata atgaaataag aatgtataat accccttttt atcaaattta tgccgtatat
     6361 cgctattatg ttcgttttgt aaaagctaag ccagaattta aaactatagc taatgatgct
     6421 tatagagaaa acaatcacac taaaaaactt ttagttttgg tagtgggtga aaccgctaga
     6481 gcggcaaatt actctttggg tggatatgct aaaaatgata ccaattttta taccaaaaaa
     6541 gataatgtag tgttttttga taatttttca tcatgtggaa cagcaacagc ggtaagttta
     6601 ccttgtatgt tttctatttc taagcgtgaa aattattcaa gttcagaatt tcaagaaaat
     6661 gcgatggatg tgctttataa aacaggtgta gatactgcat ggtttgataa taattctggt
     6721 ggttgtaaag gggtttgtga tagattagct tataagcaaa agctttctag tgatttggat
     6781 gaaaatttac tcgctccttt taaagaaaaa ttaaatcatt taagtgatca aaatataata
     6841 gttcttcatt tgcaaggttc tcatgggcca acttattata aacgctatcc aagtgaattt
     6901 aaaaaattca ctccaacttg tgatactaat gagctttcaa aatgtgatag cgaggctttg
     6961 atcaatactt atgacaatac tttactttat acagattatc ttttaagtga gattataaaa
     7021 ctattaaaag agcaaaaaag ctatgaaagt tctttgtttt atctttcaga tcatggtgaa
     7081 agtttgggtg aaaatgatat ttatcttcat ggtatgcctt atgctatagc gccaagttat
     7141 caaacccgta ttcctgctat tttttggagc aatgatgaaa aattaatgaa tttagctaaa
     7201 gagcataaag gtttaaaact ttctcaagat aatcttttta gtactctttt aggatatttt
     7261 gatgtaaaaa caagtgttta tgagccagaa tatgatttat taaatcctaa acttaaggca
     7321 aatccatgaa gcctaaatat cattttttaa ataatgcaag atatgcttta gaagggattt
     7381 ttgctttatt taaaaatgaa atggcgttta gaattgaact ttgtattatt atccctgcga
     7441 tagtttttag ttttttctta aaagttagtt ttttggagca tttattattg gtaagtgttt
     7501 taatgcttat tttaattata gaggctttaa attcggctat tgaagcttgt gttgatttga
     7561 ttacaaatga atggcatgaa aaggcaaaaa ttgctaaaga ttgtgcgagt acggcagtgt
     7621 tttttagtgt gcttttagct ctttttgttt ggagttttat tttatatagc atttacttat
     7681 gaaatttgaa aaattaatac aagaaatttt gggaaaaaag cgttttgaat tgttaaaatt
     7741 tttatg
//
LOCUS       DARATF010000073         7720 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.073, whole genome shotgun sequence.
ACCESSION   DARATF010000073 DARATF010000000
VERSION     DARATF010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7720
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.073"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            25..1113
                     /gene="nusA"
                     /locus_tag="SB502_001355"
     CDS             25..1113
                     /gene="nusA"
                     /locus_tag="SB502_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEG0434792.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            complement(1129..2316)
                     /locus_tag="SB502_001356"
     CDS             complement(1129..2316)
                     /locus_tag="SB502_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434793.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCILILIGISFLVRLSIPDFHHKTQSRFFTMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INDKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLELITGLLGMIFIFVAFYWKWFYK
                     KYL"
     gene            2391..3437
                     /locus_tag="SB502_001357"
     CDS             2391..3437
                     /locus_tag="SB502_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HEG0434794.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYKRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            3437..4657
                     /locus_tag="SB502_001358"
     CDS             3437..4657
                     /locus_tag="SB502_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEG0434795.1"
                     /translation="MQYLDSRGVKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKILQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSSNDGDEKSIEI
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSK
                     NIKDEILIRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYESLSKRLSMSFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNLSFASIQNEN"
     gene            4647..6470
                     /gene="recG"
                     /locus_tag="SB502_001359"
     CDS             4647..6470
                     /gene="recG"
                     /locus_tag="SB502_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEG0434796.1"
                     /translation="MKIKESDFEFFKKLKIKSAIDLALLLPKKIENLNPSKNPKENEI
                     CTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGICKVGKGLIFNAKLS
                     RFNHTWQFNNPKILTSFEGFSPKYQILGLKDAKIAAFIHKYLNYENLQESGIGDKYIH
                     FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANW
                     LKDLPFSLTKDQLNALKDIEKDLHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILAHQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLIIGTHALIHLE
                     SHNAVLVMIDEQHRFGSAQREKIHSLSKQEFAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKQMPFKKDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQ
                     AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVG
                     AERLGLATLHQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKMPN"
     gene            complement(6486..6869)
                     /gene="ctb"
                     /locus_tag="SB502_001360"
     CDS             complement(6486..6869)
                     /gene="ctb"
                     /locus_tag="SB502_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HEG0434797.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWTGMLLGEGDYNGQPLKKHLDLPPFPQEFFEVWLGLFEESLNIVYNEEM
                     KTVILQRAQMIASHFQNMLYKYGGH"
     gene            6965..7561
                     /gene="nssR"
                     /locus_tag="SB502_001361"
     CDS             6965..7561
                     /gene="nssR"
                     /locus_tag="SB502_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HEG0434798.1"
                     /translation="MKDYLELLSSVGKLKKFQKNSILFYEGEEAKKFFILLKGKIRIY
                     KSTSSDKEITLHYFNPPNFIAEMPAFKKLNYPANAIFEEDGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKKLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGKIEILNKDMIIKELW"
     gene            7576..>7720
                     /locus_tag="SB502_001362"
     CDS             7576..>7720
                     /locus_tag="SB502_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0434799.1"
                     /translation="MDFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKI"
BASE COUNT         2933 a          983 c         1283 g         2521 t
ORIGIN      
        1 cccacaaaaa aggttttata aaatatggaa aagatagcag atattatcga atctattgct
       61 aatgaaaaaa atttaaactt agagaatgta agagaaaagg tagctaccgc tttaatcaat
      121 actgcaaaaa gaatttatgg acaagaatat gagttttttg tggatcctaa aaatttaaat
      181 ctttatcaaa aaattaccat agtagcagat aatgacgaga gattgcaaaa taaaagtgag
      241 agttttatcg cgttaagtaa ggcaaaatca gaagctccag atgttgaaat aggagatgaa
      301 ttaacctatg aatgttcttt ggaaaattta ggaagaactg cggtaaatac cttgcataaa
      361 gaacttgaat atcatataca aaaattatta gaacaaacta tttttgaaaa atataaaaac
      421 aaagtagggc aaatggtttt tggtacagtt gttagagtgg ataatgaaga aaatactttt
      481 attgaaatag atgaattaag agctttttta ccgagaaaaa atcgcattaa aggggaaaaa
      541 tttaaaatag gtgatgtggt aaaagctgtg atacgccgtg tttatacaga taaaggtatt
      601 aaaatcgagc ttagtcgtac aagtcctaaa tttttagaat gtttacttga agctgaggtt
      661 ccagaaatca aagatggtta tgtcaatatt ataggatgtg ctagaattcc aggtgaaaga
      721 gcaaaaatca ttcttcaggc caatggagca aatatcgatc ctgtaggtgc tacagtaggt
      781 gttaaaggtg taagaattaa tgcagtaagc aaagagcttc ataatgaaaa tattgattgt
      841 atagaattta caaatgagag tgaaatttta atttctcgtg ccttggctcc cgctattgta
      901 aattctgtaa aaattgaaga taaaaaagct attgtaagtt taaatagcga acaaaaaagc
      961 aaagccatag gaaaaaatgg tattaatatt cgccttgctt ctatgttaag tggttatgaa
     1021 atagagctca atgaattaag ctcatcacag ctaaataatg ccatcagcaa tgaagaagca
     1081 atgaaaaatc ttcaagattt atttaaaatt taaaatattt gtgaattttc acaaatattt
     1141 tttataaaac cacttccaat aaaatgccac aaagataaaa atcataccca ataagcctgt
     1201 aattagttct aaactcaagc ctatttcaaa taaaaagccc ataagcattg aaataatagc
     1261 gctaaaacta agataaatca tatctgtata agcgatcact ctaccatgat attctttgtc
     1321 ggcatttttt tgtatcatag tgtaggtgta agcccaaagt gctgaggtaa aaaaacctgc
     1381 accgattaaa cctaaaaaag aaatataaaa attaaattga gttaaagccc aaagtataat
     1441 acccaagcct tgaccaagat acatgtaaaa taaattttta tcattaataa atttgcttaa
     1501 aaccataggt cctatagcta aagaacaagc acgtactgca tttaaaaacc ctattactaa
     1561 agcagcagat aaaacttctt tatattgatg ttgcgctaaa agcgtaacca aggtttcata
     1621 agcagttaaa cctataaaag cgtgaagcaa gataagatga aaaattatct tattgtttaa
     1681 aacatagaaa aatccttctt ttatcatggt aaaaaagcga ctttgtgttt tgtgatgaaa
     1741 atcaggaatg cttaatctta ctaaaaaaga aatgcctatg agtataagta tacagtcaaa
     1801 tagaaaagcg gttttaactc ctagaaaata aataaaaatt cccgcacttg ccatacctgc
     1861 tgtataagaa atcgcccaaa tgacactgtg catttcatta gcgagtttaa gttcttgagg
     1921 agttaaaatt ttggccaata aactcatttc agcttgaaaa taaatcgaag caacacaaag
     1981 tcttatgaaa attaaaataa ataaaagcca aagcatacta agacttgtga caaaaataag
     2041 acaaaaaata gaaattaatt ctatgctaat catgctgagt aaaagttttt taggtttatt
     2101 tttctctact atgacgccat taataggagc aagtaaaact ccaggtaaaa aagcaagcat
     2161 agcacttgta gctgttgccc aagtaggagc attaagctcg actaaaaggg taaaaactcc
     2221 cgtttgagaa aaccatgctc caaaatatac tataaactga accgaagcca atattctgat
     2281 atttttatta ttttttaata gttcaatgta attcataagc gaaactatag cataatttat
     2341 attttaaatg ctataattat tttaattatg taaaaaaaca aggaaaaatt ttgaaaagac
     2401 tggataaaaa agaagcttta gatttattac accatgcaag tttaactgaa cttggagaaa
     2461 tggcttataa aagaaaatta gaacttcatc ctgaaaaaat cactactttt gttgtagata
     2521 gaaatattaa ttataccaat gtttgttgta ttgattgttc tttttgtgct ttttatcgcc
     2581 atcataaaga agatgatgct tatattttaa gctttgagga gataggcaag aagatagagg
     2641 agcttgaagc tattgggggt acgcaaattc tttttcaagg cggggtgcac ccaaagttaa
     2701 aaatagaatg gtatgaagaa ttagtttctt ggataaaaga acattatcca aatatcactg
     2761 tacatggttt ttcagcggtt gagatcgctt atatcgcaaa ggcatctaaa atttcaatta
     2821 ctgaagtact tcaaagacta caagctaaag gtttattttc tataccagga gcaggtgctg
     2881 aggtgctaag cgatagggtg cgtgatatta tcgcacccaa taaatgtgat acagctactt
     2941 ggttagaagt acatcgccaa gctcataaaa tcggcatgaa aagtacagct actatgatgt
     3001 ttggaacggt tgaaaatgat gaagaaatca tcgatcattt tgagcatttg agaaaattgc
     3061 aagatgaaac agggggattt agagctttta ttttatggag ctttcaaagt gataatactg
     3121 ctttaatcca aaaacatcca gagattatga aacaaagttc taacaagtat ttaagacttt
     3181 tagctttagc aagactttat ttagataatt ttaaaaattt acaaagttct tgggtaactc
     3241 aaggctcgct tataggtcaa cttgctttaa aatttggggc caatgattta ggctcaacca
     3301 tgatggaaga aaatgtagta agtgctgcag gagcaagtta tagaatgaat caagatgaga
     3361 tgataaggct gattagaagt ttaggcgaaa atccagctaa acgcaatacc gcttatgaaa
     3421 ttttagaaag gttttaatgc agtatttaga cagtaggggt gttaaaatcc cttttatttt
     3481 tgaaaaaaat tctgattttc ctattgttgt tttaaagctt gtttttagaa attgcgctag
     3541 aagttatgat gaaatagcag gcttagctaa gatgttttca cgtattttaa atgaaggtgt
     3601 ggatgataaa ttttttaaag atttagaatt tagagcgata aatttagagg caagtagtgg
     3661 ttttgaaagt ttggaaatca atctttcttg tttaaaagaa aattttgatt ttgctttaaa
     3721 gagcttggaa aaattgcttt taaaaccaag aatagaagaa aaaattttgc aaaaattaaa
     3781 aatcaatgcc ttaggtgagc tcgcgagtaa aaatagtgat tttgattatt tagcaaaaaa
     3841 tttacttaat gctcaaattt ttaaatgcaa agaatttcaa agctcaaacg atggagatga
     3901 aaaaagtata gaaatcttat ctttaaaaga tttacaaaat ttttataaaa attttatcca
     3961 tcttagcgat ttggttgtga ttttaggagg agatttagaa gaaaaacaag ccaaggaaga
     4021 tcttttaaaa ctattatcaa aacttcaaat aggcaaaaaa aatactccaa aaaaatatga
     4081 attaagcaaa aacattaaag atgaaatttt gatacgccca gaaagcgaac aagcttatat
     4141 ttattttgct acaccttttt ttgctgattt taaagataag gatttatatc ttgcaaaaat
     4201 tgctttattt gttctagggc aaggaggatt tggttcaagg attatggaag aaattcgtgt
     4261 taaaagaggt cttgcatact cagcttatgc tatgcttgat atgaatatgt ctttttctag
     4321 agtttttgga tatttacaaa ctaaaaatga aagcgctaaa gaagctaaaa aaatcgtaaa
     4381 agagcttttt gaagatttta taaaaaatgg catgactcaa aatgaacttg atcaagctaa
     4441 aaattttctc ataggatcaa ctcctttgcg ttatgaaagc ttaagcaagc gtttatctat
     4501 gtcttttaac gaattttatc aaggtttaaa tttgggatat tataaagaag agttaaaact
     4561 tatggaaaag gttaaacttg aaaccataaa tgcttatatt aaaaaacatc aagagctttt
     4621 aaatctaagt tttgcaagca tacaaaatga aaattaaaga aagtgatttt gaatttttta
     4681 aaaaattaaa aattaaaagt gctattgatt tagcgcttct tttacctaaa aaaattgaaa
     4741 atttaaatcc aagtaaaaat cctaaagaaa atgaaatttg cacccaaaaa atcactataa
     4801 aaagcgttag ttcaagaaaa aatcaacttt ttggtttagg tttttgtgaa gaatggcaag
     4861 aaaatatttc ttttgtgttt tttcatccta gagcttggca ttttgggatt tgtaaggtag
     4921 gaaaagggct tatttttaat gctaaactct cgcgttttaa tcacacttgg caatttaaca
     4981 atcctaaaat tttaacttct tttgagggtt ttagtccaaa gtatcaaatt ttaggtttaa
     5041 aagatgcaaa aattgctgct tttatacata aatatcttaa ttatgaaaat ttacaagaaa
     5101 gtggcatagg ggataaatat atacattttc ttttaaattt gcatgcttat gatgaaaaaa
     5161 gtttttttat gtttgaaaat ttgcaaaatt ttagcaaaga tttaaaatat atagaaatat
     5221 ataatttttt aaagcgttta aaagctaaaa aaacgcattt taaagctcat caaatcaatg
     5281 tttttaacat agccaattgg cttaaagatt tgcctttttc tcttactaaa gatcagctta
     5341 acgccttaaa agatatagaa aaagatttac actcaaaaga agccaaaagg cgtgtgatta
     5401 tgggtgatgt agggtgtggt aaaaccttgg ttttgcttgg tgcggctttg atggtttatc
     5461 ctaaacaagc tattttgatg gcacctacta gtattttagc gcatcagctt tatgaagagg
     5521 ctaagaaatt tttgcctgat tttatgaata ttttgtttat taaaggaggt aaaaaagaaa
     5581 aagatttaga acaaaatatt caaaaagcaa atcttattat aggtactcat gctttaattc
     5641 atttagaaag ccataatgcc gtacttgtaa tgatagatga acaacatcgt tttggctcgg
     5701 ctcagcgtga gaaaattcat tctttaagta aacaagaatt tgcccctcat tttatacagt
     5761 tttcggctac gcctattcca agaactttaa gcatgataca atctgaactt ttaaatttta
     5821 gtttcattaa acaaatgcct tttaaaaaag atatcacaac ttattgtata caaaatgaag
     5881 gcttttctaa gcttagcgag aagatcaaag aagaaatcgc taaaaatcat caaattatca
     5941 ttatttatcc cttagtgagt gctagtgata atattcctta tctttcttta gagcaggcta
     6001 aagaatattg gcagagtcac tatgaaaaag tttttgtaac tcatgggaaa gataaacaaa
     6061 aagatgaaat tttagagcgt tttagagatg agggaaatat tttactaagc actacagtag
     6121 tggaagtggg catttctttg ccaagattga gtatgatagt gattgtagga gcggaacgtt
     6181 taggacttgc taccttgcat caacttcgtg gtcgtgtagg tcgtgtaggg cttaaaagca
     6241 cttgttatct ttatactaaa cttaaagaaa ttccaagtcg tttaaaagaa tttgctagca
     6301 ctttagatgg gtttaaaata gcagagcttg atcttaaaaa ccgtttgagt ggagatttgc
     6361 tcgatggttt tatgcaacat ggaaatgagt ttaaattttt tgatttttct aaggatgagg
     6421 agattttaga aaaggtaaaa aaagatttgg caaaaaaaat gccaaattaa tgtccaccat
     6481 acttattaat gtccaccata cttataaagc atattttgaa aatgtgaagc tatcatttgt
     6541 gcacgctgta aaataactgt tttcatttct tcattataaa ctatatttaa actttcttca
     6601 aaaagtccta gccaaacttc aaaaaattct tgaggaaaag gaggtagatc tagatgcttt
     6661 tttaagggtt gcccattata atcaccttcg cctaaaagca tgcctgtcca aaaatttcct
     6721 atttttgctt tatgttcttt ccactcttca tcacttgttc caatagcatt gttaaaaata
     6781 ggacctaaat ccttatcttt tctaactttt tcataaaata tttccatgag ttttgctatg
     6841 ctttcttgat taattgtttc aaatttcata taagcctttc ttgaatgtta attttatggc
     6901 gttaatatag caaaaataag ataaattaaa tttaacataa gttaagaatg gaaaatatta
     6961 tataatgaaa gattatttag aacttttatc tagtgtagga aaattaaaaa aatttcaaaa
     7021 aaatagtatt ttattttatg aaggcgaaga ggctaaaaaa ttttttattt tactcaaggg
     7081 aaaaatacgc atttataaaa gtacatcaag tgataaagaa attactttgc attattttaa
     7141 tcctccaaat tttatagcag aaatgcctgc ttttaaaaaa ttaaattatc ctgctaatgc
     7201 catctttgaa gaagatggag aaattttgga aattgatttt attaattttc aaaatttatg
     7261 cagtgaaaat aaagaattca attttttact tatcagctca ctttttgata aaatcaaaat
     7321 tttagaaaag aaattatctc aaaatgcatt agatttaaga acgagattgt taaagtatct
     7381 tttggaaaat gaaaaaaaat tagatacaat ttcgcaaaaa caaatcgcaa ttgatttaaa
     7441 tgttagagcg caatctttat ctcgagtgtt aaaagagctt aaaatttcag aacttattga
     7501 tacaaaaaaa ggtaaaattg aaattttaaa taaagatatg attataaaag aactttggta
     7561 aaattaaggt agagaatgga ttttgatttt atattagctc aagctcccgc ttttttaaca
     7621 gctgcttggc ttacgataaa actaagcttt tttggaatta ttttttcttt aataataggc
     7681 ttgttttgca ttttaatgag ttattttaaa ataaaaattt
//
LOCUS       DARATF010000074         7471 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.074, whole genome shotgun sequence.
ACCESSION   DARATF010000074 DARATF010000000
VERSION     DARATF010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7471
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.074"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..458
                     /locus_tag="SB502_001363"
     CDS             <1..458
                     /locus_tag="SB502_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0434800.1"
                     /translation="YKIEDFEFCDGIFELCRYFLAKKYLLFIATNQSGIARGYYKESD
                     FFKLCDYMLKEFTKQGIKIDKIYHCPHLEGCECRKPKAGMLLKAKDEFNLDMKNSIFI
                     GDNLSDMQAGLNANIGTLVLVNEEKKEGDFFRQFKNLKEILSFFKEKDI"
     gene            459..1412
                     /gene="rfaD"
                     /locus_tag="SB502_001364"
     CDS             459..1412
                     /gene="rfaD"
                     /locus_tag="SB502_001364"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEG0434801.1"
                     /translation="MRVAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVINANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYQPKFSLEEGIKDYLDEIKRLFEKEVNA"
     gene            1405..2790
                     /gene="rfaE1"
                     /locus_tag="SB502_001365"
     CDS             1405..2790
                     /gene="rfaE1"
                     /locus_tag="SB502_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEG0434802.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDKSGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDISEILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKAVI
                     KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFSLRYSIITLSEAGIALFNEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIF
                     KACELANEAAAVVVSKIGSVSVSFDEIRSFKSMSFEKKIKNKEELLTLLKQNDKKIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILVKGADYKDKLVVGSNLISRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            2787..3347
                     /gene="gmhA"
                     /locus_tag="SB502_001366"
     CDS             2787..3347
                     /gene="gmhA"
                     /locus_tag="SB502_001366"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEG0434803.1"
                     /translation="MINLVEKEWQEHQKIVQESEILKGQIAKIGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNENDVLIGISTSGKSLNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDEGF"
     gene            3347..4111
                     /locus_tag="SB502_001367"
     CDS             3347..4111
                     /locus_tag="SB502_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEG0434804.1"
                     /translation="MKVFIINLERSLDRKEHMKKQIQKLFEKNPSLKNKLEFIFFKAI
                     DAKNKEHLEFKDHFPWWGSWVLGRELSDGEKACFASHYKLWQECVKLDEPIIILEDDV
                     EFSDEFLIMGQEYIDELLKSKYEYIRLCYLFDKRLYFLSEGGYYLSFEKLAGTQGYVL
                     QVSAAMKFLKYAKNWIYAVDDYMDMFYKHNVLNIVKKPLLLKHDCRIESSISQARRLF
                     LKAKFYRKIIREIFRLYRNILKLSYTFYIKKKLDIS"
     gene            complement(4097..5047)
                     /gene="waaF"
                     /locus_tag="SB502_001368"
     CDS             complement(4097..5047)
                     /gene="waaF"
                     /locus_tag="SB502_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEG0434805.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTAL
                     FKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLV
                     HLNLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI"
     gene            5106..5915
                     /locus_tag="SB502_001369"
     CDS             5106..5915
                     /locus_tag="SB502_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0434806.1"
                     /translation="MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDN
                     SLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACEI
                     TFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKC
                     FRKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYEN
                     KNKEILNQNYYDKKKSNELIRKLSLDFENDTFHQKLFEVLKKEEMDLKNRI"
     gene            5969..6855
                     /locus_tag="SB502_001370"
                     /pseudo
     CDS             5969..6855
                     /locus_tag="SB502_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049889.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6848..>7471
                     /locus_tag="SB502_001371"
     CDS             6848..>7471
                     /locus_tag="SB502_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0434807.1"
                     /translation="MPKISIILPTFNVEKYIARAIESCINQTFKDIEIIVVDDCGSDK
                     SIDIAKEYAKKDERIKIIHNEKNLGLLRARYEGVKAANSLYIMFLDPDDYLELNACEE
                     CVRILNTEKESDFIWFDFIYKRISGVINRGNFLQDQTFTIFEYCENIIIQNKNICYWN
                     LCSKLIKTEIYLASFSFLEKEILNTRLIMAEDALIYFFIILNCGKITT"
BASE COUNT         2683 a          788 c         1390 g         2610 t
ORIGIN      
        1 tctataaaat agaagatttt gaattttgtg atggaatttt tgaactttgt agatattttt
       61 tagctaaaaa atatttgctt tttatagcga caaatcaatc aggcattgca agaggatatt
      121 ataaggaaag tgattttttt aagctttgtg attatatgct taaagaattt actaaacaag
      181 gtataaaaat tgataaaatt tatcattgtc cgcatttaga aggttgtgaa tgtcgcaaac
      241 ctaaagcagg aatgctttta aaagcaaaag atgagtttaa tttagatatg aaaaattcta
      301 tttttatcgg agataatcta agcgatatgc aagcagggtt aaatgctaat attggcactt
      361 tggttttagt aaatgaagaa aaaaaagaag gcgatttttt tagacaattt aaaaatttaa
      421 aagaaatttt gagttttttt aaagaaaagg acatttaaat gagagtagca atcacaggtg
      481 gtgcaggatt tataggttcg caactggctt taaatttgca agaaaaacat gaaattttaa
      541 tcattgataa aatgcgtagc agtgcgactt ttgaaaatgg aaatttacaa agttttggac
      601 attttaaaaa tttacttgaa tttgatggag aactttttgc aggtgatatt aacgatgaaa
      661 aagttttaaa aaagattgaa gattttaagc cagagattat ttttcatcaa gcagcaattt
      721 cagacactac agtttttgat caaactaagg ttttacaaac caatttaaat acttttaaag
      781 attttataga acttagcata gatcttaatg caaagcttat ttatgcaagt tcagcttcgg
      841 tttatggtga tgcaaaaagt ccacaaactg taggtaaaga tgaagagcca aaaaatcctt
      901 atgctttttc aaaattgatg atggataagt tagcgaaaaa atattacgat aaagctcatt
      961 tggtaggact tagatatttt aatgtttatg gaaaaggcga attttataaa aacaaaaccg
     1021 cttctatggt tttgcaattt ggccatcaaa ttttagcagg aaaaaatcca cgattgtttg
     1081 aaggaagtga tcaaatttat agagatttta cttatattaa agatgttatt aatgccaatt
     1141 taatcgccct tgattcaaaa tgcggggttt ataatgtagg cagtggtaaa gcaagaacct
     1201 ttcaagatat agttgatatt ttgcaaaaag agttaaagac tgatttgcct tgtgaatata
     1261 tcccaaatcc ttatgtaaaa tcttatcaat tccatactga agcaaaacta gatcaaactt
     1321 gggattatca gccaaaattt agtcttgaag aggggattaa agattattta gatgagataa
     1381 aaagactttt tgaaaaggaa gtaaatgctt gagtttttaa gccagcaaaa acctaaaatt
     1441 ttaattatag gggattttat ggtggataat tacacttggt gtgattgttc gcgtatcagt
     1501 cctgaagccc ctgttttggt agctaaaact cttaaggaag ataaaagatt aggcggggct
     1561 gcgaatgttt atgcaaattt aaaaagttta ggggctgatg tttttgcgct tggtgttgtg
     1621 ggtgatgata agagtgggaa atttttacaa gaaaatttaa aaggagaatt tttgatccaa
     1681 aaaggacgca aaaccccttt taaaaatcgc attatggcgc acaatcagca ggttttaaga
     1741 ctagatgaag aagacataag tgagattttg cttgaaaatg agcttattgc tttgtttgat
     1801 gaaaagatta aagattttaa agctgtggtt ttaagcgatt atgctaaggg tattttaacg
     1861 cctaaggttt gtaaggctgt gataaaaaag gctaaggctt taaatatccc tgttttagtt
     1921 gatcctaaag ggagtgattt tagtaaatat agcggtgcaa ccttgctcac gcctaataaa
     1981 aaagaagctt tagaagcttt gaaatttgaa aatttagagg gtgaaaattt agaaaaaggg
     2041 attaaaaaat taaaagaaga tttttctttg cgttattcta tcatcactct ttcagaagcg
     2101 gggattgcgc tttttaatga gggtttaaaa atcgcacctg ctaaagcctt agaagtttat
     2161 gatgtaacag gagcgggcga tagtgtgatt gccgttttgg ctttttgttt ggcaaatgaa
     2221 attgaaattt ttaaagcttg tgaacttgcc aatgaagctg cagccgttgt agtaagtaaa
     2281 ataggtagtg tgagtgtgag ttttgatgag attagaagtt ttaaaagtat gagttttgag
     2341 aaaaagatca aaaataaaga agagctttta acgcttttaa aacaaaatga taaaaagatt
     2401 gtttttacaa atggttgttt tgatatcgtg cattttggac atataaaata tcttgagaaa
     2461 gctaaaagat tgggcgatgt tttgattgta ggtttgaact cagatgcgag tgtgaaaaga
     2521 ctcaaaggtg agagtcgtcc tgtaaattca gagtttcaaa gagcttgtat gttggcagct
     2581 ttttattttg tagattttgt agtgattttt gatgaagaca cacctttaga acttataagc
     2641 tttttaaagc ctgatatttt ggttaaagga gctgattata aagataagct tgttgtaggt
     2701 tcaaatttga tttcaagagt tgaattaatc gattttgaag aaggatttag tacgagtaag
     2761 attatagaaa agattaagga taaaaaatga taaatttagt agaaaaagaa tggcaagaac
     2821 atcaaaaaat cgttcaagaa agtgaaattt taaaaggaca aatcgctaaa ataggcgagc
     2881 ttttatgtga atgtcttaaa aaaggtggta aaattttaat ttgcggaaat ggtggaagtg
     2941 cagctgatgc acagcatttt gcagctgaac ttagtgggcg ttataaaaaa gaacgcaagg
     3001 ctttagcagg tatagcgctt acaaccgata cttcagcgct tagtgctata ggaaatgact
     3061 atggttttga gtttgttttt tcaagacaag tggaggcttt aggaaatgaa aatgatgttt
     3121 taatcggcat ttcaaccagt ggaaaaagtc tcaatgtttt agaagctttt aaaaaagcaa
     3181 aagaacttaa tatgctttgt ttagggctta gtggaaaggg cggtggaatg atgaataagc
     3241 tttgtgatca taatcttgtt gtgccaagcg atgatacggc tagaattcaa gaaatgcaca
     3301 ttttaatcat acacacgctt tgtcagatca tcgatgaggg tttttaatga aagtttttat
     3361 cataaattta gagcgttctt tagatagaaa agagcatatg aaaaaacaaa ttcaaaagct
     3421 ttttgaaaaa aatcctagtt taaaaaataa attagaattt attttcttta aagctattga
     3481 tgctaaaaat aaagaacatt tggaatttaa agatcatttt ccttggtggg gttcttgggt
     3541 gctgggcaga gagctttctg atggagaaaa agcttgtttt gctagtcatt ataaactttg
     3601 gcaagaatgt gtgaagcttg atgagcctat aatcatccta gaagatgatg tggaatttag
     3661 cgatgaattt ttaataatgg ggcaagaata tatagatgag ctattaaaga gcaaatatga
     3721 atatataaga ctttgttatt tgttcgataa aagattgtat tttttgagcg agggtggata
     3781 ttatttaagt tttgaaaagc ttgctggaac tcaaggttat gtactgcaag taagtgctgc
     3841 aatgaaattt cttaaatatg ctaaaaattg gatctatgcc gtagatgatt atatggatat
     3901 gttttataaa cataatgtgt taaatatagt taaaaagcct ttattattaa aacatgattg
     3961 tagaatagaa agttcaattt ctcaagctag acgtttattt ttgaaagcta aattttacag
     4021 aaaaattatt agagaaattt ttagacttta tagaaatatt ttaaaactat cttatacttt
     4081 ttacattaag aaaaaattag atattagtta aattttgaat cgcttttaca atcacttcag
     4141 gctttaaatc tttcatgcat ttgtggtgtt ttaaagggca ggttttttgc atacaaggca
     4201 tacaagctag atttaaatgc actaatgttg cgttttcatt ttgccaaggt gaggtttgag
     4261 taaattttgt agggccaaaa atagccacgg tttttacctt ataaactgca cttatgtgca
     4321 tagggccact gtcatttgtg atgaaaagat cgcaaaaagc gatattttga caaagggttt
     4381 tgatggtagt tttattgcaa agatttttta cttttatgtt ttgttctttt aaaatttgat
     4441 aaatttcatt acaaagttct tgttcggctt ttcctgcgcc aaagattaaa atctcatgac
     4501 tttggctgaa atttaaagcc actttagcaa aataactcgc atcccatctt tttgcacttc
     4561 caaagcttgc accaggattg agtcctagaa tttttttgcc attttttaag acaagagggc
     4621 tttgaaattt tagcttaaag ggaagtttta agtctttaag gtgagctttt atgtgaagtg
     4681 agttttctat aaaataaagg tattttaaaa cttgatgttc ttctttgtgc ttgtttttgt
     4741 caaaaaaata tctttgtttt gttttaagaa tatgtaagat aatcttagaa gaaaacgcag
     4801 atctaaaagc aaagctaaaa tcgatcttac caagttcttt gcgtaaagat agggcttgtt
     4861 tgtagcggga ttgtttattt tctatgatga ttttagaatt aggaaattct ttaaaaagtg
     4921 ctgtggaaac caaagatcca taaaggataa attgggcatt tttaaaatgt tcttttataa
     4981 cgtataaagc aggtgaagcc atcaccgcat cgcctagcca agtgggaagg tgtataaaaa
     5041 ttttcataaa tttcctaaac tttgatagaa ttgtttttat tattttaaca aaatttagga
     5101 aaaatatgcc acaactttct atcataatcc cgctttttaa ttcttgcgat tttatctcaa
     5161 gagctttaca aagttgtata aatcagactt taaaagatat tgaaattttg attatcgatg
     5221 ataaaagtaa agataatagt ttaaatatgg ttttagaatt tgccaaaaaa gatccaagga
     5281 taaaaatctt tcaaaatgaa gaaaatttag gcacttttgc aagtagaaat ttgggggttt
     5341 tgcattctag ttctgatttt ataatgtttt tagatagtga tgatttttta acactcgatg
     5401 cttgtgaaat aacatttaaa gagatgaaaa aaggttttga tttgctttgt tttgatgcct
     5461 ttgtgcatag agtaaaaacc aaacaatttt atcgttttaa acaagatgaa gtttttaatc
     5521 aaaaggaatt tttagatttt ttaagtaaac aaaggcattt ttgctggtcg gtttgggcga
     5581 agtgctttag aaaagatatc atcttaaaaa gttttgagaa aattaaaata gatgagcgtt
     5641 taagttatgg cgaagatgtg cttttttgtt atgtttattt tatgttttgt gagaaaatag
     5701 ctgtttttaa aacttgcatt tatcattatg aatttaatcc aaatggaaga tatgagaata
     5761 aaaataaaga aattttaaat caaaattatt atgataaaaa gaaaagtaat gaacttataa
     5821 gaaagctttc tttagacttt gaaaatgata cctttcatca aaagctattt gaggttttaa
     5881 agaaagaaga gatggattta aaaaatagaa tttaagatta gattttatat aattaagttt
     5941 ttatattttt aatattaaaa ggctaacaat gactgaaatt tcaagttttt ggtatactcc
     6001 taaaggctat aagggtatag gtttaatgga aattcttacg attaaatctt ggcttgatca
     6061 tgggtataaa ttccatctat atacttataa tttagaagat aaaatttttt taaaattcca
     6121 agagctgttt gataatttta tacttaaaga tgcaaatgaa atcatacctt ttgaagaata
     6181 ttttagcgat gataggggag ctggagtagc tgctttttca gattttttta ggtttaatct
     6241 actttatctc aggggggggt atgggtggat cttgatatgg tgtgtttaaa ccattatgat
     6301 tatgataaaa aagaatatat tttttctaag gaaattgata atgatctaag caaagctaga
     6361 atcacaactt cactccttaa atttccaaaa caaagtgaat ttggaaaatt aattatagat
     6421 gaagcaaaaa agattgttga tgataacaaa ataattcctt ggggtattat aggtccttgg
     6481 tttttagcta aatgggttaa agaatatgat ttagaaaaac atgctctaga ctataaagat
     6541 acttgtcaaa tttcttgtgg taatactaga gattttatag ataaaaaaat tttcgatgaa
     6601 aacagacttt gtttgcattt attttctgaa atgtggagaa tttataaaat gaataaaaat
     6661 catttttata aatcgtgtat ttatggattt ttacttcaaa agcacaatat ccttgattta
     6721 tgtcttaaat taaattataa tcttagtttt tgcgataaac attatgataa attccttcct
     6781 tttattaata taaaaaataa aataagattt tattttcgcc acccaaaaaa gatttttaag
     6841 aaaaacaatg cctaaaattt caatcatctt gccaactttt aatgtagaaa agtatatagc
     6901 aagagcaata gaaagctgta tcaatcaaac ttttaaagat atagaaataa ttgtagtgga
     6961 tgattgtggg agtgataaaa gtatagatat agctaaagaa tatgccaaaa aagatgaaag
     7021 aataaaaata attcacaatg aaaaaaattt aggtctttta agagctagat atgaaggagt
     7081 taaggcagct aattctttat atatcatgtt tttagaccct gatgattatt tagaacttaa
     7141 tgcttgtgaa gagtgtgtga gaattttaaa cactgaaaaa gaaagtgatt ttatatggtt
     7201 tgattttata tataaaagaa tttcaggggt tataaatagg ggaaattttt tacaagatca
     7261 aacttttact atttttgaat attgtgagaa tatcataatt caaaataaaa atatctgtta
     7321 ttggaatctt tgttctaaac ttattaaaac agaaatatat ttagcatctt tttctttttt
     7381 agaaaaagag atattaaata ctagattaat tatggcagaa gatgcattaa tttatttttt
     7441 tattatttta aattgtggaa aaattactac t
//
LOCUS       DARATF010000075         7379 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.075, whole genome shotgun sequence.
ACCESSION   DARATF010000075 DARATF010000000
VERSION     DARATF010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7379
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.075"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(31..960)
                     /locus_tag="SB502_001372"
     CDS             complement(31..960)
                     /locus_tag="SB502_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HEG0434808.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSYNADNSNSSFIPFIGVELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYATGNREETDVDRYGFKISQLYESDFGKFTTSY
                     LFSKNKYDKDTIAQSSLKREGYYHEFELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGTNLAFANDYIFTPNLNLSKYEAAGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIILTGIGYKF"
     gene            1114..2490
                     /locus_tag="SB502_001373"
     CDS             1114..2490
                     /locus_tag="SB502_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEG0434809.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVVACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELHEKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKILRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
     gene            2553..3155
                     /locus_tag="SB502_001374"
     CDS             2553..3155
                     /locus_tag="SB502_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434810.1"
                     /translation="MFYTFFVILKQGEKMLKQIAFGSIALTATGYGIKKLYEKLSKPE
                     RKFDTHAIVPSCKDVINTEEYKLKRELEVEQKKNQIQEFLCECMECYSGFSKYFNSKE
                     FLEFEQNFTSKNNHKTEFLLSSYKDQMIKVIDYAKKFKCLSAFLETQSEKNDLAVVKM
                     ISESMERKIQRFYLQTKFQTFPQYIFPSVWSSPMWDKQWE"
     gene            3146..3352
                     /locus_tag="SB502_001375"
     CDS             3146..3352
                     /locus_tag="SB502_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434811.1"
                     /translation="MGIILRILSLIAGFVTIVLMCGLYFIAFMVFVGIAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
     gene            3431..4158
                     /locus_tag="SB502_001376"
                     /pseudo
     CDS             3431..4158
                     /locus_tag="SB502_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000323697.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3944 domain-containing protein"
     gene            4177..5643
                     /locus_tag="SB502_001377"
     CDS             4177..5643
                     /locus_tag="SB502_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434812.1"
                     /translation="MENICQFIIENIDKNSLNTKKIKLVFNMQEQEITTISKIFKVSS
                     EHIIAFYDTSTSFNYFSKTTGICFTGKEVIFKRKEDEVLMKINYEDFKEANKSLPEKT
                     TTLQDIKFPISFHNLGTSYLSFDDFKKKNYIEENDELIINFLHILTSKNNIESFKNES
                     MFPQALEKTNESIKENYIKVIIKIILDQYGFLDEKRSIKIFALMNKINVASETRYKIQ
                     DFLHNKHSSFEDLLNIIKQESRFMQFKYILISLIKDLIDIDFEDNKIYNFLYENKDIF
                     KIKDLKEIYWIKEIIKKEYQIILDDNKEIQQIFNFISETATKNNISLNGLYLSGMTIG
                     MSVSIMELLGFGELIKLPLIDSSKKYHNKNKQQLRLFIIQEILKENQKTITQIIDIIN
                     NLIEQCNTNTQNLQELIKLLKLASKNNETFKEREKLLYCPETLSLITINNHLKEDDIQ
                     FIEQYYTYNQNTHEYERNDNLSSSDLEKLSNFFKLKNL"
     gene            5969..7126
                     /locus_tag="SB502_001378"
     CDS             5969..7126
                     /locus_tag="SB502_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002868082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434813.1"
                     /translation="MITYSNLSDVKKRIEDEFTHRNAECDKYDYLIAITCGAIAGIMD
                     IFLVGNPKDSYLGKKVDKTVEKMTQKFAQLCGWDKQKALDKNKDLTKSAIAFLENKFK
                     INYDQTTTNGRNGTNGKVDNLSMKNHHLKSIGHSPDIFGLFVSIVNQFTNTSTFVSNG
                     KIITIDTNTFELQGGNFIAKIFCGFFNWFGHLASDWCGSSGGKERGAGIPMPFYNLFL
                     LCDFGNFGQHRQTLAQIATQVFEQGYDLRHGVTMSIPVMINEMLIRFIYIIKAKFYHK
                     KEWKECIPKDDIPELNKMLLIGSGTFLLIDTGGAWIKSKNPITNPVVFLSEINLINVI
                     RFSTLILKEIYILYNNGKIDNKKLEKYLDDTCKILLIEAHNKSKPFKEILK"
     gene            7135..>7379
                     /locus_tag="SB502_001379"
     CDS             7135..>7379
                     /locus_tag="SB502_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434814.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNFLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISK"
BASE COUNT         2902 a          952 c         1113 g         2412 t
ORIGIN      
        1 ttttatcaaa ggagcttttt ttataatttt ttagaattta tatcctatac cagttaggat
       61 aatttgatag gtttcatcat aaaatcctat atcgctattt cttttttcta tgccataatt
      121 tgcaaaacca taaagtccgt tataacccaa aaattgattt ttaacaactt ttagattaag
      181 cttaactata ttaccatctt gttttttgtg gaagatagga tcagttcctg ctgcttcata
      241 tttactaaga tttaaatttg gagtgaagat gtaatcatta gcaaaagcca aatttgtccc
      301 tatgctaaaa ccatatcttg aatagctttg agcttttccg tctgcatcat tgtaatcata
      361 atttaaccct aggtttaata agctataatt atagtttaat tcaaattcgt gataataccc
      421 ctcccttttt aaagagcttt gtgcgatagt gtctttatca tatttgtttt tgctaaataa
      481 atatgaagtg gtaaatttcc caaaatcact ttcataaagt tgagagattt taaaaccata
      541 tctatcaaca tcagtttctt ctctatttcc tgttgcataa ggatttgcat aagctttttc
      601 tcttaaagag gaaatcacag aaaaagaagt gctaaaacgc tctaaataag ctctttcgta
      661 gcctaaagct ataccgctga tatctcttcc attgtagttt ttaataaaaa ttctatcatt
      721 atctataaga ttaccatagt aaagttctac accgataaaa ggaatgaaag aggagtttga
      781 attatcagca ttgtaactgc ttagataatc gctgtttgcc aaggttgaaa tattactttt
      841 aatatccctt gcacccacac ctatgcttaa atttccacta aaaccttctt gaaattctac
      901 agccgtagct gattgggtta aaatggaggc taaaacacag gaaaataaat attttttcaa
      961 atgttctcct tgaaatgttt gttgtttgta attaaattac atttataatt gtaactaata
     1021 ttactttaaa tatttataaa aaaattaagt tttataattt aagttttttt agatagaatt
     1081 tttagaatta atttatactt ataaggaaat ttagtgcagc aagagtatta tgacttggat
     1141 ttagaacgag ctattttaag cagttgtatc atgagtgaag aagcttatgc tagtatagca
     1201 ggtgatatta gcccaaaaga ttttagtctt aaagctcacc aagatatttt taaagcggtt
     1261 gtagcttgta gtaataacaa agagcccatt tctgtaagtt ttttaagaaa acataaaaaa
     1321 atagatgagc aaattttagc agaaattctt gccactcctt ctatgataga tttgcctgct
     1381 tatgtaaatg aacttcacga aaagtccgta aaaagacaac tcttgagttt tgcacatctt
     1441 ttgccaactc gtatcaatga agatcgtgct gtaagtgaaa tcgcagatga aattggtaaa
     1501 gaaattttta gcattacaaa tcgtgtgaat tctagagata ttaaagatgt tgatatggta
     1561 atatcagaac tttttgaaga atttaaaaag caaaaaactt tagaaaataa aggtattata
     1621 gggcttgata caggttttga aggtctaaat aaaatgacaa aaggttttaa agggggtgaa
     1681 cttataataa tcgctgcgcg cccaggtatg ggaaagacaa ctctttgttt aaatttcatt
     1741 gacaagattt taagacaaaa aaaaggcgtg gctttgtttt ctcttgaaat gcctgcaact
     1801 caaatcatgc aaagaatgct atcttccaaa acttccattc ctttgcaaaa aattttaact
     1861 gcagatttaa atgatgatga atgggagcgt ttaggagatg cttgtaatga ttatagtcaa
     1921 aagaaattat atatttacga tagtggttat gcaactattg ctgatgtaag ggctatttta
     1981 aggcgtttaa aatctcaaga tgaaagtata ggactttgtg tgattgacta tatagggctt
     2041 atgatgagta attcaaattt taatgataga catttgcaag ttagtgaaat ttcaagagga
     2101 cttaagcttt tggctaggga gcttgatatg cctattatcg cactttcaca acttaatcgt
     2161 ggcttagagc aaagggcaaa taagcgtcct ttgatgagtg atttgcgaga aagtggagct
     2221 atagagcaag atgcggatgc tattttgttt gtatatcgcg atgaggttta tagagaacaa
     2281 gaagaaaaag aaagagagaa taaagctaaa gctgaaggca aagcttatca aaggcttttt
     2341 ataccaaatc ctatgcaaga aaatgctgaa attattgttg gaaaaaatag aaatggacct
     2401 gttggaacta tagaagttgt atttttaaaa gaaaaatctt gttttgtaga taaacctata
     2461 ggctatgaaa ctactgaatt tacaggctag ctttaataaa ataagttttt aatattttaa
     2521 agttattttt tacgacacaa cctgtcgcaa gggtgtttta tactttcttt gttattttaa
     2581 aacaaggaga gaaaatgtta aaacaaatcg catttggtag tatagctctt acagctacag
     2641 gatatggcat aaaaaaatta tacgaaaaat tatccaagcc agaaagaaaa tttgatacac
     2701 atgctattgt tccaagctgt aaggatgtaa tcaacaccga agaatataaa ctcaaaagag
     2761 agcttgaagt cgaacaaaag aaaaatcaaa ttcaagaatt tctttgtgaa tgcatggagt
     2821 gttatagcgg cttttcaaaa tattttaatt ctaaggaatt tttagaattt gagcaaaatt
     2881 ttacctctaa aaataatcac aaaacagaat ttcttttgtc gtcttataaa gatcaaatga
     2941 taaaagtgat cgactatgct aaaaaattta aatgcttgag tgcttttttg gaaacacaaa
     3001 gcgaaaaaaa tgacttagcg gttgtaaaaa tgataagtga aagtatggag agaaaaatac
     3061 agagatttta tctgcaaaca aaatttcaaa cttttcctca gtatattttt ccttctgtgt
     3121 ggagttctcc tatgtgggat aaacaatggg aataatactt agaattttaa gccttatagc
     3181 tggctttgtt accatagtgt tgatgtgtgg tttgtatttt atagcgttta tggtttttgt
     3241 tggcatagcg atacttattt ttctttctat gcaaccttat ccttataata taatattttg
     3301 tgctatatat ttaatcacaa ttttagcgct agtgctatgg cgtaaaactt aaaaatttca
     3361 cttccccctt gactgggggg ggggatttga taaaatacaa agttaaaaat tttaaaaaca
     3421 aggagaaaat atggcctaca gatatgataa agatttagaa ttcttaaaag aattaagcag
     3481 tccagaactc gatgagcttg taaaaatttt aacccatgat aaagacggga aagttcgttt
     3541 tactgaagag ttaaccaata atgatcttta taaaaaacat tatccagatc ataaagaata
     3601 tatcgaactc attttagaag aatttcaaaa atttggagga aatagtattc ttaatatatt
     3661 tcgaggtggt ggagttttat aatgaaattc tacgcgatgt tgtaaaaaaa tttgatgtaa
     3721 aatttgatga aaatgaaagt acaaactcca tagaaacatc acttttatgc aaattaatag
     3781 aagaagagtt aaaaaattct caagatgaaa atacattaag agaacttgta aatattttcg
     3841 aacttggcat ttctaatatt aataaacaaa cagttgtaat gggattgcaa tctctcatta
     3901 aaataggtgg atttaaaagc tatcaaattg cagtaatagt tgcaaatcaa gttatgaaag
     3961 ttttactagg aagaggttta tctcttgcgg caaatgcaac acttacaaga gctttaagtc
     4021 ttttttctgg tccggtaggt tggacaatta tgaccacatg gactgcattg gatttagcta
     4081 gcccagccta tagggtttac tataccagca gtacttcaaa ttataatttt aagactaaaa
     4141 cacaatacaa aaaactaaac acaaggaaat gcattaatgg aaaatatttg ccaatttatc
     4201 atagaaaata ttgataaaaa ttcattaaat acaaaaaaaa taaaacttgt tttcaatatg
     4261 caagagcaag aaattacaac aatttcgaag atatttaagg tatcttcgga acacattatt
     4321 gctttttatg atacctcaac atcctttaat tattttagca aaactaccgg aatatgtttt
     4381 actggcaaag aagttatctt taaaagaaaa gaagatgaag ttttaatgaa aatcaactat
     4441 gaagatttca aagaggcaaa taaatcctta cctgaaaaaa caacaactct tcaagacatc
     4501 aaatttccca tatcttttca taatcttgga acatcttatc tttcatttga tgatttcaaa
     4561 aagaaaaact acatagaaga aaatgatgag cttataataa attttttaca catcttaact
     4621 tcaaaaaata acatagaaag ttttaaaaat gaaagtatgt ttccacaagc cttagaaaaa
     4681 acaaacgaaa gtattaaaga aaactatata aaagttatca ttaaaataat attagatcaa
     4741 tacggttttt tagatgaaaa aagatcaatc aaaatttttg ctctaatgaa taaaattaat
     4801 gttgcttcag aaacaaggta taaaatacaa gattttttac ataataaaca ttctagtttt
     4861 gaagatttgc taaacatcat aaaacaagaa tctagattta tgcaattcaa atatatttta
     4921 atttcactaa taaaagactt aattgatata gattttgaag ataataaaat ttataatttt
     4981 ttgtatgaaa acaaagacat ttttaaaatc aaagacctta aagaaatcta ttggataaaa
     5041 gaaatcatta aaaaagaata tcaaataata ttagacgata ataaagaaat tcagcaaatt
     5101 tttaacttta tatccgaaac agctacaaaa aataatatat cgttaaacgg tttatatctt
     5161 tcaggaatga caattggcat gtctgtatca attatggagt tactaggatt tggggaatta
     5221 ataaaattac cactaattga ttcttcaaaa aaatatcaca ataaaaacaa acaacaatta
     5281 cgtcttttta ttattcaaga aattctcaaa gaaaatcaaa aaacaattac ccaaattatt
     5341 gatatcatca ataatttaat tgagcaatgt aatacaaata cacaaaattt acaagaatta
     5401 ataaaattat taaaattggc ttcaaaaaat aatgaaactt ttaaagaaag ggaaaaactt
     5461 ttatattgcc cagaaacgct ttcattgata acaataaata atcatctaaa agaagatgat
     5521 attcaattta tagaacaata ctatacctat aatcaaaata ctcatgagta tgagcgcaat
     5581 gacaatcttt cttcgtcaga tttagaaaaa ctttcaaatt tttttaaatt aaaaaatcta
     5641 taaggataat tttatggata aaatacaaga aaacaccaaa atagaaaagg ctatattagc
     5701 cgaaaaacaa caaatctttt taatacaaaa taaattatcc gaaattgaaa aaaatatcaa
     5761 agaacaatgt ttaaccatag aacagattca aaatagtatc acagaaaaaa atcaaaattt
     5821 gagcaatata gaatataagg aaaatcaatc aatcgattca ttggaaaatt tttttaacac
     5881 ttatagcaat tgggaaacat attgtcaaga aattgaaaaa tatttaaact taaaaaaaat
     5941 aaactcaaat gaagattctt taaaattttt gatcacttat tcaaatttat cagatgttaa
     6001 aaaaagaatt gaagatgaat ttacccatag aaatgcagag tgcgataagt atgattattt
     6061 aatagcaata acatgtggag caatagctgg cattatggac atttttttag ttggaaatcc
     6121 taaagatagc tatctaggaa aaaaggtaga taagacggta gaaaaaatga ctcaaaaatt
     6181 tgcacaatta tgtggttggg ataagcaaaa agcattagac aaaaacaaag atttaactaa
     6241 aagtgctata gcgtttttgg aaaacaaatt taaaattaat tatgatcaaa ctactacaaa
     6301 cggaagaaat ggaacaaatg gaaaagtaga taatttaagt atgaaaaatc atcatttaaa
     6361 aagcataggt cactctccag atattttcgg gttatttgta tctatagtaa atcaatttac
     6421 caatacttca acttttgtta gcaacggaaa aatcataacc atagatacaa atacttttga
     6481 attacaaggg ggaaatttta ttgctaaaat attttgtgga ttttttaatt ggtttggaca
     6541 tttagcatct gattggtgtg gatctagtgg aggaaaggaa agaggtgcag gcattcctat
     6601 gcctttttat aatttatttt tactttgtga ttttggaaat tttggacaac atagacaaac
     6661 actagcacaa attgcaaccc aagtttttga acaaggatat gatcttaggc atggagttac
     6721 tatgtctatt cctgttatga ttaatgaaat gctaattcgt tttatatata taataaaagc
     6781 taaattttac cacaaaaaag aatggaaaga atgtatacca aaagatgaca tacctgaatt
     6841 aaataaaatg cttttaatag gatctggtac ttttttatta attgatactg gtggtgcatg
     6901 gataaaaagt aaaaatccta taacaaatcc ggtagttttc ctttctgaaa tcaatttaat
     6961 taatgttata agatttagca ctttaattct taaagaaatt tatatattat ataataatgg
     7021 aaaaatagat aataaaaaat tagaaaaata tctagatgac acttgtaaaa ttttattaat
     7081 tgaagctcat aataaatcta agccttttaa agaaatccta aaataaggca aagcatgaac
     7141 caccttttaa tcctttataa tccctactat caagaagatg tcatcaagca acatttaagt
     7201 attttacaag aaaaatccca agttgccttt ggcaaaatca aatcaaaact caacgatcaa
     7261 gaaaagcaaa atttcttaga agaaatttac caaagtacaa atgaagaaaa tttcttgcaa
     7321 ctttttttaa gcgattatgc taatttattt gtcgctaagg tggtaaaaat ttctaaaaa
//
LOCUS       DARATF010000076         7265 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.076, whole genome shotgun sequence.
ACCESSION   DARATF010000076 DARATF010000000
VERSION     DARATF010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7265
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.076"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(367..1140)
                     /locus_tag="SB502_001380"
     CDS             complement(367..1140)
                     /locus_tag="SB502_001380"
                     /inference="COORDINATES: protein motif:HMM:NF012993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEG0434815.1"
                     /translation="MKIALAQIKTSPKWQENLEKILKLLNETKKQEAHLVVFPETCMA
                     FVPSDGSVNFQDIAQDIQDEFVQTILKESEKLKLAVVFGFFEKGAIKVKNCVLFVNSG
                     KILHKYHKTHLYNAFSYNESKDIEEGQNPIKAFYTPWGKMGMMVCYELRFPEIARSLA
                     LQGAKLILVPTAWVDGKLKKEHFSLLSRARALENTVFLCACSQTKNIYTGESALISPL
                     GIELIKMGEEEALAFVQIDLEEIAQLRKTLPCLEQRRKV"
     gene            complement(1147..1994)
                     /locus_tag="SB502_001381"
                     /pseudo
     CDS             complement(1147..1994)
                     /locus_tag="SB502_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
     gene            complement(2067..2648)
                     /locus_tag="SB502_001382"
     CDS             complement(2067..2648)
                     /locus_tag="SB502_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0434816.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNYALEILKTLGYEVDQTHI
                     DQGYDPKEEMQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIFA"
     gene            2748..3095
                     /locus_tag="SB502_001383"
     CDS             2748..3095
                     /locus_tag="SB502_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEG0434817.1"
                     /translation="MTKENSPCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSK
                     WGKKDKKGKKCLN"
     gene            3083..3531
                     /locus_tag="SB502_001384"
                     /pseudo
     CDS             3083..3531
                     /locus_tag="SB502_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
     gene            complement(3533..4609)
                     /locus_tag="SB502_001385"
     CDS             complement(3533..4609)
                     /locus_tag="SB502_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEG0434818.1"
                     /translation="MQYKILENNRIASKGYAMLSKDAKFTAFEFSRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVNS
                     CGECDACKRSQEQFCENGKTIFTYNSCDVFHGNENTYGGYSNNIVVSEKFAICVPKNA
                     PMDKVAPLLCAGITTYSPLRFSKIKEGSSVAIAGFGGLGMMAVKYAVKMGAKVSVFAR
                     NENKKADALAMGVSSFYTSCDKNAVKERFDLIISTIPTPYNPAVYLDLLKFGGEMAIV
                     GLPPVEDKVNIGINELVHKAGKKVYGSLIGGIAETQEMLDFSLKHEIYPETELITPQE
                     IDKAYENLTSGKAKFRYVIDMTKE"
     gene            4739..7048
                     /locus_tag="SB502_001386"
     CDS             4739..7048
                     /locus_tag="SB502_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEG0434819.1"
                     /translation="MQNLYSEDDTRVKFIDAKLYDSSWNEENIKRNYYFTDGRKLLGG
                     KRAQRKFADYLLRYEGNNLAIIEAKKFSKDPLDGLSQGIEYAKILNVPFVYSSNGEKI
                     YEYDMRSHSGEYIDKFPSPKELFDRIFGNLKEWQYRLLTQKPMYIPQKELRYYQKIAI
                     DKVIEAIINNKNRILLTLATGTGKTTIAFNLCYRLLEARWNKENKDQKPKILFLCDRV
                     SLRDQALGEFNPIESDCKAISAEEIKKNDGKIITNANIFFGIYQSLAANSKEQENIQE
                     EQESKFYLQYPKDFFDLIIIDECHRGGANEEGSWRAVLEYFSYATQLGLTATPKKEEN
                     IDTYEYFGESVYDYSLKSGIEDGFLTPYKVKLIKTTLSDGYTYNPDDLIQGELEKGFY
                     KQSEFERNIFLPNYNDFIAKKILELINPMDKTIIFCVNQAHANEVKRAIDKYKSVKRD
                     DYCVRVTSDEGKIGLDYLKLFQDNDKSYPVILTSSKMLTTGVDAKNVRNIVLLANIGS
                     MVEFKQIIGRGTRVYEGKDFFTILDFVGATKLFYDPKWDGEKIEELKEQDEKEKITKE
                     HIKQTKEESKEKKSVTIHLKGTKLKVLDITTTYVGAQGKPLSTKEFLEFLIGKLGEYY
                     DDEAKLREIWSDQKNRERFLKALANDGVDEDALKDLREIFQKDCDIYDVLAHLSFNAE
                     IKTRQERVLQVENGEFLKRFQKEKAIKFIEFLLGRYQQYGIKDFDDGLKPLIELSSLG
                     NVRELADEFGGLEILKQSFDDLQREIYLN"
     gene            7059..7232
                     /locus_tag="SB502_001387"
     CDS             7059..7232
                     /locus_tag="SB502_001387"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434820.1"
                     /translation="MDILISIISGLVGGFVGSCFALYLRFNKKTRKNINKVSLKLSSF
                     LNFGSIKQENSNK"
BASE COUNT         2571 a         1112 c         1182 g         2400 t
ORIGIN      
        1 aaataagaaa aaatgaaaca aatataaatc caatccatgc tattgaaaaa atattagaaa
       61 aaatcaaatc cttgttgaaa tcaggaataa aatgggcatt gaaaatataa tactcagtta
      121 aaatccaagc tcccaaagca aaacttacaa aaataatact agtgcttatc acccctaaat
      181 atttttttaa aaagtccatt atcaaaaaaa attgttgctt aaggtttttt aattcattga
      241 tgttttcttg attcataatc tgccttataa aaaaatgatt ttacacaaaa atactttttc
      301 aatcctttaa aaaatgcttt aatattaaaa attttaaaag attttcaagg ctaaaaagcc
      361 ttgagtttat actttgcgtc tttgctctaa gcaaggcaaa gtttttctta gttgagcgat
      421 ttcttctaaa tcaatttgaa caaaggctag agcttcttct tcacccattt tgataagttc
      481 tatgcccaaa ggacttatga gtgctgattc tcctgtgtag atattttttg tttgagaaca
      541 agcgcataag aatacagtat tttccaaagc tctagcgcga gaaagtaaag aaaaatgctc
      601 ttttttaagc tttccatcta cccaagctgt aggcactaag atgagttttg caccttgtaa
      661 ggctaagctt ctagcgattt ctggaaaacg tagctcataa caaaccatca tgcccatttt
      721 accccaaggc gtataaaaag ctttgatggg attttgtcct tcttctatat ccttgctttc
      781 attataagaa aaggcattgt aaagatgggt tttatgatat ttgtgaagaa tttttcctga
      841 attgacaaaa agcacacaat ttttaacctt gattgcgcct ttttcaaaaa aaccaaaaac
      901 cacagcaagt tttaattttt cactctcttt tagtatggtt tgaacgaatt catcttgtat
      961 atcttgagct atatcttgaa aattcacact cccatcactt ggcacaaagg ccatgcaagt
     1021 ttctggaaaa actaccaaat gagcctcttg ttttttggtc tcatttaaaa gttttaaaat
     1081 tttttctaaa ttttcttgcc atttagggct tgttttaatt tgtgctagtg cgattttcat
     1141 catatcttaa tatttgttta atcttgataa aaagcttact ctttcagtat catgatggtt
     1201 tgaaatttga tacgcatttg aagctaaaga agcgattttt tctttatctt gcgtgtctaa
     1261 gctaaaatca aaaacattaa aattttgttt cattctgtct ttacttagag tttttggtat
     1321 cacggcgatt tctctttcta tgagccatct aagaacgact tgagctacgc tttttccatg
     1381 ctttgcacca atttgctgca aagtgatatt attaaaaaga ttattatgcc cttcagcaaa
     1441 agaagcccaa acttgcatga taatacctag cttattcata gtattttgag ccgagttttg
     1501 ttgataaaaa gggtggcatt ctacttgatt taacatgggt ttgatttcat tgtgtaagca
     1561 aaaatcaaca agacgatcag ggtaaaaatt gctcacacct atggctttac taagtccttc
     1621 tttataaatt tcactcatca cacgccatgc tccataagta tcattaaaag gttggtgtat
     1681 gagataaaga tcaatataat caagccctaa ttttttaagg ctttcttcaa aggccttttt
     1741 tgctagcttt tcgtttgttt tatccaccca aagtttagtg gtgataaaaa gttcttcgcg
     1801 ttttatcccg cttgctttga ttgcagatcc tacggcctct tcattattat aaattgaagc
     1861 tgtgtcgata agacgatatc caacgcttaa agcatcttct acgcaagctt gggggttttt
     1921 ttaggatcga tttgaaatac tccataacct aaaataggca ttttattacc atttgctaaa
     1981 gttaaatatt gcatattatc tcctttaatc ataattgttt atattatact atgcaaggct
     2041 aataaatttt aaaaagttat tatttctcaa gcaaaaattt ttttcaagtg tagttcatac
     2101 tcgtttagat atttttccac ttgaggattt tttaccacat cattacacat aaaagttggt
     2161 aaagctttca tacctataaa ttcatgagcc ttatgcaaat gccaatacac catatctaca
     2221 ccctttcctt caaaaaattc atttttatca ttaaaggctt caagaggtgc attccaagtg
     2281 agagaaaaca tgtatttttt accatgatct aaaccacctt ttccgtagtt tttactagga
     2341 ttttcatgag ttcttccatc atttttaaaa agcactccag cacccaaacc aaacacttca
     2401 tcgatatatt ttttaactat ccaaggctcc cccatccacc aagctggcat ttgatagatc
     2461 acagcatcag cttttataaa tttttgcatc tcttctttag gatcatatcc ttgatctatg
     2521 tgagtttgat ctacctcgta tcctagtgtt tttaaaattt ctaaagcata attatgcaat
     2581 gtcaaattaa gttgtccttt tgaatttcca aattctttag caccattaag caagagtata
     2641 tttttcattt ttatcctttt ttaaatttta tgatacaatt ataacttagc ataatatcat
     2701 tttcaataca gaaaataaag taatatacta tactaaagga atgttaaatg actaaagaga
     2761 attctccgtg taatttcgaa gaatgtggat ttaactatac tctagcatta attaatggaa
     2821 aatataaaat gagtatttta tactgcttat ttcgctatga aatcgtgcgt tataatgaac
     2881 tcaaacgctt tttaagctcc atatctttta aaactttaac caatacctta agagaactag
     2941 aaaacgatgg tttaattatc agaaaagaat acgctcaaat tccacccaag gtagaatata
     3001 gcttatccaa acgtggacaa agtttaattc ccattttaca agctatgagc aaatggggca
     3061 agaaagacaa aaaagggaaa aaatgcttga attaattggc gaactttctt tgcaaaatta
     3121 tatgggagaa tggcttgaaa tagctagaaa accggccttt tttcaaaaat cttgcctaaa
     3181 ttcaaaggca aaatacgagc ttaaatacaa aaatggcatt ccttatgtag aaattgagaa
     3241 tttttgcagt aaaaaaatga aatttcaagt ataaagggta aggcaaaaat cgtttcaaat
     3301 aggcaattag cagtgagatt taacatcttt atgaaccttt ttaacaaagt aaattatgaa
     3361 atcatttttg ttgatagcga gtataaagtt gccattgtgg gtagtcctga taaaaaatat
     3421 ctttggattt tagcaagaaa tataatagat gaaaaaaata taaaagagct tttaaacatc
     3481 gctaagcaaa ggggatttga cattagcgat gtggtttttg ataagtatta aattattctt
     3541 ttgtcatatc aatgacgtag cgaaatttag cctttcctga ggttagattt tcataagctt
     3601 tatcgatttc ttgtggggtg ataagctcgg tttctggata aatttcatgt tttaaagaaa
     3661 aatcaagcat ttcttgagtt tcggcaatac cgccaattag cgagccataa acctttttac
     3721 ctgctttatg cacaagctcg tttataccta tatttacctt atcttccaca ggcggtaagc
     3781 caactatagc catttcgcca ccaaatttaa gtaaatccaa ataaacagca ggattataag
     3841 gcgttggaat ggttgagatg attaaatcaa aacgttcttt tacagcgttt ttatcgcagc
     3901 ttgtgtaaaa tgagcttaca cccatagcca aagcatcggc ttttttgttt tcatttctag
     3961 caaaaacgct aacctttgca cccattttaa cagcatattt tacagccatc ataccaagtc
     4021 cgccaaagcc tgctatagca acgcttgaac cttcttttat cttagaaaat cttaaaggcg
     4081 agtaagtggt aatgcccgca caaagcaaag gcgcaacctt atccatcggt gcattttttg
     4141 gcacacaaat ggcaaatttt tcacttacaa ctatgttgtt tgagtaaccc ccataagtgt
     4201 tttcattgcc gtgaaataca tcgcaactat tgtaagtaaa gatggttttg ccattttcgc
     4261 aaaactgctc ttgtgagcgt ttgcaagcat cgcactcacc gcatgaattt accatacaac
     4321 caacccctgc gtaatctcct actttaaatt tgcttacatt tttacccaca gcgataactt
     4381 ctcctgctat ctcatgccca ggcacacaag gataagtagc ttctccccac tcgcttcttg
     4441 cggtgtgaat atcgctatga caaatacctg catataggat tttaatcaaa atatcattat
     4501 caccaatagc gtggcggcta aattcaaagg ctgtgaattt cgcatccttg ctaagcattg
     4561 catagccttt acttgcgatg cgattgtttt ctaaaatttt gtattgcatt tttgctcctt
     4621 ttttgatttt ttataattat aaaacattag agtagctata agtcaagagt gaaaataatt
     4681 ttttaaaaat tagtataaat gctataatta taaaatttaa tttcactttg gggtaaaaat
     4741 gcaaaatttg tattcagaag atgatactag agtaaaattt atagatgcaa agctttatga
     4801 tagttcttgg aatgaagaaa atataaaaag aaattattat tttacagatg gtagaaagct
     4861 tttaggtggt aaaagagcac aaagaaaatt tgcagattat ttgcttagat atgaaggaaa
     4921 caaccttgct ataatagaag ctaaaaaatt tagtaaagat cctttagatg gtttatctca
     4981 aggcatagaa tatgcaaaaa ttttaaatgt gccttttgta tatagtagca atggagaaaa
     5041 aatttatgaa tacgatatga gaagtcatag tggtgaatac atagataaat ttccaagtcc
     5101 taaagaactt tttgatagaa tttttggtaa tttaaaagaa tggcaatata gacttttaac
     5161 acaaaagcca atgtatatac cgcaaaaaga attaagatat tatcaaaaaa tagccataga
     5221 caaagtcata gaagctatta taaataacaa aaatagaatt ttactcactc ttgctacagg
     5281 cacaggaaaa acaaccatag cttttaattt gtgctatcgt ttgcttgaag ctagatggaa
     5341 taaagaaaac aaagatcaaa agcctaaaat actattttta tgtgatagag tgagcttaag
     5401 agatcaagcc ttaggagaat ttaatcctat agaaagtgat tgtaaggcaa ttagtgctga
     5461 agaaataaag aaaaatgatg gaaaaatcat aacaaatgca aatattttct ttggaattta
     5521 tcaaagctta gccgcaaatt caaaagaaca agaaaacatc caagaagaac aagagagcaa
     5581 attttatctt caatacccaa aagatttttt tgatcttatc atcatagatg agtgccacag
     5641 aggtggagca aacgaagagg gaagctggag agctgtgctt gagtattttt cttatgcgac
     5701 tcagcttggt ttaaccgcta ctccaaaaaa agaagaaaat atagacactt atgagtattt
     5761 tggtgagagt gtttatgatt atagtcttaa aagtggtatt gaagatggat ttttaacccc
     5821 ttataaagtc aaactcataa aaacaacttt gagtgatggt tatacttaca atcctgatga
     5881 tttgatacaa ggtgagcttg aaaaaggctt ttataaacaa agtgagtttg aaagaaatat
     5941 ctttttacca aactataatg actttatcgc taagaaaatt ttagagctta taaatcctat
     6001 ggataaaacc ataatttttt gtgtaaatca agctcatgca aatgaagtaa aaagagctat
     6061 agataaatat aaaagtgtta aaagagatga ttattgtgta agagttacga gtgatgaagg
     6121 taaaataggg cttgattatc taaaattgtt tcaagataat gataaaagct atcctgtcat
     6181 acttactagc tctaaaatgc tcacaactgg agtggatgca aaaaatgtgc gaaatatagt
     6241 attgctagca aatataggtt ctatggtgga atttaagcaa attatcgggc gtggcactag
     6301 ggtttatgaa ggcaaagact tttttaccat acttgatttt gtcggtgcga ctaagctttt
     6361 ttatgatcca aaatgggatg gtgaaaaaat agaagaatta aaagagcaag atgaaaaaga
     6421 aaaaatcact aaagagcata taaaacaaac aaaagaagaa agcaaagaaa aaaagagcgt
     6481 aaccatacac ttaaaaggca caaaacttaa ggttttagat atcacaacta cttatgtagg
     6541 agcacaaggt aagccactta gcactaagga gtttttggaa tttttgatag gaaagcttgg
     6601 tgagtattat gatgatgaag caaaattgcg tgaaatttgg agtgatcaaa aaaatagaga
     6661 aagattttta aaagcccttg caaatgatgg agtagatgaa gatgctttaa aagatctaag
     6721 agaaattttt caaaaagatt gtgatatata cgatgtttta gcgcatttaa gctttaatgc
     6781 cgagataaaa acaaggcaag agcgtgtttt acaagtagaa aatggtgagt ttttaaaacg
     6841 ctttcaaaaa gaaaaggcta taaaatttat agaattttta ctcggtagat atcagcaata
     6901 cggcataaaa gattttgatg atggcttaaa accacttata gaacttagtt ctttaggcaa
     6961 tgtaagagaa ttggccgatg aatttggtgg cttagaaatt ctaaaacaaa gctttgatga
     7021 tttacaaagg gagatttatt taaattaaag gagagaaaat ggatatattg atttcaatta
     7081 ttagtgggtt agtcggagga tttgttggta gttgttttgc tttatattta agatttaata
     7141 aaaaaactag aaaaaatata aataaagtta gtttaaaact atctagtttt cttaactttg
     7201 gtagtataaa acaagaaaat tcaaataagt gattaaaaga atgtttggtt ttaaattatt
     7261 tagtt
//
LOCUS       DARATF010000077         7059 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.077, whole genome shotgun sequence.
ACCESSION   DARATF010000077 DARATF010000000
VERSION     DARATF010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7059
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.077"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(38..976)
                     /locus_tag="SB502_001388"
     CDS             complement(38..976)
                     /locus_tag="SB502_001388"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEG0434821.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEATAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(978..2192)
                     /locus_tag="SB502_001389"
     CDS             complement(978..2192)
                     /locus_tag="SB502_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEG0434822.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAIQDAGFSEELDKEEFGIVS
                     ASGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVVGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVVSVMALRDGVVPPTINQLVKDDECDLDYIPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(2219..2452)
                     /gene="acpP"
                     /locus_tag="SB502_001390"
     CDS             complement(2219..2452)
                     /gene="acpP"
                     /locus_tag="SB502_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0434823.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            2562..3230
                     /gene="tenA"
                     /locus_tag="SB502_001391"
     CDS             2562..3230
                     /gene="tenA"
                     /locus_tag="SB502_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEG0434824.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELDIK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFWEHSLRM
                     ELNL"
     gene            complement(3254..4111)
                     /locus_tag="SB502_001392"
     CDS             complement(3254..4111)
                     /locus_tag="SB502_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HEG0434825.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERIN
                     IFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(4115..5080)
                     /locus_tag="SB502_001393"
     CDS             complement(4115..5080)
                     /locus_tag="SB502_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEG0434826.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMRAGKMNPMHVFGEDEIEGHKDLVKMIKAAQEAAVKE"
     gene            complement(5077..6912)
                     /locus_tag="SB502_001394"
     CDS             complement(5077..6912)
                     /locus_tag="SB502_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEG0434827.1"
                     /translation="MGEFSRRDFIKTACISVGALVASSSGVYALDDSSKMDKDANLPS
                     CDVLIIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMDHELLDIGVVDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRGY
                     GEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGIE
                     VAKFEDMSTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDAS
                     FGKGVKTHELAQKWQVRFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLL
                     AKKLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHT
                     REDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
BASE COUNT         2285 a         1483 c          934 g         2357 t
ORIGIN      
        1 taaataataa aattatttaa aaaagcgaag taaaagccta agcctcttga taggctccaa
       61 gctttaaaat tttctgcata cgatttgcag aaagttctcg tacatcaata ttttcaagtt
      121 catttagaga tttttttaca taatcagcaa tagctactgc tgtagcctct ttattgcgat
      181 gtgcaccatt tgtaggctca tctataacat catcaattaa accttgagat tttaaatcat
      241 cagccgttac cttcatagcc ttggttgcag cttcactttt tgcaggatca ttccaaagta
      301 ttgcagcaca accttcagga gaaattactg aaaaaacaga atttttcatc attgcaagtt
      361 tatctgcaac ccctatagct aacgccccgc cactaccgcc ttctccgata actatagcaa
      421 tggtcggtat tttcaaatca cttaattcat ataaatttct agcgatagct tcactttgtc
      481 ctctttcttc agcacctatt ccaggataag cacctggagt atctatcaaa aataaaatag
      541 gaatttgaaa tttctctgca agtcttgcta ctcttaaggc tttgcgatat ccttcaggat
      601 gtggcatccc aaaatttcta gcgattttat cttttgttcc acgtcctttt tgctcaccaa
      661 ttacaattat ttttttctct cctaaataac ccataaaaca aacaatagca ggatcatctc
      721 taaaggcacg atcaccatgt atttcgtgag cgtcatttaa aataagttca atatagtcaa
      781 gagcataagg gcgatctgga tgacgcgcta attgcaaacg ctgaaaatca cttaaattct
      841 tataagtttt agaaatttct ttttcaagat ttttctttaa aattgataca gcttcagtat
      901 ctcctttaat ctgagcattg ataatgtcct cgtcaatttg ctgaatattt ttttcaaaat
      961 ctaaataaga agccatatta atctactttt ttaaatacaa cacagccatt tgtgccacca
     1021 aaaccaaaag aattactcat caccactttt aaatctactt ttcttgatat atttggaata
     1081 taatcaagat cacattcatc atcttttaca agctgattga ttgtaggtgg aactacccca
     1141 tctcttaaag ccataacact aacaactgct tcaattgcac ctgcagcacc caagcaatga
     1201 cctgtttgtc ctttggtgga acttataagc gggatattat tgccaaaaag ctctttaatt
     1261 gctgctgttt catttttgtc atttacaggg gttgaagttc catgtgcatt gatataatct
     1321 acctttggat tccctgccat atttaaagct tttttcatag ctcttaaagg cccatctaaa
     1381 gttggtgaag taatatgatg cgcatctgca ctttctccaa atccaattaa ttcagcataa
     1441 atcgtagcac cgcgtttttt agcctcttca tattcctcaa aaactaaagc tccagcacct
     1501 tctcccatga caaaaccatc tctttctttg tcaaatggtc ttgaagcatg ctgtggatct
     1561 tcatttctag ttgataaagc tttcattgaa gcaaaaccac ctatacccac aggacaaatc
     1621 gcagcttctg cacctacgac taacatcttt ttagcatttc ccaaagctat acttttataa
     1681 gcttctccta tagcatgagt tcctgctgca caagctgtaa cacaagaaat atttggccct
     1741 ttaagtccat gctctataga aatcaaacct cctaacatat ttacaagtgc cgaaggtatg
     1801 aaaaaagggg aaattttacg cggacctcgc tcggaacaaa taatggaatt tttttctatg
     1861 ttaggcaaac ctccaatacc agaagccgaa acaatgccaa attcttcttt atctaattct
     1921 tcactaaatc cagcatcctg tattgcttct cttgctgctt taattccaag ttgtatgaaa
     1981 cggtcaattt tttttacttc tttgccatca acaacctcta atggatcaaa atttttaact
     2041 tcagctgcaa tttgaacagg aaagtccgta gcatcaaaaa gagtaatttt atttactccg
     2101 ctttctccat tgcaaattgc tttaaatgaa ctttctttat ctaaaccaag ggcattgatc
     2161 ataccaatac ctgtaactac aactcttttc aagaataagc tccttgcaag aaaaaaaatt
     2221 atttttttag attgtcaata taatttacaa catcttcaat tttaattaat ttttcagcat
     2281 cactatctgg aatttctact tcaaattttt cttctaaagc cataataagc tctacaacat
     2341 ctaaagaatc agcacctaaa tcttcaataa tttttgattc cattttaact gcatctgcat
     2401 caatacttaa ttgctctact actactgctt ttacatcatc aaatgttgcc atttgttctc
     2461 cttcaaaaaa ttaaaataaa gcgtatttta ctataaaaag cttaaaatat ttatagtttt
     2521 tcattatact tgaaaataaa atattaaaac ataaaggaaa aatgatgctt ttctctaatt
     2581 taatcaaaga aaatcaaaaa atttggaatg cttatctaca tcatgatttt gttaaaaaat
     2641 tggaagataa aagcctaaag caagaaaatt ttctttttta tctcaagcaa gattatattt
     2701 atttgcttaa ttacgcaaaa tgttatgcaa gattagcact taactcaaat actgcaaaag
     2761 aacttcgttt tgctatgaaa tttcaaaatt atatagttga aggagaaatg gaacttcatc
     2821 gtgcaatttt atctcttggc attaatgcag atgaactcga tataaaagat gaaagtttag
     2881 tcaatatagc ctattcgcgt tatatgttaa gcgtaggtga aaatggagat tttttagata
     2941 tgttagttgc tcttagtgct tgcgctatag gctatgcaaa aataggtgct gaaattataa
     3001 atcgtttaaa aaatgaaaat ttaaaagatc atccttacaa ggaatggatt ttgacctatg
     3061 gaagtgaaaa ttttcaaaat gaagctaaag aatttgaaga ttttgttaat tcttatactt
     3121 caagtgttgg tgcacaaaaa ttccaaaaac tcagcgaaat ttttcatact gtaacacgct
     3181 tagaagtggc tttttgggag cattctttaa gaatggaatt aaatctttaa acatgggctt
     3241 tttgcccatg tttttatgca attttacttg catcaataat attataatct aaaccaacca
     3301 tttctttaga aagtcctaat gcaagtccta ctaattgtga taaatgaata ataggcaatc
     3361 ttgctttaga attagtataa tcttgaaatc tttcttgata gatatcaagc tgcatttgac
     3421 aaagtggaca aggtgttaca acacaatcag cttgattttc acttgcatta ttgacaattt
     3481 gactagacat ttttttcaca gatttttctg caggataaga agcatgaaaa ccacaacaat
     3541 caaggcgttt ttcaaaagga actattttag cccctaaaac ttctactaca ctttcaaaac
     3601 tttttggatt ggttgaactt tcttttttac cgaaagcatc ttcaggtctt aaactatggc
     3661 aaccataaaa taaagctact tttaaatttg aaagcggctt tttcaccttg ctttttaaat
     3721 tatccaaatc ctcataaagc tcccacaaaa gacttgtaat aggcgttgaa ccttgatatt
     3781 tcattccacc ttgtgctaaa aaaatattga tgcgttcttt tgcaccctta tcaagagtat
     3841 tttttgcttt agttaaagtt agcatacaag tactacaagt tgtaagcatt ggcattttca
     3901 tctcttctgc taaagcaata tttcttgcat tagctaccaa agtcgcaata ggatcaacac
     3961 actgcgcttg agaagcccca caacaactcc accccttgat ttcattcaac ttccaaccca
     4021 aaataggtgc aatagcttca agtgaaattt tagattcttt tgcagcttga gataaaacac
     4081 aacctggaaa aaaagcgtat tctttttgca tattttactc cttaacagca gcttcttgtg
     4141 ccgcctttat cattttaacc aaatctttat gaccttctat ttcatcctcg ccaaaaacat
     4201 gcataggatt catttttcct gcacgcataa gtttaaaagc tatatctgtt ttacccatag
     4261 aacctataac accctcagaa cgcaaagcaa gataaatttc attcaagcgt cctgaacctt
     4321 caactaaatc tttataaaaa gcttcagcat gatcaggccc taagccttca tttaaacctt
     4381 ttttaatcgc catcactctt aaatttgcta tatcacttac tgaacttata ccctttggac
     4441 aacgatcagc gcactcttga caatgaacac aaagccaaag tccattcatt acgctgggtt
     4501 ttacatgcaa cataggatcc ttacctcgag agtctgccgc tgcacgccaa gcatgagtaa
     4561 aaacaaaagg ttgcatataa tcgctactat ctgcttctaa tttattacac tctgaggcac
     4621 agctaccaca taaaatacaa tcccattgct tgctaatacg atcaaattct tcttgacttt
     4681 gtttacagcc cttttccgct gaaaattcat tttttgccac catggcagga cgaatttttc
     4741 ttaaattttc tatagaaggc tcccaatcca caattaaatc agaaattact ctaaaatttc
     4801 caagcggaga aatgcgtata cttgaaggat tatcatattc ttttaataaa tcttgcattt
     4861 tagtatcaca agcaagataa gaatgcccat tcacacgaac tgcacaagcc ccacaaattg
     4921 cagattgaca agaggcggta aaatttaaag taatatcttt tgtttttttg ataaaaagca
     4981 aaagagagag cagagttttt ccttgtatat ccttatcatc aatatcataa ctttgttcat
     5041 atttttcctt gccattaaaa cgatctatga taattttcat tgtactctcc ttccatcaag
     5101 tgaaaactca gttaccacga catctttata actaagtttt aattcatcat tttctaaatt
     5161 tacaatgcta tgttttaaga aatttttatc atctcgcttt ggataatctt ctctagtatg
     5221 agccccacgg ctttcaagtc tatttctagc tgctaaacaa gcacagcgag aaagtaaaat
     5281 caaattacca agctctacat aatctgtaaa agcagtattc atcacttcat taggatttgg
     5341 aatacgaatt ttttcatatc tcgcttgtat atcttctaat ttttttgcta gaagatcgag
     5401 tttttcttga gttctaaaaa tccccatatt atcccaattt tgacttccta gctcttctcg
     5461 caattcatac atttcttgac catttccgcc attatttgta atttctttaa atctaacctg
     5521 ccatttttga gcaagttcat gagtttttac cccttttcca aaacttgcat ctttagcata
     5581 atttgtcgca ccaatgcctg ctaaatgccc tgttacaact gcatcggcta aagaatttcc
     5641 ccctagtcta ttagctccat gtatagaaat gcaagaagct tctccaccta cataaattcc
     5701 agcaatttta gtactcatat cttcaaattt agccacttca attccaccca tagaataatg
     5761 cgccgttgga cggataggta caggagtatc tactaaatca atattttcaa aaagcattgc
     5821 agtgtgacga atttttggta aatcttttaa aattttttct tttcctaagt ggcgtacatc
     5881 gcacaaaaca taagctccaa gtccctcgcc ataacctcta ccttcacgaa tttctgtttc
     5941 tatagcacgc gcaaccacat ctcgcggtgc aagctccatt ttttcatggt aatttttcat
     6001 aaaacgctca ccacgattat ttaaaagata tcccccttca ccgcgcgccg cttctgtaat
     6061 aagagttcca ccatttgcaa ctcctgttgg gtgaaattgt atcatctcag gatcttcaaa
     6121 accaagtcct gctctaagag cagctgccac accatctcct gtggcaataa aaggagttga
     6181 agttctatta taaaatatcc ttgtgtatcc ccctgtagca atcaccaaag ctttgcataa
     6241 cacaggataa attccaccgc tttgtatatc tcttaaaacg acaccctcgc attttccatc
     6301 cacaacacct atatccaaaa gttcatgatc cattaaaaat ttcacaccac tactaatagc
     6361 atcatctaaa caagaatgca ttaaaatatg acctgtttta tctgcagaat agttacagcg
     6421 tttcttagaa gctcctccca ttaaacgctg agctactcca ccttgctcat ttcttgaaaa
     6481 caaggttcct ataaaatcca tattaaaaat agcctttcca gctaattcgc aaaattttaa
     6541 agccgcgtct tgatctacca aataagctcc gcctttaata gtatcataag catgtaattt
     6601 ataggaatct ccattagaaa aatcagtaac tccattaatt ccaccctctg ccatacaagt
     6661 tgcgttacgc gatggcatca tctttgtagc tactacaacg cttaattttg gattttcttt
     6721 tctcactgcg gctgcagcac gcaaacctgc tccacctgat ccaattatca aaacatcgca
     6781 agaaggtaaa tttgcatctt tatccatctt agatgaatca tctaaagcat aaactccact
     6841 tgaacttgca actaaagctc ctacactaat acaggctgtt tttataaaat ctcttctaga
     6901 aaattcaccc atatcattct ccttatttaa aaaaattaat aataattttt aatgtaagtc
     6961 aatcttacat aaccgcatgc caaaaatcca aaaacaaact ctcctttcaa tataaaatgg
     7021 attaaaaaca aatttataat ttagtaaata taaaaaagc
//
LOCUS       DARATF010000078         6927 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.078, whole genome shotgun sequence.
ACCESSION   DARATF010000078 DARATF010000000
VERSION     DARATF010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6927
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.078"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            24..1337
                     /locus_tag="SB502_001395"
     CDS             24..1337
                     /locus_tag="SB502_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434828.1"
                     /translation="MITQIIILYFHKQKLIKNSKISFANTFLKQNASKLNEIQSANSQ
                     TLVRSEVLNSTNISNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKYKQADISNTST
                     NTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIKKAAENEPYIADMKQYFGVS
                     EYYTNIDMAETIKQYYNQFNQIVNHTFNDTNKTSFTETDINSMPKGYAINGIKSMDFN
                     DPSNRMNITHLRDFSNSSITNIYQTPEQMKEAESLYIQSGSLIDGINGHSFGLSLEEI
                     KNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKSYSPIPSSNQVVLSPEAKVRE
                     AKLELEMKANPSFSVSLDDIMTGKVDFASLLKGYAQDGWLDAGIYVMEKGVKWQNVYV
                     GSGISFDREFHQAKANGWKASSESINSFADSIMDRLNNLMGQTRV"
     gene            1431..2201
                     /locus_tag="SB502_001396"
     CDS             1431..2201
                     /locus_tag="SB502_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEG0434829.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNTTINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDATRAILAPFQENPEFWGIAVQKGNAELKKE
                     LDEFIAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF"
     gene            complement(2217..2951)
                     /gene="fliP"
                     /locus_tag="SB502_001397"
     CDS             complement(2217..2951)
                     /gene="fliP"
                     /locus_tag="SB502_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEG0434830.1"
                     /translation="MKKILLFLLLSMSLFAAEVTIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            3094..4383
                     /gene="glmU"
                     /locus_tag="SB502_001398"
     CDS             3094..4383
                     /gene="glmU"
                     /locus_tag="SB502_001398"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEG0434831.1"
                     /translation="MKTSILILAAGLGTRIKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALSGFEPKNERVLILCGD
                     MPLVEQTSLEALLGNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQKKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGTLFINRAGHKMIKDYYYKKFQK"
     gene            4380..5534
                     /gene="coaBC"
                     /locus_tag="SB502_001399"
     CDS             4380..5534
                     /gene="coaBC"
                     /locus_tag="SB502_001399"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEG0434832.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALVDEVLCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKSLIIAPAANTNMFHHFSTQNSLKMLKENKALIIEPICKVLACKDEGVGAL
                     AEVKNIFNIVKRELLKEKFWCDKSVVITGGGTKEKIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELCKFESSKDLKELLDKNLNHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            5531..6148
                     /locus_tag="SB502_001400"
     CDS             5531..6148
                     /locus_tag="SB502_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434833.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGVSIFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            6152..6820
                     /gene="uppS"
                     /locus_tag="SB502_001401"
     CDS             6152..6820
                     /gene="uppS"
                     /locus_tag="SB502_001401"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEG0434834.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            6817..>6927
                     /locus_tag="SB502_001402"
     CDS             6817..>6927
                     /locus_tag="SB502_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEG0434835.1"
                     /translation="MIFFIIILGACLGSFCTSLASRIIEKKPFFISRSFCF"
BASE COUNT         2562 a          838 c         1265 g         2262 t
ORIGIN      
        1 taatatgagt atctttagca tcaatgataa ctcaaattat aattctatac tttcacaagc
       61 aaaagctaat aaagaattct aaaataagtt ttgctaatac ttttttaaaa caaaatgcta
      121 gtaaattaaa tgaaattcaa agtgcaaatt cacaaaccct ggtaagaagt gaagtattaa
      181 attctactaa tatatcaaat actagcaata atactaattt tagtataagt agtaaaacaa
      241 gttctcccaa ctatgatata tcaagtgaat ttaaaaactc tatttatact ctaaaatata
      301 aacaagcaga tataagtaat acttctacta atacagctta tggttatagt gtagataaag
      361 atggctatat gggaagtgat tttaacaaag ccgcaggatt gcctgaagat tttaagatac
      421 ataaatctac tttggatgag attaaaaaag ctgctgaaaa tgaaccttat attgcagata
      481 tgaaacaata ttttggtgta agcgagtatt atactaatat cgatatggct gaaaccataa
      541 aacaatatta taatcaattt aatcaaattg ttaatcatac ttttaatgat accaataaaa
      601 caagtttcac tgaaacagat ataaattcta tgcctaaggg gtatgctata aatggaataa
      661 aatcgatgga ttttaatgat ccaagcaata gaatgaatat cactcaccta agagattttt
      721 caaattcttc tattacaaat atttatcaaa cccctgaaca aatgaaagaa gctgaaagtt
      781 tatatataca atcaggatct ttaatagatg gcataaatgg acatagtttt ggtttatctt
      841 tggaagaaat caaaaatgtt tctaaaggtg aagattggca atttaatcct gatatgtcag
      901 tttatccaca aaatgaagat ggaagttatt ctaaagaagc tttatttatg agttttttaa
      961 agtcttattc gcctattcca tcttcaaatc aagttgtttt gagccctgaa gcaaaagttc
     1021 gtgaagcaaa acttgagcta gaaatgaaag caaatccttc ttttagcgtt tccttagacg
     1081 acatcatgac aggaaaagtt gattttgcaa gtttattaaa aggttatgca caagatggct
     1141 ggcttgatgc aggtatttat gtaatggaaa aaggagttaa atggcaaaat gtatacgtag
     1201 gcagtggaat ctcttttgat agagaatttc atcaagcaaa agctaatggt tggaaagcaa
     1261 gcagtgaaag tataaattct tttgctgatt ctataatgga tagattaaat aatcttatgg
     1321 ggcaaactag ggtttagaag ttttaatttt ttaagtttga aacaaattgc taataacaaa
     1381 ataagataaa attagtataa tttttttaca aaaaattttg aaaggaaatt atgaaaaaaa
     1441 ttattttgat ttttatctct ttttttgctt taaatttgag tgcaaaagat ttggttgtag
     1501 gaatggagct tggatatccg ccttttgaaa tgagcgataa aacaggcaaa gcaagtggaa
     1561 ttagcgtgga ttttttagaa gcttttgcaa agaaaaacgg ctataaactt gtagtaaaaa
     1621 atatcgcttg ggatggttta atacctgctt taaaaacagc caagatagat cttattatgt
     1681 cctctatgac aattaccgat gagagaaaga aagtggtgga ttttagcatt ccttatgcta
     1741 aggcaaattt ggctatttta actcctttga actctgatat tacaaatatc aaagatttag
     1801 ataaaaaggg caaagttttg gctttaaagc gtggctctac aggacattta tatgcggtta
     1861 aaaatttaaa aaatacaact attaatttat ttgataaaga aaatgctgct attttggaag
     1921 tgattcaagg taaggctgat ggattttttt atgatcaact tacgatttat cgcacttggc
     1981 aaaaacatca agatgcaact agagccattt tggcgccttt tcaagaaaat cctgagtttt
     2041 ggggtatagc agtacaaaaa ggcaatgcag aacttaaaaa agagcttgat gaatttattg
     2101 cagaaagcaa aaaagatggg ctttttgatt ctttaggaga gaaatatctt aaagatgtta
     2161 aagatacttt taaaaagaat aatttagaat tctttttcta agaaggattt tccttcttag
     2221 gttacaaagc tttccacaag cctttgcact agcaaattcc atccatccac taatacaaaa
     2281 attaagagtt taaaaggtag agagatcata gtaggaggta gcatcatcat acccatagcc
     2341 attaaaactg agcttacaac catatctatg actaaaaagg gtaggtagat taaaaaccct
     2401 atttcaaaag cggttttaag ctctgaaatc ataaaagcag gaactaaaac cgtaagggga
     2461 acatcatcta tggttttggg attgggtaga ttgcgtatgc gataaaaaag ggctaaatct
     2521 ttttcgcgag tatttttaag cataaaatct ttaaaaggct ttgctccttt tataaaagcc
     2581 tcttcatagc ctattttttc tgctaaataa ggttttatac cttcattata ggattttgta
     2641 gctacaggtt ccatgataaa aaaagttaaa attaaagcca aggttaccaa aatagtgtta
     2701 ggtggcatac tttgcgtccc catagcttgt cgtaaaaatg aaaatactac aataagacgc
     2761 aagaaagaag tcataacaaa aactatactt ggagcgagcg caagtatggt taaaacaatc
     2821 actatattta aagtagtaac aagctgatta ggtgtattgg gtgcacttaa gcttaaattt
     2881 actgtaggga tagttacttc agcagcaaat aagctcatgc ttaaaagtaa aaataataat
     2941 atttttttca aaatttaaaa accttttttt gttttttatt aaagaaattt aaattttatc
     3001 ttttgatgac taaaaactag tttaagggta ttaggatttt aactttaaac tgctaaaata
     3061 gtcttttaga cttcttaata acaaaggtaa aaaatgaaaa cttctatttt gattttagcg
     3121 gcaggattag gcactagaat aaaatcacaa aagccaaagg ttttgcaaga gctttgtcaa
     3181 aaaagtatga ttttacacat tttaaaaaag gcttttgctt taagtgatga tgtaagtgta
     3241 gttttatcgc atcaaaaaga acgcgttgaa aaagaaattt tagaatattt tccaaaaaca
     3301 caaattttag agcaagattt gcaaaattat ccaggaactg cgggagcttt aagtgggttt
     3361 gagcctaaaa atgaaagagt gttgattctt tgtggtgata tgcctttggt tgagcaaaca
     3421 agtttggaag ctttgttggg taataatgca aaattaaatc tagcagtttt taaagcaaga
     3481 gatcctaaaa gttatggtag ggtggtgata aaaaacgata gcgttgaaaa aattgttgaa
     3541 tttaaagatg caaatacgca agaaaaagag ataaatactt gcaatgctgg ggtttatgtg
     3601 attgactcga ggcttttaaa agagctttta cctttgattg ataacaataa tgcggcaaaa
     3661 gagtattatt taaccgacat tgtaaaacta gcaaaagaaa aagatgtgat gattaaagca
     3721 gtttttgtag atgaagatga atttatgggg attaatgata aatttgaact cagtatagct
     3781 gaaaatttca tgcaaaaaaa aattaaaaaa tactggatgc aacagggtgt gatttttcat
     3841 ttaccgcaaa gcacttttat aggtgcagat gttgaatttg taggtgaatg tgaagtatat
     3901 gaaaatgtaa ggatagaggg caaaagtaag attataaact ctatcattaa aagttcaagc
     3961 gtgatagaaa attccatcgt agaaaatagc gatgtagggc ctttggcaca tttgcgtcca
     4021 aattgtgagt taaaaaacac tcatatagga aattttgtag aatgcaaaaa tgcaaagtta
     4081 aataccgtaa aagcagggca tttgagctat ttaggagatt gtgagataga tagtggaacc
     4141 aatataggct gtgggactat cacttgtaat tatgatgggg taaaaaagca taaaaccatc
     4201 ataggaaaaa atgtttttgt aggttctgat acgcaattta tcgcacctgt aaaaatcgaa
     4261 gatgaagtga tcatagcagc aggaagcaca gtaagtgtca atgtagaaaa gggtactttg
     4321 tttatcaata gagcagggca taaaatgata aaagattatt attataagaa atttcaaaaa
     4381 tgaaaaccat acttttagcc attagcggta gtatagcttt ttataaatct tatgagctta
     4441 tttccttgtt taaaaaagaa ggctttaggg taaaagtttt gctttctaat ggtttgttaa
     4501 aatttgctag caaaatgagt tttgaagcct tggttgatga agttttatgt gaggaaaatg
     4561 aaagttggca aaattcaaac aatcacatag cttttagcaa ggatgtagac cttgttttgt
     4621 ttgcccctgc aagtgttaat tctatcaata aacttgcttt tggtatagcg gataatcttt
     4681 ttatccaaac cttaatcgca gcaaataaat ctcttatcat agctcctgcg gcaaatacaa
     4741 atatgtttca tcattttagc acgcaaaatt ctttaaagat gcttaaagaa aataaagctt
     4801 tgattataga gcctatttgt aaagttttag cttgtaaaga tgaaggcgta ggagccttag
     4861 ctgaagttaa gaatattttt aatatcgtca aaagagaact tttaaaagaa aagttttggt
     4921 gcgataaaag tgtagttatc acaggtggcg gcacaaaaga aaagatcgat gatgtgcgtt
     4981 gtgtgagtaa tttttcaagt ggaaaaatgg caaaggccat agctgacgct ttttattttt
     5041 taggagctag ggtaaaactt ttaagctctg tggaatttga tacgccttat gagctttgca
     5101 aatttgaaag ttctaaggat ctaaaggagc ttttggataa aaatttaaat catgactttt
     5161 tgattatgac ggctgcggtg agtgatttta tccctcaaag tgtaaaaggg aaaattaaaa
     5221 aaaatgagca tttacagggt ttaaatttgc atctatcttt aaatgaagat ttgcttaaaa
     5281 cttgcaaatt tcaaggcaaa aagataggtt ttaagatgga atttgattct caaaatgcct
     5341 tagaaaatgc gaaaaaatct ttaaaagata agcaacttga tatggtttgt cttaatatca
     5401 ttgatcaaaa aaattatttt ggaagcgatc aaaatgagct ttattttatc actttaaaca
     5461 atgaaaataa aagcactttg caaagcaaag aaaaattggc atttgaatta gtaaaatggt
     5521 gtgaaaaatt atgagtatga ttaattctac cttacctata caaatgaaag ttttagctaa
     5581 atcaggttat ggacattata cgcttttatt aaatcataaa aagattcaaa ccaaaagcat
     5641 gatagagctt gaaattggtg ctgaatattt agctgaactt tatatgcaaa atggtggagt
     5701 tatacaattt aaacatcttt caaagcgtcc taattttaaa ccttttgaag agggattggc
     5761 tttgataatc gctattttag aggataaaat ttcttataaa aaattcatca tacaaaatct
     5821 tttagattgt aaagatatag agcgttatca gatattaaaa gaaatgcttt ttgcaagttt
     5881 tgaaaatatt tatcatattc cttttatctt tgaaaataaa tcttgcttgt ttcaaatgcg
     5941 taaaagagca aaatatttag aaatttactt atattttagt gtttttggag ctttgaaaat
     6001 tttaatagat tcacaaggtg ttagtatttt tacacctttt gctaaggtac aaaaattttt
     6061 aaacgaacat ttagatttta atgtatcgca agaaaacaag attgaacctt tgtttgtttt
     6121 caaaaggctt tttgatttta aaggatgaaa aatgaatgaa ttaaaacacc ttgctgttgt
     6181 tatggatggc aataggcgct gggctagggc taagggtttt ttggcaaaac ttggatattc
     6241 ccaaggagtt aaaactatgc aaaaattgat ggaagtttgc atggaagaaa atatttcaaa
     6301 tttaagcctt tttgctttta gtacggaaaa ttggaagcgt cctaaagatg aaattgattt
     6361 tatttttgaa cttttagatc gttgtttaga tgaagcttta gaaaaatttg aaaaaaataa
     6421 tgtgcgttta agagctatag gtgatttatc gcgcttggaa gataaagtaa gagaaaaaat
     6481 taccttagtt gaagaaaaaa caaagcattg tgacgcactt tgtgttaatt tggctataag
     6541 ttatggtgca agagatgaga ttataagagc tgctaagcgt gtgattgaaa aaaaacttga
     6601 gctaaatgaa gaaaatttaa cgcaaaattt agatttacct ttagatgtgg atttgatgct
     6661 tcgcgttgga aacgctaaaa gactttcaaa tttcttactt tggcagtgtt catatgctga
     6721 aatttatttt agtgaaactt tatttccatc tcttaccaag agagaattta aaaggattat
     6781 taaagaattt agaaatagag aaagaacttt tggaaaatga tatttttcat aataattcta
     6841 ggggcttgtt tgggttcttt ttgcacaagt ttggcaagta ggataattga aaaaaagccc
     6901 ttttttatct cgcgctcttt ttgtttt
//
LOCUS       DARATF010000079         6807 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.079, whole genome shotgun sequence.
ACCESSION   DARATF010000079 DARATF010000000
VERSION     DARATF010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6807
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.079"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(174..770)
                     /locus_tag="SB502_001403"
     CDS             complement(174..770)
                     /locus_tag="SB502_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEG0434836.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVACKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKDSILVSNLNKFGLDSLEDIIINQTLGLDK"
     gene            complement(767..1228)
                     /locus_tag="SB502_001404"
     CDS             complement(767..1228)
                     /locus_tag="SB502_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEG0434837.1"
                     /translation="MVARQIILLLACVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNASFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            complement(1210..1725)
                     /locus_tag="SB502_001405"
     CDS             complement(1210..1725)
                     /locus_tag="SB502_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434838.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNASTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGSNNVKIISQEVEYQPKDKILHTNTNFKALINGSIINGNTLNYDIKNKILN
                     IQGVSAWLQDK"
     gene            complement(1716..2204)
                     /locus_tag="SB502_001406"
     CDS             complement(1716..2204)
                     /locus_tag="SB502_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEG0434839.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIEILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKQGGKAAVAQMIEILVEKNHLKEEWNKL
                     WL"
     gene            complement(2210..3037)
                     /locus_tag="SB502_001407"
     CDS             complement(2210..3037)
                     /locus_tag="SB502_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEG0434840.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGAKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(2997..4115)
                     /locus_tag="SB502_001408"
     CDS             complement(2997..4115)
                     /locus_tag="SB502_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEG0434841.1"
                     /translation="MKKNLLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILAQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYTLSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(4115..4930)
                     /locus_tag="SB502_001409"
     CDS             complement(4115..4930)
                     /locus_tag="SB502_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEG0434842.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDNYDEKILRQYLCDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEDGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQLVANKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            complement(4921..6165)
                     /gene="cbrR"
                     /locus_tag="SB502_001410"
     CDS             complement(4921..6165)
                     /gene="cbrR"
                     /locus_tag="SB502_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HEG0434843.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVIVAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDRCLSYMDDKKFLSTYNVLDLVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLV
                     DKASKILSQAKDNGKDRVEVCS"
     gene            complement(6271..>6807)
                     /locus_tag="SB502_001411"
     CDS             complement(6271..>6807)
                     /locus_tag="SB502_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HEG0434844.1"
                     /translation="LSQTRKKNLKKLEKCLNNYLKDLYMKDASLTLKENEKISILGKD
                     EIMLDINLANLKNLSSGELNRLRLAFIATECNILNAGKGILFLDEIDANLSGKEAMSI
                     AKVLEELSKFYQIFAISHLPQLSSKAHNHFLVEKNGEESKVKKLDQEERIKELARMVS
                     GELVSDEAIEFAKTLFKN"
BASE COUNT         2312 a         1227 c          770 g         2498 t
ORIGIN      
        1 tgaaaaagtt ctctctctct cttctaataa gcaaaacata taacagaaaa aaatcccata
       61 aagtaacggg gtatatacaa aagtcgaacc aagaatctga taaattagaa aaaaaaatcc
      121 taaaaagaca taagctccat taaattttgc tttataagca cttaaatttc ttctcattta
      181 tcaagaccta aagtttgatt gataataata tcttctaaag aatcaaggcc aaatttattc
      241 aaatttgaaa ctaaaataga gtctttaaat tcatttttta acttagcttt ttcactttga
      301 tttaatttat cgcatttggt aaaaactttt aaaatttttt gatcaggtcg taaaaatctt
      361 ttcaaatagt catttaaatt tacatcgatc tctaaatgag tatgtcttga gtcgattaaa
      421 tgtataaata actttatcga ggttcttaat tttaaaaatt catctaagtt ttgattccat
      481 atttctttta aatttttaga aacctttgca taaccaaacc ctggtaaatc gataaaattg
      541 atattaaatt tttcttcatt tcttttgcaa gctacttcga aaaaatttat aagctgagtt
      601 tttccaggag ttgccgaact tttggctaaa tttttttgtt tacacaaaga attgattaaa
      661 gaactttttc cgacattgga acgccccaaa aatgctactt cactaaaatt tgagctcaaa
      721 ttctcatcaa atttcactaa agaagtgata aatttagcac taattatcat ttgtctttaa
      781 ggtcaaatac aaaacgagca ggtttttgat ccttgctctc tactcgataa atattagctt
      841 ttctatcgac tattatttta tcaccaaaaa gtttttgatt gcttccaagc tcatttatat
      901 aagcatgacc attaatctcg taagtatctt taataacatt ataaataaat ttatctccac
      961 tacctttata agttttacct tttaaaacaa tcttaaagct agcattttgc attgcttcat
     1021 aacgaatagg tttgcgattt ttatccgtat aaataatcaa tttttcagaa tttaaaatat
     1081 catcacccct aattacttct acatttccac taagaatact ttcaccctta ttttcatctg
     1141 agtaaaaatt taaagctttt acttcaattt gagttgccca agttacactt acacaagcca
     1201 acaataaaat tatttgtctt gcaaccacgc acttactcct tggatattta aaattttgtt
     1261 ttttatatca tagtttaaag tatttccgtt aataatactt ccattgatca gagctttaaa
     1321 attagtattt gtgtgtaaaa ttttatcctt aggttggtat tctacctctt gagaaataat
     1381 tttgacatta ttagaaccta tataagtaac atttccttca aacaaaacct tgctcatatc
     1441 tttattgaaa aactctaaac gattcgcact aagattaaaa tctaaattta aagtaataaa
     1501 gtcattaaat tcatctctat ctgcatatct cacccaagaa tttgccttat aatatgcctt
     1561 aattgtacta gcattactct cataagcttt caaattttta gcctcaatat ttttaaaatt
     1621 taaagcatta gtttgcaaat tcaaagaata cggatcttgc aaacttaaaa tcgtaaaagt
     1681 aattgtaaaa agagcaatta aaattccaaa aatttttata gccaaagctt attccattct
     1741 tcttttagat gatttttttc tactaaaatt tctatcattt gtgctacagc agccttacca
     1801 ccttgtttgc taagcactat gtctacattt aaatctttat gaccatcttt tggcttaaaa
     1861 ctaagtccta cactttcaag taaagcctta tcgttaaaat aatccccaat agccgcacac
     1921 tgagaaaaat ctaaattaag tttttgtaaa atttcttttg cacaagctaa cttatccttg
     1981 atgccttgat ataaaatttc tatttttaaa tctttagctc ttttttcaac acaaggacaa
     2041 tttctacctg taataatagc aattttttta ccaagcttta gccaagcctc aatagccgct
     2101 ccatctttta catcaaattc tttaataaat tctccattag aagtataaat aatttttcca
     2161 tcagttaaac agccatctac atccaaaaaa atcaattctg tcataatttc tattctctta
     2221 caacaaatgc gcctgcaaat gcaccacttg cagcaaaatc ccttgcttca tcttcacttc
     2281 taaagcctgt taagaaaacg cgatttaacc catccactga acttgtgcgt atagtagagc
     2341 tataagttct ataagtttta tatcttgctg ctatcgtttg tgctccagct gggtttttaa
     2401 aggctccaat ttgaaccatg aaatttccac cttcataaat ttgtccatta tttgcaatct
     2461 ctccactatt tccatagttt acattagaat gtacaatatt attacccgaa ttacttgatc
     2521 caaaccctat aacctcaagc cttactggag ctgttcctga agcaatcata tcaatttgac
     2581 tagcagctcc ttttgataaa tctataatac gattatttac aaaaggacct ctatcattca
     2641 cacgaacggt aacttgacga ttgttattta gattggttac ttttaagatg gtattcatag
     2701 gtaaagtttt atgagccgcg gttaaagcat tttgattata ggtttcgcca ttagaggttt
     2761 tcttgccgtg aaagcctggc ccataccaac tcgcaatacc atcagcagtt tcgcctactg
     2821 ctacgacagt aggataataa gttttaccgt tgatagtata aggcttcatc gttcctttag
     2881 cccctgaaga actaggactg cttttaaaat catttgaagg ataatacact tgagcattat
     2941 ccaagctaga aaaaaaacta gtgcctaaac aaccactaaa aaataaagcc cctagactaa
     3001 cggctgacaa ctttagtgta attgttttta tttgcatttt tattctcctt gattggtata
     3061 attaattttt gattaatgct aagatgattt tttgctattt tattgaattc tcgaatttca
     3121 tcaacactta tattataatt ttttgctatt ttatataaag agtcaccaga cttaacggta
     3181 taagttcttg tcataggtat agttgtatca acctttgcaa gtttttctgc tttaaaattt
     3241 ttatcaaaaa atgctacttt attaagtggt atatacatat aatacccttt accaggaggc
     3301 gtaaaattat gtttaaattg tggattatat ttcttaaaag ttgcaagatc catatttaaa
     3361 tttttagcta tttcttttaa agatgcagaa gaaggcacat caacttttgc aaattcattg
     3421 cttaaagtat aattcattaa agacgcatct ttatctagta aaaaatccct atcattagct
     3481 aaaaaagcaa gcgttaaaat ctttcttata aaatttctag tttctaaaga aagatatttc
     3541 ttatcagggt tcaataaaac acttaaatca tcacttcctg cttgcttgat agcttgtctt
     3601 agcttgccat ttccgcaatt ataagctaaa agtgccaaat accatttgcc aaattcttct
     3661 tttaactctt ttaaataatt tgtagcggca taagttgact tgactggatc acgcctttca
     3721 tcaacataag catcgattct taaacccaaa tttctagctg ttggttgcat aaattgccaa
     3781 acccctacag ccttggcatt agaaacgcta tgagttttca agcctgattc aaccatagct
     3841 agatacaaaa tctcatcagg aacttcctgc tgggctaaaa tttttcttat cataggagta
     3901 acttttgaaa aattttgcat actatctatt aaagtttgag catgttttga ttttatatct
     3961 tgttgagttt gcacaaaaat caaatcacta ataaaacttg gattaatatc taaatttctt
     4021 aaaacattca tttgtctttc ataaaattca ggagtattaa tttgtgcaaa aagaaaatta
     4081 aaacatatta aaaaacacaa taaatttttt ttcattaata acctttaaaa aataattttt
     4141 cagaattgtt aaaacaaatt tctagaagtt cttttcttga taaattcaat acttcacaca
     4201 ttttgtttgc taccaattga gttaacaaag gttcatttct tttaccgcga taaggctctg
     4261 gagtaagata tggagcatca gtttcaagta gtagtctatc ttttggaatt ttaggtaaaa
     4321 tttcaactaa tttcttagca tttttaaaag ttaaaactcc cccaatacca aaataaaatc
     4381 catcttcaaa aagagttagc aaatgttcgc ttgcattaaa gcagtgtaaa actcctccta
     4441 caagatcctt agaataccca tgtaaaatct cataagtatc atgatttgct tctcttgagt
     4501 gaatgataac aggtttttta aattcaatag caagttcaag ctgtgcgata aaaatctttt
     4561 tttgattttc tttttctttt tgaatttctt cagcaagatc acttttaaaa cggaaataat
     4621 caagcccaca ttcacctaca gctacacact tttcatcgca taaatactgc cttaaaattt
     4681 tctcatcata attatcaatt tcataaggat gcacccctgc tgcaaaaaaa atatttttat
     4741 atttatgagc aattgtagct gcataaggca agtcttttat atcagcacca ggtatgatga
     4801 ttttctctat accattttta aaagcacgat ttaaagtttc atctaaatca tctttaaatg
     4861 cttcactgtc tagatggcaa tgcgtatcaa caatccttaa accatcttga aaatcaagat
     4921 ttaagaacat acttcaactc tatctttgcc gttatctttt gcttgagaca atattttact
     4981 tgctttatca accaaagaat caatcttatc tccacttttt ccaaaaacca cgcctataga
     5041 agctgtaaaa aagacttcat ctaaattaac taaaacacca gcttttttta tatttactcg
     5101 tatacgagaa aagattttaa tcgctctttc ttgggatata tttttaagta aaatacaaat
     5161 tttttctgca ctatatctac ctacaagatc tcttccttta gtttcattaa ctatttcatt
     5221 ggcgcagatt ttaattactt catcgccaac ttcacggccg tattcatcgt taatcatttg
     5281 aagattatct atatctaaga aagcaaaagc aaattcctcg tcttttgttg ctatttcgtt
     5341 aaaataatca tctattccat cgattaaagc attataattt ttaaccccag atacaagatc
     5401 taaaacatta taagtgctta aaaatttttt atcatccatg taagataaac aacgatctaa
     5461 gcgacaatta aaactttctt tgcttaaagg cttaaacaaa tactcattaa ctccattttt
     5521 aaaagaattc gcttcaaatg aatcattatg atcccccaaa agaatcacac ctaattcatc
     5581 atcactaaaa cgttctctta cttgagtcaa aagctcaaaa ccgctaatta ctggcatatt
     5641 gacatctgct ataataagct taacatcatt attatcattt aaataactca ttgcttcttc
     5701 accatgagcc gcagctaaaa cattaaattg tctttgagta agtatttttt taatttcatt
     5761 acgttcaggt agcttgctca tagctacaat cactttagtt tttgcatatt gattaagttt
     5821 tacaatagaa ctaataatct catcaatgca agtttcactt tctttaaaaa tataatctaa
     5881 tatatcttta tccataaatt tttctttagt agccttatca ccactagccg taagaacaat
     5941 agcaggaatt ttcttttcta taacataatc cacaacttca ccatttgggg catctggcaa
     6001 gcataaatcc acaaaagcta aaaaataatc attattcatt aactccttag cttcagcaaa
     6061 accaaaagca atatctacct cataatctaa agtcatttga atttttttag ccaaaagttt
     6121 gccgagcatt ttattgtcat caataattaa aattttctta ttcatagtgt gtaaaatacc
     6181 tttatatcta aaatttttta ttatatttgt ttcaaaagaa aggaaatttt tatagttata
     6241 tattttaaca tagcaaaata aaaaatccgc ttaattctta aataaggtct tagcaaattc
     6301 gatcgcttca tcactaacaa gctctccact taccatccta gcaagttctt taattctttc
     6361 ttcttgatca agctttttta ccttactttc ttcaccattt ttttcaacta aaaaatgatt
     6421 atgtgcctta gaggaaagtt gaggcaaatg agaaatagca aaaatttgat aaaacttaga
     6481 aagttcctct aaaaccttag ctatactcat agcctctttt ccgcttaaat ttgcatcaat
     6541 ttcatctaaa aataatatcc ctttgcctgc atttaaaata ttacattctg tagctataaa
     6601 agcaagtctt aagcgattta attcacccga acttaaattt tttaaattag ctaaattaat
     6661 atctagcatt atctcatctt tgcctaaaat tgaaattttt tcattttctt taagcgtcaa
     6721 acttgcatct ttcatataaa gatctttaag ataattattt aaacattttt ctaatttttt
     6781 aaggtttttc tttcttgttt gagataa
//
LOCUS       DARATF010000080         6730 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.080, whole genome shotgun sequence.
ACCESSION   DARATF010000080 DARATF010000000
VERSION     DARATF010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6730
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.080"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            36..614
                     /locus_tag="SB502_001412"
     CDS             36..614
                     /locus_tag="SB502_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434845.1"
                     /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVII
                     LVAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYTIFLLKEN
                     INDLNNTAFQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNK
                     IEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            611..1609
                     /locus_tag="SB502_001413"
     CDS             611..1609
                     /locus_tag="SB502_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434846.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIV
                     DWNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLAYQDGEYFTADNNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIIVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNTQVFKLSEAIDKISFMGNGKFYYGDKILDLL"
     gene            1606..1896
                     /locus_tag="SB502_001414"
     CDS             1606..1896
                     /locus_tag="SB502_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HEG0434847.1"
                     /translation="MIKILEQTIKSLKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            1883..2512
                     /locus_tag="SB502_001415"
     CDS             1883..2512
                     /locus_tag="SB502_001415"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEG0434848.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLSIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            2630..3976
                     /locus_tag="SB502_001416"
     CDS             2630..3976
                     /locus_tag="SB502_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEG0434849.1"
                     /translation="MGQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVGFNQEIIHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFIDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLICNYLGMEFNEDKFSSELL"
     gene            4025..5467
                     /gene="pyk"
                     /locus_tag="SB502_001417"
     CDS             4025..5467
                     /gene="pyk"
                     /locus_tag="SB502_001417"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEG0434850.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRKVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVSIDDQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            5565..6200
                     /locus_tag="SB502_001418"
     CDS             5565..6200
                     /locus_tag="SB502_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434851.1"
                     /translation="MQVNTFSNIASMAQTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIDSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSGKNPLDMNTDELQQLVSEDGFFGVENTVNRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQDTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(6231..>6730)
                     /locus_tag="SB502_001419"
     CDS             complement(6231..>6730)
                     /locus_tag="SB502_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434852.1"
                     /translation="QIHFKNLKLDYRSVFGGPNIAREFYVNLMHIAGLLNLERQKFKE
                     LINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVAAVGA
                     NNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQYKTLPNNFKSEFFTF
                     DINNN"
BASE COUNT         2629 a          937 c         1019 g         2145 t
ORIGIN      
        1 atacaaaaat aaaaatattt tttcaaggat aaattttggg actaaaagat aatttaaaag
       61 ctgttaaaaa tgaacttaac acagaagaac aatttataga aaattttatc aaaggagaga
      121 gatttatacg caagtataaa ttttatatat ctgctgttgt gataatttta gttgcttggt
      181 ttgctggaaa ttttataatc tcaaaaataa acgattataa aacaaaagaa gcaaatgaaa
      241 tttatgccaa tctaatacaa gatcctagca ataaaaatct tttagaacaa cttaaaaata
      301 aaaatactaa tctttacact atctttttac taaaagaaaa tattaatgat cttaataata
      361 cagcctttca aaatgaacta aaacaaattt ataataatgc tcaaacaaac actttactta
      421 aaaatattat tgcattatct ttaggagata aatcaatatt tttaaaaaat tatgataaat
      481 tattagaagc ttacaaactt ttagagcaaa ataaaatcga agaagctaat gttttacttt
      541 ctcagataaa agaaaattca agtttaaatc aaatagctaa aaatctcaaa cattatcaag
      601 gcattacaca atgaaaaaaa tatttttaac actattttgt ttaatatttc tatgtgcttg
      661 tggcaccaaa agacaatatt ttgaaccaaa acaaaccgat ggagatttaa gtcataatag
      721 caatttaaaa agtaaaatcg ttgattggaa tctagtttct gcaaaactta gcaataatac
      781 agctatctta aaaaataata tttccataga caagtttaaa cttcctaaaa attatatgct
      841 tctagcttat caagatgggg aatattttac tgcagataat aatggaaatt taaaaatttt
      901 tgacaattct tataatgaaa tttataattt tcaatttgac gctagtgttg taggagtagc
      961 ttctaatgga gatgatttag cccttgtact tgcaaataat actatagttc ttgcaaatcg
     1021 ttctttgggt attaaattta gtcaaaccct aacctcagct ccagctcaag acagtcgtac
     1081 cgctaatcct atatttttag acaatatcat cgtatatcca acgctagatg gcaaaatttt
     1141 aattctttca agaaacaatc ttcaagtcat taaagacgtg gttatttcgg cagaaaattt
     1201 tttcaacaat gtaatccatc taagcgtaat cggagataaa cttatagcag caacagctaa
     1261 aaaaatcatt attgtaagcc ccgctagaac tctttatctt gatgctgaca taaaagatgt
     1321 tgcacttagc gatgatggta tttttatact agaaaaagat ggcactatta ttaaaactga
     1381 ttataactta agaaaaattg cggaaaaaaa atttgaattt gctatttttg taaaaagtaa
     1441 tatatacaat aattatttat atatttttga aaaaacaggc tatcttatca aaatgaatct
     1501 aaatttagat aatacacaag tatttaaact ttcagaagct attgataaaa tttctttcat
     1561 ggggaatggt aaattttact acggagataa aattttagat ttgttatgat aaaaatttta
     1621 gaacaaacaa taaagtcttt aaaattaaat ttaaagccct atgacttaag tatgttgact
     1681 agaaaaaaaa gttatatttg tgctaaagat caaaataaca ttctttttat gtatacagga
     1741 aaaacaaaat ttttaatgaa agatgcctta tttttagaaa atctagcaca gcaaattaac
     1801 ataaataaca aatatttttt tagcatggct tctctttgct ctaaagcaaa aaatcatcta
     1861 gaaatgaaag gatttaatat ctatgttgct ctgtgatatt gggaattcaa atgctaattt
     1921 cctagatgat aacaaatatt ttactcttag tatagatcag tttttagaat ttaaaaatga
     1981 acaaaaaatt ttttatatca atgtcaatga acatctcaaa gaacatttaa aaaatcaaaa
     2041 aaattttatc aatcttgaac cttatttttt atttgataca atttatcaag gattaggaat
     2101 cgatcgcata gcagcttgtt atactattga agatggggtt gttgtagatg caggtagtgc
     2161 tattacaatt gatattattt ctaattctat acatcttggt ggttttatct taccaggtat
     2221 tgcaaattat aaaaaaattt atagccatat ttcaccacga ttaaaaagtg aatttaacac
     2281 tcaagttagt cttgatgcat tcccgcaaaa aactatggat gctttaagtt atggtgtttt
     2341 taaaggaatt tacctactga taaaagatgc cgctcaaaat aaaaagcttt atttcactgg
     2401 tggagatgga caatttttag caaattattt cgatcacgca atttatgata aacttttaat
     2461 ctttcgagga atgaaaaaga ttataaaaga aaatcccaat ttactttatt aaaaatgtta
     2521 caaaaattct cattgatatc aaaccttaat gaaatttaac tttttgtaaa acaaattcaa
     2581 ttaaacttta tttagaaaaa agtttattaa aataaaaaaa ggaaaaacaa tgggtcaaca
     2641 agaatttgat gtgcttgtca tcggagctgg aatttcggga gcagcattat tttacgagct
     2701 tgcaagatat acaaatatta aaaatattgc tttgatagaa aaatataata cagctgcaac
     2761 attaaattct aagggaacga gtaattctca aaccattcat tgtggagata ttgaaaccaa
     2821 ttatacttta gaaaaagcgc gaaaagtaaa aagaacagct gatatgatag ttaaatatgg
     2881 actcatgcaa aatgcgcaaa ataatttcat gttttctcat caaaaaatgg ctctagctgt
     2941 tggagatata gaatgtgatt atatgaaaaa acgctatgaa gaatttaaag aactttatcc
     3001 ttatataaaa tttttcgata aagcaaaaat caaacaaatt gaacccaagg ttgttttagg
     3061 agaagattgc aatcaagata gacctgaaaa tatctgtgcc atgggtgttg aaagcggcga
     3121 ggtttttaca actgtagatt ttgggaaaat gagtataaat ctaatagaac aagcccaaaa
     3181 acaaaataaa aatactttcg ttggctttaa tcaagaaatt attcacatag aaaaaaaaga
     3241 tgatattttt atattaaaaa cctcaaatca tcaagaatac catgccaaaa gcgtagttgt
     3301 caatgctggg gcgcactctt tatatttagc acataaaatg aacttaggta tggataagtc
     3361 ttgttggcct gttgcaggaa gtttttattt aaccaaacaa aaacttttaa atggcaaagt
     3421 ttatatggtg caaaatccta aacttccatt tgcagccctt catggagatc ctgatttgct
     3481 tgctgatatg aacactcgct ttggacctac tgcacttgtt attccaaaac tagaacgtta
     3541 tcatggtcta aaatcagttc cagaattttt tgaagcacta aaacttgata aaactgtttt
     3601 aaaagtaact tttaatatgt ttaaagatgc aacaattaga aattacatct tttataatta
     3661 tctttttgaa ctacctttta ttgataaaag cttatttgtt aaagatgcca aaaaaatagt
     3721 cccaagtctt aaagcaagcg atatttatta tgcgaaaggt tttggaggcg taagaccaca
     3781 agttattgat aaaactaaag gagaattaat gctaggtgaa gcaagcatca cagaaacccc
     3841 tggtattatt ttcaatatga ctccaagtcc tggggcaaca agttgtttag gaaatgctga
     3901 aagagatgca aagcttatat gtaattacct aggaatggaa tttaacgaag ataaattttc
     3961 ttcagaatta ttgtaatcat tttgtttcta tttttagcta caataatttc aaaaggagtt
     4021 taccatgctt aaaaaaacaa aaattgtagc cacagtaggt ccagcaagtg aaaaggaaga
     4081 aattctacgc caaatgatta tcaatggtgt aaatgttttc cgtttaaact tttctcatgg
     4141 aacacatgag tatcataaaa aaaacttaga taccataaga aaagtagcta aagaattgca
     4201 tactcgtatt ggaattttac aagacattag cggtcctaaa attcgtacag gtgaacttaa
     4261 agaaccattt gaattaaaaa agggtgatag acttgatttt tatcgtgaaa caattttagg
     4321 ggagaagatt gctcaaaatc attacaaaat cagtattaat caaaaatcca ttttagatat
     4381 gttaaaaatt gatgaatata tttatctata tgatggatca attcgtgcta aagtagtaag
     4441 catagatgat caaaaaattg aaaccattat agaaaatgat ggttttttaa actcaaataa
     4501 aggtattaat tttccgaata ctaaaatcaa tattgatgtt attacacaaa aagataaaaa
     4561 tgatttactt tggggtataa aaaatgaagt agatttttta gcaatatctt tcgtacaaaa
     4621 tgcgcacgat attgatgaag ttcgtgaaat tttagcacaa aataacgcaa aaatatctat
     4681 ttttgcaaaa attgaaaaat ttgatgcagt agaaaatatt gatgagatta ttaaatctag
     4741 cgatggtata atggttgcaa gaggagactt aggtattgag gtaccttatt ataaagttcc
     4801 taatatccaa aaagaaatta tacaaaaagc aaacaatgcc tctaagcctg ttattactgc
     4861 gactcagatg cttttttcat tagccaaaag caaaaccgcc acaagagctg aaatttcaga
     4921 tgttgcaaat gctgttttag atggaacaga tgcagtaatg ctaagtgaag aaagcgccgt
     4981 tggtatagat cctgcaaacg ctgttgatat aatgtgccaa actataatag aaacagaaaa
     5041 acgctatcca tataacaaat ttaatgattt taatgattta gacaatacag ataaaatcat
     5101 gcgttcttca gctcatcttg caacagatct taacgctgat gctatttttt ctttaacaag
     5161 tagcggaaaa tctgctatta agattgcaag atatcgtcca aatatagaaa tcatagcagt
     5221 agggcattct gaaaaaacct taaactcttt aagtatagtt tggggagtta atcctgcaat
     5281 cttggttaac aaaagtaatg aacttacaga attattaaaa gactctgtaa gatcaagtgt
     5341 tgaaaaaggt tttatggatg aagacaaatg ctatcttcta actgcaggct ttccaacagg
     5401 agtagaaggt actagcaatc ttatccgcat tctcaataaa gagcaaattg cttattatct
     5461 acaataaaac attaaattcc tttgaaaata aggaatttaa tgtccttata aattttttaa
     5521 gccaaaagtc gatataaatt aaagcctcac acaaaggagc aaatatgcaa gtgaatactt
     5581 tttcaaatat cgctagcatg gcacaaacac aagttagcaa taagaaggca gatgatgcta
     5641 aggaaaacac aaaagacaaa aatgttcaaa gtgctaattc tagcaaggat gtagataaaa
     5701 atacccttga aaaattaaat gcacttggtg gaaaaggcat tacacaaatt tacctagttc
     5761 agtttcaaca gcaaacaatg aatgctgtaa tagattcgag caatgcccaa actggactag
     5821 atagtctttt aaatggtgcc aatttagata ctgcgaaatc tatacttaca aatattgatt
     5881 ttgcatcctt aggctacagt ggcaaaaatc cacttgatat gaatacagat gaacttcaac
     5941 aacttgtaag tgaagatggt ttttttggag tggaaaatac agtcaatcgc atcgcggatt
     6001 ttgttattaa aggcggtggc gatgatgttg aaaaattaaa aaaaggtctt gaaggtatga
     6061 aaaaaggatt tgagcaagca gaaaaaatgt ggggtggaga acttcctcaa atcagtcaag
     6121 atacaataga tgcggcactt aaaaaagtta gcgatcgcat cgatgaacta ggcggaaaaa
     6181 ctctagatct tcaagcttaa ctaaaaatgc ttagaaattt ctaagcattt ttagttgtta
     6241 ttaatatcaa aagtaaaaaa ttcactctta aaattattag gtaaagtttt atactgagat
     6301 atcgcagctt catagttctt tacttcttga tacaacatac caagagctgc tttactctct
     6361 ttgttatttt tatctgtaag tttagaaagc tgcaaaagcg ctatagctga atttggatta
     6421 tttgcaccta cggctgctac ggctgctaaa aataaagttt tagtatcttt agctccataa
     6481 tcatcaatca aagaattata aagcgcataa gcctcctcgt attgctgtgc aaaaatatcc
     6541 aaataagcta aagtttgtaa aataccctca tcttttgctc ctgaaacatt aatcaactct
     6601 ttaaatttct gtctttctaa atttaaaagc cctgcaatat gcattaaatt aacataaaat
     6661 tccctagcta tatttggccc accaaaaaca ctacgataat caagttttaa atttttaaaa
     6721 tgaatttgag
//
LOCUS       DARATF010000081         6718 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.081, whole genome shotgun sequence.
ACCESSION   DARATF010000081 DARATF010000000
VERSION     DARATF010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6718
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.081"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(13..102)
                     /locus_tag="SB502_001420"
     CDS             complement(13..102)
                     /locus_tag="SB502_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434853.1"
                     /translation="MFQNIIKYKDFIIFILNLKQNLYLLIKIN"
     gene            224..1009
                     /locus_tag="SB502_001421"
     CDS             224..1009
                     /locus_tag="SB502_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEG0434854.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNFINF"
     gene            1082..3907
                     /gene="uvrA"
                     /locus_tag="SB502_001422"
     CDS             1082..3907
                     /gene="uvrA"
                     /locus_tag="SB502_001422"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEG0434855.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSVSDIVSEILKFPKDAKIIIYAPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEEQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKSLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRTQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCEGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTRSYTGYYLDLELKNTQKS"
     gene            3912..4355
                     /locus_tag="SB502_001423"
     CDS             3912..4355
                     /locus_tag="SB502_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0434856.1"
                     /translation="MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF"
     gene            complement(4311..5318)
                     /locus_tag="SB502_001424"
     CDS             complement(4311..5318)
                     /locus_tag="SB502_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEG0434857.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILSSKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFKRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVSKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLIPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYAYKTRGTKGTWIHDALTIAYALDSSIADFDECYADVICDSSL
                     ARGMSWRCFKEPKMSMGVDLSTKNCVKILKNVDNAKLLKLIKERFLKGVCYENYESIT
                     T"
     gene            complement(5315..6676)
                     /locus_tag="SB502_001425"
     CDS             complement(5315..6676)
                     /locus_tag="SB502_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HEG0434858.1"
                     /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALY
                     GLAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGYLGDKHGRKNVMMS
                     TVALMGISTTLIGFIPSYAVIGVWAPICLVILRFMQGFGAGAELSGGTVMLGEYAPSK
                     RRGLVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIR
                     FHVKETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLA
                     QGFIVGYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDRFGRRITYRMFCLLLM
                     IYAFPAFMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAK
                     ELGSILSGGTAPMVASALLAYYGTWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIE
                     DAI"
BASE COUNT         2380 a         1131 c         1050 g         2157 t
ORIGIN      
        1 atttttaaag tcttaattaa ttttaatcaa taaatataaa ttttgcttta aatttaaaat
       61 aaatattata aaatctttat attttataat attttgaaac atttttacga tgcttaaagt
      121 taccaaaaaa tattctattg ttataaaaaa ctaagataat acttagctta ataagataaa
      181 attattccgt atttgaaata tttaatattt tttaggaaaa gctatggaaa tcacagattt
      241 accttatcta atcataggaa tcatttcagg tattgcttct ggactttttg gcattggtgg
      301 aggtatgatt atcgttcctt ctatgttcgc acttggagca agtgctcacc atgctatcgg
      361 aatttcagta ttgcaaatga tttttgcagc agtttttggc tcttatatta attataagaa
      421 aaaaaatcta aatcttaaag atggtattat gataggtttt ggagggctca taggggcaag
      481 ctttagcgga atgcttttaa aagctttaag tgatgtagct cttactagcg tatttttggc
      541 ggtaagttgt atatttttta tcaaatatgc ttttggaatt aaagaaaaca ttgtgcaaaa
      601 tcaaagaagc gtttgggtaa agaatgtcat tttatttatt gctggagctt ttactggtat
      661 ttttgctatt tctttgggaa ttggtggcgg acttttaatt gctccgattt tagcttattt
      721 tttaggctat gatagtaaaa aagttgtttc cttatccttg ttttttgtta tttttgcttc
      781 agtctctggt attatatctt tttcaaattc tggagttata gactctgaag ttattcataa
      841 aggaatacta gtaggtatag cttctatggt tggagttttt ataggaatta aaatcataga
      901 aaaaatgcat atttcagctc atagaaaaat tttactttgc gtatatgcct tgtcaatact
      961 tggaaccacc cactctttgc ttaataagct aaattttata aatttttaac ttggatttat
     1021 ccaagttctt ttaatattat tatgctaaaa tcttaaattt atttaatgtt taggaaagac
     1081 tatgaacgat accataaaaa tcattggcgc aagagaaaat aacctaaaaa atatccacct
     1141 tgaaattccc aaaaacaaac tcattgtttt tacaggactg agcggaagtg gaaaatcaac
     1201 ccttgctttt ggaactcttt atgctgaagg acaacgccgt tatatagaaa gtttaagtgc
     1261 ttacgccaga caatttttag ataaggtagg caaacctgat gtcgataaaa tcgaaggttt
     1321 aactccagcc attgccatag atcaaaaaac tacttctaaa aatccacgct ctactgtagg
     1381 aaccatcact gaaatttatg attatctaag acttttatac gcaagagttg gcattcaaca
     1441 ttgtcatcaa tgtggacaaa aaatttcatc tatgagtgta agtgatatag tcagtgaaat
     1501 tttaaaattt ccaaaagatg caaaaatcat catctacgcc ccactcatac gagaaaaaaa
     1561 aggaacttat gcagatttgc ttgaaaattt acgcaacaaa ggctatgtaa gagctcaaat
     1621 tgatggagtt ttggtaagac ttgatgaaga aattgaacta gccaaaacca aaaaacacac
     1681 cattaaactt gtcatagata gacttgaaat tcaagaagat ttactttctc gtcttgcaag
     1741 cgatatagaa aaaggtttac aggaaagctt tggagaaata gaaatagaag ttttaaatca
     1801 tgaggaaata aaccttaata aacactatca ttttagcgag cattcagctt gttttgattg
     1861 taaaatttcc tttgttccac ttgaaccttt aagcttttct tttaattctc caaaaggagc
     1921 atgtgaagct tgcgatggac ttggaattcg ttatacttta gatatgaaaa aaatcatcga
     1981 tgaaaattta agtctcgaaa acggtgctgt taaaatcatg tatggtttta ataaaagtta
     2041 ttattataaa ttcctaatcg ccttttgcga acaaaatgaa attcctatca aaataccttt
     2101 tatgcaatta aacgaagaac aaaaacgtct tgtattgtat ggtaatgcca aaactataga
     2161 atttctttgg aaaagaaatc gcctaaaacg cacttttgaa ggcgtggtta aaatggctta
     2221 tgaaatgcta aaagatgaaa aagatttagc cgaatatatg agtgaaaaaa tttgtaaaga
     2281 ctgcggtggg catcgtttaa aacccgaaag tttagccgtg aaagtagcca aaaaaagctt
     2341 gggtgaaatt ttagatatga gcatagaaga tagtacggcc ttttttgcag atgagaaaaa
     2401 tttttcttat ttaagcgagc aacaaaaact tatttctaaa cctatcctaa aagaaatcaa
     2461 cgaaagattg tttttcttgt atgatgtggg gctaggttat ctttctttag ggcgcgatgc
     2521 aagaacgatt agtgggggtg aagcacaaag aatccgcata gcttcacaaa ttggcagtgg
     2581 tttaagcgga gtgatgtatg tcttagatga gcctagcata ggacttcatg aaagagatac
     2641 tgcaaaactg attaaaactt taagaaattt acaacaaaag ggcaataccc taattgtcgt
     2701 agagcatgat aaaatgacca tagaagaagc agattttatt gtagatattg gtccaaaagc
     2761 aggaaaattt gggggtgagg ttgtatttag tggaacttat aaagaacttt taaaaagcaa
     2821 aagcgaaact gcactttata tgaatggtaa aaaacaaatt tcacaacttc aaaacagaac
     2881 acagaaagaa tggcttgagc ttaaaaatgt aaatattaac aatatccaag atttaagcgt
     2941 aaaatttcct ttgcaaaatt tagtcgctat aacaggagtt tcaggttctg gaaaaagctc
     3001 tttgatactt caaaccctac ttccttttgc acaagaggaa ttaaaccgtg cgaaaaaagt
     3061 taaaaaactt ggcggagtac aaatagaagg acttgaaaaa cttgataaag tcatttatct
     3121 tgatcaaagc ccaattgggc gcacaccacg ttcaaatcct gccacctata caggtgctat
     3181 ggatgaaatc agaaatcttt ttgccgccac taaagaagcc aaaatgcgtg gttataaagc
     3241 tggacgcttt tcttttaatg tcaagggtgg aagatgtgag aaatgtagcg gagatggaga
     3301 aatcaaaata gaaatgcatt ttttacctga tgttatggta gtttgtgata cttgcgaggg
     3361 caaacgctac aatgatgcca cgctagaaat caaatataaa ggcaaaaata tcagtgaaat
     3421 tttaaatatg agtgttttag aagcgagtga attttttaca gccgttccta aaatcaaaca
     3481 aaaattagat actctagtaa aagtgggttt agattatcta actctaggac aaaatgccac
     3541 caccttaagt ggaggtgaag cacaaagaat caaacttgct aaagaactaa gccgtagcga
     3601 tacaggaaaa acgctttata tacttgatga acctacaaca ggactgcatt ttgaagatgt
     3661 caataaactc atcttagttt tacaacattt agttgatctt aaaaattctg tttttgtgat
     3721 agaacataat ttagatgtga ttaaaaatgc tgattatatc atcgatatgg ggcctgaagg
     3781 cggagttaaa ggtggaaaag ttataagcac aggaagcgtg gaaaaagtcg ctaaagaaca
     3841 caaaaaaacc cgttcttaca caggatatta tctagactta gagcttaaaa atacacaaaa
     3901 atcataattt tatgtttgat tttttatata atgatattag ctatttgggg cttttcatgg
     3961 tgtgttttct ttcaagcaca ctattaccct tagcaagtga agcctttgtt ttaggcttta
     4021 taaaacttga ttttaatccg aatttggtac ttatcgtagc cactttgggt aataccttag
     4081 gaagtttaag tacttatgct ttagcgtatt ttggaaaaga aaaaatttta gaaaaatact
     4141 ttagcaaatc cttaaaaaaa ttagaaaatt tcaatgctaa ttttgctaaa tttggaagta
     4201 tatttgcttt ttttactttt ttacctttag taggagatct ttttgccttg ggacttggtt
     4261 ttgcgaaata ttctttttta aaaactatat tttttatctt acttggaaaa ttaagtcgtt
     4321 atgctttcat aattttcata gcaaactcct tttaaaaacc tctcttttat aagttttaaa
     4381 agctttgcat tgtctacatt ttttagaatt ttaacacaat ttttagtgct taaatccacc
     4441 cccatactca tttttggttc tttaaaacaa cgccaactca tacctcttgc caaagaacta
     4501 tcgcaaataa catcagcata acactcatca aaatctgcaa tactagaatc taatgcgtaa
     4561 gctatcgtta aagcatcatg tatccaagtt ccctttgtac cacgtgtttt ataggcataa
     4621 tcaatccaaa cacctaaagt ttcaacaata aaatcacata aaatattctt accttgcaac
     4681 tcttttaaat cctcgtgtgt taataaagtc tgcatggttg cattataagg tatgagtgta
     4741 attttagctc ttgaatttag cactatacta gccgcctcag gatcaaaacc aaaatttgta
     4801 tctttagtgt aataaggcat atcaaaactg ccgcccataa taaaaagctc tttaagattt
     4861 atatcaaaat ctttaaaaat tttcatagtc atagcgatat ttgtcaaagg tcctatcgca
     4921 caaatagaaa tttctttagg atttttactc accaactcac ccattttaaa aatcgcatca
     4981 ggatttatat tttctaaaat ttcaggactt tttatatttt cccaaagata ttcaagttta
     5041 aaatttttaa cactttcatc aagtctttga cgccaagctt tacttggttc ttttagggct
     5101 tcattcgctc ccaaataaac tgggatattt aaatttaaac gtttaaataa atccttagcc
     5161 acactatagg caacaaggct tggaacatta ccgcaaactg tgcttagcat ttcaagtttg
     5221 atttctttag atgacaaaat caaagcaagc gctaaaccat catcggtatt tgctcctgca
     5281 atagcattgc ctatatctgt gtctaagata agtctcatat cgcatcttct attttattta
     5341 aatctctacc tctagtttct ggcgcaaaaa atgtagtcac aaaacctata cctgcagtta
     5401 atacaaaata tgtcgcaata ggccaccaag tgccataata cgcaagcaaa gcagaagcca
     5461 ccataggcgc tgttcctcct gaaagaatag aacctagctc cttagcaaaa gccatttttg
     5521 tataacggtt ttttacccca aaaagttcta caccccaagc cgcttgtaca ccaaaaatcc
     5581 ctaaagatgc taaagacata cctacaataa tagttaaaat cacaataatt tcatttttac
     5641 tatctaaaag cataaaagca ggaaaagcat aaatcatcaa aagtaaacaa aacattctat
     5701 aagtaatacg tcttccaaat ctatcactta aataacctgc caaaggaata accaaaaaac
     5761 ccaccaatga agctatcatc actgctgtag tagctactga tttgtctaaa agtaaaattt
     5821 tagtcacata acctacaata aaaccttgcg caagataaga aggtccattt tcacctattc
     5881 ttaagcccac catagtccaa aaagcacgac ttctttgcca aaaacttctt tcatcttttt
     5941 tcatatgctt ttcgttatta agacgcaatt tcatcatttc atttttttgc ttttcaaaaa
     6001 caggggtttc tttgacatga aaacgaatat atacagcaaa aagagcgatt aaaatacttc
     6061 ccataaaagg aactctccaa ccccattctt taaaacttgc ctcatccatt tgcaccatca
     6121 aaagccacac aaaagacgca agtaaagttc cactatttga tcctaaagca atcacagaag
     6181 aaacaagccc tcttctcttg ctaggagcat attctcctag cataactgtt ccacctgaaa
     6241 gttcagctcc tgcaccaaaa ccttgcataa aacgtaatat aaccaaacaa ataggcgccc
     6301 aaacaccaat tactgcataa cttggaataa aacctatgag agtagttgaa attcccatta
     6361 aagcaacagt actcatcata acattttttc ttccatgttt atcacctaaa taaccaaaaa
     6421 acaaagcccc aataggtctt gcaataaaac ctatgccata agttacaaaa ctaagcaaaa
     6481 gtgcgattac tggagtttgc tcaggaaaaa atacttctga aaaaattgtt gcagctgcta
     6541 aaccataaag tgcaaaatct gcatattcca tagcagttcc caaccagcaa gaaaaaactg
     6601 cctttttaaa aactttccta ccttcaggtg tattaaaatt cttatccgca attccatcaa
     6661 tttgctgatt tgtcattaca ttatccttat attttaatat atttttttat aaataatt
//
LOCUS       DARATF010000082         6672 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.082, whole genome shotgun sequence.
ACCESSION   DARATF010000082 DARATF010000000
VERSION     DARATF010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6672
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.082"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            89..1948
                     /locus_tag="SB502_001426"
     CDS             89..1948
                     /locus_tag="SB502_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEG0434859.1"
                     /translation="MALDEKIIAYTENPARELLSVTSRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIIAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIIVDENEVVLKHA
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDE
                     EFAILGEQISKLNHKINKIRQYILSSKNGILSVEKKITELKNQGQNVPVQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFYSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            1924..2475
                     /gene="ruvA"
                     /locus_tag="SB502_001427"
     CDS             1924..2475
                     /gene="ruvA"
                     /locus_tag="SB502_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEG0434860.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLGDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLASAQATSTSELIKEALKKLG"
     gene            2485..3525
                     /locus_tag="SB502_001428"
     CDS             2485..3525
                     /locus_tag="SB502_001428"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEG0434861.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFIFCDEERRFY
                     HIPSEKMNSKTFSTKAYKKEKELFIKQGGFFSKGFLKENKLECECVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTMLRKNQNSKEKLS
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEANLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEIYLNEINPNPGSLANYLFKDFSTTLNALADQISLEKMIKISYN
                     FLHSINGQKGKL"
     gene            3585..3800
                     /locus_tag="SB502_001429"
     CDS             3585..3800
                     /locus_tag="SB502_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEG0434862.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VILSMKEFERLQNAMQLLENIYKNQKA"
     gene            3802..4521
                     /locus_tag="SB502_001430"
     CDS             3802..4521
                     /locus_tag="SB502_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEG0434863.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGANKELMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL
                     SPMMYETFKRVVDEDFSEIFAKQKAKSLVFWGESDESTPLYCGEKMHQFLKNSTFYPL
                     EGNHFFFLKHSAFIAQKIKEI"
     gene            4522..5949
                     /locus_tag="SB502_001431"
     CDS             4522..5949
                     /locus_tag="SB502_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEG0434864.1"
                     /translation="MLVNTLYFINSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLAYFALIHTPILYFWNKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFAILALRFSFLFNLFSLPFALFSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINTNLSQDTQIYIAEAGAR
                     LKGDIDEITRFLQPHISIVGEIGNAHLEYFKSVENIRSTKLEALNSKRLEKAFLHSST
                     QKEEDKLINLYDDKLSLIHSSLEGLEFKIDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYKLCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKHGDLILFSNDAPSFM"
     gene            complement(6007..>6672)
                     /locus_tag="SB502_001432"
     CDS             complement(6007..>6672)
                     /locus_tag="SB502_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434865.1"
                     /translation="ISELSSDKTIGIMPKNYDKLTITNYYNTQEQYNEAEQLGMFGHI
                     NIGLQPLNFTPQSMQTQNLDKDTAIDTFNPDMSVYPQNEDGSYSKEALFMSFLKSTGV
                     SPREGSATLNPIAKSYAEAMAKESFDGSLTSLDDIMTGKVDFASLLKGYAQDGWLDAD
                     IYAMEKGVAWQNTSIGYGGAWFDREFNQAKANGWKASNESINSFVNNIMDRLNNLIGQ
                     TRV"
BASE COUNT         2528 a          951 c         1015 g         2178 t
ORIGIN      
        1 atttcaaaat ataaagagaa ctattttaac taaaattgat taaaagttga ctataattac
       61 attcttaatt ttttacaagg ggaaagtttt ggctttggat gaaaaaatta ttgcctatac
      121 agaaaatcca gctcgagagc ttttaagcgt aacttcacga acaaacctta gcttaaatga
      181 gcttgatttt agtttattgg cattttctac acaatatcgc tttggagatt tagaatggga
      241 aaaaatctct gaaaaagaat taactctttt tgataaagat gaaatttttt taaaaaatga
      301 tcttcaaatc aagcaagaat acaaaataga aattttccac ggtataaacc aaagcaaagc
      361 atctcaagca gtcaaactag ttgcgaataa aaatttaacc aaaataattg ctcaaattga
      421 ttttacaaat ttagactttc atgaaaaact agcactagaa cttttgcaaa atatttataa
      481 aaagatgttg aaacttaaat ttttaatagg tatccgcatt tttgatttta agaaaaattt
      541 aatgtctttt tgcaaccaac ataaaaacac tcctttaaat aaaactatac aaatcaccgt
      601 tgcacaaggt attgatccta tagaaagtca agatgaatcc ctgatcttga cttataaaga
      661 aaaaaccaaa aactacacta tcgatgaaaa acgctcaggt attattattg ttgatgaaaa
      721 tgaagttgtt ttaaaacacg ccaaatttaa acaaggtaaa gaaggaaaag acttaaattt
      781 acacacctta aaagttttag ccgcaaatga aaataaagtt aaattttctt gttcttcagc
      841 ttttaaacaa gtagagcaag atggatacac agaatatata gctttaaaaa aaggttatgt
      901 agtacaagat ggtgaaaaat ttgatattgc caatgaacta gattttaatg gagtagattt
      961 taaaaatata gggattataa gagctggact agacaaaaat gtcaaaatca atataaaatt
     1021 tctttcagaa gtaaaagatg ctgtaaattc tggcgttggg atagaatgtg aagaattaaa
     1081 tgtagtcgga agcgtaggaa gcaacactca acttaatgcc actaaaatga aaattgaagg
     1141 cactacacac tctaaagcca aaattcaagc caaacaagcc tatataaaaa ctcatagagg
     1201 atttgcagaa gccgaaattt taaatataga tttgctcgaa ggtggaacaa tcaaagctaa
     1261 agaagtgaga attaaaaaaa gcttaggtgg aaatatacaa gctgataaaa tctatataga
     1321 aaatttagaa agtaataatt cttgtgtgtt ttttgaaaac accacaatag aacgcattaa
     1381 cggggataac aataaatttc atgctaaaat taaaactctt gataaaaatt atgatgaaga
     1441 atttgcgatt ttaggagagc aaatttctaa gttaaatcat aaaataaata aaataagaca
     1501 atacatttta tcaagcaaaa atggaatttt aagcgttgaa aaaaagataa cagaacttaa
     1561 aaatcaaggt caaaatgttc ctgtacaata cgaaaaagcc ctaaaagatt tctctttgca
     1621 aaatcttgaa ttaaataaac tacaaaatga agaaaaagaa cttcttgaac gcaaaaaatc
     1681 tttacaatta gaattaatca atttgcaaaa aatgcttttt gaagcaactt ttataaataa
     1741 aagtggcaaa tggactgata tgaatgaaat caaattttca cttctagagc ctaaagaaga
     1801 tattttttac tcttcatttg ttaatgaaag tgctaaattt ataggcatta aaaaagtcat
     1861 acaaaacaac caagaaagta tagaaataca taaaaaatta gattatgaag aaaaggatat
     1921 agcatggttg tcggcatcga aggaataatc acaaaaaaag aacctacttt tatcattgtt
     1981 aaatgcgcta gtggtttaag ctatgggata tttatttcgc ttttttgttc tgctaaaatt
     2041 caaactcaag aaaagcatga gttttttatc actcaaatca tcaaagaaga ttctaataaa
     2101 ttttatggct ttttagataa agatgaacaa aaaatgtttg aaatgctttt aaaagtcaat
     2161 ggagtgggtg caaatactgc tatggcggta tgctctagtc ttgatgtaaa ttctttttac
     2221 aaagcgttaa gtttgggcga tgaaagcgtg cttaaaaaag tacctggcat aggtccaaaa
     2281 agtgcaaaac gcattatagt agaactttct gacacaaaaa ccaaacttga aaatgtaagc
     2341 gatgataaaa gcgaagcctt agccgcactt cttactctag gctttaaaca agaaaaaatc
     2401 ataagtgttt tagcaagtgc tcaagcaaca agcacaagcg aactcatcaa agaagctctt
     2461 aaaaaactag gataaaggaa taaaatgaaa tttgcaatac tttttggcgg aaattcttat
     2521 gaacatgaga tcagtatagt aagtgctgta gtacttaaaa aagttatcaa tcaaaattta
     2581 gaatttattt tttgtgatga agaaagaaga ttttatcata tcccaagtga aaaaatgaat
     2641 tctaaaactt ttagcaccaa agcttataaa aaagaaaaag aacttttcat caaacaagga
     2701 ggttttttta gcaaaggctt tttaaaagaa aataaactag agtgcgagtg cgtgatcaat
     2761 cttatccatg gtagagatgg agaagatgga aaaattgcgg ctttatttga gttttattct
     2821 attaaattta taggacctag gcttgaagcc agcgtattat cttttaacaa ggaacttact
     2881 aaactttatg caaaaagcgt tggagtaaaa acacttgatt ataccatgct aagaaaaaat
     2941 caaaactcta aagaaaagct tagttttcct tgcattatca aacctgcaag acttggaagt
     3001 agcataggta ttagtatagt gaaagatgaa aaagatttag aatacgccaa agatgtaggt
     3061 tttgaatttg ataatgatct tgtagtggaa gaatttaaaa acaatatcaa agaatacaat
     3121 cttgcaggat gtatgatcaa tgatgagttt gttttttcca tcatagaaga gccaaagaaa
     3181 aaagaatttt tagactttga acaaaaatat cttagctttt caggacacaa tgagcttata
     3241 gaagcaaatt taagcgaaga attaaaagaa aaactcaaag atagttttaa aaagatctac
     3301 aatcctttgt ttaaaggtgc tttaatacgc tgcgattttt ttatactgga taatgaaata
     3361 tatttaaatg aaatcaaccc aaatcctggt tctttggcta attatctttt taaagatttt
     3421 agtactactt taaacgcttt agctgatcaa atttcacttg aaaaaatgat aaaaatcagc
     3481 tacaacttcc ttcactctat caacggacaa aaaggaaaat tataagcttt taagtcaaaa
     3541 tacgctaaat tatacataaa atttagcgta ttttaggaag aaaaatgctc tcttttaaac
     3601 aagatgaaat ttacactgcc accgaagtgg taagaaattt tagccccatt atggaaaaac
     3661 tcaaaaaaag cgaaagtgga aaaatagtta ttttaaaaaa taacaaattt gaagctgtaa
     3721 tacttagtat gaaggaattt gaacgcttac aaaacgccat gcaactttta gaaaatatct
     3781 acaaaaatca aaaggcttaa aatggctcag actcaacttt cttataaaaa caaaacttat
     3841 caaatttctt atgaaatttt aggtgatctt tccttaccgc aaatacttat cttacacggc
     3901 tggggagcca ataaagaact tatgaagcaa agtttttgtc cttttttaaa agatttttgt
     3961 caaatttata tggatttggc gggttttgga aattcaagcg tggaagaaat tttaaacact
     4021 caagattacg ccaatatcac agaacttttt ttaaaacaaa aaaaactcaa tgtctgtttt
     4081 ttcatggggc attcttttgg cggaaaagta agtaccctac tcgcaaaaga aaaagacact
     4141 ctaatcttac tttcaagtgc aggaattttg gctaaaaaat ctctaaaagt gcgttttaaa
     4201 atccgtattt ttaaaatttt aaaactcttt ggtttgggaa aattttatcg ctattttgct
     4261 agtaaagatg gagcaaatct tagtcctatg atgtatgaaa cctttaaaag ggttgttgat
     4321 gaggatttta gtgaaatttt tgccaagcaa aaggctaaaa gcttggtttt ttggggggaa
     4381 agcgatgaat ctacgccttt gtattgtggt gaaaaaatgc atcaattttt aaaaaatagc
     4441 actttttatc ctttagaggg aaatcatttt ttctttttaa aacattctgc tttcatagct
     4501 caaaaaatta aggaaattta aatgcttgtc aatactcttt attttattaa ttctttattt
     4561 tttaattttt gtatagcttt ttatcttatg agtgctttac aatggtattc ttataaattt
     4621 aaacgcgtgt tttttcatta tcataaacct ttgtggcatt tgtatttttt atttattcct
     4681 tattttttat tcttagcttt tcctttatac tctttggcat attttgcatt gatccatact
     4741 ccgattttgt atttttggaa caaaggtata gataaaaagc ttgtttttac aagtaaggtt
     4801 aaatggtttt ttgtttttgt ttttgtttat aatgctattt ttgctatcct tgctttgcgt
     4861 ttttcttttc tttttaatct ttttagcctt ccttttgctt tatttagtct taaaatttat
     4921 gagtttttta caaatttata ttataaaaaa caagccaaag ccaaactaag agccaatgaa
     4981 aatttaaaaa tcatactcat taccgcaagt tttggaaaaa caagtattaa aaatttttta
     5041 tacgaacttt taaaagatga ctttaaaagc tacaaaacac cacgctctgt caataccttg
     5101 ctaggcatag ttgctgatat caacaccaat ttaagccaag atactcaaat ttacatagct
     5161 gaagcaggtg ctagacttaa aggcgatatt gatgaaatca cgcgtttttt acaacctcac
     5221 atcagcatag taggagagat aggcaatgca catttagagt attttaaaag tgttgaaaat
     5281 atccgctcaa ccaaacttga agccttaaat tccaaaagac tagaaaaggc ttttttacac
     5341 tctagcaccc aaaaagaaga agataagctc atcaaccttt atgatgataa attaagtctt
     5401 attcattcaa gtcttgaagg tttagaattt aaaatcgata tagaaaataa atcctatgat
     5461 tttaaaagtc aaattttagg ggattttaat gcgcaaaatc tttgtgtttg tatactttgt
     5521 gctcattatc ttggcataaa actagaaaaa attcaaaagc aagttttaaa tataaactcc
     5581 gtagaacatc gcttgcaagt gctttcaaga gagcctaaat ttatcataga tgatggtttt
     5641 aatggaaatt ttaaaggtat gagcacaagc tataaacttt gtaaaagcta taaaggacgc
     5701 aaagttttag taagtcctgg tatagtggaa gtaagcgaag aagaaaatat aaaacttgct
     5761 aaaatcatca atgagtgttt tgatcttgct atcattagtg cacaaatcaa tgctgaaatt
     5821 ttcaaaaaag agttaaaaat aaaaaccatt atacttaaag aaaagagtca gctagttcaa
     5881 actctagcta aagaaacaaa acacggagat ttaatactct tttcaaacga tgcacctagc
     5941 tttatgtgat ttgctaagta tttgcaaatg tcatcatttt taatttgact tcgtgcaaat
     6001 acttctttaa accctagtct gccctataag attattaagt ctatccatta tattatttac
     6061 aaaagaattt atactttcat tacttgcttt ccagccatta gcttttgctt gattaaattc
     6121 tctatcaaac caagctccac cataacctat acttgtattt tgccaagcaa cccctttttc
     6181 cattgcatat atatctgcat caagccagcc atcttgtgca taacctttta ataaacttgc
     6241 aaaatcaact ttgcctgtca tgatgtcatc taaggaagtt aatgatccat caaagctttc
     6301 tttggccata gcttcagcat aagacttagc tataggattt aatgttgcac taccttctct
     6361 tggcgataca cccgttgatt ttaaaaaact cataaacaaa gcctctttag agtaacttcc
     6421 atcttcattt tgtggataaa ctgacatatc aggattaaaa gtatctattg cagtgtcttt
     6481 atctaaattt tgagtttgca tactttgcgg agtgaaattt aatggttgta agcctatatt
     6541 aatatgccca aacattccta attgttctgc ttcattatat tgctcttgtg tattataata
     6601 gtttgttatt gttagcttat cataattttt cggcataata cctatagttt tatcagatga
     6661 taattcacta at
//
LOCUS       DARATF010000083         6645 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.083, whole genome shotgun sequence.
ACCESSION   DARATF010000083 DARATF010000000
VERSION     DARATF010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6645
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.083"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..548)
                     /locus_tag="SB502_001433"
     CDS             complement(<1..548)
                     /locus_tag="SB502_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEG0434866.1"
                     /translation="MIEKEEIGIAIENYDECISGSKTFVFNTKGGTIGSGDDCTFRIQ
                     DKLEQIKNTHAIVSYEEGSFTIAAFEDSDIYYNKSFSRMPSGYEIIISIGDIFKIGNL
                     EFRFVDAKSIEASIKENKKYLEDIEKRNHFDEIEIKPRGKTSINFDKNKELKEILENN
                     DYKFIEEEKADDSFLKEIIQKNP"
     gene            679..1325
                     /locus_tag="SB502_001434"
                     /pseudo
     CDS             679..1325
                     /locus_tag="SB502_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779653.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
     gene            1476..2876
                     /locus_tag="SB502_001435"
                     /pseudo
     CDS             1476..2876
                     /locus_tag="SB502_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049860.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3030..3161
                     /locus_tag="SB502_001436"
                     /pseudo
     CDS             3030..3161
                     /locus_tag="SB502_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004087681.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VgrG protein"
     gene            3488..4108
                     /locus_tag="SB502_001437"
     CDS             3488..4108
                     /locus_tag="SB502_001437"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434867.1"
                     /translation="MGALYTEFITLGHMQNIIGFKNVNVGAEYLENTLLSKDTNVGLS
                     NTLNVGISNEVNIGQNHEEKIGNDKRVIINNNLEQDIKNDFIQRIGHNKNETIKGSYV
                     LQTNQSIKFYSKQDLSIETNEYFKAEADDSISFKAKKNCSFTADNVNTMANQESVLTA
                     QKQIVSRVGNTTITQTKDKIILQVGTTQVIIDSKGLRVKGGDLRAD"
     gene            4174..5107
                     /locus_tag="SB502_001438"
                     /pseudo
     CDS             4174..5107
                     /locus_tag="SB502_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818297.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
     gene            5285..5617
                     /locus_tag="SB502_001439"
     CDS             5285..5617
                     /locus_tag="SB502_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434868.1"
                     /translation="MLSYEYKNLVENGNLKVDAKYKVTLPPNLIAVLEYDKSEFNGVN
                     LRNFINDLEFELEHIEMELYDDPADFEGGDYYNEDSDCDEDYTVEDWVEDQVSDIKDF
                     LYALKDFK"
     gene            5614..>6645
                     /locus_tag="SB502_001440"
     CDS             5614..>6645
                     /locus_tag="SB502_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434869.1"
                     /translation="MKQTLSSNRVSFYLFSTKTFSDEKYLNAWSLKGERLNAKDWFEF
                     KQANKDKFYNKHLENTLKAMQEFKAYFSVDQFEGINLHGDDEWLDFLPSNYTQFYNRL
                     CKDKSKYILHRYYQKNDLTEIGMLKNLSPNFPFWDEKGENFSQNQIDIFIEKDNLAPY
                     FNKYDIYFNSSLELSFNFSDESLEYLINNYNHRINHTFTPKSQDEIQKELNLSKEDKI
                     ILELENMFLNLCKGISADYAFMDFSYFFVGYDHTLDSKNNTLKSYPINQDKLIHKRSF
                     KEYIEEYTNTYFLNYYSKEFLNELDNQELNKDRLNYYLINYNKIPKNTEEENIQGILS
                     KQKDIDINFV"
BASE COUNT         2640 a          862 c          884 g         2259 t
ORIGIN      
        1 ggattttttt gaattatttc ttttaaaaag ctatcatctg ccttttcttc ttcgataaat
       61 ttataatcat tattttctaa aatctctttt aactctttgt ttttgtcaaa atttatactt
      121 gtttttcctc taggtttaat ttcaatttca tcaaaatgat tgcgtttttc aatatcttct
      181 aagtattttt tattttcttt aatgcttgct tcaatgcttt ttgcatccac aaatctaaat
      241 tctaaattac cgattttaaa aatatcgcct atgctgatta ttatttcata gccacttggc
      301 attctagaaa aggacttatt ataataaatg tcagaatctt caaaagccgc aattgtaaaa
      361 gatccttctt cataagatac tatggcatgg gtatttttga tttgttctag tttatcttga
      421 atacgaaaag tgcaatcatc accgcttcct atagttccac cctttgtgtt aaatacaaat
      481 gttttagaac cactaataca ttcgtcataa ttctcaatag caattcctat ctcttctttt
      541 tctatcattg tttatttacc cctgtaatat tttctactat tttaagatta tttaaaatat
      601 aaactatatt atttaattca ctagcaccgt taataatttc aaagtcaaaa tataagtttt
      661 tattattgtt aaatataatc tctattcttt gatttcttta atcattattt gctttggata
      721 ttttttgatg taataagctt aaaaaattat ccacgatctt ttaatgaaaa ttttaaagat
      781 tctatttcaa aaattttatt tagcatgttg ggaattaaag aatacgatat tgcaaaaaaa
      841 tatttaccat ttgcaccttt actactaagt ttaagacgac ctaaaacaca cattgaaaga
      901 gttttacaag tcaattttaa acttaaggat aaattatcaa ttattgaaaa tttaccccat
      961 caaattttaa tttcaaattc gcaaaaaaat aacttaggaa taaagaacaa tattttagga
     1021 aataatttta tattgggcga taaatttatc tcttatcaaa acaaaatagc gatctatata
     1081 aaggatattt catatcaaga agcggttaaa tttatgccaa tggaaccaaa cacgatgatt
     1141 taaaaaatag cataatgttt ttaacaaata atgaattttg tgttgattta tatcttaaaa
     1201 tcaactattc ttcagaaatg aagtttgtgt taggagaaga aaatactgcc aaacttggtt
     1261 gggcaaaaat tttaggtaat acgcaaaaaa aatatacaat agtatatatg aaactatgtg
     1321 aataagctga cacaaaaata tgtttaaaaa aatcacaacc tctcttcacc cataaaccat
     1381 accctaaaat aaactttatt ttacccactt tatgctaaaa taaatcacat aagcttatag
     1441 gctattaatc atcaacaaac ccaaaaggat catcaatgtc ccttaattct tacatgagtc
     1501 ttaatatatc aaattctact tcaaatcccc taccctttaa aatcactaaa gccctcatca
     1561 aagaaagtct tgaagagctt ttttctatag aatgtgaagg cttttttgaa agtttagaac
     1621 aagatttatt ttctttaaat actttaacca atgcttcatc tcatccaagc acccctacaa
     1681 cttttaattt tcatcctaat gttttaatcg atcaagaagc tattttaagt atccataatc
     1741 cttatgagaa taatacctta aactttgata acaatgaagt aaaaaactat aagggaatta
     1801 tcacttatat aaaatatcta ggtattaatc atgaaagtgc tttaaatatt aatgatagca
     1861 cttcaaatac taagcaaata caatacaagc attttttttc ttttaagctt caatcagtct
     1921 tgataagact ttctttaaat aaagccaatc gtatttatac tcatactaat attatagaag
     1981 tgattaaaca aacccttggt ttttatcaag atatcttaca taaagaaatt gattattcta
     2041 atatacattt taattatgaa gaacaagaac tcatctctca atacaatgaa agtgatttag
     2101 actttattac aagattaagc cataataatg gaatcttttt ttatgaagat gagaacacta
     2161 tttatttttg tgatgtgtat aaaaatgtaa aaaataaaga aattgagtat aatcctaatg
     2221 ttaataatat tttaaatcaa gcttgtattt cttctattta taaagagcaa agcttaagaa
     2281 ctaattcttt tacacattct agtattaatg ccaatactcc tttaaatctt ttatctttac
     2341 actctagtaa agttccttat gaacaagaac ttaataacaa agcttgttat aatgaacatt
     2401 tttatgagag tgaatattct tttacaaaaa gcattgattt aaagactaag ccttctctta
     2461 aagaaaaaag agccttagta ttaaatgaaa gcttactagc aaaaagtaat atttatcatc
     2521 ttaacttagg agattttatc actttaaatt ataaggagtt taatcatcaa gaagaaataa
     2581 aaaatcaaga tgaagaaaaa caagataaag cttctttgct taaagacttt attattatcg
     2641 ctaatactca aatcttaatt gatgatgcca tcttagctaa ttctattaat actaatgatc
     2701 atttaaattt aaataaatct tattctaata ctttaacttt actaaaaaag aatattatct
     2761 ttactccaag ttttaaagct aaacctaaag ctcctaatag cactcaaggt attgttatag
     2821 gagagagtaa ggatatagaa agtgagagga atactattta tactgatgag catggaaggg
     2881 ttaaggtaag gattaatctt tatgccaatc aagaagaatt agataatgat acttttattg
     2941 caaatgatat agatataaat tcttctaatt tatcaagcaa tacttataaa tcttatcatc
     3001 acactccttt tttaagagta gcttctcata tagcaagtaa tcattcaggt ttttttcata
     3061 ctccaagaat aggagatgaa gtgattattt cttttttaga tgatgatata gataaacctt
     3121 atgtaagtgg aagtttgtat aatggggcta caacaatgcc ccaatataat tatccaagat
     3181 ataaaagaga aatcgctaca aatgcattga gttatttaag cgtagttcct gctatgattg
     3241 ataaaggttt agatacatta aaacttcaag aaaatactga ttatgaatta agctctataa
     3301 acaatcatta tcttactttg gctaattcca cagtaggagt ggataacacc aatgcaagag
     3361 taaggaatga aattacccta aaaacgacaa agacaaagaa gaaatttata tcctagcaca
     3421 aaaagattat aaagaagaaa taggtaataa ttatgagcaa accataaaaa ataataaaac
     3481 ttcagaagtg ggagccttat ataccgaatt tattacttta ggacatatgc aaaatatcat
     3541 aggttttaaa aatgtcaatg taggagctga atatttagaa aataccctac tttctaaaga
     3601 tactaatgtg ggcttaagta atactttaaa tgtaggaatc agcaatgaag tcaatatcgg
     3661 acaaaaccac gaagaaaaga taggaaacga caaaagagta ataatcaata acaatctaga
     3721 gcaagatatc aaaaatgatt ttatccaaag aataggacat aacaaaaatg aaaccataaa
     3781 aggttcttat gtgcttcaaa ccaatcaaag tataaaattt tattccaaac aagatctaag
     3841 catagaaaca aatgagtatt tcaaagctga agctgatgat tctattagtt ttaaagccaa
     3901 gaaaaattgc tcttttacag ctgataatgt aaatactatg gcaaatcaag aaagtgtttt
     3961 aacagcacaa aaacaaatcg tttctagggt aggaaataca actattacac aaacaaaaga
     4021 taaaattata ctccaagtag gaacaacaca agtgattata gatagcaaag gtttaagagt
     4081 aaaaggaggt gatttaagag cggattaaaa gcaattttct taaaattaaa actaaaatca
     4141 taaaaaaccc aatttacaaa gaaaggaaaa acaatgaaaa ccttagaaga tatcaaagct
     4201 atgagctatc aagaaaaaga tgaattagaa gatttagttc ttgaaattat agataataat
     4261 gatttagtta agctaaaaga tattttaaag gattatcctg taaaaatatc ttgttatgag
     4321 cttaatatta aagatgagga tggagacttt cctttatttg atccttttaa tctaataata
     4381 agagctgcac atgcttgtga agaaaacaat aatgattttt ctattttaga ttatttattt
     4441 gatgagtatg gattaagttt aaaagatcct aaatataact ttgctgaaat atatcaaaga
     4501 agctaatgat aaatatatct tgatggaaga agtagaagat gatccttgta tttatcaaaa
     4561 cgctctaatc tatgattata tattaagtgc tgataatcca aattctcaaa tcattaagta
     4621 tctagtcaat cgtggggcta aatttgaagt gcatgatgaa gatacaaatt ggacccctat
     4681 gcatttttgg gctagacgca ataattatga attattagaa ctagctatta aaggaggagc
     4741 taatgtagat atgcaaactt ttagtaaatt aagaaaatgc aacaatgaaa cccttttatt
     4801 tgaagctgta agcgaacctg aaacctatag ggttacacag cttttaattg aacttggagc
     4861 taatgtgaat tttgctaccc caaccacccc tttagatgat gcaaaaggat ctagaaataa
     4921 aaagctttta aaagatgcag gagcaatgac ttcagaacaa atcagaaaga aatttaattt
     4981 accagcatat gattcttctc attgcgaaat tgacggaaaa actgatatgg atttattagg
     5041 taaatatcat gatgaatatt ccaaactttt aaacgatgct ataaaaaagg ctaaagaaag
     5101 tgaatgaggg aatagaaatt cactttgcta aaataaatta taaggaaaga taatgaaaaa
     5161 taaaaaatta ttggatgatg aatatataca agaagtgttt aaatactatc ttaaaaatga
     5221 taattattta aaagatgctt tatatggttt aaaaaaatac gaacgaagag cttttataag
     5281 tagcatttta agctatgaat ataaaaattt agtagaaaat ggcaatttaa aagttgatgc
     5341 aaaatataaa gttaccttgc cgcctaatct tattgctgtt ttagaatatg ataaaagtga
     5401 atttaatggc gtaaatcttc gaaattttat aaatgatttg gaatttgaat tagaacatat
     5461 agaaatggaa ctttatgacg atcctgctga ctttgaaggg ggagattatt ataatgaaga
     5521 tagcgattgt gatgaagatt atacagtaga agattgggta gaagatcaag taagtgatat
     5581 taaagacttt ttatatgctt taaaagattt taaatgaaac aaacattaag ctctaatcga
     5641 gtaagctttt atcttttttc tactaaaact tttagtgatg aaaaatatct taatgcttgg
     5701 agcttaaaag gcgagcgttt aaatgccaaa gattggtttg aatttaaaca agccaataaa
     5761 gacaaatttt ataataagca tttagaaaat accttaaaag ctatgcaaga gtttaaagct
     5821 tattttagtg ttgatcaatt tgaaggcata aatctacatg gtgatgatga atggcttgat
     5881 tttttgcctt caaattatac tcaattttat aatcgtttat gtaaggataa aagtaaatat
     5941 attttacatc gatattatca aaaaaatgat ttgacagaga ttggtatgct taaaaatctt
     6001 tctcctaatt ttcctttttg ggatgaaaaa ggagaaaatt tttctcaaaa tcaaattgat
     6061 atttttatag aaaaagataa tttagcaccc tactttaata aatatgatat ttattttaat
     6121 tcttcacttg agctaagctt taattttagt gatgaaagct tagaatattt aattaacaat
     6181 tataatcaca gaatcaatca tacttttact ccaaaaagtc aagatgagat acaaaaagaa
     6241 ttaaatttaa gcaaagaaga taaaatcatt ttagaacttg aaaatatgtt tttaaatctt
     6301 tgtaaaggca tcagtgctga ttatgctttt atggattttt cttatttttt tgtaggatat
     6361 gatcatactt tagattctaa aaataatact ttaaaatctt atcccattaa tcaagataaa
     6421 ttaattcata aaagaagttt taaagaatat atagaagaat acacaaatac ttacttttta
     6481 aattattatt ctaaagagtt tttaaatgaa cttgacaatc aagaattaaa caaagataga
     6541 cttaattatt atcttattaa ttacaacaaa attccaaaaa acacagaaga agaaaacata
     6601 caaggcatac tttctaaaca aaaagatata gatatcaatt ttgta
//
LOCUS       DARATF010000084         6528 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.084, whole genome shotgun sequence.
ACCESSION   DARATF010000084 DARATF010000000
VERSION     DARATF010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6528
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.084"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..161
                     /locus_tag="SB502_001441"
     CDS             <1..161
                     /locus_tag="SB502_001441"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="GluRS2; in Helicobacter this enzyme was found to
                     misacylate tRNA-Gln with glutamate which is further
                     transamidated to glutamine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEG0434870.1"
                     /translation="EDFKNELLNKSNLKGKKFFMPLRIILTGNIHGPELSDLYPYIKN
                     FIHELARI"
     gene            164..445
                     /locus_tag="SB502_001442"
     CDS             164..445
                     /locus_tag="SB502_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEG0434871.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            442..2067
                     /locus_tag="SB502_001443"
     CDS             442..2067
                     /locus_tag="SB502_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEG0434872.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYTANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLVQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRYSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLSKS"
     gene            complement(1964..2449)
                     /locus_tag="SB502_001444"
     CDS             complement(1964..2449)
                     /locus_tag="SB502_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434873.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKASLPSVKEEIRLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            2545..3036
                     /gene="mobB"
                     /locus_tag="SB502_001445"
     CDS             2545..3036
                     /gene="mobB"
                     /locus_tag="SB502_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEG0434874.1"
                     /translation="MKQLIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLSPDFDICLVEGLKT
                     LDLPRISVFCKEIDESYFIFSNAIASYEKISHPYLTWLDLNDIQAICQYILKNAKNLQ
                     GEL"
     gene            3038..3880
                     /locus_tag="SB502_001446"
     CDS             3038..3880
                     /locus_tag="SB502_001446"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEG0434875.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLS
                     DEIITKTLSQCSSIKAIISEEKDENLTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLKMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNRSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            3873..4070
                     /locus_tag="SB502_001447"
     CDS             3873..4070
                     /locus_tag="SB502_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434876.1"
                     /translation="MNEVRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            4080..5966
                     /gene="metG"
                     /locus_tag="SB502_001448"
     CDS             4080..5966
                     /gene="metG"
                     /locus_tag="SB502_001448"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEG0434877.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYVSSLDFQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDIYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNISKEGVLKFHNVELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSCQKVALALNFEISSTNYAKMILDNKLLDFKANPCEALFPKVEKALLK
                     QEIKEEPKKEESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQVL
                     SGIAKYYKASDLIGKQVCIISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLVQNG
                     SLVG"
     gene            5970..>6528
                     /locus_tag="SB502_001449"
     CDS             5970..>6528
                     /locus_tag="SB502_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434878.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKAGFAFFNNDK
                     KEITQAVKKGAYAIITENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLP"
BASE COUNT         2436 a          943 c          982 g         2167 t
ORIGIN      
        1 atgaagattt taaaaatgaa cttttaaaca aaagcaactt aaaaggtaaa aaatttttca
       61 tgcctttaag gataatttta acaggaaata tccacggacc tgagcttagc gatctttatc
      121 cttatattaa aaattttatt cacgaattag caaggattta actatggtta tagactcttt
      181 tattatttct atttttcaag tactacaaat tgtcattaac atttatactt ggattattat
      241 catcacagca cttctaagct gggtaaaccc tgatccttat aatcctatag tgcaaatttt
      301 atataaacta agctaccctg cttacgcctt agttagaaaa attccaacac gcattggtaa
      361 tattgatctt gcgcctttga ttatagtctt agcattgcag tttcttggca tttttcttgg
      421 gaatatctta aggagtatat tgtgataaaa aaaatactcg tttttttatt tattttttca
      481 agtttaaatg ctacacaata tagtatagaa aaactcaaaa aggaagaaaa ttcacttgct
      541 aaggattatt atatttatag gcttttagaa aaaaataaaa tcagtaaaaa agatgcacag
      601 gatttaaatt ctcatatttt tcgctatata ggaaaaatta aatctgaact tgaaaaaatc
      661 atccctttaa agccttatat caacccaaaa tatgctaaat gctataccta tacagcaaat
      721 actatcttag atgcaaattt aacttgtcaa agtgtgcgct taaattcatt agtttttata
      781 gcgagtctaa attccaaaga ccgaactact ttagttcaaa cctttaaaaa tcaaagacct
      841 gatttgacaa atttattgct agcttttaat acttctgatc ctatgagcta tatagtacaa
      901 aaagaagata ttaatggttt ttttaaactt tataattatt ctaaaaaata cgacttagat
      961 ttaaatacaa gtttagtcaa taaactacca aaccacattg gttttaaaga ttttgcacaa
     1021 aatattatta ttaaaaaaga aaatccaaaa tttagatatt ctatgctaga aataaatcct
     1081 gaaaatgtaa gtgaagattc tgctttctat ttaggagtca atgccttaac ttatgataaa
     1141 acagagcttg cttatgactt ttttaaaaag gcggcacaaa gttttaaatc gcaaagtaat
     1201 aaagacaatg ctatattttg gatgtggttg attaaaaaca atgaagaaga tttaaaaact
     1261 ttatcgcaaa gttcttcttt aaatatttat agtctttacg caaaagaact taccaacaca
     1321 ccttttccaa agatagaaag ccttaatcca agcaagaaaa aaaataattt taatatgcaa
     1381 gatccttttg cttggcaaaa aataaacaaa caaattcgcg atgctaacgc aagtcaacta
     1441 gatgtcttgg caaaagaatt tgacacacaa gaaaccttgc ctatttatgc ttacatatta
     1501 gaacgcaaaa ataattttaa aaaacattat tttataatgc cttattatga caatataaaa
     1561 gactataaca aaacaagaca agctttaatt ttggctattg ccagacaaga aagtcgtttt
     1621 attccaactg ctatttcagt ttcttatgct ttaggcatga tgcaatttat gccatttttg
     1681 gccaatcaca taggggaaaa agaattaaaa attccaaatt tcgatcaaga ttttatgttt
     1741 aaacctgaaa tagcatatta ctttggaaac tatcatctaa attaccttga atcacgttta
     1801 aaatctccac tttttgtcgc ttatgcttat aatggcggta taggatttac taaccgtatg
     1861 cttgcaagaa atgatatgtt taagacaggc aaatttgaac ctttcttgtc tatggaacta
     1921 gttccttatc aagaaagccg aatttacgga aaaaaagttc tagctaatta tattgtgtat
     1981 cgacatcttc tgaacgatag tataaagatt tcggatattt ttgaaaattt aattcaaaac
     2041 aaggcaaatg atctaagcaa atcttagcta caagcctaat ctcttccttg acactaggaa
     2101 gagatgcttt aaaataatca gtatagttgt tttgtattat atattttaaa tactcatcat
     2161 ccaatttttc aatattggct tttttattat tgataaaaac ttctaaattt tgaattttta
     2221 atgtatttgg agtaaaagat aaagctaata catcatcttt acttgtcttg tctagaattg
     2281 ggtttaaata agacatagtt ataatggcat taatcttatc ttgtgtgatt ttgtattttt
     2341 gagtaaacat taaagtttga gattttaaat ttgtatccac aatcgcctga tcttttaaag
     2401 aacaagctcc aagcaaaaaa gcacctaaaa ttacactata aattttcatt ctttttccat
     2461 attttttagt attattgtag ccttttaacc ctattttttg gtttaaaaag atataatttt
     2521 gcaaaaaaat taagagtata ttttatgaaa caacttatta tagcttttag cgggccttca
     2581 aattcaggaa aaactacact cataaccaaa atagctgata attttttgca acaaaattta
     2641 aaagttttaa tcattaaaca tgatcctgcc gataaagctc aatttgattt taacggtaaa
     2701 gatagtttta aattttttca aagtggagct gaagtcatgg ttttaagccc tacaagaaca
     2761 actttttttt ctcatgaaaa tagagatatt ttaaaagctt taaaattaag ccctgatttt
     2821 gacatttgtt tggttgaagg attaaaaact cttgatttac cacgcattag cgtattttgc
     2881 aaagaaattg atgaaagtta ttttattttt tcaaacgcca ttgcaagcta tgaaaaaatt
     2941 tctcaccctt atcttacttg gcttgattta aacgatatac aagctatttg ccaatacata
     3001 cttaaaaatg ctaaaaattt acaaggagaa ttataaaatg caagaagtga tttcttatat
     3061 acaaaaagcg gttttagaaa tttctaacgc tttaaaattt cccgatacaa gctacagtca
     3121 aaatcaaaat tttacaggcg atacccaact caaatttgat gttttaagcg atgaaatcat
     3181 cacaaaaact ctaagtcaat gttcaagtat taaagccatc ataagtgaag aaaaagacga
     3241 aaatttaacg cttaacgaga gggcaaattt tatcgtagct tatgatcctt tagacggttc
     3301 tagcttaatg gatgttaatt ttgccatagg ttctattttt gctatctatg aagaaaaagc
     3361 aagtgctaaa aatttaagag ctgcgcttta tagtatgtat ggagcgcgat tagaacttgt
     3421 gatttgcaaa gatcagccaa aactttatcg cttaaatgca aataatgaat ttatttttat
     3481 aaaagatctt aaaatgaatg aaaaaggcaa gattaatgct acaggcggaa cgcaaaaatt
     3541 ttgggaagaa aaacacgcta aatttatcaa aagtcttttt gatgaaggct atcgcttaag
     3601 atattctgga gccatggtaa gcgatatcaa tcaaatttta ttaaaagggg gtggcatttt
     3661 tagctatcct gcaacacaag atgcgcctaa tggcaaactt cgtgcctttt ttgaagtctt
     3721 tcctctagcc tttatcatag aaaaagcagg cggaaaaact acaaatggaa aaaaccgctc
     3781 tttgcttgaa cttgaatttg ataaaatcca tgcgacaact ccttgttttt ttggctcaga
     3841 atatgaaatt tcaaaacttt taaaggctta caatgaatga agttagagat gaatttgagc
     3901 aagatatgga taaaaaaaaa gaaattttac tttcatgtca aaactcaaaa aacctaaact
     3961 cttgttataa ttgcgatgaa atttttaact gccaaactag aaaaaattat gttgatgcag
     4021 tctataacag tatgtctaag ggtaaaaccg aaggcggatt tgacttttaa aggaaaaaaa
     4081 tgcgttatat tacaacacca atttattatg taaatgatgt gcctcattta ggtcatgctt
     4141 atactaccat catagccgat actttagcaa gattttatcg tttgcaagga catgaaacaa
     4201 gatttctaac aggaacagat gagcatggac aaaaaatcga agaagctgcc aaactaagaa
     4261 attccactcc tcaagaatac gctgataaaa tcagttttga atttaaaaaa ttatgggatg
     4321 aatttgaaat cacctatgat atttacgcaa gaacaactga tacaaggcat attgaatttg
     4381 ttaaagctat gtttttaaaa atgtggcaaa aaggtgatat ttataaagat gaatacgaag
     4441 gacactattg tatttcttgt gaaagctttt ttactcaaag tcagcttatt aacgattgtt
     4501 cttgcccaga ttgtggcaaa caaactagaa ttttaaaaga agaaagctat tttttcaaac
     4561 tttcaaaata tcaagataaa attttacaat ggtatgaaga aaaagatccc atcttgccaa
     4621 aaaacaaaaa aaacgaactt ataaattttg tccaaaacgg ccttaaagat ctttccatta
     4681 caagaacaag ttttgattgg gggattaaac tgcctcaaga aattaatgat gataaacata
     4741 ttatttatgt atggcttgat gcacttttta tctatgtaag ctcacttgac tttcaaaaca
     4801 agggggaaaa tgctaaattt tggcctgcgc atgtgcattt agtaggaaaa gatatcttgc
     4861 gttttcatgc catttattgg ccagcttttt taatgagcgt ggatttgcct ttgccaaaat
     4921 ttataggtgc acatggctgg tggactaaag aaggtgaaaa aatgagcaaa tctaaaggca
     4981 atgttgtaaa acctaaagaa gtggttgata tctatggaag cgaagctttt agatattttt
     5041 tacttagaga agtgcctttt ggtaacgatg gggattttag cgaaaatatg ctgataaatc
     5101 gtatcaatgc agagcttagc aatgaatttg gaaatttact taatcgcatt ataggtatga
     5161 gtacaaaata ttctcaagga aatatttcaa aagaaggtgt tttaaaattt cacaatgttg
     5221 aattaaatca agcaaaagaa cacttaaatt tagcggtaga atttttagaa aacttacagt
     5281 gtaatcgtta tttagaagaa ctttttaaag ccttaagtgt agcaaattta gctattagta
     5341 aatacgaacc ttggaattta atcaaagaaa acaaacacga acaagctaac gctttagttg
     5401 cactttgtgc aaatatttta gccaaaacaa gccttttatt aagccctact ctaccaaagt
     5461 cttgtcaaaa ggtggcctta gctttaaatt ttgaaatttc atctacaaat tatgcaaaaa
     5521 tgatacttga taataaactt ttagatttta aagcaaatcc ttgcgaagct ttatttccaa
     5581 aagtagaaaa agctctttta aaacaagaaa ttaaagaaga acctaaaaaa gaagaaagtc
     5641 ctaaaataaa aatcgatgat tttgcaaaaa ttgaaatcaa agtcgctaaa gtgcttgatt
     5701 gtcaaaatat agaagggagt gaaaaacttt tgaaatttca actcgaactt gacgataaag
     5761 aaatccgtca agtactctca ggcatagcaa aatactataa agccagtgat ttaatcggta
     5821 aacaagtttg cattataagc aatcttaaaa aagctaaaat ttttggacat gaaagcgatg
     5881 gtatgatact ttctgcaaaa agcggagata aacttgtttt aatcacccct gaacaacttg
     5941 tacaaaacgg ttctttagtg ggttaaaata tgcaaattag caatttaggc gaacttttaa
     6001 acgcgacact cattcatgaa ggtagcgttt taagcgtgga aggttttgcc ataaatttaa
     6061 atgaacttaa agcaggcttt gccttcttta ataacgataa aaaagaaatt acccaagctg
     6121 taaaaaaagg cgcttatgct ataattacag aaaatgacat tactattgaa gataaagaca
     6181 ttttttactt tagagtagaa aatctagaac aagctcttgt aagattttta cgcttttttt
     6241 gcgaagataa agaatgtgaa tttttgcttt ttaaatctta cgaactaagt ctttgtaagg
     6301 ctttttattt taacatttta aaaggaaata tttttgctga ttttgaaaaa ctaatcaaag
     6361 caaaaaaggg tgaaattttt tgctactgtg aagaaaatta cttaaataaa ctttgtgcct
     6421 attctcatag tctaaaagat gctaatttta ccttattatc gcgatctagc ttctttttta
     6481 caactttgat ttgtgaaaat ttatatttta aaaatcttaa tttgcctt
//
LOCUS       DARATF010000085         6504 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.085, whole genome shotgun sequence.
ACCESSION   DARATF010000085 DARATF010000000
VERSION     DARATF010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6504
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.085"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..616)
                     /locus_tag="SB502_001450"
     CDS             complement(<1..616)
                     /locus_tag="SB502_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEG0434879.1"
                     /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANN
                     HISGRSLDSPLTVFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVG
                     ILCINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSV
                     DSSYLNSDYQLSITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKIS"
     gene            784..1146
                     /locus_tag="SB502_001451"
     CDS             784..1146
                     /locus_tag="SB502_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEG0434880.1"
                     /translation="MSNYPKAIGPYSAYREVNGLLFISGQLPINPDSGEIESHDIKEQ
                     TKQSLKNIGAILEENGISYDKVVKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
     gene            1150..2590
                     /gene="dcuC"
                     /locus_tag="SB502_001452"
                     /pseudo
     CDS             1150..2590
                     /gene="dcuC"
                     /locus_tag="SB502_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            2603..3767
                     /locus_tag="SB502_001453"
                     /pseudo
     CDS             2603..3767
                     /locus_tag="SB502_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            3777..5144
                     /locus_tag="SB502_001454"
     CDS             3777..5144
                     /locus_tag="SB502_001454"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0434881.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLDVPNISWQSARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDATTYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            5153..6493
                     /locus_tag="SB502_001455"
     CDS             5153..6493
                     /locus_tag="SB502_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEG0434882.1"
                     /translation="MFYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTEKNTPIWVNDQKLDPIYAAMLDSIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVSKDAKKIIKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASRVNEFLSNGSNSKVLHIANAIKNGIMVAHF
                     AKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELSKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLESYENLKREEVLEFAKKISYKKRKSQGFPKYFPGHLEASLQDGRIIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNTKANKILDQIINLENLNHFSF"
BASE COUNT         2256 a         1009 c         1094 g         2145 t
ORIGIN      
        1 ctgaaatttt taaaaatttt gctacgatag gaaccgcccc ttttatatta aaaatacctt
       61 tttcatatag cttttcagca atttcttctt tttgagtaat acttaattga taatcagaat
      121 ttaaataact agaatctacg ctttgaacta aaatatcctc tatcgagtga cttaatgttt
      181 ctatacttga atcattttga gaaaaactaa tatttcctaa aatatcaccc atatctccaa
      241 ttttttctaa atcaatcatc ttgcatatta aatctctcat aatgctagta tcatgattga
      301 tacacaaaat acctactaat ttgtcatgat ttttaataaa aaaagtagat cctctaatta
      361 attttgattt tccaacaaga gccttataat cacataaaaa atctttttct aaatattttt
      421 tattttgcat aagctcactt gcaaaaacag tcaagggaga atctaaactt ctcccactaa
      481 tgtgattgtt agcaattgct gcaatatagg ccccatcttc agtaattaca tggaaaacta
      541 tctcatattg ctcacctaaa acttctccta aaaaatatgt caactttata aattgttgtt
      601 tttgtccctc atccataaaa ctgccttcaa taaaaaatta atataatatt aaattctact
      661 ctttatactt taaaacattt cttaaaaata aaattttatt attatgataa taaactattg
      721 acaaattatt attgtagtga taaaatgcat tctgcttaat ctatatttaa caaaggagaa
      781 ttcatgtcaa actatccaaa ggccattggt ccatactcag cttacagaga agtaaatgga
      841 cttttattta tatcaggaca acttcctatc aaccctgatt caggcgaaat agaaagccat
      901 gatatcaaag aacaaaccaa acaatctttg aaaaatatcg gtgctatctt agaagaaaat
      961 ggtatcagtt atgataaagt ggttaaaacc acttgctttt tagctgatat taatgatttt
     1021 gtagcattta atgaaattta tgctgaattt tttaaagctc cttatccagc aagaagtgct
     1081 tttgcagtaa aagatctacc aaaaaaagct aaagtagaga tagagatcat cgctcaaaaa
     1141 ggataaaata tgctaggtat tgttttttct ttatttagtg tttttttact tgtttttatg
     1201 ctttataaaa aaatcaatgc tcacatggca ctgcttttaa gtggtttgct tttactttcc
     1261 ttagctgcta tttttggact ttctccacac attgttacca aagattcttt aaatctaggt
     1321 ttttttgata tttttcaagt ttttaatcaa accatgtcaa gtacattagc agagcttgga
     1381 cttacactta tgactatagc aggtttttct gcttatatgg atcatgtagg ggcttcttat
     1441 gcacttttta aagtttttga aaaaccttta aaagccgtaa aatctcctta tgttttactc
     1501 atagttgctt attttatcgt gcaattttta gttcttttca tcccttctca cgcaggcttg
     1561 gcacttttac ttatggttac tatgtatcct atacttgtac gctctggtgt ttcaaaactt
     1621 tctgccttaa gtgtgattgc tatttgtcaa tatatcgatc atggacctgg aagtggaaat
     1681 gtgatcatgg cctcagaaaa agctgaagtt gatcctgcaa tttattttgt tcattatcaa
     1741 ctccctacaa ccttgcctat cattatagct gtaagtattg caatatatct ttgcaataaa
     1801 ttttttgaca aaaaagataa ttttgtcttc aatgcgcaag aaattgaaaa aagaactaaa
     1861 tgaaaatgaa ggtaaagaaa aagaacttaa aaagcctcct agaatttatg cgattttacc
     1921 tataattcct ttggttttaa tcctaggatt tagttccgtg cttgatagca tcttggtttt
     1981 aatgggaata agtagcgctg aagaagttaa agcagctgct agcactgcaa ttaaaatgaa
     2041 tgttccagta gcaatggtga tttcaacttt tgtggctatt atttttgaaa tgatacgcta
     2101 taaaagtata gtagaaactc ttaattctat gatgattttc tttaaaggaa tgggacattt
     2161 atttgttatc acagtttcac tcatcgtttg tggtcaagta tttgcaagtg gtcttttatc
     2221 tgtaggtttt gtagatactt taatagaatt ttgcaaaaat gcaggatttg gagttttggc
     2281 tattattatc gctgtttcaa tcttacttgc ggtttgtgct ttcttaatgg gttcaggaaa
     2341 tgcggcattt tttagctttg ccccacttat cccaaatata gcaaaacact ttggagttga
     2401 aactatcact atgatagcac cgattcaaat catgacgggc tttggaagat gtgttagtcc
     2461 tattgcacta gcgatcttag ctatctcagc tattgcaaga gtaagtcctt ttgccgtggt
     2521 taaaagaaca gctattccta tgcttgtagc ggctattgta aatgttatta tgacttatat
     2581 ctatctttaa aaaggagaaa aaatgaactc aaaaactaaa cttattcatt gtggcagagg
     2641 cgatcaaggc gctgaagtaa gatcagtcaa tcctacactt atgcgtgcat caaccatact
     2701 ttttaaagat cacgcaactt ggcaaaaata cagaggatta agaaaaacag atcgtgtttt
     2761 aagttatgga gctagaggaa caacaaccaa ttttgaactt gaaaaactta tttgcactct
     2821 agagggtggt tatagagcac aacttttccc aacaggactt gcagcattag ctatggtgct
     2881 tttaaactat gcaagcaaag atacacattt tttaatcact gatgcaattt atgggcctgt
     2941 aagaacgatt tgcgaattat ttttagaaaa aatgggcatt gaaattgatt ttttaaaagc
     3001 tgatgcaagt gatgtagaag aaaaaaatca aacctaatac caagcttatc ctatgtgaaa
     3061 gtccaggttc tatactttat gaaatcatag atttaccaaa actttgcaaa attgcccatg
     3121 cgcataatat ccctgtagct attgacaata cttattctag tggatatttt ctaaatcctt
     3181 tagaacttgg agtggatatt tcagttatcg ccgctacaaa atatcttagc ggacactctg
     3241 atgtaaccat gggtatagta gtaatcaacg aaaaagaatg gaaaaatttt gacaaacttc
     3301 cagaagcttt aggctttaca acaagtcctg atgatgctta cttagtactt cgtggtatga
     3361 gaacactaga tgtaagaatg aaagcccatg aaaaaagtgc tgatgaaatt gtagagtttt
     3421 tacaaagtag aaaagaaatt aaaacaattt tctatccaaa actcaaatcc cactcaaatc
     3481 atgaaatttt catgcgtgat cataaaggtg caaatggtat gattaccata gaatttgcag
     3541 aaggttataa caaagaggat gctattaaat ttgtagataa actagaatac ttttcaattg
     3601 gtgctagctg gggtggatat gaaagcttgg ccaccgtaac tactccacct agaactgcaa
     3661 cagacctaag tgcaagagga ccatttgtaa gatttcatat aggtcttgaa gatactaaag
     3721 atttaattgc tgatttaaca caagcttttg atagtattaa aaaataagga gataagatga
     3781 caggaattag cgtatttgat catagattac tagcagactc atggagcacg caggaaatgc
     3841 gtgctatttt ttgcgaacaa aaccgcatac aaaaatggct cgatgttgaa gcagctttag
     3901 caaaagcaca agcaaaactt aaaattatcc ctaaaaaagc agctgatgag atcgcaaaaa
     3961 aagctcatta taaatttatg gatatggact ttatctttgc tgaatttaaa aagaccaaac
     4021 accctttagt tcctactgta agaggattag aaaaagcttg cgataataat ttaggcgaat
     4081 atgtacattt tggagtaacc actcaagata tcatcgatac aggactggtt ttacaattta
     4141 aagaagcaat gactcttgta aaaagcgaat taaaagctat cgcaaaagcc ttagcgaaac
     4201 tagctaaaac ccataaaaac actgctatga tgggaagaac tttagcactt caggctttgc
     4261 ctattacttt tggacataaa gtggctattt ggttaagcga acttgagcgt cattttgaaa
     4321 gaatacttga acttgaaaaa agactttatg taggcagtat agtaggcgct gtaggaacta
     4381 aagcaagttt aagtgatgag tgcaatgaag tagaaaaact cactttagaa aatttaggac
     4441 ttgatgtgcc taatatttct tggcagagcg cacgtgatcg ctttatagaa cttggttttg
     4501 tactaggcaa tatcaacgca acttttaaca aaatcgctca tgaaatttta atcctttcac
     4561 ataatgaaat tgatgaagtt gctgaacctt ttggcaaagg acaagtagga tcaagcacta
     4621 tgccacacaa aagaaatcct gcagtaagcg aaaatgcagt tacagtaagc aatgccttta
     4681 aggcaaattt agccatttta agcgatattg aaagacatga acatgaaaga gatggtcaag
     4741 tttggaaaat ggaatggaag cttttacctg aaatgttttt aatgctttct gtggttttag
     4801 caaatatgaa attcgctctt agtgatttag aagtaaaaaa agacaaaatg cttaaaaatt
     4861 taaatactct taatggtttt gttttagcag agcgtgttat gtttgcatta agcgatcatt
     4921 atggaaaaca acatgcccat gaaattgttt atgaaaatgc tatgctaggt atagaaaaac
     4981 aaaaaacttt taaagaagtt ttacttgcag ataaaagagt atctaaggta ttgaaagaaa
     5041 aagaaattga tgctttactt gatgcaacaa cctatgtagg atatgcacca aaacttgtag
     5101 atgaattttt agcaaaaatc aaaaatagcg ctatcttaaa ataggaaaaa tcatgttcta
     5161 tagtgaaatt ttagcggatt ttattttcaa tcttaaatat gaaaatatcc ctaatacagt
     5221 tgttcaaagg gctaaagaac ttatgcttga tagccttgga acagctatag cagcaagcaa
     5281 agaagaatgt gttttaaatg cttttaaagc ttttgaaaat ttaagcacag aaaaaaatac
     5341 tcctatttgg gtaaatgatc aaaaattaga tcctatatac gcagccatgc tagatagcat
     5401 tgcttctcat gcgttagatt ttgacgatac gcatacagaa gcgattttgc atgcaagtgc
     5461 gattttaact ccactttgtt taagttatgg atttcatgtt agtaaagatg caaaaaaaat
     5521 catcaaagct tttataatag gctgggaaat tgcagctaga gtaggcattg caagtaaagg
     5581 cacttttcat aagcgcggtt ttcatactac tgctattgca ggaatttttg gaagcgtgag
     5641 tgcaagtgca atcttgctgg atcttaacaa agaacaaatc atcaatgctt taggacttgc
     5701 aggaagtttt gcaagtaggg ttaatgagtt tttatccaat ggatctaatt caaaagtttt
     5761 acatattgcc aatgctatta aaaacggcat tatggtagct cattttgcta aaaacaatat
     5821 gagtggacct ttgagtattt ttgaaggtag ggataatatc tttaaatgtt ttggtataga
     5881 agaagaatgc gataaaacag aacttagcaa agccttaggt gaaatttggc aaaccatgca
     5941 agtttcaatc aagccttatc caagttgtca ttttgctcat gggcttattg attgtgctat
     6001 tgctttaaaa aatgatggtt taaaagctga tgaaattaaa agtattcatt gctttgtaga
     6061 tgaagttcct atttctttta tctgcgatcc tttggaagca aaatacactc caaatagtgc
     6121 ttatgaagct aaattttcca tgcctttttt aatggctcta ggattctttg atggtaaaat
     6181 cactcttgaa tcttatgaaa atttaaagcg tgaagaagta ctagaatttg ctaaaaaaat
     6241 cagttacaaa aaaaggaaat ctcaaggctt tccaaaatat tttccagggc atttagaagc
     6301 cagtttgcaa gatggacgca taatccaaaa agatgttttt atcaataaag gtaattttga
     6361 taatccacta agttttgaag aattaaaagc taaattttta gccaatgcac aaatttacct
     6421 tgataatact aaagctaaca aaattctaga tcaaatcatc aatctagaaa atttaaacca
     6481 cttttctttt taaatattta tcct
//
LOCUS       DARATF010000086         6497 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.086, whole genome shotgun sequence.
ACCESSION   DARATF010000086 DARATF010000000
VERSION     DARATF010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6497
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.086"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..703
                     /locus_tag="SB502_001456"
     CDS             <1..703
                     /locus_tag="SB502_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEG0434883.1"
                     /translation="GKVMDFQSAKNEVAKDYALMQLKNVANAKFLDLKNGKDNFQKDQ
                     NISESDVYYPIDLLNKAKNGDVLRPAPYNNGYIIVKLNKVDPIRNKTFEEAREEVLPM
                     YLSEQARKNLEEKAKNSLVNFKGDDIGFVSRDSSRESVKVSDKILNDSEFAYFLMNVF
                     NTDQNSSYVVINDNKAILYKINKQKLDMNSDKFEQYKAMLEQNLQNLKANELKQELVD
                     ELKKIYPIKIYYKGN"
     gene            700..2088
                     /gene="ftsA"
                     /locus_tag="SB502_001457"
     CDS             700..2088
                     /gene="ftsA"
                     /locus_tag="SB502_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEG0434884.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDRVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDTESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2104..3216
                     /gene="ftsZ"
                     /locus_tag="SB502_001458"
     CDS             2104..3216
                     /gene="ftsZ"
                     /locus_tag="SB502_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEG0434885.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            3372..4184
                     /locus_tag="SB502_001459"
     CDS             3372..4184
                     /locus_tag="SB502_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HEG0434886.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDSSRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNAILFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            4213..5004
                     /gene="flgG"
                     /locus_tag="SB502_001460"
     CDS             4213..5004
                     /gene="flgG"
                     /locus_tag="SB502_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEG0434887.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5070..>6497)
                     /gene="glnA"
                     /locus_tag="SB502_001461"
     CDS             complement(5070..>6497)
                     /gene="glnA"
                     /locus_tag="SB502_001461"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEG0434888.1"
                     /translation="GKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAIN
                     EETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYKG
                     QMYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTEE
                     GEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHHE
                     VAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHVH
                     MSLWKNGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFEA
                     PCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNKT
                     IPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQH
                     LKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2279 a          908 c         1229 g         2081 t
ORIGIN      
        1 aggtaaagtg atggattttc agtctgctaa aaatgaagtt gctaaagatt acgccttaat
       61 gcaactaaag aatgtggcta atgctaaatt tttagattta aaaaatggga aagataattt
      121 tcaaaaagat caaaatatta gtgaatctga tgtttattat ccaattgatc ttttgaataa
      181 agctaaaaat ggagatgttt tacggccagc accttataat aacggatata tcatagttaa
      241 actaaataaa gtagatccta taagaaataa aacttttgaa gaagctagag aagaagtttt
      301 acctatgtat ttaagcgaac aagctagaaa aaatttagaa gaaaaagcta aaaatagttt
      361 agtaaatttt aaaggcgatg atataggctt tgtaagtcga gatagttctc gcgagagtgt
      421 aaaggttagc gataaaatat taaacgattc tgaatttgct tattttttaa tgaatgtatt
      481 taatactgat caaaatagtt cttatgtggt cattaatgac aataaagcaa tattatataa
      541 aataaataaa caaaaattag atatgaactc cgataaattt gaacaataca aagctatgct
      601 tgaacaaaat ttgcaaaatt taaaagcaaa tgagcttaag caagaacttg ttgatgaact
      661 taaaaagata tatccgataa aaatttatta taaagggaat tgattttgaa tatattagga
      721 attgacttag gctcaaccca gacttgtgcc attattgctc aaaaagatga agatggatta
      781 aaaattattg gtttttccaa gtcgaaaacc aacggggtta aaaaaggtgc cattaccaat
      841 atagagcttg cttctaaatc tattgaagag gctgttagaa gtgctgagat gatgagcgga
      901 gttcattatg atagggttgt ggtgtctata tcaggtgctt atactaaaag cgttgatagc
      961 ataggtgttg ttaatattcc aaatcatgaa ataggcatta aagaaattca tcgtgctgta
     1021 agtacagcta agcatactgc caatctacca agtggttatg aaattatcca tgttttgcct
     1081 tataatttta aggttaatga tcttgaacat gttgatgatc ctttgggaat gagtggtaat
     1141 cgtttagaag tttcaaccca tatagtgatt tcacaagaat ctcatattaa aaatcttaag
     1201 aaagcagttg aattagctga tttaagagtg gataatatag ttctttcagg atatgcttca
     1261 gctatagctt gtttagatga tagcgaaaag gaattaggtg ctgttttgat tgatatgggt
     1321 ggagcgattt gtgatatggt tgttcatact ggaaattcaa ttagatataa tgattgtttg
     1381 caaattggct cgattaatat cacccaagat ttatcaatgg cattgcatac acctttaaaa
     1441 gaagcagaaa aaatcaagct taattatgca gctctttcac aacagcctaa tacccttata
     1501 caaattcctt caatgggtga tgaaagaaaa gttaatgaag tttctttgga tattatttca
     1561 aacgtaattt atgcaagagc ggaagaaact ttgatgattt tggcaaaaat cttaagtgat
     1621 aatcgttatg ccaatgctat aggtggcgga gttgttttaa caggtggaat gactaagtta
     1681 gcaggtattg atgagctagc tcctgcaaca tttgataatc gctcagttag actggctact
     1741 gcaagaaaag atttgattac tggttttagt gaaattttta atgatcctga aaatacttgt
     1801 gctataggac tttgtttata tggagcggga tattttacgc cttatgaact tgattctaat
     1861 gaaaaattaa gatataaagg ggaaattgaa aattttaatc gtcaaattaa acaagatatt
     1921 gttttgcaaa aagatacaga aagtgaaata aaatctgatt tttttgatga aaatttgcaa
     1981 gaaaatgata caattgcaat acaagaacaa ttagatttta aagagccaaa agaaaaaaaa
     2041 cctagtgttt tttcaaatat ctggcataaa attatgaatc aattttaaca aggagaaatt
     2101 tttatgagtg aatttttagt agaagaaatg caacataata aaggtgcaaa aattaaggtt
     2161 ataggctgcg gtggcggtgg cggtaatatg attaaccata tggttaaaat gggattaaat
     2221 gatcttgatt taattgcagc gaatactgat gcacaagcta tttcaatttc attagcaaaa
     2281 actaaaattc aacttggcga gaaaaaaact aaaggtttgg gcgctggtat gcttcctgaa
     2341 gtaggtgcag aaagtgctag agaaagtttt gaagaaataa aagcaagtct tagtcaaagt
     2401 gatattgtat ttattgcttc aggttttggt ggaggtactg gaacgggtgc cactccagtt
     2461 attgcacaag cagctaaaga gattggagct ttaactgttt ctgttgtaac tatgcctttt
     2521 gcattcgaag gaaaacaaag aaaaaaactt gctgaaagcg gtctccttga gcttaaaaaa
     2581 gaaagtgatt ctattcttgt aattcaaaat gaaaaattat tgagcattat tgataaaaaa
     2641 gcaggcatta aagatgcttt taggttggtt gatgatattt tagctcgtgc tgtaaaaggt
     2701 atggtgtcta tcttacttga taatggagat attaatgttg actttgcgga tgtaagaacc
     2761 atcatgagtc atcgcggact cgcgcttatg ggtgttggta gtgctagcgg tgaaaatgct
     2821 atagaagagg ctctttcaaa cgctatagaa tctcctttgc ttgatggaat ggatattaaa
     2881 ggtgccaagg gagttatttt acattttaaa acaagttcta attgctcttt gtttgaaatt
     2941 tcggcagcag caaatagtat acaagaaatt gttgatgaaa atgctaagat tatttttggt
     3001 tctaccacag atgatagcat ggaagataga gttgaagtaa ctattattgc gacagggttt
     3061 gaagataaag atacagtagc taaaaaatct accgaagaag ctcaagcttc taagaaaaat
     3121 ccttatttaa gtcttaaaaa ggtaagcggt ggttacgatg aagagataat ggcgcaaatt
     3181 gaaacaccaa ctttcttgcg tcgtcaaatg gattaaaatt gatttttaaa gcaagattga
     3241 gtcaaatctt gctttttata gtttaaaatt ctctcctaat aatctttcaa atatttattt
     3301 ttctttgttt ttaaaagttg gaacactctt tgcttttata gttataaaat cttaaattta
     3361 taggtgaaaa tatgcaaaat ggatattatc aagcaactgg cggaatggta actcagttta
     3421 ataaacttga tgtgattact aataatcttg ccaatatcaa tacaagtgga tataaaagag
     3481 atgatgtggt tattgcagat tttaaaagga tttttaaaga aactcaggat gagttgccta
     3541 tagaaaatca cacaagagat tcatctcgtt ttgtaaatac tacaatagat ggcatcccgc
     3601 aagtttctca agaatatacg gattttagcc taggttcttt aaaggccaca aacaatcctt
     3661 tggatttggc aatgactaga gaagatgctt tttatttggt tcagaccaaa gatggagaag
     3721 taagattaac taaagatgga aattttcaac ttgatgatga gggttatttg gtaaataagc
     3781 aaggatacaa ggtattaagt agtgattatt ttaataatcc tcagaatgct ggcatacgca
     3841 ttcctaatgg tgctgttcaa attagcgttg ataaaaacgg aagcattgaa gttgatggag
     3901 ctcaaaatgc aatattattt gtagcacaag tagatgatat aagagctttg caaaaagatg
     3961 gggataatgt ctataaaata gatgatctaa cccgtattag agatttgaaa aactccaatg
     4021 ctattcgcca aggtttttct cagggatcaa atgttaatcc agttactgaa atggtaggac
     4081 tgattgaagc aaacagaatg gtagaaatgt atcaaaaagt tatgacagct catatggatg
     4141 acttaaatca agaagctatc aataagcttg cagctgttaa ataatttaaa ataaaataaa
     4201 aaaggattca agatgatgag atcacttcat actgctgcta caggaatggt agcgcagcaa
     4261 acacaaattg atgttacttc aaataacatc gccaatgtta atacagcagg ttttaagaaa
     4321 agtcgtgcag aatttgctga tcttatgtat caagttatga agtatgcagg aacttcaact
     4381 tcagctacta ctctttctcc ttcgggtata gaagtgggtg tgggtgttcg tccaacagcg
     4441 gtaactaaag tttttactga aggaaattta aaatcaacaa gtactgatgg tcttgatatg
     4501 gctattgcag gtaatgggtt ttttcaaata caacttcctg atggcactat aggatatact
     4561 agaaatgggc aatttacaaa agataatgaa ggtaatattg taaattcaga tggctataga
     4621 cttttacctg aaatgacaat acctgaaggc gcaacagcaa ttaatgttgc tacagatgga
     4681 accgtttctg taatgctacc aggggagcaa caagaaactc aaattggcca agtggagcta
     4741 gttcagttta taaatccagc gggtcttcat tctatgggtg ataatcttta tctcgaaaca
     4801 ggagcaagtg gtgcacctgt tgcgggtata gcaggacaag atgggcttgg aacaataaga
     4861 catggattta tagaacttag taatgttcag cttgttgaag aaatgacaga tcttatcaca
     4921 ggacaaagag cttatgaagc gggttctaag gccattacaa caagtgatga tatgctagga
     4981 attgtaaatc agcttaagcg atagttgata taaaataaat aatttttaat tcttttttgt
     5041 ttaatggcgt gttaaacgcc attaaatttt tagcaagagt agcaagtttt aaattcataa
     5101 gcagttggac gagcttctac tggccaaact tgtgtttcaa attttaaatg ctgatagtca
     5161 tcgataaaaa tatcgctcat tacaggtttt aaataagaat tatgtcggat taaagcttct
     5221 aaacttcctc ttagagtatg tggtaattgc tctatccctt tttcacgtat ttcatccaaa
     5281 gtaagatcaa ataaattttc atccatagga cccacaggaa tggttttatt tttgattcca
     5341 tcaagacctg ccattaaaag actaacaaaa gctaaataag gattagcagt gctatcaggg
     5401 aagcgaattt ctatacgagc tgaatttttg cctatgccat aaggaacgcg acaacttgct
     5461 gatctgtttt gacaagaata agttaaaata caaggagctt caaagccagg aactattctt
     5521 ttgtaagagt tggaacttgg atttgtaaaa gctgcaacac ttctagcatt ttttaaaatt
     5581 ccacctatat aatttatagc agtttgacta agtccactgt atccatcttt atcgtaaaat
     5641 aaatttactc catttttcca taagctcata tgaacatgca taccattgcc attatctccg
     5701 tataaaggtt ttggcataaa agtggcagtt ttgccattta aatgagctac catttttaca
     5761 acatatttat aaatttgaac attgtcagct gcttctacaa gcgtgccaaa atttactcct
     5821 atttcagctt gtccttgtgc aacttcatga tgatgaacaa aagttttaag acctactttt
     5881 tcaagggttt gaaccatttc agaacgaata tctactaaag aatcaattgg ctgaactgga
     5941 aaatatccac ctttgtttct tggcctgtgt ccagtattgt agctatcggt aaattctcta
     6001 tcatcattcc actctccttc ttcggtatca acttcatact tagaacaatg agtagtatca
     6061 actattttta cactatcaaa aacaaagaat tcattttctg gtccaaagta agcagtatca
     6121 gctatgccac tatttttaag gtgttccatt gctttttttg ctatgcttct tggacatttt
     6181 tcatacattt gtcctttgta aatatcatac acatcacaaa atactatgat agtaggatca
     6241 gccgtaaaag gatctaaaaa agcactttga gcatcaggtt ttaaaatcat atctgatttt
     6301 tctataggtt gccatccatg aattgagctt ccatcaaatg gaatgccagt ttgaaatgtt
     6361 tcttcattga ttgcatgaag attataggta atatgatgcc aagttcctat catatctgta
     6421 aaacgaaaat caacaaaaag cacttcattt tgtttgcaaa atttgaaaaa atcatctata
     6481 ttattaacaa attttcc
//
LOCUS       DARATF010000087         6321 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.087, whole genome shotgun sequence.
ACCESSION   DARATF010000087 DARATF010000000
VERSION     DARATF010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6321
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.087"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            97..522
                     /gene="exbB"
                     /locus_tag="SB502_001462"
     CDS             97..522
                     /gene="exbB"
                     /locus_tag="SB502_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEG0434889.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            515..904
                     /gene="exbD"
                     /locus_tag="SB502_001463"
     CDS             515..904
                     /gene="exbD"
                     /locus_tag="SB502_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HEG0434890.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            901..1585
                     /locus_tag="SB502_001464"
                     /pseudo
     CDS             901..1585
                     /locus_tag="SB502_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
     gene            complement(1598..2467)
                     /locus_tag="SB502_001465"
     CDS             complement(1598..2467)
                     /locus_tag="SB502_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434891.1"
                     /translation="MKIDTSASLTHSLTNNVDKKELSVLKKEDQDKIPVQDLSSLNSD
                     GVKVVFENKQGELIALNLSDENYSSLQKNFGSYMNYVARNDGSIRLNGEANQFVSNWF
                     ESVKDNFGSLNSNLNNKQQSVKLNFNTSTLQQSMQNLGFKTSDEKISDDANIEEKLNF
                     FIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNI
                     KEKGDEDLLQKAQEKGLSALSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNK
                     IENQEAQIVDKRV"
     gene            complement(2471..2632)
                     /locus_tag="SB502_001466"
     CDS             complement(2471..2632)
                     /locus_tag="SB502_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434892.1"
                     /translation="MLKIILILSILSSFAFANSCANYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            2727..3710
                     /locus_tag="SB502_001467"
     CDS             2727..3710
                     /locus_tag="SB502_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HEG0434893.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELAAKFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEVIELGDLIGAYSLVDEK
                     ISEKDLELALKIALTYTKHEVGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(3796..4884)
                     /gene="aroC"
                     /locus_tag="SB502_001468"
     CDS             complement(3796..4884)
                     /gene="aroC"
                     /locus_tag="SB502_001468"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEG0434894.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLCEFGICVQSGVFGIGTFV
                     SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLVGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSYNNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLEFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(4884..5558)
                     /locus_tag="SB502_001469"
     CDS             complement(4884..5558)
                     /locus_tag="SB502_001469"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEG0434895.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(5545..5985)
                     /gene="rnhA"
                     /locus_tag="SB502_001470"
     CDS             complement(5545..5985)
                     /gene="rnhA"
                     /locus_tag="SB502_001470"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEG0434896.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(5972..>6321)
                     /locus_tag="SB502_001471"
     CDS             complement(5972..>6321)
                     /locus_tag="SB502_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434897.1"
                     /translation="FEKYHMFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKIS
                     KHDDTHQFVFKNSNFKMLKILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNT
                     CKIIYEVKNNETH"
BASE COUNT         2242 a         1119 c          784 g         2176 t
ORIGIN      
        1 atttcttaaa aattatgata attgatatta attataaatt tattttttat acagtataat
       61 cttttaaaat ttataagtat atttttggag aaaaatatgg aatttttaaa agattacatc
      121 gatttaatta tctttttaat tctaggaatt atggcattta tagctttttg gtgtgttgta
      181 gaaagaatgc tattttttag aaaaattaac tttaaaaatt atgagaatca agagcaattt
      241 gatgatgcga ttagtgaaaa tttaaccacc atatatatca tctattccaa tgccccttat
      301 ataggacttt taggcactgt aataggcatc atggttacat tttacgaaat gggcttggcg
      361 ggcaatatag atgtcaaatc tatagtcgtg ggactttctt tagctcttaa agctacagcc
      421 ttaggacttt tggttgctat tcctgcttta atggcttata atgccttact tagaaaagtt
      481 tctctcttaa gcaatgctta taaggcaaat aaaaatgctt aaactaccaa aaaatgaagg
      541 tttaaatata gtcccattta tagacattat gcttgttttg cttgctatag tgcttagtat
      601 ttcaaccttt attgcgcatg gaaaaattca aatctcactt ccttcaagtg aaaatgctac
      661 caatataagc aataatgaaa aaaaacttct tataaccata gacgaaaaaa atacttttta
      721 tttaaatgat aaattagctg atttaaatga agttcaaaat gctatttttt cacttgataa
      781 aaaaaccata gtagaactaa aaagcgataa aaatgctaaa tttgaaagct ttgtaaaaat
      841 tatagatttt ttaaaagcca aagaacatga aaattttcag attcttactg agaaaaacaa
      901 atgaaaactt tatttttaaa tcataaatac caagcttctt atataacttt tatagtcttt
      961 atacctttac tttttgtcat ttttcactca aatgactttt ttaaaatgga aattaaaaat
     1021 gaagattctt tttctttagc aataaaacaa tttacccaaa ctaatccaac aaatgagact
     1081 aaaccaacag aatccattat agaacctatc aaaccaaaac ctcagccaaa agttattaaa
     1141 aaaaactcct gaaaaaattc aaaaaaaggt aaaaaaaata cctccacgcc caataccaaa
     1201 taaaacccca ataacaccaa ctcaagaagt taaaactttt acaaaaacaa ctgatacaaa
     1261 tgtcaaacct aaaatcaccc aattaacaca aggaaaagat aatcaccctg tattaaaaga
     1321 aattcaaaaa gctatacaac aagcacaatt ttatccaagg caagcaaaaa aaatgcgtat
     1381 gcaaggaact gtaaaagtag aatttttatg gaaagaaaac aaaactttag cagatttaaa
     1441 aatcatagaa agctcaggat atgatttatt agataaaagt gctttagaaa gcataagaaa
     1501 agcttcttta aattttccac actataacgg agatttaaga attacactac ctattatata
     1561 tgattttaaa accctaagag gataaaatta taatttgcta cactctctta tctacaattt
     1621 gtgcttcttg attttcaatt ttattttgaa aatctttact taaattctga cttaattctt
     1681 gcaaagattt ttgcttcagt ttttcaaatt cttcaggatt gctagcctca agctttgcct
     1741 gctcatcagc acttaaagca cttaaacctt tttcttgagc tttttgaagc aaatcttcgt
     1801 ctcctttttc tttgatatta ttttccttat catctttttt attgattttt tgcggatcta
     1861 tggttttcat agcattagct ccaccacctg atgcttcttt aatgtcgctt aaaatttctc
     1921 tcatgctagg ttctttaaca tcactatcat caactttacc atctttattt acatctttat
     1981 caataaaaaa atttaatttt tcttctatat ttgcatcatc agatattttt tcatcgcttg
     2041 ttttaaagcc taaattttgc atactttgtt gaagggtact tgtattaaaa tttaatttta
     2101 cactttgttg tttattattt aaatttgaat ttaaagaacc aaaattatct tttacacttt
     2161 caaaccaatt tgaaacaaat tgatttgctt cgccattaag ccttatacta ccatcatttc
     2221 tagcaacata attcatataa gaaccgaaat ttttttgtaa actactataa ttttcatcgc
     2281 ttaaatttaa agctataagt tcaccttgct tattttcaaa aacaacctta acaccatcgc
     2341 tatttaaact cgaaagatct tgcacgggaa ttttatcttg atcttctttt tttaatacgc
     2401 taagctcttt tttatcaaca ttattagtta aagaatgggt taaactagca gaagtatcga
     2461 ttttcattat ttatcctttt ttacattttg caaataaacc taaacgacac atttttctct
     2521 catgtgaatt ttttaaagaa ttacactttt taagttcttg ctcgtagtta gcacaagaat
     2581 ttgcaaaagc aaaagaactc aaaatgctta aaatcaaaat tatttttaac actttccaat
     2641 ccttatttta aagatttttt agttaaaatt atacctttta taatcgacaa aatcttaaaa
     2701 aactttataa tctcagaaag gaatcaatga aagcattagc tctttttagc ggtgggcttg
     2761 atagtatgct tgcaatgaaa ctcatcactg cacaaggcat agaagttaaa gctctaaata
     2821 tcaacatagg ttttggaagc acaagtgata aaagcgaaat catgaaaaag cgtgcagcga
     2881 tggtaggtgc ggattttgaa atgatagatg taagaaattc ctatcttcaa gaagtgcttt
     2941 ttaatccaca atatggctat ggcaaacatt ttaatccttg tatagattgt catgctttta
     3001 tgtttaaaac tgctcttgct atgttaaaag aagaaaatgc aagttttatc atcacaggag
     3061 aagttttagg acaacgccct atgagtcaaa gaagtgatgc aatggcaaag gttaaaaaac
     3121 ttgctcttga tgaagaagat ttaatcttgc gtcctatgtg tgcaaaaaac ctacctctaa
     3181 ccaaacctga aagagaaggt tgggtagata gagaaaaact cgaaggtatt agcggaagaa
     3241 gtcgtaaaag acaacttgaa cttgcagcta aatttggatt agaagacttt gaaagcccag
     3301 gtggaggttg tttgctaact cttgatagtt ttgctaaaaa aattcgagat ttcatagaat
     3361 ttgacaaaga tatgcaggtt aatgacgcac aacttttaaa atatggtcgt catttaagat
     3421 tacccaatgg agctaaaatg atcataggta gaaatgaact tgaaaatact cttttaaaag
     3481 gtttaaaaac tcctaaatat gaagtaatag aacttggaga tttaatcgga gcttactctt
     3541 tggtagatga aaaaatttca gaaaaagact tagaacttgc cttaaaaata gcccttacct
     3601 atactaaaca cgaagtagga aaaagctatg aacttaaatt taaaaatcaa gcttatacaa
     3661 gtatagcttt tgaaaataag gctgatatta atcaattttt tattagttaa agtataaagt
     3721 atttagcaaa acaagcgata tagtatttga atcttttcaa aatattgcaa tcaagcccat
     3781 gaaaatgggc tttttttatt ttaatccata agcatttttt aaattgttta aattcgcact
     3841 cgcattcaaa agcaaacaat cagccaaaac taaacgcacc atagcactag ctacaacact
     3901 tcctctaaca cctacacaag gatcatgcct acctttgagt tcaaattcca aattattgcc
     3961 aaatttatct atactttctt gcttggcaaa aatagaagga gtaggtttaa aataagtttt
     4021 taaaataaga ttttctccat ttgaaattcc tcctaaaatt cctccactat gattgcttaa
     4081 aaacttgcca tcttttaaag catcattatt atacgatccg cgcattttac ttgcattaat
     4141 accttcgcct atttcaactg ctttaacagc attaattccc attaaagcat gagctaattt
     4201 agagtctaac ttatcataaa gaacttctcc aagtcccaca agcataccac taacttttgt
     4261 aaaaacagca gcgcctacac tatcttttga atttctagca tttaaaattt catttttaaa
     4321 gtcactttct agttttggat caaggcaaaa aatttcactt ttcttagcaa attcaaaatc
     4381 aaattcttct tctttcaaat ttgatacaaa agttcctatt ccaaaaacac cactttgaac
     4441 acaaatgcca aattcacaca aaagcatcgc tgcaactgca ccaccagcca ctctagcaac
     4501 actttcccta gcgcttgatc tacccccacc cctatgatct cttatgccat atttataaaa
     4561 ataagtaaaa tccgcatgag caggacgaaa tagatctttt aaattatcat aatctttaga
     4621 atgagcattt tcattaaaaa ctactatagc tatgggatga cccgttgtat atccttcaaa
     4681 aaccccgctt aaaacctgag ctttatcgct ttcttttctt ggtgttgcaa atttacttcc
     4741 gcctttgcgt ttatcaagct cattttgcaa aaattcttca tcaaatttaa ccccagcagg
     4801 cattccatca ataatacatc caacagccac accatgagac tcaccaaaac ttgtaaattt
     4861 caatctcgta ccaaaggtat tcactataaa gctcctaatt tctcaagtgc aatttttgct
     4921 gccatttgct gtgcttcttt tttgcttccc gcaatagctc ttgcaagttc tttaccatca
     4981 agcattaaag cgatttcaaa ttgctttaaa tgatcaggac caaaagcacg cactgtttca
     5041 tactgcggag tttgtccgat ttttccctgt gtaatctctt gtaattttgt tttataatct
     5101 tttataagaa tttttgcatc aatttgaggg aaattttttt ctataagtct taaagcaata
     5161 gtttttgcaa actcaaaccc agcttctaaa tgtatagcac ctataatggc ttctaacgca
     5221 tctgaaagta tagaaggctt ttcttttcct ccattgtttt cctcagcaac actcataaaa
     5281 ataaaatcac ccaaatttaa actatttgca atttttgcaa aagacttttc attcactaaa
     5341 gccgctctaa gcttagataa atctccttcg gcatctttgg cgaatttatg aaaaaggtat
     5401 tcacctacaa ctaaatcaag cacggcatca cctaaaaatt ccaagcgttc gttgttgtaa
     5461 gattttttaa aacttttatg ggttaaagca tgtataagaa gatttttatc tttaaattca
     5521 taagttaaac tctgctctag cttttcaatg tttttcatca ttttcccttg caattttcaa
     5581 agcagcttca cgcgccaatg tatcacacct ttcattttcc aaatgtccat tatgtgcttt
     5641 tacccaaaaa gccttaatct tatgagattt tgccacttta atatattcct tccataaatc
     5701 tatatttttt ttacctttaa aatccttttt tatccatcct tctagccatt cattaatact
     5761 ttgaaccatt aggttagaat ctgtaaaaag cgaaatttca caaggctctt ttaaagcctt
     5821 caaagattca ataattgcca ttagctccat tctattgtta gtggtattag cctcagctcc
     5881 aaaaccttcc ttttgatact ccttataacg caaaatataa gcccatccgc caaaacctgg
     5941 attattaaga catgagccat ctgtataaat ttcaatgtgt ttcattgttt ttcacttcat
     6001 aaataatttt acaagtatta aactcataac aaacaggaca gtgataaaaa aacaaaggca
     6061 ttacattttt acactcagaa caacgatatg aaaattctaa ccccgcatta aaagaattat
     6121 cttttaaaat ttttaacatt ttaaagttag aatttttaaa aacaaactgg tgcgtatcat
     6181 catgctttga aattttaccc aaagcataaa agaattctaa aaaatcttga ttttctaaat
     6241 taaacgcttc attttctcta taaagcaaat cacaaatatc aaaaaaattt tgccctaaaa
     6301 acatatgata tttttcaaaa a
//
LOCUS       DARATF010000088         6304 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.088, whole genome shotgun sequence.
ACCESSION   DARATF010000088 DARATF010000000
VERSION     DARATF010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6304
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.088"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..695)
                     /locus_tag="SB502_001472"
     CDS             complement(<1..695)
                     /locus_tag="SB502_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEG0434898.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPITSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRSVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILY"
     gene            complement(775..2043)
                     /locus_tag="SB502_001473"
     CDS             complement(775..2043)
                     /locus_tag="SB502_001473"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEG0434899.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(2158..3333)
                     /locus_tag="SB502_001474"
     CDS             complement(2158..3333)
                     /locus_tag="SB502_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEG0434900.1"
                     /translation="MHQSVIDPQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAIIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEVAKKSFFYIFL
                     LYALSSLIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFGLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAVIVMSMIKFLSNSKK"
     gene            complement(3314..4150)
                     /locus_tag="SB502_001475"
     CDS             complement(3314..4150)
                     /locus_tag="SB502_001475"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HEG0434901.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLESSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     TVIMVAGGREVVLQERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(4152..6254)
                     /gene="topA"
                     /locus_tag="SB502_001476"
     CDS             complement(4152..6254)
                     /gene="topA"
                     /locus_tag="SB502_001476"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEG0434902.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEAYAISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFGKDYLPSKANVY
                     TTKTKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMSPAISQTQ
                     NVFVKNDRAVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGQNLKVQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVTIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
BASE COUNT         2030 a         1181 c          895 g         2198 t
ORIGIN      
        1 ctatataaaa tgtatttttt agaaaaatct cccataaatc ctccattttg attaatcaaa
       61 aaatctcctg ctacaatatc ccaaatatta agcttttcaa atcttttata aactcctgcc
      121 ctagcctcta aaatagcaca aaatttcaat ccagagccta tattaatagc ttctaattga
      181 tgctcttttg caaagtcttc atcttctttg ctaagatgat taacactcaa taaggcttta
      241 tatttatttt tctcgtattc ttgctggtca atttgcaaag gtttatcgtt tttataaacc
      301 ttggtttttg catgagcata gaatatatca ccttttgatg gattttgtat gagtgataaa
      361 acagagcgat tgtcatgaac caaacttatc ataacgcaaa attcatcact gccttttaaa
      421 aaaccacttg ttccatcaag aggatcgata agccaaaaag tttttaattc ttcacactct
      481 tctttgctga gtaatttttc ttctgataga attttaatat ccgtagaacc caaaatatca
      541 tttagaattt tattagaagc aagatctgct gatgtaatcg ggcttttatc ttctttttcc
      601 caagttttga aattttttct ctcttctaaa atagctttag aagcttgatt gctagcattt
      661 atagcaattt ctaaaaattt atcaagatta agcatgatta taaactttct ataagatttt
      721 ttaaaattat acaagaagat tttgtggaat ttttaatttc cacaaaaatt ttaattatat
      781 tttactagtt tcacccaaat aaagttgtct tggacggact attttaagac tttcttgctc
      841 tttttgctct atccactgag ctatccatcc tggggtgcgt cctataacaa ataaagtagc
      901 aaacatttca tttggaatac ctaaggcttt taaaataagt ccactatgaa aatcaacatt
      961 cggatatagc cctctttgaa caaaataatc atcacttaaa gcaatctctt ctatacgcgt
     1021 tgctacttta ataagattgg tatcaatacc caactcatca ataagttgat cacgaagttt
     1081 tttaagtact tttgctctag gatcaaaatt tttataaacc ctatgcccaa agcccatcaa
     1141 gcggaaagga tcgtttttat ccttagctct tttgatgaat tcatctaccc tatcaacact
     1201 acctatttgc tcaagcattc taataacacc ttcattagct ccaccatgtg catgacccca
     1261 aagcgcacca atacctgctg ctatacaggc ataaggatga gcgtgagttg aacccacagc
     1321 acgaactgtt gaagttgaag cattttgctc atgatctgca tgaagcataa aaactgtatc
     1381 aagtgctttt acttctatag gtttaagctc tacatgatcg taaggatagg ttcttaacat
     1441 atataagaaa ttttctgtaa aaccacgatc taaatttgga taagccatag gaaagccgtg
     1501 tttatatcta taagcagtag ccactatagt agggatttta gctactattc tagctgccat
     1561 ttccatatat tcttctttta cattcatgtt taaatgatca ggataaaaag cactaagcga
     1621 tgaaacagca ccttgtaaaa ctgccatagg atgagcatta tcagggaaag aatcaaaaag
     1681 acgatgcata ccttcatgga taaaagaacg ctttttcatt tcataacgaa atgcttcaag
     1741 acgcgtagca tcaggcaatt ctttataaag caaaagatga accacatcta aataaagttt
     1801 gttttcagca agccactcta taggatagcc acggtgcatt aaaattccgt tttctccatc
     1861 aatataagtg atttttgatt tacaagtagc tgtagaagtc aagccctcat cataagaaaa
     1921 cattcctgtt tgtttataaa aacttgacat atctacaacg cttggcccag ttgtaccgtc
     1981 atatatagga aattcatagc tttttccatt tctattatcg gttatagtaa cggaatttga
     2041 cattttcgct ccttttattg ttacttttat taattctaac aaaaaaggac gattatgagt
     2101 ttttttatta ttaaattttt aagattttat ttgctttttt gagtaaaaaa gtaactttca
     2161 ttttttagaa ttagaaagaa atttaatcat actcataaca ataacagcct caaataacgc
     2221 tgttaaaata agtgctgaat aaagcttctc atcaataacc ttgcccgaat aacccagagt
     2281 agctgttgct ataagcaagg ttaaaggcat agaatgacta agaccaaata aaatcatatt
     2341 tttaaaacca attcttttta aaaaaacact tgcacataaa attcttaaac ccaccataac
     2401 aaacataagt aaaaatgctt gtaaaacgat tttataatct aaaatcattt taagatcaaa
     2461 ggttgaacct atatggataa aaaaaatagg gatcaaaaac ccgtgtccaa aagtagaaag
     2521 cttgtgctca agatcttttt tatgatcaaa aaaagtagct ataaatgaac ctgctataaa
     2581 agaaccaaga acgatttcaa gttttgtaat aaccatagca acaatgatca gtataaaaat
     2641 ggccatacaa aatcttatat ctttttcatt tttatcttcc catggcataa gcacaacttt
     2701 aagctgagga taccaccaaa aaagcacacc aagcatttta aatccgagca aacaaagtcc
     2761 caaaaagata ttaagatata aaatactttg cgctacatca ataatacctg ttccttcgcg
     2821 caaaaaagct cccgctatag tcaaaagcac aatagaaatc acctcagcta aagtagccac
     2881 tatcatagca atatttagcc aataacactc ttttccaaaa tccttaaaaa gcaaagataa
     2941 aagccctaca ctcatcacag gtataatgat aacaaatact aaagaaagtc caaaaatcca
     3001 tactataaga gaagataaag cgtaaagtaa aaaaatataa aaaaaacttt ttttggcgac
     3061 ttctttatcc atattaaaaa aggctcttaa atttacctcc atacccgcta taaacattag
     3121 ataataaaaa cctacattgg ctaaaagtgc aaaattttca ctttttccta tgaaaccaaa
     3181 atatgctatt attgccccta aaataatttc agtagctgaa agaggcaagc gtaaaatttt
     3241 tgcaatatgc ggagaaaaaa gtaagcataa agctataaca ataagaattt ttagatcaat
     3301 taaaccttgt ggatcaatga cactctgatg caaaagtaaa tcccatttct tttaatttta
     3361 ttatatcttg acttggttct tcacctttag tggttaaata atcccctata acaatagccc
     3421 cagcacctgc ttgaaaaatt tcatactgcc tttcttgcaa taccacttca cgtccacctg
     3481 caaccatgat tacagtttga ggcaaagcct ctttggtgtc acgcacgatt tttaaagctt
     3541 catcagcact aagtcttgga acttgtagtt ttaaattttc atttgctata aaaaaattaa
     3601 taggcgttga aaaaggttgt aattcttgca aagattttct aaaacttagc ctatcttctt
     3661 cgctctcacc cataccataa attccaccac aacaaagcat aagccctgct tctttagcgt
     3721 ttaaattggt ttgaaatcta ctttcccaag tatgtgtggt gcaaatttgt ggaaaaaatt
     3781 ccttagaact ttcaagattg tgattataag aaaaaattcc tgctttttta agttctttga
     3841 gttgttccac gcttgccata ccattacagg caattaaaag caaattaggt acttcttttt
     3901 gcacagcctt ggcagcttcg caaacatact caagcttttc atcatcaagc ccaagtcctg
     3961 ccgtaaccaa acaaaaaccc aaggcttcat ttttctttgc catttttgct tctaaaacga
     4021 tttgtgaaag ttctttacga cgatattttt gaatatctgt ttttacatga gcgctttggg
     4081 tgcagtattt acagtcttct gaacaatttc cactggctat atttgaaata gcacaaagca
     4141 tgatttgcat tctaatcctt catttctttt ttgattttac actttaaaca ttctaagaat
     4201 gtaccttttt taagctcttt tatcactaaa gtttcgccac actcttcgca tttttcttca
     4261 cttggtttgt atttgcttat aaaattgcat tttggataag cactacagcc ataaaattta
     4321 ccacgttttg aaaagcgttc tacgatttca cctttttgac aacttggaca agtaatgcct
     4381 gtaccattag ctttagcttt tgcggctgta ttttcgcttt cgtttttgct ttcacttttt
     4441 aaatttcttg aatacttgca ttttgggaaa tttaaacacg ctacaaattc tccaaaacgc
     4501 ccttttctaa tagcaagctc tccgccacaa tcaggacaac tttcgcctag ttttgtgaca
     4561 gttttttgac tagctatttt tgtttttcct tcttcgattt ttctcataaa aggatagtaa
     4621 aattctttta aagtttcttg ccaatctgcc ttatcttctg cgatttcatc tagggtattt
     4681 tcaaggtttg aagtaaattt actatctact atatcgctaa aatttttctc aagcacttcg
     4741 gttacattaa aagcaacatc gctaggaatg agttgttttt tatctattgt tacataatca
     4801 cggcttgtaa gtatagaaat ggttggcgca taggtagaag ggcgacctat gcctaaactt
     4861 tcaagttttt ttacaagtcc tgcttctgaa taccttgaag gtggttcggt aaaatgtgag
     4921 ttcatttcta aattttgcac ttttaaattt tggcctattt taaaatttgg caaaatttta
     4981 tccttatcca tatcaccata aactttataa tatccatcaa aaaggatttt tctaccgctt
     5041 attttaaaaa ctgctctatc attttttaca aatacatttt gagtttgaga gatagcagga
     5101 ctcatctgac aggctaaaaa gcgattgtaa ataagtgtgt aaagttttaa ctcatctttg
     5161 tctaaaaatt tagccgcaat ttctggagta aaacttaaat ttgtagggcg tatagcttca
     5221 tgagcttctt gagcgccttt agtctttgta gtatatacat ttgctttgct tggaagatag
     5281 tccttgccaa aatttgcttg tatgaatttt cttgcatttt ctactgcttc tttggctaaa
     5341 tttaaactat cggttctcat ataagtaata acccccatca cgccttcatg ggtatttact
     5401 ccttcataga gcttttgagc tatcatcatg gtttttttag ggttaaaacc aaggcgattg
     5461 ctggcacttt gctgcaaggt tgaagtcata aaaggaggag gcggagcgat ttttctttct
     5521 ttgctttcaa tgtcgcttat agcataagct tcatttttac aagcctctag tataagctta
     5581 gcacgatctt tgttggtaat ggtaagtttt tctatcttag ctttgtcaaa ctcaaccagt
     5641 tctgcatcta aatctttttg aaaaatcata tcaatactaa agtattctag gggtacaaag
     5701 gcacgaattt ctttttcacg atcgactatg atctttaaag ccgcactttg aacacgccca
     5761 gcactaagtc ctctttgaat tttttgtcct aataaagggc tgagcttata ccctacaatg
     5821 cgatctaaaa gacgtctggt ttgctgagca tttacagagt gcatgtttaa ttttcttgga
     5881 ttttttaaag cattttctat agcgctttta gtgatttcat gaaaaacaat gcgtggtaag
     5941 gtgttttcat cttttcctat agcttttgca atatgatagg ctatagcctc tccttctcta
     6001 tcttcatccg ttgcaagata gacttctttg gcatctttgg ctttgctttt aagttcttta
     6061 actaaggcgc tatgatcact tgtgattcta tactcaggga taaattcatc atcttctatt
     6121 ttaatcccaa agcttgattt aggcaaatct ctaatatgtc ctttagaagc gataacttca
     6181 taatcttttc ccaaaaaatt tcctatggtt ttagcttttg caggagattc tactatgatt
     6241 aaatttttct tcattttgca cccttgttaa ataaaaagct gaatttagct aaaaatattt
     6301 aaaa
//
LOCUS       DARATF010000089         6303 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.089, whole genome shotgun sequence.
ACCESSION   DARATF010000089 DARATF010000000
VERSION     DARATF010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6303
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.089"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(25..1703)
                     /locus_tag="SB502_001477"
                     /pseudo
     CDS             complement(25..1703)
                     /locus_tag="SB502_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893445.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(1713..2750)
                     /locus_tag="SB502_001478"
                     /pseudo
     CDS             complement(1713..2750)
                     /locus_tag="SB502_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002895311.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2755..4350)
                     /locus_tag="SB502_001479"
                     /pseudo
     CDS             complement(2755..4350)
                     /locus_tag="SB502_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873680.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            complement(4362..6290)
                     /locus_tag="SB502_001480"
     CDS             complement(4362..6290)
                     /locus_tag="SB502_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434903.1"
                     /translation="MGVENIYTLPLNGAPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDERITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNVSKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLDKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGGFATEGANFNIIDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNTL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINTKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCSSAAVESSCIIKADKES
                     AFNKIIINNTVFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNRLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPSNGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNRLLNQQELENLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
BASE COUNT         1991 a         1120 c          732 g         2460 t
ORIGIN      
        1 ggggaatttc caatcacccc aaagttaaaa gtattttcct aggcttgcat aaactcttgc
       61 tcgatgttct ccatcgtgtt taagccgata aacagctctt gcagcatcca tttttacata
      121 aaaattagca cttcttgtat agagtatttg tatacccatt gcatccataa gataatgatt
      181 ttcactttga tattttttat tttcatacca agaataccct atatcataaa aaggagtcga
      241 gtaaagccct tctaaaggtg tttgaaatct tattcccaag gtgccagaaa caacattatc
      301 cgcacttccc tcaccttcca aacaaacaca tacaccacaa ggtctaccta aagatacgga
      361 ttcactacta tctaaaacag tatcgctgat aactttttga taattgagtt gaaaaatgtg
      421 agttaagcgt tcttagaatt gatatttgtt gcttaaattt aaattcattt ttccaaaatt
      481 tcctaaattt actccattaa atccagaaaa atcaccatca ttttcaacat taccatatat
      541 aaaatttaaa gtataactta ggacattatt ctccaaacct ctataagttc tttctatgcc
      601 caaatttaca ctatttctcg ctttttcatt gcttactaaa ccatcaagat aataatcttt
      661 aatcttttta tgagtaaaac ccgaaacaag atataaagaa tactcagtat ataaaaacac
      721 aggataagaa aaatttactc caacattcat agagtcccta taaaaactaa gatttctata
      781 aattctgcca ggaatataat gtccttgagt tgcaaatgga gtaattttta aattccctat
      841 aaaagtacta taattaatcc cataatctgt ttgattttta tcactatctt gaagataaaa
      901 atttaagtta tccccttatc ttgctatatt gtttaaactt tgactcattc ctgctctaaa
      961 acgacctgtt tctttagtcc catagttgtt agaatataaa gttaaagttg cactatctca
     1021 cctttcttta cttctataat aacatcactt tctccacaac catcacctga ttgtaaatta
     1081 gcattggttt ggattccgta tatttcattg attttataaa tttcattttc cacattttta
     1141 gttgtgataa ctttcccttt aagatttttg ttcaatttac tctctaaagc ataatctctg
     1201 acacctgagt tgtttttaat gattactttt cctaaaagtt ccaaaagcta tgttaatttg
     1261 cactttgtta gaacttaaat cttgcggtgg tatataagca gttgccgaag gatgactact
     1321 taattgacaa taataagcta taatgtttgt tatatctttt aaattttgta agcttaattc
     1381 ttggttgcga tattcagcta ttgcatcttg aatttatttt tcgctaattc ttaatttttt
     1441 aaatgtcaaa tctttattat cgatatgcaa aacatactct cttacaaaaa ccttagcttc
     1501 attttgatca gtttgtaaat ttgcaatatt tgtagtattt tgctctttaa aatttacagg
     1561 gcttttttga ttttttaatg tattttttaa tttttatttt gtggtccatt tgcttcagaa
     1621 gagctttcta taagctctct tattttatta ttatttagct cttcagcatg tgaaaatact
     1681 tgcaataaga ttaaatttct catttttatt tcctatttta catttacaca aatgttcatt
     1741 gtcttaaaat tatcacttac aatacaacgc aaaccactac ttctagcatc tgcttttcct
     1801 atgtccactt gatcatcatc ttcttttttt gtgtctactt tagtttgaat ttttatagga
     1861 gcttctacaa ccttttcagg aatttcaggc ggcaatacag aaggtttgtc tggatcttca
     1921 ccccctccct ctttttttgt ttatctggct catagataga tatatttgat ttttctggca
     1981 atgaggctaa ttttccttca aaattatatt ttccagtgta cactttacca tctacatcgc
     2041 ttccatttat agcaaaacct tgagaattta gaatctcatt ttcaagctta tagtgaaatc
     2101 cttcatttcc actaagatcc gcaaactgct tttcaagagc ttctttttgt tctaaaagtt
     2161 ttgcatacat aactctaagc gtttcatcgc taactaagcc tgattctttg attttttcat
     2221 agtttttatt ttctttgtca agttgagcta aggcttcttg gtatttttgt aattcttctt
     2281 taaaactagc gaaacaacct ttgccggttt tgattttatc catagcagtt ttcttttgcg
     2341 tccatttttc ataaagattg gtataatttt tataactttg ttcttgcgaa ccttgccata
     2401 actttaaaaa ttcttgttct actccagtat ctttaaatgt atttaagaaa tttaaacttt
     2461 gagtgatctc actggcttca ttttcccctg ccacaccctt gctatctgcg taaatccaag
     2521 ttttggtatc aaaaccataa gtgtattttc cattcatcaa atcatctaaa attctttgaa
     2581 gcaatttagg gtcaaagtcg tctttggata atttcacagc atctgttacc ttggtaaaag
     2641 aatcagcaaa agcataagaa ttattatcaa gatattttat atcgttaaat ttctttctta
     2701 cagcactatc aaaatctttt ttttcctgtt acttcactat tatattgcac agacttaaaa
     2761 aaaattctgt ccttcatcaa tgtaaccatt ttctaaatta tgataaacat aaatattact
     2821 aaaattatta tttacactaa ttccaggatc accaataact tttccagctt gtgttttata
     2881 atttccagca ctcaaaattg ctccattttt ataaaataag taagcattat taatctttaa
     2941 atttccaact tttccagtaa atcctcctgt tttactatca ttcccagaag ttataagttt
     3001 ttctatgtca ttaaccacaa cattattaaa attaccacca tcaatttgtc tgcctatgcc
     3061 acccacataa gaaccttctt ttgttactat acttatatta ttaataacaa catttgtaaa
     3121 attgatagtg ttattccctc cactaccatt tccccagcct attattccgc caactttagt
     3181 atttacagct gtattaataa cgagatcatt aacagtcaca ttttcaaaac ccgtataact
     3241 gtttgcaata ttttgcccta ctatacctcc aacataagca tcataaccag ttgaagcaat
     3301 tttcaatcct tgaatattaa ggtttcttat atagctattt tgaacaactc caaaaattcc
     3361 tacatattga tttgatgaat taatattaac attttttaaa gcataaccag aaccatcgaa
     3421 agatttagca aaagcattgc ttgtattatc acctactatg tatgttttca cgccactaaa
     3481 atcaatatca tcaatcaaac gaaaatgatc aaaagctgtt ctaaattttt ctttatttac
     3541 attccaaaaa tcagcaaatt tattccattc tgttggatcc gcaatacttc catatttagt
     3601 ccagttttta actttactac tatcatcaaa actaaattta ctactagaat tacccaataa
     3661 agctccattt tcttcaaaac ttgttatgct ttgttgaatg atagcttctt gctctgcttt
     3721 ggctacgata ttttttgtat cttttaccac tccagcatca acataaactt tgttaccttc
     3781 aagttttaat acatccaaag taatttttcc tttattgatt tcaaccttat ttcctattaa
     3841 aacaatatta tctgcattga tctttccaag atttataata tttccttgct tgcttacatc
     3901 aaatactgga gaaaaattca tcccttgaga aataaaattt tggacatctg aatcttttaa
     3961 aggtgttgtg ctagctacaa attttcccgc agtgatagtt cctgttttgc caatcaaaac
     4021 tcccatggga ttaactaaaa agatgttatt ggtgccgcca tctagttttc catctatctt
     4081 agaagcatct ttttgataag caatgtttag gtagttttat tgatttccgt taaattttac
     4141 agtttcattt tgtcctatat taaaaccacc accccattga ataacagagt ttttattgtt
     4201 tcctatgaca ttcatcgtgc cattgcttga acttatactt cctgttgaac catgagtgaa
     4261 tttacctcct tgtggcaaag cataagcttg agaaaagagc aaagaactca ccgcaaatga
     4321 taaaactata tgtttactca tctttttcat gttactctcc tttaaagtat gttgatataa
     4381 attatttttg catcatctga aacttcaaag ctaaaattta catttttcaa tgtactttta
     4441 gccaactttt ctatcttgtt gtaattaaat ttatttttat tatttttcat tttttctaac
     4501 aaattttcta attcttgttg atttaacaat ctattgtcac catcataaat tccaacatca
     4561 ctttgtatga gaatatattt tccttttgtt ggtttatttt tagtaagaat ttccatactt
     4621 ccatttgaag gaagatttat aagtttttct atagtcaaga taggattttt tattttattt
     4681 ggtaaaataa aagtaaaatt ttcaaagtta tttaccactt ctgatttgac atcttgagta
     4741 tctataatca aacgattatt tttagaaaaa tcttcttgat gcggtagaat ttgagtgatt
     4801 attttgcctt ttttatttac ttcatgaaaa acagaaccag aaagcaaatc gatatttaca
     4861 tctttaaaga aatttaactc tccacctaaa tataaagtat tgttataaga tttaaaattt
     4921 gaaatatccg aagttccaga tggagctaaa aatatagcat cttgattttt atactcatct
     4981 atatttaaat taacaagctc catgatatta tcatgagaat ttgcagacac tccagctatc
     5041 aaccccacat aaccttgtct tttatctgag gcagtactaa aaactgtgtt gttgatgatg
     5101 attttattaa aagcactttc tttgtctgct tttatgatgc acgaactttc cacggcagcc
     5161 gaagaacaat ctttaagctt tataagattg ttgtttgcat tttgagttgc ttttaaaata
     5221 atttttgagc cctttcctaa agaactcgct tcggttaaac tctgaatgag attataattt
     5281 attttattat ttgaaacatt tttagtattg atcatcaaac ttaaattttt agatgattta
     5341 atattttcaa aatttacttc attattgttt gattcatcag cgatatagtc tataccatct
     5401 agcgtagttt cacttgtaat aaaagcatat aaaggcaatg aaataacaga atcttttata
     5461 cttaaggtat tattatttgc ttttccactt aaagttctag ctgcatatac agtaaattta
     5521 tcagaataat tttgtggaac tttttcatag gttaaatcat tttgtatatc aataatatta
     5581 aaattcgcac cctccgtagc aaaacctccg taaagattgt aataattttt tccataaaaa
     5641 ttatcactga tttttaaagg ttttttaaga cgaaatacaa ttttatttcc attagcttca
     5701 ccatcgttag aatacccacc atagaggttt aacgatgcat gtgttttaat gtttttatca
     5761 agatgatcta atgagttaaa atgataaact tctatagaat ttttctctgc attaccctgt
     5821 aatgttcttc cgccataaat ttctccaaat aaaacagcat cataaaaagt tattttattt
     5881 tgcgaattta ccattaaatc taaatttaaa tttttaatta ttacggaatt tttacttaca
     5941 ttgtattttt taagattatt tacatcagct aaagcaccta aaatttcaaa ggtcgaacga
     6001 gctgtatact caccatctgg cccatgaagg acgatattgg ctgaatcgat aagaacttta
     6061 ttgttttgta aattagaatt tatgccaaaa gctcccatta aacgagtaat tctttcatca
     6121 taaatatcct taccttcttc atctgaaaaa tactgggaat tatgaaggtc aatttttgta
     6181 tttgactcta agattaattt attgtcttta gcttcaccat caaaagctac agatcctgaa
     6241 atataaggag ctccatttaa gggcaaggtg tagatatttt ctacacccat tattaatata
     6301 gga
//
LOCUS       DARATF010000090         6109 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.090, whole genome shotgun sequence.
ACCESSION   DARATF010000090 DARATF010000000
VERSION     DARATF010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6109
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.090"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..443)
                     /locus_tag="SB502_001481"
     CDS             complement(<1..443)
                     /locus_tag="SB502_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434904.1"
                     /translation="MIRNFFIGMSFLGILFLAFYTLYDKKKESIFSLNTCQPLTCDLN
                     LQDCVFSFNKKNIEVSAYPKPIKIFNKTTIKIKNFPHYSNLKIKIYSLNSYIGDIIPK
                     FNIVNGDILINFIGRSITDDSRFRVEFLNNNAPTGFFFDFDVTMQ"
     gene            600..1576
                     /locus_tag="SB502_001482"
                     /pseudo
     CDS             600..1576
                     /locus_tag="SB502_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
     gene            1577..2563
                     /locus_tag="SB502_001483"
     CDS             1577..2563
                     /locus_tag="SB502_001483"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEG0434905.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNY
                     KQDIKIHLKIDTGMHRNGICVENLEHAINLIQGSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKV
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            2566..3033
                     /locus_tag="SB502_001484"
     CDS             2566..3033
                     /locus_tag="SB502_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEG0434906.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPTVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENMIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFRNFAS"
     gene            3137..4603
                     /locus_tag="SB502_001485"
     CDS             3137..4603
                     /locus_tag="SB502_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEG0434907.1"
                     /translation="MKLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHAKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVIHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGESKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNMQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(4631..5359)
                     /locus_tag="SB502_001486"
     CDS             complement(4631..5359)
                     /locus_tag="SB502_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0434908.1"
                     /translation="MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(5352..6095)
                     /locus_tag="SB502_001487"
     CDS             complement(5352..6095)
                     /locus_tag="SB502_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0434909.1"
                     /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGVASYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILHFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
BASE COUNT         2110 a          787 c          999 g         2213 t
ORIGIN      
        1 ttttgcatag taacatcaaa atcaaagaaa aaaccagttg gagcattatt gtttaaaaat
       61 tcaaccctaa atctagaatc atcggtaatg cttctaccta taaaatttat aagaatatca
      121 ccattaacta tattaaattt aggaatgata tcgcctatat aggaatttaa actataaatt
      181 ttaatcttta aattagaata atgaggaaaa ttcttaattt ttatagtagt tttattgaaa
      241 atttttatag gttttgggta ggctgaaact tcaatatttt ttttattaaa agaaaaaaca
      301 caatcttgta aatttaagtc acaagttaga ggttggcatg tatttaagct aaatatactt
      361 tctttctttt tatcatataa tgtataaaaa gctaaaaaca aaatgcctaa aaaagacatt
      421 cctataaaaa aatttcttat cattatagac aaccttttaa aacaagcctt tatgatttgt
      481 aaaaattata tcataaataa ggctgcattg ttaatataat taatattttt taagaaaaaa
      541 aatattataa tcacaaacat ttttgactta aaaaaatttg aaatacctaa ggaaaaacat
      601 tgttaaaacg acttgcttta ttaattgcac tttcttcatt ggtgttgcat gcctcagatc
      661 ttgttaaaat ttatcttaat caaggattag atgctgttgg tgtagcgatt gaaaaagaat
      721 taactcaaaa ggatttttgg ttaagtgaaa taggagataa aaatatttca cttggatact
      781 atgatgataa tgttgctatc gtgcttacaa ataaaacaga taaaattctc cgtgtttatt
      841 cttacgagga cggaaaaata agaaaagatt ttgaacaaaa agaaataata actggattaa
      901 tgggtgataa aaaaatagaa ggagatttga aaacgccagt aggtttttat gagttaggcc
      961 gtaagtttaa tccaggtgat ccttattatg gtccctttgc ttttgccaca acttatccaa
     1021 atttacttga taaagtacaa ggaaaaacag gtggtggtat ttggatccat ggctatcctt
     1081 tagatggttc tagacttgat gaatttaaaa caagagggtg tattgcttta tttaataata
     1141 atttggagaa atttgcaaaa gttgtgcaag ataaaaaagt ttttgttatg acagaagaaa
     1201 aagaaaaaat tagagctaaa aaggatcaaa tcgctagttt attggctgat ctttttacat
     1261 ggaaactagc ttggacaaat agtgacacta atgcctattt aagtttttat gatgagcaag
     1321 aatttaaacg ttttgataaa atgaaatttg aacagtttgc ttccatgaaa aaatctattt
     1381 tttctcgtaa agaagataaa aagattaaat tttcagatat taatatcagc cctttccgaa
     1441 tttagaaaat gaaactatgt atagaatttc attttatgag gattattaca ctaaaaacta
     1501 tcagtttaga ggcgataaaa ttttatacgt taagatagat agtaaaggta aaatgaaaat
     1561 tttagcagag caataaatgt ctttaataaa aattgatcaa aaagcttatg aatacaattt
     1621 aagacatatt gctaaaaaaa tagggagttt tcaaagatta atttgtgttt ttaaagataa
     1681 tgcatatgga catggagcta agcttttagc tccattagcc aaaaatttag gagtttcttt
     1741 tgttgctgtt aagagtgaag aagaagctcg agaaatcgaa gaattttttg agaatatatt
     1801 aatactatca catcgtcctc atggtaatga aaattctcga tttatttatg ctttaaatga
     1861 catttctcaa gtaaaaaatt acaagcaaga tataaaaata catctaaaaa tagatacagg
     1921 catgcatcgc aatggaattt gtgtagaaaa tttagagcat gctataaatc ttattcaagg
     1981 tagtgattta aaacttactg gaatgtttac acattttgct agtgcagatg aaatggatgg
     2041 aagttttttt gttcaaaaag aaaattttca aaaagctaaa aagatagtaa aaaaatattt
     2101 ttcaaattta ttatttcatt cgcataattc tgcagcatta tttagaggga aaattcccga
     2161 agatgaatat tgtagagttg ggcttgttca atttggatat ggggattcaa atttaaaaag
     2221 agttttaagc ttgtatgctc atagattaag tcaaaggatt ttacaaaaag gacagagtat
     2281 aggatatgga ggcattttta ctgctgcaaa ggatatggaa gtagcaactt atgatttggg
     2341 ttatgctgat ggtcttttcc gatacaatgg aaaaggggag ttagtgcttg gaaatggaaa
     2401 agtaatgctt ggaaagatgt caatggatag tttttcttgt gaaaattctg gtgaggaaat
     2461 ttgcgtgttt aaagatgctg atatttgggc tgattttttt catactatta actatgaaat
     2521 tttagtaaaa ttaaatccta atattcaaag agttctagta taaatatgtt taatatagtt
     2581 ttagtccacc ctagaatacc gcaaaataca ggtagtatag gtagaatgtg ctttaatgct
     2641 ggttttaaac ttcatattgt taaaccaact gtttttgata tttcacaaaa ggctgttaga
     2701 agggcaggac ttgattactg ggataaatta gagcctatta tttgggagaa tcttgaagaa
     2761 tttttgaatg aaaatatgat ttataaaaat cgcttttttt tcgcaacaac taagagtcaa
     2821 aaagcttatt ttgatgcaga atttcaaaaa aatgatttct tattctttgg aagtgagagt
     2881 tatggtttgc ctatggaatt aatgcaatta aattgggaaa atgctataac tatacctatg
     2941 aaatcttatg gaagaagttt aaatttagcc acaagcgttg gtataatctc ttatgaagct
     3001 ttaagacaaa attttagaaa ttttgcttct taaaagtttc aaatttacac aatagcttaa
     3061 aacaaataaa atcataaagt cctttttata aaaattatgt taaagtaaaa ttcagattat
     3121 tttttgagga gtttggatga aattagatat tatgctagat tttgccaata aagcgtctga
     3181 tattatagct aataagattg tcccaaatac agacattatt atggtagttt tacttattgt
     3241 ttgtgggctt tattatagtt ttttaactcg ctttgttcag tttcgtatgt tgagttctgt
     3301 atttaaaatt cttacagaaa aaaacgaagg acacgctaaa gaacatattt caccttttca
     3361 agcattaatg atctcaactg cttctagagt tggtatagga aatattgctg gaatttcttt
     3421 ggcattggct acaggtggag ctggtgcttt attttggatg tgggttatgg cattttttgg
     3481 tggtgcctca gcatttgctg aaagtacctt agctcaagtt tacaaatcaa aagatgatac
     3541 aggcgggttt aaaggtggtc cagcttatta tataaaaaaa gccttaggct cacatttttt
     3601 tggagctttt tttgctttta ttcttattat tacttatgct tatggattta atggacttca
     3661 aagtcaaaca atgacttcgt cttttaaagt ttattatgat atgtttaatc caaatgctgc
     3721 tgtagatttt gcatcaagtt cttggccaat gattattggt attgttttaa ctatttttgg
     3781 tgcatggatg tttttttctc accatactaa aataggtaaa attagttctt taattgttcc
     3841 ttttatggct ttagcttatg ttttacttgc cgtgattgct gttttaatga attttgataa
     3901 aattccttct gtgattcata tgattttaca aagtgctttt gattttaaag cgatttttgg
     3961 tggttttgct ggttctgctt tggttatagg gattaaaaga ggactttttt caaacgaagc
     4021 gggtatgggc tcggcaccta atgcagctgc agcagctttg acaagtcatc cagctaaaca
     4081 aggtgttata caagcctttt cagttttaat tgatgttgtt gtttgtacaa gttctggatt
     4141 tttagttctt ttttctatgg catatttagg acttggagaa agtaaaattg acggtggaat
     4201 gcctttagtt caagaagcta tgcgtgagta ttacggtagc tttggaatcc attttattac
     4261 tatagctatt gttctttttg caataacttc tttaatagga aattattatt atgctcaagc
     4321 taatgttaaa tatttaacaa attccaaatt tgtaatgaat ttgtttagaa ttacagctgt
     4381 ggctatgatt tttataggct cgcaaatgaa tttaaaactt gcttggaatt tggctgattt
     4441 gactatggct ttcatggcaa cgacaaatat tatatcttta ttgcttttag gtggtatagt
     4501 aaataaagtt ttaaaagatt ttaatatgca acaaaaatct ggtatagatc ctaaatttaa
     4561 tgctagcaaa cttggaatta aaaacgctga atgttgggat taaaattcat aagccttagt
     4621 ggcttatgaa ttaatgattt aaaaccttgt ttaaaaattc tctcaatctt tcattgctag
     4681 gattttcaaa tacttcttta gggcttgcat caacagcaat ttttccttta tccataaaaa
     4741 atatacgatt ggcaacattt ctagcaaagc ccatttcatg agttactaca agcatagtta
     4801 aaccttcttt tgcaacatct ttcataatgc ttagaacctc gcctatcatt tcaggatcta
     4861 gagctgaagt aggttcatca aataaaataa catcaggatt catcatcaag cttctagcaa
     4921 tagctatgcg ttgtttttgt ccgccagaga gcttatgggg cattatattt tctttgtctg
     4981 ctaaacccac cttagcaaga agtaattttg ctttttttat ggcttcttct tgacttaaaa
     5041 ttcctgtttt aatgggcgtt aaacataaat tttccataac atttttattg gcaaaaagat
     5101 taaaatgctg aaataccatg ctaacttttt gcctgatctt attaatatca atttctttat
     5161 caagtatgtt ttgcttattg attaaaattt ccccactatc agctagttct aagcgattga
     5221 tgcagcgtaa aaatgtactt tttccgcctc cacttggacc tatgatagct attacatcgc
     5281 cttttgagat tgtagtgtta atatttttta aaacttctaa ttctccatat tttttttgta
     5341 aatttttaac ttcaatcatt tttattcatc ctaagttcaa gtttttttgc aaaatagcta
     5401 aaaattttta cacttacata ataaacaagt ccagtgaaaa taataggttt tggattgtaa
     5461 agtacggctt gcaagctttg actttgcatg gtaatatcaa taacactaat aaatcctaca
     5521 acagaagttt ccttaaataa agaaataaat tcattagcta atgcaggtag aatgttttta
     5581 gtagcctgtg gaagaataat ttctttcatt gaagttttgt aatcaagtcc cattgctctt
     5641 gcagcttcca tttgtccctt atctacacta ttaatgccac ttcttacaat ttctgctata
     5701 taagccgagc tattaagtcc tagtgcaaga atggctgcat aaaggttatc tataaaagta
     5761 aaaattacaa aagcaaaaat catcaattgt aaaattactg gtgttcctcg tataatgtct
     5821 atatattcat ctataataaa attaagcgtt ttaaatttag agaagtgtaa aatagctaag
     5881 ctaaaaccaa taatcactcc gataataaca gcacaagcag ttaataaaag cgtaataaga
     5941 taacttttta aataagcttt tgcattttct gtatagccat agcttgcaac tccactagga
     6001 tcttgaattt ttaatatttc tatcgggaaa gaaaaatagc cccataaaat aataataaca
     6061 aaaaaaacaa aaattcttat atttttctga ttcaatttgt aaacctttt
//
LOCUS       DARATF010000091         6048 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.091, whole genome shotgun sequence.
ACCESSION   DARATF010000091 DARATF010000000
VERSION     DARATF010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.091"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..327)
                     /locus_tag="SB502_001488"
     CDS             complement(<1..327)
                     /locus_tag="SB502_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434910.1"
                     /translation="MKELFQKIWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSMQNAQICILNLFKSGFISKQDLLKALKILEKISK
                     NTEIFDF"
     gene            complement(355..1080)
                     /locus_tag="SB502_001489"
     CDS             complement(355..1080)
                     /locus_tag="SB502_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HEG0434911.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(1073..3064)
                     /locus_tag="SB502_001490"
     CDS             complement(1073..3064)
                     /locus_tag="SB502_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HEG0434912.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(3048..3830)
                     /locus_tag="SB502_001491"
     CDS             complement(3048..3830)
                     /locus_tag="SB502_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HEG0434913.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            complement(3899..4714)
                     /locus_tag="SB502_001492"
     CDS             complement(3899..4714)
                     /locus_tag="SB502_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEG0434914.1"
                     /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            4804..5703
                     /locus_tag="SB502_001493"
     CDS             4804..5703
                     /locus_tag="SB502_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HEG0434915.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALEPINIEQNNNYSDYFENSVLKIRIEKEIDLLKQNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNAQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTN
                     LSSNTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENTPTQNI
                     PTNPSSTNQNNQSKNQDGVEIFE"
     gene            complement(5778..>6048)
                     /locus_tag="SB502_001494"
     CDS             complement(5778..>6048)
                     /locus_tag="SB502_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEG0434916.1"
                     /translation="STSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCK
                     EYHLKIKDGLDMLLWQGVFAFELFFEIQDKREMIKNAMQQALILK"
BASE COUNT         2104 a         1238 c          745 g         1961 t
ORIGIN      
        1 aaaatcaaat atttcggtat ttttcgaaat tttttctaaa atttttagag ccttaagtaa
       61 atcttgcttt gaaataaaac ctgatttaaa aagatttaaa atacaaattt gagcattttg
      121 catactaaaa atatccactc ttaaatcaat ttttttgcaa agctcttgaa attcttttaa
      181 gagaaaatat ctttcataat tgtctttatt gacacttaaa ataatcgcac actcggctgt
      241 atcaagtttg cttttatctt gaaatttagc atcaaaattt aaaaattgga gttcattttg
      301 ccaaattttt tggaataatt ctttcacaat cttcccctta aaaaggggaa agatttattt
      361 atttctttga gcgacaagtt gtcttctcat ataagcgatt ttactttgta aaggtaattc
      421 tttagggcaa ttatcttcac aagcaagcaa tgacatacaa ccaaaaacac catcatcatc
      481 gcctactaat tcataaaaat cttccacgct tctatggtca tgcggatctt gtaaatatct
      541 agctgttctt aaaagccctg tagcagctat gaaatttggg cgcataagtt tagttgcaca
      601 agaagctaca caaattccac actctataca acgatcaagt tcaaaagttt catccgcaac
      661 ttctggctca atgcgttctt caagtttaga aatatcagtt tctttttcat tatgcaccca
      721 gctttcaaca cgcttacaca tgtcttcaaa ccactcgcct gtattcacgc ttaaatcttt
      781 aatatgccta aatgcaggca taggcataag ctctatcact ccatcaggat aatctttagt
      841 caaagtttta caagcaagtt ttggcactcc attaatcatc attgcacaag atccgcaaat
      901 ccctgcacga caaacaaagt caaaactcag atctgcatcc attttttcac ggatcaaagt
      961 caaacataca aaaaccgtca taaaaggagt ttcttcaagc tcataagtca caaaatgtgg
     1021 tttagaaatt ttgcttaaag gattgtattt aaatgccttt attgtcaatt ttctactcat
     1081 aatcaactcc tattctttgg tttggtgctt tatatttagc ttgcaattca taaggcatta
     1141 aggcgttttg aatttcataa cgacctttgc cttcagcttc cattttttca cggatagcat
     1201 ccacttcagc ttggcgtttt tcacttaaag gattttctat aatatttcct ttagcaccgt
     1261 atccacggaa tgctggtgga atttccattt tcataatatc aagctcttcg tattctatgc
     1321 gtggtaaggt ttcgccttct acccaaaaag tattggttct tttcatccaa tttaaatcat
     1381 ctctttttgg ataatcttcc ctataatgcg ccccacgact ttctgttctt aaaagcgctc
     1441 cataagctac gcaaagtgct atttttaaca ttcttggcac tctatacgct tcttcaagct
     1501 ctggatttgc acaatcaagt tctttacaat gtactttaac gtcttgagaa tctttataaa
     1561 gtttttcaag ttcatctact gcttctttca aaccttcacc tgttctaaag atggccacct
     1621 tatcccacat gatttctttc attctgtttt tgatttcaaa aacattatgt ttaccttctt
     1681 tatctactaa agattttaaa tattgatact ctttagttaa gaagtctttt actacatttg
     1741 tgtcaattac ttcaccatta tttttacaat aatctgcaaa ataatctccc actatcatac
     1801 ctgctacaac agtttcagca catgaatttc cacctaaacg attaaatccg tgcatatccc
     1861 agcaagctgc ttctccacaa gcaaaaagtc cgtttaacca ttgactttca cccgttggtt
     1921 tagttctaat tccacccata gaataatgct gcattggaag aactggcgcc caaccttttg
     1981 gaccctcatc tgctggatca ataccattaa aagttttaca aatatcttgt acatcgcgga
     2041 gatttttttc cacatgagct cttccaagta tagaaatatc aagccataaa tgatccccat
     2101 aagggctttt tacacctttg cctttacgaa tatgttccat cattctacga cttaccacat
     2161 cacggcttgc aagttctttt ttctctggtt cataatcagg cataaaacga tatccatcca
     2221 catcgcgtaa aattccacca tcaccacgac agccctcagt aagcaaaata ccgcttggca
     2281 caataggagt tggatgaaat tgcactgctt ccatatttga aagtctgcaa agccctgttt
     2341 caagagcgat ggctgcacct gttccttcac aaattaccgc atttgtagtt tgtttataaa
     2401 ttctaccata gccccctgtt gctatcatgg ttcctcttgc aatataagca atgagttgtc
     2461 cattagttaa atctctagcg atcacaccta agcatttttt accatcatgg ataattctta
     2521 ctgcttccat tctatcaata atttttactt gatgtttaat agcttcattt gctacaccat
     2581 aaagcataca atgccctgtt gcatctgcga tatagcaagt tctccatttt ttagttccac
     2641 caaaatctct agcattaata agcccgtgcg cttcttcttt ttcttcaatc acagtttttt
     2701 gtgcattgat tacaacagtt cttggacctt tagtaactct agtccaaggc acaccccaag
     2761 ccgcaagctc acgcactgct tttggcgcag tttgagcaaa cattcttgct acttcttgat
     2821 cacagcccca atcacttcct tttactgtat ctgcaaagtg aagatcttca ttatcaccct
     2881 caccttttgc cccatttgct aaacttgcct gcatacctcc ttgcaccgct gcagagtgag
     2941 aacgcttcac tggacaaata cttaaaagtg ttacactttg gccactcttt gctacttcaa
     3001 tagccgctct aagacctgct aatcctccgc ctattactaa agcatcacta tattgtatat
     3061 tcataatttg ctccattgta gttttttatc atcgcagtag tttgggtttg attttggtag
     3121 ttttcataac ctatttttat aaatgctgca agacttaaca cacctaaaac taggaagaaa
     3181 atactgatta tccatttagc agttttaagc tttttgcgac tttcttttac attttttcct
     3241 tcaaaccaac cccatttaac acaaagtcta taaagcccta tacttccatg aagttcaaca
     3301 cagactaaaa gaacagcata aaaaagccac ataaaatgac ttacaaccct atctcctgac
     3361 atatcgccgc tgattttatc tgcattggtt acaataaaaa taagatgagc agaacctaag
     3421 aaaaacataa taaaacctgt aaaagcttga acccaccata acgaagtatc gctgtgattc
     3481 atttttttac tgtgtgttct tagtatttga tactgacggt aattaatagg aaattttctc
     3541 attgcaagta aagcatgaac gaaaaaaacc actaaaacac aggcggctaa aaatgaagta
     3601 agataactca taacaggatt atcgtaaaca aattttaatt ctaaaaaatg taccacagaa
     3661 ttaaaaaaat cctcactgac taaaattgta gaaacaaaaa gcatatgcac ccacataaaa
     3721 agacctaaaa aaagccctga ggcgctttgg ataaagtcta atttcgcagg cattttactt
     3781 tttttgccct caatgctctt acccaaataa ccttcgataa gctcacgcat ctttactcct
     3841 ttgtaaaaag aaattaaaaa aatccatttc attatattac aaaagtcttt aagatagatt
     3901 aaatatttac ttttttaaac tttatacaaa tataaactaa caaagctgtt ataaacatta
     3961 taaaacttaa aatttgcccc atactcatac cccataaaac aaaacctata ccaaaatcag
     4021 gctcgcgata aaattcacat ataaatcttg ccaatgaata agcaccagca tacacaagaa
     4081 tcaattcccc ttgaaaactt tgcttaaatc ttgctaaata aactataata aaaacaacaa
     4141 taccttctaa aaatgcttca taaagttgcg atggatggcg caatactcca tcaacataaa
     4201 ttccccaagg cacatttgta atgcgaccaa aaagctcttg atttaaaaaa tttcctatac
     4261 gaccaaaaac ataagccaat ggaacactta aagcaaccaa atcaagaaaa atccaaggat
     4321 ttgttttata ttttttacaa aacaataaag tagctatcaa aaatcctata attgctccat
     4381 gataactcat acctcgaata cctacaaatt caccattaat ataaggatta aaaatttgcc
     4441 aaggatgagt aatataatac atagtatttg catcataaat caaaatatat ccaagccttg
     4501 cacctaaaat aacccctatt tcaacccata taaaataact atccaaatgt ttttcattaa
     4561 tgtctagttg aaattttctt acaaaaaatt tagccaaaag caaagccaaa agcaaagcta
     4621 taacatacat aatgccatac caatgcacct ttaaaccaaa gatgctaaaa gctataacat
     4681 taaaatttga ataaatatgc tgccaaaatt ccatatatct ttcctaattt tcttttataa
     4741 aaatataaca aaaaaacttt aacttgctat aattaacaca aacacattaa ataaaggtaa
     4801 aaaatgaaaa aatatatttt acttgctagt agtatgttaa ttttagcagc ttgtgggggt
     4861 acaagcagta attttgtcaa tgtttctatg ccaaatttta aaccccaagt tccaacaaag
     4921 gttgaaccta ttgattctgg agtaagcatt gctcttgagc ctattaatat agaacaaaat
     4981 aacaattatt ctgattattt tgaaaattca gtgcttaaaa ttcgcataga aaaagaaatt
     5041 gatcttttaa aacaaaattt agaagagcag atcaaaacca tcgctcaact aaaaggctat
     5101 aaaatagtta ctactaatcc agactacact cttaaaagtt caatcagtat ttatacggaa
     5161 gaaaaaaatg cacaaaaaac aagcaatttt atgagtggag attatgtaaa atccaattta
     5221 ggtataaatt ttaaaggtaa aatagatttt atagatgcac acaatccaca aaattcaact
     5281 aatctttcaa gtaacactaa actagattct ttagttgcgc ttaactatcc tattaaaaat
     5341 gatgatgggg ttaatatgtt taaaactact atctctaccg taccaactca actcaataaa
     5401 ggtttagagc aacctgcttt tgaaattgat aaaagttttt tagcttttta taaaaataca
     5461 ttaaatacac tttataacaa tctaccaaaa gcaacagaca taggcaaaac tatacctaat
     5521 acaaacagtg gttttaatag ttttgatggc gatgctacct ttgaagaaag cttacctcaa
     5581 acaaattcta atcaaaataa tacaattgaa aacacgccta cacaaaatat tcctacaaat
     5641 ccatcttcaa caaatcaaaa taatcaaagt aaaaatcaag atggggtaga aatatttgaa
     5701 tgataaaact tgtgggaaaa ttaaactttc tcacacaaaa aataagattt tcttatacaa
     5761 gaaaaataac tatcattcta ctttaaaatc aatgcctgtt gcattgcatt ttttatcatc
     5821 tctcttttat cttgtatttc aaaaaaaagt tcaaaagcaa aaactccttg ccataaaagc
     5881 atatcaagtc catctttaat ttttaaatga tactctttac acaatctata aaaaggtgtt
     5941 tctctgccat aaattacctc aaaagcaaat ttagctttag gtaaaattct atctaaaagc
     6001 tctctatcac aaggtaaatt ttcatctttt aatccagcag aagttgaa
//
LOCUS       DARATF010000092         6048 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.092, whole genome shotgun sequence.
ACCESSION   DARATF010000092 DARATF010000000
VERSION     DARATF010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.092"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            27..311
                     /gene="gatC"
                     /locus_tag="SB502_001495"
     CDS             27..311
                     /gene="gatC"
                     /locus_tag="SB502_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEG0434917.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIAQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            379..942
                     /locus_tag="SB502_001496"
     CDS             379..942
                     /locus_tag="SB502_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEG0434918.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSAFYKIENQSLAGFAGFLAILIIFWIVCLLVGNFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHANEKLQDIVSDLNNTQKGE"
     gene            944..1417
                     /locus_tag="SB502_001497"
     CDS             944..1417
                     /locus_tag="SB502_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEG0434919.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCSDCNNQKAKVKI"
     gene            1418..2923
                     /gene="lysS"
                     /locus_tag="SB502_001498"
     CDS             1418..2923
                     /gene="lysS"
                     /locus_tag="SB502_001498"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEG0434920.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKTIEFDGKMVNFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            2920..4164
                     /locus_tag="SB502_001499"
     CDS             2920..4164
                     /locus_tag="SB502_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEG0434921.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLILMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDINNEKLQ
                     KNIKQELKKLASNFIIYERAMF"
     gene            4161..4706
                     /locus_tag="SB502_001500"
     CDS             4161..4706
                     /locus_tag="SB502_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HEG0434922.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            4720..5556
                     /locus_tag="SB502_001501"
     CDS             4720..5556
                     /locus_tag="SB502_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEG0434923.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSENTTPQASTPKQEVTQTAKPKEE
                     AKKQTAVKKEKESAKQTPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGGKEITKVLIGPFEKADIAVELAKIRKDIAKDAFSFT
                     LK"
     gene            5553..>6048
                     /locus_tag="SB502_001502"
     CDS             5553..>6048
                     /locus_tag="SB502_001502"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEG0434924.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKKRFKDFLAYPTYLY
                     KNLQD"
BASE COUNT         2210 a          715 c         1138 g         1985 t
ORIGIN      
        1 ttaacttttt tattaaggtt taagaaatgc aaatagatga gaaattatta agcaagcttg
       61 aaaaattaag tgctttacaa ataacaaaaa acagaaatga aactattgca cagttaagtg
      121 aaattgtgaa ttttgttgaa aaattaaacg aacttgattt agattcccaa gagattactg
      181 tgagtactat aaaaggtgga gctcctttga ggattgatga gataagaaat agcaatgtta
      241 ttgatgaggt tttagattgt gctccaaaaa aacaagaaca tttttttgtt gttcctaaaa
      301 tcatagaatg attaacttag catttagtgc ttatttgtag aataaattta aaacaaaaaa
      361 aatcagagag tgattgaaat gaatttttat tggtttgatg cttttatttt aggatttacc
      421 ttgcttttag ggcttaaggg tattatcaat ggtttgataa aagaaatttt tggacttttg
      481 ggtattattg gtggtgtttt tattgcttca aaatatgcaa ctcaagcagc tgaatttata
      541 caaagtgctt tttataagat agaaaatcaa agcttagctg gatttgctgg atttttggcc
      601 atattaatta ttttttggat agtttgttta ttggtgggta attttctttc taagttgatt
      661 aaattaagtg gcctaggttt tttagatcgt attggtggct ttatatttgg tggagcaaaa
      721 atctttttaa tttttgcaat tttggttttt tgtgtagcaa gaatcgattt tttaaatgat
      781 aaattagata attttgctaa aaatagctat actttaaatt tacttaaaga aacgggatct
      841 tttattatga atcaaccttt aacagaaaat agtctagatc atgctaatga aaagttgcaa
      901 gatattgtaa gtgatttaaa caatactcaa aaaggggagt gatatgctga tagagaatgt
      961 ggaatatgat gttttacttg agagatttaa aaaaatatta agacaaggcg gacttaaata
     1021 tactaagcaa agagaagtgc ttttaaaaac tctttatcac agtgatactc attacacacc
     1081 cgaaagttta tatatggaaa tcaaacaagc tgaacctgat ttaaatgtag gaattgcaac
     1141 tgtttatcgt actttaaatt tgcttgaaga agcagaaatg gtaacttcca tttcttttgg
     1201 ttcggcaggt aaaaaatacg agcttgccaa taaacctcac catgatcata tgatatgtaa
     1261 aaattgcgga aaaattatag aatttgaaaa tcctattata gaaagacagc aagccttgat
     1321 tgcaaaagaa catggtttta aacttacagg gcatttgatg cagctttatg gtgtttgtag
     1381 tgattgtaat aatcaaaaag caaaggtaaa aatataaatg tttgataata ttttagagca
     1441 gcaaagaata gaaaaagcta aagagttaaa aaatttaggg attaatcctt atcctcattt
     1501 tttagaaaag gaaatgtctt taaagacttt taaggataaa ttttcttata ttttagagca
     1561 agttgaaaaa agagatgaaa gtgtcaatgc tgttgttgca ggacgtttga aacttttgcg
     1621 tatagctggg aaatcaattt ttgcaaacat tgaagatgag gatacaaatt tacaaattta
     1681 ttttagtaaa gatagcgtag gcgaagagct ttatacgatt ttaaaaaaga atttagaggt
     1741 gggtgatatt gttttggtta aaggttttcc ttttgtaact aaaacaggtg aatttagttt
     1801 gcatgcaagc gaagtaaaac tcgctacaaa agctattgtt cctttacctg aaaaatatca
     1861 tggattaaca gatattgagc aaagatatcg taaacgttat gttgatatga taatgaatgt
     1921 cgaagttaga aaagattttt tagtgcgttc taaagtggtg agtttaatcc gtcatttttt
     1981 tgaaaataaa ggctttttag aagtagaaac tcctatgatg catccgattg caggtggagc
     2041 aaacgctaag ccttttgtaa cttttcataa ttctttaggc gtagaaagat ttttaagaat
     2101 tgctccagaa ctttatctta aaagacttat agtaggtggt tttgaggcgg tttttgaaat
     2161 caatcgttgt tttagaaacg aaggtatgga tttaactcat aatcccgaat ttacaactat
     2221 agaattttat tgggcctatc ataattataa agatttaatg gatttaaccg aagaactttt
     2281 tgctttactt ttggataaac ttaatttagg aaaaacaata gaatttgatg gaaaaatggt
     2341 aaatttttcc aaaccttttg aaagaataac ctataaagac gcactttgta agtatggtgg
     2401 tttagatagg gatttaatcg aagataagga aaaaattctt actaaattaa aagcagatgg
     2461 ttttgaagcg aatgaaaagc ttgaacttgg acatttgcaa gctgaacttt ttgacaatta
     2521 tgtggaagaa aaattgatca atcctacttt tgtgattgat tttcctattt ccataagtcc
     2581 tttatcaaga cgtagcgatg aggattctca gattgctgag agatttgagt tgtttatttg
     2641 tggaagagaa ttggcaaatg gttttaatga acttaatgat cctcttgatc aatatgagag
     2701 atttttaaaa caaattgaag ctaaaaatgc aggcgatgaa gaggcttgcg aaatggatga
     2761 agattttgta aatgctttgg gttatggaat gcctccaacg gcagggcagg gtataggcat
     2821 agatagactt gttatgcttt tgacgaataa aaaatctatt cgagatgtga tattgtttcc
     2881 tgcaatgcgt ccattaaaat cagaactaaa ggagaaagaa tgagtttaga aatgtttgat
     2941 aaagaaattt ttgatttgac aaacaaagag ttagagcgtc aatgtgaagg tcttgaaatg
     3001 atagcgagtg aaaatttcac tttgcctgaa gtaatggaag ttatgggaag tattttgaca
     3061 aacaaatacg cagagggtta tccgggtaaa agatattatg gtggttgtga atttgttgat
     3121 gagattgaaa ctctagctat tgaaagatgt aaaaaacttt ttaattgtaa atttgctaat
     3181 gttcagccta attcaggttc tcaagctaat caaggtgttt atgcggcttt gattaatcca
     3241 ggtgataaaa ttttaggaat ggatttaagt catggtggac atttaactca tggtgcaaaa
     3301 gtaagttctt caggtaaaat gtacgaaagt tgtttttacg gcgtagaact tgatggaaga
     3361 attgattatg aaaaagtaag agaaattgct aaaaaagaaa agccaaaatt aatagtttgt
     3421 ggagctagtg cttatgcaag agtgattgat tttgctaaat ttagagaaat cgctgatgaa
     3481 gtaggcgcct atctttttgc tgatatagca catattgcag gtcttgttgt agcaggcgaa
     3541 catccaagtc cttttccaca cgctcatgta gtaagttcaa ctacgcataa aactttgcgt
     3601 ggcccaagag gtggtattat tatgacaaat gatgaagagc ttgctaaaaa aattaattct
     3661 gccatttttc caggtattca aggtggtcct ttgatgcatg taattgctgc aaaagcagta
     3721 ggatttaaat ttaatcttag cgatgagtgg aaagtctatg caaaacaagt aagaaccaat
     3781 gctcaagttt tagctaatgt tttaatggat agaaaattta aacttgttag cgatggaacg
     3841 gataatcacc ttattttaat gagtttttta gatcgtgaat ttagtggaaa agatgcagat
     3901 ttagctcttg gaaatgcagg tattactgca aataaaaata ccgttccagg agagattaga
     3961 agtcctttta tcacaagtgg attaagactt ggaactccag cccttactgc cagaggtttt
     4021 aaagaaaaag aaatggaaat tgtgtcaaat tatattgcag atattttaga tgatattaat
     4081 aatgaaaaat tacaaaagaa tattaaacaa gaattaaaaa aacttgcaag taattttatt
     4141 atttatgaaa gggctatgtt ttgatttcac caatggatat gtcgctaatt aaaataattg
     4201 gcgatcatta ttatataaga cgcgataaaa ttgtaaataa aattacacat agaggtcgct
     4261 tattttttga taaatttgaa agagttgatg ctcctttaaa tttaaatgtc atgagagaac
     4321 acgctgctaa aaaaattgtt gtcgctcatg atttaataac aaaagataat aaagtagaaa
     4381 atattgtctt tgattataat ggttttaatg ctgaaagatt ttatcaccgt gcacaactta
     4441 ttttaagaga agaaggtttt ataaatttca cagcctataa gactaaaact ccaggacatt
     4501 tacatcttta tattcataaa ggacatacgg cgttaaacga aggttattct ttagcgtcta
     4561 aactttcaat gatgtttgca agtaaaatgc cagtagaatg gaaggtgttt cctagcatgg
     4621 atgtacctag ggaatttaat attttaatat tgccttatga ggtttatcaa aaagaacgag
     4681 gaagttcttg gtctaagcat atgtaagaaa ggacaaatta tggaaaatca aaaaaatgaa
     4741 tttgatgata ttattttaga aaaaagtaat aaaagtgaaa aagtaaaaaa aattctttta
     4801 cgagttattg ctttagttat tttgttttta gctatcatga tagttatgaa gcttattaat
     4861 ggtagtggtg atgaaaatac gcaaaatcaa agtgtattgc caagtgaacc tatagcaact
     4921 caagacaata acaatgatac ttcttttgaa agtatgccaa ttacagataa tacttcagca
     4981 gaagatcaat ttgaggcatt aagaaaacaa tttcaagatg aacaaaatac aactcaaaat
     5041 acaacaacct ctagttcaaa taacaatgat actacaaatt ttgctatgcc tgatcaagaa
     5101 gttccagcag aaccaacagc aactacttca gaaaatacca ctccacaagc aagtactcct
     5161 aaacaagaag taacacaaac tgcaaaacct aaagaagaag caaaaaaaca aacagctgta
     5221 aaaaaagaaa aagaaagtgc aaaacaaacc cctaaaaaag aacaaaatgc aaatgattta
     5281 tttaaaaatg ttgatgctaa acctgtacat ccaagtggtt tagcatcggg tatttatgtg
     5341 caaattttct cagtaagtaa tttggatcaa aaatcaaaag aacttgcttc tgtaaagcaa
     5401 aaaggttatg attataaact ttataaaact acagttggag gtaaagaaat taccaaggtt
     5461 ttaataggac catttgaaaa ggcagatatt gcagtagaac ttgctaaaat ccgtaaggat
     5521 attgcaaaag atgctttttc ttttacttta aaatgaaatt tttagcagtt ataggcgatc
     5581 ctatttctca ctctaaatcg cctagaatgc ataataatgc tattaaagcc ttagggcttg
     5641 atagcattta tacacgctat catttaagaa atgctaactg tttaagagaa gattttttta
     5701 aattaggact tagtggagct aatattactt tgccttttaa ggaaaaagct ttagatattg
     5761 ctgatgtgaa ggatgatttt gctagaaata ttggctctgc aaatacttta tgcttaaaag
     5821 aagataaaat ttacgcttat aatactgatg ctttaggttt tttagaagct attaaggatt
     5881 ttgataatat aaaaaaagct ttgattttgg gtgctggagg tacagctttg gcgcttgctt
     5941 atgcattaaa acaaaaaggc gtagaagtgt atatagctaa tcgtagtaaa aaaagattta
     6001 aagatttttt agcttatcca acttatcttt ataaaaactt gcaagatt
//
LOCUS       DARATF010000093         5958 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.093, whole genome shotgun sequence.
ACCESSION   DARATF010000093 DARATF010000000
VERSION     DARATF010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5958
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.093"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            138..4070
                     /locus_tag="SB502_001503"
     CDS             138..4070
                     /locus_tag="SB502_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434925.1"
                     /translation="MFISSKTELIQTIKNLTINNKEVKQIDFIYPNFSILHAILKNID
                     FHQRKMLSKNQILAMQILEILKQTCDNHNNIEINIHTLNELDAGQNVNLKDLSSSEIC
                     TKVYLEDLEEEIQDKKQGKDFNLFYHTDKNNLCIEFINTLKELAKDSEDITTLDELIE
                     NIDPDDISSEKFDDFKKKVLEKIGNVMESDFFKNSISPTLKNTYEKFINELLEHIKKL
                     AEEKEYEKIKIILSAIAGVAIATVVAVLTGGAGLAILAAGLFSLMGSASEYYEFAQRD
                     YGTLLTPLAAFLATRCAMFIHYINSRLLSCVLIINKKEIIDLSGFGLYLGSDESNIAS
                     NLAYKITLSEEIKSIENIFSEIFLNPEQKNKGYKNTPNDSKSSNLPAFISTQKLSNLY
                     LKNNAILKNLQEDIKQFIYFSYIESPNFNSSKLAEFFAQKNQNAQIDLNTTKMSKNYL
                     IISNIPNKYNAGLSESLTQEIANYNIQDKYRRIKKNIDTSKKTYDSTRDYSEYSIEMP
                     QDENEPYILQLSPFVKISKEAYENSKKAYEDMQKVYKYLTNFVATPQKLPEFAKTAKE
                     KLAISENEPIIEIVKKTENLRHCERINILAYIDYNKKINDKKWLPYFYIKKFFKQNEA
                     KESIIEKEKKIAHQYLTFLKKEFFEKSDKSSFGNYSLMECLFISFVLYQAKLIFPNIN
                     LDLKKYGGSNFVYIKYLDKTYVLWTDECPIYVNNEPTNITAYEVVSQLLKILDKKDYS
                     FVENDSSITIDDFFNELSKDLDTTNTLDKKIIKLKQMYYLDEQKCIKEFMNLDEETQR
                     AFVAWMDIEKQISDLSKLLEQMYGKEYLNKAKEQKTSEIFTYAMLKILLSASPFISFT
                     AQMLWDFNFLKTIEYVIQACIKINKEGFKEFFKEQLSIFAPPKKNSIYHIHIKSNLII
                     KARLQQIEKELIHTKIQMILAQEIKSNLIIQKNTSGLNLFITKIKEYFNEKQIKIYWS
                     DKYMKQLFIYSNQESNISKIALMHSIDIQTQKYTIYTYAKLNKLDLASIVTGEFVGIF
                     LNYLFPTNFKALQEQYESIVYQLYTFKDDSPLAVIRDHFITYPFAINSKFISFDLKKI
                     FYGIDLCTGVFDTHFSFHYEIDQKLEENKEFLLKRLLSYLIIDEKRNATALEDIKEQK
                     YIIDDYTFYFKELKSLELKKCTMYQLPCNHPLFKEFRNKEKQISAFKKDEDSPIHAYN
                     EALQILQDFANGIYNTSKDKTGRYIEDKNKTRRLLEKLNVIGQNNLKAMYMGINGNEE
                     SLKAIGKRENNTSKASANADITSETKTPPNFIGRLATTIIIEDGLYMG"
     gene            4089..5387
                     /locus_tag="SB502_001504"
     CDS             4089..5387
                     /locus_tag="SB502_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434926.1"
                     /translation="MSETYKIYTPNGIAVKVDKETNKIYFVESLDSHPPAKGNYTEEY
                     SKALFEAHNIKRNSPYKDYKPQYLDPEFYTGQSSTLLEFKEWQNIYLKDPIKGAIAPW
                     TKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYEAIGAVDEKGNVDPKYEKLYRI
                     VDDNKHNLRSSLFHNEWGMAAGILGDYKYLANDMFQNGFNARFIQATILYIQLSGGSS
                     ILDKPHLLGAVYGYADIAVGSGLVGVHKNPLREQEIKTLAKTLKPDEFGMLPFIDEIM
                     GVDWVIDYNKYRIARDEFGSMYKALRSDIVEGKIKDPRDIDSTYESRREFDHHRGGYY
                     NGMVNGYGTDTPNDWSEERAQLFNDTLILHAKLAALTPPQGYPNAPYYFTPENLEWYY
                     KRHKLDRLLDPRIPAIYRYNFPQELRAKIRAYAKEHNIKE"
     gene            5410..>5958
                     /locus_tag="SB502_001505"
     CDS             5410..>5958
                     /locus_tag="SB502_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434927.1"
                     /translation="MQKILQIDLEKRKALENFKNLALLGLGGTMLLNLKEQALDFSQE
                     LTYINTYDKYLNLKLDSFYIPSTLLSLLQLTKKSKEAFYINVLINSDTHYKNPLLQYA
                     ITQEQEQENIVFALKNNENLNASFANLNALKLALEEKNFYLNFIDLNSKESLLSFYNQ
                     IISNNHFRNYFYIKNNQFFIKKD"
BASE COUNT         2494 a          728 c          860 g         1876 t
ORIGIN      
        1 tacaacaaat acaaagattt agaagtagag attgatgata agggtaatgt gcttagatgg
       61 ataggagaga ttaatagaga caaaaaatat tagcaaataa aaaatgatat aataatgctt
      121 tatataagga atcttttatg tttataagtt ctaaaacaga gttaattcaa actattaaaa
      181 atttaacaat caacaataaa gaagttaaac agattgattt tatttatcct aatttttcta
      241 ttttacacgc tatattaaaa aatattgatt ttcatcaaag aaaaatgcta tctaaaaatc
      301 aaatattggc tatgcaaata ctagaaattt taaaacaaac ttgtgataat cacaataata
      361 tagaaataaa tatccatacc cttaatgagc ttgatgctgg acaaaatgta aatttaaaag
      421 atttatcaag cagtgaaatt tgcactaaag tttatttaga agacttagaa gaagaaattc
      481 aagacaagaa acaaggtaaa gattttaatc ttttttatca tacagataaa aataatcttt
      541 gtatcgaatt tatcaatact ttaaaagaac tagccaaaga ttctgaagat ataacaacct
      601 tagacgagtt aatcgaaaac attgatcctg atgatataag cagtgagaaa tttgatgatt
      661 ttaagaaaaa agttttagaa aagattggaa atgtcatgga atcggatttt ttcaaaaata
      721 gcataagtcc cactttaaaa aatacttatg aaaaatttat caatgagttg ttagaacaca
      781 ttaaaaaact tgccgaagaa aaagaatatg aaaaaattaa aatcatacta agtgctatag
      841 cgggtgttgc aatagccaca gtggtagctg ttcttacagg tggggcagga ttagctattt
      901 tggctgctgg tttattttct ttaatgggtt ctgcaagcga gtattatgaa tttgctcaaa
      961 gagattatgg cacactttta acgcctttag ccgcattttt agccactaga tgtgctatgt
     1021 ttattcatta tattaattct cgcttgttat cttgtgtttt aattattaat aaaaaagaaa
     1081 ttattgattt aagtggtttt ggattatatc ttggaagtga tgaaagcaat atcgcttcga
     1141 atttggctta taaaatcact ttaagcgaag aaataaaaag cattgaaaat atttttagtg
     1201 aaatcttttt aaacccagaa caaaaaaaca agggatataa aaatacaccc aatgattcaa
     1261 aatcgagcaa tttacccgct ttcatttcaa cgcaaaaatt atctaatttg tatttaaaaa
     1321 acaatgctat tttaaagaat ttgcaagaag atattaaaca atttatttat ttttcctata
     1381 tagaaagtcc aaattttaac tcaagtaaac tagctgaatt tttcgcacaa aaaaatcaaa
     1441 atgcacaaat agatttaaat acaactaaaa tgagtaaaaa ttatttgatt atttcaaata
     1501 tccccaataa atacaatgca ggacttagtg aaagtttaac tcaagaaatc gccaactata
     1561 atatacaaga taaatacaga agaattaaaa aaaatattga tacttcaaaa aaaacttatg
     1621 acagcacaag agattatagc gaatatagca tagaaatgcc acaagatgaa aatgaacctt
     1681 atattttaca attaagccct tttgtgaaaa tatccaaaga agcttatgag aatagtaaaa
     1741 aagcttatga agatatgcaa aaggtttata aatatttaac aaattttgtt gctacaccgc
     1801 agaagctacc agaattcgca aaaacagcta aagaaaaatt agcaatatca gaaaatgagc
     1861 caataataga aatagtaaaa aagacggaaa atttacgaca ttgcgaacga ataaacattt
     1921 tagcttatat tgactacaat aaaaaaataa atgataaaaa atggcttcct tatttttata
     1981 tcaaaaaatt ctttaaacaa aacgaagcca aagaatccat catagaaaaa gaaaaaaaga
     2041 tagctcatca atatttaact tttttgaaaa aagagttttt tgaaaaatcg gataaatctt
     2101 catttgggaa ctattcttta atggaatgtt tattcatttc atttgtcttg tatcaagcta
     2161 agcttatttt tccaaatatc aatttggatt tgaaaaaata tggaggcagt aattttgtat
     2221 atataaaata cttagataaa acttatgttt tatggacaga tgaatgtcca atatatgtaa
     2281 ataatgagcc aacaaatatt acagcatatg aagttgtatc gcaattatta aaaatacttg
     2341 acaaaaaaga ttattctttt gtggaaaatg atagttcgat aactatagat gattttttta
     2401 atgaattatc aaaagattta gatacaacaa atacattaga taaaaaaata atcaaattaa
     2461 agcaaatgta ttatttagat gaacaaaaat gcattaaaga atttatgaat ttagacgaag
     2521 aaacgcaacg agcttttgtt gcatggatgg atatagagaa acaaatatca gatttatcaa
     2581 agcttttgga acagatgtat ggaaaagaat atttaaataa ggcaaaagaa caaaaaacaa
     2641 gtgaaatatt tacttatgca atgttaaaaa ttttattaag cgctagtcct tttatcagct
     2701 ttacagctca aatgttgtgg gattttaatt ttttaaaaac aatagaatat gttattcaag
     2761 cttgtattaa aataaacaaa gaaggattta aagaattttt taaagaacag cttagtattt
     2821 ttgcacctcc aaaaaagaat agtatatatc atatacacat aaaatctaat ttaataataa
     2881 aagcacgctt gcaacaaata gaaaaagaat taattcatac taaaatccaa atgattttag
     2941 cacaagagat aaaatccaat ttaataatac aaaaaaatac atccggttta aatctattta
     3001 tcacaaagat aaaagaatac tttaatgaaa aacaaattaa gatttattgg agtgataaat
     3061 atatgaagca attatttata tactctaatc aagaaagcaa tatatctaaa attgctctta
     3121 tgcatagcat agatatacaa actcaaaaat atactattta tacttatgct aagctaaata
     3181 aacttgacct tgcttctatt gtgactggag aatttgtggg tattttttta aattatctct
     3241 ttccaacaaa ttttaaagcc ctacaagaac aatatgaaag cattgtttat cagctttaca
     3301 cctttaaaga tgattctcct ttagcagtta taagagatca ttttataact tatccttttg
     3361 caatcaattc gaaattcatt agctttgatt taaagaaaat tttttatggc atagatcttt
     3421 gcacaggagt ttttgacact catttttcct ttcattatga aatagatcaa aagcttgaag
     3481 aaaataaaga atttctttta aaaagacttt tgtcttattt gattattgat gagaaaagaa
     3541 atgcaactgc tttagaggat ataaaagaac aaaaatatat tatagatgat tatacttttt
     3601 attttaaaga gttaaaatct ttagaactta aaaaatgcac catgtatcaa cttccttgta
     3661 atcatccttt gtttaaagag tttagaaata aagaaaagca aattagtgct tttaaaaagg
     3721 atgaagatag tcctattcat gcttacaatg aagctttaca aattttacaa gattttgcta
     3781 atggaattta caatacaagc aaagataaaa caggaagata tatagaagat aaaaataaaa
     3841 ccagaagatt actagaaaaa ctcaatgtta taggacaaaa caatcttaag gctatgtata
     3901 tggggataaa tggaaatgaa gaaagcttga aagctatagg caaaagagaa aataacacta
     3961 gcaaagcaag cgcaaatgct gatatcacat cagaaacaaa aactccacct aacttcatag
     4021 gcagattagc tactactata atcatagaag atggtttata tatgggataa attaagaaag
     4081 gataaataat gagtgagact tataaaattt atacacctaa tggaatagct gtaaaagtag
     4141 ataaagaaac aaacaaaata tattttgtag aaagtttaga ttcacatcca ccagcaaagg
     4201 gcaactatac cgaagaatat tccaaagctt tgtttgaagc acacaacatt aaacgaaact
     4261 ccccctacaa agactataaa ccccaatacc tagatcctga attttataca gggcaaagtt
     4321 ctactttact tgaatttaaa gaatggcaaa acatttattt aaaagatcct ataaaaggag
     4381 ctatagctcc ttggactaaa gcagaaaaag cttattataa atctttaaaa actaaaagag
     4441 aaagatataa atatttagca ataagaagtg gattaagatc tgtggttata gatatacctt
     4501 atgaagctat aggagctgta gatgaaaaag gaaatgtaga tcctaaatat gaaaaattat
     4561 atagaatagt agatgataat aaacataatc taagatcaag tttatttcat aatgaatggg
     4621 gtatggcagc aggaatatta ggtgattata aatacctagc taatgatatg tttcaaaatg
     4681 gttttaatgc aagatttata caagctacta tactttatat acaactaagt ggaggaagta
     4741 gtatattaga taaacctcat ttattaggtg ctgtttatgg ttatgcagat attgctgtag
     4801 gaagtggttt agtaggagtg cataaaaatc ctttaagaga acaagagatt aaaaccttag
     4861 ctaagacttt aaaacctgat gaatttggta tgcttccttt tatagatgag attatgggag
     4921 tagattgggt gattgattat aataaatata gaattgctcg cgatgaattt ggaagtatgt
     4981 ataaagcctt aagaagtgat atagttgagg gcaaaataaa agatccaagg gatatagatt
     5041 ctacttatga aagcagaaga gaatttgatc atcatagggg agggtattat aatggcatgg
     5101 taaatggcta tggaacagat acacctaatg attggagtga agaaagagct caacttttta
     5161 atgatacttt aatattacat gccaaattag cagccctcac tcctcctcaa ggctatccta
     5221 atgcacctta ttattttacc cctgaaaatc tagaatggta ttataaaaga cataagcttg
     5281 atagacttct tgatccaaga attcctgcta tatatagata taattttccg caagaacttc
     5341 gagctaagat aagagcttat gctaaagagc ataatataaa agagtaaacc acaaaagaaa
     5401 ggaaaaacaa tgcaaaaaat acttcaaatc gatttagaaa aaagaaaagc tttagagaat
     5461 ttcaaaaatc tagctttatt aggattaggt ggaacaatgc ttttaaattt aaaagaacaa
     5521 gctttggatt ttagtcaaga attaacttat ataaatactt atgataagta tttaaattta
     5581 aagcttgatt ctttttatat cccttctaca cttttatctt tgcttcaatt aactaagaaa
     5641 agcaaagaag ctttttatat caatgtttta atcaatagcg atacacatta taaaaatcct
     5701 ttattacaat atgctattac ccaagaacaa gaacaagaaa atatcgtttt tgctttaaaa
     5761 aataatgaaa atcttaatgc ttcttttgca aatcttaatg ctttaaaatt agccttagaa
     5821 gaaaagaatt tttatcttaa ttttatagac ttaaacagca aagaaagtct tttaagtttt
     5881 tataatcaaa taataagcaa taatcatttt agaaattatt tttatataaa aaataatcaa
     5941 ttttttatta aaaaagat
//
LOCUS       DARATF010000094         5905 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.094, whole genome shotgun sequence.
ACCESSION   DARATF010000094 DARATF010000000
VERSION     DARATF010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5905
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.094"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1495)
                     /locus_tag="SB502_001506"
     CDS             complement(<1..1495)
                     /locus_tag="SB502_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEG0434928.1"
                     /translation="MNLKQISVIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTL
                     NIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKN
                     LELQEDNIIALSRKNLYKGEWIKACGWWPDYVLRIFNKNFTRFNDNLVHESLVLPSNV
                     KKIHLKNGLKHHAFRDISHLINKMQHYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYF
                     LKNGFLYSYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLD
                     SVKNLTFLPNEVLIADDGSKEDTARLIEEYQKNFPCPLKHIWQEDEGFRLSKSRNKTI
                     KNADSEYIIIIDGDMILEKDFIKEHLEFAQRRLFLQGSRVILNEKESEEILNKDDYRI
                     AFNKKDFKSSKNSFLAKMLYSLSKKDEKIFKKTTLIKGIRGCNMSFFKTDFDKLDGFN
                     ENFIGWGREDSEFVARFLFNKGIFRRLKFKAIAYHIYHKENSKKMLES"
     gene            complement(1492..2379)
                     /gene="htrB"
                     /locus_tag="SB502_001507"
     CDS             complement(1492..2379)
                     /gene="htrB"
                     /locus_tag="SB502_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HEG0434929.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARITFYLNKK
                     HRKIIDTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENLLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAIAIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCAENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKAKDSQNASLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNKEIYKDAK"
     gene            complement(2369..3397)
                     /gene="waaC"
                     /locus_tag="SB502_001508"
     CDS             complement(2369..3397)
                     /gene="waaC"
                     /locus_tag="SB502_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEG0434930.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKDKKILKSLKILLKARKNNYNVVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQAKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFSLEELMAFTKMMNLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            3464..4258
                     /locus_tag="SB502_001509"
     CDS             3464..4258
                     /locus_tag="SB502_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEG0434931.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYEDELEKIHEYCESDVLNTYMLFLKYELI
                     KANVSEEDYVDFLSYMRDFLRSKKSDRSYTEVFAKACESEISKVRS"
     gene            4316..5302
                     /gene="galE"
                     /locus_tag="SB502_001510"
     CDS             4316..5302
                     /gene="galE"
                     /locus_tag="SB502_001510"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEG0434932.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKIRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC"
     gene            5296..>5905
                     /gene="pglK"
                     /locus_tag="SB502_001511"
     CDS             5296..>5905
                     /gene="pglK"
                     /locus_tag="SB502_001511"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HEG0434933.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFISFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGVR"
BASE COUNT         1930 a          804 c          908 g         2263 t
ORIGIN      
        1 tgctttcgag catttttttg ctattttctt tgtgataaat atgataagca atagctttaa
       61 attttaagcg tctaaaaatg cctttattaa ataaaaatct agcaacaaat tcactatctt
      121 ctctacccca accaataaaa ttttcattaa aaccatcaag tttatcaaaa tcagttttaa
      181 aaaaactcat attgcaaccc ctaatacctt taataagagt ggttttttta aagatttttt
      241 catctttttt tgaaagactg taaagcattt tagctaaaaa agaattttta gaacttttaa
      301 aatctttttt attaaaagct atacgataat catctttgtt taaaatttct tcgctttctt
      361 tttcatttaa aattactctt gaaccttgta aaaaaagtct tctttgtgca aattctaaat
      421 gttcttttat gaaatctttt tccaaaatca tatcaccatc aataattatt atatattcac
      481 tatcagcgtt ttttatagtt ttgttgcgac ttttactaag cctaaaccct tcatcttctt
      541 gccaaatgtg ttttaaaggg caaggaaaat ttttttgata ttcttcaata agccttgctg
      601 tatcttcttt gctaccatca tctgcgatta aaacttcatt gggtaaaaag gttagatttt
      661 taacactatc aagcactaac ttaaggcgtt ctttttgatt ataggttgtt attattaaag
      721 cacaagtttt tggcttttgc ttttgaagtt catataattt catatattta aaaaaagtcc
      781 ctaaggcatt acaaacgcta attataaaac ccttataact atacaaaaag ccatttttta
      841 aaaaataatt tctaaaaaaa gtccaaaaag ctcttaaatt tgcttttaaa acaccacttt
      901 ttttgtgtat attttgtttt gcccaaaggc ttgagtagtg ctgcatttta ttaattaagt
      961 gagaaatatc tctaaaagca tgatgcttta atccattttt aagatgaatt tttttaacat
     1021 tacttggtaa aacaaggctt tcgtgtacta aattatcatt aaaacgagtg aaatttttat
     1081 taaaaattct taaaacataa tcaggccacc aaccacatgc ctttatccat tcgcctttat
     1141 agagattttt acgactaagt gcgatgatat tatcttcttg aagttctaaa tttttaagct
     1201 ctttaataca ctcattttca agcacttcat cagcatcaat gcttaaaatc caatcatttt
     1261 ttgcataact taaagcaagg ttttttaaag ctccaaaacc tataaaagca ctgtggtaaa
     1321 tgtgcaaatt agcaaaatct tttttaaatt cattagctat atttagggta ttatcactac
     1381 tttcattgtt aagtaaaata atttcatcaa aatcttttaa agaatttaaa cattcaagca
     1441 aggtttgttt tgcatttttt acaatgataa taacacttat ttgctttaga ttcattttgc
     1501 atccttgtaa atttccttat tataacttgc aaagcgtcta tgaaaaaaaa agtattccca
     1561 aggtcttttt ttaatcattt cttcgcaact ttgcgcttga taaagtgtca gttcttctaa
     1621 gcttgcattt tgagaatctt ttgctttaaa aaactctatg caaaatttac catcttcttt
     1681 ataggcataa acagggatga tcaaagcatt gcttctttgt gcgataaggc ttgctcccat
     1741 ttgataattc acttctttgt taaaaaattt taatcttacg ctttcgtttt ctgcgcagtc
     1801 ttgatcggtt aaaattccta aagttctccc tttttttaga gcgcttagca tttgtcttat
     1861 gccgcctttt ttgtcgataa gttctatgtc aaattgggtg cgactttggc ttaaaatttc
     1921 atacataatt tcacttttta actttttccc tactatagca atcgcaccat atttagccgc
     1981 ataagcaagg cttaaaattt cccagtttcc atagtgtgca gttgtgaaga taataggacg
     2041 atttaaagct agagcgtcta taagtaaatt ttcattgatg aaatttactt tattgagaat
     2101 tttttctttg gtggtgtttt gattttgcaa acaatcaatt ccaaattgag caaaattttc
     2161 ataaattttc aaagacaatt tatcgcgttc tttttgagtg tattgaggga agcagatttg
     2221 caaatttgta tcgatgattt tgcgatgttt tttgttaaga taaaaagtga ttcttgctac
     2281 aattaaagct aaaaaatgca agatacactc aggcataaaa gtaacaaaaa atttcaaaat
     2341 ataataaaga ctaagatata ttctatcact atttttcatt aagtaagcct ttggcaagtt
     2401 tgaagatatc ttcttcttct atacgcgtga tacaaaaatc acttttatcg atatgcttgg
     2461 cattttggat ttttttacct gcatcaatga ttttattgat atgagtttga aaagcattgc
     2521 ggtagcttgg tgttgcacca aaaatcgtaa tagatgcttt atttaaagca aaagccaaat
     2581 gtgttggacc actatcattt cctatgataa gattcatcat ttttgtaaaa gccattagct
     2641 cttcaaggct gaattttggt gctaattcta tatgtgtttc atcaatacca ctaagattta
     2701 aaacctcttt ggcaaattcg tattctttta catttcccca agcgagccaa atttttgctt
     2761 gttgaaattc attgattaaa agtttgcaaa gtatagcaag tttggtttta ggatagattt
     2821 tattttctac acttgaaccc acgtgtatga gtatgttttt ttcgtttttg tcgagcttga
     2881 gtttattgtt taagagttgt tttaaatttt catctacgct aaaaatatct tgtttaaagg
     2941 ctaaattttt gacattaaaa tcagtattta acataaagga ggtaagactt aagtatctta
     3001 caaatacatt ttcattgtaa tctaactcaa gtttttggtt gtagaaatta tgagcaaaac
     3061 tttctttaag actattttta tcaaaaccaa aattatttct acttaaaatt cgacttacaa
     3121 tagcagattt tataagccct tgtagatcta ttactacatt atagttgttt tttcttgctt
     3181 taagaagaat ttttaggctt tttaaaattt ttttgtcttt taagggcagg gcatagagtt
     3241 tgtctattaa aggatggttt ttaagtatgc cttcaaattt ttcatctaca aaccaatgaa
     3301 tttctatatc ttttttaaaa tttttgataa attgcaaaac cacggcactt tggataatat
     3361 caccaagtgc tgacaaacga acaattgcta ttttcattaa aagcctaata ttttaaaatt
     3421 tttgctatga ttttagcgaa attatttaaa aaaaggttaa aaaatggcaa aaaatgaagg
     3481 ttatatttgt gtttttgatt gtgagagtgt gccagatgtt gagcttatcc gcaaaacttt
     3541 aggttttgaa ggaagtgatt tggaggtaag tttaaaagca cttcagtggc aaaaagaaca
     3601 aagcgggagt gagtttttgc ctttgcctta tcataaaatc atcagtattt gtgcggtttt
     3661 aagcgataat tttggaaaat ttatcaaagt aaataaaatt gatgggcaaa atgaaaaaga
     3721 aatgattgag aattttttca attttataga aaattatgag ccaaaattag tcagttttaa
     3781 tggtaaaaat tttgatatgc ctgttcttgt tttaagggct ttaaaataca atttaaaagc
     3841 agcaacttat ttagatactc aaagtgataa atggaataat tataaaacaa gattttcaga
     3901 attaaaacat tgtgatttat tagaatcctt aggatctaat gggcgtggaa taaagcttga
     3961 tacactttgc tctatggtgg gtttgccagg aaaatacgat gtgcatggtg atgaggtgat
     4021 gaaacttttt tatgaagatg aacttgaaaa aatccacgaa tattgtgaaa gtgatgtttt
     4081 aaacacctat atgctttttt taaaatatga acttattaaa gctaatgtta gtgaagaaga
     4141 ttatgttgat tttctttctt atatgagaga ttttttgcgt tcaaaaaaat cagatcgttc
     4201 ttatacagaa gtttttgcaa aagcttgtga gagtgaaatt tcaaaagttc gatcttaagt
     4261 atttaagaaa atatattaaa atttattttt gacattttca aaaaaaggaa tgatgatgaa
     4321 aattcttatt agcggtggtg caggttatat aggttctcat actttaagac aatttttaaa
     4381 aacagatcat gaaatttgtg ttttagataa tctttctaag ggttctaaaa tcgcaataga
     4441 agatttgcaa aaaataagag cttttaaatt ttttgaacaa gatttaagtg attttcaagg
     4501 cgtaaaagca ttgtttgaga gagaaaaatt tgacgctatt gtgcattttg cagcgagcat
     4561 tgaagttttt gaaagtatgc aaaatccttt aaaatattat atgaacaaca ctgttaatac
     4621 aacaaatctc atcgaaactt gtttgcaaac tggagtgaat aaatttatat tttcttcaac
     4681 ggcggccact tatggcgaac cacaaactcc cgttgtgagc gaaacaagtc ctttagcacc
     4741 tattaatcct tatgggcgta gtaagcttat gagtgaagaa gttttgcgtg atgcaagtat
     4801 ggcaaatcct gaatttaagc attgtatttt aagatatttt aatgttgcag gtgcttgtat
     4861 ggattatact ttaggacaac gctatccaaa agcgactttg cttataaaag ttgcagctga
     4921 atgtgccgca ggaaaacgtg ataaactttt catatttggc gatgattatg atacgaaaga
     4981 tggcacttgc ataagagatt ttatccatgt ggatgatatt tcaagtgcgc atttagcggc
     5041 tttggattat ttacaagaga atgaaagcaa tgtttttaat gtaggttatg gacatggttt
     5101 tagcgtaaaa gaagtgattg aagcgatgaa aaaagttagc ggagtggatt ttaaagtaga
     5161 acttgcccca cgccgtgcgg gtgatcctag tgtattgatt tctgatgcaa gtaaaatcag
     5221 aaatcttact tcttggcagc ctaaatatga tgatttagag cttatttgta aatctgcttt
     5281 tgattgggaa aaacagtgtt aaaaaaactt ttttttattt taagtaagga agataaaaat
     5341 tttttatttt tcttgcttgt tttttcagta tttatttctt ttatagaaac ttttgcaatt
     5401 tctttggtaa tgccttttat cactttggct agtgattttt cttattttga tcgtaataaa
     5461 tatttaatca gcctaaaaga atatcttaat atccctgttt ttgaaatcat tgtttatttt
     5521 ggagtggggc ttattgtttt ttatgtgttt agagctttgt taaatgcgta ttattttcat
     5581 cttttggcaa gattttctaa agggcgttat catgcgatcg cttataaggt tttttctaaa
     5641 tttttaaata ttaattatga aaaatttact caaaaaaatc aatctgaaat tttaaagtcc
     5701 attacagggg aagtttataa tctaagcact atgatttcat catttttact tttgatgagt
     5761 gaaatttttg tagtactttt gctttatgct ttaatgcttt tgattaatta taaaatcact
     5821 ttatttttaa gtatttttat ggtgttaaat gcctttattt tagtgaaaat tttaagccct
     5881 atcattaaaa aagcaggagt aagac
//
LOCUS       DARATF010000095         5888 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.095, whole genome shotgun sequence.
ACCESSION   DARATF010000095 DARATF010000000
VERSION     DARATF010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5888
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.095"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..712
                     /locus_tag="SB502_001512"
     CDS             <1..712
                     /locus_tag="SB502_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEG0434934.1"
                     /translation="QHELIFEITNLANDLALNIQDNNTQHKNDLKQILVKLFQYIKIH
                     FKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSNDIVKMSQELSILTKDWILDH
                     FANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRAEKTHDYICNCSLRIHAVP
                     QTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNAIFEDALQNHHFTTQKNDM
                     GGGIDEFSSKNLRNFQSF"
     gene            669..2540
                     /locus_tag="SB502_001513"
     CDS             669..2540
                     /locus_tag="SB502_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEG0434935.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPSAIEMKFSNLY
                     HDIIKKYNHLSISYKKLVKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(2544..4181)
                     /locus_tag="SB502_001514"
     CDS             complement(2544..4181)
                     /locus_tag="SB502_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEG0434936.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKQGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(4185..5069)
                     /locus_tag="SB502_001515"
     CDS             complement(4185..5069)
                     /locus_tag="SB502_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HEG0434937.1"
                     /translation="MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            complement(5122..>5888)
                     /locus_tag="SB502_001516"
     CDS             complement(5122..>5888)
                     /locus_tag="SB502_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0434938.1"
                     /translation="DQNLNLDKNLNKEIVKDTQNLVSNLTQKDFNLNKESKNNNKENK
                     DIKQNFFDQKLNFENLNKTQVVQNKENNANFNNNTTNKETFTQEQTKTHSENVDKNSL
                     DELNSLVKDLNKVTQNNARNITPKETLQHFSQDLKEAVDQYKAPITKLSITLNPNNLG
                     EVEVTLIQRGNNLHINFNSNTNAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQ
                     NQNQGKNRSGYGFKDALDGKNESEKVNLELVLAKYF"
BASE COUNT         2108 a          977 c          782 g         2021 t
ORIGIN      
        1 acaacacgaa ctaatttttg aaattaccaa tcttgcaaat gatttagctc taaacattca
       61 agataataat acacaacaca aaaatgattt aaaacaaatt cttgtaaagc tatttcaata
      121 catcaaaatt cattttaaag atgaagaaaa atttatggaa agcattgatt ttcctttaat
      181 tgaagaacat aaaaaatctc atcaaatatt agtagaaaaa actaaagagc ttttagaaca
      241 ctcaaatgat attgtaaaaa tgtctcaaga actttccata ttaaccaaag attggatttt
      301 agatcatttt gctaatgaag atttatggat agctaatttt acaaaaaaaa ccctacacct
      361 tcaagaaatc cattatacct tagaacaata cataaaacta aaatcaatca aacaagacct
      421 aagagctgaa aaaactcatg attatatttg caattgttct ttgcgtatcc atgcagttcc
      481 acagactata catcaagagc ttgttagcaa agaaaatacc ttaaagtgcg aaaaatgtgg
      541 gcaaatttta gttcatttgg attattttga tttgaatcaa aatttcgaaa aattcaatgc
      601 tatttttgaa gatgcactac aaaatcacca tttcacgact caaaaaaatg atatgggggg
      661 ggggatagat gaattttcaa gtaaaaacct tagaaacttt caatcctttt gaaagtttaa
      721 atcatgaaca agcaaacaca gaacaaattc ttgattttag agttatagat tttaaacttc
      781 tgtgttctag tgtaaaacca gcaaaaacaa aaacttatga aagaaaggat tttgacttat
      841 tttatgcaga tgattttttt gtaaaaaact acaataccat agtgcaaaaa tttcttatag
      901 aaatttaccc aaaaacccaa agttttcctt ttacagtcaa acttagatcc aactccaacc
      961 taacccatct aaaagccagt atcaacctta cagaaaattt taaatattat cctaatttaa
     1021 aatttgatat tttgcaaaat atctacaaaa taatgatcaa acaaaaattt ttaatcttaa
     1081 gacttgataa aaatttattt gacaagattg atgattttat cttatcaata caaaaaagtc
     1141 catctattaa agaaatagag cttgaaattg ccaaaggtgt agataagatt gaacataaaa
     1201 gtgatgaaat tatttatcat agagatgtta acgaagaatg ttttgacgaa aatattaact
     1261 atgatgaagg aaactactgt aaacctattg aaaaaaatga gctacttttt gaatacattt
     1321 atagaattct tggaaaagaa ggacgaaatt taagaggaga gatacttcat ttaaatccaa
     1381 tagcctttct tgataatcct tttatcataa aagatgaaag catttacaca gaagaattag
     1441 aagatagaat taaatatttt agtgccaatt atggattttt aaacaaagat catacaggat
     1501 attgtatcgc aaataattta aaattatcac aaatagggct taaaacaacc ggttcaatca
     1561 aaacaaatac cgatgaaaat ataaacttag aaatcactaa ttttgatata agtgatgatg
     1621 ctattaaatc aggtattgta aatgttcaag cttcaaatat aaaagtaaat gggaatgttg
     1681 gagcaacaaa actttatgga aaaaatatca gtatcaaagg cttaactcat gcaaaaagcg
     1741 aaatttttgc acaagatatt tttattacaa cacacaaagg aactttgcaa gctgacactg
     1801 tatatataaa aaatttagaa aatgggacaa ttatagctaa aaatgtattt gttgaaaact
     1861 gcatgggtgg aaaaatagaa gcagaaaata tttatatttg caatttacta acggataata
     1921 ctttatatcc aagaaaaaat ctaatcataa caaacaatat aaaatttaaa aacaatatcg
     1981 tagtttcacc actagtttct attgaaaaca actcagatac agaatgcgaa aatcttaaaa
     2041 atctaagcct taaaataaaa agtaagcttg atgacaccat aagcaaaatg caaaattact
     2101 atgattatct aatcaaaaat caaatcaaaa tcatcaaact tcaaaagact aaaaatccta
     2161 gcgccataga aatgaaattt tcaaatcttt atcacgatat cataaaaaaa tacaatcatc
     2221 ttagcatttc gtataaaaaa cttgtaaaat taaaatatca aattgatgca aaattaaatt
     2281 tcttaaatga aatggtttac aatgtaaaaa tatacataaa agccgaaaat atcggagagg
     2341 ataatttttt aaaattttat cctaacacaa acaccaacct tgaactaaaa catcatataa
     2401 atttaaaaga ctatgaaaag gttttatatc ttgaaaaagg acagcaagta agttatatta
     2461 aatcaagcca taattatagc gaaagcgaca tagaagaaat taaaattatt tttgaaaaat
     2521 tagaaaaaga taattcctaa gaattatctt ttcatattaa tggctttttg tatcatctga
     2581 tcacttgtag tgatactttt tgagcttgca tcaaaagctt tttgagttac gataaggttt
     2641 gaaagctctg cgcttaaatc aacatttgat tgttctaaga atccgccttt aaatttagct
     2701 gtattaacaa cttgaccatc tttcataata aaacttgcat caccgctatt tgccgttgct
     2761 gcaaaaatat tatctcccat agcaactaat ccttgctcat tgataaaatt atataaagca
     2821 agctttccaa ctatagcatt tttaccattg ctaaattgcg caacaatact tccatcatcg
     2881 gatatattat attgttcaaa aaacccttca gctacaccat cttgttgtgt aactacattt
     2941 ttttcgacgc cttgtttaat ataaatccca ctataacccg aaccaggctt gttagcatca
     3001 taaggagaac ctaaatcaat attaattgtt ccaccatttg gatttgcaat gcttgtaata
     3061 ttgttttgaa gcaaagcacc atttttatca aaaaccatat ttccttcagt cggattgcct
     3121 acggcattgc cattagaatc ataaatttgt gcaatagctt tatattgtat attatcgcct
     3181 tcttgcggta aaactctttc aagtgtaacc cttaaagtgc ttttacttcc atctgcatta
     3241 taaatagggg attctaaaat atctttattg gctttttgtt gctctgttga aatttgagct
     3301 gtatcaagct tgatgctatt ttcatccaat ccttttaaat caagctcgtt acttttaaaa
     3361 tttagatttt catctaaagt cgcttcaaag cttgttttta cgccattatc atcagtgaaa
     3421 tttaaaataa tcctatcacc cgctttagca ctaaacacat cttctttgct aacactacca
     3481 ctaactacat attttccatc ttcagttttt gtaatgttaa atttactagg atcaagatct
     3541 actttaacta cttctgttgt tgtgttagta tttaaacttc cactccattt tacattttga
     3601 gttacttgag gaggtaaata catattcaca ggtactttaa tagccccttg agaagcggtt
     3661 gtgcctatac tgaaagaatt atttgaattt acagtaaaac cattatttac cggagttcct
     3721 gtgttaagat aatcccccat aagcccagca actctatcgc tatagttaat accagtaaaa
     3781 gcaggattca ttgttcctaa aacaaaattt ccataagaat ctaccaaata tccattggca
     3841 tctcttctaa atgatccatt tctagtatag taagcattgc catcagcccc taaaacccca
     3901 aaaaatcctt ttccttgcaa agccacatca aattcgccat cacttgcaac aggagaaccc
     3961 tgttcgaaaa caacttgaga agatgctgca ccgctaccat aaccaccttg agcagggttg
     4021 gttgattggg ttgttatggt agtataaaaa atatctttaa attgagcatc agagtattta
     4081 aagcccgtgg tattgacatt tgctatgtta ttagcagtga tatcaatacc aaagctattg
     4141 ctttttactc cagaaatccc attataaaat gaattcatca tggcttatgc cttttcctct
     4201 ttgtcgccat cttctgtaga tccagaccca gaagaatctc catcgcttga accaccactt
     4261 gagtctccac ttgaaccgct tcctccagta gatgaagatg aaccaagctt ataatctgtt
     4321 atttcttgta ttgcatcaaa aggaacttct tgtccagcca tttttgcata ggcaacacca
     4381 tctttaaaaa caacaccttc gataggataa gttccgtaat ttgcagtgat tttttcacca
     4441 tttttattat tataaaccat tttaacagtg tactcaccat cacctgcata aaccccatcg
     4501 ttatttcttc ctggccactc catagtaaat aaaccttgag aaatagattt agcatcgctt
     4561 ttttcactga aaacaagttt attattgcta tcataaattt ctagcgtaac accgttttca
     4621 tcagaatctt caggcaaata cattttaaga gcgataagct catctgcacc tgtaagtttg
     4681 attttattat ctgaaacagt tgccatttta ccaatagccc ctaaagctga agtactcata
     4741 cttgtactaa aagaatcaga aagcttttgc atagtttcaa ccattttttg catagttgta
     4801 ttggtatttt gctgcatttc aagtgcgcta agctgcgaag tttgagtaag cattttatcg
     4861 ctatccatag gatctgttgg atcttgatgt tgaagctcta tcaaaagaag ttttaaaaac
     4921 gcatccttat ctaaggtagc gtttggattg ctcactattc ctgagctact gcttgaatct
     4981 gttctagttg ttccactagt acttcctgaa gaagtagtac ctgaagttgt agcagtggta
     5041 tttaaattcc aatccgatga tgatatcatt ataaactcct ttttatttag ttttttatta
     5101 tttaagcaat aagtgttcca attaaaaata cttcgctaaa acaagctcta gattgacttt
     5161 ttcactttca ttttttccat ctaaagcatc tttaaaacca tatccactac gattttttcc
     5221 ttgattttga ttttgctctc ttttaccttg atcactaaaa ttcatttcaa gtccagtaaa
     5281 tcccatattt acaagagaat ttttaaactc ggcttgattt tggataaaca aattcattgc
     5341 attggtattg gagttgaaat tgatatgaag gttattgcct ctttgtatca aagttacctc
     5401 cacttctcca agattattag gatttagagt gatgctaagt ttagtaatag gcgctttata
     5461 ttgatctaca gcctctttta aatcttgtga aaaatgttgc aaagtctctt taggagtgat
     5521 attgcgagca ttgttttgtg ttactttatt taagtctttg actaaagaat ttaactcatc
     5581 taaactattt ttatctacat tttcactgtg cgtttttgtt tgctcttgag taaaagtttc
     5641 tttattagta gtattgttat taaaatttgc attattctct ttgttttgaa ctacttgagt
     5701 tttatttaaa ttttcaaaat ttaatttttg atcaaagaaa ttttgtttta tatctttatt
     5761 ttctttgttg ttgtttttag actctttatt tagattaaaa tctttttgtg ttaaattgga
     5821 aactaaattc tgagtatctt taacaatttc tttatttaaa tttttatcaa gatttaaatt
     5881 ttgatcat
//
LOCUS       DARATF010000096         5793 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.096, whole genome shotgun sequence.
ACCESSION   DARATF010000096 DARATF010000000
VERSION     DARATF010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5793
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.096"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..738)
                     /locus_tag="SB502_001517"
     CDS             complement(<1..738)
                     /locus_tag="SB502_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEG0434939.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVQFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFL"
     gene            complement(773..2767)
                     /locus_tag="SB502_001518"
     CDS             complement(773..2767)
                     /locus_tag="SB502_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEG0434940.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKENSENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(2736..3536)
                     /gene="rsmA"
                     /locus_tag="SB502_001519"
     CDS             complement(2736..3536)
                     /gene="rsmA"
                     /locus_tag="SB502_001519"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEG0434941.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KILFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDLYLKIYDKLKDEYGRKQRDK"
     gene            3616..4152
                     /locus_tag="SB502_001520"
     CDS             3616..4152
                     /locus_tag="SB502_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEG0434942.1"
                     /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLSQLYFKEKPSKLIFIG
                     TCGLYDKGEILEIYRSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     HQKAKEKLEEYLKKYHYI"
     gene            4176..5246
                     /gene="rlmN"
                     /locus_tag="SB502_001521"
     CDS             4176..5246
                     /gene="rlmN"
                     /locus_tag="SB502_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEG0434943.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     NLPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELVDGLRIESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNEGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDELRTELMSINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGGLYKRPSLENAIKFQDLLSNKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            5243..5341
                     /locus_tag="SB502_001522"
     CDS             5243..5341
                     /locus_tag="SB502_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434944.1"
                     /translation="MTMLDIFEIIFITAVVIIGFGGIVFVVTKEKK"
     gene            complement(5355..5431)
                     /locus_tag="SB502_001523"
     tRNA            complement(5355..5431)
                     /locus_tag="SB502_001523"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5395..5397),aa:Met,seq:cat)
     gene            5566..5653
                     /locus_tag="SB502_001524"
     tRNA            5566..5653
                     /locus_tag="SB502_001524"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5600..5602,aa:Ser,seq:gga)
BASE COUNT         1821 a          932 c          930 g         2110 t
ORIGIN      
        1 caaaaaatct cttaattttt catattctcc attttccaaa tagcgatgtt ttcccgcctt
       61 taacatacca agatctaaag ccccaaaagc aacacgctta agatccatga cttcaagatc
      121 aaaatgtcca aaaaagcgtc taagctctct atttttacct tcatttataa ccactctaag
      181 cttagtataa cctccacttg atccaaaaat ttcaaagtct ataaaaggag caaaactcat
      241 agaggtgatt ttggtttttg cgtgtgcgcc ttttttttca tttttaatct caagcccatt
      301 ttgcatggct tcgatgactt gtttgctcac cgtaccttta actttaaggt agtattctct
      361 ttctaaatcg ctatgcatta aagcatcagc aatcacagga gaatctgtaa gcaaaagcaa
      421 gccctcgctt gcataatcca gcctacctac gctaagccaa gtactaaatt gtcttggcaa
      481 ggtatcgtat atagtttttc ttccacgatc gtctttttta ctgacaattt cacctttttg
      541 tttatggtag attatcacgc taaattgcgt tcttttttgc actcttttgc ccttaacaaa
      601 gactttatca tcaaattgaa cttcatcgct taaaagggca attttgttgt ttatttttac
      661 taagccttgt ttgataagtt catcagcttc acggcgtgaa taacgagtgt tatgggatat
      721 aaatttatta attctcattt gatcttcctt aaaagggcgt ttttgccctt ttttacatta
      781 caaaaatagt tggaactatg gttgggtatt ttttaatctt tctaaagata tgttttctta
      841 agacttggcg gatttgattt tctaaaaatc ttggatcatt gagtacttca tctttaacat
      901 tgatgaaaaa ttgtcctaaa acttcagcca tatctttgct aaaagcatga tcgtgtttgt
      961 cagctactaa cccatagcta aatactcttg gtttattgat cagtgttttt gtggctttgt
     1021 caatttgtgc gataataacc actatgccac tatctgcaag tttttggcga tctataacta
     1081 catcatcggc gatttgtttg ttgatttgat tatctacaaa aactttacct gtttttacgg
     1141 tttttatgcg tttgacatat ttttggcaaa gttctacttg atcgccatca ctcataagat
     1201 aaatatttct ttcagggata ccgcacttca tcgctgtttc tttgtgttta gtgatgtgat
     1261 tgtattctcc atgaaccggt aagaaaaatt taggtttggt aagggttagc ataagttttt
     1321 gctcttctat actagcgtgt ccgcttacat gaatttcact aaattcttga tacgctactt
     1381 tagctcctgc ttttaaaaga tagtcaagca ccgcagaaac acttgcttca tttcctggta
     1441 tggctttagc tgaaataatc acttgatctg taggtttgat ttttataaat ttatgctcat
     1501 cagttgccat tctataaagc gcactcatgg tttcgccttg acttcctgta gttacgataa
     1561 gcacttcatt gtctttatat ttgcttactt catcagcatc gatgaaaatt tttctatcaa
     1621 gtttgatgta gcctaattcc atagtggtat aaagatttct ttccatagaa cgaccgatca
     1681 cacaaacttt tctgccgtat tttaaaccat aagtgatagc ctgataaaca cggtggatat
     1741 tagaactaaa agtactcatg atcaccctgc ctttggtacg tgcaaaaatt tgatcaaaag
     1801 ttggccctac agagctttca ctttttgtat aaccttcttt gtacgaattt gtactatcgc
     1861 ttaaaagaca taaaacccct tcttctccat aatgtgccaa acgtcctaag tctgttggat
     1921 agccatcgat tggggtttga tcaattttaa aatcacctgt gtggataata gttcctgctt
     1981 ttgttttgat cgcaagtgct gaagcatcaa tgatagaatg tgtgatatga atccactcta
     2041 tatcaaattc gcctatctca taaacacggc gtttttctac agggcgaaac catttgcgtt
     2101 ctgcttttaa gccatgttct tcaaatttgt ttgaaatcat tcctaaagcc aaaggtgtag
     2161 cgtagatagg aaattggaat tctttaaaga aataaggcac tgcaccgata tgatcttcgt
     2221 gtgcatgagt gatcactata ccacgaattt tatctttaat ttttcttaca tagtcaaaat
     2281 cagggatgat aatatctacc ccatgcatag ttccatcagg aaaactcata cctatatcta
     2341 ctataattgc atctttattg gtttcaaaaa cactgatatt tccaccaatt tctcctaaac
     2401 ctcctaaagg agtgatgcgg attttatgct cgctagaatt attatatttt aaagggtgta
     2461 agcggttttc atgtgaaaca cggttagctt ctatgcattc tgcaagagcg atttgccaat
     2521 cttcattacc tgtgagtttt gaaggaagat tgcgattttt cttctttttt ttctcagttt
     2581 tattttctga gttttcagaa ttttccttgt tggaattttg atcaattttt ggagtatcat
     2641 tttcattttg caaagaatca gctaattttt ttctacgatt tttatattta tagcgtttat
     2701 tgttttttga atttgagttc ggattttgtt cgtttttatt tatctctttg ttttcgtcca
     2761 tattcatcct ttaatttgtc ataaatttta aggtataaat caacgcaaat ttcatgtggt
     2821 ctgatgtttt cttttaagcc aagagtgctt aaaacttcta aaacttttgc tttatatgtt
     2881 tttaaatttc ctaagagttg ttttctagga gctttaaaac aatcttttag aaaatttttg
     2941 aaattttcta tttcgcaaag ttcatcaaaa tccttagttt taatcaaact catcaccgct
     3001 gacataactt ttggtggagg attaaaacat tgtggatcaa catcaaaaag tatttttctt
     3061 tcgcaaatca ttgcacttaa aacacctaag gaagaaaact cactatttcc ttctttagcg
     3121 cagaattttt cagccatttc cctttgtacc attacaataa gccctagaca atttttatct
     3181 tctaaagctt ttaatataat gtgacttgca acataataag gcaaatttgc aaccaaaaaa
     3241 tatggttttt catcaagact aggattaaaa gcttcgcttg cgtcttgatg gatcaagtta
     3301 aattttccac attcaagttc tttttgaaat ttctttttta aaataggtat gagatcatta
     3361 tcgatttcat aagcttttac ttgagaaatt tttaaaagtt cttgcgttaa atcacctaag
     3421 ccaggcccaa tctcaatgat attgttcatc tctttgggta tggcttggat gatttttgct
     3481 aatacgcttt tatcgattaa aaaattttgt ccgtattgtt tttttgcttt aaccataaga
     3541 aataatttta tctaaaaatt cttaattaag tctttttagg tagaattatt tttgtaaaat
     3601 ttcataagga tcaaaatgat tgtttgtgcg ggtggaaatg aaaatttttc ttttgcaaaa
     3661 gctataggca taggtttggt tgagtcagct tttcatttga gtcaacttta cttcaaagaa
     3721 aaaccatcaa aacttatatt tataggaact tgtgggcttt atgataaggg agagatttta
     3781 gaaatttata gaagttcgca cgcttttaat gtagaatttt ctaaaatttc acatgcattt
     3841 tatactcctg caaaatatga aatttgctta gaaaaagaaa atgtttctcg tgaaacaata
     3901 aaaatcaatt cttcaaatta tatttgtcaa aattcaaaag cagcaaaaga attttcaaaa
     3961 ttaggttttt ttgcagaaaa tatggaagcc ttttctgttt tgagcgtagc taaaaattta
     4021 aatattgatg cagagtgtat tttgtgtgca acaaattttt gcaatgaaaa cgctcacgaa
     4081 gattttataa aaaatcatca aaaggcaaaa gaaaaattag aagaatactt aaaaaaatat
     4141 cattatattt aaaaattcaa aaaaggaaaa taattttgaa agagcttgtt aatattttag
     4201 attttttacc tgaagaatta ggagaaaaaa tcaaaccgat gtttcgcgtg aaacaaattt
     4261 atcaatggat ttatcaaaaa tacgccaata atttttccga tatgtcaaat ttaccaaaag
     4321 atctacgttt agaacttgcg caaaattttc atttctctcc cgtaaaatgt gttaaaaatg
     4381 agcaaagtaa agatggaagt ataaaatatc tttttgaact cgttgatggt ttaaggatag
     4441 aaagtgtgct tttgcctatg aaagaagaaa aaatagacgc agaaggcaaa agaatttctc
     4501 atgcgagata tactatctgt gtttcttctc aagtaggttg taaaagtgga tgtagttttt
     4561 gtcttactgc caagggtggt ttgaaaagaa atttaagtgc aggtgagata gtcggacaaa
     4621 ttttatggat caaaaaacaa aacaatatcc cttatgaacg ccgtgtaaat atagtatata
     4681 tgggtatggg cgagcctttg gataatctta aaaatgtttc taaagcggta aaaattttag
     4741 cgcaaaatga gggacttgct ataagtcctc gccgtcaaac catcagtact agcggtttgg
     4801 caaaacaaat caaagaatta ggtcaaatga atttaggtgt tttacttgct atatcattgc
     4861 atgcggttaa tgatgagctt cgaaccgaac ttatgtctat caataaagct tataatatcg
     4921 ctgcgattat ggatgcggtg cgtgaatttc ctatagatca aagaaaaaga gtgatgtttg
     4981 aatatctttt aattgatggt atcaatgata agcttgaaca cgctaaagaa ttagtcaagc
     5041 ttttaaatgg tattaaagcc aaagtgaatt taatactctt taatccacat gaaggaggtt
     5101 tatataaacg ccctagttta gaaaacgcga ttaaatttca agatttactc agcaataaag
     5161 gtgtaacttg tactataaga gaaagtaaag ggcttgatat ctcagctgct tgtggacagc
     5221 ttaaagaaag ggcaaaagaa caatgacaat gctagatatt tttgaaatca tttttataac
     5281 agctgttgta attataggtt ttggtggaat tgtttttgta gtaacaaaag aaaaaaaata
     5341 attattacac ttaatggtgt caagggggag acttgaactc ccgacctccg gcttatgaga
     5401 ccagcgctct aaccagctga gctaccctga ctaaaaataa aaatataatt atactacttt
     5461 ttactaaaaa ttttctgatt tttaaaaaaa taattttatt ttcaatattt aaaaaatttc
     5521 tttattttta aagcttttat agatataata aacgctttat ttcatagaca ggtgtccgag
     5581 cggttgaagg agcacgcctg gaacgcgtgt aaagtgcaag ctttcgaggg ttcaaatccc
     5641 ttcctgtctg ccattcttat ttttaatatt taaaatacta ttgttttgtc aaaagttatt
     5701 ttattgttta taaattctta aatttttgat aaaatattaa aaattttatt tattaggttt
     5761 tttataatgc tacaatcaag acttttgatg aat
//
LOCUS       DARATF010000097         5759 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.097, whole genome shotgun sequence.
ACCESSION   DARATF010000097 DARATF010000000
VERSION     DARATF010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5759
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.097"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            24..2114
                     /gene="cfrA"
                     /locus_tag="SB502_001525"
     CDS             24..2114
                     /gene="cfrA"
                     /locus_tag="SB502_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent ferric enterobactin receptor
                     CfrA"
                     /protein_id="HEG0434945.1"
                     /translation="MKKICLSVCAIGLLSSNAISQNVELDSSIVSASGFTQDIKEAPA
                     TINVISKKELQSKPYRDVAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLVLIDGR
                     RQGIGGEVGPNGFNEISNSLLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKVS
                     DKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRFREFYRQQSNVEFTN
                     GSGQRVQGDQAQSPTKANNFNIGTRVSYLANNYNTFIFDIDFSRNHYDNKQGQLGTIT
                     SPGSAPGSLTGGYADIMEVDKFVTYLSHEGVYENFSITSGLQYNRVSNDGREVVGQAT
                     QPFLGENRDIVAEDIILDTKSVIPLGQSHILSAGGEYRLEKMQDKIANPTNFDQYLLA
                     IFAEDEYSIKDNLRLTFGARYNHHEIFGNNISPRAYLVYNPTDELTLKGGVSTGFRTP
                     YANRLINGAYNYSGQGRFPIYGNPDLKEETSLNYEIAAIYNNDLFYVSATGFLTNFKD
                     KISTQKYNKDNMIPGIGICGVDRCFKAINHGKVEYKGIELGAGISPLDNLNVNFAYTY
                     LDSEVKEAQDKSVIGKPEQDSLKHNIMLKTEYSFYNKITPWIKGEWQIDRYMGDTNIN
                     REYYKDIFLASMGVRYDINKQWSINAAIYNLFNKSFTDGWESYQNSGAPTWVNTYNRI
                     EEGRRIYISINGSF"
     gene            2415..3209
                     /locus_tag="SB502_001526"
     CDS             2415..3209
                     /locus_tag="SB502_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HEG0434946.1"
                     /translation="MMKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRV
                     YLKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDKNIHIKNESFLKELSKEF
                     EIYCLVYGGRSLVLKEVLDLNTKFIVLDFEDEELVLKYEKEAWNFLQSLIGLDLSSIE
                     KIALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCQIHRHFKESLE
                     FEPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            3206..3733
                     /gene="grpE"
                     /locus_tag="SB502_001527"
     CDS             3206..3733
                     /gene="grpE"
                     /locus_tag="SB502_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEG0434947.1"
                     /translation="MSEQKQEIENENAQNSENLQDDLQDNEKNETNELQKELEELKDK
                     YMRANAEFENIKKRIEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECQDEISLKIK
                     EGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGYK
                     IADRVIRPTKVSVAK"
     gene            3755..5626
                     /gene="dnaK"
                     /locus_tag="SB502_001528"
     CDS             3755..5626
                     /gene="dnaK"
                     /locus_tag="SB502_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEG0434948.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLASEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
BASE COUNT         2144 a          757 c         1133 g         1725 t
ORIGIN      
        1 caatatttaa caaaaggaga aaaatgaaaa aaatatgtct atcagtttgc gccattggtc
       61 tcttaagctc caatgccata tcgcaaaatg tagaactaga tagctcaatc gttagtgctt
      121 ctggctttac tcaagatatt aaagaagctc ctgctactat caatgttatc agtaaaaaag
      181 aattacaaag taagccttat agagatgttg cagaggctat cgcagatatc ccaggcgttg
      241 atttatatgc tagcaaggga aaaacaggtt cttataatat tactatgaga ggtattacgg
      301 gatatacttt ggttttgatt gatggacgcc gtcagggtat tggtggggaa gttggtccta
      361 atggctttaa tgaaatttca aattctttat tgcctccaat ttctagcata gaaagaatag
      421 aagttataaa aggtcctatg agtactttat atggctccga agctttaggc ggggtggtaa
      481 atatcattac caaaaaagta agtgataaat gggaaacttc tgtaagcttg gacgctcttt
      541 taaatgaaaa taaagattgg ggcaatactt atggaacaag tatttattct agtggtcctt
      601 tgatgaatga caaattgggt ctaacacttc gatttagaga attttacaga cagcaatcta
      661 atgttgaatt tacaaatgga agtggacaaa gagttcaagg agatcaagct caaagtccca
      721 caaaagcaaa taattttaat ataggaacaa gagtcagtta tttggctaat aattataata
      781 cctttatatt tgatatagat ttttcaagaa atcattacga taacaaacag ggtcaattag
      841 gaaccatcac aagcccaggt agtgcgccag gtagcttaac gggtggttat gcagatatta
      901 tggaagttga taaatttgtg acttatttaa gccatgaggg tgtttatgaa aacttttcta
      961 tcacttctgg tttgcaatac aatagggtaa gcaatgatgg ccgtgaagtc gtagggcaag
     1021 ctacacagcc gtttttggga gaaaatagag atatagtcgc agaagatatt atcttagata
     1081 ctaagtctgt cattcctttg ggacaaagtc atattttaag cgcaggtggt gaatataggc
     1141 ttgaaaaaat gcaagataaa atagctaatc cgaccaattt tgatcagtat ttattggcaa
     1201 tatttgcaga ggatgagtac agcataaaag ataacttaag attgactttt ggagcaagat
     1261 acaatcatca tgaaattttt ggaaataata tttcgccaag agcttatcta gtttataatc
     1321 ctactgatga acttacttta aaaggcggtg tatctacggg ttttaggact ccttatgcaa
     1381 atcgtttgat aaatggagct tataattata gtggtcaagg tagatttcct atatatggaa
     1441 atcctgattt aaaagaagag acatctttaa attatgaaat agcagctatt tacaataatg
     1501 atttgtttta tgtttctgcg acaggttttt taacaaattt taaagataaa atttcaaccc
     1561 aaaaatataa taaagacaat atgattccag gaattggtat ttgtggtgtt gatagatgtt
     1621 ttaaggcaat caaccatggc aaggtcgaat ataaaggcat agagcttgga gcagggataa
     1681 gccctcttga taatttaaat gtaaattttg cttatactta tcttgatagt gaggttaaag
     1741 aagcacaaga taaaagtgtg ataggtaaac ctgaacagga tagtttaaaa cacaatatca
     1801 tgttaaaaac tgaatacagc ttctataata aaattacccc ttggataaaa ggcgaatggc
     1861 aaatagatcg ctatatgggt gatactaata taaataggga atattataag gatatctttt
     1921 tagcttctat gggtgtgcgt tatgatatca ataagcaatg gagtatcaat gcagctattt
     1981 ataatctttt taacaaaagt tttacagatg gttgggaatc ttatcaaaat agcggtgctc
     2041 ctacttgggt caatacttac aatcgtatag aagaaggaag aagaatatat atttccatta
     2101 atggtagttt ttaagctttg atagaaaagc caaagagctt ataaaggctt ctttggtttt
     2161 ttgtttatag catcttgtgc ttttaaaaaa gttaaattat cgaatctatt taaaatttct
     2221 tatctaatta tcaccctgtt taccaatctt gaaatatatc ctatccttat aaaaaagtaa
     2281 ctaataaaac tttagttata tagactaaat aaaattaagt atattttttt atatttatac
     2341 ttgacaaaat aacactcaat gttgtataat atatctagca atcaaaaaat agagtgctag
     2401 ctttaaagga aaacatgatg aaaagtcgag ataaaaagga tttgatttta gagtctatta
     2461 tccaaactta tcttttggat aatgcaccta ttggttctaa tgaattaaat tcaaaccttt
     2521 gtatacctgc ttcgactata cgcgtttatc ttaaaagact tagcgatgag ggtttgatca
     2581 ctcagcttca tataagtagt ggtagaattc ctactatttt aacgatgcaa aattattggc
     2641 aaagtttttg ggaaaaagaa caagataaaa atatccatat caaaaacgaa agctttttga
     2701 aagagttaag taaagaattt gaaatttatt gtcttgttta tggaggtaga agtttagtac
     2761 ttaaagaagt actagatctt aatactaaat ttatagtgct tgattttgaa gatgaagagc
     2821 tggttttaaa atacgaaaaa gaagcgtgga attttttaca aagtcttata gggcttgatc
     2881 tttctagtat agaaaaaata gctttgagag ttcattttat agatcttgta gaaaaaatag
     2941 ctagcttaag acaaaatttg atttgctata gaagtaatga agaaagagct tatcaaattt
     3001 atcaaaatga tgaatttgtt aagctcttag attgtcaaat tcaccgtcat tttaaagaaa
     3061 gtcttgaatt tgaaccttta tttaaagaag gttttatggg gcttaaggta gatgcgcagt
     3121 ttttgggcga agatgtaaat attatcttag caggtagtgt ttatacggat tataaaaaga
     3181 tattacaata cataaaggag gcggcatgag cgaacaaaag caagaaattg aaaatgaaaa
     3241 tgcacaaaat tctgaaaatt tgcaggatga tttgcaagat aatgaaaaaa acgaaacaaa
     3301 tgaattacaa aaagaattag aggaattaaa agataaatat atgcgtgcaa acgctgaatt
     3361 tgaaaatatt aaaaaaagaa tagaaaaaga aaagctaagt gctatggctt atgcaaatga
     3421 aagctttgca aaggatttgc ttgatgtttt agatgcttta gaagcagctg ttaatgtcga
     3481 atgccaagat gaaattagct taaaaatcaa agaaggagtg caaaatactt tagatttatt
     3541 tcttaagaaa cttgaaaaac atggggtggc tcttatcaaa gatgaaaaag agtttgatcc
     3601 taatttacac gaagcaatgt ttcatgtaga tagtgaaaac catcaaagtg gtgaagtggt
     3661 tcaagtgctt caaaaaggtt ataaaatagc cgatcgcgtg atccgcccaa ccaaagttag
     3721 tgtagcaaaa taaattttaa taaaaggata aaaaatgagt aaagttatag gtatagattt
     3781 aggaacaacc aattcttgtg ttgctgtgta tgaacgcggc gagagcaaag taatcccaaa
     3841 caaagaagga aaaaacacaa ctccttcagt ggtagctttt acagataaag gcgaagtttt
     3901 agtaggcgat agtgcaaaac gccaagcggt aaccaaccct gaaaaaacca tttattctat
     3961 caaaagaatt atgggtttaa tgatcaatga agatgcggct aaagaagcta aaaatagact
     4021 tccttaccac atcaccgaaa gaaatggtgc gtgcgcaata gaaatcgcag gtaaaattta
     4081 tactccgcaa gaaatttcag cgaaagtttt aatgaaacta aaagaagatg ctgaagcttt
     4141 tttgggcgag agtgttgtag atgcggttat tactgtgcct gcgtatttta acgatgcaca
     4201 aagaaaagca acaaaagaag caggaactat cgcaggactt aatgtattaa gaattatcaa
     4261 tgagcctact tcagcagctc tagcttacgg acttgataaa aaagatagtg aaaaaattgt
     4321 ggtttatgat ctaggtgggg gaacttttga cgttactgtg cttgaaactg gcgataatgt
     4381 agtagaagtt ttagcaacag gtggtaacgc tttcttaggt ggtgatgatt ttgataataa
     4441 acttatcgat tttctagcaa gtgaatttaa agatgaaaca ggcatagatc ttaaaaatga
     4501 tgttatggct ttgcaacgct tgaaagaagc agcagaaaat gctaaaaaag aattaagctc
     4561 agctaatgaa actgaaatta atttaccatt tatcacagct gatgcgagtg gcccaaaaca
     4621 cttggttaaa aaacttacta gagctaaatt tgaaggtatg attgattctt tagtggctga
     4681 aaccatcact aaaatcaatg aagtagtaag cgatgcaggg cttaaaaaag atgagatcaa
     4741 agaaatcgtt atggtagggg gctctactcg tgttccttta gtgcaagaag aagtgaaaaa
     4801 agcctttaat aaagatctta ataagtctgt aaatcctgat gaagttgtgg ctatcggtgc
     4861 ggcgattcaa ggtgcggtta taaaaggtga tgtaaaagat gtgcttttac ttgatgttac
     4921 accgctctct ttgggtatag aaactctagg cggggtaatg actaagatta tcgaaaaagg
     4981 tacaactatt ccaactaaaa aagagcaagt tttctcaacc gctgaagata atcaaagtgc
     5041 tgtaactatc aatgttttac aaggggaaag agaatttagt cgtgataata aatctttagg
     5101 aaattttaat cttgaaggaa ttccaccagc accacgcggt atgccacaaa tcgaagttac
     5161 ttttgatatc gatgcaaatg gtattttaac tgttagtgca aaagataaag caacaggtaa
     5221 ggctcaagag atcaaaatca caggttcaag cggacttagc gaggaagaga ttaataacat
     5281 ggtaaaagat gctgaacttc acaaagaaga agacaaaaaa cgcaaagaag ctgtagatgc
     5341 tagaaatgca gctgatagct tggcgcatca agtagaaaaa tctttaagtg agttgggtga
     5401 aaaagttgcc gctgctgata aagaaaatat tcaaaaagct cttgatgatt tgcgtgagac
     5461 tttgaaaaat caaaatgcaa gcaaagaaga gattgaaagc aaaatgaaag ctttaagtga
     5521 agtttctcac aaactagctg aaaatatgta taaaaaagat gagccaaaca cagcaaatga
     5581 taaaaagaaa aaagatgacg atgtaatcga cgctgaagtt gagtaatctt aaaatctcta
     5641 ttcaagcctt tttaaaaggc ttgaaaattt tttaaaattt taaaaaaatg acaaaatctg
     5701 taaaatataa tttttttatt agcttgctac ctaatttttc attgattttt taaccaatt
//
LOCUS       DARATF010000098         5599 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.098, whole genome shotgun sequence.
ACCESSION   DARATF010000098 DARATF010000000
VERSION     DARATF010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.098"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..731
                     /locus_tag="SB502_001529"
     CDS             <1..731
                     /locus_tag="SB502_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HEG0434949.1"
                     /translation="NHNFTSFVLLDKVDFNFSELKSILEDKFNIKIADENFTKEGVIF
                     SYENMLVTLNLIKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQSKLE
                     QAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYVSVYPS
                     ENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFYIYDIVLHILTYDINLKDKDILKFE
                     DGKEIKFIKSQGISVENESLKIIF"
     gene            795..1211
                     /locus_tag="SB502_001530"
     CDS             795..1211
                     /locus_tag="SB502_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEG0434950.1"
                     /translation="MKAKLTLLALLGTTVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGEWKEVDGKYKALPHTILPNVMKKVSATQSNA
                     QILEVDKEINGYKFKFNNNMEVYTDMQGNILGQKLD"
     gene            1471..2721
                     /locus_tag="SB502_001531"
     CDS             1471..2721
                     /locus_tag="SB502_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEG0434951.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNLSLFANVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGGYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGRIQGK
                     FAQTLTAIITFAIAWFVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFVLVMGIVAISAAIHDLL"
     gene            2736..4100
                     /locus_tag="SB502_001532"
     CDS             2736..4100
                     /locus_tag="SB502_001532"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEG0434952.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLC
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAELEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGVNAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(4108..4629)
                     /locus_tag="SB502_001533"
     CDS             complement(4108..4629)
                     /locus_tag="SB502_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434953.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDAL
                     NLNNEIFFYQSLKEGLFKENDEILVSNLGKKIILFRNFTQNCDNFNEAKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLVFLMICLLLLVMGAINLGLLFKQIRILKSFSKEEMK
                     EFLSLRMKKYTKV"
     gene            complement(4610..5590)
                     /gene="ribD"
                     /locus_tag="SB502_001534"
     CDS             complement(4610..5590)
                     /gene="ribD"
                     /locus_tag="SB502_001534"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEG0434954.1"
                     /translation="MKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKNEKILAIKAHE
                     KAGLAHAELNAIAHAFKNLRPEISLPKEANALHEFICKNHQGVFKDSIAFVTLEPCSH
                     QGKTPPCAKLFSELGFKKIFISVKDGNKIASGGAEFLKKQGIEVEFDILKEEGKKLLK
                     PFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRAVIDLLVVGGETIRKDH
                     PILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEAKFLMYEGGEN
                     FLKTFKDEIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIYEL"
BASE COUNT         1851 a          744 c          946 g         2058 t
ORIGIN      
        1 taaatcacaa ttttacctct tttgttcttc ttgataaagt tgattttaat ttttcggagt
       61 taaaaagcat tttagaagat aaatttaata taaaaatagc tgatgaaaat tttaccaaag
      121 agggcgtgat tttttcatat gaaaatatgt tagttactct aaatttgatt aaaaatccta
      181 tacctaatca cgaagcagaa tactatgcaa attttaattt tatgtggaaa gatgccttag
      241 agcaaactaa aaaacataaa gctcatcttc ttatagcggt gctaagtcaa gatcaaagca
      301 aattagaaca agctaaaatg tttacgaaaa ttgcagcttt atgtttggat aataaacatg
      361 ctttaggttt ttatacaggt gcagttgttt tagagcccag tttttatata gaaaatgcaa
      421 aaatgttaga tgataatcgc ttgccggtat ataattggat atatgttagt gtttatccta
      481 gtgaaaatgg agttaatgct tatacttatg ggcttagaaa ttttgataaa ttagaacttg
      541 aagtttgtga tttaaacata gaagaaaaag aacttttctt ttatatttat gatattgttt
      601 tgcatatttt aacttatgat attaatctaa aagataaaga tattttaaaa tttgaagatg
      661 gaaaagaaat aaaatttata aaaagtcaag gtataagtgt tgagaatgaa agcttgaaaa
      721 ttatttttta agtttcacat tcacttcaca gttttgagtt aaactttcgc caaccaagaa
      781 aaaaaggaga aattatgaaa gcaaaactaa ctttacttgc tttgttgggt actacggtgc
      841 ttttagctaa agatatggtt gttcctgcta gcgaacttcc aaataatgcc aaagaattta
      901 tttctaaaaa ttttaaaacc gctcaaattg gtttggtgaa aaaagatata gattcttatg
      961 atgtgatttt aaatgatgga actgaaattg attttatgat caatggagag tggaaagaag
     1021 ttgatggaaa atataaggct ttgccacata ctatcttacc taatgttatg aaaaaagtga
     1081 gtgcaactca atcaaatgct caaattcttg aagtagacaa agaaattaat ggttataaat
     1141 ttaagtttaa taacaatatg gaagtttata cagatatgca aggaaatatc ctaggtcaaa
     1201 aattagatta atttttgaaa atttaactcc cttagaaaat ttgatgcaaa aatttggaag
     1261 catagtcttc caaattttta ttttttgatt gcaaaaccca aaatatattt agttttaaaa
     1321 taatacttta ttgatacaag tgattgtttt tttataaaat taaatttaca aaatgttaca
     1381 taagatttaa aatatttttt ttaaaaaata attatttata aatattttgc taaaataaaa
     1441 gagatgtaat cttaaattta aggaagaata atgaatactc ctaaatggac tagtcacgat
     1501 acaaggtggg ttttatctct ttttggaaca gctattggag ccggcgtact tttgttacct
     1561 attagtgctg ggcttggtgg attgatacct ttgttagtta tacttgtttt agcttttcct
     1621 atgacttact tagctcatag aaatttatgt cgctttgtgc tttcaagttc taatccaaaa
     1681 gatgatatta cttttgttgc agaaagttat tttggcaagg gcggtggatt tttaattaca
     1741 cttttgtatt tttttgctat tttgcctatt ttattggttt atagtgctaa tcttacaaca
     1801 actttgcttg agttcttaat caatcagttt aatttcaatg cagatcttac tcatgctgct
     1861 cgttggtggg tgagtttttt gattgttgga gttttggttt tgatttctat tcttggtgaa
     1921 aatgttgtaa caaaagcaat gagttttctt gtttttcctt ttattatatt tttatttatt
     1981 ttttcattgc ttttaattcc acaatggaat ttatcgttat ttgcaaatgt tgatttttcc
     2041 gtaatttcaa caagtaattt ttgggttact ttatggcttg ttattcctgt gatggtattt
     2101 agttttaatc actctcctat catttcttca cttgcttgtt attgtaaaaa agaatatggt
     2161 ggttatgctg aacctcgcgc tagaaaaatt atttctttag caattattct tatggttttt
     2221 gttgtaatgt tttttgtttt ttcttgtgct ttaaccttta caccagaaga ttttgcatca
     2281 gcaaaagatc aaaatatcaa tattcttact tttatagcaa ataaatttcc tgaagtttct
     2341 ttactagctt atgttggacc tattgttgca cttgtagcta ttagcaaaag tttcttaggg
     2401 cattatcttg gttctcaaga aggcttaaat ggtattttat ataaagcaag taatggtaga
     2461 attcaaggta aattcgctca aactttaaca gcgatcatta cctttgctat cgcgtggttt
     2521 gttgcgtata aaaatccaag tgttatagga attatcgagg ctattggtgg tcctgttttg
     2581 gctattttgc ttttcttaat gccgctttat tgtatttatc gttttgatat tttggcaagg
     2641 tttcgtaata aatttttaga tctttttgtt ttggtaatgg ggatagttgc aatttctgct
     2701 gcaattcatg atcttttata aattaaggat aaaaaatgag taatttaagc atttttaaaa
     2761 taggtgttgg cccttcttct tctcatactt tagggcctat gcttgctgga aatttatttt
     2821 gtaaaaaagt tgctaaaaag cttgatgaaa ttgatagagt tgaggttact ctttatggtt
     2881 ctttgtcgtt aacaggcaaa ggacacttga gtgataaggc tgtgatttgg gggttaaatg
     2941 gcttagaagc taaaaattta agtgcggcaa tacaagatga agtaaataaa aatgctattg
     3001 aaaatgctca aattgatttt tgtggtgaga aaaaactttg ttttaattat gaaaaagatt
     3061 tgatattttc caaagatttt ttacctttac atgagaatgg tatgaagatt aaagcttatg
     3121 attgtaaagg tgggttagtt gatgaggaaa cttattattc tgtaggtgga ggctttgttt
     3181 taacagctgc ggaattagaa aaaaaaggta aaaattctaa ccaaaataaa aagaaaaaac
     3241 tagatataga gcttaataac gctaaagaag ctttagagct ttgcgataaa agagattggg
     3301 atttagcaga gctttcctat cgttatgaat tgcaatttca cactaaagag gaaattcgtg
     3361 cttattgtct tgaaatttgg gaagtgatgc aagaagtgta ttataatggt acgcatccaa
     3421 atgaagatta tttacccgga aaacttcatt taaaacgtag agctaaaggg cttaaagaaa
     3481 gagtggcgat gacagctgat cctatgggca ttatagattt tatttcttta tatgctattg
     3541 cgattgctga agaaaatgct agcggagcaa aagttgtaac cgcgccaaca aatggagcat
     3601 gtgccgttat ccctgctgtt atgctttatc ttaaaaatca tactataggt tttagtgatg
     3661 aaaaagctat agagttttta ttaacagcaa tgcttatagg ttctttttat aagaaaaatg
     3721 caagtattag cggagcagaa gcaggctgtc aagcagaaat tggtagtgct agttctatgg
     3781 cagctgcggc tatggcaaca gttttagggg ttaatgcttt taaagcatgc aacgctgctg
     3841 aaatggcaat ggaacatcat ctaggtttaa cttgcgatcc agttgcagga cttgtgcaaa
     3901 ttccttgcat agaaagaaat gcctttggag ctattaaggc tataagtgct gctagaatgg
     3961 caatgacacg taaatctact cctatggtaa gccttgatga ggttatagaa accatgtatg
     4021 aaacaggaaa agatatgaat tataaataca aagaaacttc tttaggtggt cttgctacaa
     4081 atttaaaaac agtatgctaa agtgttttta cactttggtg tattttttca ttcttagact
     4141 taaaaattct ttcatttctt ctttggaaaa acttttaaga atacgaattt gcttaaaaag
     4201 caagccaaga ttgattgctc ccatcactaa aagcaataag caaatcatta aaaaaacaag
     4261 atctatggct ccaaattcat taatcatagc caaacttgca aaaaatacgc tcgctaataa
     4321 caaaaaaaat aaaagcaata tttgttttaa ttttgcctca ttaaaattat cgcaattttg
     4381 agtgaaattt ctaaaaagta tgatcttttt acccaaattt gaaactaaaa tttcatcatt
     4441 ttctttaaat aagccttctt ttaaactttg ataaaaaaag atttcattat ttaaatttaa
     4501 agcatctttg tagcttgata aggtgtagtc tttgtaaaaa aaggatttta attcattttt
     4561 cttttctatt ttaaataatc ttaaatcatt tctcgcataa aaaaatccac taaagttcat
     4621 aaatgccata agtatcactc cctaaaaaat tcctataaag tggcttgaaa tttaaaggta
     4681 ttgtaacatt tttttcatca tttaaacttg aactttggaa aatcaaaaac atatctattt
     4741 catctttaaa ggttttgaga aaattttctc caccctcata cattaaaaat ttagcttcac
     4801 ttggaatttg ggtataaatt tggcggtttg gaactttaaa taaagggata tttttatcaa
     4861 aattatctat attttgacgg cttaagatac aaagattagg cgcttttgct ttgcaaagcc
     4921 tagcatctag tatagggtga tcttttctta tggtttctcc accgactaca agcaaatcaa
     4981 tcaccgctct aattttatgt gcataagtgc gacttagctc attgcttacg attttgccaa
     5041 aaggtgagcc gttcatagaa agggctaatt taaaaagttt aaattgccct ttttgccatt
     5101 ttaaaaaagg ttttaaaagt ttttttcctt cttctttaag tatgtcaaat tcaacctcta
     5161 taccttgttt ttttaaaaat tcagccccac cacttgcgat tttatttcca tctttaacgc
     5221 tgatgaaaat ttttttaaaa cctagctcgc taaagagttt tgcacaagga ggcgtttttc
     5281 cttgatgaga gcaaggctca agtgtgacaa aagctatgct atctttaaat acaccttgat
     5341 ggtttttgca aataaactca tgcaaggcgt ttgcttcttt aggcaatgaa atttcaggtc
     5401 ttaagttttt aaaagcatga gctatggcat taagttccgc atgagctaat ccagcttttt
     5461 catgagcttt tatggctaaa attttttcat ttttatctaa gattacacag cctacagccg
     5521 gatttggata ggttaaaaac tgatatttcc aagcctcatt taaagctaaa ttcatataaa
     5581 attctttcat ttgcctacc
//
LOCUS       DARATF010000099         5490 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.099, whole genome shotgun sequence.
ACCESSION   DARATF010000099 DARATF010000000
VERSION     DARATF010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5490)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5490)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5490
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.099"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(116..203)
                     /locus_tag="SB502_001535"
     tRNA            complement(116..203)
                     /locus_tag="SB502_001535"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(167..169),aa:Ser,seq:tga)
     gene            complement(225..298)
                     /locus_tag="SB502_001536"
     tRNA            complement(225..298)
                     /locus_tag="SB502_001536"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(264..266),aa:Cys,seq:gca)
     gene            complement(317..405)
                     /locus_tag="SB502_001537"
     tRNA            complement(317..405)
                     /locus_tag="SB502_001537"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(369..371),aa:Leu,seq:taa)
     gene            complement(415..489)
                     /locus_tag="SB502_001538"
     tRNA            complement(415..489)
                     /locus_tag="SB502_001538"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(455..457),aa:Gly,seq:gcc)
     gene            complement(561..1313)
                     /locus_tag="SB502_001539"
     CDS             complement(561..1313)
                     /locus_tag="SB502_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434955.1"
                     /translation="MLAFFKGLGVGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEITNTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDANLECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNTNANIAPR
                     MLNAKSDNIELSSPIISEKEQILSAKALFICK"
     gene            1386..2405
                     /gene="mutY"
                     /locus_tag="SB502_001540"
     CDS             1386..2405
                     /gene="mutY"
                     /locus_tag="SB502_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEG0434956.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGAKLPKEVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNLNHAFDHNQALLDIGALVCVGKNAKCGICPLYDF
                     CQGKFHTELYPRAKKILYESLNLNLFLFEFNKKFAIQKSQDKLYKGMYNFPFFKEGEY
                     KLSKDMGFVGEFKHSYTKYKLNIKVYHQILNNENKNYKFKTLKELESTALSALSLKAL
                     KLIKL"
     gene            complement(2391..3650)
                     /locus_tag="SB502_001541"
     CDS             complement(2391..3650)
                     /locus_tag="SB502_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434957.1"
                     /translation="MQELTRTKKIRSIIAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPVIQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVISVVLMALGSFMIAAL
                     PSKDTVGDLAIILLLIARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMFLFFSIDDMKDYAWRILFAIGGILALGSLFVRKMMNESATKLHQHE
                     DRGTLKALCKSWKPFLMVLGVTSGGSLAFYTITTYTKTFMENTGMDKMLVNNLFLGAL
                     FILMIIQPLFGYIGDKIGHKRSLIVFCILALVGIYPIFSLIANNAQNNPSLTFMLVVL
                     LFVILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAVFGGSAPWVALQFKNAGIEN
                     GFFIYIAIFTIIMLIATLCLPKKSELN"
     gene            3816..4673
                     /locus_tag="SB502_001542"
     CDS             3816..4673
                     /locus_tag="SB502_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HEG0434958.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSRKGIRGVMSEEKFQNLAYEIS
                     NKAELFTFHLLGDPLLLPNLGNYLKIAKDEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKAPKSNL
                     KIYEFLAKEFEAKIDANLSKNRLQRHILLHQNKLFKWPNLKDKPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDTKADINLGNVFENNFDKLFKSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLSD"
     gene            complement(4670..5476)
                     /locus_tag="SB502_001543"
     CDS             complement(4670..5476)
                     /locus_tag="SB502_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0434959.1"
                     /translation="MKKILIIMSLFLITLNAKERLVVLDPASIETLFMLKAEDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAELLKQEFAQNLKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTPILLRLSPKIIDRIQEFKTKLENNNF"
BASE COUNT         1911 a          813 c          889 g         1877 t
ORIGIN      
        1 ttctaagttt ttttaggata taacaaaaat agtaagaccg aagtattatt tttcatttgt
       61 aatatccttt ataatttcag gaatgatata agcttgataa actagaaagt cttggtggcc
      121 gggagaaagg gattcgaacc cctggaggtg tgaccctcaa cggttttcaa gaccgccgct
      181 ttcgaccact cagccatctc ccgataaagt aaagttttgc cttttggagg cgacatccgg
      241 attcgaaccg gagatcaagg ctttgcaggc ccatgcctta ccgcttggct atgtcgccct
      301 gataatgttg aaaaagtggt gcccgaggcc ggacttgaac cggcacggaa gaaaaattcc
      361 gagggatttt aagtcccttg tgtctaccaa ttccaccacc cgggcgggtg attatggagc
      421 gggaaacgag attcgaactc gcgaccccaa ccttggcaag gttgtgctct acccctgagc
      481 tattcccgca taaatttctg aaagaattga agataaaagt atagcaaaat aaacttaaaa
      541 ggagtttatt ttgccttaag ttatttgcaa ataaataaag ctttcgcgct taaaatttgt
      601 tctttttcgc tgataattgg agatgaaagt tctatattgt cagattttgc atttaacatt
      661 ctaggtgcga tattggcatt tgtatttact tgtaaatttt tcaatacaca agttttatta
      721 agatctaaag agtaagtttt ttcatattcg tatgatgttt ttaaaagctc tttgtagaga
      781 ttttctttgt tgttgtttag tgtatctttt gaaaattttg tttgtatggc tggtgttgaa
      841 acgctgatga aattattttt agctatgata gaattgatgt catttaaaag cttgttaaaa
      901 tctgcaagtt ggttttcttt aaattcacat tctaaattcg catcaaatct ttgacctttt
      961 ggagtttgta taccatcttt ataggaaaaa ttaggttcta aagaaaaact tcctccgcta
     1021 caaaaatttt ctttttttga gcgttctaaa atttgattga aagtatttgt gatttcagct
     1081 ttttcactat tgtctaatgt aatttttgaa cttaaatttt catttgccca aaaattaata
     1141 tttgcatata aaatatcggg ttttagcgta ttgcttactt ctatatttct tgaaaaatat
     1201 aaatcatgat tagagtcttt tttgcctaaa aattctacat taaaaaccac gcctgcaaca
     1261 aaaagtaata aacataaaaa acctacacct aaacctttaa aaaaagctaa catggatatc
     1321 cttaataatt taatttgagc taattttagc aaaaaatttt aaaatttttt gttatactct
     1381 catttatgca aaaaaaagag cttgaaaaac tacaagaaaa tttacttctt tggtatgaaa
     1441 aaaatggacg caaaactttg ccttggcgta atttacaaag tcaaaattgt gatgaaagtt
     1501 taaagcatat tgatagagct tatggggttt atatcagcga aattatgctt caacaaactc
     1561 aagttaaatc agttttagaa aggttttatt tccccttttt gcaaaaattt cctactttag
     1621 aaagtttggc taatgctaat gaagacgagc ttttaaaggc ttggcaagga cttggttatt
     1681 acactcgtgc tagaaattta aaaaaggcag ctttagaatg cgtggataag tttggggcta
     1741 aattacctaa agaagttgag gatctaaaaa aattaagtgg tataggagct tatacagcag
     1801 gcgctatagc ttgttttggc tacgatcaaa aggtttcttt tgttgatggc aatatacgcc
     1861 gtgtgctttc tcgtcttttt gctttggaaa atcctagcat gaaagaactt gaaaaaagag
     1921 ctaaagagct tttaaattta aatcatgcct ttgatcacaa ccaagctttg cttgatatag
     1981 gggctttggt ttgtgtgggt aaaaatgcaa agtgtgggat ttgtcctttg tatgattttt
     2041 gtcaaggcaa atttcataca gagctttatc caagagctaa aaaaatactt tatgagagtt
     2101 taaatttaaa tctttttttg tttgaattta ataaaaaatt tgcgatacag aaaagccaag
     2161 ataagcttta taagggtatg tataattttc ctttttttaa agaaggagag tataaacttt
     2221 ctaaagatat gggttttgta ggggagttta agcacagcta tactaagtat aaacttaata
     2281 tcaaggttta tcatcaaatt ttaaacaatg aaaataaaaa ttataaattt aaaaccttaa
     2341 aagagttaga aagtaccgca ctttcggcac tttctttaaa agcgttaaaa ttaattaagc
     2401 tctgattttt taggcaaaca taaagtagct ataagcatga tgattgtaaa aatagctata
     2461 tatataaaaa agccattttc tatacctgca tttttaaatt gtaaagcaac ccaaggagca
     2521 gatcctccaa aaacagcatt tgaaatagca taacccaaac ctgtccctaa agctcttaca
     2581 tgttcaggaa aaagttttgc tttaaaaatc ccagcaactg aagtataaaa acttaaaata
     2641 acaaacaata ataccaccaa cataaatgtc aaagaaggat tattttgtgc gttattggct
     2701 ataagtgaaa aaataggata aattcctacc aatgccaaaa tacaaaatac aattaaagat
     2761 cgtttgtgac ctattttatc tcctatatat ccaaaaagag gttgaatgat cattagtata
     2821 aataaagcac ctaagaaaag attattaaca agcattttat ccatacccgt attttccata
     2881 aaagttttag tataagttgt aatagtataa aaagctaaag aacctccaga ggtaacccca
     2941 agtaccatta aaaaaggttt ccaagatttg cataatgcct ttaaagtacc acgatcttca
     3001 tgctggtgaa gttttgtagc actttcattc atcatttttc ttacaaaaag cgagcctagt
     3061 gctaaaattc cgcctattgc aaaaagtatt ctccaagcat aatctttcat atcatcaatg
     3121 ctaaaaaata aaaacattat actaatgctt gcaacggcca aaagttgacc acctattagg
     3181 gttacatact gaaaagatga gtaaaaaccg cgttttcctt ccgtagcaag ttctgaaaga
     3241 taagtagctg ctatgccata ctccccgcct acactaagac cttgaataag tcttgctatt
     3301 aaaagcaaga taatagcaag atcgcccact gtatctttgc ttggtaaggc tgctatcata
     3361 aaagagccca aagccattaa aaccactgat ataaccatag atttcttacg acctacttta
     3421 tcagccaaag aaccaaaaag ccaagaacct ataggacgca taaaaaatcc tgctgcaaaa
     3481 actccaaagg cattgatttg ctggataaca ggattatctg aagttgaaaa agtatgagca
     3541 aaataagttg ctgtaaaagc atagatataa aagtcaaacc actctactaa atttccgcta
     3601 cttgcagcaa taatagagcg aatttttttc gtgcgagtaa gctcttgcat aaacccttcc
     3661 ttaattttag atttttattt aagtatagtg tgatttttgt ttaatatatt taaaaataaa
     3721 gaagagaaat aaaaaagata aaaatatcga taaaaatgtt acatatttta ataaatttca
     3781 taaattttgg taaaatgttt actctaggaa atataatgaa atttaaaaaa atatatatag
     3841 aattaagtga tatttgtggt ttaaaatgcg atttttgtcc ttctcgaaaa ggaattcgcg
     3901 gggtaatgag tgaagaaaaa tttcaaaact tagcttatga aatttctaat aaagctgagc
     3961 tttttacctt tcatcttttg ggcgatcctt tgcttttacc taatttggga aattatctaa
     4021 aaatcgcaaa agatgaagct atgaaacttg aaatcactac aagtggcttt tatctaaatt
     4081 ctaaaaatca agctttattg ttagggtatg agaatatcca tcaaatcaat atttctttaa
     4141 tgtctttttt aagtcaaagc aaaatttctt tagaacagta ttttaagcct attttagaac
     4201 tttgcaaaaa gcatttagag caaaaaagcc tttcttttat caatctaaga ctttggaatt
     4261 tagatgctaa ttttaaagca cctaagtcaa atttaaaaat ttatgagttt ttagccaaag
     4321 aatttgaagc taagatcgat gcaaacttaa gtaaaaatcg cttacaaaga catattttgc
     4381 ttcatcaaaa taaacttttt aaatggccaa atttaaaaga taaacccctt tataaaaaag
     4441 gaaaatgcca tgctttaaaa gagcaaattg ggattttaag tgatggaagt ttagtgcctt
     4501 gctgtttgga tactaaagca gatattaact tgggaaatgt ttttgaaaat aactttgata
     4561 agctttttaa atcaccgcgt ataaagatga tgaaaaaagc ttttgaagaa gataaacgca
     4621 tagaaaaact ttgtcaaact tgcgaatttt ttaaagcaag attgagtgat taaaaattgt
     4681 tattttctag ctttgtttta aattcttgaa ttctatctat tatcttagga ctaagacgta
     4741 ataatatagg tgtatctttg ttaaaataaa tacttcctgt tttaactgct ttggtatttt
     4801 tcaataaagc atttgtatct aaaagattgt ttttagcatt aattccaaga atgagtatat
     4861 ctggattttg tttcagtata tattctgctg atataacagg tcttgaaatt tgactttgcg
     4921 gacttaaatt tttaatccct ataagtctta aaatatcagc tattaaagaa ttatcattaa
     4981 aggccattaa agggttgcta gaataaagat aaatcgcact tttatttagg ggtttatcgc
     5041 ttaatttttt taaattttga gcaaattctt gttttaaaag ctctgcttct ttttcttttt
     5101 tggtgatttg gcctaaggtt gtgatatttt ttgttatatc ttctaaacgc tcggctttta
     5161 aattgatact tttgatacca aaatttttaa gtccttcttc taaatttaaa gaataagagc
     5221 ttaaaatcac caaacttggt tttagtgcta ctattttttc aagtgaagga tttgaaaaag
     5281 tgcctacgct tgtaagtttt gaggtttgat ctttaggata gatatttgag tgttgtaaag
     5341 tggcaatgcc tacgatttga tcttcagcct taagcataaa aagggtttct atgcttgcag
     5401 gatcaagcac tacaaggcgt tcttttgcat ttagtgtgat taaaaacaaa ctcataataa
     5461 ttaaaatttt tttcattttt tctcctttaa
//
LOCUS       DARATF010000100         5338 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.100, whole genome shotgun sequence.
ACCESSION   DARATF010000100 DARATF010000000
VERSION     DARATF010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.100"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(105..515)
                     /locus_tag="SB502_001544"
     CDS             complement(105..515)
                     /locus_tag="SB502_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEG0434960.1"
                     /translation="MMDLKEIAQFLDDNAPAFLATLGTCGNPRVRPIQSPLLVGDKIY
                     FCTANTKGLFKHIKNYNGIEFCSCAKDGTFLRLRANAVFEPNLEVKKMMFKKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
     gene            complement(522..1265)
                     /gene="fabG"
                     /locus_tag="SB502_001545"
     CDS             complement(522..1265)
                     /gene="fabG"
                     /locus_tag="SB502_001545"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEG0434961.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFSSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            complement(1337..2815)
                     /locus_tag="SB502_001546"
     CDS             complement(1337..2815)
                     /locus_tag="SB502_001546"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEG0434962.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLQKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKIKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDTCLGEIIECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQAKGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            2895..3956
                     /locus_tag="SB502_001547"
     CDS             2895..3956
                     /locus_tag="SB502_001547"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEG0434963.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKNNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALIGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            3956..5164
                     /locus_tag="SB502_001548"
     CDS             3956..5164
                     /locus_tag="SB502_001548"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEG0434964.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDVMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVMGGNVGTPLAELNPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKRMNECDVVILPKIYANTPTKAHKISYEDEKDLA
                     VKFGIDTEKISFKSPFLLDAIMALAIEKILLDTLSYELLNSFVMEKNKLEELKDSQNR
                     LWVNDTKATNESAVMAALSRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYAERG
                     KVFKECVNKI"
BASE COUNT         1764 a          958 c          724 g         1892 t
ORIGIN      
        1 aaattaaacg gaatgattat accttaaaaa aataacaaaa agttaatatt aattaagata
       61 atatttatct taattaatat atagttaata aaattatcaa atcattaagc cttaaaaagc
      121 ttaaattctc cattcataaa ttgcattcta gcgcttaaat gatcaagata aaaaacttca
      181 aattttggat tttgcggagt ttcataaaga tttacaagat aaggatattt tttaaacatc
      241 atttttttaa cttctaaatt tggttcaaaa accgcattag ctctaagtct taaaaaagtc
      301 ccatcttttg cacaagaaca aaattcaata ccattataat tttttatatg cttaaaaagt
      361 ccttttgtat ttgctgtgca aaaataaatt ttatctccca caagcaatgg actttgtata
      421 ggacgcactc taggatttcc acaagttcct aaagtggcta aaaatgctgg tgcattatca
      481 tctaaaaatt gtgctatttc ttttaaatcc atcatttttc cttacatata taaaccacca
      541 ttgatcttaa gcacatcgcc tgtcacataa gaggcataat cactaagtaa aaacgctaca
      601 caattagcca cttcttcagg ttctgcaaag cgttttaaag ggatattgtc ttgataggtt
      661 tgtttgattt catcacttaa aacttcagtc atatcgcttt ttatgaaacc tggagtcaca
      721 cagttaaagc gtaaatttct acttgctcct tctttagcaa aagatttagt catagctatc
      781 attccacctt tactagcaga ataatttact tgtccagcat tgcccatttc tccgacaata
      841 gaagcgatat ttacaacagc accaaaacgt tttttactca tggtttttaa agcttctcta
      901 caacctaaaa aagctgagct taaatttgta tctacaacgc tactaaagtc ctctaatttc
      961 attcttaaag caagtttatc atttgtaacg cctgcattat ttacaagata acttaattct
     1021 ccatcactct caactatagt ttttacaccg ttttcaaact catcttcttt gcttgcatca
     1081 aatttaatca cagcagcaac gccaccactt gcaataattt catcttttaa agcatctgca
     1141 agttcaggtt ttgaacgata attgatccaa actttaagtc caaaacccgc caaagttttt
     1201 gcgatagaag cacctattcc cttacttgct ccagtaatta aaacattttt tccactaaat
     1261 ttcattatct atccttaata agtttaattt taaaaattgc aatcttaaca aatttcttat
     1321 aaaaaaggca aacaaactaa aataaagcct cattcatttc ttttggaatt tctaagtcta
     1381 aaattttaag cacgcttgca gcgatattgc taagccccat attatcttta atctttgaaa
     1441 ctccctttgc ttgcacaaaa acaaaaacat caaaagtggt gtgattggta agcaaatttc
     1501 ctttttcatc ttgcatagcc tcgcaatttc catgatcact tgtaatgata aaagcataat
     1561 catgcttttt tgcacattct ataatctcgc ccaaacaagt atccaccgct tcgacagcct
     1621 ttatagcagc attaaaatca cctgtatgtc caaccatatc tccatttgca aaatttacca
     1681 ctataaaatc ctcacccttt tctatgcctt ttttcactgc atcacacact tcaaaagcac
     1741 tcatttgggg tttttcatca taagttttta tcttggggct tgggattaaa acccttgttt
     1801 cattttctaa aagctcttct tttccgccat taaaaaagaa agttacatgg gcgtattttt
     1861 cggtttctgc ggtatgaagc tgactaagcc ctgctttaga aatcacttgc gctaaagtat
     1921 tttcaatttt ttctttttca aaaagcacag ggagtttaaa tttatcatca taaacactca
     1981 tagtaagtaa attttcaaag attttttcgc gttcaaactc tttaaaatcc ttagaattta
     2041 acacttcaac aagttgtttc attctatcat ttctaaagtt gataaagata atgccatctt
     2101 cttctctcat gcccttgtaa ttctcatttt gagctgcttt gataaactca tcagtaacat
     2161 tttcatcgta agatttttgt aggtattcta ataaatttgg cactttataa gccttaccta
     2221 acaagcactc ataatactct tttaccctat cccaacgctt atctctatcc atagcataaa
     2281 aacgcccaca aagcgtagca aaatgcacgc ctaagttttc acaaaattct tttaaatctt
     2341 ttatgaaatt taagccactt tttggactta catcacgccc atcagtgatt gcgtgagcaa
     2401 aaacttcatt gccatttttc gcacaaattt caagcatggc tttaaaatgc gtatccatag
     2461 aatgcacccc gccatcacta taaagcccta taatatgcac tcttttacat tttgctaaaa
     2521 gtttttgtaa attctcattt ttttcaagtt ctttgttttc aatggcttta ttaatacgca
     2581 ctaaattttg ataaataata cgcccacttc ctatacacat atgccctact tcactatttc
     2641 ccatctgccc ttctggcaaa cctacagcta aaccactcgt ttttagtaaa gaatttggga
     2701 cttccttaaa aagcttttca taacttggtt ttttagctgc ttcaaaagca ttaaacttac
     2761 tattcttatt ataccctatt ccatctgtaa taattaaaac gcatttttgc ttcatttttc
     2821 tctcttttat aagaattttt ttggttagat tttactaaaa ttaaactttt aaaaaccaaa
     2881 aagaaggcta ggttttgtat tatctttcag atttaagtca ttatgctttt tttacttata
     2941 ttagtgtgcg tgcaggattt gcatttttta tcgctttatg tttgtcttta tttttaatgc
     3001 ctaaatttat tacttgggca aaagctaaaa atgctagtca acctatttac gaatacgccc
     3061 cagaaactca taaaaccaaa tgccatactc caaccatggg tgggcttatt ttcattagtt
     3121 ctgcagtaat cgcaagttta ttttgtatca aatttgataa tatttttgct ataagtgctt
     3181 tactttgttt gatacttttt tgtttgatag gactcataga tgatttaggc aaagttctaa
     3241 aaaaaaataa tcattcagga cttagtccaa gaatgaagct tttagcacaa atcatcgctg
     3301 gacttatctg catcttacct ttatatttta gttcagagct tagcacggaa ctttttatac
     3361 ctttttataa acaccctctt tttgatatgg aaatttttgc cattgctttt tggattttgg
     3421 ttttaatttc tagctctaat gctgtaaatt taaccgatgg acttgatggc ttagctacag
     3481 ttccaagcat tttttcttta tctactttag ggatattctt atatttgagt ggaaatttaa
     3541 attatagtga atatctactt ttgccaaaaa ttcaaggact tggtgaagta gtgattattt
     3601 gtgctgcatt aatcggtgct ttaataggat ttttatggta caactgttat cctgcgcagg
     3661 tttttatggg ggatagcggg agtttagctt taggtggatt cataggattt ttagctatca
     3721 ttagcaaaaa tgaaatttta cttttactca taggttttgt ttttgttctt gaaactgttt
     3781 ctgtaatttt acaagttgga agttttaaaa tttttaataa aagagtattt aaaatggcac
     3841 ctattcatca tcattttgaa aaagttggct gggtagaaaa taaaattata gtgcgttttt
     3901 ggatgatagc cttactttca aatttacttg cacttgcatc aataaagcta agataatgaa
     3961 aatttcactt tttggatacg gaaaaaccac acgcgctatt gctgaaaatt tggtagataa
     4021 atttgggcct tttgatatct atgatgatca ttttacagaa acaaaaaaag atacactagg
     4081 aaatttactt ttaaatccta atgattttga tgataattta agcgatattg aaattcctag
     4141 tccaggtttt ccaccaaagc acaaactcat tcaaaaagca aaaaatttac aaagcgaata
     4201 tgactttttt tacgatgtca tgccaaaatc cgtttggata agcggaacca atggcaaaac
     4261 caccaccaca caaatggcta cacatttatt atcacacatt ggtgctgtta tgggtggaaa
     4321 tgttggaact cctttagcag agcttaatcc ttatgcaaaa ctttggatac ttgaaacttc
     4381 atcttttacc ctacactaca ctcataaagc taaacctgaa atttatgcac ttttacctat
     4441 aagtcctgat catctttctt ggcatggaag ttttgataat tatgttcaag ataagctaag
     4501 cgttttaaaa agaatgaatg aatgtgatgt agtaatactg cctaaaattt atgcaaatac
     4561 tccaacaaaa gctcataaaa taagctatga agatgaaaaa gatctagctg ttaaatttgg
     4621 cattgatacg gaaaaaattt cctttaaaag tcctttttta ctcgatgcta tcatggcttt
     4681 agctatagaa aaaattctac ttgatacttt aagctatgag cttttaaata gctttgtaat
     4741 ggaaaaaaat aaactcgaag agcttaaaga cagtcaaaat aggctttggg taaatgacac
     4801 taaagctaca aatgaaagtg ctgtaatggc tgcacttagt cgctataaag ataaaaaaat
     4861 ccatcttatc atagggggag atgataaggg tgtagatctt agcaatttat ttgattttat
     4921 gaaaggattt gatatagaac tctatgctat aggtattagt actgaaaaaa tgcttgatta
     4981 tgcaaaaaaa gcgaatttga aagcctataa atgtgaagtt ttatctaagg ctgtaaatga
     5041 aatttcaaat cacttaagag tcaatgaagt ggctctttta agtcctgctt gtgcaagttt
     5101 agatcagttc aactcttacg cagagcgtgg aaaagtcttt aaagaatgtg tgaataaaat
     5161 ttaatttatt ttacaatcca tacaaatata ttaaactttc caaaccccta aaaacaccct
     5221 attctctcta aaaaccctaa ccagcaacaa actctttttt aaacacgatt ctaagcacca
     5281 tctaaaacaa caataaaaat aaacatagga tttatatata aagtaagtaa tgaagaca
//
LOCUS       DARATF010000101         5206 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.101, whole genome shotgun sequence.
ACCESSION   DARATF010000101 DARATF010000000
VERSION     DARATF010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5206
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.101"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            65..559
                     /gene="cetC"
                     /locus_tag="SB502_001549"
     CDS             65..559
                     /gene="cetC"
                     /locus_tag="SB502_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HEG0434965.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
     gene            664..2043
                     /gene="cetA"
                     /locus_tag="SB502_001550"
     CDS             664..2043
                     /gene="cetA"
                     /locus_tag="SB502_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HEG0434966.1"
                     /translation="MIKYGLLLTIFLSVIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            2061..2558
                     /gene="cetB"
                     /locus_tag="SB502_001551"
     CDS             2061..2558
                     /gene="cetB"
                     /locus_tag="SB502_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HEG0434967.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAK"
     gene            2646..4505
                     /gene="mnmG"
                     /locus_tag="SB502_001552"
     CDS             2646..4505
                     /gene="mnmG"
                     /locus_tag="SB502_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEG0434968.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     ARNKLLKLPNLEISQEQASVLIVENDEVKGVKTNLENIYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSRNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KVNRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSVKGFENAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPIFETMDHYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            4506..>5206
                     /locus_tag="SB502_001553"
     CDS             4506..>5206
                     /locus_tag="SB502_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEG0434969.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     AYFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILHFSREKNQGKIYISTKKLM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEF
                     KLIKKEQISLKLFFL"
BASE COUNT         1820 a          643 c          921 g         1822 t
ORIGIN      
        1 tgttgtttgt tattggtaat aattctattt ttgatttatt tgttttattg ggatgtttta
       61 aattatgaaa gaaatagttt tgtctgaaaa tgctttaatt acttctaaaa cagatcttaa
      121 ggggaatatc atttatgcca ataatgactt tttaaaatac gcaggttata aagttgatga
      181 acttttgtat aaatctcata atatagtaag acatgaagat atgccacgca ctgtatttaa
      241 atgtctttgg gattatattc aaaaaggaga tgaaattttt gcatttgtga aaaataaagc
      301 caaagatggt aatttttact gggtttttgc aaatgtaagt gcttcatttg atactaatgg
      361 aaatatcatc aattattatt ctgttcgtcg tgcacctaat agaaaatctc tttctataat
      421 tgaagaagtt tataaaattt tacttgaaaa agagcaaaaa tcgggcatta atgctggagt
      481 ttcagcttta atggatattg taagttctta taaaatgact tataatgaac ttatttttaa
      541 cttacaagaa aataattaaa taagatatat tttatctttt ttattgtata attttcacct
      601 agaagttaaa gcattgtttt gatttatgac ttcaaaaaat tttcaataaa aaggggtaaa
      661 tttatgataa aatatggatt attgttaact atttttctaa gtgttatcgg tgttttaggt
      721 gtcattttta ttcatatttt tgttggagcg ataatttttg ttttaatcgc tgttttaatg
      781 atttatttgc ttagacaaca caaagatgag caaataatga tagataaact tttggttctt
      841 tgtagagagt taaaggaggg taatttcgac aatagaatca tctatgtaaa aacaaaaagc
      901 aaaaaattag ccgaaatagc agataatcta aataatacta ttgatgggct agaagcttac
      961 ttaagggaaa ttaatacttc tatttcatgt tctcaaaaag gtgaatttta tcgtaaggct
     1021 ttgcctgaag gtttaaaagg aatttttgct cataatatcg aatttataaa taaagcttta
     1081 gcaaacatag aagtgacagc aagatctact tttaaaaatg ctttatcaag aactttaatg
     1141 gatttaagcc ttggaaatca aaataaagac atgtctcaaa tttctagctc attaaatcaa
     1201 gatattagca tgatgaaaaa tgtatatgat acagtggatg ccatttctca tacagctaca
     1261 gaaaatggtt cagaggtgga ttctcttcaa agtgctatgg gttctttaat ggatgttgta
     1321 aattcgagca aggagacagt acaaactttt gtggctaatt cacaaaatat cacttcagtg
     1381 gttgaagtaa tacgtgatat agccgatcaa accaatcttc tagctttaaa tgctgctatt
     1441 gaagctgcgc gtgcaggaga gcatggtagg ggctttgcgg ttgtggctga tgaagttaga
     1501 aagttagcag aaagaactca aagatctaca agcgaaattt ctattgcaat tcagactatg
     1561 caacaagatt ttgtaaatat ccaaagtggc agtgagcaag tttttaacat tgttagtgaa
     1621 tctgaagaaa gaattaataa attttctcaa gcttttaaac gtctagaaga aaatagtagt
     1681 gctcttggtg ttaattttgg atcctttgca aagagattga ttttgtctgt ggttaaaatc
     1741 gatcatattc tttataaatc aaatatatat ttaaatttaa atggggctca aaatttcaat
     1801 cttgaaagtg tagatccaat ttctaatctt tgtcaagatg agagagctca aggtgttatt
     1861 aatgagctta gttctgaaac tgagttaaat ttagctaaag aatttataaa agataacgct
     1921 aaaaaagcaa tagaagaatc aagtcaagat tatatcgatc aaaaagctta tgatgcgatt
     1981 gtaaatgata ttaaatcact agagcaaaga agtgctgaaa tcttagcaaa attaaaaata
     2041 taaattaaga gggtgggaaa atgtcaagag aaattttttt acaagaagat agtttaatta
     2101 cttctaaaac agatttaaaa ggtaaaatag tttatgcaaa tgatgatttt ttaaagtatg
     2161 caggttatac catgggtgaa gttttaaata aacctcataa catagtaaga catgaagaga
     2221 tgccaaaaac tgtttttaaa tatttatggg attatatgaa agaaggcaaa gaaatttttg
     2281 cttacgtaaa aaataaaacc aaagataaca attactattg ggtttttgca aatgtaaccc
     2341 catcaataga tgttaataat aatatcatag gctattattc cgttcgtcgt atgccaaata
     2401 aaagcgctat ttctacaata gaaagtcttt atagcgatct tttaagagcc gaacagcaac
     2461 aaggcttaaa taagggtgtt gagatgctta aaaatttctg caaagatgca gataaaactt
     2521 ataatgagtt aattttctct cttcaagaag ctaaataaat ttttgttaga cttaaaacga
     2581 gtttgtttta agtctaaata ttatataatc tttcttttaa aaattcacat ttttcaaggc
     2641 aaaatatgtt tgatgtcatt gttataggtg gtggacatgc aggtgttgaa gcaagtgctg
     2701 ctgctgctag aatgggtaaa aaaaccttac ttttaactac attgattgag caaataggag
     2761 cggcaagttg taatccagcc ataggtggac ttgctaaagg gcatttggta aaagaacttg
     2821 atgccatggg tggtcttatg ggtgaaatca ccgatgaagc agggatacaa tttcgcattt
     2881 taaatgaaag taagggtgta gccgttcaag gaagtagggc acaaattgat atggataaat
     2941 accgtatcat tgcacgtaat aaacttttaa aacttccaaa tttagaaatt tctcaagaac
     3001 aagcgagtgt tttaatcgta gaaaatgatg aagttaaagg cgtaaaaaca aatttagaaa
     3061 atatatattt tgccaaaaaa gtcatcctaa caacaggaac ttttttaaat ggacttattc
     3121 acgtaggtga aaataaactt caagcaggaa gggtagggga gcttgcttcg gtaaatttag
     3181 gaaattatct gcaaactttg ggtttaaaaa tgggacgttt aaaaacagga acttgcccaa
     3241 gagtggatgc aaaaagcatt gattttagcg tgcttgaaat tcaagatggt gatgtaaatc
     3301 ctaaagcttt tagttttcgt tcaagaaatt tcaatcctac tcaacttcct tgttatatcg
     3361 cacgcactaa tacaactaca catgagatta ttaagaataa tttttatcgt gccccacttt
     3421 ttacaggaca gattgaaggt gtggggccaa ggtattgtcc ttctatagaa gataaggtca
     3481 atcgttttag cgacaaagaa agccatcatc tttttataga gcctcaaact atcgatgcga
     3541 cggagtatta tatcaatggt ttttctactt ctttacctta tgaagtacaa actcaaatgt
     3601 tgcgttctgt aaagggtttt gaaaatgcta aaataacccg ttttggttat gctatagaat
     3661 atgactatat agagccaact gaacttaagc atactttaga acttaaaaag attaaaaatc
     3721 tttattgtgc aggacagatt aatggaacta caggttatga agaggctgca gcacaaggct
     3781 ttatggcggg aatcaatgca agcttaagca tagatatgaa agagcctttg attttaaggc
     3841 gtgatgaagc ttatatagga gttttaatcg atgatttggt agtaaaaggt acaaaagaac
     3901 cttatagaat gtttacttca agagcagaat ttagactgct tttaagggaa gaaaatgcta
     3961 tacttagact tggaaaatat ggctatgatt tggggctttt aagcgagcaa gattttactt
     4021 atatacaaaa tatcgcaaac aatcttcaaa aaggacttga atttttactt tctaaagaat
     4081 tcacgcccaa taaccaaaac aatgcttttt tagagagttt gggagaagat aaaatttctt
     4141 ctatagtcaa tcttcaaaaa attgtcgcaa gagcaagttt tgatatagaa aaattaaaaa
     4201 aacttgaccc tatatttgaa actatggatc attactcctt aagagagatt ttaaatgagg
     4261 caaagtatta tcattacatt agtatgcaaa aagctcaagt agaaaaaatg aaaaatctta
     4321 gtgagcttaa aattcctgaa aattttgatt ttaaaagtgt aagtggtttg agtaatgagg
     4381 ttgtagaaaa acttaatcat cataaaccgc caaccatttt tgctgcaagt caaatcagtg
     4441 gaatcactcc tgcagcgtta gatattttac aaatttatat caaaatgcaa aagaaaaaag
     4501 cttaaatgct tgcttttttt atttttttat ctactttagt tttacttttt tggcgtccat
     4561 ggaatttacc tatttgggta ttttctagct tgggggcttt ttttgttttt atttttcaat
     4621 tggtagattt taaagatgct tattttgttt tttctttggt ttgggatagt tctttaactt
     4681 tggttgggtt gattattctt tcttttagct tggaagcttt gggatttttt gattttattg
     4741 cgagtaaaat tttgcatttt tctagagaga aaaatcaagg taaaatttat atcagcacaa
     4801 aaaaattgat gttatttttg ttgatttttg tcttttttct ttctgcattt tttgctaacg
     4861 atggagcgat tttaatcatt acacctatta ttatagcttt attttcaact cttaaagatt
     4921 gtaaaaatca tgcttttatt ttaagttctt ttttacttag cctttctttt ttatgtgatg
     4981 caagttcaaa cgctttggtt atttcaaatt taaccaatat catcacagca aattatttta
     5041 agatagaatt tttagaattt gctaaaaata tgtttttgcc aaattttttt gttttgcttt
     5101 ctactatagt tacggttttt gtgctttatg tgagagtttt acctaaaagg cttgaattta
     5161 aattaatcaa aaaagagcaa atttcattga aattgttttt tctttg
//
LOCUS       DARATF010000102         5049 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.102, whole genome shotgun sequence.
ACCESSION   DARATF010000102 DARATF010000000
VERSION     DARATF010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.102"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..459)
                     /locus_tag="SB502_001554"
     CDS             complement(<1..459)
                     /locus_tag="SB502_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434970.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDANKH
                     TSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDD"
     gene            complement(516..1283)
                     /gene="fliR"
                     /locus_tag="SB502_001555"
     CDS             complement(516..1283)
                     /gene="fliR"
                     /locus_tag="SB502_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEG0434971.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITAQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFS"
     gene            complement(1270..1905)
                     /locus_tag="SB502_001556"
     CDS             complement(1270..1905)
                     /locus_tag="SB502_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0434972.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLTLNTKDCIAIQGSSGCGKSTL
                     LHILSSLLIPKKGEVFFKGSNLYQMDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQDLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDSKLASFCDKIYTINVNGIC"
     gene            complement(1918..2991)
                     /locus_tag="SB502_001557"
     CDS             complement(1918..2991)
                     /locus_tag="SB502_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEG0434973.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSAEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVLDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(2991..3782)
                     /gene="rpsB"
                     /locus_tag="SB502_001558"
     CDS             complement(2991..3782)
                     /gene="rpsB"
                     /locus_tag="SB502_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEG0434974.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAISEEDFGEEQE"
     gene            complement(3898..5046)
                     /locus_tag="SB502_001559"
     CDS             complement(3898..5046)
                     /locus_tag="SB502_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006017955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0434975.1"
                     /translation="MIKFILSKWNYGNFRIVFWDQEEFHVGNQPAKFSLIFKEKIPFL
                     KLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQKQESK
                     NIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLKEGEKL
                     LDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQNYQDL
                     EFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKTNAWID
                     KYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNEVLDKVREKY
                     DEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
BASE COUNT         1709 a          962 c          583 g         1795 t
ORIGIN      
        1 atcatcatca aaactcaaat cttccattcc ctctgaattt atatctaaag aattttcatc
       61 aggcaaatca tctaaattta aattatctaa atccaagctt atatcagcat aaggattttc
      121 atcattgctt aacattggca aatcaataga tgtatgcttg ttcgcatctt tattattaag
      181 caaatttaaa aaatctgtag gtaaaaaagg tttttgtaaa atttgcgcat ctatatcttc
      241 tacattttga tttcgcgggg ctaaaaaaat caatctatcg catttttctt taagaatttt
      301 taaaggtgct ggagtatcac tatctacaac aatcacatca taattaccca aattttcact
      361 ataagcatta agttcttcaa aatcataaga cattttttta gcactaaggc ttacaagtct
      421 tgaaactaca gggttttcat ttaaaagtaa aattttcatc actttaatcc ttaaaaaata
      481 atcgctattt tacgataatt tcatttatcc tttccttagg agaaaaaaag agtttgcata
      541 tgagtaaaaa gttctaaaat taaattttta aaatattgca tcataactag taaaatagca
      601 atcaaaacta caaaacctag agctatcttt ataggatagc caataactaa aagattaaat
      661 tgtggcattg ttttcatcaa aagtccaaaa ataacatcgg ctaaaagtga aattccaagt
      721 ataggaaagc tcatagtaaa acctatgatg aaaatattaa acatacccat atttaaataa
      781 tgcattaaat tctcatgcgg ataaaatcca cctaaactaa tataacccaa agaatgactt
      841 aaaaacaaaa gcattaaatg atggccatca aaagcaagaa aaaacatcaa agcaagtaaa
      901 ttcaaaattt gtgccgtaat aggcatactc gttccagaac ttggatctaa tatacttgcc
      961 atagtaaatc ccatagtaaa agcaatctgc tcacctgcca tcataataat agcaaaaata
     1021 atttgaagca ttaatcctgc tatcattcca aaaatcactt cactaataag ctgtaaaaca
     1081 aaaaaactat ctaaatgcaa agattctaat ctagccaaag gatataaata catagtcaaa
     1141 aataaaacta tagtactttt tattaccata ggaatagaat tatgtgaaaa aaaaggaaaa
     1201 aaaactataa gaccactcat tctagcaaga agcaacataa aagttacaac atttttatcg
     1261 cctaaataat taacaaattc cattgacgtt tatagtataa attttatcac aaaaacttgc
     1321 gagcttacta tcgtgagtta caaaaaataa agccgcatca ttttctttaa cataagaaat
     1381 taaaagttcg ataacatttt tagcattatc aaaatccaaa tttccagttg cttcatcagc
     1441 aaaaataatc tttggttttt tacaaagcac acgtgcgata ctcacacgct gttgttgtcc
     1501 gccgctaagc tttcctattt tttgatgcaa aagtgtatca atacctaacc tttttaaaat
     1561 tttctcatct aaatcttgac ccgataaaac actagcaagt tcgatatttt ctaaagctga
     1621 aaaaccttta aaaagataat gtgtctgaaa aataatacca aaatcatagc ggcgaatttt
     1681 taatctttcg ttttcatcca tctgataaag attagaacct ttaaaaaaaa cttcaccttt
     1741 ttttggaatt aataaagaag aaagtatatg caaaagagta gatttaccac aaccgctact
     1801 cccttgaata gcaatgcaat ctttagtatt taaagtaaga tttaaaccct caaaaagcgg
     1861 ataatcaaaa ctatggctta aattttccgc tcttaagagt tccattttta accgttttta
     1921 aagttgtgca gcaacttcag ccgcaaaatc ttcagttttc ttttctaaac cttcaccaac
     1981 ttcaaagcaa ataaattcta caattttaat ttttccacca aattcttttt ctttttcggc
     2041 aattacttgt tctacagttt ttttgtcatc cagtacataa aactgaccca ttaaagtaag
     2101 tttgctatcg agttgagaat tatcggctat aaagctattc attttacctg gaatgatatt
     2161 atcccaaatt ttttcaggtt taccttgagc tttaagttct tctttgattt tttcttcagc
     2221 ttcttttaaa attgcatcgc ttaattgttt gcgacttgca aattgaggaa ttttatgttc
     2281 aggtttattt ggatctttca gtctacgtct ttcttcattt tctttttcaa gttcagcaac
     2341 caaggctttg tattcatttt caacaaaagt catatccaaa tcttcataac ttaaataact
     2401 tggtctcatt gctgcaatat gcatacaaat ttgtcttaat aaatctcttg attttgaagc
     2461 tacttcagca ctatcacaag ctgcagcgat cacaacacca acacggccat ttgtatgaat
     2521 ataaccattt acaacgccgt tagcacctgc ttttaaagtt gcaaatcttc ttacaactaa
     2581 gttttctcct atagttgcaa tttgactttt taaatattct tcaaatttta caccattaat
     2641 cgtacttgag tgaagctctt ccacactttg caagctattg ctttgaatat gagctgtagt
     2701 atcttttgtt aaagcgataa actgatcatt ttttgccaca aaatctgttt cggaattaat
     2761 ctcacttaca gttgcgcttg taaaatcatc acttactttt acacttacta aaccttctgc
     2821 agcaagtcta tctgcttttt tagcagcctt acctaaacct ttttctctta aaagttgtac
     2881 tgctttatca aaatctccat tagtttcact caaagcattt ttacaatcca tcatccccgc
     2941 acctgtactt tcgcggagtt cttttaccat tgcagcagta atttcagcca ttattcttgc
     3001 tcctcaccga agtcttcttc gcttatcgct tcatctaaaa cttctttttt ctcttcatcg
     3061 gtgatttctt tttcttcatt tgctaaagct tcgccatctt gttctcttaa agcttttcct
     3121 tcattaatcg cttcagccat ttcttggcag aaaagttgca ctgaacgaat tgcatcatca
     3181 tttcctggaa taggataagt taccaaatca ggatcgcagt ttgtatctag tggagctaca
     3241 acaggaattc ttaatctatt tgcttcttga acagcaattt tctcttttac tgtgtcaata
     3301 acaaaaatca tatcaggttg agttttcata taacgaattc cacctaaata agctaataat
     3361 ttttcttttt ttcttgtaag cattaaagct tcttttttag ttaaaagttt aatacttcca
     3421 tcttcttcca ttttttcaat tacttctaat tttctaattg attggcgaat ggtaccaaaa
     3481 tttgtcatca taccgccaag ccatctatga tttacataag gcataccgca tttttcagcg
     3541 tattctttaa tcgctccacc tgcttgtttt tttgtcccga caaaaagtat agtttttcct
     3601 tcggcagcag cgtcacgaac gatattatag gtatatctaa aatatcttaa agttttttgt
     3661 aaatcaatta cataaatacc ttttctctcg ccaaaaatga attttttcat ctttggattc
     3721 cagcgtcttg tttggtgtcc aaaatgcaca ccgcattcta ataaatctct catactaacc
     3781 atgagtttct ccttataaat ttagctttat tcctccacat cccttaattt acacaagcta
     3841 aaaaggattg atgcgtgtga aatgaagcta agattttatc aaatttaagt ttagttttta
     3901 cttatatatg tagtccttgg taagacttag attattattg atttcttttg tgattaaaaa
     3961 ttgaaacaaa tccacgcttc caacacgaaa agcagaggca caagaacgaa ggtacaaatc
     4021 ccacattctt ataaattctt catcatattt ttcccttacc ttgtccaata cttcgttaaa
     4081 attttcatcc cataaatcta aagtttttgc atagtgcatt cttaaacttt ctgctaaaag
     4141 aagatgaaaa tcccactcac tcatagcact tacaacctct cttaaagaag gtaaatatcc
     4201 tcctggaaaa atatatttat ctatccaagc atttgttttt ccttcaaaca tggctaaaat
     4261 agaatgtaaa agcatagaac ctccaggttt taacacttgt tttactttca tgaaataaag
     4321 tcctaaattc tctttgccta catgttcaaa catacccaca gaaacaactt tatcaaaata
     4381 attttcaaat tctaaatctt gataattttg aagtcttatt tctattttat cttcaagacc
     4441 aagttctttt actctttcct tagctttttt acactgctcc tctgaaatag taattccaac
     4501 aaccttaact ccatactttt gagccgccat aatagaaagc caaccccagc cacaacctat
     4561 atctaaaagc ttttctcctt cttttaaatc aagtttttta agagtatgtt ctattttgtt
     4621 aatttgagct tcataaagag tattattagg ctctttaaaa taagcgcaag aatagctcat
     4681 agtatcatca agccaaagct tataaaaatc attacctata tcataatgac ttttgatatt
     4741 tttactttcc tgtttttggg ctattttact caagatatcc tctgtatttt ttaaaaaacg
     4801 cttatttgaa aaataataca aaactttagc tatttcatca taatcacctt ctatttctag
     4861 tttagactcc atataatgtt ttgcaaaaac taaactcgta tcactaaata attttaaaaa
     4921 aggtattttt tctttgaaaa ttaaagaaaa tttagcaggc tgattaccca catgaaattc
     4981 ttcttgatcc caaaatacaa ttctaaaatt tccataattc cattttgaaa gaataaattt
     5041 aatcatttg
//
LOCUS       DARATF010000103         5047 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.103, whole genome shotgun sequence.
ACCESSION   DARATF010000103 DARATF010000000
VERSION     DARATF010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.103"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..303)
                     /locus_tag="SB502_001560"
     CDS             complement(<1..303)
                     /locus_tag="SB502_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0434976.1"
                     /translation="MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIF
                     NFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIN"
     gene            complement(368..817)
                     /locus_tag="SB502_001561"
     CDS             complement(368..817)
                     /locus_tag="SB502_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEG0434977.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM"
     gene            complement(944..2164)
                     /locus_tag="SB502_001562"
     CDS             complement(944..2164)
                     /locus_tag="SB502_001562"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEG0434978.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNL
                     IDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLDIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCNATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            complement(2158..2982)
                     /gene="galU"
                     /locus_tag="SB502_001563"
     CDS             complement(2158..2982)
                     /gene="galU"
                     /locus_tag="SB502_001563"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEG0434979.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGRPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEVQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            complement(3064..5037)
                     /gene="acs"
                     /locus_tag="SB502_001564"
     CDS             complement(3064..5037)
                     /gene="acs"
                     /locus_tag="SB502_001564"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEG0434980.1"
                     /translation="MLNQNNQELFKPSKEFSCNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQAFEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYISPTAIRMLHADAPDEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGGTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFY
                     DKNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSKVVETIVKLAKAEFE"
BASE COUNT         1624 a          978 c          648 g         1797 t
ORIGIN      
        1 gttaattttt tctaaattag ggataaaatc caaattataa aggcaaagaa ttttaatttg
       61 taaattttca ttcagaaaat cagcaagtct ttctaaactt tgtttttcaa agcgtgtatc
      121 atataaatct aaaaacaaaa tttcacttgc tttaaattga gataaaaaat taaaaataag
      181 tgttttttta ccacaaaatc gtgggccttt tatgataata tttggttttg aaatttgatt
      241 ttttctttca taacttactt caaatttagg gtggttttca taaaaaaaat taagtacttt
      301 caattttatc ctttaaaaaa ggatattata acctagtttg tataattggg gcataaagcc
      361 ccttaaatta cattttgcaa gcaccttgta aagtagcgcc tatcatccaa agactttttt
      421 catattttgc gatattttct tgtgcaaaag cagctgttgt agtatcactt tctttttctg
      481 ctgcttcatt gagtttttta aattctgcta aaagatattc ataatcttgt ttgatcagtt
      541 ctatgacttc aagcggagta aagcaatctt ttgcaacttt tggacttttt gcattttcca
      601 ttaaaacttt ttggcaagtg atagcttttt cgccaagttg taaaactctt tcagcacaac
      661 tatcaaaaag ttctgccatt tcttcataag ctttttctgt gtactcgtgt atagaaaaaa
      721 attgcaaacc ttttacattc cagtgataat tatgaaattt aacccataga tgatgagcat
      781 ctgcttgcat ttgtaataat tgttttgtaa ctgacatgat tgactccttt ttttaatttt
      841 taaaattata acataaaatt cttaaataat aattattatt aattaaaaat ttttattata
      901 attttaactt aaaattatta tactcttttt taatgaattt tgattaagaa tttaatatat
      961 tttttaagat caactttcca acttccacac caggttgatc ataggtgtta atccctagca
     1021 taacaccgca agttgaagta aaaagttcat aataatacat caaatatccc gcatgccaag
     1081 catcaagttt ttcaagttct atcacatcaa cactcaaatt ttcagcgatt aaagcgtgca
     1141 tagttgcatt acattgagcg tttaaaagtt cgtgaagatt gactttatta cttaaagaat
     1201 ctaaaaattt aaaatgaata tcagggataa taggtgcttt ttgagcgtct ttgattttta
     1261 aaaaagttac agttttattt ttaggtccat ccataatgag ttgtaaaaaa ctatgctgat
     1321 ctcttgctcc aatgagtgca ataggagtta aacctatacg tttatagcct tgctttttac
     1381 ctaaactttc agcaataagc tggatatacc attcattaaa gcctttaaaa gcatcactat
     1441 atgaaaaaag tacattgata ttggcatttt tgtgtgtgca ataatgatag gctttttgta
     1501 aaatttcatc ttttttatga gtaaaaaaat cttcaaaaca agctttagct ccttctaaaa
     1561 gagctttggc attatagcca caaaaacaaa gcggaactat acctacggct gaaagtatgc
     1621 taaaacgacc tcctacattt gcagggataa aaaagcattt aatatctaaa ttttcacctt
     1681 cttgatgaag ttttgaatcc ttatcggtaa taaaaacaaa gtattttttt aattcttgca
     1741 tatcaagttt aaaatgttca ataagaagtt taaaaagcga tacaacttct atagtactac
     1801 ctgttttgct gatgattaaa aacaaacttt cctcaagctt gattttttct aaagtcttat
     1861 taaaagaatg tgaacttgtg ttatcgagta taaaaagttc tctttgattg cttttttcat
     1921 taaaaagcat atcacgcaag gcttttacac cacaacttga accacccatt cccactaaaa
     1981 cgatattttt tatgtgttct ttgtctttga taaaagccaa actctcatcg attaaattca
     2041 aacttgtatc aataagatga taatacccta tatctccact ttttacctca tcattaatac
     2101 gatttgcata agaacttata gtgtgaattt cactttgctt aaaaaaaagt gtattattta
     2161 acatttactt ttctcgtaaa aataatttgt cgcttctaca aagccttcta cacttccaca
     2221 atcaaagcgt tttccttgaa atttataagc taaaaccata ccattagttg cttgagttaa
     2281 aagcgcgtcg gtaagttgga cttcaccatt ttttcccgct ttagtatttt ctaaaattcc
     2341 aaaaatatca ggagttaaaa tatatcttcc tatgatagca agattacttg gagcttcatc
     2401 aggacttggt ttttctatca tagaattaac catgataaga ttttcttcta caaaatttcc
     2461 agaaattact ccatagtttg aaacttgctc ttttggtact tccatcacag ctatgatggt
     2521 gcagcgatat ttttcataaa tttttaccat ttgagccata acatttaagc cttcttcatt
     2581 aacacacaaa tcatcagcca aaattacgcc aaaagcttca tcgccaacca aaggtctacc
     2641 ttttaaaacc gcatcaccta agcctttcat ttgattttgt cttgtaaaag taaaggtaca
     2701 acgattgatc aaagagcgaa tttcatcaag taagtattct ttttttgtac ctgaaatttg
     2761 atgttcaagt tcataagaaa tatcaaaata atcctccaaa gctctttttc cacgccctgt
     2821 gacaaatccc atattttcca ttcctgcttc taaagcttca tcaactccat aatggatcaa
     2881 aggcttggtt aagataggta acatctcttt aggtaaagtt tttgttgcag gtaaaaatct
     2941 cgtcccataa cctgccgcag ggaaaataca agtttgaagc ataaaaattt ccttttattt
     3001 ttttatcatt atagcttatt tttatgaatt ttcatgcaac taggcaaagt tctttttacc
     3061 ttgttattca aactctgcct tagctaattt aacaatggtt tctactactt tagaatcttc
     3121 aagtgttgaa atatcctgtt tgatttcttc acctcttgct atagttctta aaattcttct
     3181 cattatttta ccacttctag tttttggcaa acctggagta taaagaattt tttctatttt
     3241 agctataggt cctatttcta ctcttaaaat gtcattaagt tcttttaaag tttctatagc
     3301 tccgccaaga tcacaactgg atgcaggact taaaaccaca aaagcaaaca atgactcgcc
     3361 cttaatcgta tccaaaatac tcactacagc tgattctgct acacttggat gtttagcaat
     3421 agcgctttca atttcagccg ttcctatacg atgtcctgca acattaacca catcatctgt
     3481 tcttcctgtg atggtaatat aaccattttt atcataaaaa gcaccatcgc cactaaaata
     3541 tacagctttt ccatcttttt tagcttgaga aaaataactt tctatatagc gttcatcatt
     3601 accccaaatt ccacgaatca tcgaaggcca aggtttggtt atacaaagca atccatcttc
     3661 accttcatct tttttattgc cttcttcatc aataacttct gcaaaaattc ctggcaaagg
     3721 caaggtagca caacctggtt ttaaaggagt agcgcctggt aaaggcgtga tcatatgccc
     3781 acctgtttct gtttgccacc aagtatcgac tataggactt ttagttcccc ctatttcatc
     3841 ataaaaccac ttccaagcac taggattgat aggctctcca accgttccaa gcacttcaag
     3901 cgtacttaaa tcatattttc ttggctcatc aggtgcatca gcatgaagca ttcttatggc
     3961 agttggcgaa atgtagaatt tgcttatttg atactcttct atcattctcc accaacgccc
     4021 agaatttgga taagtaggag ttccttcatg cattatagtc gttgctccac atgctaaagg
     4081 cccataaact acataagtat gtcctgtaat ccaacccaca tcagcactac accaataatt
     4141 atcataatct ttaatatcaa aaacccattc catagtcatt tgtgcccaaa gtatatatcc
     4201 tgcacttgca tgcataactc cttttggctt acctgttgat cctgaagtgt aaagcaaaaa
     4261 caacaaatcc tcactatcca taatttcggg ttcacactta taagactcat ttttcacaag
     4321 ttcgttataa acatagtccc ttcctttaat atattctata ggctcattat tgcgtataac
     4381 tataagtact ttttctacac tttcacaccc ttcacttaaa gccttatcta ctgcaggttt
     4441 taacatataa ggtttgccac gacgaaaagc accatcagct gttactacaa gtttagctcc
     4501 tgcatctata atcctatctc gcaaagcttc tggagaaaat cctccaaata ccacactatg
     4561 aatagcccca atccttgcac aagctaacat tactatagct gtttctggaa tcataggcat
     4621 ataaattaca accctatcgc ctttttttac tccgaatttt ttaagcaaat tggctgcctt
     4681 gcaagtttca tgcaataatc ttctataagt ataaacttca taatccccca tttcaccttc
     4741 aaaaatcaaa gcagctttat tgcgtcttgt tttcatatga cgatcaagac attgataact
     4801 tacatttaaa gttccacctt caaaccattt ataaaatgga gctttatcct catttagcac
     4861 tcttgaaaaa ggcgaaaacc actcaatctt ctcaaatgct tgtcttttcc aaaaaccttc
     4921 aaaatcttcc ttggcttcat cgcataaatc atagtattcg cataaatttt ttatacgagc
     4981 attacaagaa aattctttac ttggcttaaa aagctcttga ttattttgat taagcataaa
     5041 aactcct
//
LOCUS       DARATF010000104         4929 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.104, whole genome shotgun sequence.
ACCESSION   DARATF010000104 DARATF010000000
VERSION     DARATF010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4929
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.104"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            218..1204
                     /locus_tag="SB502_001565"
     CDS             218..1204
                     /locus_tag="SB502_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0434981.1"
                     /translation="MNKFSIVLTLLLCGSCALALDPNLEKTKSATGIDLPTAKWNLPK
                     ALNEDGTIDETKMPKNSEYSKMVILGNKILNETSKYVGPQAKDPKKRFAGNNLSCSSC
                     HANGGSVQNQSGFVGIWARFPQYNARGDKVITLADRINGCFERSMNGKRMPSDAPEMK
                     AMLTYMQWLSQGVPVGAKIEGQGLKKIDFISRAADPKKGKAIYMDKCAVCHQENGLGL
                     KNEDSAGAYYLYPPLWGDDSYNTGAGMYRLIKAASYIKENMPQGAPDLSLEDAYDVAA
                     YMNSQARPIKANRDKDFPDRKVKPLDMDVEPYDDSFSTTQHRYGPYTNMIKK"
     gene            complement(1238..1879)
                     /locus_tag="SB502_001566"
     CDS             complement(1238..1879)
                     /locus_tag="SB502_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEG0434982.1"
                     /translation="MRKFFCKFVLALVFYSSFALANNSFITLNPSLPNSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFAFAQYKDEQNG
                     KDASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
     gene            complement(1965..3403)
                     /locus_tag="SB502_001567"
                     /pseudo
     CDS             complement(1965..3403)
                     /locus_tag="SB502_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315485.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
     gene            complement(3439..4239)
                     /gene="dsbI"
                     /locus_tag="SB502_001568"
     CDS             complement(3439..4239)
                     /gene="dsbI"
                     /locus_tag="SB502_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HEG0434983.1"
                     /translation="MSYIKMKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWAPSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIA
                     YVLDKNKSNAKIFALVIVALVLVLKFIGESKNPNQNIASLNQVVLRYS"
     gene            complement(4236..4898)
                     /locus_tag="SB502_001569"
     CDS             complement(4236..4898)
                     /locus_tag="SB502_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEG0434984.1"
                     /translation="MKFPVKLARSIVVCAFLAGISASALSEGKEYVILKNPIANADNS
                     LIEIFSYHCTHCYDHHKFNTMGKVKEKLPNLTYKFYPVSSMGDYGRQANEIFAFATFK
                     DGVNKIDPTDKNSLTHKVAEAYFNAYFKKKQRWENGKNPEAFYSVGLKAMNVSKADFE
                     NFLKTPETAELLKSYEIANPISQNYGTPAFVVNGKYQIVPSAINSPEALIEITKELSK
                     QK"
BASE COUNT         1710 a          834 c          707 g         1678 t
ORIGIN      
        1 tttttcatta acctaacctt taaaaatatt gcaagatttt attatagcga aaaaacttta
       61 tttttgcttt aaatatttat aagttctatt ttaaatataa atgaatatta ttttaaggtt
      121 taaagctttt ttcttaaaat gtaattaggt tttattgact ttttctaaat aaagtcttat
      181 actgaattta aattacgcaa aataaggagg aaaattgatg aataaatttt ctatagtttt
      241 aactttgttg ttatgtggaa gttgtgcttt agccttagat ccaaatttgg aaaaaaccaa
      301 gagtgcaaca ggtattgacc tgcctactgc taaatggaat ttgcctaagg ctttaaatga
      361 agatggcacc atagatgaaa ctaaaatgcc aaaaaattca gaatatagca aaatggttat
      421 tttaggaaat aaaattctta atgaaacaag caaatatgtg ggtccacagg ccaaagatcc
      481 taaaaaaaga tttgcgggaa ataatctttc ttgttcaagc tgtcatgcta atggtggaag
      541 tgtgcaaaat caatcgggtt ttgtaggaat ttgggcaaga tttccacaat ataatgccag
      601 aggagataaa gtaattacct tagcagatag gatcaatggc tgttttgaac gctctatgaa
      661 tggtaaaaga atgcctagtg atgcgcctga aatgaaagcc atgctaactt atatgcaatg
      721 gttatctcaa ggggttccag taggagctaa gatagaagga cagggactta agaagataga
      781 tttcatctca agagcagctg atcctaaaaa aggtaaggca atttatatgg ataaatgtgc
      841 cgtttgtcat caagaaaatg gcttagggct taaaaatgag gatagcgcag gggcgtatta
      901 tctttatcca ccactttggg gtgatgatag ttataataca ggagctggaa tgtatcgtct
      961 tatcaaagct gcttcttata ttaaagaaaa tatgcctcaa ggtgcgcctg acttaagtct
     1021 tgaagatgct tatgatgtag cagcttacat gaattcacaa gctcgcccta ttaaagcaaa
     1081 tagagataaa gactttccag atagaaaagt taagccttta gatatggatg tagaacctta
     1141 tgatgatagc ttttctacaa cccaacatcg ctatggacct tatacaaata tgatcaaaaa
     1201 ataattttaa ggcaattttt attgccttaa aaatttatta tttcatattg cttaattttt
     1261 taactagatc ttctaaatct tgcattgaat tgattgcgct tgggttaatt tgatattttc
     1321 cattaacaac aaaagcaggg gtgccatagg ttttagctat atcattagct ctttgaaact
     1381 cgcttaaaat ttctttagct tttggggtat ttaaaaaatt taatacttca tttttattta
     1441 cattcatagc ctttaaacct atgtcgtaaa attcatctaa atttgaaaaa tttctttgct
     1501 tgtttaaaaa ataagaaaca aaataaacat cagcaagttt atgagataaa ctatcagaat
     1561 aactcgcatc tttaccattt tgctcatctt tgtattgagc aaaggcaaaa agctcattca
     1621 tttctttgga aaattcccca ttcattaaac ttacaggata gagtttaaaa tgtaaatttg
     1681 gaaaagcttc tctcagtttt tcaagagttc caaatttatg atgattataa caatgtatac
     1741 atttataaga aaatgcttct attacactat tttcagagtt gggtaaactt ggattaagag
     1801 taataaaact attatttgct aatgcaaaac ttgaataaaa tacaagagct aaaacaaatt
     1861 tgcaaaaaaa tttacgcata ttatatcctt ggttaaataa aattttcaaa gataatttta
     1921 tttaaaaaaa ataaataagc ccaaatttat ttttgggctt attgttattt tttaggattg
     1981 aatgcttgat caacactaaa aggcattgct tgataacccg tgcctgaacc gctaaattga
     2041 atttgaaccg aaggctcctt agcaccccag ttaaattcat caatttcagg ttttggttcc
     2101 ccaagactta cacctttgct aagatcaaaa gccattccca gctgttgcgc tataaaccat
     2161 aatagaatct ttatctggtt catattgagt taaagaagtt acaggataaa accattcatt
     2221 gccattttta tctacaggtt gcaataaata tttttgaaat tctttattcc accctttata
     2281 tgcgcccaat tcctacctat acctgctata tctccaaatt tgtcgctttc atccattttg
     2341 gcaagctctt catcgcttaa agttttaccc actttacttg catctatatt taaacacact
     2401 gcactttgat ctaaagtttt gataatagta cttctataag gatctaaaat cttatacaat
     2461 ctccaatcat caacaacatt accatcctca tctacttcta taatagtatc acacactgtg
     2521 cgtacatgct tactatcttg gacgcaaagt atttgttgaa gaaataatgc ccattttttg
     2581 catattgtcc atagcatgag aaaaaatcta tatagacagc aggtaatttg cgattgaaaa
     2641 tttctcttcc cagacatcgt attttacata tctttgacca aatccccaag ttaaagctcc
     2701 atctttgttt tgacgaaaac ttatcataat tccacgattg taaatattac cccagttcat
     2761 tagtttattg ttatcataat accatctgat ttcacccttg gtatcttata ataaagacat
     2821 ttgaattttc atcccattcc atagcaccac ctacaagatt attccataca gattatgagt
     2881 ctttgccaga ttattttcca ggagcattat ttactaaata tagcctatct gaaaattttg
     2941 gatccatttt taatactttc acattttcaa aaagagttcc tctttgatca gtgccttccg
     3001 cttggttcta tgctagccca tggagttgta attttataaa tctcatcaat gactttttga
     3061 cttttaccat ttgcggtttt agtataactt acctttacta taagaaggat aaagtccaaa
     3121 aataggaatt ccaccatacg tcttagccat tttagaattc acattattaa gaaatagttt
     3181 gaccatttga tttttttata tcgcttaaga cataaccatt attcatgata atagcggtca
     3241 aaggagacaa tccataagga ttcattttaa tcatacccat ttgtccttga atttgccaat
     3301 ctattttcac tccactagga ccacccatgg ccattaaagc attaggtgca agtagggtag
     3361 aacccgccaa aattgccatg caaagagttt tgctaagtct catgatcaat cctttaaaat
     3421 tatttaagac atcctatttt aagagtatct taaaacgact tgatttaaac tagctatatt
     3481 ttgattcgga ttttttgatt cgcctataaa tttaagcacc aaaaccaaag caacaatcac
     3541 caatgcaaaa attttagcat tagatttatt tttatctaaa acataggcta taaacattgc
     3601 aaaaagcacg acaaaacaac ataaaaatgc tataagacag caaattgcca tattcataaa
     3661 ctttaaacta ggaatcaaat accaaccatt actataaagc ccattttcaa aatcaggtgg
     3721 agttcctata aaaaattttt gaaaagcatt aagatgatta taagcatttt ctggaactac
     3781 aggggtatcc atcccgcatt ctcctgttgg caaaaaccaa ctaggagccc atttatacaa
     3841 aggtaaatta aatggataaa taggaatttc acgacatcca tctacgcctg caaaaggatt
     3901 ttcagaatga accacttcat ggatatgatt taaagttaga caatgctcca agccaagcca
     3961 aattccataa aaagctaagc tataagaaaa aatttttata atattatttg cagggttgat
     4021 taatgcaatc ataccaccta tagccataac aagcatatca aatcttatat acacacattg
     4081 ttcacaaggt ttcataaaaa gatattcttg aaataaaaaa tgtgctatac aagtaagtcc
     4141 tatagtaact ataatcaaaa tcaaccaagg tttgcgcgta tcttgccatt tggaaagtga
     4201 aaaatttctg caattatctt tcatttttat ataactcatt tttgcttgct aagttcttta
     4261 gtaatttcaa tcaaagcctc tggagagttg attgcacttg gaacgatttg atattttcca
     4321 ttaacaacaa aagcaggggt gccataattt tgcgaaatag gattggcaat ttcataactt
     4381 tttaaaagct ctgcagtctc tggagttttt aagaaatttt caaaatcagc tttacttaca
     4441 ttcattgctt ttaaaccgac actataaaaa gcttcaggat ttttaccatt ttcccatctt
     4501 tgttttttct taaaatatgc attaaaataa gcttcagcaa ctttatgagt taagctattt
     4561 ttatccgtag gatcaatttt atttacacca tccttaaatg tcgcaaaagc aaaaatttca
     4621 ttagcttgcc ttccataatc tcccatagaa cttacaggat aaaatttata agttaaatta
     4681 ggtaattttt ctttaacttt acccatggta ttaaatttgt gatgatcata acaatgagta
     4741 cagtgataag aaaaaatttc aatcaatgaa ttatcagcgt tagcaatagg atttttaaga
     4801 attacatatt ctttaccttc acttaatgcg ctagcactta tacctgctaa aaaagcacat
     4861 acaacaatag atcttgctaa ttttactgga aatttcatta ccctctcctt gaaatttggt
     4921 tttgataaa
//
LOCUS       DARATF010000105         4867 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.105, whole genome shotgun sequence.
ACCESSION   DARATF010000105 DARATF010000000
VERSION     DARATF010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4867
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.105"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1531
                     /gene="mrdA"
                     /locus_tag="SB502_001570"
     CDS             <1..1531
                     /gene="mrdA"
                     /locus_tag="SB502_001570"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEG0434985.1"
                     /translation="LTNLFPDLNASKLAEIYKRNDSYYNQDFIKVVDFIPYDEIIPHY
                     SELNLNKTIKIDPVVKRKYPFGKLASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIE
                     RYYNDILQGEKGTRVYKVNALNQEVEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNA
                     GAAIIMNVNDGSILAAGSFPEYDLNPFVTGISFKDWDELSNSLDHPFTNKLINGYYPP
                     GSVVKMGVGLSFLNSKNISPSTHYVCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSC
                     DVYFYNGSLQVGIDQISETLSRIGFGAKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQG
                     DTLNTAIGQGNFLATPMQIARYTAQIAKGGEVIPHFLKSIENNNTTIENQMDENKKEI
                     FTLFEKSQLPYIRDAMYAVANEQGGTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRV
                     DEKQFEYYTRSHAWLTSYAPYSKPKYVVTVLLEHGGRNITSGATVAKIYQKMIELGYF
                     K"
     gene            complement(1652..3442)
                     /locus_tag="SB502_001571"
     CDS             complement(1652..3442)
                     /locus_tag="SB502_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEG0434986.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDAKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLQINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     CSYSRKEKLALVRQKMKNLNATSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KVLLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLMNS
                     LDKSVKIIQEINPSTHLKAAKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIENKELIS
                     ELDIDTKASEFRAQSKYYISDSFATIAGFNKNAAYPHYKATKDSFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDVAMPLLDAIARV
                     PLWKEQIDYMHGTGHGVGYFLNVHEGPQVLSYLSPMLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDFPKALVWLEKRTKAIF"
     gene            complement(3439..3813)
                     /locus_tag="SB502_001572"
     CDS             complement(3439..3813)
                     /locus_tag="SB502_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-/tripeptide transporter"
                     /protein_id="HEG0434987.1"
                     /translation="MMMTFASQNLINNNGLPISMAWIIISIFFLTLGELCVSPIGLSI
                     MAKVAPDLIKNQIMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYQCMWILLGAV
                     IILLILKKPINKILKINIKEKI"
     gene            complement(3840..4091)
                     /locus_tag="SB502_001573"
     CDS             complement(3840..4091)
                     /locus_tag="SB502_001573"
                     /inference="COORDINATES: protein motif:HMM:NF013050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434988.1"
                     /translation="MNNFNCFILCGHFFWSTFEQKPTAYNLFAQDFTNRNIFDWKIPT
                     NWFQSFNPIFIIILAPIASYIWIFLEKKIYIFLPLENLL"
     gene            complement(4193..4669)
                     /locus_tag="SB502_001574"
                     /pseudo
     CDS             complement(4193..4669)
                     /locus_tag="SB502_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865666.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT         1660 a          731 c          777 g         1699 t
ORIGIN      
        1 acttacaaat ttatttcccg atttaaatgc tagtaaatta gcagaaattt ataagagaaa
       61 tgattcttac tataatcaag attttattaa agttgtagat tttataccct acgatgagat
      121 tattccgcat tattcagagt taaatcttaa taaaacaata aaaatagatc ctgttgtaaa
      181 aagaaaatat ccttttggaa aattggcttc gcatattatt gggtatgtag gtaaggcaaa
      241 tttgcaagat gttcaagaaa atgaaatagc aaaactttct aactatacgg gaaaaagcgg
      301 tatagaacgc tattataatg atattttaca aggagaaaaa ggaactaggg tttataaggt
      361 taatgcctta aatcaagaag tagaacagct ttcttacact cctgctatgt ctaatgatat
      421 agaacttacg atagatatag agcttcagtc ttatttaact tcattgtttg aagggaatgc
      481 tggagctgct ataattatga atgtaaatga tggatctatt ttagctgcag ggagtttccc
      541 tgaatatgat cttaatcctt ttgtaacagg gatttctttt aaggattggg atgagctttc
      601 aaatagtctt gatcatcctt ttacaaataa acttataaat ggatattatc ctccaggttc
      661 tgttgtaaaa atgggagtag ggctttcttt tttaaattct aaaaatatta gcccgtcgac
      721 tcattatgtt tgcaatggaa gcattgagct tggaggcagg ttttttagat gttggaatcg
      781 atcaggccat ggacctgtgg atttaaaaca tgcgataaaa tatagttgtg atgtttattt
      841 ttataatggc agtttgcaag ttggaatcga tcaaataagt gaaactttat ctcgcattgg
      901 ctttggagcg aaaacagggg tagatttacc tagtgaattt gtaggaactt taccaagcaa
      961 agaatggaag atgcaaagat atagacaatc ttggtttcaa ggtgatactt taaatacagc
     1021 tataggtcaa ggtaattttc ttgcaacacc tatgcaaatt gctagatata cggctcaaat
     1081 cgcaaaaggt ggagaggtta tacctcattt tttaaaaagc atagaaaata ataatacaac
     1141 tatagaaaat caaatggatg aaaataaaaa agaaattttt actttatttg aaaagagtca
     1201 attgccttat ataagagatg caatgtatgc tgttgctaat gagcaaggag gaacctctta
     1261 tcgttatttg cataatcttg atgtgaaagt tgcagcaaaa acaggaactg ctcaggttgt
     1321 gggattttca cagacagata aaaatagggt cgatgaaaaa caatttgagt attatactag
     1381 atctcatgcg tggcttactt cttatgctcc ttattctaag ccaaaatatg tagttaccgt
     1441 tcttttggag catggtggga gaaatattac ttcaggggca actgtagcta aaatttatca
     1501 aaaaatgatt gaacttggat attttaaata atttttagtt gtaaattgag tttttcaaaa
     1561 aaaacttttt tagcaattgg tttaaaaacc ttgtattaaa caaattataa gtttaataca
     1621 aggaaaattt atctatgtta acaaaagtat cttaaaagat ggcttttgtt cttttttcaa
     1681 gccaaactag agcttttgga aaatcaccta gcttaggaga aagtttttca aatacttctt
     1741 tgtggtaatt gtttaaccac tctttttctt tttcatctaa catttttgta tcaatacaag
     1801 atatttcaaa aggacaaaga gtaacaggtt taaagtataa aaattctcca aaatctttat
     1861 ttttaggatt ttctactttg gtatgaataa ctaaattttc aagtcttata ccccatttgc
     1921 ctactttata aatacctggc tctatggaag ttagcatacc ttctttggct tttgtttttt
     1981 caagcatagg ggatagataa gataaaactt gtggaccttc atggacattt aaaaaatatc
     2041 ccacgccatg tcctgtgccg tgcatatagt caatttgttc tttccataaa ggtacgcgtg
     2101 cgattgcatc aagtaagggc atagctacat cttttggaaa aattgcacta gaaatggcaa
     2161 tatgtgcttt taaaaccaag gtatagtcat gaatttgttc tgcattagcc tttcctatag
     2221 gcacaacgcg tgtaatatct gttgtgccgt ttttatattg tccaccagaa tcaataagta
     2281 aaagcccatc ttttttaaga taagcaaaac tgtcttttgt ggctttataa tgtggatatg
     2341 ctgcgttttt gttaaagcct gctatagtgg caaagctatc acttatgtag tacttgcttt
     2401 gcgctctaaa ttcgctcgct ttagtatcta tgtccaattc gcttattaat tctttatttt
     2461 ctatcgcttc ttcaagccaa gcaaaaaatt tacataaagc cactccatct tctatcatag
     2521 catcttgtat atgcgctatt tcttttgtat ttttagctgc ttttaaatga gtgcttggat
     2581 taatttcttg aatgattttt acgcttttgt ctaaagaatt catgagtaaa gcggtcattt
     2641 ttgaaggttc aataagcaaa tttgtatttg caagtttttc aagctccatg atgatttcat
     2701 cataattttt aagccaaaac ccatctaaat ttaatttttt ttcaagttct gaatttactt
     2761 ttttctgatc aacaaaaagc aaaactttgt cttccaagat tagtaaatga cttaaaaata
     2821 caggattgta atttacatca ttccccctta aatttgtaag ccaagctata tcatcaaggc
     2881 tggagattaa atgagaagta gcatttaaat ttttcatttt ttgacgcact aatgctaatt
     2941 tttcttttct tgagtaagag cagtattcta gttcgtgttc ataaattttt tcttgtggta
     3001 aagtgggacg atctttccaa agtggactta tcaaatctat atgttttaaa tttgccttgc
     3061 aattaatctg taaatctttt tgtaaagata aaggtaaaag tgcaaaatcg atgcctaaaa
     3121 tttgatcttc gcttaaattt ttttccaacc atttggtaaa agtattttta gcatcttgct
     3181 tttgtaaaag tatgccacta ccttctaatt ccttttgtgc ttgaagccaa tatcttccat
     3241 ctacccacaa aaagccctct tcttgcgtga taagaactgt tccaacagaa cccttaaagc
     3301 cactgataaa gactctgttt ttgtaatatt ctggtaaata ttcgctcaaa tgcggatccg
     3361 cacttaagat gagataggcg tcaatattat tttctttcat taatcttcta agttctaata
     3421 ctctttgttt gtaaatactc atattttctc cttaatatta atttttagta ttttattgat
     3481 aggttttttg agtataagta aaattataac agcaccaagt aatatccaca tacattggta
     3541 aaataaattt ggcaaataag ctatattttc ttcacttgct ttaccaccta tgaatccagc
     3601 taaagcattg cctaatgcac ttgctacaaa ccaaagtccc atgatttgat ttttgattaa
     3661 atcaggggca accttagcca ttatagagag tccaatagga gacacgcata gttccccaag
     3721 tgttaaaaag aatatactta tgataatcca agccatggat attggtaaac cattgttgtt
     3781 tattagattt tgtgaagcaa aggtcatcat cataaaacca ataccggcaa ataatattcc
     3841 taaagtaaat tttccaatgg aagaaaaata tatatttttt tctctaaaaa tatccaaata
     3901 taacttgcta taggagcaag tatgatgata aaaattggat taaaagattg aaaccagttt
     3961 gttggaattt tccaatcaaa aatatttcta tttgtaaaat cttgcgcaaa aagattataa
     4021 gcggtaggtt tttgttcaaa agtactccaa aaaaagtggc cgcaaagaat aaaacaatta
     4081 aaattgttaa ttgctgtttt tctcttttat ttaaggtttt aaaaacaaaa aaatatatga
     4141 aataaattac caaacatagt aaaattacaa ttagaagttt ttttgatagt attatgggat
     4201 taatatctgc aagattaata aaaattagaa aaaatccaat aatacttaac aagcttatac
     4261 ttagtataag agttaaattt ttactttttt taaatggttg ttcccagttt tgctttaaag
     4321 tacaattttt atgaaattct tcaagttcag gggtagcttt aaaatataaa ataagcaaag
     4381 agattagcat acctaaacct cctatgccaa atcctaaatg ataattccat tttgcttgaa
     4441 caaaaccaca tataagagga gcaatgaatg ctccaatgtt aattcctata taaaaaatcg
     4501 tatagccagt atcgcatctt gtatcatttt gtttatataa cattccaact gttacagaag
     4561 cgttagtttt aaaaaatcca gtaccaataa cgataaaagt aagccctagg aaaaacatag
     4621 gtgtgcttaa aatagataag gctatgctaa tatgtcctaa agttataata aaagaaccta
     4681 gaaataaagc cttttttgcc ctgaataatt atcagtaatc cagcctccag gaagcgtgct
     4741 gctaaataca agctcctgca aaaataccat aaaagcaaat ctttcccaaa gttctaccat
     4801 tgatagagag aataaaggct tgcgatgacc taggaaattt gtatcgagtt tttgtatttc
     4861 ttgttta
//
LOCUS       DARATF010000106         4775 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.106, whole genome shotgun sequence.
ACCESSION   DARATF010000106 DARATF010000000
VERSION     DARATF010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.106"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            397..1311
                     /locus_tag="SB502_001575"
     CDS             397..1311
                     /locus_tag="SB502_001575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434989.1"
                     /translation="MEALNQKNSLNIRLLSSNNILLHNQEFKLYEIAQGNKNEIKTIF
                     TTNRMGEAHLNASEIFSKEAQSFELILNQSSVYKNKPIYNHRFLLRSYEYGHWCEIKF
                     ERKADKGSINSIRLKSKEFTLENNEKIVRNFYTFGDIVEFEAIYEDTKIKEEQIKWGY
                     VFIQDKNTLDKLNKNQLTNDKKESSLFDEEILKDCFYIEKEEDKALLSSSIIYRHLEN
                     NKAYCGKHLSLQLPNPKDTQEQKTLLVFAYKEIPNYNASYLIRINDYPQITIDCTLAE
                     TLRAHTNKDEISRLGWGGGKLYLSKIMA"
     gene            1250..2356
                     /locus_tag="SB502_001576"
     CDS             1250..2356
                     /locus_tag="SB502_001576"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434990.1"
                     /translation="MKSQGLVGGGVSYICQRLWHDNPSDAKELKDLTFRSSTSQDFID
                     TIPNETMKTIVKEILPRVEMQQLKTDNTKSRDKARFYAELDWDSFYMKFPIMQELKGE
                     YMNLKKLFGEESDFQKQFEDFLNDTLLDIKNIKNTQEYTMALNIQAMKENKTKNAEVF
                     KLYKKEETLPETHKAIKDLQKPSDIIDNSLYFQRFDIKNDVFLPHLDLSKFDAFSLQN
                     SIQHEKEVLDKFHSNPKYKQNFALYSIAGAFNILYIPSLIQITRVTRFYNYHSLYAAC
                     KKVRAFIIDTVNFNNNGSDQPIGAWDYEKVGFDLYNSIMQYRNTKFHFKYTSPKSFLF
                     PLYNSDFLKTKQYFNLGLDFFLYSSIFLDIVLEE"
     gene            2407..2657
                     /locus_tag="SB502_001577"
                     /pseudo
     CDS             2407..2657
                     /locus_tag="SB502_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910301.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2707..3714
                     /locus_tag="SB502_001578"
                     /pseudo
     CDS             2707..3714
                     /locus_tag="SB502_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902830.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
     gene            4209..4529
                     /locus_tag="SB502_001579"
     CDS             4209..4529
                     /locus_tag="SB502_001579"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0434991.1"
                     /translation="MHKIGNVAIVSLSSADKKGGSYTFTNKVSMQDFGENLYLDTEAN
                     GYEKQIKNSRENLYITNLKAYKEKEQQNTTDKIPYNETIFIRAYLNNEENFSSMRQLN
                     GHIV"
BASE COUNT         1962 a          649 c          717 g         1447 t
ORIGIN      
        1 gtgctaatca aaacactatt atccataagg atgagataag aaatgtgaag ggagaaaata
       61 aattattaat agaaaagtct ttaacccaaa caatagaaaa agaatttttc cttaatattc
      121 atcaaaattt atccgcccac atacaagata atacatcctt aaagtccaat tccatgcaga
      181 caaaggtaga ggaacaatat tctttagaat cagataattc aacttttgac tttcaaacag
      241 attgtgaagt aaaacaggca gtcaaatcct ccatcaagta ggtgatactc aaattgttac
      301 taagggagat tgtgttataa ttaaagcagg tggagttgaa gtaattatag attctaatgg
      361 gcttgtagtt agaggtggag agcttaggac agagtaatgg aagcacttaa tcaaaaaaat
      421 agtttaaata ttaggctttt aagttctaat aatattcttc tgcataatca agaatttaag
      481 ctttatgaaa tagcacaggg caataaaaat gaaatcaaga ctatttttac aaccaataga
      541 atgggggaag ctcatttaaa tgctagtgaa atttttagta aagaagcaca aagctttgaa
      601 ttaattttaa accaatctag tgtttataaa aacaaaccca tctataatca tagattttta
      661 ttaagaagtt atgagtatgg gcattggtgt gaaataaaat ttgaaagaaa ggcagataaa
      721 ggctctataa actctattag gctaaaatcc aaagaattta ccttagaaaa taatgaaaaa
      781 atagtgcgta atttctatac ttttggcgat atagtagaat ttgaagctat ttatgaggat
      841 acaaaaatca aagaagagca aattaaatgg ggttatgttt ttattcagga taaaaacacc
      901 ttagataagt taaacaaaaa ccaattaact aatgacaaaa aggaaagttc tttatttgat
      961 gaagaaattt taaaagattg tttttatatt gaaaaagaag aagataaagc cctattatct
     1021 tcttctatca tttatagaca tttagaaaac aacaaagctt attgtggaaa acatcttagt
     1081 ttgcaactac caaaccctaa agacacacaa gagcaaaaaa cactattagt ctttgcttat
     1141 aaagaaatac ccaattataa tgcctcttat cttataagaa ttaatgatta tccacaaatt
     1201 accattgatt gcactctagc agaaacacta agggcacata caaacaaaga tgaaatctca
     1261 aggcttggtt gggggggggg taagctatat ctgtcaaaga ttatggcatg ataatccaag
     1321 tgatgctaaa gaattaaaag atttaacctt tagaagctct acttcacaag attttataga
     1381 tactatccct aatgaaacaa tgaaaacaat agtaaaggag atattgccta gagtagagat
     1441 gcaacaatta aagactgaca acacaaaatc aagagataaa gcaagatttt atgcggaatt
     1501 agattgggat agtttttata tgaagtttcc tataatgcaa gagctaaagg gcgagtatat
     1561 gaatctcaaa aagctttttg gagaagaatc tgattttcaa aaacaattcg aagattttct
     1621 taatgatact ttactagata taaaaaacat taaaaataca caagaatata caatggcact
     1681 caatatccaa gcaatgaaag agaataagac gaagaatgca gaagtcttta agctatataa
     1741 aaaagaggaa acactcccag aaactcataa agctataaaa gacttacaaa aaccatcaga
     1801 tattatcgat aatagtttat attttcaaag gtttgatata aaaaatgatg tgtttttacc
     1861 gcatttagac ttaagtaaat ttgatgcatt ttcattgcaa aactccatac aacatgaaaa
     1921 agaagtttta gataaattcc actctaaccc aaaatacaag cagaattttg ctctatactc
     1981 tatcgcaggg gcttttaata tcttatatat accaagcctt atacaaatca cgagagttac
     2041 aagattctat aattaccatt ctttatatgc tgcgtgcaaa aaggtgcgtg cttttatcat
     2101 tgatactgtg aattttaata ataatggtag cgatcagcct attggggcat gggattatga
     2161 gaaggtagga tttgatttat ataattcgat aatgcaatac cgaaatacaa aatttcattt
     2221 taaatatacc tcaccaaaat cattcttatt tcccttatat aattcagact ttctaaaaac
     2281 aaaacagtat tttaatctag gcttagattt ctttttatat agctctatat ttttagatat
     2341 tgtgctagag gagtagttat tatgtttgaa gcgacaaaaa atacagagta aattaaagga
     2401 gttcttatgc aaaagttttt aatagtttta aggatttgtg ttactttaag tattaatatt
     2461 aatgctcaat ctccagaaga agctaaacct agctttaatt gtgctaaagc aaaaagcaag
     2521 gttgaaaaga tgatttgtag tgataaaagt ggggagttac aaaaacttga tagattatat
     2581 tctaaactct atttttcaat actaaagagt atccctaaag atacaaaaag gggcaaaaaa
     2641 caagagaaaa actgaaatat tttaatcatc ctgttatgag taatagaaat atatttcaat
     2701 gctattttgc aaaataatat aaaaatctac aaccaaaatc ctgaaaatat caaccaaaaa
     2761 cttaatgaaa atatggtttt tgagcttgca gataatgaag caaaagaagt taaaaaaatc
     2821 atttcttttg agaaaataca taatctaaga aaaaaacttc aaaaatggaa tgcaaactat
     2881 cttacttctt ttagtaagac agaattaacc aatccacaag agtttattcc cttattgtct
     2941 atttattatc agcgtccagc aagatttaac ccagagagtg gactcatctt gcttcaaaaa
     3001 gtccttaaag ataagaatag atttttagtg tggtttctgt gcgttattat gctgatatac
     3061 gacaattcaa aaacccttat tattctcgca gaatccaaga atctaacttt agagaagcca
     3121 ataccaagca aggactgaag ctgccagata aatacactta tctttctttt atgcaaactt
     3181 ataagaaatg caaagaagtt gatgaaaaaa acagagtatc tcttaagaga atacaataca
     3241 tattatacta aagacaaaca ctattattct tatgttgcta aagaagaatt tcagggtata
     3301 gctgatattc tcgctcccta tcttaattac ctaaacaccc tcactcaaaa aaattttagc
     3361 ttagataata tttattgtat tgctaattat tgtgagaatt taggcgctaa taaattggat
     3421 aatgttgcct tgcttaataa aactttaaga caaaagtttg aaaaactaga agcaaataca
     3481 ccccataata ttcttatcct ctatccaaat cccactccat ctattataca aatagaacaa
     3541 cctaaaaata cttttattac tttacttata ggagcaaaag caaaaataga ttgcactaaa
     3601 ttgatagaag atcaatgcga gctaatgtat ttaaaatatg atccaacgca agaagaacaa
     3661 caaacaagta atccgcaagc tttttcttgt agcacccaag aagaacttat ttaaaaaaaa
     3721 gaaaatgaaa tatactttaa agcagtaaaa aacaatatat catattttat taataaaaac
     3781 gatgggattt taaaagttgc tcttgctggt aatgaagaaa atgctataga attatacagt
     3841 tttgctaaag aaaatcaatt taaaattttg caagataaaa cctcaaagat gctaaaaatc
     3901 tatttaaaac tagaaagata tagtagcgaa gagattttat cgcatagagg gggaattttg
     3961 aattaacact taataatctt aagattttag atgaaaatgg aaacaattat gaaaccatca
     4021 ctaaagtatt tcttcataat tgtgagaata gaaggattta tgaaagttta aagttagaac
     4081 atcaagaagg catttataag agcagtttca agattgattt aattttagat acaaactctt
     4141 ctttttttaa aagggctaca aaatgtatta tagctacaaa aaccttagaa ggctttagca
     4201 caagtcaaat gcataaaatt ggaaatgtgg caatagtctc tttaagttct gcagataaga
     4261 aaggtggaag ctatactttt acaaataagg taagcatgca agattttgga gaaaatcttt
     4321 atttagatac tgaggcaaat gggtatgaaa aacaaataaa aaattcaaga gagaatttat
     4381 atatcacaaa tttgaaagct tataaagaaa aagaacagca aaatactact gataaaatcc
     4441 cttacaatga aactattttt attagagcct acttaaataa tgaggagaat ttttcttcga
     4501 tgagacaatt aaatgggcat attgtataaa aaaagaagag gaattagaat gtaatcaatc
     4561 taaaattaaa attttagaaa atcttcaagg aaatgatata acctttaata cttctatgct
     4621 ttcacaagat gataggaata aactttataa tatgaatgaa aaatatcaat taatcttatt
     4681 tgcttatttt agtgcacctg catttaaaac aacacaagga ataacgcatt tagtgttaaa
     4741 atgactaaag atttaaacta tacaaaacaa agcca
//
LOCUS       DARATF010000107         4747 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.107, whole genome shotgun sequence.
ACCESSION   DARATF010000107 DARATF010000000
VERSION     DARATF010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4747
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.107"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            7..2595
                     /gene="secA"
                     /locus_tag="SB502_001580"
     CDS             7..2595
                     /gene="secA"
                     /locus_tag="SB502_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEG0434992.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELK
                     AEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMLRLEIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEAQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            2592..3797
                     /locus_tag="SB502_001581"
     CDS             2592..3797
                     /locus_tag="SB502_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0434993.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYLSTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFDILVGSALTDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPN
                     YDGIHVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPVDVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            3820..4605
                     /locus_tag="SB502_001582"
     CDS             3820..4605
                     /locus_tag="SB502_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0434994.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELVRGTPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERKCQK"
     gene            4667..4742
                     /locus_tag="SB502_001583"
     tRNA            4667..4742
                     /locus_tag="SB502_001583"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4700..4702,aa:Lys,seq:ttt)
BASE COUNT         1621 a          585 c          916 g         1625 t
ORIGIN      
        1 ttaaaaatgt ttttaaatac tttaaaagcc gtgtttggca caaaaaatga tcgtgaagtt
       61 aagaaatatt tcaagcgtgt agcacaaatc aatgctttag aaggcaacta tcaaaattta
      121 agcgatgatg aattaaaagc cgaatttgca aaatttaaag agcaaatttt aagcggagaa
      181 aaaaacgaaa atgatgtttt aaatgatgtt tttgctatag tcagagagac aggtaagaga
      241 actttaaata tgcgtcattt tgatgtgcag ttaatcggtg gtatggtttt gcacgatgga
      301 aaaatcgcag aaatgaaaac aggagaaggt aaaactcttg tagcaacctt acctgttgtt
      361 ttaaatgcca tgagtggcaa aggcgtacat gtcgttacag taaatgatta tctagccaaa
      421 agagatgctg agcaaatgag tgcgatttat aattttttag gttttagtgt tggcgtggtg
      481 ctttcttctc aaaatagtga tatagaacac aagcaagctt atgattgtga tattacttat
      541 ggaaccaata atgagtttgg ttttgattat ttgcgtgata atatgaaatt ttcaaaagct
      601 gaaaaagttc aaagagagca taattttgtt atcgtagatg aagtagatag tattttaatt
      661 gatgaggcaa gaactccgct tatcatcagt ggtcctacaa atcgtacttt agatggttat
      721 attaaagcca atgaagtagc taaacaaatg caaaaaggtg aagcagtttt accccctgca
      781 aaacctgagg gtgattttgt agtagatgag aaaaatcgta atattttaat tacagaagca
      841 ggtattgcta aggctgaaaa actttttggc gtagaaaatt tatacagtct tgataatgct
      901 atcttagctc atcagcttga tcaagcctta aaagcacata atctttttga aaaagatgtg
      961 cattatgttt taagaaataa tgaagttatc atcgttgacg aatttacagg gcgtttaagc
     1021 gaaggacgtc gttttagcga aggattgcat caagctttag aagctaaaga aaatgtaaaa
     1081 attcaagaag aaagccaaac tctagcagat attacttttc aaaattattt tagaatgtac
     1141 aataaacttg caggtatgac aggaactgca caaacagaag cgactgaatt ttctcaaatt
     1201 tatagtttag atgttatttc tataccgaca aatattccta ttaaaagaca agataaagat
     1261 gatcttatct ataaaactca aaatgaaaaa ttcaaagctg taattgaaga gattaaaaaa
     1321 gccaatgcta aaggtcagcc tgtacttgta ggaaccgcaa gtatagagcg cagtgaagtt
     1381 tttcacaata tgcttgtaaa agagaaaatc cctcatcatg ttttaaatgc taaaaatcac
     1441 gagcaagaag ctttgattat ccaagatgca ggtaaaaaag gtgctgtaac tatcgctaca
     1501 aatatggcag gtcgtggtgt ggatataaaa atcgatgatg agattagggc tttgggtggg
     1561 ctttatatca tcggtacaga aagacatgaa agccgccgta ttgataatca acttcgtggt
     1621 cgtgcaggaa ggcagggtga tcctggaata agtcgttttt atctaagttt agaagataat
     1681 cttttaagaa tttttggtgg ggatcgtatt aaaagtatta tggatcgctt gggcatagaa
     1741 gagggcgaaa gcatagaatc aagaatcgtt acaagagcgg ttgaaaatgc gcaaaaaaaa
     1801 gttgaaagct tgcattttga aagcagaaag catttgttag aatacgatga tgtagcaaat
     1861 gaacaaagaa aaactattta tcgttatcgt aatgagcttt tagatgaaaa ctatgatatt
     1921 agagctaaaa tttctcaaaa tatcgctgaa tatagcgcaa atgtaatgaa tgattatatg
     1981 cttgacgaaa gcggttctaa tgtaaatttt gaaaatttga aagcaaaaat tttgtatgaa
     2041 tgttcaactc agattagtga aaaagatttt gagaatttaa gcgtcattga aatgcaagac
     2101 aagctaagtc aaattcttga aaattcttat aatgaaaaga tgttaagact tgagattaaa
     2161 gaattgcgta atatagagcg tattttatat ttgcaagttt tggataatgc ttggagagag
     2221 catttgtatc aaatggatat tttaaaaaca ggaataggac ttcgtggata caatcaaaaa
     2281 gatcctcttg tggaatataa gaaagaaagt tataatcttt tcttggagtt ggtcaatcgt
     2341 attaaatttg atagtattaa actacttttt agcgtgcaat ttaatcaaga agaggcgcaa
     2401 aatttagaaa ataaagccaa tgaagaaaat gaaaagctac ttcaaagctc agtagaaatg
     2461 ggcgcaagcg aagataatct tggcgaagct gaatttaaaa aagttccacg caatgctcct
     2521 tgtccttgcg gaagtggaaa aaaatttaaa gaatgccatg gaaaaagtgg tcctaagcaa
     2581 ggaattttag cttgaataaa agcgttttaa aatatttact ttttaagtat ttaagatttg
     2641 ataaagagca accctttatc aatctttcta tgcttttggc ctttttagga gtttgtgtag
     2701 gactttgcgt tttgcttgta gctatggcaa ttatgaatgg ttttgataaa gaatttgaaa
     2761 aacgcttttt tgtgatgaat tatcctatta ctattttgcc taaattctac gctcctgtaa
     2821 atgatgaatt tatagatgag ttaagaaaaa catttccaaa tttgttattt agcccttatt
     2881 taagcactca agttgttgta aagggagata atcgttttga aggtggtgtg ctttttggcg
     2941 ttaattttaa tgatgaaaaa aaaataaacg aagtggttgc taaagcttta aaggatgaga
     3001 atttaagtgg ttttgatata cttgtaggat cagcacttac tgatgaattt ggtttgcata
     3061 aaaatgacaa actttcactt attttttcaa atcttaatcc tagtggattt tctttagtac
     3121 cgcaaactaa acgttttgat gttaaagcgc gttttacttc agggcttgca ttttatgata
     3181 aagcttatat gtacacagat gttgatgcat tgaaaaaagt acttggaata cctaaaaatc
     3241 caaattatga tggaattcat gtatatagcg ataatgcttt taaggatgtt gaaaaaatta
     3301 aatcttattt aaaagatgat tatgctgtgg tgggttggtg ggagcaaaat aaaaattttt
     3361 tttcagcctt agaacttgaa aaaagagcgc tttttatagt gttgatgctt attattttgg
     3421 ttgcaagttt aaatatagta agttctttat tgatgatagt aatgaatcgt cgcagtgaaa
     3481 tagcactttt acttgctcta ggtgcaagca aaaatgaggt aaaaaagagt ttttttgcct
     3541 taggtatgct tattggtggt ggtggtatga tagtgggtgt ggtacttgca ttttttgctt
     3601 tatggctttt gggaaatttt gatattgtaa ctttacctgt tgatgtttat ggaaccagta
     3661 aattaccact tgatttgtct ttaatggatt tttctttaac cattgtgggt gctttaataa
     3721 tcatagcttt atcatctttt tatcctgcaa aaaaagcaac tcaaattaat attttagata
     3781 ctttaagaaa tgaataaatt gtaattttgg agatttttat tgtctttgtt tactcaaaaa
     3841 aataagaatt ttaaaccttt aaaacctcta tcaaagtcaa aaataatcac taatttaatt
     3901 cttttgattt tatttttaat attgttttgt tattgtagtt ttagtataag tgcttatcat
     3961 tttgatttta gcgcaattgc aacctataaa gaaaaatttc ttcaaggttt tttaaatact
     4021 ttaataatca gttttttttc tttattgttg agtataattt tgggtggagt tttttgtgct
     4081 ttttctttaa gttcgattgt ttttttaaga tttttatcta cattttacat agagcttgtc
     4141 agaggaaccc ctttactagt gcaggtatta ttgatatatt atatcattgc aaataattta
     4201 ggacttgata atcgatatgt ggctggagtt attattttat catgtttttc tgctgcttac
     4261 ttagctgaaa tatttagagc tggaatttta agtatttcta tatctcagct tgagagcgct
     4321 agggctttag ggttaaaaga gatgcaggtt tttgcgtatg taatttttcc ccaagcttta
     4381 aaaaatattt tagcaccgct gagtggacaa tttgcaaatt taattaaaga tagttcctta
     4441 ttaagcgtta ttgctgtaaa tgaattaacc caaagtgcgc aagagataaa ttcttatact
     4501 tttgctactc ttgaagctta tgtaattttg gctattacat atcttgtttt gactttacct
     4561 ataagtatat tttctcgtta tttggagaga aaatgccaaa aatgatttaa aaaagcttga
     4621 caaatagagc taattttggc ataatcacat ttttatttca gaaaatgtct cgttagctca
     4681 gccggtagag catctccctt ttaaggaggg ggccgttggt tcgaatccaa cacgggacac
     4741 cattata
//
LOCUS       DARATF010000108         4741 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.108, whole genome shotgun sequence.
ACCESSION   DARATF010000108 DARATF010000000
VERSION     DARATF010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4741
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.108"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            23..304
                     /locus_tag="SB502_001584"
                     /pseudo
     CDS             23..304
                     /locus_tag="SB502_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782082.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            311..610
                     /locus_tag="SB502_001585"
     CDS             311..610
                     /locus_tag="SB502_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0434995.1"
                     /translation="MALGLILCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFI
                     TLANWYPKKERGIYTAVWNISHNIGGGIVAPIVSLSGFALAAFLGVSLADFNETH"
     gene            647..829
                     /locus_tag="SB502_001586"
                     /pseudo
     CDS             647..829
                     /locus_tag="SB502_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778094.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1534..2286
                     /gene="peb3"
                     /locus_tag="SB502_001587"
     CDS             1534..2286
                     /gene="peb3"
                     /locus_tag="SB502_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HEG0434996.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVV
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            2383..3477
                     /locus_tag="SB502_001588"
     CDS             2383..3477
                     /locus_tag="SB502_001588"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEG0434997.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELVNLTLSQTMDAVLCIDSPAFNI
                     PFAKALKKAGNKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYI
                     GHPLLDEIKEFKNQEDINHTFSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGE
                     KILCVPSFNLEKLEVYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILNEI"
     gene            3489..3974
                     /gene="greA"
                     /locus_tag="SB502_001589"
     CDS             3489..3974
                     /gene="greA"
                     /locus_tag="SB502_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEG0434998.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIARAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            4107..>4741
                     /locus_tag="SB502_001590"
     CDS             4107..>4741
                     /locus_tag="SB502_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEG0434999.1"
                     /translation="MGDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDF
                     NLSCFFKKVKIFNLQKQPIKLNLHTSKGNNLVLNSAFIKLAHGDIFLPPLLQFTLKTL
                     RNHYLLVFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWV
                     CEGHYHQNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
BASE COUNT         1643 a          652 c          848 g         1598 t
ORIGIN      
        1 agttagtaag gatggtttaa atatgtttga ttttttcaaa cctaaggcaa aagctattaa
       61 atttcctctt taggaaattt tacctagata ttacaaaatg agaacttgga gtttaagtgg
      121 ggtttttata ggatatatgg gatattatct tgtgcgaaat aatatcactc tttcaactcc
      181 atttatacaa aatcaactta atctcagtaa atcagacatc ggaacaatca caggctcaat
      241 gcttatagct tacgggatta gcaagggtgc aatgagcgtt ataagcgaca aagctggtcc
      301 taaaaaatac atggctttag gtcttatttt atgtgctctt gtaaatgttt tacttggttt
      361 ttcaaattct ttttacgctt atgtaggttt tgttatcgcg cttggggttt ttcaaggtat
      421 gggggtaggt ccttctttta tcactcttgc aaactggtat cctaaaaaag agaggggaat
      481 ttacacggcc gtttggaata tctcacataa tataggaggc gggatagttg ctcctatagt
      541 gtcgctttct ggatttgctt tagcagcatt tttaggcgta agcttagcag attttaatga
      601 aacacattag catatcaatc atttttatgt tcctgctttt tgtgctgtgc ttattagcct
      661 ttatatgctt tatgcagtca aaggaagtcc taaaaatgaa ggtttggttg atattagcga
      721 aatcaacgaa atgagaggta ttaaaaccga agaaattaaa gctgtagaaa gtccaaattt
      781 aagcggtctt gaaatttttt atcattatgt ccttaaaaat aaaaatgctt ggtatgtagc
      841 ttggatggat acttttgttt atatggtgcg ttttgggctt atttcttggc ttcctattta
      901 cttgctagaa acaaaaggct ttaataaaga acaaataggt attgcctttt ggctttttga
      961 atgggctgct ataccttcta ctttacttgc aggatatatt tcagataaaa tttttaaagg
     1021 ctatagaatg cctcctgcta taggcgccat ggtgattatt ttctttatga ttattggata
     1081 ttttacttca aataatcttt atatggttat tttctttgca gctatggcgg ggtgtttagt
     1141 ctatatacca caatttttag caagtgtgca aactatggaa gtcgttcctg cttttgcagt
     1201 aggatcttgt gtaggatttc gtggctttat gagttatgta gtcggcgctt cacttggaac
     1261 aaaagctata ggttgggctg tggattacta tggtagttgg aatgctggtc ttatcatgct
     1321 ccttagtgct tgtattcttt gtatactttg ttctacttta tgtcatttta gcgctaaaaa
     1381 gaagcatcaa taacaatttt aacttttgct tgcaaaaata ccaagcaaaa gttagattta
     1441 ataatatttt tgttacatta taactattta ttaacataca atttctaaaa tcttaccttc
     1501 aatcaataaa aatttatcat aaaaggaaat actatgaaaa aaattattac tttatttggt
     1561 gcatgtgcct tagcttttag tatggcaaat gcagatgtaa acctttacgg accaggtggc
     1621 ccacacacgg ccttaaaaga tatagcaaac aaatatagcg aaaaaacagg cgttaaagta
     1681 aatgtaaatt ttggccctca agcgacttgg tttgaaaagg ctaaaaaaga tgcagatatt
     1741 ttatttggcg cttcagatca atcggcttta gctatagcga gtgattttgg aaaagatttt
     1801 aatgtgagta aaatcaagcc tttatatttt agagaagcca tcatacttac tcaaaaaggc
     1861 aatcctttaa aaatcaaagg tttaaaagat ttggctaata aaaaagtaag aatcgttgtg
     1921 cctgaaggtg ctggaaagag caatacttct ggaactggag tttgggaaga tatgataggt
     1981 agaactcaag atataaaaac catacaaaat tttagaaaca atatcgtggc ctttgttcca
     2041 aatagtggaa gtgcaagaaa gcttttcgca caagatcaag ccgatgcttg gatcacttgg
     2101 attgactggt caaaaagcaa tcctgacata ggaactgccg tagctataga aaaagatttg
     2161 gttgtttata gaacttttaa tgtggtagct aaagaaggtg cgagcaaaga aacacaagat
     2221 tttattgctt atttaagttc taaggaagct aaagaaattt ttaaaaaata cggctggaga
     2281 gaataaacct tcatacacgc tttttagcgt gtattcttgc ataacttctt ttaattaagc
     2341 caaaataaga taaaatgttt aaaatattga taaggaaatt ttttgaaaac ctttttagtt
     2401 tgtgctttag agccttcagc aaatttgcat ttaaaagaag ttttaaaagc ttataaaaaa
     2461 gattttggtg aatttgaact tcatgggatt tatgatgaga gtttatgcaa agaatttgat
     2521 ttaaattcta aaccacttta tagctcacat gaatttagtg ctatgggttt tatagaagtt
     2581 ttacctttga ttttcaaagc aaaaaaagcg atcaaagaat tagtgaatct aactttaagc
     2641 caaacaatgg acgcagtttt atgtatcgat tctcccgctt ttaatatccc ttttgccaag
     2701 gctttaaaaa aagcaggcaa taaaattcca cgcatttatt atatcttgcc tcaagtttgg
     2761 gcgtggaaaa aaggtcgcat acctatcata gaaagtcatt ttgatatttt agcttctatt
     2821 ttgccctttg ataatcaatt ttttaacaaa agcacctata taggccatcc gcttttagat
     2881 gagataaaag aatttaaaaa tcaagaagac attaatcata cattttcaaa aaaagatgat
     2941 gaaaaaacta tagccttttt accaggttca aggcgtagtg aaattaggcg tttaatgcct
     3001 atttttaaag aactttctca aaaatttaag ggtgaaaaaa ttctttgcgt tccctcattt
     3061 aatcttgaaa aattagaagt ttatggtgat attagcgaat ttaagataga aagtaacact
     3121 ccaaaagtgc ttaaaaaagc tgattttgcc tttatttgta gtggaacagc tactttagaa
     3181 gcagctttag tgggaactcc ttttgttctt gcttacaagg caaaggctat cgatattttt
     3241 atcgcaaaac tttttgtaaa attaaaacat ataggacttg caaatatttt ttgtgatttc
     3301 gctggaaaag aagctttaaa tcctgaattt ttacaagata aagtcaatgt tttaaattta
     3361 tatgaagctt acaataaata tgattataag gcattttttg ctaaagttga ttttttaaaa
     3421 gaatatttac aatttggaag tgctaaaaat ttagcaaaaa tcctaaacga aatataaaag
     3481 ggtaaatcat gcaaaaagaa ccaatgagtc aatttggcta tgataagtta gccgcagaat
     3541 taaaagattt aaaagacaat caacgccctg ccgttgtaat agaaatcgat acagcaagaa
     3601 gtcatgggga tttgaaagaa aatgctgaat accatgctgc aagagaaaag caagctttga
     3661 tagaaagtcg tattgcagag cttagtgact tgctagcaag agctcaagta atcgatcctt
     3721 cgagctatga acacgatagt gtgaaatttg gttcaagtgt tgtgatcatg gatttggata
     3781 cagaaaaaga aagcaaatat actctagtag gaatttgcga aggaaattta gataagggtt
     3841 atatttccat cgcatctcca atagcaagag ctatgcttgg gaaaaaagaa ggggatgatt
     3901 ttaaagtgcg tttgccaaaa ggtgagagtg aatttgaaat cctttctata aattatgagc
     3961 ctttaaaatt ttaaggataa aaaattttac tacaaaatgg agcgatttta atcgcggatg
     4021 ctcatgaaaa tgaacaaaga aagggatttt gggaattttt acaagcctta aaaaaaggta
     4081 aaatttccac ccctcaactc atacttatgg gtgatatttt cgatttactt ataggcgaaa
     4141 tctctgctac acatgaattt gctaaacctt acatagaact tttagaagaa ttagccttaa
     4201 agattgaaat tatatactta gaaggcaatc atgattttaa tctttcttgt ttttttaaaa
     4261 aggtaaaaat ttttaactta caaaagcagc ccataaagct taatttgcat acaagtaaag
     4321 gtaataatct tgttttaaat agtgctttta taaaattagc tcacggagat atttttttac
     4381 cacctctttt gcaatttact cttaaaacat taagaaatca ttatttgctt gtatttttga
     4441 attttttaaa tattattact cgtaatttta tttcaaataa aattcttcaa aatcaaaaca
     4501 aaaaaaacct tttttatcaa ataaaagatt ttgaaaattt agcgaaaaaa agatatgaaa
     4561 aatatgaaaa tttaggattt tgggtatgtg aaggacacta tcatcaaaat catcaaatca
     4621 acaaagaaaa cattaaatat cttaacttag ctagttttgc atatgagaga agtttttttg
     4681 tagtagaata tcaacaagaa atcaaatttc gagaacagaa attgaggggt caaaatgttt
     4741 g
//
LOCUS       DARATF010000109         4678 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.109, whole genome shotgun sequence.
ACCESSION   DARATF010000109 DARATF010000000
VERSION     DARATF010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.109"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..689)
                     /locus_tag="SB502_001591"
     CDS             complement(<1..689)
                     /locus_tag="SB502_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0435000.1"
                     /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKLNILNFE
                     DDVFTNIERILLDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFSNQFTRFFFYFLKPNE
                     KLILQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYY
                     RDENLCFVGEV"
     gene            725..1999
                     /locus_tag="SB502_001592"
     CDS             725..1999
                     /locus_tag="SB502_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEG0435001.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEISKILPTY
                     ANTHSDSSLNSFKTQQIYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQYYLCNEES
                     LEEGGTPGILQLIRASLAFKIKDSIGVKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLDLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIVKLSH"
     gene            complement(1996..2820)
                     /gene="purU"
                     /locus_tag="SB502_001593"
     CDS             complement(1996..2820)
                     /gene="purU"
                     /locus_tag="SB502_001593"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEG0435002.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVSPVNHEFTWQDMQQAGRNIEKDVLSKALDLVFEDRIFIHNNKTIIF"
     gene            complement(2817..3935)
                     /locus_tag="SB502_001594"
     CDS             complement(2817..3935)
                     /locus_tag="SB502_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEG0435003.1"
                     /translation="MQISKISLKNNPDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKPKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGAGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELYKFFKSPRLDVGYRYLQ
                     ELDLEKQIFGFESIFKSLEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     QKEYLKYANQAFYLDDISDFELAKIAFEMPLKKWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLAK"
     gene            complement(3904..4395)
                     /locus_tag="SB502_001595"
     CDS             complement(3904..4395)
                     /locus_tag="SB502_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HEG0435004.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQSEILNP
                     SVMTEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(4392..4640)
                     /locus_tag="SB502_001596"
     CDS             complement(4392..4640)
                     /locus_tag="SB502_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEG0435005.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPDNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
BASE COUNT         1609 a          785 c          567 g         1717 t
ORIGIN      
        1 ttaacttctc cgacaaaaca caaattttca tctcgataat aaagatcaag ttctaaattc
       61 ttatcccagt aactttgcac tccattgata ttgaattttt tctcaagcaa ttctctagaa
      121 agctgttcaa aacaaaaact ttgataaagt tcaaattttt ctttaatgca ttctaaaact
      181 tctttataac gattttgcaa aataagcttt tcattgggct ttaaaaaata aaaaaagaaa
      241 cgagtaaatt ggttgctaaa tataatctta tcttggacaa cataagatct tagttctttt
      301 ttgatttttt gtcttttatc ttttattttt ttagcttcct tactatactc aagttttatt
      361 atacctgttt ctaaaagata tttaagtgta gataaagctt taaaatgctg aatttttcta
      421 ttgatagaaa aacgcttgcg attgttttta gctagtaaag taagagcgta agaacttgtt
      481 tcatccaagg cgaaataact tttaattttt agataatcat caagcaaaat tcgctctata
      541 tttgtaaaca catcgtcttc aaaatttaaa atgtttaatt tttcaaaacc ttcaaacaca
      601 ctataaaaat caaaaagctt acttaaagac aaattcttat gcaaatctac aaagttctta
      661 aattttatat ttttcctttt ataaagcatt tttatagtat aattttagca aatttttata
      721 aggattgtat ttgcaaattt cagatttaaa aaaagaattg atcttaaaaa aaggtatttt
      781 gcattttgac ttcacagcaa gtgctttagc tctaaaatgt gtagaaaaag aaatttcaaa
      841 aattctccca acctatgcaa acacacattc tgatagctct ttaaattctt ttaaaactca
      901 acaaatttac gaacaagcaa gaaaagatat aaaaaaaagt ttatcattag atgaaaattt
      961 tgcccttata gcctgcggaa caggatcaag cagtgctatt aaaaaatttc aagaattgat
     1021 cggcatttac attccccctc ttgtaaaaga aagatatttt acgcaaattg ataaaaatac
     1081 cttaccttta gttatcgtag ggccttatga gcatcattct aatgaacttt catttcgaga
     1141 aggcttgtgc gaatgtatta gaattccctt ggataaaaat ggggaaattg attttgattt
     1201 tctagaaaaa actttacaaa aaaacaaaaa aagaaaaata atcgctagct tttctttagc
     1261 ttcaaatgtt actgggatat taagtgatta caaacgcatt tctgaaatgg ttcgtaaatt
     1321 taaagggata gttgcttttg atgcatctag tttcattccc tataaaaaca tatcttgtca
     1381 atactatgat gcgttgttta taagttctca taaattaatc ggtggtattg gcggttctgg
     1441 acttttagct atcaaaaaag atctttgtgg aaacaagcct agctttgcag caggtggaac
     1501 tgtgggctat gtttctcgca cttcacaata ctacctttgt aatgaagaat ctttagagga
     1561 aggaggaaca cctggaattt tacaactcat tcgcgctagc ttagctttta aaatcaaaga
     1621 ttctataggg gttaaaaata tagaaaaaaa agaagaaatt ttaaaagatt atttttttga
     1681 aaaactaaaa actataccta atttaatttt atacgcaaag aatttaaaaa cccgattgcc
     1741 tatttttgct ttcaatatca aaggaatttc tccttttgat atcgcttacg aacttagtaa
     1801 aaaataccac atagaaacac gcgctggatg tgcttgtgct gggccttatg gtcatgattt
     1861 gctagactta aaagataatc aaaaacttaa aacaaaacca ggctggttaa gaataagctt
     1921 gcattatacg catgaaaaag aagatattga ttattttttt aatgctttaa ataaaactat
     1981 agtaaaatta tcgcattaaa atattatagt tttattatta tgtataaaaa ttctatcttc
     2041 aaaaaccaaa tcaagtgctt ttgaaagaac atctttttct atatttctac ctgcttgttg
     2101 catatcttgc caagtaaatt catggtttac aggcgaaaca gcttgagtga taataggacc
     2161 ttcatcaaga ttattattta caaaatgtgc cgtagctcca attattttaa cccctctttc
     2221 aaaggcttgt ttataaggat ttgctcctat aaatgcaggt aaaaaagaat ggtgaatatt
     2281 tataatcttg ccttcaaaat gcctaacaaa atcaggagat aaaattcgca tatattttgc
     2341 taaaaccaaa taatcaaatt tatattgttc aagacatttt aaaatctgat tttcttgctc
     2401 tttacgatct aaattttcag cgctgataaa atgataagga atttcaaatt tctcaactaa
     2461 atcctttaaa gagttgtgat ttgaaatcac agctttgata tttgcttcaa gttcgttact
     2521 ataatgcttt attagcaaat ctcccaaaca atgactttct ttagtagcaa aaacaacgat
     2581 atcttttttt ctcttctcgc aaagctctat caaggcttct tgtccaagca tagcctcaag
     2641 cgttcctata aaagcttctt tatcaaactc accttctaaa agagcacgaa aaaaaaacat
     2701 tccttcgcct acaaattcat cgttttttac tatattgata tgatatttaa aaataacatc
     2761 agaaattcta tagattaaac ctttttgatc tttggtgcaa atttttaata cagaaatcat
     2821 ttagctaaac cttttatata ttcttttaat tcattctctc ttgcttcttg aagctttaag
     2881 ccaagaattt taccacaaaa tccagcattt atgaaatctt ttgctaaaat tttactttca
     2941 aacttattct cataaagccc taatctttta gcttgctcaa tacgcttttt actccaaagt
     3001 ccaagccatt tcttcaaagg catttcaaaa gcaatttttg ctagctcaaa atcacttata
     3061 tcatcaagat aaaaagcttg atttgcgtat tttaggtatt ctttttgaag tttggttctt
     3121 ttaaaaaata tatctttttc taaattaaaa aaattcaaat acaaatacaa gaataaagca
     3181 tcgcttttta caaattctct actttgtctg agcaaatttt gaaattccaa actcttaaaa
     3241 atactctcaa agccgaaaat ctgtttttct aagtcaagtt cttgcaaata tctatagcca
     3301 acatcaagtc tagggctttt aaagaattta taaagctccg cattgatcct atctttgcta
     3361 agatcagtta tatccatact ttgcatcaat ttcaagcttt cgctagttat cttaaagtta
     3421 aaccttgaag caaatactac cgctcttaat actcttaaac tatcctcttg aaagctttgt
     3481 ttatcaatat gccttaaaaa gcctgctcct agatctttta atcctccata aaaatctaaa
     3541 aactcatcgt taaaaagatt aatcatcata gaatttatgg taaaatcgcg tcttttggcg
     3601 ccaagttttt catcattaca aatttgaact tcaaaacctt tatgtccata gcttatttta
     3661 ttttcggttc tagcaagagc taaatcataa tttttaaact tatacacaaa aaaacttttt
     3721 ccaaagcctt gtgcgcccaa tttttgcata atcttttcaa aatctttagg ttttatatca
     3781 taaagctcta tatcatagtc acaaattttt aagcctaaaa acaaatccct aacgctacct
     3841 ccaaccaaat acgctcgttt ggtataaggc tttaaaaact cagcaataaa ctgtaaatcg
     3901 ggattatttt ttaagcttat cttcgatatt tgcaagtaaa aactctaaaa aatttatggt
     3961 caagtttaac ctattttcaa gatcatcttt ttttatgcta tttaaacctt caaaaagaac
     4021 taaaattctc tctctaagat gttttaaaaa aatatcctca ttaagcgttt gaacctctgt
     4081 cataacacta ggatttaaaa tttcactttg taaaaaaggc tcttcttttt taaactcttt
     4141 attttcctga gtagaaattt caatattatt ttgtattttt tgctcttctt caaattttgc
     4201 catagaaatt ttatcttcta agtcttgcgg agtatcaagc tcttcgcata caaactccat
     4261 aggtggtaat tcatctttta tttcagtttt tctatttaat tcttgttctt ttaaaatttc
     4321 attttgtctt ctttgctctt ccatgataga gctaacttcg ctaatggttt ttttagctaa
     4381 atcttccaaa ttcatatttt tatcaaccac cttttaaatt cattaatttc ttcatcgctt
     4441 ttcatattaa taaaaaaatc caacatttga gtgtttaagt ctttatgctt ggatctaaaa
     4501 ccactaagac gacgaaccgc atcgatagcg ttttgattat ccggatcttc ttttaagata
     4561 tttttataaa tttctaaagc ttcgtctttt aacccttgag cctcatagat agaagcttca
     4621 gtgactgtat ttttcatcac tgtttcctaa aatttttctt taattctagc aaaaagct
//
LOCUS       DARATF010000110         4603 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.110, whole genome shotgun sequence.
ACCESSION   DARATF010000110 DARATF010000000
VERSION     DARATF010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4603
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.110"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            83..158
                     /locus_tag="SB502_001597"
     tRNA            83..158
                     /locus_tag="SB502_001597"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:116..118,aa:Phe,seq:gaa)
     gene            complement(267..343)
                     /locus_tag="SB502_001598"
     tRNA            complement(267..343)
                     /locus_tag="SB502_001598"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(307..309),aa:Ile,seq:cat)
     gene            complement(397..1497)
                     /locus_tag="SB502_001599"
     CDS             complement(397..1497)
                     /locus_tag="SB502_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEG0435006.1"
                     /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGVHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            1575..2543
                     /locus_tag="SB502_001600"
     CDS             1575..2543
                     /locus_tag="SB502_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0435007.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKFCDEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINVVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRHILGDGLYGYNGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFEQINLGENDEKISLEFLLEFFNSFA"
     gene            2488..3723
                     /locus_tag="SB502_001601"
     CDS             2488..3723
                     /locus_tag="SB502_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEG0435008.1"
                     /translation="MMKRFRLSFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKNLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDSKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     EPSQVVSSTSKALPPQVEHLSASTDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSTSEGINLEWSDNDARAVEYEIRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAGLRSEPSSKVKAAQ"
     gene            3723..>4603
                     /gene="trmB"
                     /locus_tag="SB502_001602"
     CDS             3723..>4603
                     /gene="trmB"
                     /locus_tag="SB502_001602"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEG0435009.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLTKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLTQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYEL"
BASE COUNT         1751 a          598 c          789 g         1465 t
ORIGIN      
        1 tttttgtatt taaacttaaa ttaaagaaaa aaagatacaa ttacattttt actttatcaa
       61 actttacttt atcaaacatt gtggttggat agctcagtcg gtagagcagc agactgaaaa
      121 tctgcgtgtc ggcagttcga ttctgcctct aaccaccact ttatctttca aaaaatcaca
      181 tcacatactt tttttatata agattgaaat atttaaagaa ctaaaagtta ttttttaaag
      241 aaagagtcta tagcttatat gtagaatggt ggatttagca ggactcgaac ctgcgaccaa
      301 ccggttatga gccggttgct ctaaccaact gagctataaa tccgcctaag ttgaattaaa
      361 agataaaatt atatcttatt aatgcttaaa aatattttat ttagccttta tatccgtcca
      421 aaaatatcta aaagtgatta aatgctgtaa aattccaaaa aaaatcataa aaatagtaaa
      481 agaacttcca ccataactaa aaaaaggcaa agggatccca actactggtg caaaacctat
      541 agtcattgaa atatttactg ccgcataaat aaaaataaat aatgcaacac aattaatagc
      601 aactctagca aaataatcat ctttaagttt ataatttaaa ctaagtagat gaaaaataag
      661 taaaatataa aatataatta atgtcaatcc cccaataaat ccaaatcttt ctatcatgta
      721 agcgaaaata aaatcactag ttgaaatagg taaaaattta aaatgagttt gcgtagcttc
      781 atcttgagat tttccggtta aaccaccatt tccaatagct atcattgatt gggctacttg
      841 ataacttggt ttttctgaaa taaaatcatg aattctttgc ttttggtagg gttttaaaag
      901 atgtgtataa ataataggag agctaacact tatagctata acaatactta accaaatttt
      961 ataatgaact cccatgataa aaagcactcc aaaaccaaca agtagtaaaa ccatagcact
     1021 tcctaaatca ggttcttttg caattagcaa aaaaggcaag atgatgtaaa agctaagttt
     1081 gatgaattgt ttaagtttgt atccattttt tggaggagga ttttgataaa taagataggc
     1141 aagcattaaa ataaaactag gtttaaaaat ttcagaaggt tgtatagtaa agtgagtaaa
     1201 aggaatttca agccatcttt tagcacctaa tttttcaacc ccaaaaatat ctacgcttag
     1261 caataaaaaa atattaatcc aataagcaac aggaataatc caaataaatt tccttatggg
     1321 aaagaagaaa aaaaccataa aagcaaacaa tcccacacag gcataaacaa actgtttttc
     1381 tgctaaaaaa ggattagctt caaagattaa gaaaaatgaa ataagaatta tgggtaaaaa
     1441 taaaatgggt tgcatatagt caaaatgagt taaaattctt ctatctaatc taaacaaaat
     1501 ttgccttcag ttggtaatat aaagctataa ttataaacta aaattttaaa tttatcaaaa
     1561 cctctaagga aaaaatgcaa acttttttag tagatgaaaa ttcaaggctt gatgtatttt
     1621 tggctaaaaa attaaaccaa agtcgcaatc aagttgcttt acttatagaa aaagattgtg
     1681 tacaggttaa tgataaaatt caagataaaa attcatttaa gcttaaaaat ggtgatatta
     1741 tttctattgc aagtttaaag ttttgcgatg agataaaacc tcagtttgaa gtggattttg
     1801 atattgatgt gttatacgaa gatgaagact tgcttgtttt aaataaacct tcaaatttag
     1861 tcgttcatgg agcaagtagc gttaaaaatg ccactttggt ggattggtta atagaaaaaa
     1921 aatatacttt atcaaattta ggaggagaga taagagctgg tcttgttcat agattagata
     1981 aagatacaag cggagctata ctaatagcga aaaataactt cactcatcaa aaattaagcg
     2041 aacagcttgc agataaaagc atgggaagaa tttatcttgc gttaattgat ttgccactaa
     2101 aagaagataa aattatagta gaaaaatttt taatgcgttc gccttctaat gctattaaaa
     2161 aaatagccat agataaggaa aataaattca gtaaaaacgc aaaatcagct tttataaatg
     2221 tagtaaaaac tgaaaactta actttgatgg ctgctaagct tttcacagga agaactcatc
     2281 aaattagagc gcatttagct agtttaaatc gccatatttt gggtgatggt ttgtatggtt
     2341 ataacggtaa gtatgattgc aggataatgc tacatgctta ttttttgtat tttatccatc
     2401 caaaaaccaa agagcaaatt tttgttaaag cacctttgat ggaagatttt aaaaatatta
     2461 tgtttgaaca aattaattta ggagagaatg atgaaaagat ttcgcttgag tttttacttg
     2521 agttttttaa ctcttttgct tagtgcttgt agtgtttcgc aaatgaattc gctagcttca
     2581 agcaaagagc ctgctgtaaa tgagagcttg ccaaaggttg aaagtttaaa aaatcttagt
     2641 gatatgagta acattgcttt tgaatgggaa cctttatata atgaaaatat caaaggattt
     2701 tatctgtatc gttctagcga tgaaaatcct gattttaaac ttgtaggtac tattaaagat
     2761 aagtttcaaa ctcattatgt agatactaaa ttagagcctg gtactaagta tcgttatatg
     2821 atgaaaagct ttaatgaaca aggacaaatt tcagaagata gcaaggttat agaagtgagc
     2881 acagctccaa gacttgaagc tgttcctttt gttcaagctg tgactaattt gcctaatcgt
     2941 attaaactta tttggcgtcc gcatcctgat tttagggttg attcttatat tattgaaaga
     3001 accaaaggtg atgataaaga atttaaaaaa attgcagaag taaaaaatcg tttaaacgct
     3061 gaatacatcg atagtgattt aaaacctaat gaaaattcaa gttatagaat tattgctgtg
     3121 agttttaatg ggataaagag tgagccaagt caagttgtaa gttctacaag caaggcttta
     3181 cctcctcaag ttgagcattt aagtgctagt acagatggtt ctaataaaat cattttaact
     3241 tgggatgctc ctacgtatga agatttttct tattataaag tttattctac gagctcaagt
     3301 ttccttcctt ttagtgtttt ggcaaagact gataaaaatt cttatgagga tatagtagaa
     3361 ggagcaggta aaagcaagta ttataaagta acaatggtcg ataaagatgg tcttgaaagt
     3421 cctatgccaa aagatggtgt agaaggtaaa actttgggta accctttggc tcctagtatt
     3481 attttggccc aaagcacaag tgaagggata aatttagaat ggagtgataa tgatgctaga
     3541 gctgttgagt atgaaataag acgctatggt ggggagcaaa atgcagtttt taaaggcatt
     3601 aaagaaaagc gattaaaaga tgtaaaagct ttaccagggg tggaatatag ttatgaagtt
     3661 attgctattg attcagctgg acttcgttca gaaccttcaa gcaaagttaa ggcggctcag
     3721 tagtgccaaa ttttaaaagt aaaaagatca aagaaataaa tctgccttat agtaaggatg
     3781 atgttgaatt tctttggctt actaagaatg ataatgttag tcttatttat acaaaggttc
     3841 aagaagagag tttttttctg cagattaaaa aagcacaaaa tggttttgtg attaaaggcg
     3901 ataaacatac aaaaccttct aaaataggtt atttgcaaaa ggctttaaaa atctttaaag
     3961 aaggtttttg tgaggatatt atcaatgaag cttttggact taaaaataat gctttaattg
     4021 aaaaaacacc atttatcgtt gataattttg atgagctttt atctagactt caaggtaaaa
     4081 tttatataga aataggcttt ggatcaggaa gacatttgct ttatcaagca aaagaaaatc
     4141 caaatgtttt aattttaggg gtggaaattt acaacccagc tttaactcaa gtggctaaac
     4201 ttgctaaagc acaaaatgta aataatattt tgctaatcca aagtgatgcg agattgttat
     4261 tgagtgtatt aaaatcaaaa tcagttgaaa agattttttt acatttccct gttccttggg
     4321 acaaaaagcc tcataggcga gttattggga aagatttttg caaagaatgt gctagggttt
     4381 taacccaaaa tggtcgtttt gagcttagaa cagatagttt tgagtatttt aattttactc
     4441 tagaacaatt tttaactttt cctgctccaa aatttagtct tagaaaaaat gaaaatttag
     4501 aaatttcaag caaatatgaa gatagatgga aaaagcaaga aaaaaatata tatgatcttt
     4561 gggtgtggaa ttttaaccaa gagtgtaaaa actatgagtt aaa
//
LOCUS       DARATF010000111         4586 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.111, whole genome shotgun sequence.
ACCESSION   DARATF010000111 DARATF010000000
VERSION     DARATF010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.111"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            24..481
                     /locus_tag="SB502_001603"
                     /pseudo
     CDS             24..481
                     /locus_tag="SB502_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002898691.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
     gene            1333..2283
                     /locus_tag="SB502_001604"
                     /pseudo
     CDS             1333..2283
                     /locus_tag="SB502_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799189.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(2426..4510)
                     /locus_tag="SB502_001605"
     CDS             complement(2426..4510)
                     /locus_tag="SB502_001605"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEG0435010.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYKLKNNGEYEKIPSSEKIIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
BASE COUNT         1576 a          667 c          765 g         1578 t
ORIGIN      
        1 taaatttatt gaaggagaaa cttatgaaga aaaatgcttc gagcaagata ttgctaagct
       61 taggtgtagc aactttgctt tattcgagtg cttttgctga agaaatcaat cttacagggt
      121 cttcagatgt gggaaattat tttgaagaaa atggtaagga tatcaatctt aaaaatcctg
      181 atgattacaa aggaaaagat ttaagtatca aaatgggtgt ttgggattta ccaaacgatg
      241 attatgatag cgctgattat cgatttaact tgatatcggt aaagacaata ctttaagctt
      301 tacacataac aataaagaaa atcctgctta tgtaacaaat ctaaacgcta ctgctaaaga
      361 ggttaaaaca acagatatag ttttacaagc ttttgcatct tcggtgatta atggaaattt
      421 aactatgact agctcaggag gtgaagctat taccgaggat gaaaaaaaag ttcaggtata
      481 attctttata atggagcagt tgaaggaaaa agtgctaatg gtagcttaac tataaatgga
      541 aattttactg ccgataaaac gctttttgct acttatggaa attttgttaa ggtaaatgga
      601 actgcaaatc ttaaaaattc aaattttgga cttatgaagc gctcttatac agacttagaa
      661 gcaaataatg tagtaatagt tcaagctaaa gatttcaatg aagatatttt aaaagcaaat
      721 aataacgcag gtgcattact tttaaaattc gcaagtgatt atatctcaac cagtgttcaa
      781 ggcaaagatc ctttggaagc aggaactgta ctggatatca ctgatgacaa atatagcgga
      841 ggtttagtag attataaact tagcgttcaa aactgcggtg gcaataaatg cttagtaatc
      901 aatggaggtg ctactgcagc agctaaaaat aagctagttc aacttcaagt agatatagat
      961 actatcgata aattgcttaa aaatgaattt gattctagtc aagatgaaga atggaaacaa
     1021 gcaaaagaag ctcttgaaaa acaaaaaact gaacttcaaa caatgttaga agaagctgag
     1081 aaaaatggcg gtaaaatcga tgatgaaaaa tacattgatt tagtaaataa aaattcaaat
     1141 ttaaatctta gtactaatga taaagcttct atcctagcac ttcgttctat cacagaacaa
     1201 ttaggaagta taggagcaga tttagcaagt agagaaggtg taaaactagc tttagatatc
     1261 aaaaaagaca cagacaatac aggtaaatct gtatctaatc tcaattcagc ttctagtgca
     1321 gtaaatacca ctatgaatat ttctaatgat gtttctatag gttctcgtgt agcaatgcta
     1381 aacaatcctt ttggaactta tgcttctaaa atgaatggtc ttaaatttgc tgctttagat
     1441 agtgatatga gaccaagcta tgtaaatgaa tataccaata gtgtttgggc taatgctttt
     1501 ggtggtgcta acattatcga tggggatagt ggtgcaatgc atggtgctac tataggtgta
     1561 gataaacaag ctaatgatga tgttttatgg ggtgcttatt ttacttatgc aaatgctaaa
     1621 atcaaagaca ataatttaga acaaaaaagc gataacttcc aattaggtat gtattctact
     1681 atcaatatag ctccacaatg ggaacttaat cttaaagctt atgctcaagt ttctccaact
     1741 aaacaagaca atgtttaaat agatggtgca tataactcag attatacaag taaattctta
     1801 ggacttagtg ctaatgcagg tcgtgtgttt gactttagtg ataatacttt atttattaaa
     1861 ccttttgcgg gagtaaatta ttatttcagt tatactccat ctcatacaga aaatggtgct
     1921 attgctaaag atattgattc tatgaaaaac aattctgtaa gtattgaagt gggtgctgaa
     1981 tttagaaaat atatgaatga aaactcttat atttttgtaa ctccaaaaat agaacaattt
     2041 gttatcaata gtggtgatga ttacacagct aacctagctg taaataatgc tttctttact
     2101 agtgtagaag ctaacaacaa gaaaaaaaca tacggacaaa ttatcgtagg gggtaatgta
     2161 gattttacaa atcaactcag tatgaatctt ggctttggtg ctaaacaaat actagcaggt
     2221 aaagtagata ataaaaatga aacttactta agtggtcaag taggacttaa gtataaaatt
     2281 taatcttaaa aatcatttct aaatcttttt atagtttaga aataattgtt tatttctatg
     2341 ggaaatctcc tagggcttta tcttaaagcc cttttttata acaaacaagt aaataagtct
     2401 ttagagtaaa aaaccctaaa aacttttagt tttctttgaa aagtttggaa gctaagtgcg
     2461 ttgcacgact ttgatctgta tcttttttaa gtgttttata aattttactt acatattctt
     2521 ctaaggtttg ttgagaatct atgatttttt cagaagaagg aattttttca tattctccat
     2581 tatttttaag cttataagct aaaacattat cactaagttg caagcgtaaa aattgagcta
     2641 atttagcttt gcttctttca tcatatatag gagtcataag ttctaaacgg cgttctaaat
     2701 ttcttggcat ccaatctgca ctcgatataa aataatttgg ctcactatgt ttaaaataaa
     2761 atactctagc atgttctaag tattttccta tgatgcttct aacgcgtatg tttttgctgt
     2821 attcttcatc aggttttaag caacaaattc cgcgtatgat aagatcgatt tgcactcctt
     2881 ccatacttgc ttcataaagc gcttgtatga tatcactatc cacaagagaa ttcattttag
     2941 ctacaatgac accttcattt ttcttgcttg tttcaatgcg tatcatttct aaaacttttt
     3001 ctttgatttg atttgggctc attgaaagag tttgaaggcg acgattttta ctaaagcccg
     3061 ataagatgtg aaaaaagctt gtcgtatctc ttgcaaattc tgctttgctt gtaaaataac
     3121 tcacatcagt atagatttta gcactgcttg cattataatt tcccgtactt aaatgcatat
     3181 aaaatttaag tttatctcct tgtttgcgta tgacttgaga aaccttagcg tggactttaa
     3241 aacctgtaat gccataaata acatgagctc cggcattttc taaagctttc gcccaatgaa
     3301 gattattttc ttcatcaaag cgtgctttta attctaccat cacagttact tgttttccat
     3361 cacttgcagc atcaattaaa gcttgaacta tattggaatt tttttcgact ctataaagtg
     3421 tcattcttat ggaaattact tcaggatctt tgcttgcttc tttgataaat ttataaactg
     3481 gatcaaaact ttcaaaaggt tgtatgatga gtatatcttc tttttctaca gcgtcaaaaa
     3541 tagataaatt ttcatcaaaa ggtggtaaag ttttaggcgt gtaaagtggg cttaaaagat
     3601 gcgtaaaggt tttatttcct gcgatttgcc aaaggctagg gagattgagt aaaatagaat
     3661 attcataaac atctttatga aaaattttca tgtgagtatt aagaaattct acgatttgct
     3721 catctgcatc tttttgaatt tgcaatctta caaaagctcc ttttctgcga agttttaagc
     3781 cttgttctaa aatcatcata aaatcatcag cttcttcctc ttctattacc atatctgcat
     3841 ttctagtcac tctaaatgct gctgaagcta agagtttata gcctggaaaa atttcttctg
     3901 cgtgttgatg gactatactt tctataggaa cataaatatt tgcacttact tcataaaaac
     3961 gaggtaaaac tctcggaatt ctaatcattc caaattttac aagttcagga tgcgctttat
     4021 cgcaaatttt aaccgctagt gaaaaagata agttgtttaa atgcggaaag gggtgagtag
     4081 catcaacagc tattggaaca ataacaggaa aaatattgga gaaaaaatac tcatcacatt
     4141 tttgttttaa attttcatct aaattttcat aatgttttat gaaaagattt tctttttcta
     4201 attcacttgt gatttcatta aaataacgct ccaaaagctc tttttcttgg tgtaagtatt
     4261 tgcgtatggc ttttaattgt tgcaacggtg tcatttcatc gctactgctt gcattaactc
     4321 cagctgaaaa aagttgtttt aagcctgcga cgcgtatcat ataaaattca tctaaattag
     4381 tgcaatatat agctataaat tttaattttt ctaacaaggg taaattttta gaacattggt
     4441 ctaaaacacg agaattaaag cgaagccaag aaagttcgcg attgataaac atatcaggac
     4501 ttgtttgcat taatttttcc ttttttagtt gtattttatc atttattttg aaattattga
     4561 ataaaagttt taaatttttt aggtta
//
LOCUS       DARATF010000112         4557 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.112, whole genome shotgun sequence.
ACCESSION   DARATF010000112 DARATF010000000
VERSION     DARATF010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4557
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.112"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..229
                     /locus_tag="SB502_001606"
     CDS             <1..229
                     /locus_tag="SB502_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0435011.1"
                     /translation="NKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFH
                     VIFITLSSEDSFFEQGVKFEVISFDKFSLGF"
     gene            complement(226..957)
                     /locus_tag="SB502_001607"
     CDS             complement(226..957)
                     /locus_tag="SB502_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEG0435012.1"
                     /translation="MKPIIIFLSLFLIPLFADDLKNGFGEEYYKLDIDQKRQIFFIKM
                     NEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQTNLEKLITIKNKYRIENLYDFAE
                     YKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHK
                     IKIFDSLQDSVYSYVLNLNRHFAYEKFRDARAKFASEGKEITGLEAIKTLDSYSERKG
                     YYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(932..1681)
                     /locus_tag="SB502_001608"
     CDS             complement(932..1681)
                     /locus_tag="SB502_001608"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEG0435013.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGGDGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAK
                     VNQDKVEVSLGKIKSVQNTFEELGKTWQLCDTGVPHLVHFCQNLDEFDTILCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFTYKNEELFFEGKVKYCFEANYNFS"
     gene            complement(1678..2283)
                     /locus_tag="SB502_001609"
     CDS             complement(1678..2283)
                     /locus_tag="SB502_001609"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEG0435014.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENA
                     LELEKIFSPFNLKNLLTKEKKIDRKILGEIVFNNKEAKKTLENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKVRLD
                     SQIDIEEKLKKADFIIKNTNSYVDFRQECVKVIQEISKGKM"
     gene            2344..3333
                     /locus_tag="SB502_001610"
     CDS             2344..3333
                     /locus_tag="SB502_001610"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEG0435015.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE"
     gene            3904..4305
                     /locus_tag="SB502_001611"
     CDS             3904..4305
                     /locus_tag="SB502_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435016.1"
                     /translation="MALIFPFLKAFYYEIARTTKQKYFTYAFNTFYLGLLTLIIGIGL
                     VFLLASLVFWILAWVKFKEFDEQELSNLEERLAKAQKKVFDFDLKWIKITMASFIILN
                     LLVLTFSFILEVISFEDFRFYYTKKLYFTQP"
BASE COUNT         1422 a          628 c          726 g         1781 t
ORIGIN      
        1 taacaaatac tttaactttt atagccaaat atctaaaatt gcttatattt caagtccaac
       61 tttagatatt gatttgatta aattacgtgc taagaaaatt ttaccaaagg ctttagaact
      121 tggaattttt catgtgattt ttatcactct ttcaagcgag gatagttttt ttgagcaagg
      181 ggttaaattt gaagtcatat cttttgataa attttcactt ggattttagg tgttgtttga
      241 gtttgtatcg tatttttcaa ggttgtatcg tttgatgatt tttgtaataa gattgatata
      301 atatcccttg cgttcagaat aagaatctaa agttttaata gcctctagtc ctgttatctc
      361 tttgccttcg cttgcaaatt tagctcttgc atcgcgaaac ttttcataag caaaatgacg
      421 atttaaattt aaaacataag agtaaacact atcttgcaga ctatcaaaaa tcttaatttt
      481 atgtttttta tctggatgtc ttaaatcagg aattaaacct ttctcacccc aagtccattc
      541 tccaaaaaga ttatttgctt ctcttgcgaa gcgacttgta cctgtagcac tttcaactaa
      601 agcttgggct atacccatgg attttggaat tttttgaata cgttttttat attctgcaaa
      661 atcataaaga ttttcaatgc gatatttgtt ttttatcgtg ataagttttt caagatttgt
      721 ttgatttgaa gtcctaaagc ctgttttgta agcatcttta aaaaaggctt cgataaaagc
      781 tctttcttgt tcaatttttt taaagctttg atcaaacatt tcattcattt ttataaaaaa
      841 aatttgtctt ttttgatcta tatcaagttt gtaatattcc tctccaaagc cattttttag
      901 atcatcagca aaaagtggga ttagaaaaag actaagaaaa attataattg gcttcaaaac
      961 aatactttac ctttccttca aaaaacaatt cttcattttt atatgtaaac ccaacctctt
     1021 caccactttt aggagttatt ttaactttat tttgtacttt tttatttaaa aatgccagat
     1081 aaaaacaagc ccccattcct gtgccacaag ctaaggtttc atcttcaact ccgcgttcat
     1141 aggtacgaac ttttaaatga ttttcatcta aaatttttac aaaattaaca ttggcattat
     1201 atttttgtct cattttttga caaagtattg tatcaaattc atctaaattt tgacaaaaat
     1261 gcactagatg tggaactcca gtgtcgcaaa gttgccaagt ttttcctaat tcttcaaaag
     1321 tattttgcac gctttttatt ttgcctaaag atacttcaac tttatcttga tttacctttg
     1381 cttttattat tcctgcaccg gttaaaaaac tcatgttagg atttattttg ttaatatgat
     1441 gtgcaaaatg tgccgcagcc cttgagccat tgccacacat agcagccctt gagccatcgt
     1501 tattataaaa ttcccattca aagtcgtatt tttcatgagg caatatcacg ataaagccat
     1561 ccccacctat gccctcataa cgattgcaaa gttctttagc taaagcactt ctatcttctt
     1621 ttctatcagc atttgttatg acaaaatcat tcccacttgc acaatattta taaaatttca
     1681 catttttcct ttagaaattt cttgtattac tttaacacat tcttgcctaa aatcgacata
     1741 agaattagta tttttaatga taaaatctgc ttttttaagt ttttcttcaa tatctatttg
     1801 agaatcaagt ctcacttttg cagcttctaa gctgagctta tctctttgca tgattctttt
     1861 aaggcttaat tctttaggtg tgtaaattac aatgactttg cctaaatttt cataagcacc
     1921 gctttcaaaa aaaagaggaa tttctacaaa aaaagcttta ttttctttat ctagaatttg
     1981 catttgttct aaaattttag ctcgaatttt aggatgagtg aaattttcta aggttttttt
     2041 agcttctttg ttgttaaaaa caatttctcc aaggattttt ctatcgattt tcttttcttt
     2101 tgtgagtaaa ttttttaagt taaagggaga aaaaatcttt tcaagttcta aagcattttc
     2161 atctaaaatt ttatgagcga ttttgtctgc gctaatgctt ttaaagccta aagaattcgc
     2221 tatttctata aaagtgcttt taccacaagc aattgaagcg gttacaaaaa aagcattttt
     2281 catcttatgc cttattaaaa cttttttcgt taaaatacct ttttagttct taaaggaaaa
     2341 taaatgaaaa tttcatatga agatgcaggc gtaagtatag ataatggaaa tgcctttgta
     2401 gaggctataa aacctttggt taaagaaact tttaatgata atgttgtagg cggaattggt
     2461 tcttttgctg gtgcttttag aatgccaagt ggttttaaaa agcctgtgat tttaggtgca
     2521 acagatggtg ttggtaccaa gcttcgcttg gcaattgatg ctaaaaaata tgatactata
     2581 gggcaagatt tagtagcaat gtgtgtgaat gatttgattt gtaattttgc tacgcctttg
     2641 tttttcctag attattatgc tacagccaag ctcgaagtag aagtagcaaa ggctgttgta
     2701 tcaggcattg ccaagggatg taagatggca aattgtgcat taatcggcgg agaaactgct
     2761 gaaatgcctg gaatgtatgc aaaagatgat tttgatcttg cgggttttgc agtgggtatg
     2821 gctgaagaag atgagatcga tagaagtaaa tttgttaaaa atggtgatat tttattggca
     2881 cttcctagtt caggacttca ttcaaatggt tattctttag ctagaaaagt actttttgaa
     2941 agtttaaaat taaaatttga tgacaagata gagggtaaaa atttaattga tattttatta
     3001 gagcctacaa ggatttatgt gcgtgatttt cttacattaa agccttatat tagtgctcta
     3061 gctcatatta cagggggtgg tttagtagaa aatttaccac gcgttttgcc tcgtggtatg
     3121 ggtgcaacta tacgcaaaca tcatcttaaa actcctgaaa ttttttatac tataggacag
     3181 gctgtagaag aaagcgaaat gtatagaagc tttaacatgg gagtgggttt agtaatggtt
     3241 gtagatcctt ctaatgtaag taaggtttta gaaaattcag atgcctttat tattggcgaa
     3301 atttgcatta atgaaggtat tgttttagag tgaaaacaaa ttattatgat tatttatgtg
     3361 ctaaaatgta tgtaattttg cccataaaag cccataaaga caaactaaaa ttttatcttt
     3421 cttatgtaaa taagaaagat aaaattttta gagttaatgt gtggaagtgg gcggttttga
     3481 taaaaattgc caaagatgat aaaacgaaat atttttgttc gaatgtatta aataaagggt
     3541 aaaatgcaca atttaaatga agctttgttt caaaaaaaga taaaagaaat tcgcttaaaa
     3601 gcaatagcga gtattatttg tgggttttta ggtatcattc cttatcttgg agttttattt
     3661 gttcttgcga gttggatttt attttttatt gtgctttatg atttaaaaat ctatggtggt
     3721 gctaaaaatt tgtttaagaa tttccttatt agtgtaggga ttggattttt tggtattctt
     3781 gttaatacaa gtattttatt tgcaatgcta aagcctagaa ctggcatttt tggtgggctt
     3841 tattttaatc aagataatat ttttatggct attgctatat ttttagtatt acattttgct
     3901 attttggctt taatttttcc ttttttgaaa gctttttact atgaaattgc tagaacaaca
     3961 aagcaaaagt atttcactta tgcttttaat accttttatt tagggcttct tactttgatt
     4021 atcggcatag gcttggtgtt tttgctagca agtttggttt tttggatttt agcgtgggtc
     4081 aaatttaaag aatttgatga gcaagaactt tcaaatttag aagaaagatt ggcaaaagca
     4141 caaaaaaagg tttttgattt tgatttaaaa tggattaaaa tcacaatggc ttcatttata
     4201 attttaaact tgctcgtttt aacattttcg tttatattag aagttattag ctttgaagat
     4261 tttaggtttt actacacaaa aaaactttat tttacacagc cataatccta gctttgctta
     4321 gtgtgttttt gttttgtaaa aagataaaaa attacaaact ttttatttat tttttcatat
     4381 ggcaaggttt aagtgttttt ggtagtcatc ttctttttat tcctgatttt atggtagatc
     4441 aaccaccaga aattatatat ggaagtttaa acataatatt aagtctatgc tatattattt
     4501 ttgctttttt attttttaaa attttgattc aaattacaaa ggaaaaactt ttttatc
//
LOCUS       DARATF010000113         4488 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.113, whole genome shotgun sequence.
ACCESSION   DARATF010000113 DARATF010000000
VERSION     DARATF010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.113"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            7..234
                     /locus_tag="SB502_001612"
     CDS             7..234
                     /locus_tag="SB502_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435017.1"
                     /translation="MTLIIENVNENFLPAFKGLAKSINAKCKISKPKLSSFESKILNA
                     SKELDKEKKVNTALSFNSHQDFVKAYQNGKI"
     gene            221..502
                     /locus_tag="SB502_001613"
     CDS             221..502
                     /locus_tag="SB502_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HEG0435018.1"
                     /translation="MAKYKIYYHKDFIKAYKKISDEERKITDEVIVKLSNDENLEPKY
                     KDHQLKGVLKDFRECHIKSNLLLIYQKHNNELELNILKLGSHSKLFKKY"
     gene            complement(770..3596)
                     /locus_tag="SB502_001614"
                     /pseudo
     CDS             complement(770..3596)
                     /locus_tag="SB502_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807409.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
     gene            complement(4285..>4488)
                     /locus_tag="SB502_001615"
     CDS             complement(4285..>4488)
                     /locus_tag="SB502_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002790984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435019.1"
                     /translation="NYLRLLNDFNTLSKIELINILESLSLYNLSTLMQTMQTIQSKNE
                     YNSKDFDKDSIFLSNMIMNVRLK"
BASE COUNT         1474 a          792 c          685 g         1537 t
ORIGIN      
        1 ttgcttatga ctcttattat tgaaaatgtt aatgaaaatt ttttacctgc attcaagggt
       61 ttagcaaaaa gcataaatgc caaatgtaaa atttctaagc ctaagttgag tagttttgaa
      121 agtaagatat taaatgcaag caaagaactt gataaagaaa aaaaagtcaa tactgcatta
      181 agctttaatt cgcatcaaga ctttgtgaaa gcttatcaaa atggcaaaat ataaaattta
      241 ttaccataaa gattttataa aagcttacaa aaaaataagc gatgaagagc gtaaaataac
      301 tgatgaagtt attgtaaaac tttctaatga tgagaattta gaacctaaat ataaagatca
      361 tcaattaaaa ggtgtattaa aagattttag agaatgtcat ataaagtcta acttgttatt
      421 aatttatcaa aaacataata atgagttaga gctaaatatt ttaaaactag gtagtcatag
      481 taagttattt aaaaaatatt gaaaggaata aagatggata aatgtaggaa aaaagcaaaa
      541 gtgactacaa ccgaaaaact catacttgtt ctttggcttt cttgcggagt tgcagctatt
      601 gttttgcttt tgtgttattc cttgctaaaa atataaaaat agttccctat gatgagaaaa
      661 agcatggggg aacaagtgaa attgggggat atatagaaag cgatcctcgt aaatttgatt
      721 atatattcgg tgctatacga gatcactaag cctaactaaa aagctagact tattttttgc
      781 tcatagcatc aaataaacct tgagcttctt ttgcaagctc attacctgat ttacttgcat
      841 cttgtattat ataagagcta ggatttactc ccattctcct gttagcatct tgttctacta
      901 tggcatcttt agcactatta ttgaccacat tagaagtact tgttccttga tttttgaaat
      961 tacttatagc agccccactt tgttggttaa attcatttct tatattatcc ccccccctgt
     1021 tgttcctaag ctgtttaact tattttgatt agctactgca tcattattat gagcattatt
     1081 agctcctaca cttgaaggac tgtaataaga tttattgcta acatcatgat ttctatcagc
     1141 atttggctta gctgtattca tattagcata atgcaacaag ccttgcaaat ctccccttgc
     1201 ggctaagttt tctaaccctt tagctgcagc agcaacttgt tgttctctag ttccacccaa
     1261 attattttca gcaatgtaat tttcagccat attaggtaaa attacttgcc tgtatagctt
     1321 cactgtattg acttgcttca ctataagaat gtgctttttg tttggcatca gcaaattcac
     1381 tacctgtgct tgtagataga gcattagaat aagcagaagc cacactatca ttagatttaa
     1441 tgatattgcc aagtttttca gcatacattt tatcaaatgc agcctaccct tctttactta
     1501 ggcttcttga atattcttgt gtttcagttg agcctgtgcc tattgaagct gtccctttaa
     1561 tttctccacc tatttttcca ccatttccaa agatttcaat ccctgctgag ccactagcat
     1621 aagcgctaat acttccttct aaagcttttt tgtctgtttc agagaagcta gatttatcgc
     1681 ttaatgcttc attcatagtt tcttttaaag ctttcgtttc tgctttctca attgctttag
     1741 tatcttctac tcctgcacca tgatttctaa gataatcaga ggtaataccg tgattaatgc
     1801 ctgttttgtg agtatcggca atagaattag caagagaatc ttgtctagtt tgagtttcgc
     1861 tttgtgcgtg ttttgcatca agtcctattc atattagaaa tttcaccatg atttcccaaa
     1921 gcaaaacttg tacctgtatt cacatctcta gctgttgttc caccccctgt tatactagac
     1981 atgctaaatc taccaccccc tgcacttata gcactttgca agctcatcac ccctgcattc
     2041 atcgcccaaa cttcatctcc tctaggagca gcaatgctag tttgtgtaga taaggcttgc
     2101 tgatttgcaa agcttccagc agctcttgaa gcacctgtta gagcttgaga taatccagaa
     2161 gcaaaagtta caaatccttg ttcacttgct ttagctatag cataagctaa aacaggagta
     2221 ctcattacaa gataattcat gaaatttgat ctatttgcta cttctttgaa tataagaatg
     2281 ttatctccta agcttaaagc tgcttttcca cctgttatca cctgtgcaac attcataaga
     2341 ttaaaatcat ttataaaatt aataatacaa agtataggag tccaaagtac tatccaaata
     2401 catagagtaa aaaacatctt aatatgagca taagagccaa acacaataga aagcaaagca
     2461 acaagccaag acaaacctat gataatagct gttaaataag ctttagctaa aggcaaataa
     2521 gtttgtgcca agtgtccttg tgcttgcata cttgcataaa attgctgatc cgcataagca
     2581 gtatttgcag ccacagaagc aggatttaaa cctactgatt tagcggtatt aatgattgca
     2641 tcttgagaag caagcattat catggattgt tgcaaataag atctagcact tacagcttgt
     2701 tcgttataga tttgtgcagc gcctaagaac ttttgctcat aatttgccat atcattcgcc
     2761 ataccaagca aagcagcatg aatcttcata gcttcatctg tatcgttttt aatcatttca
     2821 acgatttgag gacctgcatc agaacaaggc acaacacttt gtttttcaat attattgtta
     2881 ttttcaaaca aaggagtaag ctgagagcca ttgcctatgt ttgtgaaaag atcttgtatt
     2941 aaattatcag agttttgaaa aagatttcta ccttgttgat taagcaagat acctactgaa
     3001 acgcagtttc taaaataaaa atcaatattt ttttgcaaag ttgcatcaat agccgaaagc
     3061 tttaagcttg gcaaagtact catcacttga agtgaaaaac ctaaacctgc attagaaaaa
     3121 tttgtagatt gtggagttga aaaatgtttt tccatagctt ctaggataac cttctcaaat
     3181 tgcgtcatca atgcaaagct ttttcctata cctataggaa tttgagaaat gacataatct
     3241 ttgctagtga cttcatcgtg aatcatgaag cggtgattat tgtcatttgg tgcttttaaa
     3301 aacatgtacc acactacagc aaaaagcata aacatttttc caaattcaaa cacaggactt
     3361 gtttgtccat ccattgcttt tttgatactg aaaagcaata atgaaatagc caaggctgca
     3421 ttaacgatat aatctgtttc agtggttata cctttaaccg cctgcatgat ttcattcatc
     3481 acatcgccat aaccccaagt atagattaga tttccattag ctatgtttgt agcaccaaac
     3541 aaaaatgaag gtgcaaaaaa caaagtgcta aaaaacaaaa agtaaaatct tttcatggac
     3601 tatattaaag aagttaaaga gtttatttgg tataattata aaagggtgca acgccaaagg
     3661 gctgccaccc tttagcgtta atttaccacc cagaagggag gtgagtttaa tgctcaaaat
     3721 tgttctaata attatactct taatgctttg ctatgtcaag gcttattgag tatcccctgc
     3781 ttttgcaggg tttagaacaa tccctttggc ttacaccaaa caaactttta actaagcttc
     3841 tcttcttcta ttgaatttct atattatttt atatttttaa tatttgcacc aaataaaaat
     3901 gaaggtgcaa aaaacaaagt gctaaggaat aacaagtaaa atcttttcat ggactatatt
     3961 aaagaagtta aagagtttgt ttggtataat tgcattaagg gttttgccac aaggctgcaa
     4021 ccctgtggca aaatcacgcc ctagaaaggg ggtgaaacta tgtttcgttt cgtacttata
     4081 attatactaa tttgtataat tactgtcaag gcttattagc cttgcccctt ttcttaaggg
     4141 gcgaaactcc cttgtggctt gcaccaaaca aacttttaac taaacttctc ttctttctat
     4201 taaatttcta tattttttta tattttttat ttgaactaaa taataaactt aacaagattt
     4261 aaatttacca aatctactat ctttttactt caatctcaca ttcataatca tattagataa
     4321 aaagatacta tctttatcaa agtcttttga gttatattca ttttttgatt gtatagtttg
     4381 catagtttgc attaaagttg aaagattgta taaacttaaa ctttctaata tatttatgag
     4441 ttctatcttg cttaaagtat taaaatcatt taacaatcta agataatt
//
LOCUS       DARATF010000114         4410 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.114, whole genome shotgun sequence.
ACCESSION   DARATF010000114 DARATF010000000
VERSION     DARATF010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.114"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..456
                     /locus_tag="SB502_001616"
     CDS             <1..456
                     /locus_tag="SB502_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEG0435020.1"
                     /translation="FYEKIEIFYDQNMLIAKNENFEFFTKLINDKFPDYEKVIPKTFK
                     QELSFSTEDFIDSLKKISVVTEKMRLYFNKDKIIFEGISLDNMEAKTELEIQTGVSEE
                     FNLTIKIKYLLDFLTSIEEEKFTLSVNEPNSAFIVKSQGLSMIIMPMIL"
     gene            485..2794
                     /gene="gyrB"
                     /locus_tag="SB502_001617"
     CDS             485..2794
                     /gene="gyrB"
                     /locus_tag="SB502_001617"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEG0435021.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQ
                     GHNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEANYIFDKIKDRGLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(2820..3161)
                     /locus_tag="SB502_001618"
     CDS             complement(2820..3161)
                     /locus_tag="SB502_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HEG0435022.1"
                     /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQNKTH"
     gene            complement(3164..4402)
                     /locus_tag="SB502_001619"
     CDS             complement(3164..4402)
                     /locus_tag="SB502_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HEG0435023.1"
                     /translation="MKQNNQKEDRRNFLKNIGFGLLGISVLSNFSFENFLGSKALAKE
                     LPDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLH
                     KGWTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYG
                     AVACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDE
                     TLIAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVP
                     VNPVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEV
                     YISNDYGVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLA
                     QWNPGGYINNACHRVNIYGV"
BASE COUNT         1545 a          663 c          732 g         1470 t
ORIGIN      
        1 ttctatgaaa aaatagaaat tttttatgat caaaatatgc ttatcgctaa aaatgaaaat
       61 tttgaattct ttacaaaact tatcaatgat aaatttccag attatgaaaa agttatacca
      121 aaaactttca aacaagaact cagtttttca actgaagatt ttatagatag tcttaaaaaa
      181 atcagcgttg taactgaaaa aatgagactt tattttaaca aagataaaat catctttgaa
      241 ggtataagtt tagacaatat ggaagcaaaa acagaacttg aaattcaaac aggagtaagt
      301 gaagaattta atcttactat aaaaatcaaa tatttacttg attttttaac ttctatagaa
      361 gaagaaaaat tcactttaag tgtaaatgaa cctaattcag catttatagt caaatcccaa
      421 ggactatcaa tgattatcat gcctatgatt ttgtaataaa acaagtaaaa gataaaggaa
      481 aaatatgcaa gaaaattacg gtgcgagtaa tattaaagtc ctaaaaggct tagaagctgt
      541 tagaaaacgc ccaggtatgt atataggaga tacaaacata ggcggacttc atcatatgat
      601 ttatgaagtt gtggataatt ctatcgatga agctatggca ggacattgtg atactataga
      661 tgtagaaatc actactgaag gaagctgtat agttagtgat aatggtcgtg gtattcctgt
      721 tgatatgcac ccaactgaaa atatgccaac tttaactgtt gttttaactg tcctacatgc
      781 agggggaaaa ttcgataaag atacttataa agtttcaggc ggtttgcacg gtgttggggt
      841 ttcggttgta aatgcactct ctaaaaaact tgtagctaca gttgaaagaa atggagaaat
      901 ttatcgtcaa gaattttcag aaggtaaagt tatcagtgaa tttggtgtga taggaaaaag
      961 taaaaaaaca ggaacaacta tagaattttg gcctgatgat caaatttttg aagtgactga
     1021 atttgattat gaaattttgg ctaaaagatt tcgtgaactt gcatacttaa atccaaaaat
     1081 cactataaat tttaaagata accgcgtagg caaacatgaa agttttcact ttgaaggtgg
     1141 aatttctcag tttgttacag acttaaataa aaaagaagct ttaactaaag caattttctt
     1201 tagcgtagat gaagaagatg tgaatgttga agtagctttg ctttacaatg atacttatag
     1261 tgaaaattta ctctcttttg taaataatat caaaactcca gatggtggaa cacacgaagc
     1321 tggttttaga atgggtttaa ctcgtgtgat aagtaactat atagaagcaa atgcaagtgc
     1381 tagagaaaag gataataaaa tcacgggtga tgatgtgcgt gaaggtttga tcgctattgt
     1441 gagtgtaaag gtgcctgaac cacaatttga aggacaaacc aaaggaaaac ttggttcaac
     1501 ttatgtgcgt cctatagttt caaaagcaag ttttgaatat ttgactaaat attttgaaga
     1561 aaatcctatc gaagctaaag ctataatgaa caaagcctta atggcagcta gaggaagaga
     1621 agcagcgaaa aaagctagag aattaacgcg taaaaaagaa agtttaagcg taggaacttt
     1681 accagggaaa ttagctgatt gtcaaagtaa agatccaagt gaaagtgaaa tttatcttgt
     1741 ggaaggggat tctgcaggag gttctgcaaa acaaggtaga gaaagatctt ttcaagctat
     1801 attgcctttg cgtggtaaaa ttttaaatgt tgaaaaagca agattagata aaattttaaa
     1861 atctgagcaa attcaaaata tgattaccgc ttttggctgt ggtataggtg aagattttga
     1921 tctttcaaaa cttagatatc ataaaatcat catcatgaca gatgcggatg ttgatggatc
     1981 acatatacaa accttgcttt taactttctt cttccgtttt atgaatgaac ttgtagcaaa
     2041 tggacatatt tatctagcac aaccaccttt atatctttat aaaaaagcta aaaagcaaat
     2101 ttatttaaag gatgaaaaag ctttgagcga atacctgata gaaacaggaa tagaaggttt
     2161 aaactatgaa ggtataggaa tgaatgattt aaaagattat ttaaaaatcg ttgcagctta
     2221 tcgtgcgatt ttaaaagatc ttgaaaagcg ttttaatgtg atttctgtga tacgctatat
     2281 gatagaaaat tcaaatttag ttaaaggaaa taatgaagaa ttatttagtg taatcaaaca
     2341 atttttagaa acacaaggac acaatatctt aaatcattat atcaacgaaa atgaaattcg
     2401 agctttcgtt caaactcaaa atggcttaga agaacttgtg atcaatgaag aacttttcac
     2461 tcatccacta tatgaagaag caaattatat ttttgataag attaaagata gaggcttgga
     2521 atttgataaa gatattttag aagttcttga agatgttgaa accaatgcta aaaaaggtgc
     2581 tactatacaa cgctataaag gtttagggga aatgaatcct gagcaacttt gggaaaccac
     2641 aatggatcca agtgtaagaa gacttttaaa aatcactatt gaagatgcac aaagtgcaaa
     2701 tgataccttt aatctcttta tgggtgatga ggttgaacca agacgcgatt atatccaagc
     2761 acacgctaaa gatgtaaagc atttggatgt gtaaatttat cattgaagaa atgatttctt
     2821 caatgagttt tgttttgtaa gagtatagct agaggaattc ttcttcttgt atcgtatttt
     2881 tctccataat atttttcaag ataatttaaa attttttctt catcttcagg ttctatttcc
     2941 caaagtcctt cactatcttg catccatctt atagctgcta accaagcttt tctacttgca
     3001 tgcatattag taatgagatt ggatccatga caagctaaac aatttgcttc cactaaaggt
     3061 gaatcaggat cgataatcaa tcctgtatca gggttaattt caagattttg agcccaactt
     3121 gcacttaaaa acaatgctaa gatcaatata atttttttca tacttaaact ccataaatat
     3181 taactctatg gcatgcatta ttgatatatc ctcctggatt ccactgtgct aaaaccatag
     3241 gttgactgtt accttgacta tcgatagctc ttgcccaaat ttcataatat ccttttgttg
     3301 gtattgatat ttgagcactc catttttgcc atgctaatct atttaatggt ttttctacct
     3361 ttgctttagt ccatgttacg ccataatcat tgcttatata aacttcacta acttcaagtt
     3421 ctccagccca agctttacct ctaacttcaa attttttatt tgcttttatt tcagaaccat
     3481 ttttgatatt agtaattaca gatcttatag gcattgattc tatgattttc atctcgcctt
     3541 tatagttaaa atctcctggt tttaccggat ttacaggaac tttataagaa ccttccattt
     3601 tttcaccatc atgaatttta tttcttactg aaattttata aagccattta ccacttgtac
     3661 ttgcagggta accaccacaa acaagtctaa gtggatagcc attgactaaa ggaatatctt
     3721 tgccttcata agcccaagct attagagttt catcttgtaa agctttagaa ataggaactc
     3781 ctctactaat aggtgaagtt tcttcaccat ttaattttgt atctatgcca taatatccga
     3841 tataaaccgc atcatttttg atgccacaat cttttaaaat atcttttaaa cgtactcctg
     3901 tccatctacc gcaagctact gcaccataac cccattgagt tccttttgtg ctaggtataa
     3961 cttcggatct accatttcca ccgcattcaa ctgttaaggc ataagtatag gttttaaatt
     4021 tcttttttaa atcttctatg gtgtaagatt ttttattgat aatgctttct ccatcgattt
     4081 ctaaagtcca acctttgtga agtctttctt ttatcgtttc taggcttggt ggtaagccat
     4141 tatttctaac aaagaaattt tcaggtttgg taaaatcaga atcaagagca taaatttcag
     4201 tttctgctgt taatggtttt tcgccatggt agataagatc ttttttacct tctattttaa
     4261 aatcaggcaa ttcttttgcc aaagccttac ttcctaaaaa attctcaaaa gaaaaatttg
     4321 acaatacact gatgccaagc aaaccaaatc ctatattttt taagaaattt ctgcgatctt
     4381 ctttttgatt gttttgtttc attgaaatat
//
LOCUS       DARATF010000115         4297 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.115, whole genome shotgun sequence.
ACCESSION   DARATF010000115 DARATF010000000
VERSION     DARATF010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.115"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..480)
                     /locus_tag="SB502_001620"
     CDS             complement(<1..480)
                     /locus_tag="SB502_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435024.1"
                     /translation="MGEDITFSIFWGLVGFIFRLVTIDTILYITALSVLIAFSIINYW
                     MRINIKEFVKSYFLISFIIFFMAIVIIFYLSYDLEFYKSLVLLDPPEIEKLSPQEYRV
                     RNYFKFLTFATMFFLVITFIIFPCLLQAYLFKCYSTGEKRKKLSWLIGFVCNIFLLIA
                     "
     gene            complement(481..2013)
                     /locus_tag="SB502_001621"
     CDS             complement(481..2013)
                     /locus_tag="SB502_001621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435025.1"
                     /translation="MDEELFWENIVPVGHINEETLKSQIYINNINFSTLQYDETVLPT
                     ELECCYNEFKYYQKSNNEIATLGWAISYQLQVLWQNSPKIDTIQNYHLPVKQNKPNNP
                     QAEQRLKEIQNFLQSKGIEPLILHYTPYPNNTQTQEMKRLRQNSERFSRHVDNKTNEV
                     REERRSIKFYTTLDWDKFYSHFPIIKRLSKKFHTKEDIYTQNFTKQIEIILQKTHNIL
                     ILKNLPQGEYKFDFAIDIKENRSDKNEESYFIIKENDEILKDYKRILDCKPYELDTLN
                     CQYIGVGDDEFFRQIWQNLGINIAEKFKVDFSYARLDKFIFATSPFGLTYNTYETLEQ
                     TYDELMQDLSLYACSGKFSFNFVPSKLSIKKEIQGDREKVLYRVDEMLVYVYDSFDFL
                     DQGHEFDDKGNFIKLGQPVGAWDFNEKSFSIEGSLYQMGTYREWLEWEIDGYKIDCSI
                     SPQRILQSPKTKQYYLYNQDYQDYQKFTPYGLDFRLYSKDFITKLDFKDKAYNVLYNT
                     GV"
     gene            complement(2155..2472)
                     /locus_tag="SB502_001622"
     CDS             complement(2155..2472)
                     /locus_tag="SB502_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002868011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435026.1"
                     /translation="MIGKDFLYSIHKDKKSIYLFCENKSIIDCQSIYDELYKLEATTD
                     FTFEELQNYQAYIFLNSTLLTGSNELPNNPFYFGELDQDNTIKQDTPSYYFSPSNEFK
                     CKS"
     gene            complement(2480..4075)
                     /locus_tag="SB502_001623"
     CDS             complement(2480..4075)
                     /locus_tag="SB502_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEG0435027.1"
                     /translation="MKTQINNLKDYAELAWASYFYFDFLNTRNIFELDFNQEKIQEEN
                     SLRGYREIKVNLEHVVSQKHKDKEVLIDLRQDDAWQSKMLNFFDEKTNFDKLNGEFGE
                     LQTKNFIQRYEVQFHQPNTTSGFSATLFYDKEKDEFIVGFRGTETDNFISSIQDIVQD
                     ITLSLNGNIQSSFLLEFLEQVNKIIKNKHKRIIFVGHSLGGYLAQMALIYCDIKYKDK
                     LSFSPNEVYTFNAPSVYGWNFPNIAINPNTIKIMQDLLGKYTIDVSEKITHIYDNGKI
                     EIIASAQYGASNALGIYTGKNDHSIKPLVNTLYFYSYLLELDANYNKVKDKSLSECIE
                     YLNHFMKNIQIYTETFVLKNNAINNKNFALKNGPLGLFRSSPEKINHFEYFLSLIATI
                     MQETNGILEELGDNYYASYKAPTISQTKIIDFILKAQKKEKYILILDKNDFNKYRKDC
                     SFINNQENLAHKIAIGEFRIFIVVYKDMKCLENINNITKIYGYNSKSYKIKDQIWDEQ
                     YLGGVCKISQALYFNGKAKIGII"
BASE COUNT         1502 a          608 c          514 g         1673 t
ORIGIN      
        1 cgcaattaat aaaaagatat tacacacaaa ccctataagc caacttaatt ttttgcgttt
       61 ttctcctgtg ctataacatt taaataaata agcttgtaat aaacaaggaa atatgataaa
      121 tgtgattact aaaaaaaaca tagttgcaaa ggttaaaaat ttaaaataat tacgcactct
      181 atattcttgc ggtgataatt tttcaatttc tggaggatca agtaatacaa gcgatttata
      241 aaattcaaga tcatagctaa gataaaatat gataacaata gccataaaaa agataataaa
      301 agatattaaa aaataagatt ttacaaattc ttttatgtta attctcatcc aataatttat
      361 aatagaaaag gcaataagaa cgcttaaggc tgtaatataa agtattgtat caatagtaac
      421 aagcctaaaa ataaatccta ccaaacccca aaaaatagaa aatgtaatat cttctcccat
      481 ttaaactcct gtattataaa gcacattata agctttatct ttaaaatcaa gcttagtgat
      541 aaaatcttta ctataaagtc taaaatccaa accataagga gtgaattttt gatagtcttg
      601 ataatcttga ttgtaaagat agtattgttt ggtttttgga gattgcagaa ttctttgagg
      661 gcttattgaa caatcaattt tatatccatc tatttcccat tcaagccatt ctctataagt
      721 ccccatttga tataaagaac cttctatgct aaaactcttt tcattaaaat cccaagctcc
      781 aacaggttgt cctagcttga taaaatttcc cttatcatca aattcatgtc cttgatctaa
      841 aaaatcaaag ctatcataaa cataaacaag catttcatca acgcggtata gcactttttc
      901 tctatctcct tgaatttctt ttttaatgct taattttgaa ggaacaaaat taaaagaaaa
      961 tttaccacta caagcataaa gagatagatc ttgcatgagt tcatcataag tttgctctaa
     1021 agtctcatat gtattataag taagtccaaa tggcgatgtc gcaaaaataa atttatcaag
     1081 tctagcataa gaaaaatcta ccttaaattt ctctgcaata tttataccta aattttgcca
     1141 aatttgtctg aaaaactcat catcacccac acctatatat tgacaattta aagtatcaag
     1201 ctcatagggc ttacagtcta aaatgcgttt ataatctttt aaaatttcat cattttcttt
     1261 aatgatgaaa taagattctt catttttatc gcttcgattt tcttttatat cgatcgcaaa
     1321 atcaaattta tattctcctt gaggtaaatt ttttaatatc aaaatattat gagttttttg
     1381 taagattatt tctatttgct ttgtaaaatt ttgagtgtat atgtcttctt ttgtatgaaa
     1441 ttttttactt agtcttttta ttataggaaa atgagaataa aacttatccc aatctagcgt
     1501 agtgtaaaat ttaatagaac gcctttcttc tcttacttca tttgttttat tatctacatg
     1561 gcgcgaaaaa cgctctgaat tttgccttag tcttttcatc tcttgggttt gtgtgttgtt
     1621 tggataaggg gtgtaatgta aaataagagg ttctatacct ttactttgta agaaattttg
     1681 tatttctttt agtctttgtt ctgcttgggg attattaggc ttattttgtt ttacggggag
     1741 atgataattt tgtattgtat ctatcttagg gctattttgc cacaatactt gaagttgata
     1801 gctaatagcc caacctagtg ttgctatttc attattgctt ttttgatagt atttaaattc
     1861 attataacaa cactctaatt ctgtaggtaa aactgtttca tcatattgta aagtgctaaa
     1921 atttatatta ttaatataaa tttggctctt taaagtttct tcattaatat gtcctactgg
     1981 aacaatgttt tcccaaaaaa gttcttcatc cattatttca tcctattgtt tttatatttt
     2041 agaaattcct taagcatgtt ctcatttaaa tttatagaat acctagtcca gcacattcta
     2101 gcatatttat aaagtttcat atatttggct tgttttcata tattatttta tcctttatga
     2161 tttgcatttg aattcattac taggagaaaa ataataacta ggtgtatctt gttttatagt
     2221 gttatcttga tctaattctc caaagtaaaa aggattatta ggaagttcat ttgagcctgt
     2281 aaggagagtg gagtttagga agatataagc ttgatagttt tggagttctt caaaagtaaa
     2341 atctgtcgtt gcttctaatt tataaagttc atcataaata ctttgacaat caattatgct
     2401 tttattttca caaaacaaat aaatactttt tttatcttta tgaatagaat ataaaaagtc
     2461 tttacctatc ataattttcc taaataatac ctattttagc ttttccatta aaatacaaag
     2521 cttgtgatat tttacaaact ccacctaaat attgctcatc ccaaatttga tcttttattt
     2581 tataactttt tgaattatat ccgtatattt ttgttatatt attaatattt tcaagacatt
     2641 tcatatcttt ataaaccaca ataaaaattc taaattcccc aatggcaatt ttatgagcta
     2701 agttttcttg attattaata aaggaacaat cttttctgta tttattaaaa tcatttttat
     2761 caagaattaa aatgtatttt tctttttttt gcgcctttaa aataaaatct atgatttttg
     2821 tttgactaat ggtaggagct ttatagcttg cataataatt atctccaagc tcttctaaaa
     2881 taccatttgt ttcttgcatt atggtggcta ttaatgaaag aaaatattca aaatgattga
     2941 ttttttctgg agaacttcta aaaagtccaa gaggtccatt tttaagagcg aaatttttat
     3001 tattaatagc attatttttt aacacaaaag tttctgtata aatttgaata tttttcataa
     3061 aatgattaag atactctata cactcactaa ggcttttatc tttgactttg ttatagttag
     3121 catctaattc taaaagatag gaataaaaat agagagtatt aacaagaggt tttatagagt
     3181 gatcattttt ccctgtatat atacctaaag cattgcttgc accatattga gctgaagcaa
     3241 tgatttcaat tttaccatta tcataaatat gagtgatttt ttctgaaaca tctatagtgt
     3301 attttcctaa aagatcttgc ataattttta tagtattagg gttgatagct atattaggaa
     3361 aattccaacc ataaacacta ggggcattaa aagtataaac ttcattaggg ctaaaagata
     3421 atttgtcttt atatttaata tcgcaatata tcaaagccat ttgagctaaa tacccaccca
     3481 atgagtgtcc tacaaatata attcttttgt gtttgttttt gattatttta tttacttgtt
     3541 ctaaaaattc taaaagaaaa gaagattgga tattgccatt gagggataga gttatgtctt
     3601 gaactatatc ttgaatcgag ctaataaaat tatcagtttc agttccccta aatcctacta
     3661 taaattcatc tttttcttta tcataaaaca aagtagcact aaagccactt gtagtgttag
     3721 gctgatgaaa ttgaacctca tatctttgaa tgaaattttt agtctgtaat tctccaaatt
     3781 ctccatttag tttatcaaaa tttgtctttt catcaaagaa atttaacatt tttgattgcc
     3841 aagcatcatc ttgtcttaaa tcaatcaata cttctttatc tttatgtttt tgactgacaa
     3901 catgttctaa atttaccttt atttctctat agcctctaag agaattttct tcttgaattt
     3961 tttcttgatt aaaatctaac tcaaatatat ttctagtatt taaaaaatca aaataaaaat
     4021 aactagccca tgcaagttct gcataatctt ttaaattatt gatttgagtt ttcattttta
     4081 tttcttttaa ttaaataaat tattgcaaat attataatat gtatcacaat aataattaag
     4141 tacagctcaa aattactatt atttctatta atcaatagta gcaacaaata gcaacaaata
     4201 gcaacaaata tattttttgt atttcttgct tttttataaa tcaaataata aaaataaggc
     4261 aacaatggaa aaagatataa tataacaaga aaaaaga
//
LOCUS       DARATF010000116         4296 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.116, whole genome shotgun sequence.
ACCESSION   DARATF010000116 DARATF010000000
VERSION     DARATF010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.116"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            1..399
                     /locus_tag="SB502_001624"
                     /pseudo
     CDS             1..399
                     /locus_tag="SB502_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853469.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
     gene            383..607
                     /locus_tag="SB502_001625"
     CDS             383..607
                     /locus_tag="SB502_001625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435028.1"
                     /translation="MHFVISFNITSNLVGITLGLILAESISNYFGNWRDSLSFYAWIN
                     LILLILWLFVGKDENKKEEKRIMQKILFML"
     gene            628..1203
                     /locus_tag="SB502_001626"
     CDS             628..1203
                     /locus_tag="SB502_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435029.1"
                     /translation="MIIFYIGPILFLNSLFTFLPTFYAQYASFSKELADFAKKEIPAL
                     ANFAIIFGPYLGLFFKRKNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGI
                     FYSMWFPFFFNLPSELKNSNPNQTAYIMSTFWSITFVILSFNLWVVSWSVDKTHSFTL
                     GFVYIFALIFISAILAQFVLPRRENFIQGEK"
     gene            1205..2356
                     /locus_tag="SB502_001627"
     CDS             1205..2356
                     /locus_tag="SB502_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0435030.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGTLNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLVVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GLAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2360..3100)
                     /gene="yaaA"
                     /locus_tag="SB502_001628"
     CDS             complement(2360..3100)
                     /gene="yaaA"
                     /locus_tag="SB502_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEG0435031.1"
                     /translation="MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEF
                     IKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENK
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3193..>4296)
                     /locus_tag="SB502_001629"
     CDS             complement(3193..>4296)
                     /locus_tag="SB502_001629"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435032.1"
                     /translation="FLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDS
                     GIKIEFSDFKCNADGDFIACLSPNFKTLAKDNNDEYQELFQAKNIKIRSNEIYKGEAN
                     TSISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFINKLSS
                     DSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNT
                     QTLAMDEQAINELLNIANYEQASNFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAK
                     ENLQTLKTQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYSTQGIDS
                     IEKLSINNQDATEALKIILPFIMFSMLMGGASF"
BASE COUNT         1347 a          518 c          723 g         1708 t
ORIGIN      
        1 tatttcattt tagacgcatt ggagttgaat ttatcatttt tagtgtttat gctgttttta
       61 gtatctcttg ggcagcaaca gggtctttaa tgcctttgat ttcaaatgat cttgccctaa
      121 atactcagca agctacttta atcactagta tgatagtagt tgcgaaaatt tttggtgctt
      181 catttactgc ttttttggtt tataaattcg gattaaaaaa gggatatttt ttaggctgta
      241 ttttaatgag ttcgggtatc tttttaagtt ttatagatag ttatagtggt attttgatta
      301 taagattttt aacagggctt ggttcagctt gtgctttagt ttgcttagtg cctattgcac
      361 agcaatggtt tgaaaaaaag ctttgcattt tgtaattagt tttaatataa cttcaaattt
      421 agtaggcatt actctaggac ttattttagc tgaaagcatc tcaaattatt ttggaaattg
      481 gagagattct ttatcatttt atgcttggat taatttgatt ttattgattt tgtggctttt
      541 tgtaggtaaa gatgagaata aaaaagaaga aaaaagaata atgcaaaaga tcttatttat
      601 gctttaaaat ctcgtgttgc ttggggtatg attatttttt acatagggcc tattttattt
      661 ttaaattctc tttttacttt tttaccaact ttttatgcac aatatgcgag ttttagtaaa
      721 gaattagctg attttgctaa aaaagaaatt ccagccttgg ctaattttgc tattattttt
      781 ggtccttatc ttggattatt ttttaaaaga aaaaatatct cttttaaaat aatgctattg
      841 tctggaggag cgtgtatttt tatatgcgga ttttgtatgt tgtttttaca aaatttagta
      901 ttgatacaga tttttgctgt gttatcaggc attttttatt ctatgtggtt tccatttttc
      961 tttaatctac cttcagaatt aaaaaattcc aacccaaatc aaactgctta tattatgagt
     1021 actttttgga gtattacctt tgttatacta tcatttaacc tatgggtagt atcttggagt
     1081 gttgataaaa cccatagttt tactttgggt tttgtttata tttttgcttt gatttttatt
     1141 tcagcgatct tagcacaatt tgttttacct agaagagaaa attttataca aggagaaaaa
     1201 tagaatgaat ttaattccag aaatactaga cttacaaggc gaatttgaaa aaattcgtca
     1261 tcaaattcat gaaaatcctg agcttggttt tgatgaatta tgtactgcaa aattagtggc
     1321 gcaaaaatta aaagaatttg gttatgaggt ttatgaggaa ataggaaaaa caggcgttgt
     1381 gggggtttta aaaaagggga atagcgataa aaaaatagga cttcgtgcag atatggatgc
     1441 tttgcctttg caagaatgca caaatttgcc ttataaaagc aaaaaagaaa atgtaatgca
     1501 tgcttgcggt catgatggac atactacttc tttattgctt gctgcaaagt atttagcaag
     1561 tcagaatttt aatggcactt taaatcttta ttttcaacct gctgaagagg gtttgggtgg
     1621 tgctaaggca atgatagaag atggattgtt tgaaaaattt gatagtgatt atgtttttgg
     1681 atggcacaat atgccttttg gtagcgataa gaaattttat cttaaaaaag gtgcgatgat
     1741 ggcttcttcg gatagttata gcattgaagt tattggaaga ggtggtcatg gaagtgctcc
     1801 agaaaaggca aaagatccta tttatgctgc ttctttactt gttgtggctt tacaaagcat
     1861 agtatctcgc aatgttgatc cccaaaattc agcagttgta agcataggag cttttaatgc
     1921 aggacatgct tttaatatca ttccagatat tgcaacgatt aaaatgagtg ttagagcatt
     1981 agataatgaa actagaaagc taactgaaga aaaaatttat aaaatttgta aaggtcttgc
     2041 acaggctaat gatatagaga ttaaaatcaa taaaaatgtt gttgcaccag tgactatgaa
     2101 taacgatgaa gctgtggatt ttgctagtga ggttgcaaaa gaattatttg gcgaaaaaaa
     2161 ttgtgaattt aatcatcgtc ctttaatggc aagtgaggat tttggatttt tttgcgaaat
     2221 gaaaaaatgt gcctatgctt ttttagaaaa tgaaaacgac atttatttac ataattctag
     2281 ttatgttttt aatgataagc ttttagctag ggctgcaagt tattatgcga agctagcttt
     2341 aaaatactta aaataaaaac taatctagaa tttcaagcac aatttcttcc tttaaacctt
     2401 tgatttgaat ttctttgagt tttaggtttg aaggaaggtt tgctaaaagc tctttattgt
     2461 tttttacttg gttttttgca cttatggaga gtaaaattcc cctataagct ttagcaaaat
     2521 gactgatgac tttaccattt tttacaaatt tataagtata aaatttcttt tttggggtgt
     2581 agaatttatc ataaaatcct gctctaaggt caagtatttc tttattttct aagtattcat
     2641 ctaaggcttt actaaaatgt tctttataaa atttctctat ggcaaaattt cctattttag
     2701 ccccttgctt gaatttataa aaaggtaggg tatcattagc tcttacaacg ccaaaaagat
     2761 tagaaaatat aagagtattt tctaaaatat aagcttgact ttttttatct aaagctttaa
     2821 aattaagata ttcataactt accccagtat aaagcaatat agcttcttga gtgggagctt
     2881 gttttaagtc gtgtttaaat ttatcaattt cattttcgtt tttaatgcca aaaagttctt
     2941 gtaaattttt taaacttgca tttttgataa attctccata atgctttaaa gcttccattc
     3001 tataaggaaa taattcttta aatataaatg agttttcatc gatgggattt tttgtacaat
     3061 tttcattttt gctttcacta ggggagaata aaattttcat tttagccttt tttgttaatg
     3121 ttatgaaaac attaagagca aagaaattta atcttgcttt taatgttttt gaagttttta
     3181 tcattttaaa atttaaaatg acgctccgcc cattaacata gaaaacatga taaatggaag
     3241 tataattttt aacgcttctg tggcatcttg attgttgatg cttagttttt ctatgctgtc
     3301 gattccctgt gtgctatagt cactaacagg gatgttttta aattttaaat caagattgag
     3361 tttataatca tcattttgag tgatattgtt taaaatagct aaagctttat caaagattaa
     3421 tgcttgttct tcattttgac tttgagtttt taaggtttgt aaattttcct tagcagttgt
     3481 tatatagcta ctaaatacgc cttcggtttt aagagttgaa tcaattttaa aattgtttaa
     3541 aatgatgtat ttttggattg tattgctaaa atttgaagct tgttcgtagt ttgctatatt
     3601 aagaagttca ttgatagctt gttcatccat agctaaagtt tgagtgttaa attttatacc
     3661 cttagaatca aggtaattaa gcaaatcttc ttttagattt atatttagat ttgtattgaa
     3721 atttaatttt gcgttataaa attttatatc aagattatct agataattgt tttcttgttt
     3781 gtttatagag ttatcaaatg ataaagtata agaatccgag cttaatttat tgataaaaga
     3841 tctgattttt ggatcttgtt gaaataagct tgcattgatg tcactaacaa ctttttctcc
     3901 aagtttaaaa tcttcaaaaa ccaaatttga ttgtatgctt ttttggtttt taaaaagatc
     3961 gttgtaatat tctttaatgc taattgatgt atttgcttcg cctttgtaaa tttcatttga
     4021 acgaattttg atattttttg cttgaaatag ttcttgatac tcatcgttat tatcttttgc
     4081 aagagttttg aaatttggac ttaaacacgc tataaaatca ccatctgcat tgcatttaaa
     4141 atcagaaaat tcaatcttta ttccagagtc ctgagaaaga cttgcaattt cttgtttaac
     4201 tgtttgattt agttgatttt catatttttt aactgttttt tcatctatgg aatttccgca
     4261 agctgaaaac aaaacagcta ttccaataga gagaaa
//
LOCUS       DARATF010000117         4270 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.117, whole genome shotgun sequence.
ACCESSION   DARATF010000117 DARATF010000000
VERSION     DARATF010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.117"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(3..778)
                     /locus_tag="SB502_001630"
                     /pseudo
     CDS             complement(3..778)
                     /locus_tag="SB502_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867793.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(984..2705)
                     /locus_tag="SB502_001631"
     CDS             complement(984..2705)
                     /locus_tag="SB502_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEG0435033.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNYIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSPYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVAGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            complement(2707..3435)
                     /locus_tag="SB502_001632"
     CDS             complement(2707..3435)
                     /locus_tag="SB502_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEG0435034.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKIRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMGLADMES"
     gene            complement(3571..4269)
                     /locus_tag="SB502_001633"
     CDS             complement(3571..4269)
                     /locus_tag="SB502_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEG0435035.1"
                     /translation="MFLALFLFFNSLLALSELEEGLKLYEANKFDKAYEIFKSLCEKD
                     ISKACFSLAFMYESAKGMSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNEAL
                     LAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGE
                     LVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEAC
                     AAYKELNSKDIELY"
BASE COUNT         1325 a          832 c          571 g         1542 t
ORIGIN      
        1 tttcaagctt ttatatctat aatttttgcc gaagtgtttt gagaaagaaa tttattaaat
       61 tctcctgcac tatcatcact aaatttcata ccaaaaagaa gttctaattc ttcactttta
      121 ccaaatttat tttctaataa tttttttaaa agctcgtttt tagcattgtc atctttgtaa
      181 gtttctttgt ttttgctttc gccttgaatg gctttgaagg gtttttcatc tgggttttga
      241 ccactttcat tgctttcttg ggtagaattt gagctttgtt gtttatttaa aaacctatct
      301 atctcttctt gagtaagtgg tttaacatca agtgcgtcaa taaatcgttt tttctttcat
      361 ctttttcagc aacccatatt cttgcgaatt cacccacact tgtaagagtt tttagaagat
      421 tgcctttgcg tattctggaa atcttatctc ctggaataaa ttcaatatta tcaatctcat
      481 atgctccgtt aagaatttcc cattcctctt cagttaattt atcttttcgc attcgctcaa
      541 gcaaggaatt ttcaacttct ttaacatctg ggtctccatt atagccgtat ttgttcgcat
      601 attctttact aagcatttct ccaaagtatt tttgcacaaa atcttcccaa taagcatctt
      661 cttcactttt tggctcatct tttttagtat aagtatattc attattttca tcttttttaa
      721 tgcttaaagc attatttgga taattgatat taggatagtg agaattaaaa tttaccatag
      781 aaaacccttt ttttatgata ttttattaaa ataatcttgg attccaacca ccaagagcag
      841 actccatttg cctttttgta taattgtagc tcgaataaga atttatacca ttaatcattt
      901 ttgccttcct tgatattata ctatatcgga agaaaattaa aaatttataa tcttgagagt
      961 tttcaaaaac tctcaagtta ttatcaagct aagctttttc cacttttatg atattttaaa
     1021 ataccttcag cacagcgata agccaaagct cccacagtat cagttggatt atatccacta
     1081 ttgtgttgga aatttcctgc tcctacaaca aaaagattat ccgcatccca gtgttgtaaa
     1141 taagtattaa ccacactagt ttctctatct gcacccatgg ttgttccacc tgtgttatga
     1201 gtagattgat aaggcacaac gctataatcc ttaagataag cacctttttt gattgatttt
     1261 actccttgca ttctttttgc tacctcagct gttttatctg tgataaattt atgcaaagct
     1321 ctatcttgat cggtgaaatt ataagttaag cgtaaaagtg gcataccaaa agcatcttta
     1381 taagttggat caagacttaa ataattattc ttatgaggca aagaagcacc ttgtcctgct
     1441 acggtaatag ctcttgtgaa attatagttt aatgcttttt taaattcagc accccaagtt
     1501 ggagctcctg ctggaagtgg ggctgattgt atagggcgag ttccaagctg aacgctataa
     1561 atcatagctc catgaaggaa tttttcctta gaatgatcaa aattatctcc gttaaaatca
     1621 tcactcgtag ttcctaaagc acctgaaccc atgaaggtgt taaattgctc atcaaagaaa
     1681 gctgttgtac ccatgttcat ttgataacaa taatttctac ctaaagttcc tttacctgtt
     1741 tttggatcgt attgctcacc tatgttgctt accattaaaa gcttagcatt gttaaacata
     1801 taacttgtaa gtacaactat atcagcaggc tggatatact ctttcatcgt tctagtatcg
     1861 acaaatttta cccccgttac ttttccgtct tttttaagaa tttgcgttac attactataa
     1921 gtgcgtatgg tgtatttacc tgtgctcata gcctttggaa ttactgtgtt taaaggactt
     1981 gcttttgcac catactcaca accaaaacgc tcacaatacg cacagtattg acaaggagct
     2041 aaatcttgac catcagggtt tgtatagcca cctttagaat ttgaagctgg caaacgataa
     2101 gtgtgtaaat ttgaactttt tgctgcactt tcaaatcgtt taagcatttt agtattttca
     2161 agaggttctt gtggataagg actggatcta aaagctccca ttttttccgc taaaggattt
     2221 ggttcacctg ataccccaca ggttttttca aatctatcat aataaggctc catatcctta
     2281 taagtcacgc cccaatcttg caaggtataa tcattaccta atttattacc atatctttgt
     2341 ttgcttaggg tttgaatttc aaagtcataa ggcataaacc taaaagtcca accattccaa
     2401 tgcacccctg caccgccaac attattaccc aataaaaacg aacccatttt acgataaggt
     2461 aaggctaaac cactaggatc atggcgaaaa gtcacagtgt cttttgagca atcttgcatc
     2521 aaaccataat taatcccata tctccactca tcatggatat aattaaaatt ttcagtactt
     2581 tgcatatgtc cgcgttctaa actaagtaca ttcaaacctg ctttagtaag ctctgcagcc
     2641 actatacctc cagtccatcc tgctccaact gttactacat ctactttttt taatacttca
     2701 gccattttaa ctctccatat ctgctaaacc cataggttca atgttaaaaa attcatcact
     2761 tgcaatttta tccacatagc tcatttgtgc gcctggatat tgcatcattc tccaaccatt
     2821 tttattatca tttccgccat aaattggatc agctaaaact ccagctactg tcatatctct
     2881 taaaagtgtg aaaaaataag aagatttaaa acctgtagtt tgaatttttc ctttttcaaa
     2941 atcgcttaaa attttatcct gatctccacc tttaagcaaa gaaaaagatt ttttataacg
     3001 cttttgagca ttttcttcaa gagcatgcac gccttctaaa aaaatatctt tgcgttgcat
     3061 aggagtttga tagccttgtt cggctttgcc ctccatgaaa ggcccttgca tatattctct
     3121 atcattataa ccataagcac tagctagctg attatcgata aaataaggca cgcctaaacc
     3181 tatagctcct tctccttgct catctttagg ataaattctt tcacaggctg cacttaaggt
     3241 atcaaattca gtttgagttt gaaaaaacat tctacctcta attttatttg attttccttg
     3301 tgaagcttga tgcgaatgcg taagttctgc tgcctttaaa acagcaccgc cacctatagt
     3361 gctagctgct actacagaac cacctagaag ccctagttta aaaaagcttc tgcgatcaat
     3421 aatattgtct tgcattactt ctccttgata ataatttaaa caagattata ttagtcctat
     3481 taatataaat ttaactttaa aaagcgataa attttgtgtt attcttaatt ttatttaaga
     3541 atatctttga aagcaatgaa aatagaactt ttaataaagc tctatatctt tagaattaag
     3601 ttctttataa gctgcacaag cttcttgatg tttttgatca caagccatac caaaatatct
     3661 tttcgccttt gttaaatctt gtttttctag ttgattatag cgtcctaaca aataacaaga
     3721 ctcaccaaaa cctaaagtgc aagatttaga ataaaaagca agagcagatt ttacacttgc
     3781 tttaacaagc tctcctttat catataaaga ccctaattga taacaagctc ttgcattttt
     3841 taaatcacaa gatcttttat aaaaacttga ggccatttgt ccatcttttt ctttttcata
     3901 aaataaagct atattattac aacttaacga ttctcctaaa gtacaagctt tattaaaagc
     3961 caaaagagct tcatttttat aaccttgatt ttgcaaaagc aaagccatat tagaacacgc
     4021 acttgctaaa cctaatttgc aagctttatc ataaaattta taagcttgat ttaaatcctt
     4081 actcataccc ttagcacttt cgtacataaa agctaaagaa aaacaagctt tagaaatatc
     4141 tttttcacaa aggcttttaa aaatttcata agctttatca aatttatttg cttcataaag
     4201 ttttaaacct tcttctaatt cacttaatgc aagtaatgaa ttaaaaaata aaaataaagc
     4261 taaaaatatt
//
LOCUS       DARATF010000118         4253 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.118, whole genome shotgun sequence.
ACCESSION   DARATF010000118 DARATF010000000
VERSION     DARATF010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4253
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.118"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            200..967
                     /locus_tag="SB502_001634"
     CDS             200..967
                     /locus_tag="SB502_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HEG0435036.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNAKALEFVKKIKENLKKEQIQICALENFI"
     gene            977..1717
                     /gene="pxpB"
                     /locus_tag="SB502_001635"
     CDS             977..1717
                     /gene="pxpB"
                     /locus_tag="SB502_001635"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEG0435037.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSAYASLLIYFNPCVLSLNSLLDFLEKIKKDIKLAEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            1698..2663
                     /locus_tag="SB502_001636"
     CDS             1698..2663
                     /locus_tag="SB502_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEG0435038.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGIELCLKGGKYEFLDENYFVLSGAEFEAKLDNQKIKTCKVYQANKGDILE
                     LDLAKIGFRGYLCVAGGFEVKSFLNSKSSDAKMGAGVFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSPKEPIIRVILGTNEDAFTQKGIETFLNTTYKVGLKSDRMAIYAE
                     SSESIEHKNSADIISDPAVFGSIQVPKSGIPIILMAGRQSTGGYTKIATVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMDQKINLDFENLI"
     gene            complement(2660..3553)
                     /locus_tag="SB502_001637"
     CDS             complement(2660..3553)
                     /locus_tag="SB502_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0435039.1"
                     /translation="MKESYLFILLFIAMFLWGSSWPTSKILANYTDTSIITFWRFFFV
                     VLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTTM
                     IPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFNI
                     LFLTCSFIWALMAVFNHKAKGAHPLAINFYINLISILMFSWILFDVKSYEIFHFEFKF
                     WISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNALT
                     LLGCALAIGAIYFINIYGKKA"
     gene            complement(3571..4143)
                     /locus_tag="SB502_001638"
     CDS             complement(3571..4143)
                     /locus_tag="SB502_001638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435040.1"
                     /translation="MLGSIIIFIAIPLLSSLLFYIKFKNQAYNKKEFLANAIEFFLTS
                     FTYIYGFFSIYQFLSTNIIALFYFFLIYHLLIYLFYKFIYEKQYLKVIPISFIPAFIF
                     LLVLLNPYIIRISKIGNYNQSFALYNKTEVKELLNSKHIPIFKENNATLFVKDLYIVS
                     NLGEKYLIKNDQNETFTLNKQDIFSLLDKI"
BASE COUNT         1638 a          545 c          704 g         1366 t
ORIGIN      
        1 ttttaaactt cttaataaac ctttatttgt aattgatgca aaaacaagaa aagactaaaa
       61 attaagcagg ttttaacctg cttaaaatat cattttttac ttattgtaac ttttttattt
      121 atttttcaaa acttttagct tatttaaaat tcttctttag atataataaa atcaataatt
      181 aaatatacaa ggtcaaataa tgttcaaagt ggatttaaat agtgatttag gggaaagttt
      241 tggcgcctat aaaatgggaa tggatgaaga aattttaaaa tttgtaagtt cagtaaatgt
      301 cgcttgtggc tttcatgcgg gtgatccttg tgtgatggat gaaaccttaa atttagccaa
      361 gcaaaatggt gtttgcatag gagcacatcc atcttatcct gatcttttgg gttttggaag
      421 acgcaatatg caaataagct ttgaagaggc taaaaactat gccttgtatc aactaggagc
      481 tttatttggc tttgctaagg caaaaggtat gaaaatacag cattttaaag cccatggggc
      541 gctttataat atggcagcta ttgatgaaaa tttagcctta gcactttgtg aggcagtggc
      601 gagttttgat gaaaatatta tttttctagg gcttagtaat tctgctatga atgaagcagc
      661 taagaaaaag ggtttaagat atgctaatga agtttttgca gatcgtgcct ataatgatga
      721 tggcacttta gtttcaagaa aattagaagg ggcgttaata cacgatgaaa atttagctat
      781 caaacgcgtg ataaaaatga taaaagaaag caaagttaca agcataaatg gcaaagaaat
      841 tgatttaaaa gccgatagta tttgtgttca tggggataat gcaaaagctt tagaatttgt
      901 taaaaaaatc aaagaaaatt taaaaaaaga gcaaattcaa atttgtgctt tggaaaattt
      961 tatataagtt ttagcaatgt ttagtgtgca ttttagtgga agtaaagctt tgcttttgcg
     1021 ttttgagcaa gaaatttcac ctcaaatcaa tgcctatgtt ttaagcacag aacaaaggat
     1081 acaaaaagcc ctaaaagaag gtgaaattta tgggattgat gagttggtaa gtgcttatgc
     1141 aagcttgctt atatatttta atccttgcgt gctttcttta aattccttgc ttgatttttt
     1201 ggaaaaaatt aaaaaggata ttaaacttgc agaacaaaac tcaagtcttt gtatagaagt
     1261 tccactttgt tatgatgaag aatttggact ggatttagaa tttgtgtgca aacacaatca
     1321 aatttcaaaa gaagagctta tatctcttca cactaaacct tattatcttg tttttatgct
     1381 aggttttatg gcaggttttc cttatcttgg aggtttagat gaaagacttt ttaccccacg
     1441 cctttcaagc cctagagcaa aaatagaagc tggaagtgta ggtatagccg ataaacaaac
     1501 aggagtttat cccatatcaa gtccaggggg ttggcaaatc attgctagaa cacctttgga
     1561 attttttgat aaagaagatg aaaaaaatcc cactctttta aaagcgggta tgtttttaaa
     1621 atttaaagcc atttcaaaag atgaattttt cgatatccaa gagcaagttg ctaaaaaagt
     1681 ctatcaaaag gaaatttatg agtataaaaa tcattgaagc atctataaat tcaagtttgc
     1741 aagactttgg tagaaaaaaa tttgctaaat ttggcatagc aagaagtgga gctatggatg
     1801 aagatgcttt aagaatggca aatatcttgc ttggaaacaa acaagatgaa gcaggaattg
     1861 agctttgttt aaagggtgga aaatacgaat ttttagatga gaattatttt gttttaagtg
     1921 gagctgaatt tgaggcaaag cttgataatc aaaaaatcaa aacttgcaaa gtatatcaag
     1981 caaataaagg cgatatttta gaacttgatt tagcaaaaat aggttttcgt gggtatttat
     2041 gcgtagcggg tggctttgaa gtaaaaagtt ttttaaactc taaatccagt gatgctaaaa
     2101 tgggagctgg agtttttgaa ggaagagctt tgcaaaaaga tgatatttta aatactcata
     2161 atacttttat accttttaat ttagaagcta gagaatgtga aaatcctctt tttaaaagcc
     2221 ctaaagaacc tattatacgc gttattttag gaacaaatga agatgctttt acccaaaaag
     2281 gcatagaaac ctttttaaat actacttata aagtaggttt aaaaagcgat agaatggcaa
     2341 tttatgcaga atctagtgaa agtatagagc ataaaaactc agcagatatc atctcagatc
     2401 ctgcggtttt tggaagtata caagtgccaa aaagtggtat tcctatcatt ttaatggcag
     2461 gaagacaaag cacaggaggc tatacaaaaa tagccacggt tatagaaaat gatctaagct
     2521 tactcgcaca agctaagtta ggttctagct ttaaatttca aagcattagc atgcaagaag
     2581 ccttagaact ttataaacaa agagaaatga aatttaaagc tatggatcaa aaaatcaatc
     2641 ttgattttga aaatttaatc taagcttttt taccataaat attgataaaa tatatagcac
     2701 ctatagccaa ggcacaacct aacaaggtaa gtgcatttgg cacctcgtct agtataaaat
     2761 aactgcaaat taaagcacta gcaggagtga ttaaaacaaa agaatttgcc ttaacgcttc
     2821 ctaaaatgtg aatcccataa taataaatac tagttcctat aatagttgat aaaaaagcca
     2881 cgacaaacat actgatccaa aatttaaatt caaaatgaaa aatttcataa ctttttacat
     2941 caaacaatat ccaagaaaac attaaaatag aaatgagatt aatataaaag ttaatcgcca
     3001 aagggtgagc tcctttggct ttatgattaa acactgccat caaagcccaa ataaaagaac
     3061 aagttaaaaa taaaatatta aatttaccaa ataaatcttc taaactccct aaatttagca
     3121 aacaaaatcc agataataaa cctaaaaata agcctagaat ttcactcttt gtgatcttgt
     3181 gagttgattt tttgtttttt tgaaaaaata tcgctatcat aaatatcaaa taagaaaaaa
     3241 taggaatcat agtggttact aaaactcctc ctttgcctgc caagccgtgc tttatagcga
     3301 taaaaaatac aaaggcataa agcccattta aaactcctgc tatcaatacc cattttaagg
     3361 cagttttttc gattttaaga ggaattttta agaagtttaa aacaaaaaat gaacccaata
     3421 caacaaagaa aaaacgccaa aaggtaataa tagaagtatc cgtataattt gctaaaatct
     3481 tagatgttgg ccaagatgag ccccataaaa acattgcgat aaaaagcaag atgaacaaat
     3541 aactctcttt cattttttcc ttaactttta ttaaatttta tctaaaagac tgaaaatatc
     3601 ttgtttattt agggtaaaag tttcattttg atcgttttta atcaaatact tttctccaag
     3661 atttgaaact atgtataaat cttttacaaa taaagttgca ttgttttctt taaaaatggg
     3721 aatatgcttg gaatttaata attctttaac ttcggtttta ttataaagtg cgaaactttg
     3781 gttgtaattg cctattttac ttattctaat aatataagga tttaaaagca caagtaaaaa
     3841 aataaaagct ggtataaaag atatgggtat aacttttaaa tactgctttt catagataaa
     3901 tttataaaat aaataaatca ataaatgata aattaaaaaa aagtaaaata aagctatgat
     3961 atttgtactt aaaaattgat agattgaaaa aaatccataa atatatgtaa atgaagttag
     4021 gaaaaattct atagcattag ctaaaaattc ttttttattg taagcttggt ttttaaattt
     4081 tatataaaaa agtaaggatg aaagtagagg tattgcaata aaaattataa tgcttcctaa
     4141 catagcatta aggaatttgt aaaatagaaa tattaataaa atattggcta aggctattgg
     4201 agttaagaaa taaaaaccta ttgttttaaa tttagcatgg gtatttttta aaa
//
LOCUS       DARATF010000119         4138 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.119, whole genome shotgun sequence.
ACCESSION   DARATF010000119 DARATF010000000
VERSION     DARATF010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.119"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..756
                     /locus_tag="SB502_001639"
     CDS             <1..756
                     /locus_tag="SB502_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0435041.1"
                     /translation="QEFIKQNIVKNLAFNVENLDLEQVQDLSKNLSNLSRRLNESLKE
                     LEPYTQNAKLNQAELKNLEHKLNLSIKDLVQIKPKTEQDIAESLHHDVKSTLLQISNL
                     AKNEGNEAVYNQANRLLAQIEINQLMSLANDSINTYLPFSWDDLNDSKIMFRRGKKDK
                     FFAQIKLEFAKLGDLEILISLNNEKYIDINIMAENIEFRKTIYENAHELKRNINKAGL
                     LSANFFVGDIIRSKFDTRNMKNLDLEMGMDKKV"
     gene            753..1034
                     /locus_tag="SB502_001640"
     CDS             753..1034
                     /locus_tag="SB502_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HEG0435042.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(1031..1831)
                     /locus_tag="SB502_001641"
     CDS             complement(1031..1831)
                     /locus_tag="SB502_001641"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEG0435043.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKYFNIDMSEFKS
                     PCEYESLNALFTRTLQIPRKLEEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYSI
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGVLYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDASIQTNAKISHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGLLTFNLKVGQGIKFGEKIAD"
     gene            complement(1828..2952)
                     /locus_tag="SB502_001642"
     CDS             complement(1828..2952)
                     /locus_tag="SB502_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEG0435044.1"
                     /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFSFIFI
                     VLFLAQAVFLIFRRDEYLSDTWYEILAMFYAPTYCLFFMTLAWDFVKLILALMGKRDK
                     TYNLILRLIFELSLIVLSVFLIYVSINNALKTPEVKSVDVEIPNLKKDLKIVMLTDIH
                     LGKNLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYA
                     LGNHEYYHGINEVLDLLRKHTNMKILVNQNLDLGFINIAGLGDLAGLDRGLYAPDLAR
                     IKVDLNTSKASILLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVHG
                     LYDLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            3039..>4138
                     /locus_tag="SB502_001643"
     CDS             3039..>4138
                     /locus_tag="SB502_001643"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEG0435045.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCSEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLVILGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAPLAKFYT
                     QEASTIKELKEKMQAIFNAKNFGEFETECKIL"
BASE COUNT         1602 a          658 c          551 g         1327 t
ORIGIN      
        1 caggaattta taaaacaaaa tattgtaaaa aatttagcat ttaatgtaga aaatttagat
       61 ctagaacaag tgcaagattt aagtaaaaat ttaagcaatc tttctcgtag acttaatgaa
      121 agcttaaaag aacttgaacc ctatactcaa aatgccaagc ttaatcaagc agaacttaaa
      181 aatctcgaac acaaactcaa tctttctatc aaagatctag tgcaaattaa accaaaaaca
      241 gaacaagata tagctgaatc tttacatcat gatgtaaaat caacactttt gcaaatttca
      301 aatttggcta aaaatgaagg caatgaagct gtatacaatc aagctaatcg tcttttagcg
      361 caaattgaaa tcaatcagct tatgtcttta gctaatgatt ctatcaatac ttatctgcct
      421 ttttcttggg atgatttaaa tgattctaaa attatgttta gacgcggaaa aaaggacaaa
      481 ttttttgctc agattaaact cgaatttgca aaacttgggg atttagaaat tcttatttct
      541 ttaaataatg aaaaatatat agatattaat attatggcag aaaatattga atttagaaaa
      601 accatctatg aaaatgccca tgagcttaaa agaaatatca ataaagcagg acttttaagt
      661 gcaaatttct ttgtaggtga tatcataaga agtaaatttg atactagaaa tatgaaaaat
      721 ttagatcttg aaatgggtat ggataaaaaa gtatgagcaa aatcaaaaga tcgattaaaa
      781 aagctgtagc tctaggctat caaaaagaaa aaaactctgc accaaaagtg cttgcaagtg
      841 gcaaaggcga aagtgctgct aaaattattt ctttagccaa ggaacacgga gttcctatta
      901 aagaagatga agatttaata gaaattttaa gcaagcttga cttaggtgat gaaattccac
      961 ctaatatgta taaagctgta gctgaagttt ttgcctttat ctatcaaatg gcaaataaaa
     1021 ctcctaaaaa ctaatccgct attttttctc caaatttaat accctgccct acttttaaat
     1081 taaaagttaa aagtcctttt tgagagatta aaactatagt agaacctagc tcaaaatttc
     1141 ctagttcttc gccttttttg aaatttaaat tttcatattt tctagtaaaa ttatgagaaa
     1201 ttttagcatt ggtttgtatg cttgcatcaa aattaaaacg catttttcct acattttgcg
     1261 ctcctacaaa aacaagccaa aaaatacctt tttcattttg acatttcaag ctcactcttt
     1321 cattttttac atataaatta ctaatgcgtt ctaaatgttt ttcatttacg ctataaagca
     1381 ctccacttgt gtaagttgca cttaaaattt gcatatcaca agggctgtga taacgatgat
     1441 aatcttttgg agaaagataa atattgacat aatcaagccc atttttaagc tcatcttttt
     1501 caaagctatc ttttaaaagc tcctcaatgc tataagtatg tccttttata gaaaaagcaa
     1561 aatgttcttc atttgccaaa aaagtacttc cacactctaa aattttacca tcacttggac
     1621 tgataaaacc ttcttcaagc tttcttggaa tttgcaaagt tcttgtaaaa agagcattta
     1681 aactctcgta ttcacaaggg cttttaaatt cactcatatc gatattaaaa tacttaacat
     1741 aattttcatt aataactttt tgtatcattt taggaaattt aatccccgct acaaaaccaa
     1801 aaagtctcga actttctttt gaaaaactca tttttttcct tttaaattta aaatcactat
     1861 ttcactcgga gcaaaaactc taagacttgg cccccaaaat cctgctccac tactcacata
     1921 aagcttagtt ttttctccta aatcataaag cccatgaaca aaaccttgct gaagtttaac
     1981 taaaaacata aaagggaaaa tttgccctcc atgtgtatgc ccacttaaaa caagatcaaa
     2041 atcacttaaa tcataaagca aagctgtttt aggttgatgt gtgagtaaaa tactagcttt
     2101 acttgtattt aaatccactt ttattcttgc taaatcagga gcatataaac ccctatcaag
     2161 tccggctaaa tctccaagtc cagcaatatt tataaaaccc aaatctaaat tttgattgac
     2221 taaaattttc atattagtat gttttctaag caaatccaaa acttcattga taccatgata
     2281 atactcatga tttcccaaag cataaaaagt tccgtaagtg gagttaaaat cattaagttt
     2341 tgagatgtaa ttttttaaat ctttaggatt agtatcaatc agatccccta ctattacaac
     2401 catatcagga ctttgcaaat tcactttagt gatgagcttg tctaaaaaat tttcatgcaa
     2461 atttttaccc aaatgtatat cagtaagcat gacaattttt aaatcttttt taagatttgg
     2521 tatttcaaca tcaacactct ttacttcagg tgtttttaga gcattattta tacttacata
     2581 aattaaaaac acacttaaaa ctataagaga aagttcaaaa atcaaacgca aaataagatt
     2641 atatgtttta tctcttttac ccataagagc taaaatcaat ttaacaaaat cccatgctaa
     2701 agtcataaaa aacaaacaat aagtcggcgc ataaaacatg gctaaaattt cataccaagt
     2761 atcacttaaa tattcatctc tacgaaatat taaaaacaca gcttgagcta aaaaaagcac
     2821 aataaaaata aaggaaaaaa ttttataaaa atacttaaaa agagtaattt tcttgattaa
     2881 tcttttataa atataaacat ttgctaagcc aaaaattaat aacacaatga aagaaaaaat
     2941 taaaaatatc atacaaagta ttataaccaa gtaaaattaa atatccgtat aaatttttct
     3001 gttataataa gcttttaaat aattttaaag gctataagat gtaccgtttt gcaccttctc
     3061 ccacaggtga tatgcacata ggaaatttac gcgcagcaat ttttaattat atctgtgcaa
     3121 gacaaaaaaa tatggatttt atcttacgta ttgaagatac tgataaggct agaaatatag
     3181 caggaaaaga agaagaaatc aaagaaattt taaatctttt tagtatttca tggcagcatt
     3241 actatataca aagtgaaaat ttaaaattcc atcgccaaat ggctttaaaa cttgtaagcg
     3301 aaaaaaaagc ttttgcttgt ttttgcagcg aagaagaact tgaagcaaaa aaagagctgg
     3361 ctaaaaaaca aggtaaagct tatcgctacg atggcacttg tgaaaaacta gccgatattg
     3421 atgttttaga atgtgaaaaa ccctttgtta tccgtcttaa aaaacctact catactatga
     3481 aatttactga ttttatcaaa ggcgagctta gttttgagcc tgaaaacata gactcttttg
     3541 tgattatgag aacggataaa actccaactt ataattttgc ttgtgcggtt gatgatatgc
     3601 ttgaaaatgt cacttgtatt atacgcggag aagatcatgt ttcaaacact ccaaaacaag
     3661 aacatatccg cgcaagctta ggttataata aagccatgac ttatgcacac ttgcctatca
     3721 ttttaaacga agaaggtgtt aaaatgagta aaagagaagc acattcttct gtaaaatggc
     3781 tacttgaaag tggaatttta cctagcgcaa tcgcaaatta tcttgtcata ctaggcaata
     3841 aaactccttg tgaaattttt accttagaag aggctataaa atggtttgat atttctaaag
     3901 tttcaaaagc tcccgcaaga tttgatctta aaaaactttt gcaaattaat cgcgaacata
     3961 tcaaaatgat aaaagatgat gagcttaata aaattttaga tttaaacaaa gatcttgcac
     4021 cacttgctaa attttacact caagaagcaa gtactataaa agaacttaaa gaaaaaatgc
     4081 aagctatttt taacgcaaaa aattttggcg agtttgaaac agaatgtaaa attttaaa
//
LOCUS       DARATF010000120         4090 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.120, whole genome shotgun sequence.
ACCESSION   DARATF010000120 DARATF010000000
VERSION     DARATF010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.120"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            39..815
                     /gene="surE"
                     /locus_tag="SB502_001644"
     CDS             39..815
                     /gene="surE"
                     /locus_tag="SB502_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEG0435046.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKANDE"
     gene            805..1464
                     /locus_tag="SB502_001645"
     CDS             805..1464
                     /locus_tag="SB502_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEG0435047.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLDKK
                     S"
     gene            1448..1906
                     /locus_tag="SB502_001646"
     CDS             1448..1906
                     /locus_tag="SB502_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0435048.1"
                     /translation="MIRKADIKDLNACLSLFEQSVKTLCAKDYTKDQICAWIKIDRQQ
                     WEEKFKYDEIFVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTY
                     LHNEIYTFASLSAKDFFLKNGFELIRENKVIKEGQNLKKFLMKKDVVYKN"
     gene            complement(1969..2349)
                     /locus_tag="SB502_001647"
     CDS             complement(1969..2349)
                     /locus_tag="SB502_001647"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEG0435049.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTVTKITNYEKHGAIF"
     gene            complement(2346..3194)
                     /locus_tag="SB502_001648"
     CDS             complement(2346..3194)
                     /locus_tag="SB502_001648"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEG0435050.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3205..4029)
                     /gene="panB"
                     /locus_tag="SB502_001649"
     CDS             complement(3205..4029)
                     /gene="panB"
                     /locus_tag="SB502_001649"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEG0435051.1"
                     /translation="MRKSILSFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
BASE COUNT         1382 a          666 c          656 g         1386 t
ORIGIN      
        1 tgttaaaatc cagattttta tcttttgcaa ggaagacaat gaaagaaatt cttatcacta
       61 atgacgatgg ttatgaaagc gaaggactta aaaaactcat taagatgtta acaaaagaat
      121 ttaaagccaa gatcaccata gtagctcctg ctagtgaaaa atcagcttgt tcgcactcta
      181 taaccctaac caaacctttg cgttttgtta aagtgggaaa aagattttac aaacttgatg
      241 atggcactcc agcagattgt gtttatcttg ctttgcatgc tttatacaaa aagcgtttgc
      301 ctgatcttgt aataagtggg attaataaag gtgctaatgt aggcgaggat attacctact
      361 caggaacttg cgcaggagct atggaggcgg ttttacaagg aattcctgct atcgctcttt
      421 ctcaatttta taaaaaaagc gaaaaagaac tagactataa aaatgcttta caaattacca
      481 aaaaaatcat tcaaaatatt tttgataaag gttttccttt ggaaaaaaaa gaatttttaa
      541 atatcaattt tcctgcaaaa tcaaaaatca aaggcattaa aatttgtaaa gcaggcaaaa
      601 gggtttataa ttttgaagcc cattcaaatg tcaatccacg aggagtggag tactattggc
      661 ttgcagcggc gaatttagac tttgaagatg agaaaaatag cgatattgcc ttgcttaaaa
      721 aaggctacgc tacaataaca cctataatgc tggatcttac agcttatgaa agaatgaaaa
      781 aagttaaaaa atggttaaag gcaaatgatg aatgatagat ttacacgtat aaaatggcta
      841 gttggagaag aaaaatttca aaaaatttca caaacaaaag ttttggtttg cggacttggt
      901 ggagtgggtg gaatttgcgt tgatgcgctt tatcgtagtg gttttaaaaa ccttacttta
      961 atcgatgcgg ataaatttga aattaccaat caaaatcgcc aaattcatag cgaaaatata
     1021 ggcgaagaaa aggctaaagt atttgaaaga atttataagg ttaaaggtat agtcagtaaa
     1081 atcgatgaaa attttttaaa aaattttgat ttaagcgagt ttgatcttat catagatgcc
     1141 attgatgata ttcctgcaaa agtagctttg gctcatctta tagattttaa aaaacaaatt
     1201 tttatctcct caacaggtgg agctagaaag cttgatccaa cacgcattaa aactacaagt
     1261 atttttaaaa ctcacggcga tgctttagcg aaaaaatttc gttatgagct tagaaaatca
     1321 ggctttaagg gaaattttga tgtggtgttt tctgatgaag aagctcattg taaagacctt
     1381 ggttcattta tgggtgtaac agcttctttt ggacttgctt tagcttcttt ggctttaagg
     1441 aaagtacttg ataagaaaag ctgatattaa agatttaaat gcttgtttgt cgctttttga
     1501 gcaaagcgta aaaacacttt gtgctaagga ttatacaaaa gatcaaattt gtgcttggat
     1561 taaaattgat agacaacaat gggaagaaaa atttaaatat gatgagatct ttgtctatga
     1621 aaaaagagga aaaatcgcaa gttttataag tgttaaacaa gagcagaaat tgcttgattt
     1681 gctttttact catcctgatt ttgttagaca aggtttagca caaaatttac ttgattttat
     1741 tttaaaaact tatttgcata atgaaattta cactttcgca tccttaagtg ctaaagattt
     1801 tttcttaaaa aatggttttg aacttataag ggaaaacaag gttatcaaag agggacaaaa
     1861 tttaaaaaaa tttttaatga aaaaagatgt ggtttataaa aactagaagt taagataagc
     1921 aaaaataatg gattaaaaga tagaaaaaat tacaaaaata gctagatgtt agaaaatagc
     1981 tccgtgtttt tcataatttg ttatttttgt aacagtgtta ttttcatcca caaaaacaac
     2041 ttttggttta aatgtttttg cttcttcttc attaaaatca gcataagaca tgatgatcac
     2101 cttatctccc acttctgcaa gacgagccgc agcaccattt aagcatacaa ctccttcttc
     2161 ttgcgtggct atggtatagg tttcaaatct agcgccatta ttgacattga ctacttggac
     2221 tttttcgtat tctaaaattc cactcgcttg caataatttt tcatctatac ttatacttcc
     2281 tatataatca agcctagctt ctgttacgct tgcgcgatgt atttttgatt tgagtaaagt
     2341 gatattcatt ttaatccttg tactaaaaaa ttatcaatga gtcttgtttt tccaacaaaa
     2401 gcagccaccg ctcctaaaac attatcagtg atattttcga tattttccat ggtgttaaaa
     2461 tcgactaatt ctatataatc gattttgatt agtttttctt tttctaaaat atctttcata
     2521 gcttggatga tcttagaagt atttttttct ccctctcgga ctaatttttc agccaaaaaa
     2581 atgctttgag atatagctag tgacgctttt ctttcttctt tgctaagata tacatttcta
     2641 gagcttttag ctaagccatc ttcttctcta atgataggac aaatttgaat ttttaaatca
     2701 aaatttaaat catcaaccat atgcctaacg actacgcatt gctgcgcgtc tttttgcccc
     2761 atatagacta tatcagggtt taggatatta aaaaatttag ttaaaaccgt gcaaacgcct
     2821 ctaaaatgcc ccggtctttt agccccgcaa agtttatcag tgatcgtatt catatctaca
     2881 taggtgctaa aattcttaag atacatttga gttgcatcgg ggataaaaac catatcaacg
     2941 ccattatctt gacacatttt aatgtcgcgt tctaaatctc ttggataact agaaaaatct
     3001 tcattaggcc caaattgcat aggatttaca aagatactta ctataacctt atcttgtgtt
     3061 ttggcatgtt tgactaaact taaatgtcca tcgtgtaaaa aacccatggt tggaacatag
     3121 cctatactaa gttgatgtga tttccaatct tttacaattt gttttgcttc tttgacagaa
     3181 gtaatgactt gcatatttgt atccttagta taatttatct aataattcat catctaaata
     3241 atcaaagctg tgctcttggg aaggaaaaat accgctttta acttcatctc tatatttttc
     3301 aactcctact tgaggatcaa ttttatcaaa atgctttaca aattttgctt taaaatcttt
     3361 atttaaaccc aaaagatcgt gataaactaa aacttgtcca tcgcagtatt tgcctgaacc
     3421 tatgccgatt gttggaattt ctaaaataga gcttattttt tgtgctagtt ttacaggcac
     3481 acattctaaa accaacatac aagcacccgc atcttgcaca gcttttgcat catctataat
     3541 tttttgggcc gattgtaaat ctttaccttg aaccctatag ccacctagca tatttacagc
     3601 ttgtggggtt agtcctaggt gagcaacgac gggtattcct gattgggaaa tcaatttaat
     3661 cttacttgcg atttctatac ccccttccac ttttacccca tttgcgtggc tttctttgat
     3721 aaatcttgag gcatttaaga tagcgtcacg atctgaactt tgataagaca taaaaggcat
     3781 atcagcaagt acgaaagact ttttagctcc gcgagaaaca gctttggtaa aaatcaacat
     3841 ttcatccata gtaacactta aagtatcttg catgccaagc actgtcatag ctaatgaatc
     3901 tccaaccaat ataatatcta tatcgctatt gtctaaaatt cttgcactat gataatcata
     3961 cgcacttacc atggttattt tttcattttt ggcctttttt tccaaaaaac taagaatact
     4021 ttttctcatt taaaatacct cgtttagcta taaaatagta agcaaaaaac tagcatataa
     4081 attttcataa
//
LOCUS       DARATF010000121         3888 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.121, whole genome shotgun sequence.
ACCESSION   DARATF010000121 DARATF010000000
VERSION     DARATF010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.121"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            280..845
                     /locus_tag="SB502_001650"
                     /pseudo
     CDS             280..845
                     /locus_tag="SB502_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851848.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
     gene            758..1213
                     /locus_tag="SB502_001651"
     CDS             758..1213
                     /locus_tag="SB502_001651"
                     /inference="COORDINATES: protein motif:HMM:NF021926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
                     /protein_id="HEG0435052.1"
                     /translation="MNAVEVLCNYFNCTFEELKNKMQEYTFALKIGEDYLISPMKINP
                     NKTLFSYCDIESAQELSLLKKTNFIEAIKKDYEKFSLNKPKPLGAIFNDCILRRLHNK
                     EHLNQIHFNNFPIVGFSSFGEIYGAGIAKSLVAIFFMKLKILMISNLDI"
     gene            complement(1414..1767)
                     /gene="rplT"
                     /locus_tag="SB502_001652"
     CDS             complement(1414..1767)
                     /gene="rplT"
                     /locus_tag="SB502_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEG0435053.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            complement(1861..2052)
                     /gene="rpmI"
                     /locus_tag="SB502_001653"
     CDS             complement(1861..2052)
                     /gene="rpmI"
                     /locus_tag="SB502_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEG0435054.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            2211..3377
                     /locus_tag="SB502_001654"
     CDS             2211..3377
                     /locus_tag="SB502_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435055.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQKGNENSLEQ
                     LSYIFNNITYASEFGFRINEEGFFDKDLNKIANIPESYDINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLGQIS
                     RIYNNQEEIDLALSNITNLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYVNGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILNSYMSVMV"
     gene            3514..>3888
                     /locus_tag="SB502_001655"
     CDS             3514..>3888
                     /locus_tag="SB502_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEG0435056.1"
                     /translation="MIYNEKIISMNNDLLDHQHKELFEISKKLSLMNQCHVGTKELKI
                     VLRELLIMINRHFSDEEAFMRKIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTE
                     KLNLVVQDFIFKHTAKEDSKIVK"
BASE COUNT         1550 a          542 c          486 g         1310 t
ORIGIN      
        1 gctcaacaaa aaaaagaaga agtaaaaaag ttttagaagc tccatatctt caataaaatg
       61 aacttgaaga aaaattaaaa aaataaacat caagccaaaa ttaattatag gctttgtgtc
      121 aatcaactta atctagcgat cataggaaat aagattcaaa attctataaa tgagcaatgt
      181 gatatcatct taagcagtgc tactgattta ttatgcaacc ttgattctaa ctcaaacatt
      241 gaaaacagtc cttataaaca aaatatccaa ggaataagct tgatactttt tagtgaagat
      301 atgatagaaa atctttgcac aaataaaatc aagcttttta gtgatataaa agattataca
      361 gaaagaaaaa aactgataga aaaagaagtt ttatttataa atataccttt tgaagcacac
      421 tgcataaata ctttgcatta tttaatttat gatggtttaa gtcaaagcga aagttctctt
      481 ttagaacttt tgtacaaaca caacccctat ccttgtgctt tagtaggggg tgggtctagc
      541 ggaaacatgg actttagcgg agcatttata ttttataacg gagaaatatt aaaaatcaag
      601 ctttaagcat acatgttcaa tttaaaccta aataccgttt taatttaatg aagtctcaaa
      661 atttcaatcc tcaaagcaac attaccttta ccatacttga tgtaagctta tatgataaaa
      721 ccgtacgcga atttattaat aaaaaacctt tcaatccatc aacgcggttg aagttttatg
      781 taattatttt aactgtactt ttgaagaact taaaaataaa atgcaagaat atacttttgc
      841 tttaaaaatt ggagaagact atcttatttc ccctatgaaa atcaacccaa ataaaacatt
      901 atttagttat tgtgatatag aaagcgctca ggaattaagc ttgcttaaaa aaacaaattt
      961 tattgaagct ataaaaaaag attatgaaaa attttctctt aataaaccaa aaccactagg
     1021 agcaattttt aatgattgta tcttaagaag acttcacaac aaagaacatt taaatcaaat
     1081 ccattttaat aattttccca tagttggttt ttctagtttt ggagaaattt atggagcggg
     1141 aattgcaaaa agtttagtgg caatattttt tatgaagttg aaaattttaa tgatttcaaa
     1201 cctagatatt taaaaacttt catacaaaaa tacagtgatt ttaaatacta ttatcttaat
     1261 ataaaaggtc aaaaactaga aatgacaaat gagattaata aaataatctt aaatcaactc
     1321 aaatgttatg aagatgttct agctaaatta aattaatact aaaaaattaa gaatttcaag
     1381 aatcaaaaat cttgaaattc ttacactaaa aaattaaagt gctttttttg cagcctctgc
     1441 aatttttgca aaagcagcag catcattcat agctaaatct gccagaattt ttctatcaag
     1501 ttcaatacct gcttttttaa gaccattgat aaatcttgaa taacttaaat cattgagtct
     1561 gcaagcagca ttgatacgca caatccaaag acggcggaag tctctttttt tacggcgtct
     1621 atcacgataa gcatagacta gacttctttc tagttgttct tttgcttttc taaaatgttt
     1681 gcgtcgtcca ctataaaaac cacgcgctaa ttttaaaact tttttatgtc tgcggcgtct
     1741 aacaacacct gtttttactc ttgccatttt tatttccttt cataaagtgg cgtccaaatt
     1801 tggagcttgc ccttgaaatt ttatctcaga ggggagtttg aatgactttt agtcaaaaac
     1861 ttaaattcct agcatttttt caacagcttt tacatttgtg ctatgcacat atttagctgt
     1921 gcgaagatca cgcattcttt ttgcaggttt tttagtcaaa atatgacttc taaaagctga
     1981 gcctcttttg attttatttt tacctacttt gaagcgttta actgcgcttt taacgctttt
     2041 catctttggc atacgctttc cttatttaga taaattttta tttttcaaac tttaaaagaa
     2101 aagataaata ctatcaaatt ttttctaatt tttgactgaa tttaattttt aaaaaacttg
     2161 gcacgcattt tgcttataaa aaaatcagca atattttgga aagatttaaa atgactataa
     2221 attcggcaaa tccatatcaa aatttaacct tatctaatcc tttgcagaat agctctgctc
     2281 taaatttgat taaagatagc aaagccttag atcaaaaagg aaatgaaaat agcttagaac
     2341 aattaagtta tatttttaat aatatcactt atgctagtga atttggattt agaatcaatg
     2401 aagaaggttt ttttgataaa gatttaaata aaattgcaaa tataccagaa tcttatgata
     2461 tcaacattaa aagcgttaga agcatagcga aagaactcgc aaaacaagat gaaaatttaa
     2521 actacaataa aattgatcta ccttatcttt taaatagcta tcatagttca ttaaaatcta
     2581 taaattcaga atttttacaa gatgataatg cttatttaag tcgcgatctt atttcaaaac
     2641 tatcatcagg tttttcaaca gataatggag aatttttagg ccaaatttca agaatttaca
     2701 acaatcaaga agaaattgat ttggcattaa gtaatatcac aaatttaaat actttaatgt
     2761 tagataataa aataactaat tttcactttg ataaagccat agaaaacact tcttctaatg
     2821 aaattttaaa accttattta actaaaaatg cagaagtatc aaaatctggt cttttaatga
     2881 attttatcta ccatgatata aaaactcaaa acgaaaaaga atttaacttt tttatgaaac
     2941 ctgccacttt agaactaagc tctcatcaaa atttacaaaa aattctcaag ggcgaaacag
     3001 atatagaaga ttacatcaaa aaagaaaatg aaaaaaagat gagttttgat ctttatcttt
     3061 atgtgaatgg cgtagataaa aaaacaagta ctcaagataa actatctgta ttttttcaac
     3121 aatatattaa ctaccaaaaa gatatggatt taagagaatt tgcaaattca agttcaatat
     3181 ttcaaattta tatcgatcaa aatcgcaatg attttgatgc tcttaaaaaa caatatcaaa
     3241 accaaagtca agatacgcaa agattagaag aagcaaatca actacgttct agctctatag
     3301 aaaatttttt agatcgtcgt caaaaacaag caaatataaa taaaatttta aactcttata
     3361 tgtctgtgat ggtttaaaat aattttttaa aaaatatata aattataaat actttaataa
     3421 taataatttt tatataatta attaataaaa ttttaagtat tatagcatta taatccgctc
     3481 tcgaaaaata taaatataaa agtactcaaa accatgattt ataatgaaaa aattatttca
     3541 atgaataatg atcttttaga tcatcaacat aaagaacttt ttgaaatttc taaaaaactc
     3601 tctttaatga accaatgtca tgttggaaca aaagaattaa aaattgtctt aagagagttg
     3661 ttgataatga tcaatagaca tttttcagat gaagaagcct ttatgagaaa aatagaatat
     3721 ccttatatca accatcatac aagaattcat agaaaaatta tcttagaaat tgaagaaatt
     3781 atcatcagtg aagctaaatt tgtaaatata atgaccgaaa aattaaatct cgttgttcaa
     3841 gattttatct ttaaacatac agccaaagaa gattcaaaga tagtaaag
//
LOCUS       DARATF010000122         3862 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.122, whole genome shotgun sequence.
ACCESSION   DARATF010000122 DARATF010000000
VERSION     DARATF010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.122"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            53..2185
                     /locus_tag="SB502_001656"
     CDS             53..2185
                     /locus_tag="SB502_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEG0435057.1"
                     /translation="MHPNKKAFKLSLFALLLITNLNAQESNKAINLQKVVVSTTGFEQ
                     DADSNLRNVISIEGKDLQNKGYVSLEQALERISGISFVNFGLGRNIDMRGQGNKSNIA
                     VKVMIDGHAINVLDNSHGVTPLDSINLDNVERIEIIPGGGSVLYGSGTRGGVINIITK
                     KQKSDAFAINLKSSTYNHGGLGGNLGINGAKQINENLAFSFDIQSFNLDGYQKGYNEK
                     GYFINTKTYIDINDNSDLTLGYNYFKSKNTSSGYLTKAQAQSDPTQKGNSDNITQINR
                     PEISLDYHYYFDDIWEFNLEAFWQNQKINYLKDEISMMGTTAYQNGSGFEDTLTGISL
                     KNKLNYANNSYFIFGYEFTNHDAKRKSLVYYSVPGVINYHRMTTLMDMTKQSHSIFAL
                     DSHNFNEFFTLSGGARYEFSTYNTNRSYRNEMSMNGRPPSSNPIITDSTTLFDTDKNT
                     NNFAFEITPNFKYSDTGNLYLKYERGFVSPTPAQFVNRNKTGNGIPPYYSSNLKAEIF
                     DTFELGIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVE
                     LSLSQNFLDDDLIFRESLTYLDAKISKGVNDGVRIPYVSKIKATAGLEYAWNKNFSNF
                     IDLTYFSRAKDGGTIDENTGKMSKNSWIRDYFLTDIGMKYNYKKLQILAGIRNLFDKR
                     YYTYQDSINDQYLVGNGRNYYVEFKYAF"
     gene            2160..3146
                     /locus_tag="SB502_001657"
     CDS             2160..3146
                     /locus_tag="SB502_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEG0435058.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFTALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNAFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHAIRLLLKNYNNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            3146..>3862
                     /locus_tag="SB502_001658"
     CDS             3146..>3862
                     /locus_tag="SB502_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0435059.1"
                     /translation="MLKIHDLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGVISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYA
                     NLKHAFSSYSKEDILEIKKFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCEKLVKEKNIAVVAILHDLNLASMFCDKILFLKEGEIK
                     YFGTSKELFTQEILKEIYDLN"
BASE COUNT         1337 a          569 c          625 g         1331 t
ORIGIN      
        1 taaattatta tgatataaat tatcattatt tattttattt aaggagtaaa atttgcaccc
       61 aaataaaaaa gcttttaaat tatctttatt tgcattattg ctaataacta atttaaatgc
      121 acaagaatca aataaagcta tcaatctaca aaaagttgtt gttagtacaa caggttttga
      181 acaagatgcg gattcaaatt tacgcaatgt aatcagcata gaaggcaaag atctacaaaa
      241 taaaggttat gtttctttag aacaagcctt agaaagaatt tcgggcatta gttttgtaaa
      301 ttttggactt ggacgcaata tagatatgcg tggacaagga aataaatcca atatagctgt
      361 aaaagttatg attgatgggc atgctattaa tgttcttgat aattcccatg gtgtaacccc
      421 actagatagt atcaatttag ataatgtaga acgcatagaa atcatacctg ggggtggatc
      481 tgtgctttat ggaagtggta ctagaggtgg cgtgattaat atcattacaa aaaaacaaaa
      541 atcagatgct tttgctataa atttaaaaag cagtacctat aatcatggtg gactaggtgg
      601 aaatttaggt atcaatggcg ccaaacaaat aaatgaaaat ttagctttta gctttgatat
      661 acaaagtttt aaccttgatg gatatcaaaa aggttataat gaaaaaggct attttatcaa
      721 cacaaaaacc tatattgata tcaatgataa tagcgactta actttgggtt ataattattt
      781 taaaagcaaa aataccagca gtggctatct aacaaaagca caagctcaaa gcgatccaac
      841 ccaaaaaggc aatagtgaca atatcacaca aatcaatcgc cctgaaattt ctttggatta
      901 tcattactat tttgatgata tatgggaatt taacctagaa gctttttggc aaaatcaaaa
      961 gatcaattat ctaaaagatg aaatttctat gatgggaact acagcttatc aaaatggaag
     1021 tggttttgaa gacacactta cagggataag tttaaaaaac aagctaaatt atgcaaataa
     1081 ttcttatttt atttttggtt atgaatttac aaaccatgat gcaaaaagaa agagtttggt
     1141 gtattatagc gttccaggtg tcataaatta tcacaggatg acaactttaa tggatatgac
     1201 taaacaaagc cattctattt tcgctcttga ttctcataat tttaatgaat ttttcacttt
     1261 atccggtgga gctagatatg aatttagcac ttataatacc aatagatctt atagaaatga
     1321 aatgagtatg aacggaagac cgccatcatc aaatcctata atcacagact caacaaccct
     1381 ttttgatacc gataaaaaca ccaataattt tgcttttgaa atcaccccta actttaaata
     1441 ctctgacaca ggcaatcttt atcttaaata cgaaagaggt tttgtttctc ctacacctgc
     1501 tcaatttgtc aatcgcaaca aaactggtaa tggaatacca ccctattatt cgtcgaacct
     1561 aaaagctgag atctttgata cctttgaact aggtattgat gatttttggt gggattttta
     1621 cggctttaat ctaactttat tttacaccct aagcaaagat gaaatttctt atcttggaaa
     1681 ccctcattct actagtggat cttggtggaa atattataat atagatcaaa ctcgccgttt
     1741 aggagtagaa ttaagcctga gtcaaaattt tttagatgat gatttaatct ttagagaaag
     1801 tctaacttat cttgatgcta aaatttctaa aggtgttaat gacggcgtga gaattcctta
     1861 tgtttcaaaa atcaaagcca cagctgggct tgaatacgct tggaataaaa atttctcaaa
     1921 ttttattgat ttaacctatt tttctagagc aaaagatggt ggcactatag atgaaaatac
     1981 aggaaaaatg tctaaaaatt cttggataag ggattatttt ttaacagata ttggcatgaa
     2041 atataattat aaaaaattac aaattttagc aggaattcgc aatcttttcg ataaaagata
     2101 ctacacctat caagacagta taaatgatca atacctagtt ggaaatggca gaaactacta
     2161 tgttgaattt aaatacgcat tctaaaattt tagtgattat agggcttttg gtagcttata
     2221 taatcgcttc ttttacagca ctttgcttag gagatgagaa tttaaaccca aaagagcttt
     2281 tttcatatat ctttagccaa gatgaaattt taagacaaat aatcatagat ggacgcttac
     2341 cacggattat aatggcgatt ttaatcggta tgcttttagc tagtagtggg gctatcactc
     2401 aaaatgcatt ttcaaatcct atagctgatc cttatatcat aggtatagct tctgcggcaa
     2461 cctttggagc ggttttggcg tatttgttaa aattgaatga ttattattat ggaattttag
     2521 gttttgtttg ctctgccttt tttgccctag gagtttttaa aatttcttct aaagcttcta
     2581 tagcaacttt actcattatc ggcatagcag cttcatcttt tttaggggct ttcacttctt
     2641 ttttcactta tcttataggc gaggattctt ttaaaatagt cgcttggctt atgggaaata
     2701 taggcaatgc ttcttggttt cgtgtgggaa ttttaatctt gcctttaatt ttttgtttgt
     2761 tttattttta cgctcataaa aacgaattaa acatactttt aagcggagat gatgaagcta
     2821 gaaatctagg ggtaaatgct caaaaattaa agataaattt actcattgtc tcatccttgg
     2881 ctgtatcttt tgcggttgct tttagcggac ttataggctt tgttggactc atcattcctc
     2941 atgctataag acttttgctt aaaaattata ataatgcctt agttatccct ttatgtacag
     3001 catttggagg attattttta cttatttgtg atactttagc aagaactctt ttagctcctg
     3061 tgcaaattcc gattggaatt ctaactgcat tttttggagc tcctattttt ttatacttgg
     3121 ctttaagcgc taggagattt ttataatgct aaaaatacat gatttaagct ttgcttatca
     3181 ccaaaaagat ttactaaaaa atattcattt agaacttaaa aaccaagctt ttataggaat
     3241 tttagggcca aatggctcag gcaaaagcac tcttttaaaa cttatactta aaaatttaag
     3301 tccaaataaa ggagtgataa gtctttttaa cacaaatatc aaggattttt ctcttaaaga
     3361 atttgccaaa atttgcggat ttgtgcctca aaaatcagaa ttaaacaccc ctttaaaagt
     3421 catcgatgtg cttttaatga gcaaatatgc gaatttaaaa cacgctttta gttcttattc
     3481 taaagaagat attttagaaa ttaaaaaatt tgctaaagat ttaagacttg aaaattttct
     3541 agaaagaagc atactttctt taagcggagg tgaatttcaa agaatgcttt tagcaagagc
     3601 tttacttaaa aagccaaaaa ttcttttttt agatgaaccc acttcagccc ttgatttaaa
     3661 ctatgctata gagcttttaa gcctttgcga aaaactagtt aaagaaaaaa atatagccgt
     3721 tgttgctatc ttgcatgatt taaatttagc ttctatgttc tgcgataaaa tccttttttt
     3781 aaaagaaggg gagataaagt attttggaac gagtaaagag ctttttactc aagaaatttt
     3841 aaaagaaatt tatgatttaa ac
//
LOCUS       DARATF010000123         3776 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.123, whole genome shotgun sequence.
ACCESSION   DARATF010000123 DARATF010000000
VERSION     DARATF010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.123"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..523)
                     /locus_tag="SB502_001659"
     CDS             complement(<1..523)
                     /locus_tag="SB502_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HEG0435060.1"
                     /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLVGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEEQIYIK
                     LQDKNFTLNHVFSK"
     gene            complement(523..2331)
                     /gene="typA"
                     /locus_tag="SB502_001660"
     CDS             complement(523..2331)
                     /gene="typA"
                     /locus_tag="SB502_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEG0435061.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            2466..2789
                     /locus_tag="SB502_001661"
     CDS             2466..2789
                     /locus_tag="SB502_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435062.1"
                     /translation="MSKPLNEEIFIEFKSDLAERKNEVLLQVLELLETFRSDENEKMA
                     RISSELTEILENEENLEKILNAKNLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMV
                     DKFLK"
     gene            2805..>3776
                     /locus_tag="SB502_001662"
     CDS             2805..>3776
                     /locus_tag="SB502_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0435063.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSTTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSINETNEFLPDHMKISQKEVVNEAMSRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSMQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDAKNT
                     LKNIKNDEFAKNLTEELNIKDQKNQDNLNKESKDLNKDFNKELNKNQE"
BASE COUNT         1305 a          642 c          552 g         1277 t
ORIGIN      
        1 ctttagaaaa aacatgattt aaagtgaaat ttttatcttg aagtttgata taaatttgct
       61 cttcattttc aaagctagga tttttgtttg cacttaaaat ttcgagcaaa attccgcaaa
      121 aaaagcgttt attttcgtcc aaaaactgaa tatcataaat tttaaaatcc ttaaattcaa
      181 agcagttttg acttttaaat tctttcaaat cctttgtaag tcctaatttt aaaaagtctt
      241 tttggcttaa actttgcttt ttaaattttg ccccaaaacg acgtaaaaat aaatttaaag
      301 cattaatttg taattctttt tgtgcgagtt ttagtttttt ggctgtaaaa cgaaagaaaa
      361 aaacacctac aaaaacagct aaaattactg cgattaaggc atctcttata aaaacaaagg
      421 ctaaaaaacc tacaagtaag gcttcgataa tgcttaggaa ttttaagatt cctaagcgtt
      481 taagtatata aagtctatta ttttctaagc tttttaaatc cattaagatt ttgctttttc
      541 cattcttttt ctttgagttg ggtcaagata gcgtttgcga acacgcacat ttacaggtgt
      601 aacttctaca agttcatctt cttctatcca ctctaaagct ctttcaagac ttaattttct
      661 aggtggcaca agtttgattg catcatcgct tccacttgct cttacattgg taagattctt
      721 tcctttgata ggattaacat ctaaatcatt tggacgagag tgctcaccta taatcatacc
      781 ggtataaact ttagtttgag gctctatgaa aagtactcca cgctcttgaa ggttaaacaa
      841 agaataccct aaagccacgc cattttccat agaaattaac gctccattat tacgcttttc
      901 aaccgcaccg ctaaaaggac ggaattctaa aaagctatga ttcatcacgc cttcgccttt
      961 ggtatcagtt aaaaactgac ttctaaaacc tataagtccg cgtgctggaa tttcaaactc
     1021 aagccttgtt tgtccatcgc ccgttggtgc catggttttc atttcagctt ttcttttgcc
     1081 aagtttttct attaccgcac cgctaaattc ttcaggcaca tcgataacta aatgttcaaa
     1141 aggttctgtt ttaactccat cttcaacctt tacgataact tcaggtcttc ccatacaaaa
     1201 ctcaaaacct tcacgacgca tattttcagc taaaatagtg atttgaagtt cgcccctacc
     1261 gcttacttta aatttgcctt cgcctgtgct ttcgtatttc atagcgatat tagttttcat
     1321 ttcagcttct aagcgttcag cgattttatt tgaagttaca tgttttcctt cagttcctgc
     1381 taatgggcca tcatttacag aaaatactat acttaaagtc ggctcttcaa tgtgcaaagg
     1441 atcaagtggc ataggattgt ttggatctac aacgctatca cccacatcta aagcttcaaa
     1501 acctgctata gctacgatat ctccacttcc tgcttcttca atatccattt tttctaagcc
     1561 cataaagcca atgagttttg aaattctacc atttactttg gtgccatcag cttttgcaag
     1621 cattacgctt tggtttttct tcacaacccc attgaaaatt ctagcaatgc ctattttacc
     1681 tacaaaatta tcatacccta aagtgaaaac ttgaagttgt aaaggattgt catttgtgcc
     1741 acttggtgct ggaacgcgtt caagtatggt tttaaaaagt ggctccatat tatcactttc
     1801 atcgtttaga tcaagcttag cataaccatt ttttgctgca gcataaacta tggcaaagtc
     1861 aagttgctca tcgtttgcat ctagggctac aaaaagatca aaaatttcat tgatcactct
     1921 ttcaggatca gcagctggtt tgtcgatttt gttgattaca actataggtt taagccctaa
     1981 agataaagct tttttaacca cgaatttagt ttgtggcata acgccttctt gagcatccac
     2041 caaaagcaaa actccatcaa tcatttttaa aacgcgttct acttctccgc caaaatcagc
     2101 atgccctgga gtatctatga tgttgatttt tgtacctttg taattgatcg ctgtgttttt
     2161 tgaaagtatg gtaatgccac gttctttttc tatatcgttg ctatccataa cgcgttctga
     2221 aatttgttct ctttcgctaa aggtgcctga ttgttttaat aattcatcta ccatagtggt
     2281 tttaccatgg tcaacgtgag ctataactgc tatatttcta atgttttcca aattttcttc
     2341 tccaaagcta aatttttaaa agcttagatt atacaaaaat ttaacttaaa ctacaaagca
     2401 tcaaaacttg gaacacttct tgctttaaag acttgtgaaa ttaaaatttt aaaaaggaag
     2461 ttaaaatgtc aaaaccatta aatgaagaga tttttattga atttaaaagc gatttagctg
     2521 agagaaaaaa tgaagttttg cttcaagttt tagagctttt agaaactttt agatcagatg
     2581 aaaacgaaaa aatggcaaga atttcaagtg agcttacaga aattttagaa aatgaagaaa
     2641 atttagagaa aattttaaat gctaaaaatt tagaagagct tttaaatatc ttaactgctt
     2701 taaatgaaga taagatgatt aaagtatatg aagattctta tttgaaagaa aaatttccta
     2761 atgtaatggt agataaattt ttaaaataat tttttgaagg aaaagtgatg tcaaatttag
     2821 ctccgcaaaa tgatgtttta aatcttacgc cgagtaaaac ttctactact agcagttctt
     2881 ttagtaaaac tagtaaaaat aaagaacatg aaagtagtga tagtaaaaat tcaactcaag
     2941 atgatacgga aagtttttta aattctttgc ttaattctat caatgaaacc aatgaatttt
     3001 tacctgatca tatgaagatc agtcaaaaag aagttgttaa tgaagcgatg agcagacttc
     3061 aaaaaggagc ttttgatgag agcgataaga taagcatttt cgaatctgct tcttttatgc
     3121 aaattctttc tttgttagat aagctaaaaa cagatacagc agatgttaaa ctagcaaatc
     3181 tttctactca actttcaagt cttattaaaa cagaggctaa ttttaatgct ttaaaaggtg
     3241 catcaaatct tagtgagctt ttggacatag ctaaagatct gggcttaaat gtaaaaaata
     3301 ttaaagtaga tcgtcttctt gatcttaaag caacttttcc aaatttagat aaggctgatt
     3361 tttttaaggg tgctgtggat aatgttttta aagaaatcat caataataaa atttccaatg
     3421 tgagtaaaaa tttaaatcac aatttagaaa atacaactca tactacaagc actcattcta
     3481 tgcaaaaaac aaattctaaa gatagcggtt ctttgctttc tcaaacttta aaaaatttag
     3541 attccatact ttcatccaaa gaaagcaaac acgaaaaaaa cgataaagtt aaatcaaaaa
     3601 tagaagaaga taccacagat gctaaaaata ctttaaaaaa tatcaaaaat gatgagtttg
     3661 caaaaaattt aacagaagag ttaaatataa aagatcaaaa aaaccaagat aatttaaata
     3721 aagaaagcaa agacttaaac aaagatttta ataaagagtt aaataaaaat caagaa
//
LOCUS       DARATF010000124         3729 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.124, whole genome shotgun sequence.
ACCESSION   DARATF010000124 DARATF010000000
VERSION     DARATF010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3729
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.124"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..632)
                     /locus_tag="SB502_001663"
     CDS             complement(<1..632)
                     /locus_tag="SB502_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435064.1"
                     /translation="MKYRYIKWDENEKCAIFFPDIDFDIWKKTQLLENDYANPTLIIS
                     SHLKDKVGILELFEYYILLICGKSMGVSRWECNNLILLDTYSIDNISSPFYLNTPKPT
                     YISEYINVLGQLFLAGYIDFGSYCDEDRNKIDYPSNLSYYKEDKYQAWIYFRDNFFYQ
                     DKFIRDLDDPETLDEGGYSLILNDVSWDTPQYWSQYNIWIATTPKGTKYF"
     gene            complement(622..2217)
                     /locus_tag="SB502_001664"
     CDS             complement(622..2217)
                     /locus_tag="SB502_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435065.1"
                     /translation="MLNYSILENSLNIKLECLSKQSLEYKDLISNTLKEQKTTQVDKK
                     QAIAKLHALLENQNLECIHGGKVILKSNKGKTFKDDGVPIMLESDLLNSSIVACPNTI
                     AGVSVPCTKVVNVKGSLSQKKVNNEYVILQELISACKTDKGFALKVSFTPTKFKFDHS
                     FDPKEGLGEQSKNQIELKEPIIRLHYKSDRFQKDNLPIYNLLINNEKKEQDKALNEFN
                     IDLKDLKDIEDVNIFNQFKQDFSKDYEFKELNLSFDTNLIKLYFIIPKNIAKVYKSAY
                     KEFENKDLGAGYFTQLHEYDKIIKNALEDNKELNEYHFSFLAPAKMQNLKLQIAQGLD
                     EILEDEDRKQELYVCKFVVVNGVSENNTQEIIPDNVIRIQTQDGSGEFIEIVFPSQLE
                     LNDKPLEDVSYTFVPALRGIKQFFKDTEYLKPRTLTKDEVLQIVDKLPKNVRDKRRRI
                     VENKEELDKLWKKLTKNSEEFENKVDKKYGQPIYMRKLDDQTIIQYKKTSKSGGETIE
                     INSNKPRGNLKTIHIENGIKNEI"
     gene            complement(2677..3072)
                     /locus_tag="SB502_001665"
                     /pseudo
     CDS             complement(2677..3072)
                     /locus_tag="SB502_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002883939.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3135..3638)
                     /locus_tag="SB502_001666"
     CDS             complement(3135..3638)
                     /locus_tag="SB502_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435066.1"
                     /translation="MGDSITLSIFWGLILFIASFTVARIYLIALSVLIVFSIINYWMR
                     INIKEFVKSYFLISFIIFFMAIVIVFYLTYDLETSRGLVLLGPPEIEKLSPQEYKAHN
                     YFGFLSGITIIFFIITFFILPCLLQAYLFKCYSTGEKCKKLSWFIGFVCNVPILISSV
                     YVIYENL"
BASE COUNT         1248 a          541 c          444 g         1496 t
ORIGIN      
        1 tggaagtatt ttgtgccttt tggggttgtt gctatccaga tattgtattg tgaccaatat
       61 tgtggtgtat cccaagaaac atcatttaaa ataagactat atccaccctc gtctaatgtt
      121 tcaggatcgt ccaaatctct aataaatttg tcttgataaa agaaattatc tctaaaatat
      181 atccaagctt gatatttatc ttctttataa taagataagt ttgagggata atctatttta
      241 tttctatctt catcacaata agatccaaaa tctatataac ctgctagaaa aagttgcccc
      301 aagacattaa tatattcact tatataggta ggtttgggtg tatttaaata aaatggactg
      361 ctaatattat cgatgctgta agtatctaat aaaattaaat tattacattc ccaccttgag
      421 acacccatgc tttttccaca aataagcaaa atataatatt caaatagttc taaaataccg
      481 accttatctt ttaaatgaga tgatataatt aaagttggat tagcataatc attctctaaa
      541 agctgggttt ttttccatat atcaaaatct atatcaggaa aaaaaatagc acacttttcg
      601 ttttcatccc attttatata cctatatttc attttttatc ccattttcta tatgtattgt
      661 tttaagattt cctcttggct tattggaatt tatctctatg gtctcacccc cgcttttaga
      721 agttttctta tattgtataa tagtttgatc atctagtttt ctcatataaa tcggctgtcc
      781 gtatttttta tctactttat tttcaaactc ttcagaattt ttagttaact ttttccataa
      841 tttgtctaat tcctctttat tttcaactat tctcctgcgt ttatctcgaa cattttttgg
      901 cagtttatct actatctgca acacttcatc tttagtcaat gttctgggtt ttaaatactc
      961 agtatcttta aaaaattgct ttatccctct taaagccgga acaaatgtat aactcacatc
     1021 ttccaaaggt ttatcattga gttctaattg actaggaaat actatctcaa taaactcccc
     1081 actgccatct tgtgtttgta ttcttataac attatcaggg ataatttctt gagtattgtt
     1141 ttcactaacc ccatttacca ccacaaattt acaaacataa agctcttgtt ttctatcttc
     1201 atcttctaag atttcatcta gtccttgtgc gatttgaagt tttaaatttt gcatttttgc
     1261 aggagctaaa aaactaaaat gatattcgtt taattcttta ttatcttcta aagcattttt
     1321 gatgatttta tcatactcat gtagctgtgt aaaataccct gctcctaaat ctttattttc
     1381 aaattcctta taagcacttt tataaacttt agcaatgttt tttgggataa taaaataaag
     1441 tttgattaaa ttagtatcaa agctaagatt taattcttta aattcataat ctttactaaa
     1501 gtcttgtttg aattgattaa aaatattaac atcctctata tcttttaaat cttttaaatc
     1561 tatattaaat tcatttaaag ccttatcttg ttcttttttt tcattattga ttaaaagatt
     1621 atagataggt aaattatctt tttgaaatct atcactttta taatgaagtc ttattatagg
     1681 ttcttttaac tctatttgat ttttactttg ttctcctaag ccctctttag gatcaaagct
     1741 gtgatcaaat ttaaacttag taggagtaaa gcttactttt aaagcaaagc ctttatctgt
     1801 tttacaagct gagatgagtt cttgtaagat tacatattca ttattgactt tcttttgaga
     1861 taaggatcct tttacattaa caactttagt acaaggaaca cttacacctg ctatagtatt
     1921 aggacaagct actatactag agtttaataa atcactttct agcattatag gcacaccatc
     1981 atctttaaaa gtttttcctt tgtttgattt aagtatgact ttacctccat ggatacattc
     2041 taggttttga ttttctaaaa gagcatgaag tttagctata gcttgttttt tatctacttg
     2101 tgtggttttt tgttctttta aagtgtttga aattaagtct ttatactcta agctttgttt
     2161 gcttaaacat tctaatttga tatttaaaga attttctaat atagaataat taagcaaaca
     2221 aagttcatca tttttataaa agatactaag tcttcctaaa ccactgcttt catctttagg
     2281 agaaaaataa taactaggtg tatcttgttt tatagtgtta tcttgatcta attctccaaa
     2341 gtaaaaagga ttattaggaa gttcatttga gcctgtaagg agggtggagt ttaggaagat
     2401 ttttatatct aaacttttaa aatctatttg atatttttct tctatgtcct ttatatccaa
     2461 aacacttcta tcttttgcaa aaatatcaca atgattatca taaatatgga tcaaatttga
     2521 catagagatg aaagaagtat tgttagaatt atcttgcaaa tcttgtaaat ttactttatc
     2581 taagaatatg atttttatat tatttgtctt taatactatg gtattggtat ttttatcata
     2641 aaattgctct atgttaaata cttcgtttaa aattaaatta acatcatttt ccttagtatt
     2701 aaagctttga ttatttagat tatcttgtaa ggaaatttct ttatttaaat agtcttggat
     2761 atcttttatt ttttcatttc ttttttcttt taaagtattg atagatttat aaagcctttt
     2821 tctagcatca agataggtat cattgagctt ttctttatct aggatgaaga tctttgtgaa
     2881 agtagaatta tagcctagat tgtttatagc ggtagcttgg gtgaaaagct cttcttgatt
     2941 ataatttata gctatggaat tttcacattg atataaggct tttaagtatg ctatggatga
     3001 atttttatct attgtgtcta tttcatcatt gtttataaaa gcaagccttg ttataaataa
     3061 ttctctatcc atttttttct aaatatttaa gataaatgaa tattatatca aatatattaa
     3121 atttttgata gtctttaaag attttcatat atcacataaa cacttgagat caatatagga
     3181 acattacaca caaaccctat aaaccaactt aattttttgc atttttctcc tgtgctataa
     3241 catttaaata aataagcttg caataaacaa ggaagtataa aaaatgtgat tataaaaaaa
     3301 ataatagtta taccacttaa aaatccaaaa taattatgtg ctttatattc ttgtggtgat
     3361 aatttttcaa tttctggagg accaagtaat acaagccctc tagaagtttc aagatcataa
     3421 gtaagataaa atacgataac aatagccata aaaaagataa taaaagatat taaaaaataa
     3481 gattttacaa attcttttat gttaattctc atccaataat ttataataga aaagacaata
     3541 agaacgctta gagctataag ataaattctt gcaacagtaa aactagcaat aaacaaaatc
     3601 aaaccccaaa aaatagaaag tgtaatgcta tctcccattt aaactcctgt attataaagc
     3661 acattataag ctttatcttt aaaatcaagt ttagcaataa aatctttact ataaagttta
     3721 aagtccaaa
//
LOCUS       DARATF010000125         3713 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.125, whole genome shotgun sequence.
ACCESSION   DARATF010000125 DARATF010000000
VERSION     DARATF010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.125"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            18..779
                     /locus_tag="SB502_001667"
     CDS             18..779
                     /locus_tag="SB502_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-461"
                     /protein_id="HEG0435067.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFLRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKS"
     gene            complement(877..1761)
                     /locus_tag="SB502_001668"
     CDS             complement(877..1761)
                     /locus_tag="SB502_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEG0435068.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(1758..2432)
                     /gene="modB"
                     /locus_tag="SB502_001669"
     CDS             complement(1758..2432)
                     /gene="modB"
                     /locus_tag="SB502_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEG0435069.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFIN
                     KKMSFQ"
     gene            complement(2425..2826)
                     /locus_tag="SB502_001670"
     CDS             complement(2425..2826)
                     /locus_tag="SB502_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HEG0435070.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKI
                     GVSVELLFKEHELCFSASKTLLSVENSFLAKITKIKKGKLLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            complement(2823..3572)
                     /gene="modA"
                     /locus_tag="SB502_001671"
     CDS             complement(2823..3572)
                     /gene="modA"
                     /locus_tag="SB502_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0435071.1"
                     /translation="MKKFIVFFGILFFTLHLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGVENLKEKANKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAVIIDAKYFSPLEQSYVITKY
                     AKDKKLAFEFNEFIGSSKAKEIFKKYGFSTP"
     gene            complement(3623..>3713)
                     /locus_tag="SB502_001672"
     CDS             complement(3623..>3713)
                     /locus_tag="SB502_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="malonyl-[acyl-carrier protein]
                     O-methyltransferase BioC"
                     /protein_id="HEG0435072.1"
                     /translation="KCFLKDFEEKFQNKLTYHPVFILCKNDIK"
BASE COUNT         1382 a          557 c          498 g         1276 t
ORIGIN      
        1 aaatagaaag atattttatg aaaaaaataa ctttattttt acttttctta aatttagtgt
       61 ttgggcaaga taagatatta aataattggt ttaaagagta taatacaagc ggcacttttg
      121 ttttttatga tggaaaaact tgggcgagta acgacttttt aagggctatg gagactttct
      181 ctcccgcttc cacttttaaa atttttaatg ctctaattgc acttgatagt ggtgtgataa
      241 aaactaaaaa agaaattttt tatcactata gaggtgaaaa agtattttta tcttcttggg
      301 cgcaagatat gaatttaagt tcagctataa aatattctaa tgttcttgct tttaaagaag
      361 tggcaagaag aattggtatc aaaactatgc aagaatattt aaacaagctt cattatggta
      421 atgctaaaat ttccaagatc gatacttttt ggcttgacaa ctcactaaaa ataagcgcta
      481 aagaacaagc aattttgctt tttagacttt cacaaaatag cttacctttt tctcaagaag
      541 caatgaatag tgttaaggaa atgatttatt taaaaaatat ggaaaattta gagctttttg
      601 gaaaaacagg ttttaatgat gagcaaaaaa ttgcttggat tgtaggtttt gtgtatttaa
      661 aagatgaaaa taaatataag gctttcgcgc taaatttaga tattgataaa tttgaagatt
      721 tatataaaag agaaaaaatt ttagaaaaat atttagatga acttgtaaaa aaaagttaaa
      781 aatgatggct agtgagtatt tcgtaaaatg caaaaatact taattgtatg atttgcgtac
      841 acttaaagta ctcattaaaa aattaaattt ttgctcttat ttatcaagtt ttcctacgat
      901 gatagggtta aaggctttta tggatagcaa aagcgtatcg ccgattttta catcttgata
      961 agcttttaga aattcctctt cactaagagt gattttaata atatcttgat ttaaaagcaa
     1021 ggttaaaacc actaaaatat cacttttttt aatttctagc aaagttgcac ttaagcgtaa
     1081 ttttgcgctg atatttgaat gagtaaaaaa ttcattttta ggaaaatctt taataatttt
     1141 tccgttttta agctctaaaa ttctatgact taacttataa atttcagcta gatcatgact
     1201 taccaataaa gtacttattt taaaatactc taaaatcttg gttaattcat cttgtaaatt
     1261 ggcacgcatt ttaaaatcca aagcactcaa aggttcatct aaaagcaaga tttttggttc
     1321 tcttgctaaa gctcttgcta aagctactct ttgtgcctgc cccccactta aatgtttagg
     1381 ataaatttta gctaaatttt caagcttcat taaggctaaa agctcgctaa cctttgcttt
     1441 agaactagcg gcataggcga tgttttcttt tatattcata tttggaaaaa gcgcataatc
     1501 ttgaaaaaca aaaccaattt ttcttttttg taaagctaaa ctaaaatttt ttgaagaatc
     1561 aaaccaaagt tcattatcta cttctatacg ccccaattta ggctttataa gtcccgctat
     1621 gatttttaaa agagtggttt ttcctgctcc actttcgcca aaaagtgcag taatttttcc
     1681 tgattctata tcttttttaa aatttaaatc cagtcttcct ttagcggtat tcataggatg
     1741 attgatatca attcttatca ttgaaaactc atttttttat tgataaaata aagactaaaa
     1801 agtactaaaa aagaaaaaat aaacaatata aaagcatatt gatgggctaa gctatagttt
     1861 aagatttcaa gttcatcata aatagctata ctagccacta aagtttcacc ttgtttatgt
     1921 cctcctatca tcatcacgac tccaaattca cccacagtat gggcaaaact catcgcacaa
     1981 gcactaaaaa ttcctgcttt agaattaggt aaaatcactc taaaaagagt ataaatttta
     2041 cttttaccta aactataaga agcatcgagc aaatttggat tgatcgatga aaaggcactt
     2101 tgcaaaggat ttaccataaa aggcaaagaa aaaatcaaag aagcaaaaac aagaccttca
     2161 aaactaaaaa ccaaagaaag attaaaatat tcttttaaaa cttgccctaa aaaactatta
     2221 gccgaaaaag ttacaagcaa ataaaatccc aaaacactag gaggtaaaat caaaggcaag
     2281 gaaataaagc tttgaaggat tgttttaaaa ggaaaacgca caaaacttaa caaataagct
     2341 aaaaaaacac cgataaaaaa aaggataaaa gtcgtgataa aagcaagttt aaaagtaaga
     2401 taaagggttt gtaaaaaagc tggatcaagc actatgactc cttaatacaa tatcatttgc
     2461 ttttacaaaa caaagccatt cttgattttc acaaatttca agttctaaag ctttttcttt
     2521 ggtgataata ctagaaagtt cattaccttt aaaatcaaaa aatacctgat ataaaagttt
     2581 gcctttttta atttttgtaa ttttagctaa aaaagaattt tcaacactta aaagagtttt
     2641 gcttgcgcta aaacaaagct catgctcttt aaaaagaagt tctacactca caccaatttt
     2701 taaattttct aaagatttta attcaagcat taaaacacta aaaatcactt ctttagaaag
     2761 tattttaaca ataactatat cctcttgatt taaaagctca caaatttgtc cttttataag
     2821 gttcatggtg tgctaaatcc gtatttttta aaaatttctt ttgcttttga agagccaata
     2881 aattcgttaa attcaaaggc taatttttta tccttagcgt attttgtgat gacataactt
     2941 tgctctaaag ggctaaaata ctttgcatca attataacag ccttaccctt aggatgattg
     3001 atagaagaaa ctaaagaata agccactata gctatatctg aatttttgct atctacatgt
     3061 aaaacaggca ctgagatatt ttcgcctaaa acgattttat ccttaagaag ctcatttaaa
     3121 cccaaatttt caagcacttc tttagctgct actccataag gagctacttt aggattggct
     3181 atgcttagat gcgtgatttt gtttgccttt tcttttaaat tttcaacgcc tccttggagt
     3241 aaattttcat ccaagctata caaagccaaa actcccaaaa cataaacttt tggttttatt
     3301 aaagcatttt tatcatcata aatagcctta gcatatttag tatccgctga aaaaaagaga
     3361 tcaaattctc ttccttgttt taaaagctca taatattttc cagaagcacc aaaaaccaat
     3421 tctattttat cttctggatg tgttttcaaa aactcatctt taacttcact catcgccttt
     3481 gaagctgaag aagctacaaa aatacttaaa ttttgcgcat ttagatgtaa ggtaaaaaac
     3541 aaaatcccaa aaaatactat aaactttttc atttagcttt ccttgtgtaa aaatttaatt
     3601 tttggattat aacacaaaaa aatcatttta tatcattttt gcataaaata aatacaggat
     3661 gataagtgag tttgttttga aatttttctt caaaatcttt taaaaaacat tta
//
LOCUS       DARATF010000126         3629 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.126, whole genome shotgun sequence.
ACCESSION   DARATF010000126 DARATF010000000
VERSION     DARATF010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3629
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.126"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1511
                     /locus_tag="SB502_001673"
     CDS             <1..1511
                     /locus_tag="SB502_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015016481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0435073.1"
                     /translation="DYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEY
                     FKKAMIGYGNDPLDALQGIEQFVHNLPKMLTHSSYKELINKRKNLSKTAIIVSTGPSL
                     IKQLPLLEKYQNKATIFCADSSYPILAKHNIKPDYVCMLERTSLTAEFFNHDFKDFDK
                     DIVFICASLIHPNAIAYLEKNNREYILISRFLSFALFIACHDYGYFDQSPSVAHMSYI
                     IAAKLCHKNIIFIGQDLAYAENGDSHPQEYQNSSTFESNIYQKIECLGYGGKNSVKTH
                     SIWLLFKQIIEQLILDYPYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIK
                     LKKPNIQKQNELMLKSYAKIYKSIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKE
                     ILDILIQIIDNFKTKLENVNMVDFYEILGPLLMQFELNLARIYVLNPKTLEDSFNKSV
                     LWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIKNANK"
     gene            1498..3396
                     /locus_tag="SB502_001674"
     CDS             1498..3396
                     /locus_tag="SB502_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0435074.1"
                     /translation="MQTSDIFKKNLDSMKGNVYKKLKEELKNFQELRDFSFTIGKDSL
                     NINLICKKNLKKIYQDPVQELNENLVFYQQNYYNHPFLFFYGLGNGILYKALLKNLNH
                     KRIVIIEKELEIIFIVLNFIDFSEYLFNGRIAIIYSSDYNNNTAELIFSLTNINLFFK
                     TYQINIHSAFYETYQEDIKKINNINLQTIKYLTLKKGTDPSDAMLGIEQAIWNLPEMF
                     KHYSYKELLQKRKGLNKNAIIVSTGPSLTKQLLLLKQYANKAIIFCVDSSYSILAKHN
                     IKPDYVLSLERIPLTSEFFNNDFGEFDKDVLFILPSLTHPNSIKYLNKFKKDYMLIAR
                     YLPFMISLNLKDNGYIGGGMSVAHVAYELAISLECKNIILIGQDLAYNKEGKSHTDDY
                     INLTLHEKDFERDKGRFTTTAYGGKGTVESSEIWTLFRKIFENYAINNKKCIKIYNCT
                     EGGARIEGTIEKPFEEICEEILESEIKKPLIKLKKKTKKEQFEHMLKSYQKIKKNIQL
                     ALSFQKECKKTLRKIQKITLKNEYINMDDIVKDIDNIRNKLSNKRYFFLHEILGPSLY
                     HEESLIAPIYIQSVNNESQRQNKILSWIYANESLIETIIDLIESQNIRIKKAIIPLQD
                     ELEKRNLI"
     gene            complement(3424..>3629)
                     /locus_tag="SB502_001675"
     CDS             complement(3424..>3629)
                     /locus_tag="SB502_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435075.1"
                     /translation="VQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNIL
                     AQSGSYAMSQANAVQQNVLKLLQ"
BASE COUNT         1458 a          501 c          500 g         1170 t
ORIGIN      
        1 aagattatga aatgttaacc cttacaaaac catttatatc ctttttaaga atttattttt
       61 tagaactttc aagtagctat tatgaaaaaa tgaataaaga tatccaaaaa gttaataaaa
      121 atttaatgga atactttaaa aaagctatga taggctatgg taatgatccg ctagatgctc
      181 ttcaaggtat agaacaattt gttcataatc ttcccaaaat gcttactcat tctagctata
      241 aggaattaat caacaaaaga aaaaatttaa gcaaaactgc tatcattgtt tcaacaggac
      301 caagtttaat caaacaacta cctttgcttg aaaaatatca aaataaagcc acgatttttt
      361 gtgcagattc ttcttatcct attttggcta aacataacat aaagcctgat tatgtctgca
      421 tgcttgaaag aacaagttta acagccgaat tttttaatca tgattttaag gattttgata
      481 aagatatagt ctttatatgc gcatctttga tacaccctaa tgctatcgct tatctagaaa
      541 aaaataatag agaatatata ctcatatcaa gatttttatc ttttgctctc tttattgctt
      601 gtcatgatta tggatatttt gatcaaagtc ctagtgtcgc acatatgagc tatataatag
      661 cggctaagct ttgtcataaa aatatcattt ttataggaca agatttagcc tatgcagaaa
      721 atggggattc gcaccctcaa gaatatcaaa actcatcaac atttgaaagt aatatatatc
      781 aaaaaataga atgtctagga tatggtggta aaaattctgt aaaaacgcat tctatttggc
      841 tactctttaa acaaattata gaacaactta ttttagatta tccatatatt aatacttata
      901 attgcacaga aggcggagca tggatagaag gaactataga acaatctttt aaaacaactt
      961 gtgataaact tctgctcgat gatttaaaca aaccctttat taagcttaaa aaaccaaata
     1021 ttcaaaaaca aaatgaactt atgctcaaat cttatgcaaa aatctacaaa agcataaaac
     1081 actgtataga atttaaaaag cagactttag ctactattga ggatatagaa tctagctata
     1141 caactttaaa ttatttaagc ttagaagaaa gtaaggaaat tttagatatc ttgattcaaa
     1201 ttattgataa ttttaaaacc aaactagaaa atgttaatat ggtcgatttt tatgaaattt
     1261 taggaccgct tttaatgcaa tttgaattga atcttgctag gatttatgtt ttaaatccaa
     1321 aaactctaga agatagtttt aataaatctg tattatggat caaagaacat ttagaattta
     1381 tacatatggt ttatggacac atagaagccc aagaaaatgc tttatttaaa aatatcatac
     1441 cattagaaga agagctgaaa aaaagagggt ttaaaaaata tttacaaagg ataaaaaatg
     1501 caaacaagtg atatttttaa aaaaaattta gattctatga aaggaaatgt atataagaag
     1561 ttaaaagaag agctaaaaaa ttttcaggag cttagagact tttcttttac cataggaaaa
     1621 gattctttaa atataaatct gatttgtaaa aaaaacctaa aaaaaattta ccaagatcca
     1681 gtacaagaac ttaatgaaaa tttagttttt tatcaacaaa attactataa tcatcctttt
     1741 ttattttttt atggattagg taacggaatt ttatataaag cactattaaa aaatctaaac
     1801 cataaaagga ttgtcattat agaaaaggaa ctagaaatta tatttatcgt tctaaatttc
     1861 attgatttta gtgagtattt gttcaatggg cgcatagcta taatatattc ttctgattat
     1921 aataacaaca ccgcagagct tattttttca ttgacaaata ttaatctttt ttttaaaaca
     1981 tatcaaatca acattcactc tgctttttat gaaacatatc aagaagatat taaaaaaatt
     2041 aataatatca atcttcaaac tataaaatat cttactctaa aaaaagggac agacccttca
     2101 gatgctatgt taggaatcga acaggctatt tggaatttac cagaaatgtt caagcattat
     2161 agctataaag aattattaca aaaaagaaag ggtttaaata aaaacgccat cattgtttct
     2221 acaggacctt cgctcactaa gcaacttctt ttactaaaac aatatgccaa caaggctatt
     2281 atattttgtg tggactcttc ttattctata cttgctaagc ataacatcaa gcccgattat
     2341 gtattatctc tagaaagaat tcctttaact tcagaatttt ttaataatga ttttggagaa
     2401 tttgacaaag acgttttgtt tattttacca agtttaactc accccaattc aatcaaatac
     2461 ttaaataaat ttaaaaaaga ttacatgcta atagctagat atctaccttt tatgatttct
     2521 ttaaacctta aagataatgg ttatatagga ggcggtatga gtgtggctca tgtagcttac
     2581 gaattagcaa tttcattaga gtgtaaaaat attattttaa tagggcaaga tttagcttat
     2641 aataaagaag ggaaatccca tacagatgac tatataaacc taactttgca cgaaaaggat
     2701 tttgaacgag ataagggtcg ctttaccact acagcttatg gtggcaaggg aacagttgaa
     2761 agttctgaaa tttggacttt atttagaaaa atatttgaaa actatgcaat caataataaa
     2821 aaatgcatta aaatctacaa ctgtactgaa ggtggggcaa gaatagaggg aaccatagaa
     2881 aaaccttttg aggaaatatg cgaagaaata cttgaaagcg aaattaaaaa acctttaata
     2941 aaactaaaaa agaagacaaa aaaagaacaa tttgaacata tgctcaaaag ctatcaaaaa
     3001 atcaaaaaaa atatacaact tgcactcagt tttcaaaaag aatgcaaaaa aactcttaga
     3061 aaaattcaaa aaatcactct taaaaacgaa tatattaata tggatgatat tgtaaaagat
     3121 atagataaca taagaaacaa actgagcaac aaaagatact tttttttaca tgaaatttta
     3181 ggacctagtc tatatcatga agaaagttta attgccccta tttatatcca aagtgttaac
     3241 aatgaaagcc aaagacaaaa taaaattcta tcttggattt atgctaacga atctttaatt
     3301 gaaactataa ttgatctcat agaaagtcaa aacataagaa ttaaaaaagc cattatccct
     3361 ttacaagatg aattagaaaa aagaaattta atctaaagag caaaaatttg ctctttagaa
     3421 aaattattgt aaaagtttta agacattttg ttgcacagcg ttagcttggc tcatagcata
     3481 tgaacccgac tgcgcaagga tattgtactt agaaaaattt gcactttctg cagcgaaatc
     3541 cacatctctt atggttgatt ctgctgcttt aacatttacc tgggttacgg taatattatt
     3601 tatcgttact tggagctgat tttgcacag
//
LOCUS       DARATF010000127         3589 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.127, whole genome shotgun sequence.
ACCESSION   DARATF010000127 DARATF010000000
VERSION     DARATF010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.127"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..783)
                     /locus_tag="SB502_001676"
     CDS             complement(<1..783)
                     /locus_tag="SB502_001676"
                     /inference="COORDINATES: protein motif:HMM:NF028199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435076.1"
                     /translation="MSEDDLQYLIKNKILRLYDYEDINFNIIDWTYNPYDHTGYIFIL
                     HKMEYVLDLAYFFIKTRDEGIKEIIFDILNSWYLSCNDKLDNPWIFHDHATALRAFNI
                     SKFLNIMKNYISEDQFLLLQKILAIDVNKLLMDEFYSKNTNHGLDQSLSLYKASFFLE
                     VDNILDIRNVAIERINSELKFAFCDDGGHKENSPAYLYYGVSQVLRALDIGYKYEKEN
                     TKIYFPLDLLKKSCLVLGYFVQFNEKMPLIGDTVEFKINNFLL"
     gene            complement(780..3530)
                     /locus_tag="SB502_001677"
     CDS             complement(780..3530)
                     /locus_tag="SB502_001677"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013672.1,HMM:NF019846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEG0435077.1"
                     /translation="MVGKLKKYISKKIFKQDLISVFKIKIKDIDYLEIINDNIYYLKY
                     NKLFVIYNYQQIDINFLENFSKNCGSSDLHYISMWKLNDKLFCSIKNNANFYDIISVF
                     DNKVIYTYNYPILEEYIKISKTKSLFLFDTYDKNKSMVLYVKNNKPMVVIEDIKIFSI
                     AYLKSYVYANIKEHQSSKIKIISKINFFGKINLISKEIATGLYYKIIEKNKKLLLCQD
                     GPTKIFDINKKVVFDDSNGDNIGSQINSYVTINSQFGRNYLIFSTWRNTKNYPRSCLY
                     FIRNETKRLIKKYDNKKYYDELKWSGYKSYRTGHISCNEKIIFCNKYDHPVIIEFSNY
                     FYKNLIDNIVSFCDDKSLIVDDKEDVNETKSNNVINYNKDLTPIRSTKYYITIDTEQH
                     VKNVPFALTGEGLEKECGIYLIMDILEKYNLKGVFFVNIYEHRNFNGIIEKIVKDIND
                     RGHEVGLHYHANVSSKWQKNFPDYSLEEQTEILKYGRDFIFNIIKKYPVSFRGGGYQI
                     NMNTFKALEYSGFKYDSSAFVSYKQDMIYKSINKVVQYGNIIEFPVSTNFLFNYPMKL
                     DLNTQGNARDMLDIMSSHRFNGLENIVIMLHSFSFIKWYKGNDDKLKSKLKFTGNRYA
                     IGVNNNLINEFELFCKSISDNEEFENALFENLTLAEIESSLANEKDFVPKDIIKYSNE
                     KSTCPICENNVSFQEYRNRKNAICPKCRSLERMRFKYLYLKRFLHINTMKNKNILHIG
                     PAMCVYNKLRSLNQINYITSDPFSDSIYNYPLENIPFADGYFDIIICVGILIHVLDDD
                     KCLREMHRLLSKNGKLILWVGDLYNDKTVERYNRADFDKMKAISFDYPDNLSDGKTIL
                     LDDGSIGYNPRYSTRTYGKDFVDKLKNMGYDADIIKSQDIAGYKKYGLREDDVLIIGS
                     RI"
BASE COUNT         1311 a          541 c          283 g         1454 t
ORIGIN      
        1 tagtaaaaaa ttatttattt taaattcaac agtatcacca ataagaggca ttttttcgtt
       61 aaattgaaca aaatatccta aaaccaaaca agattttttc aacaaatcta atggaaaata
      121 tattttagta ttttcttttt cgtatttata accaatatct aaagctctta aaacttgaga
      181 aacgccataa tataaatagg ctggactatt ttccttatga ccaccatcgt cgcaaaaagc
      241 aaatttgagc tcactgttaa ttctttctat tgcaacattt cttatatcca atatattatc
      301 aacttctaaa aaaaaagatg ctttatataa agataaactt tgatctaatc catgatttgt
      361 atttttagaa taaaactcat ccattaaaag tttattaaca tcaattgcta aaattttttg
      421 taaaagcaaa aactgatctt cacttatata atttttcata atatttaaaa atttagatat
      481 attaaaagct cttaatgctg tagcatgatc atgaaatatc caaggattgt ctaatttatc
      541 attacaagat aaataccaag aatttaaaat atcaaatata atttctttta tgccttcatc
      601 ccttgtttta ataaaaaaat aagccaaatc taatacatac tccatcttat gcaatataaa
      661 aatataacct gtatgatcat atggattata tgtccaatct ataatgttaa aatttatgtc
      721 ttcataatca tataatctta aaattttatt tttaattaaa tattgtaaat catcttcact
      781 catattctac ttcctataat taaaacatcg tcttctctta atccatattt tttatatcca
      841 gctatatctt gagattttat aatgtctgca tcataaccca tattctttaa cttatctaca
      901 aaatctttac cataagttct agtcgaatac cttggattat aacctatgct tccatcatct
      961 aacaatattg tctttccatc tgacaagtta tcaggataat caaaacttat tgctttcatc
     1021 ttatcaaaat cagctctatt atacctttca acagttttat cattatataa atctccaacc
     1081 caaagtatta attttccatt tttagataat aatctatgca tctctcttaa acatttatca
     1141 tcatctaata catgaattaa aatacctaca catataataa tatcaaaata cccatctgca
     1201 aatggaatat tttccaatgg ataattatat atagaatcag aaaatggatc agaagttata
     1261 tagttaattt gatttaacga tcttaactta ttatatacac acatagcagg acctatgtgt
     1321 aaaatatttt tatttttcat agtatttata tgtaaaaatc tttttaaata cagatattta
     1381 aatctcattc tttctaaaga tctacatttt ggacaaatag cgttttttct atttctatat
     1441 tcttgaaaag agacattatt ctcacatata ggacaagtac tcttctcatt actatatttt
     1501 atgatatctt ttggaacaaa atctttttca tttgccaagg aactttcaat ttctgctaaa
     1561 gttaaatttt caaacagtgc attttcaaac tcttcattat ctgaaatact tttacaaaat
     1621 aactcgaatt cattaattaa attattatta acacctattg catatctatt acccgtaaat
     1681 ttcaattttg attttaactt atcatcattt cctttatacc attttataaa agaaaaagaa
     1741 tgcaacatta tcactatatt ctcaaggcca ttgaatctat gtgaactcat tatgtctaac
     1801 atatctcttg catttccttg agtatttaaa tccaatttca taggataatt aaataaaaaa
     1861 tttgtagata ctggaaattc gataatatta ccatattgca ccactttatt aatagactta
     1921 taaatcatat cctgtttata agacacaaaa gcagatgaat catatttaaa accactatat
     1981 tccaatgctt taaaagtatt catattaatt tgataaccac cccctctaaa cgaaacagga
     2041 tattttttaa taatattaaa tataaaatct ctaccatatt ttaatatttc agtctgctct
     2101 tctaatgaat aatctggaaa atttttttgc cacttagatg atacattggc atgataatgt
     2161 aaaccaactt catgtcctcg atcatttata tccttaacta ttttttcaat aattccatta
     2221 aaatttctat gttcatatat atttacaaaa aaaacacctt ttaaattata tttttctaat
     2281 atatccatta ttaaataaat tccacattct ttttccaagc cttcacccgt taaagcaaat
     2341 ggtacatttt taacatgttg ctccgtatct attgttatat aatattttgt tgatctaatt
     2401 ggtgttaaat ctttattata atttataaca ttattacttt tggtttcatt tacatcttcc
     2461 ttgtcatcta caattaatga tttatcatca caaaatgaaa caatattatc aattaaattt
     2521 ttataaaaat aatttgaaaa ttcgataatt acagggtgat catacttatt gcaaaaaatt
     2581 attttctcat tgcaactaat atgtccagtt ctatagcttt tgtatccgct ccactttaat
     2641 tcatcataat atttcttatt atcatatttt tttataagtc ttttagtttc gtttctaatg
     2701 aaatataaac atgatcttgg atagtttttt gtatttctcc aagtgctaaa tattaagtag
     2761 tttctaccaa attgactatt tatagttaca tatgaattaa tttgagatcc tatattatca
     2821 ccattggaat catcaaaaac aactttttta tttatatcaa aaattttagt aggaccgtct
     2881 tggcacaaca gtaatttttt attcttttct attattttat aatataaacc agtagcaatc
     2941 tccttagaaa tcaagttaat tttaccaaaa aagttaattt ttgatattat ttttattttg
     3001 gaactttgat gttcttttat atttgcatac acatatgatt tcaaatatgc tatagaaaaa
     3061 atttttatgt cctctataac taccattggt ttattgtttt ttacatacaa caccattgat
     3121 ttatttttat cataagtatc aaatagaaat aaactctttg ttttacttat tttaatatat
     3181 tcctccaaaa ttggatagtt atatgtataa ataactttat tatcaaaaac acttataata
     3241 tcataaaaat ttgcattatt tttaatagaa caaaataact tgtcatttaa tttccacatt
     3301 gatatataat gcaaatcgct actaccacaa ttttttgaaa aattttctaa aaaatttata
     3361 tctatctgct gataattgta tataacaaat aatttattat actttaaata ataaatatta
     3421 tcatttatta tttctaaata atcaatatct tttattttta tcttaaaaac actaattaaa
     3481 tcctgtttaa atattttttt agaaatatat ttttttaatt taccaaccat tgtatctcct
     3541 tatatattta aaaaattaca taatttcata tatgcatatt tataagtat
//
LOCUS       DARATF010000128         3536 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.128, whole genome shotgun sequence.
ACCESSION   DARATF010000128 DARATF010000000
VERSION     DARATF010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3536
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.128"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            125..1906
                     /locus_tag="SB502_001678"
     CDS             125..1906
                     /locus_tag="SB502_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HEG0435078.1"
                     /translation="MKRRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDDNDGMSFFP
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDILYEQASVGVSILEIEKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDF
                     FGSLDENLEFNDSLKRYGFNKTSLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAQ
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGADTSKI
                     LDEGILYVGQFNGNVGDFKGQGKWIALEYGKNSLNEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTIMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVIMIRKLDGGVIGS"
     gene            complement(1944..2882)
                     /gene="trxB"
                     /locus_tag="SB502_001679"
     CDS             complement(1944..2882)
                     /gene="trxB"
                     /locus_tag="SB502_001679"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEG0435079.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVTGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCNMEEGGQVSVDLKMQTSIAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3016..3330)
                     /gene="trxA"
                     /locus_tag="SB502_001680"
     CDS             complement(3016..3330)
                     /gene="trxA"
                     /locus_tag="SB502_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEG0435080.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3387..>3536)
                     /locus_tag="SB502_001681"
     CDS             complement(3387..>3536)
                     /locus_tag="SB502_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435081.1"
                     /translation="SERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKNDVIQFC
                     ENISF"
BASE COUNT         1239 a          565 c          559 g         1173 t
ORIGIN      
        1 atacctagta aaaaactagg tataaatttt tccttcaatt taaatttttc atcaaagttt
       61 ctaaaaagtt tccaaatatt tttatacttc cattgtttta aattttaata tggggtaaaa
      121 acaaatgaaa agaagattgt ttttaaaagg ttcagcttta ggttctatgg tggctttttt
      181 tgcaagttca aatttaagtg ctgctatgct taaggataag gatttgctag gttttaaagc
      241 tgttagtgca agcacacaag ataaagttat agtaccacaa ggttatgaag caaaggtttt
      301 aatttcttgg ggtgatccac tttttagtaa agcaaaacct tatgatgaaa ataaaatcat
      361 cgacatgaat gcagttaaaa atgctcattt ggtttttgga gatgacaatg atggtatgag
      421 tttttttcca ctttcaaaaa acagaggaat tttagccgtt aataatgaat atataaatcc
      481 tgaaatcatg tttaatcatc atggtaaaaa tttaagcaaa gaagatattt tatatgagca
      541 agccagtgtg ggtgtgagta tcttagaaat cgaaaaaaaa ggtgatgatt ggactgtggt
      601 tttagactct aagtataacc gcagaatcga tgcaaacact aaaatgcaag taagtggagc
      661 agctaaaaaa gaagttttaa aaaatgaaaa atttgttcat ggaacttttg caaattgtgc
      721 aaatggacaa acaccttggg gaacttatat cacctgtgaa gaaaattttg atgatttttt
      781 tggaagttta gatgaaaatc tagaatttaa tgactctctt aaacgctatg gatttaacaa
      841 aactagtctt tatggatggg aaaaatttga tgaaagattt gatttagcta aaaatatcga
      901 tgaagctaat cgttttggtt ggatagtgga aatcaatcct tttgatgcac aaagcacacc
      961 tgttaaaaga acttctttag ggcgttttaa acatgaaaat gcagaaatta tcgtagaaaa
     1021 agatggttct gttatagttt atatgggtga tgatgagatg aatgaattta tttataaatt
     1081 tgttagcaaa cataaataca aaaaaggtgc tgatacaagt aaaattttag atgaaggtat
     1141 tttgtatgta ggacagttta acggcaatgt gggagatttt aaaggacagg gaaaatggat
     1201 agctttagaa tatggcaaaa acagcttaaa tgaaaaaaat ggttttaagt ctcaagctca
     1261 agtactcatc aatacgcgtc ttgctgcaag cattgtaggt gcaactccta tggatagatg
     1321 tgaatggata gcaagtcata aacaaagtgg ttctaaagag gtatttgcaa cactaacgaa
     1381 caacaaaaat cgccaagaac ctaatgcagc aaatccaagg actaaaaatg tttatggaca
     1441 aattttaaaa tggatgccaa aaaattctca taaagacgat gattttactt gggaaatttt
     1501 tgctcttgct ggaaatcctg ataaccaaca aggcttatat aaaggctcaa ataatattac
     1561 aagtgaaaat aaattcaatt ctcctgatgg acttaaattt gatagagatg gaagactttg
     1621 gatacaaaca gatggatctt attctaataa agatgagtac gaaggtatgg gaaataactg
     1681 catgctagca gcaaatccaa aaacagggga aatcagacgc tttttaacag ggcctattgc
     1741 ttgtgaatta acagggattg cttttagtga ggattatact ataatgtttg taggcataca
     1801 acatccagga gaaggtttaa aaggtagtac ttttccttat ggaaaaacac caagatcgag
     1861 tgtaataatg ataagaaaac ttgatggtgg agtgatagga agctaaataa aaataaagtt
     1921 gcttttagca actttataaa atcttaatgc aagctttcta tataagccat agcacttaat
     1981 gcagctacag ctccatcacc tgcagcacaa atcacttgct taggtgcatc ttttctaaga
     2041 tctcctgcgg caaaaagtcc agcaatacta gtttgcattt taagatcaac acttacttgc
     2101 ccaccttctt ccatattgca taaaaactta ccatcatctt gttttaaaat ttcatttctt
     2161 acattaagac caacaaaagt aaaaattcct ggaacattta aatctctaat actaccatct
     2221 tttaatttta cttttacccc agtaacaccc attttatcac catatacttc atctacactt
     2281 gcactagtaa tgagttctat tttttcattt ttcttaactt tttctactgt agatggagcc
     2341 gctctaaact catctctgcg gtggataaga taaaccttag aacaaatatt tgctagatac
     2401 aaggcttctt ctaaagccgt atctccacca cctaaaactg caacttcttt atttttataa
     2461 aaaaatccat cacaagttgc acaagtactt acaccttttc caaaaaattc atcttcgcct
     2521 ttaaaacctg ctctttttgg agccgagcct gtgcaaacta tcacagcttt agcaagttct
     2581 gttttaccac cttctaattt gatggtaaaa cttccatcac tattttttaa aatttgttct
     2641 actccaacca tttcatgttt taaaccaaaa cgcatgcatt gttcactcca aggagccata
     2701 aaagaaattc catccataac ttgggctaca cctggataat tttctatctc agaacttgag
     2761 gtaatttgtc caccaggcat acctttttca aacattacta catttttaag tccacctcta
     2821 gttgcataaa gtccggcact aagtccagca ggacctccac ctatgattgc tacatctaac
     2881 atttatattt cctttatatt gaattttatt attaataatg atataaaaat tattcttaat
     2941 agtagttaat aaaaattatt atttagtata aatttgaaat ttttaagaag aaggctagtt
     3001 atactagcct ttagtttata gtaaagagtt taatttatcg ctaattgctt gtttagattg
     3061 tgcaccaact agttgatcta caacttcacc atttttaaag aaaataagcg taggaataga
     3121 gcgaacacca aattcagctg ctaaatcacc ttgttcatct gtatttactt tgcaaatttt
     3181 agctttacca tcgaagtcat ttgcaagttc atcaataact ggagcaagca ttctacaagg
     3241 tccgcaccat ggagcccaaa aatcaactaa agctacacct tcttttgctt gagcaaaatt
     3301 atcacttgtt aattcaatat attttcccat aatttttcct ttctttaatt tttgtctaat
     3361 tgtattttat ttttttaaat atcagcttaa aaacttatat tttcgcaaaa ttgtatcaca
     3421 tcatttttaa tgcaaatcag atcaatctga aaatccgatg aaattccatt tttaagatga
     3481 taaaattcta tagtttttaa aattttttca agtttttttc tatccaaacg ctcgga
//
LOCUS       DARATF010000129         3529 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.129, whole genome shotgun sequence.
ACCESSION   DARATF010000129 DARATF010000000
VERSION     DARATF010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.129"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(9..1133)
                     /locus_tag="SB502_001682"
     CDS             complement(9..1133)
                     /locus_tag="SB502_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0435082.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFAVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKAALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(1130..2380)
                     /locus_tag="SB502_001683"
     CDS             complement(1130..2380)
                     /locus_tag="SB502_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEG0435083.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(2382..2885)
                     /gene="petA"
                     /locus_tag="SB502_001684"
     CDS             complement(2382..2885)
                     /gene="petA"
                     /locus_tag="SB502_001684"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEG0435084.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(2976..>3529)
                     /locus_tag="SB502_001685"
     CDS             complement(2976..>3529)
                     /locus_tag="SB502_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEG0435085.1"
                     /translation="FIGEIFNIKISFFALLWAGIFWLIILKIQGKKSIKILFEAPYGV
                     LLFSFGLYMVVFALHKIGVSEILVKSYAFLMQDKSGIFGVALISAFGSSVFNNLPMVL
                     IGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKGINISFW
                     QYCKFGFLITLPVLVFSLFALIV"
BASE COUNT         1292 a          722 c          449 g         1066 t
ORIGIN      
        1 ttataatact aatgtaattt agaccaaaca gaacgcttcc aacctatagc aaaaatactt
       61 aaaattacaa agaatatcat tacataaatt cctgtagttt ttctttcttc ttttttgcta
      121 tcacccactt gatcaatata agatacaacc ttagcctgtg cagcttctgt taaacctact
      181 cttggcatag cggttcctgg aagaagtttt tgagtattat taataaaatc atgtaaatat
      241 tgctcaccac gagatcttat catcatagaa agatcaggtg gaacagaacc taaataagtt
      301 tttaaatcat tttgatttga tggagtaaaa aagctatcgt atttcatatc atgacaacgt
      361 ccgcaagcct caataaaagt tgctttatct ttagcaaatt ttatatcttt ttccattaaa
      421 gctgcttttt gagcactatt ttccatttta gcatattttg cctcaacatc tttcttaata
      481 gtagcatctt cattggcttc aaatttaaca ctcacatctt taagataagc aattacattg
      541 gctatatttg catttgtagc ttcttcactt tctcctgaag tatctttatt gtaagctgtc
      601 ataataaaag catcaccaaa tttatgatct acttttaaag caagcgcagg atgcataatc
      661 aaagctgcta aaaatttttc atcaaaaata gcaccagctg cactgagatc aggcggtatt
      721 actcccatag aagaatcagt aatattagct gctattccat cttcttttac accatgacat
      781 gcaaaacagt tattttcaaa aaattcttta cctttttttg catcaccctt agcaaaatcg
      841 atctttgcaa catctgccca aagtgtttca accttgctta attcttcttt tgctttttca
      901 agttctttgt ttgcactctc tattctttta gcatctcctg aagcttgtgc atcttttaga
      961 gctaattctt tagcttcaac tatacctttt gcaaaagtag tatcttcaac agcaaaatca
     1021 aaatttgcag gagcaacatg aggcttcatc actgaatgag cataaggctc taccccccaa
     1081 tatacaagtg cagtaaaaac tactacaact aaaaatattt ttatttctct cattgtttag
     1141 ctccttttct ctccataata gtaataaccg gtaaaactac aataagtaaa agtaaaaata
     1201 ctatagaagc gtaaaatcct acccaagcat ttacacctgt tggaggtaat tttccataaa
     1261 cagttaaaac aattaaatca ataagcaata tccaaaacca aatgaaaaat aaaggtcttt
     1321 catgagctgg ttttaccaca tcacttctat caagccaagg aagcaagaag aaaatcactt
     1381 gagcaatacc aaatgcagcc aaacctatat caaaagcttt aatacctgca atatcaaaga
     1441 aaaatcctct taaaacttca taactccata agaaatacca ctcaggataa atatgagctg
     1501 gtgttttaag cgcattagct ggatcaaaat taattggatc cattgcaaat tcaaatttaa
     1561 aacagaccaa ataaaagaag aaaatcataa aaaagcttat atacataaaa tcttttgata
     1621 aaaatcctgg ccaaaaagga atcactttag aaccctttgt gtcacctgcc atgtattttt
     1681 cagcctctaa atcaaagtca agttcttcag aaatttcatt attaacatga ggaattctta
     1741 aagaatagaa gtgaaatgct ataatagcaa tgataactat aggaagcaag cacacatgaa
     1801 gcataaaaaa tcttgttaaa gttggatcag aaaccgcata atctccacga atccaaatca
     1861 caagctcagg gccaataaat ggtatccctc caaaaagatt agtgattact tgagctgccc
     1921 aataactcat ttgtccccaa ggaagcatat acccactaaa agcttcagca gaaaatacaa
     1981 caaacaaaag cataccgcta acccaaatca tctcacgacc ttttttataa gaaccgtaat
     2041 aaattcctgt tagcatatgt atgtatataa tcaaaaatac aacagaagcg gcaacaccat
     2101 gcatgtgacg ccaaagccat ccatagtcca cctcttgcat aatagtctta ttcacactat
     2161 caaaagcaag tgcagtatct ggtttataat acatcacaag taaaagtcct gtaacaaaaa
     2221 gcactgcaaa aagagtggtt aaaataaccc ccattgccca aagaaagtta atttgctttg
     2281 gtatccaata ttttaccatt aaaacatcaa gcagtttatg taccgcaagt ctttgatcaa
     2341 gccaatctac aagaccatta gcttttctaa tttgtgccat cttaagcctc cgctatcatt
     2401 tttttatatt caggaccctc ttcacctaaa acaagcttgg ttccatcaat tttaaaagga
     2461 ggaatttcaa gaggctttgg aggaggtcca aagacatttt ttccacttgt gtcaaattct
     2521 ccaccatgac aggcgcattt aaacaattgc tcacttggtt ggtaagcagg tatacaaccc
     2581 aaatgcgtac aaagtcctat aaccacagta taagctgcgt tatctaccac aacatcacgt
     2641 ttttcatctt ttggcatact cgcatctttt tttaatataa aaataggctt tttacgccat
     2701 tctatagttc taagctctcc atcttgcatt cctgataaat ctactgtagt aaaacctgca
     2761 gctttaacac ttggaagcgg atcccaagtt tttttcatcg caacaagtga gaaaacaccg
     2821 cctacagcag ctacgcttcc aaatgcaaag cccataaagc ttcgtctact ctcagatgta
     2881 gccataactt gctcctttcg attttatttt ttaaccaagt taaaagttta tcgaaattaa
     2941 aataaatttt ttctttgttt aacaagtttt gatatttaga caataagagc aaaaagagaa
     3001 aaaacaagca caggtaaagt tatcaaaaag ccaaatttac aatattgcca aaaagaaata
     3061 ttaatgcctt ttctagccaa aactccaagc caaagcaaag ttgctaaaga acctattggc
     3121 gtaagttttg gacctatatt tacacctaaa agatgtgcat aaatcatcaa agaatcaaaa
     3181 gaaaaattct caaaatattc ttttaatgcc aaatctccga ttaaaaccat aggcaaatta
     3241 ttaaacacag aagatccaaa agctgaaatc aaagccacac caaaaattcc actcttatct
     3301 tgcatcaaaa aagcatagct tttaaccaaa atttcactca cacctatttt atgtaaagca
     3361 aaaaccacca tataaagccc aaaactaaaa agcaaaactc cataaggtgc ttcaaaaaga
     3421 attttaatac tttttttacc ttgaattttt aaaataataa gccaaaaaat tcccgcccaa
     3481 agcaaagcaa aaaaacttat tttaatatta aaaatttcac ctataaaaa
//
LOCUS       DARATF010000130         3377 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.130, whole genome shotgun sequence.
ACCESSION   DARATF010000130 DARATF010000000
VERSION     DARATF010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.130"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            114..3020
                     /locus_tag="SB502_001686"
     rRNA            114..3020
                     /locus_tag="SB502_001686"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            3276..>3377
                     /gene="rrf"
                     /locus_tag="SB502_001687"
     rRNA            3276..>3377
                     /gene="rrf"
                     /locus_tag="SB502_001687"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         1043 a          623 c          885 g          826 t
ORIGIN      
        1 ttagttttat attaagtgtt tgaatgcttt ccgtcttaag ataaagaagt cttatcataa
       61 aaactttaac aaggaagtga tgcgttttag aatcaataat aaaaggtaaa aaaaggtaag
      121 ctactaagag cgaatggtgg atgccttgac tggtaaaggc gatgaaggac gtactagact
      181 gcgataagct acggggagct gtcaagaagc tttgatccgt agatttccga atggggcaac
      241 ccaatgtata gagatataca ttacctatat aggagcgaac gaggggaatt gaaacatctt
      301 agtaccctca ggaaaagaaa tcaatagaga ttgcgtcagt agcggcgagc gaaagcgcaa
      361 gagggcaaac ccagtgcttg cactgggggt tgtaggactg caatgtgcaa gagctgagtt
      421 tagcagaaca ttctggaaag tatagccata gagggtgata gtcccgtatg cgaaaaacaa
      481 agcttagcta gcagtatcct gagtagggcg ggacacgagg aatcctgtct gaatccgggt
      541 cgaccacgat ccaaccctaa atactaatac cagatcgata gtgcacaagt accgtgaggg
      601 aaaggtgaaa agaactgagg tgatcagagt gaaatagaac ctgaaaccat ttgcttacaa
      661 tcattcagag cactatgtag caatacagtg tgatggactg ccttttgcat aatgagcctg
      721 cgagttgtgg tgtctggcaa ggttaagcaa acgcgaagcc gtagcgaaag cgagtctgaa
      781 tagggcgctt agtcagatgc tgcagacccg aaacgaagtg atctatccat gagcaagttg
      841 aagctagtgt aagaactagt ggaggactga acccataggc gttgaaaagc cccgggatga
      901 cttgtggata ggggtgaaag gccaatcaaa cttcgtgata gctggttctc tccgaaatat
      961 atttaggtat agcgttgtgt cgtaatataa gggggtagag cactgaatgg gctagggcat
     1021 acaccaatgt accaaaccct atcaaactcc gaatacctta tatgtaatca cagcagtcag
     1081 gcggcgagtg ataaaatccg tcgtcaagag ggaaacaacc cagactacca gctaaggtcc
     1141 ctaaatctta cttaagtgga aaacgatgtg aagttactta aacaaccagg aggttggctt
     1201 agaagcagcc atcctttaaa gaaagcgtaa tagctcactg gtctagtgat tttgcgcgga
     1261 aaatataacg gggctaaagt aagtaccgaa gctgtagact tagtttacta agtggtagga
     1321 gagcgttcta tttgcgtcga aggtataccg gtaaggagtg ctggagcgaa tagaagtgag
     1381 catgcaggca tgagtagcga taattaatgt gagaatcatt aacgccgtaa acccaaggtt
     1441 tcctacgcga tgctcgtcat cgtagggtta gtcgggtcct aagtcgagtc cgaaaggggt
     1501 agacgatggc aaattggtta atattccaat accaacatta gtgtgcgatg gaaggacgct
     1561 tagggctaag ggggctagcg gatggaagtg ctagtctaag gtcgtaggag gttgtacagg
     1621 caaatccgta taacaatact ccgagaactg aaaggctttt tgaagtcttc ggatggatag
     1681 aagaacccct gatgccgtcg agccaagaaa agtttctaag tttagctaat gttgcccgta
     1741 ccgtaaaccg acacaggtgg gtgggatgag tattctaagg cgcgtggaag aactctcttt
     1801 aaggaactct gcaaaatagc accgtatctt cggtataagg tgtggttagc ttcgtactag
     1861 gatttactcc gaaagcgaag aaacttacaa caaagagtcc ctcccgactg tttaccaaaa
     1921 acacagcact ctgctaactc gtaagaggat gtatagggtg tgacgcctgc ccggtgctcg
     1981 aaggttaatt gatggggtta gcattagcga agctcttgat cgaagcccga gtaaacggcg
     2041 gccgtaacta taacggtcct aaggtagcga aattccttgt cggttaaata ccgacctgca
     2101 tgaatggcgt aacgagatgg gagctgtctc aaagagggat ccagtgaaat tgtagtggag
     2161 gtgaaaattc ctcctacccg cggcaagacg gaaagacccc gtggaccttt actacagctt
     2221 gacactgcta cttggataag aatgtgcagg ataggtggga ggctttgagt atatgacgcc
     2281 agttgtatat gagccattgt tgagatacca ctctttctta tttgggtagc taaccagctt
     2341 gagttatcct caagtgggac aatgtctggt gggtagtttg actggggcgg tcgcctccca
     2401 aataataacg gaggcttaca aaggttggct cagaacggtt ggaaatcgtt cgtagagtat
     2461 aaaggtataa gccagcttaa ctgcaagaca tacaagtcaa gcagagacga aagtcggtct
     2521 tagtgatccg gtggttctgt gtggaagggc catcgctcaa aggataaaag gtaccccggg
     2581 gataacaggc tgatctcccc caagagctca catcgacggg gaggtttggc acctcgatgt
     2641 cggctcatcg catcctgggg ctggagcagg tcccaagggt atggctgttc gccatttaaa
     2701 gcggtacgcg agctgggttc agaacgtcgt gagacagttc ggtccctatc tgccgtgggc
     2761 gtaagaagat tgaagagatt tgaccctagt acgagaggac cgggttgaac aaaccactgg
     2821 tgtagctgtt gttctgccaa gagcatcgca gcgtagctaa gtttggaaag gataaacgct
     2881 gaaagcatct aagcgtgaag ccaactctaa gatgaatctt ctctaagctc tctagaagac
     2941 tactagtttg ataggctggg tgtgtaatgg atgaaagtcc tttagctgac cagtactaat
     3001 agagcgtttg gcttatcttt aataaagcat cacttccttg ttaaggtttt taagaatact
     3061 ttaaatatag ataatattta gagtttaata gaaatctttc aagtagagtt tgtattagaa
     3121 cttgctctta acattgtttt ttaagtattc tatataaaaa cttatcaaag ataaaagata
     3181 agaaaagaag aaagagaata aagaaaaaag taaagaaata aaagattaag ttttattctt
     3241 aaattcaatc tttcaaagaa tatttaaata acaatgtccg tgattataca gatgtggaaa
     3301 cgccttgctc catcccgaac caagaagcta agcacatcgt gggtgatgat actacgcctt
     3361 actggcaggg ggaaagt
//
LOCUS       DARATF010000131         3146 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.131, whole genome shotgun sequence.
ACCESSION   DARATF010000131 DARATF010000000
VERSION     DARATF010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.131"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..225
                     /locus_tag="SB502_001688"
     CDS             <1..225
                     /locus_tag="SB502_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEG0435086.1"
                     /translation="FLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            209..1117
                     /locus_tag="SB502_001689"
     CDS             209..1117
                     /locus_tag="SB502_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0435087.1"
                     /translation="MMLEIKNLSKNFEKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAIARGCQLLLLDEPFSNLDQNLKQDLRRE
                     LKKMIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEEKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFYRLKLRY
                     KNIEFFMLLSSNYNLEEKINFDIINF"
     gene            1153..2358
                     /locus_tag="SB502_001690"
     CDS             1153..2358
                     /locus_tag="SB502_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HEG0435088.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     TFIKERLGVQIETAQIDADDSNAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YIDTANYEHPDLAKFEYKEQWARNDKFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKKIRFFMTFGQSYLTHMKCLENVGMLGIKPVI
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(2386..3048)
                     /gene="sodB"
                     /locus_tag="SB502_001691"
     CDS             complement(2386..3048)
                     /gene="sodB"
                     /locus_tag="SB502_001691"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HEG0435089.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQVA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
BASE COUNT         1110 a          415 c          564 g         1057 t
ORIGIN      
        1 tttttggctt ttattattgt ttttattgat acgattaaag aacttccttt aagtagaatt
       61 ttagcgcctt ttggctttga aactttaagt gttaaagctt tctggtttgc aagtgatgaa
      121 agaatttatg atgcagcttt gccttccttg tttatcgttt ttctttcttt aatggttgtt
      181 gtttggatgg ataaaatcac aaggaaagat gatgttagaa attaaaaatt tatctaaaaa
      241 ttttgaaaaa atacaagctt tagaaaatat caatcttcat gtcaaagaag gagaattttt
      301 aagcatttta ggaggtagtg gaagtggaaa aagcacgctt ttaaggatta ttgctaagct
      361 tgaacaagct agttcttatg atttgttttc ttgcaaaggt gaagtggctt tgatgtttca
      421 aaattatgct ttatttcctc atttaaatgt tgagaaaaac atactttttg cactttacga
      481 taaaaaagat aaaaatcaaa ttttaaatca tttgcttaaa acttttgaaa ttgaagattt
      541 aagatataaa aaaatcgatg aaatttcagg agggcaagcg caaagagtgg cttttgctag
      601 agctatagca agaggatgtc agcttttgct tttagatgaa cctttttcta atttggatca
      661 aaatttaaaa caggatttaa gaagagaatt gaaaaaaatg atagaaaatc aaggcattac
      721 ggctattatg gtaactcatg atattgaaga tgcttattgt atgtctgatc aaatcgcttt
      781 tttagaaaaa ggaaaaattt tagctcatgc aaatcctaaa gagctttatt ttaagcccga
      841 ttttaaaagt gcgcaaattt tacctgattt aaatatcata gaagaaaaac ttgatttaga
      901 agatgaattt tttgcttgga tagcttcaaa aaattatatt tttggttatg cagaacttaa
      961 aataggaaat cgctttgagg ctaaaatttt acaaaaagaa tttttagggg ctttttatag
     1021 acttaagtta agatataaaa atatagaatt ttttatgtta ttaagctcaa attataactt
     1081 agaagaaaaa ataaattttg atattatcaa tttttagtta aaattcctaa aaatctttta
     1141 aggacaaatt tcatgaaaaa tcttttaatc ataggcgcag gtggagtaag tcgtgtggct
     1201 actgtaaaat gcgcaatgaa ttctgatact tttagcaaaa tcactttagc tagtagaaca
     1261 aaaagcaaat gtgatgaaat cgctactttt atcaaagagc gtttaggggt tcaaattgaa
     1321 acagcgcaaa ttgatgctga tgatagcaat gcggttgtag aacttatcaa gaaaacagga
     1381 gcgcaaattt tactcaatgt tgctttgcct tatcaagatt tgagtttaat ggatgcttgt
     1441 ataaaagcag ggattgatta tatagatacg gcaaattatg aacatcctga tttagctaaa
     1501 tttgaataca aagagcaatg ggcgagaaat gataagttta aacaagcagg aattttagga
     1561 cttttaggaa gtggatttga tcctggtgta actaatgttt tttgtgctta tgcacagcaa
     1621 aatttatttg atgaaatttc ttatatagat attttagatt gcaatgcagg tgatcatggc
     1681 tatgcttttg cgacgaattt taaccctgaa atcaatctgc gtgaggtttc tgctaaaggg
     1741 cgttattggg aaaatggcaa gtggatagaa acgcagccta tggaaataaa aatggagtgg
     1801 gattatccag aagtaggagt gaaagatagc tatttgcttt atcatgaaga acttgaaagc
     1861 ttggtaaaaa atatcaaagg tttaaaaaaa atacgctttt ttatgacttt tggacaaagt
     1921 tatttaactc acatgaaatg tcttgaaaat gttggaatgc tagggattaa acctgtgata
     1981 caccaaggta aagaaatcat tcctatagaa tttttaaaaa ccttgcttcc tgatcctgca
     2041 agtttaggac cacgcactaa aggttatacc aatataggtt gtgtgattcg tggtaaaaaa
     2101 gatggaaaag acaaacaagt ttatatttat aatgtttgca atcatgaaga atgttacaaa
     2161 gaaactggcg cgcaagctgt gagctatact acaggtgttc ctgctatgat aggtacgaaa
     2221 ttaatcgcta aaggaatttg gcaaggaaaa ggcgtgttta atatggaaga atttgacgct
     2281 aagcctttta tggaagagct gaattctcaa ggacttcctt ggaagattat cgaaatgact
     2341 ccaagcttag gagagtaaaa aaggcatcgt tttgatgcct ttaaattatt ttacagggtg
     2401 aagttcattt gcataaaagc taactgatcc catgccttct tttaaagccc attcgtaagc
     2461 ttttgcaaca aattcccagt taatatgagc atagaatttt tctaaataag cagggcgtgc
     2521 attacgatga tctacataat aagcatgttc ccaaacatct acaacaagta aaggaacttt
     2581 atcttcagta attggtgtag ctgcgtttga agtacctaca aattctagtt tttgattttt
     2641 agtattataa actaaccaaa accatcctga accaaaaact cctgtagcac ctttgatgaa
     2701 ttcagctttg aaattttcta aagatccaaa ttctttttct agtgccactt gtaaattagc
     2761 atctatactt tgacatgaac cgccacagcc acagcctgta cttggcttaa tgcaatcaaa
     2821 ataaaaatca tgattataaa cttgagctgc gttattaaat acgcccccat ttgaagtttt
     2881 gataatactt acaagatctt tacctgcaaa ttcagtatct ttaataagat tatttagatt
     2941 tgtaacataa gtattgtgat gttttccatg atgatagcta aaagtttcag cactcaaaaa
     3001 atcaccaaaa gcattggtat cataaggtaa ttttcttaat tcaaacataa tttctccttt
     3061 atttttagtt tgatattgaa aatattacca taataatatt aaaaagagta aaaatatctt
     3121 aaaagcttag tgggtaaaat ttctat
//
LOCUS       DARATF010000132         2942 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.132, whole genome shotgun sequence.
ACCESSION   DARATF010000132 DARATF010000000
VERSION     DARATF010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.132"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            173..856
                     /locus_tag="SB502_001692"
     CDS             173..856
                     /locus_tag="SB502_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEG0435090.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNETIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQQTPQASSYQSVSLTSNSELLKEIKSAIDEALIYPRQAR
                     KMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYEKTFHI
                     KIPLVYKLS"
     gene            complement(948..1770)
                     /locus_tag="SB502_001693"
                     /pseudo
     CDS             complement(948..1770)
                     /locus_tag="SB502_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843529.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2199..2293)
                     /locus_tag="SB502_001694"
                     /pseudo
     CDS             complement(2199..2293)
                     /locus_tag="SB502_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1109 a          454 c          328 g         1051 t
ORIGIN      
        1 agaagtaaat agcaaaaatt aaatatcttt tagatacaag cttgattatt tgattgttat
       61 ttttctctgt gaaatttgtt tcaaaattta tctttttaaa caatttatca tagaatgtgt
      121 ttaagaaata aagatattta aatcaaaaaa taaaatcata acggagtaaa agatgaaaac
      181 atttataagc aatcataaaa accaatcttc ttttatcact ttatttgttt ttacaccttt
      241 attttttgtt tttctttatt ctaaagattt tttacacata caacccaatg aaactattaa
      301 agaaaataaa tttaatatgg caatcaaaca ttttgtacaa aattcctccg atatgaaacc
      361 gacacaacct acacaaacta tacaagagcc ttcgaatgtg caacccaaag aacctgtgca
      421 agaaataaaa aaaataaaac cgagaaaaga aaaacctatc gctaaaccta aaaaaataat
      481 ccctccagca aatgcaaagg caataagtca acccaaaaaa gatacaaaca tgcagcaaca
      541 aactccacaa gccagctctt accaaagcgt atctttaact agtaatagtg agcttttaaa
      601 agaaataaaa tcagcaatcg atgaagccct aatctaccct agacaagcta gaaaaatgcg
      661 tatgagtggg gaggttcttg tagaatttac ctggacaaaa gaaaagaaat tagaaaattt
      721 aaaaatactt aagccttcaa aatatgattt tctaaataaa agtgctttag aaactatacg
      781 catagcttct aaaaaatttc cacaatatga aaaaactttt catataaaaa taccattggt
      841 atataaatta agctaaatct ttcacaatat actctatttt taatacaaat cactccagct
      901 ttgctaacgc ttagaagtag aagcttccta gctaaagcta actagtatta gctaattcga
      961 aaggctttga gtttatagtc ctcaaggcta attcctaacc caaacgactt taatccacgc
     1021 tttaagatat tatttgcagc attaatatct ctatgtaaag tattgccaca tttttcacaa
     1081 agatacactc tatctttaaa cataagattt tttttgatat ttccacatac actacaagtt
     1141 ttgcttgtat attgtggatt gacttttata aagaatttgc cattatgctt tgctttatac
     1201 tctagatatt gagagaattg atagaatgaa gtattaagaa tagatttatt taaaccactt
     1261 ttagctttta tattctttaa tttagctctt ttacacatat tcttaatttg caaatcttca
     1321 actgctagca agtcaaattc ttgtatgagt tttgaagtta tcttgtgata actatccttt
     1381 ttgatatttg aacttttttc atagatttta tttaatttta attgtgtttt tttgaaatta
     1441 tggcttaact ttgttttctc cttttttgtt tttaatattc tcctgctttg ttttctttgc
     1501 aatcttttaa tattcagctc tactaagtag ctttaagtta gtagctatta actctccact
     1561 gcttaaggta atctcattga tatttaaatc aatgtcaact gtttttttaa tatcaaaatc
     1621 tttgctagat attaaagaaa catttgattc atcataaatg atactaaaag ctaaatagta
     1681 tttattgtga tttttgataa tagtgatttg attaaactta taagtatttg gtaaatctct
     1741 gtgataacgc attttaaaaa atgtattcat aagtctaaat atcttaaact tagtagtatc
     1801 actatctttg attttgtagg cttgattatt ccaattaaag ctttgctttg caaatttaga
     1861 gtttttaaat ttgggaaagc ctttttttta tctctaattg cttgctctaa ggcacgagaa
     1921 gattaatcct tgcttgttgg gttacaacac ttttatagct taattctctt gcttttataa
     1981 ggctagtttt attgattatc tatcttactt gcctttaaat aactcctatc ttttttatct
     2041 aaattcttat ttttatccca ctgctcttgc tgtaaattta aacaaatatt ataggcttga
     2101 tatagatgaa acattgatga ttaataagct tttgttgttc tttgtttagg tagaattcta
     2161 tatttaaaac ctttggttat ttgcattgct ttgttccatt agggcttttt ttctttttgg
     2221 ttatatattt tttcttaggg taattatctt ctatgccttg attttctgca tattttttaa
     2281 gagtttctag cattattccg cataggtatt ctataaaaat actgattatg tcaaatacct
     2341 aactagagcc gtacaactaa cactgtaagc aattcatctc ccacttaaga agtgagagtt
     2401 ttattgaata aaaaaagata aatttaaagc aagtaatctt tttttagaca acactaaacc
     2461 cttgcatgta tttacagtaa tatttatttc atcataaaca acccccaacc cataaacctc
     2521 aataaacact ataaaataaa cttgagtgat taaaaatcca acccaattat tgaacaaacc
     2581 caacctacat aataaaatat aaactagaca tataaagaac aattgacaca taaaaataga
     2641 ttgaataaat aaacctatac aagtaaacat aaagattaat tattgataca aaagattcaa
     2701 taaataaaaa gaataattga gatataaaaa catataaact aaacaactca aacaaccatt
     2761 aaattaaccc aagccaatca acaaccatag ctaagctgac aacacaacaa atcaatttaa
     2821 atataaaact acaaattaaa tcaacccaag ctaattaaac ctataaacat aaaaaaataa
     2881 ttaaatataa aaacaacgat tgacatataa aaactaagat tttaaatcta taagaataag
     2941 at
//
LOCUS       DARATF010000133         2789 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.133, whole genome shotgun sequence.
ACCESSION   DARATF010000133 DARATF010000000
VERSION     DARATF010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.133"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1826
                     /gene="rpoD"
                     /locus_tag="SB502_001695"
     CDS             <1..1826
                     /gene="rpoD"
                     /locus_tag="SB502_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEG0435091.1"
                     /translation="ENAKDYITYEKLVKYLTKQPSASTTKKVQALMKKHKVQLFSAAE
                     IAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDSPVRMYLREMGQIA
                     LLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSFDD
                     EEKSDDKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVIEKFKALEKAKKDW
                     LKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSMETALKSDEEFD
                     KELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTYMEIKKLFQT
                     KEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKRYTNRGLPF
                     LDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIET
                     INQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPIGNEDDG
                     KFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDESDRTLE
                     EIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(1842..2354)
                     /locus_tag="SB502_001696"
     CDS             complement(1842..2354)
                     /locus_tag="SB502_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEG0435092.1"
                     /translation="MKKIYIIRHAKASKSEDIDDFERKLTKSGKEDLKKLFKNLASHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNRICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPSLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(2351..>2789)
                     /locus_tag="SB502_001697"
     CDS             complement(2351..>2789)
                     /locus_tag="SB502_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEG0435093.1"
                     /translation="NILFFNGAYWQLLSSMFLHGNLTHLILNMIVLFQFGRMLETYLG
                     ALCFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVLMGFYAVIDKNST
                     KGLIVAILLMSFVPLLMGVNVAWYGHIFGFMCGYILAKIKEVK"
BASE COUNT         1185 a          422 c          411 g          771 t
ORIGIN      
        1 aagaaaatgc aaaagattat atcacatatg aaaaattggt aaaatatctt acaaaacaac
       61 caagtgcatc aaccactaaa aaagtgcaag cattaatgaa aaaacacaaa gtgcaacttt
      121 tttcagcagc tgaaattgca caaatgaaaa acatagaaga tgcaaaaaga cttcaagaag
      181 aaaaacaaaa actccaagat acaagccttg agaacgaatt tgatttagcc aatgaaaacg
      241 atttattaga atggagcaga tcagactctc ctgttcgtat gtatttaaga gaaatgggac
      301 aaattgcttt attaaacaaa gatgaagaaa ttgaaatttc caaaaaaata gaacttggcg
      361 aagatattat cattgatgct ttttgttctg taccttattt gatagatttt attttagatt
      421 ataaagaacc tttaataaac agagaaagaa gggtaaaaga actatttaaa agctttgacg
      481 atgaagaaaa aagtgatgat aaacttgatg aacttgatat agatgaagat gaagaaaacg
      541 aaacagaatt agaatcagat gaagaaaata ctaaaaaaaa cagcaaaaaa gaagatgaaa
      601 gaactttaaa agttatagaa aaatttaaag ctctagaaaa agctaaaaaa gattggctaa
      661 aaacatccaa agacaaagaa agcggagatg aacttttaga taaattaagc attgcgttca
      721 aaaaaaatat tttaaaagaa aaattaatgg atctaggccc tacttcaaaa cttattagcg
      781 aaatcgtaaa atcaatggaa actgcactaa aaagtgatga agaatttgac aaagaactta
      841 agcgtttaga ataccgctta cctatgtttt ctgatgaact taaaaaacgc catgcagata
      901 ttttaaaaga tattacaaaa ttgagcaaag aagaaatcac agagcgagct ttagaaacaa
      961 ccatggtaag cacttatatg gaaattaaaa aactatttca aactaaagaa gccagtgaaa
     1021 aaagctttga tcttgaaaaa tcacgcttaa aagaaatttt ggagcaaatt aaacgcggta
     1081 aaaaaatctc tgatgaagca aaaggaagaa tggcaaaatc aaacttgcgc cttgttgtaa
     1141 gcatagctaa acgctacaca aatcgtggtc tgcctttctt agaccttatc caagaaggaa
     1201 atataggttt gatgaaagct gtggataaat ttgaatacaa aaggggttat aaattttcca
     1261 cttatgcaac ttggtggatc aggcaagcta tttcaagggc tatagctgat caagcaagaa
     1321 ccataagaat tccaatccat atgatagaaa ccatcaatca aattaataaa attatccgcg
     1381 aacatctaca aaaagatgga aaagaacctg atgtcagtgt tatagctaaa gaagtaggtt
     1441 taagcgtaga taaggttaaa caagttatta aaatcacaaa agaaccaatt tctcttgaag
     1501 ctccaatagg aaatgaagat gatggtaaat ttggagattt tgttgaagat agaaattcac
     1561 tttctccaat ggatcatatc ttaaaggatg atttaaaaga acaaattgat gaagttttag
     1621 atcaattaaa cgatagagaa aaagcggtaa ttcgtatgcg ttttggttta atggatgatg
     1681 aaagtgatag aactttagag gaaattggaa aggaacttaa tgtcactcga gaaagagtga
     1741 gacaaataga aagctcagct ataaaaaaac tcaaacaccc taaagtagga agaaaactaa
     1801 aaaattatat agaaggttgg aagtaagagt caatctcctt actaaaaacc cagatctttt
     1861 tcttctttta acttgcgtac atgttcaaaa aaaactaatt ttccgctatg tttttttaaa
     1921 tttttaaatt ccttaatatc aaattctaaa cacaagatag aagaagttgg aaaagaagct
     1981 aaacatagcg aacttaacaa ctctccaagc tccattaaac taggattatg acccactaaa
     2041 aatacttcat taaactcatc atcaatatct tgcagaattt ttagcaaatt ttcaacattg
     2101 caaagataca atctttcatc aaaacaaatt ctatttttat caaaattata aaatttggct
     2161 atttttttcg ctgttttagc ggttctaaca gcaggacttg atagcaccaa atcaggatga
     2221 atttcatgcg aagcaagatt tttaaaaagt ttttttaaat cttcctttcc actcttagta
     2281 agttttcttt caaaatcatc gatgtcttca ctcttacttg cttttgcatg tcttataata
     2341 taaatttttt tcattttacc tcttttattt tagctaaaat ataaccacac ataaacccga
     2401 aaatatgacc ataccaagca acatttaccc ccataagcaa tggcacaaaa ctcataagta
     2461 aaattgccac tataagtcct tttgtgctat ttttatcaat aacagcataa aagcccatta
     2521 aaacacaaat tgcaccacta gcgcctatga catttatatt ttctccaaaa tatttaaaat
     2581 caaaatacac ataaaaaaca cttaaaagtg agcacaacaa tccgccaata aaataaataa
     2641 aaataaaaca caaagcaccc aaataagttt ctaacatacg cccaaattga aacaaaacta
     2701 tcatatttaa tataagatga gttaaatttc catgtaaaaa cattgaactt aaaagctgcc
     2761 aataagctcc attaaaaaat aaaatattc
//
LOCUS       DARATF010000134         2753 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.134, whole genome shotgun sequence.
ACCESSION   DARATF010000134 DARATF010000000
VERSION     DARATF010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.134"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..298
                     /locus_tag="SB502_001698"
     CDS             <1..298
                     /locus_tag="SB502_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435094.1"
                     /translation="NFISSLFIKKKQNLSKIIHFKVLKDDLKPNVKEKIHFFAMFFTL
                     FKLMAYVILVAGFLFLHRQDKLDIFAYICGISSLLVCVFIFILYIKKYESKKNY"
     gene            276..1463
                     /locus_tag="SB502_001699"
     CDS             276..1463
                     /locus_tag="SB502_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0435095.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFIGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAVL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMTSLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIVSLAFLILFAINKPNILNKKFKKKPGNMVI
                     FDD"
     gene            1456..>2753
                     /locus_tag="SB502_001700"
     CDS             1456..>2753
                     /locus_tag="SB502_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0435096.1"
                     /translation="MINTQLASQIANTQKNDLKVDNSASKDKTNLKDNPKEALAQALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKILSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATTFEKLENTLKNILGNQASKIQDKENILENLLSNKENI
                     KEEKLNHNTKNQDEEKYIKVSKEETLADDAKTNIKQNVKNEENLPKKEVNANLDSSTK
                     THEENIKENPKFYETKTESKTSINTNTNTNNTQNLNNSQN"
BASE COUNT         1053 a          382 c          369 g          949 t
ORIGIN      
        1 taatttcatt tcatcacttt ttatcaaaaa aaaacaaaat ttatcaaaaa ttattcattt
       61 taaagttcta aaagacgatt taaagccaaa tgttaaagag aaaatccatt tttttgctat
      121 gttttttact ctctttaaat tgatggctta tgtaatattg gttgctggat ttttattttt
      181 acatcgccaa gataaattag atatctttgc ttatatttgt ggaatttcat ccttgctagt
      241 ttgtgtgttt atttttattt tatatataaa aaagtatgag tccaaaaaaa attattaaat
      301 caatgacagc actttttgct ggtatggcat ttttatttgc aggtaatgcc ttgatagtaa
      361 gctctatagg tgttatatta aaagaaaacg gagaaagttc tttagctgtt ggagtggtaa
      421 gttcttgttt ttttataggc gctcttgttg gaaccatcag tgctcataaa attatttctc
      481 gtataggtca tatacgctct tttgggctat ttggtgctat ttttggaatt tcagctatgc
      541 ttcatacagt aagcgaaaat cttatttttt gggctgtttt aagatttttc ataggaattt
      601 gctactatgg acttttaatg gtcatagaat catggcttaa tgaaaaaagc aaaaatgcca
      661 ttcgatctag aattttaggt ttttatgaaa ttgtttttta tcttgcgttt ggtattggag
      721 ttttaatcat agcgttaaat ttaagcaaac atagtgtatt tatcctcagt gcaactttaa
      781 ttttactttc atctttacct ttaaatctaa ttaaaatcaa agaacctgtt ttacccgcat
      841 caagtcctat ttctatacct aaaatttttg atatagctcc tttagctatc gtcacaagct
      901 ttatagccgg aatgcttata aatggctttt tttctatgac atctttattt atacttttgc
      961 aaggttttga tacaaaagcg gtttcttatt ttatattttg tggggtttta ggtggtttta
     1021 ttgcacaaac catcatagga actatttcag acaaacttgg tcgcaaattt gccattatca
     1081 cttgtgcaag tataggattt atcactatgc ttatatttat cttttttaaa cttcatttat
     1141 atatgcaata ttttttagga attactcttg gtataggaat attttgctta tatgctttag
     1201 cacttgctag agcaaatgat gttttagtaa gcaaaaataa aggtgtagag ttaggtcgtg
     1261 gggttctttt ttgttattct ttgggctctt tgtttggccc tttaatttta ggttttttaa
     1321 tgcaatattt tgaaatcaaa ggttttatat ggttttatat agtttcttta gcatttttaa
     1381 ttctttttgc tatcaataaa ccaaatattt taaataaaaa atttaagaaa aagcctggaa
     1441 atatggtgat atttgatgat taatactcaa ctagcaagtc aaattgccaa tacgcaaaaa
     1501 aatgatttaa aagtagataa ctctgcttca aaagataaaa caaatttaaa agacaatcca
     1561 aaagaagcac ttgcacaagc tttaaagcaa aatttaggtt taagcaagga cgctagtagc
     1621 gaggaaatac tagcaaaatt tgttcaaaat gaaacaggta ccaaattaaa agaacttgtt
     1681 aataaacttt tagatcaaat caatgctcaa aaaaatcccg attcccctgt acttaaacaa
     1741 ggaaaaaatt taaatttagc tcctaatttt gctaatgaat taaaaatctt aagtacagaa
     1801 ctagcaaaaa gtgatacttt tacacaagtt ttagacagat taaatcaaat tttaaaacct
     1861 gccagtgaaa taaaaaacaa taacttagct cctttgttta aaaattcagg cgtattttta
     1921 gaagctaaat taaaagatgc cctaaacgaa gaattactac ccaaaagttt tcactctctt
     1981 ttaagtacaa tcaaaggtct tagtagcgaa aaactaagcg ttcagatagc ccagcttgca
     2041 aatacaaatt taagcccaaa agacacttta aaagaattaa aaaatattat taattctagc
     2101 aaaaatgaaa ataagcaaat tttaaatcaa agttctttta aagcactttt aaatttaagt
     2161 tctaaattgg aaaattttaa aaattatata agtaaaaatc ccagtcatgc tcaagaaaaa
     2221 atcaccccta tagctaataa aattttaaaa gaattaaatt ccatcaaaaa tgattttttc
     2281 aaagctctta ataagccaga aaatttaatg ataaaagatc caaacatcct taagcaaact
     2341 gctaccacct ttgaaaaact tgaaaatact ttaaaaaata tactaggcaa tcaagcttct
     2401 aaaatacaag ataaagaaaa tattttagaa aatcttttaa gtaacaaaga aaatatcaaa
     2461 gaagaaaaac ttaatcataa cacaaaaaac caagatgaag aaaaatatat aaaagtatca
     2521 aaagaagaaa ctctcgcaga tgatgctaaa accaatatta agcaaaatgt aaaaaacgaa
     2581 gaaaatttac ctaaaaaaga agttaatgca aatttagatt ctagcacaaa aactcacgaa
     2641 gaaaatatca aagaaaatcc aaaattttat gaaacaaaaa cagaaagcaa aacttcaatc
     2701 aatacaaata ctaacacaaa caacacgcaa aatttaaata attctcaaaa tat
//
LOCUS       DARATF010000135         2528 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.135, whole genome shotgun sequence.
ACCESSION   DARATF010000135 DARATF010000000
VERSION     DARATF010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.135"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..388
                     /locus_tag="SB502_001701"
     CDS             <1..388
                     /locus_tag="SB502_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEG0435097.1"
                     /translation="LLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFA
                     KLDLATFSKEFKKCFGQSPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFI
                     ERFKEKYEQTPKQYQKTKNLYFLSKN"
     gene            451..1302
                     /locus_tag="SB502_001702"
     CDS             451..1302
                     /locus_tag="SB502_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0435098.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKI
                     FKVELNK"
     gene            1310..2473
                     /locus_tag="SB502_001703"
     CDS             1310..2473
                     /locus_tag="SB502_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HEG0435099.1"
                     /translation="MASFKKIFWINVIIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     MGCGIAIANVLLPSFIKEKFPKKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGA
                     MFFWAIFSFVALVVYYPQAKNGRFFRIKKKAHKKINLFINFTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFSTSMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIAGLC
                     SMYVIAFGMLFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALS
                     QGFGYLIAAQGQWIIGFLHDKFENFSFAILMLVFVGILVNIFGYLSYKSQIIK"
BASE COUNT          825 a          274 c          434 g          995 t
ORIGIN      
        1 gcttttaaat aagaatattt attttattag ttttttatca ggaattttaa aagaatttcg
       61 ccttgatctt tcccaacttt ttgagtattg tggtagagaa tttttaagcg taaatgaaat
      121 gtctaatttt gcgaaattag atttagcaac tttttctaaa gaatttaaga aatgttttgg
      181 acaaagtcct aaaaaatggt tagatgaaaa aaggttgcaa aaagcaaaga ttttacttaa
      241 attttctaaa aaaaatatca atgaaatagc taatgagtgc gctttttctt cggtagcttg
      301 gtttattgaa agatttaaag agaaatatga gcaaactcct aagcaatatc aaaaaacaaa
      361 aaacttgtat tttttatcaa aaaactagca catttttttt atctaaataa atataattca
      421 atgaaaatat ttttaaataa aggagaaaat atgaaaaaat atgttttaag tttagcgctt
      481 cttggaagtt tgcttggtgc aagtgaatta aaatatcaag aatttgatgg ttttaaaagc
      541 cctgaaagta tttttgtaga taaaaactat gtttatgtat ctaatgtagg agaaaaactt
      601 gaacctttgg cgaaagataa tgatggattt atttctaagc ttgataaaaa tggcaaagtg
      661 ctagaatata aatttttaac ccatcttaat gcaccaaaag gcatgatgga gattggaaaa
      721 actctttatg tggtagatat cgatgtttta cgcggttttg atcttaaaac taaaaaagaa
      781 atttttaatt tacctattaa aggtgcaatc tttttaaatg acatagaaaa attagacgac
      841 aatacgcttt tggttagcga tactggcaca gggcttattt taaaggttga tttaaaaact
      901 aagcaatatg atgaattatt aaaacttgat ttagcaaaat ttggcggtcc aaatgggtta
      961 tatctagata gaaaaaaaca taagcttttt ataactggtt atcatcctga tggtgtaagt
     1021 ggcggtgttg taatggctta tgatttaaat acaaaagaac tcagtataat taaaaatgaa
     1081 aaagaatctt atgatggaat agttccttat aaagatggtt tattggtaag ttcttgggga
     1141 aataatctaa atggatatat ttataattta gataatgtta aatctgtaaa acttgaactt
     1201 cctttgatga aaggtcctgc agatatattt attgaaggta atattttatg gattcctaag
     1261 atggcagaag gtaaaatatt caaagtagaa cttaacaaat aaggctttta tggcttcttt
     1321 taaaaagata ttttggatta atgttattat tgttattatt gtagctttta atcttagagc
     1381 cccaattact gcagtggggc ctattattga tattattaaa gataagtatt atttaaactc
     1441 aaccgtagca ggtatactta caagtcttcc tttgatagct tttggaagta tttcttttat
     1501 tgtggggtat ttttctccta ttcgtgctat tgtttttgga atttttttaa tttttttagg
     1561 cgaaattatt cgttcttatt ttggtgtata tggcttattt ttaggaatgt tagcaatggg
     1621 ctgtggtata gcaattgcaa atgttttact tcctagtttt attaaagaaa aatttccaaa
     1681 aaaaatggca agtataatgg gaatttatag tcttgttttg agtatttctt cgattatggg
     1741 tattgcttta gctatacctt tgcttagtgt atttgattta gctggagcta tgtttttctg
     1801 ggctattttt tcttttgtag ctttagtagt ttactatcct caagctaaaa atggtagatt
     1861 ttttcgtatt aagaaaaaag ctcataaaaa aatcaatctt tttataaatt tcacaacttg
     1921 gaaaattact ctttttatgg gatttcaaag ttttttagct tattctttgt ttttttggta
     1981 tgttcaaatt gttgtagaaa aaggatttga taaagaattt tctacaagta tggttttatt
     2041 tgctcaactt gttgcagctc cagtgtctct ttttggccct ttacttttag gaaaattaag
     2101 acaaaattta catacttttt acatagcagg tttgtgcagt atgtatgtga tcgcttttgg
     2161 tatgctcttt atttttgata gtaaaatttc tattattatc agtgctttta tcatgggttt
     2221 tccatggggt ggagtttttg gcattgcgtt gctttttatt gcacaaaaaa gctctaatgc
     2281 tcaaatagca gcgagacttt ctgctttatc tcagggtttt ggatatttaa ttgcagcaca
     2341 aggacaatgg attataggtt ttttgcatga caaatttgaa aatttttcat ttgctatttt
     2401 gatgttagtt tttgttggaa ttttagtaaa tatctttgga tatttatctt ataaaagtca
     2461 aattatcaaa taaagctttt tggattagca tatctgcgcc atttttttgg gttatatttt
     2521 gcaatctt
//
LOCUS       DARATF010000136         2507 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.136, whole genome shotgun sequence.
ACCESSION   DARATF010000136 DARATF010000000
VERSION     DARATF010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.136"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            28..144
                     /locus_tag="SB502_001704"
     CDS             28..144
                     /locus_tag="SB502_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435100.1"
                     /translation="MPMKKIILFLLCFGFAFACSEHSHTDFKDLNKTEYNSQ"
     gene            155..1159
                     /locus_tag="SB502_001705"
     CDS             155..1159
                     /locus_tag="SB502_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0435101.1"
                     /translation="MKKIFLMFLTAFSFLGASELNIYSARHYDADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEIGFR
                     "
     gene            1159..>2507
                     /locus_tag="SB502_001706"
     CDS             1159..>2507
                     /locus_tag="SB502_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEG0435102.1"
                     /translation="MYKTLKYYKLGAILLALFLALPIFGIFAELFYILFQNFNTSNLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISVGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRMDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALITALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKFFHMSLLGNSLLVLVFAYIIRFLASAIYSLEGGYSKIHLNIDEASLNLRASYF"
BASE COUNT          828 a          300 c          399 g          980 t
ORIGIN      
        1 cttatcaaaa tatataaaaa ggaattaatg cctatgaaaa aaataatttt atttttactg
       61 tgctttggct ttgcttttgc ttgctctgaa cattctcata ccgattttaa agatcttaat
      121 aaaaccgagt ataattctca ataaaggata aaatatgaaa aaaatctttc ttatgttttt
      181 aacggctttt tcatttttag gtgctagtga gcttaatatt tactcagcaa gacattatga
      241 tgctgatttt gaaatcataa aaaaattcga agaaaaaaca ggtattaagg tcaatcatac
      301 tcaagctaaa gcttcagaac ttattaaaag actttctctt gaaggaagta attcccctgc
      361 tgatattttc atcacagctg atatttcaaa tcttacagaa gctaaaaatt taggactttt
      421 atcccctgtt tcatcaaaat atttagaaga atttatacct gctcatttaa gagataaaga
      481 taaagagtgg tttgcgatta caaaaagagc aagaattatt gcttacaaca aaaacgcaaa
      541 tatcgatatt agcaaaatga aaaattatga agatttagca aaagctgaat ttaaaggaga
      601 aattgttatg agaagtgcta cagctcctta tagcaaaact cttttagcat ctattatagc
      661 taatgatgga aataaagagg ctaaagcatg ggctaaaggt gtgcttgaaa atcttgcgac
      721 aaatccaaag ggtggagata gagatcaagc cagacaagta tttgcaggcg aagctaaatt
      781 tgcagttatg aatacttatt atatagggct tttaaagaat tctaaaaatc caaaagatgt
      841 agaagtgggc aattctttgg gtattatttt tcctaatcaa gacaatagag gaacgcatat
      901 taacattagc ggtattgcta tgacaaaatc aagtaaaaat caagatgcgg ctaaaaaatt
      961 tatggaattt atgttaagtc ctgaaattca aaaaattctt actgatagta attatgaatt
     1021 tcctataaga aatgatgtag aattaagcca aacggtaaaa gattttggaa ctttcaaaga
     1081 agatcaaatc cctgtgagta agatagcaga aaatattaaa gaagcggtta aaatttacga
     1141 tgaaatcggt tttagataat gtataaaacc ttaaaatact ataaactcgg ggcaatttta
     1201 cttgcccttt ttcttgcttt gcctattttt ggtatttttg ctgaactttt ttatatttta
     1261 tttcaaaatt ttaatacaag taatttaacc caattttcat ctattaaaga aaatttgagt
     1321 catttttttg attatttatt tttaaaattc atcaaagata cttttataat tagcgtggga
     1381 gtattgtgtt taagcttgat tttgggtgta agttctgctt atttgatcgc aaattatgat
     1441 ttttatttct gtaaaatttt agaaaaatta ctcattttac ccttagccat acctgcttat
     1501 attttagcct ttgtttatgt gggaattatg gattttcaag gattttttca cgaaaatttt
     1561 ggctttagga tggatttttt caatcattat ggtgttattt ttgttttggc tatttcttta
     1621 tatccttata tttatttatt tgctaaaaca gcttttaaaa gtgaagctaa agaggcttat
     1681 gaagtagcta aaatcatgaa atattctgaa tttagaattt ttacacgcgt ggcacttttg
     1741 agtgcaagac ctgccatttt ttctggagct ttattggttt taatggaaac tttgagtgat
     1801 tatggtgcaa gtgcttattt gggagtggat actttttcgg ctggaatttt taaactctgg
     1861 tatgatttga atgattctta ttcttctagt gttttatcgg gtattttaat gctttttgta
     1921 tttttgatta tgtatgtgga ttattattat aaaaataaac atcattatag ttttaatcaa
     1981 aatttagctc tttttatcaa aaaaagaaaa ttaaatccta ttaaacaaat tctatcctgt
     2041 atttattgtt ttatgattgc ttttgtaggt tttattttac cttttatttg gctagtttat
     2101 tgggggctaa aagatcataa gctttttgaa tcgcaatttt atattatcag ttttcaaact
     2161 ataatcttag ctttaatcac tgctttaatt accacttttt tagcttattt tttgatgttt
     2221 agctctagga tagttaaaaa tcattttttt aatttattta ttttaaaaat aagttctttg
     2281 ggttattcta tacctgctgc tgctttaggg attagcatta tagtgctttt tgtatttttg
     2341 gataaatttt ttcacatgag tttattggga aattctttac ttgttcttgt ttttgcttat
     2401 ataattcgtt ttttagcgag tgcaatttat tctttagaag gaggatatag taaaattcat
     2461 ctaaatattg atgaggcaag tttaaattta agagcgagtt attttat
//
LOCUS       DARATF010000137         2495 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.137, whole genome shotgun sequence.
ACCESSION   DARATF010000137 DARATF010000000
VERSION     DARATF010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.137"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1298)
                     /locus_tag="SB502_001707"
     CDS             complement(<1..1298)
                     /locus_tag="SB502_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEG0435103.1"
                     /translation="MSSIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFIMMSFALADMIAIGSAVQISMHLGLGKKNLARKIFSSSMLIIFII
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMAKECMFVFALFAPFTMLSFALDNYLRICGK
                     TAYSMVMNVIIALSNIVLDYIFIVELGWGLFSAALATCLGLVLGGIFGIFPFLFQNLE
                     LKISSLYMNLKIFKNILYNGSSEFFGNISGSLYSIFANFVLLKISDTQAVAAFSIVLY
                     IDSFIIMLIIAMGDAMQPVLSYNYAKKDFSRIKAIVKVVFFAGGFLSLFSIVLILIFG
                     ENLITLFTKENNQEFKTFAYTALMLFAFNYFFAWFNVLSGSFLTAFNKASFSLVLSLA
                     QNLFIPLFFLLLLSYFIGLNGVWLSPFFAEFCVLILACIFL"
     gene            complement(1479..2414)
                     /locus_tag="SB502_001708"
     CDS             complement(1479..2414)
                     /locus_tag="SB502_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEG0435104.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
BASE COUNT          965 a          447 c          278 g          805 t
ORIGIN      
        1 agaaaaatac aagctaaaat caaaacacaa aattcagcaa aaaatggact tagccatact
       61 ccatttaaac ctataaaata agataaaagc aaaagaaaaa acaaaggtat aaataaattt
      121 tgcgccaaac ttaaaaccaa agaaaagctt gccttattaa aagctgtcaa aaaagaacca
      181 cttagaacat taaaccatgc aaaaaaataa ttaaaagcaa aaagcatcaa agctgtataa
      241 gcaaaagttt taaattcttg attgttttct tttgtaaaaa gcgtgattaa attttctcca
      301 aatatcaata taagcactat agagaataaa gataaaaatc cccctgcaaa aaataccact
      361 tttacaatag ctttgattct tgaaaaatct tttttagcat agttgtaact aagcacaggc
      421 tgcattgcat cacccatagc aataataagc attataataa aactatcaat atataaaact
      481 atagaaaagg ctgccacggc ttgagtatca gaaattttta ataaaacaaa atttgcaaaa
      541 atactatata aagatcctga aatattgcca aaaaactcac tgcttccgtt ataaagaata
      601 tttttaaaaa tttttaaatt catgtatagg cttgaaattt taagctctaa attttgaaac
      661 aagaaaggaa aaattccaaa aataccacct aaaacaagtc ccaaacaagt tgcaagagca
      721 gctgaaaata agccccaacc caactcgact ataaaaatat aatcaagcac tatattgctt
      781 aatgctataa ttacattcat taccatacta taagcagttt ttccgcaaat tcttaaataa
      841 ttatccaaag caaaagaaag catagtaaag ggtgcaaaca aagcaaaaac aaacatacat
      901 tctttagcca tcgttttaat ctcatcgcta acatttaaac aatcaatcaa aacaggtcct
      961 aaaaaatact ctaaaattcc aataaaacaa gagattataa aaataatcaa catacttgag
     1021 ctaaatatct ttctagctaa attcttcttg cctaaaccta aatgcataga aatttgcact
     1081 gctgatccta tggctatcat atcagccaaa gcaaaagaca tcatgataaa gggaataatc
     1141 aaggctagtg ccgctaaagc atcacttcct agatattttc caacaaaaat tccatcaact
     1201 atataataaa aagaaataaa agccatgctt ataacatttg gcacggcaca ttttacaaaa
     1261 agcctaaaag ggcttaaggt gctaaaaata cttgacataa taatccttaa aatatttaaa
     1321 attaaaaata ttttaaaccg ctaataaaat gccaaaagtc ctagtatgta agaatttaaa
     1381 taaagtaatt tcgcaataag tttattaata tttattttat tttgcatatg aattttctag
     1441 attaaactaa aataaaaatt tagcccaaag gctaaatttt aaagcacaga aagaattttc
     1501 acagcgtcat ttaaccctgt aactatactt gctccatttt tagtagcaat atctcctgct
     1561 acaaagatgc ctttaacatt gctttgtttg ttttcatcca ttaaaggcac gcctttatca
     1621 tcaacattaa tcccacattt ttgtaaaaaa tcaagtggag tagaaccacc aatagcataa
     1681 atgattctat cataaatatc gcttgtacca tcggtaaaat ttactttagc tttgccatta
     1741 tcatcttcta cttcattaat gtcaattcct aattttaact ctaccttacc cgaatttcca
     1801 gcttcgtgaa tatctttaag atttatatca tttaatcttg taaattcttt tttacgataa
     1861 caaaggctaa cttgatttga atttgccaaa tccacagcgt attctgctgc tgaatttccg
     1921 ccacctacaa caagaatttt ttcatttccc aaaactgaat tggcattaaa attaatgatt
     1981 tttgttaaag tcataggaag tttgtaatca ggtttattag gtttacccat tctacctata
     2041 gcaacaataa tgtttttaca ctcataaaca cctttagctg tacttactaa aaaaactcca
     2101 ttttcatttt taacgctctc aacttcagaa ccaaattcaa cttctatatt gtgctctttt
     2161 aaagcgtttt gaaaagtttc tatagtgctt tctttggtgc catcttcaaa aggaacatgt
     2221 ccgtgattgg ttccttcgca tcccttataa gctttatcta ctcttttgcc atccttataa
     2281 aattgcatta aagtttgaca aatgttattt gatttttcta gtatcaaaac ttctttgttt
     2341 ttaagcttgg cttcaactgc acagcctatc cctgttggac ctgcacctac tacaattaaa
     2401 tctatttttt tcatttatat ttacctttca attctaaatt tttttgtata atttatcaag
     2461 ttttttgtaa ataaaggatt aaaaatgcga aattt
//
LOCUS       DARATF010000138         2442 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.138, whole genome shotgun sequence.
ACCESSION   DARATF010000138 DARATF010000000
VERSION     DARATF010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.138"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..320
                     /locus_tag="SB502_001709"
     CDS             <1..320
                     /locus_tag="SB502_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEG0435105.1"
                     /translation="KLEKLKNREFVVYHPSWTYFAKRYNLTQIPVEILGKEPKSKDLQ
                     KLITLMKDKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDWENELLKTADAFS
                     HNL"
     gene            333..1187
                     /locus_tag="SB502_001710"
     CDS             333..1187
                     /locus_tag="SB502_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEG0435106.1"
                     /translation="MLFFEISNLNYAYNNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKALQKKEIGYVPQHTLANPNFCPRVLEIILMGLVSKKIFGF
                     YGKKDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEKNCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            1180..1983
                     /locus_tag="SB502_001711"
     CDS             1180..1983
                     /locus_tag="SB502_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEG0435107.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLILLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAIACFGFLMHLIGKFLKR"
     gene            complement(1972..2415)
                     /locus_tag="SB502_001712"
     CDS             complement(1972..2415)
                     /locus_tag="SB502_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEG0435108.1"
                     /translation="MLFPMEKIFEDYVAYMLKKVNSTQDIKVQNNGKYLISKNDENCF
                     MLKPDLYIKNKMILDTKWKIPNDSEDEKKQGIAQSDLYQMFAYACKFKIYDIKLVYPL
                     CEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVFFAPLPF"
BASE COUNT          820 a          349 c          377 g          896 t
ORIGIN      
        1 caaaattaga aaaattaaaa aatagagaat ttgtagttta tcatccttct tggacatatt
       61 ttgcaaaacg ctataatctt acgcaaattc ctgtagaaat tttaggtaag gaaccaaaaa
      121 gcaaagattt gcaaaaactt atcactctaa tgaaagataa aaatttaaaa gtcatttttg
      181 ttcaaaatgg tttccctgaa aatgcagcaa aaacacttgc taaagaatgt gatgcaaaaa
      241 tttacaaaat agatcattta tcttatgatt gggaaaatga gcttttaaaa actgctgatg
      301 ccttttctca taatttataa tcaggttttt tgatgctttt ttttgaaatt tctaatctaa
      361 actacgctta taataatgaa atcatcttaa aaaacatcaa tcttagctat gacaataaag
      421 actttctctc tatcataggt ccaaatggcg caggaaaatc aacactcgta aaacttatct
      481 taggactttt aaaatccaaa aatgaaatcc atttcaaagc tcttcaaaaa aaagaaatag
      541 gctatgttcc tcaacacact ctagccaatc ctaatttttg tccaagagta cttgaaatca
      601 ttcttatggg acttgtaagt aaaaaaattt ttggttttta tgggaaaaaa gataaagaaa
      661 aagctatgca agctttaaaa agcgtaggaa tggaaaaatt ttggaacaaa accattgatt
      721 ctctaagtgg aggacaaagg caacgtgttt ttatcgcgag agccttagct agtgaatgca
      781 aaatgcttat tttagatgaa cctaccgcaa gcgttgataa caagtctgct atacaaattt
      841 ttgaacttct aagctctttg caccaaaaag gcatgggaat tttactcatt tgtcacgata
      901 tcaaccttgt attagcttat agcgataaaa ttgcacattt aaacaaagaa cttttcttgc
      961 atactaacac taaagaaaaa gaaaaaagtt catttttaaa acatttatac gaaaatcact
     1021 ctcatttttg tgatgtagaa atgagtttaa atacttgttt ttgcgatgaa aaaaattgcg
     1081 atagcaaaaa actatgcgaa caagaattta caagaagaaa tttgaaaaaa acagaattta
     1141 aaaaagaaaa tttttgttta aaattttcaa aggaaaataa tgcttgaaat tttaaatttc
     1201 accttttttc aaaacgcttt actaggagcg attttagtca gtatagcttg tgggatcata
     1261 ggcactttgg tgatgataaa tcgccttttt tctatggctg gaggtataac acatggggct
     1321 tttggtggta taggtatagc tttttatttc tctttgccta ttttattaag cacgggaata
     1381 tttactttat ttttggcttt tttagtagct tttttagcta aacactatga acacagaagt
     1441 gatagtatta tcgctgtaat atgggctttt ggaatggctg ttgggattat tttaatcgat
     1501 ttaagcccta gttataacac agatttaatg gcttatcttt ttgggagcat tttggctgta
     1561 ggaacacaag atttatggct tatggctttg gttgatagcg tggtggtgct tttaatttta
     1621 ttattttata gacaatttga agcattaagc tttgatgcgg aatttgcaaa agttcgtggt
     1681 atcaatacaa gtttttttca ttatctttta atcgccctta tggctttttg catagttatt
     1741 tccatacgcc ttgtagggct tattttagtt atggctttac ttagtatccc aagctttatt
     1801 gctgaaaatt ttaccaaaag acttggcttt atcatgattt tggcaagttt tttaagtatg
     1861 attttttgtg ttttaggact tatacttagt tattatctta atctctcaag cggtgcttgc
     1921 atcatagcta tagcttgctt tggtttttta atgcatttga taggcaaatt tttaaaaagg
     1981 taaaggtgca aaaaatactt ggacttttat atctttttgc ccttgttctt taaaatacaa
     2041 atgttcgctc gccttaaaaa caaaaaattt ttctgcgatt tttctttgta aatcttgagt
     2101 tttttcgcat aaaggataca caagtttaat atcataaatt ttaaatttgc aagcataagc
     2161 aaacatttga tacaaatcgc tttgtgctat accctgtttt ttctcatctt cactatcatt
     2221 tggaattttc catttggtat ctaagatcat tttatttttt atatataaat caggctttaa
     2281 catgaaacaa ttttcatcat tttttgagat taaatacttt ccattgtttt ggactttaat
     2341 atcttgagtt gaatttactt tttttagcat ataagctaca taatcttcaa aaattttctc
     2401 cataggaaaa agcaaagcaa aagcttcatt tttaccatga ta
//
LOCUS       DARATF010000139         2392 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.139, whole genome shotgun sequence.
ACCESSION   DARATF010000139 DARATF010000000
VERSION     DARATF010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.139"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..349)
                     /locus_tag="SB502_001713"
     CDS             complement(<1..349)
                     /locus_tag="SB502_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HEG0435109.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKIAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIF"
     gene            complement(361..1449)
                     /locus_tag="SB502_001714"
     CDS             complement(361..1449)
                     /locus_tag="SB502_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HEG0435110.1"
                     /translation="MPADLNDYFNKKNRNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(1461..2375)
                     /gene="ilvE"
                     /locus_tag="SB502_001715"
     CDS             complement(1461..2375)
                     /gene="ilvE"
                     /locus_tag="SB502_001715"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEG0435111.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELENAQIELLKANNFKSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQNTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     PVTKKLQDAYFNVVYGRNEKYASMLTYI"
BASE COUNT          728 a          406 c          363 g          895 t
ORIGIN      
        1 caaaaatttt agctgtaatt ttacattctt taaaattatt ttttgaatta tttgtaatgt
       61 taaaatcaac aattaaatca tttgagcttt gtatcatttt ttgatctgta atagcgattt
      121 ttcgagttct tacttcattg tctattagtt tatacccata gatataaact aaaaaacaaa
      181 taataatatc aaatgcaata ataaaaagtg ctgctatagg tctatggcgt aaaaatacgc
      241 aaagaagtaa aacacaagtg aagagaaaaa aaactaataa aatcagcata taatctacta
      301 aatataaatg agtagtgtaa aaaagcacga tttctcttag tttctccact tgcgtatcct
      361 ttagttcatg ttggcagcac tttgcttttt agcatcttta gtatcaaccc aaatgtttgg
      421 cactgctcca cctggagtta agaaaatttt agcatcttga ttgactttta aggcttcatt
      481 aaattctttt tgagtttcaa tttgttttaa atttagcaaa ggggtgttta agctgtttgc
      541 gatttcttta ttagaataag cttgtgcatc tgcttctatc ttaacagcca tagctttacc
      601 tttggcgctg attatggttg catttgcttc cccttcagct aaagcagctt tttttaaggc
      661 ttcttgatta gctctttcta cttcatattt agttctttca gcctcttgtt ttgcaatttg
      721 cacgcgttcg atttgttctt ttacttttga aggtaaaata atttctctaa gttgtacagc
      781 gcgaagttct acaggttcat ttggttgggc ttctatggtt tttcttatac cttcttctat
      841 ttgagcggct attgtattac gattagtagg aagttcttcg gctgtatatt ttcctacaac
      901 acttcgcact acatcacgaa caactggatc gataatttta ttttcccaat ttaagctcca
      961 agtagctata gtttgaggaa cttgcagagg atttaagcgg tattgtactg taacatcaat
     1021 agatacaggc aatccacgag agtcaagtac agaaatgcta tttttattaa taacacctga
     1081 acctgaagat aaattttcat tacttccctc tatagaagca tagttgattt gtcttactct
     1141 agtatcgatt atggttattt tttgtacaaa aggtaagaaa aagtgaagtc ctggttctaa
     1201 tggatttggg tcatatttac ctgttgttga tttaatcccc atttccccag aatttatcac
     1261 cataaaaggt tttgcaacga ttaaaaataa gataataata atcaccccat aaacaaatgg
     1321 agagaatttc ccaaaacctt taaaattaaa ttctggtgct ttgaaattga aattttgacg
     1381 gttgttgttt ccgttattgt tagaatttct atttttttta ttgaaataat catttaaatc
     1441 agctggcatt tatttccttt ttaaatataa gttagcatag atgcgtattt ttcattgcgt
     1501 ccataaacta cattaaaata agcatcttga agttttttgg ttacaggtcc tcttaaacca
     1561 tttcctatta ttcttgcatc aatattgtta ataggtgtga tttcagcggc tgttccggta
     1621 aaaaatgctt catcagcagt ataaacttca tctcttgaaa ttctttggcg aagcacagtg
     1681 ataccaagat catgagctat tttaagcact gtattttgag taatgctttt taaagaaaaa
     1741 tcatttggag gtgtgattaa aaccccgtct tttacaataa agaaacattc tcctgttcct
     1801 tctgcgataa aaccttcttc atcaagcatt aaagcttctt catagcctgc ttcaatagct
     1861 tcaaattttg caatttgaga gttaagataa tttgcacttg ctttagcttt tcccatgcat
     1921 gatttaacac tatttcttgc aaaagacgaa atttttactt ttatgccttt ttctaaacct
     1981 tcttctccaa ggtaagcacc ccattcccaa gctgcaattc caactcttac aggagctttt
     2041 atatgataaa gtcccataac tccatcgcct aagaaaatca aagggcggat atagacattg
     2101 cttttaaagt tgtttgcttt taagagttca atttgtgcat tttcaagctc tttttgagaa
     2161 aaaggacaat ttaaaagagt aatttttgca gactctaaaa gtcttttggt gtgatcttca
     2221 agtctgaaaa ttgctaagcc tttatctgtt ttataggctc tagttccttc aaaaacagca
     2281 ttgccataat gcaaagaatg ggttaaaaag tgcaaagttg catctttaaa atcaactaat
     2341 tttccatcca tccaaatttt atctgctgag atcatttttt accttttata gt
//
LOCUS       DARATF010000140         2391 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.140, whole genome shotgun sequence.
ACCESSION   DARATF010000140 DARATF010000000
VERSION     DARATF010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.140"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..1846
                     /locus_tag="SB502_001716"
     CDS             <1..1846
                     /locus_tag="SB502_001716"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEG0435112.1"
                     /translation="DYEYKKVDKLFITSSFVKIEFLSKDMLSDFINGQFLYQIEDMFA
                     IDCFNYCKNGSILTKEQQEYVSSIDKMYSGINIKELNMTSKFKGVLKEDYETPDLIKM
                     DAKFIYENIEKPLSSKIKFVLNENKFMIESKLSNETHKYFYFKNSFTRETFNMVKNSQ
                     FLLQGIFSNEDFKTVFEFQDENQQKISHNINKAGDIQTLAIPKECKFIRFGLRIQGSG
                     KFQIDNLILDFLNPQPFALIAKSKKLVLTKQYPSYDDLYKYGFLHSRIKAYKEKGILV
                     DVFKLSNTQRYECREFEGIDVMTASNDVLEETLISGQYDHILVHFLDKNMWSVLKKFI
                     DKIKITVWIHGAEIQIWQRREFEFERYSEIEIQRQKKLSDQRVKFWTEIFNANYKNIH
                     FVFVSEYFKNESLGDLKVALEPSKYTIIHNPIDTSMFDYLPKSPDDRKKILSIRPFTS
                     RKYANDLSIKAILELSKREFFKELEFFIAGDGVLFDELTNNLKSFKNITLYKGFLTQK
                     EISNLHKKYGIFLNPTRMDAQGVSRDEAMSSGLVPITNNIAAIPEFIDGECGILVAPE
                     NAKLLADAIEFLYKNPNEFMKLSINAANRVRNQCDKNTIISKELDIIL"
     gene            1843..2088
                     /locus_tag="SB502_001717"
     CDS             1843..2088
                     /locus_tag="SB502_001717"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435113.1"
                     /translation="MKKICIFGSCVSRDIIEYDMKNNFELIDYYARSSFASLASSAMI
                     EQSVLDNIQSSFQKRMVLRDMDKSFIRKLKKMILIVY"
BASE COUNT          939 a          234 c          377 g          841 t
ORIGIN      
        1 agattatgaa tataaaaaag tagataaact ttttattact tcatcttttg taaaaataga
       61 atttcttagt aaagatatgt tatctgattt tatcaatggg caatttttat atcaaatcga
      121 agatatgttt gctattgatt gttttaatta ttgtaaaaat ggttctattc ttacgaaaga
      181 acagcaagaa tatgtatcta gtatagataa aatgtattct gggataaaca ttaaagaatt
      241 aaatatgaca tcaaaattca aaggggtatt gaaagaggat tatgaaactc ctgatttgat
      301 aaaaatggat gctaaattta tatatgaaaa tatagaaaaa ccgttgagtt ctaaaattaa
      361 atttgtatta aatgaaaaca aatttatgat agagtcaaag ctttctaatg aaacgcataa
      421 atatttttat tttaaaaatt cttttacaag agaaactttt aacatggtaa aaaattcaca
      481 gtttctactt caaggtattt tttcaaatga agattttaaa acagtatttg aatttcaaga
      541 tgaaaaccaa caaaaaattt ctcataatat taacaaggct ggagatattc aaactttggc
      601 catacctaaa gagtgcaaat ttatccgttt tggtctacgc atacagggca gcggcaaatt
      661 tcaaatagat aatttaattt tagatttttt aaatccacaa ccttttgcac ttattgctaa
      721 aagtaaaaaa ttggtcttaa ctaaacaata tccttcttat gatgatttat ataaatatgg
      781 ttttttacat tcaaggataa aagcatacaa agaaaaaggt atcttagttg atgtatttaa
      841 gcttagcaac acgcaaagat atgaatgcag agaatttgaa ggtattgatg tgatgacagc
      901 ctctaatgat gttttagaag aaactttaat aagtggacaa tatgatcata tattagtaca
      961 ttttttagat aaaaatatgt ggagtgtctt aaagaaattt atagataaaa ttaaaattac
     1021 agtttggatt catggtgctg aaattcaaat ttggcaaaga agagaatttg aatttgaaag
     1081 atatagtgaa attgagattc aaaggcaaaa aaaactttct gatcagagag taaaattttg
     1141 gacagaaatt tttaatgcaa attataaaaa catacatttt gtttttgtaa gcgaatattt
     1201 taaaaatgaa agtttgggtg atttaaaagt agctttagaa cctagtaagt atactattat
     1261 acataaccca atagatactt caatgtttga ctatttacct aaatctcctg atgatagaaa
     1321 aaaaattctt tctatccgtc ctttcacctc tagaaaatat gcgaatgatt taagcatcaa
     1381 ggctattttg gagcttagta agagagaatt ttttaaagaa ttagaatttt ttatagccgg
     1441 tgatggggta ttatttgatg aattaactaa taatttaaaa tcttttaaaa atattacttt
     1501 gtataaagga tttttaaccc aaaaagaaat atcaaattta cataaaaagt atggtatatt
     1561 tttaaatcct acaagaatgg atgctcaagg tgtctctaga gatgaggcta tgtcaagtgg
     1621 tttggttccg atcactaaca acattgcagc aatcccagaa tttatagacg gtgaatgtgg
     1681 aattttagtt gctccagaaa atgcaaagtt gttagctgat gcaattgaat ttttatataa
     1741 aaatccaaat gaatttatga aattatctat caatgctgca aatagagtaa gaaatcaatg
     1801 tgataaaaat acgattatat ctaaagaatt ggatataata ttatgaaaaa aatttgtatt
     1861 tttggatcgt gtgttagtag ggatataatt gaatatgata tgaaaaataa ttttgaatta
     1921 atcgattatt atgctagaag ttcatttgct tctttggctt caagtgctat gatagagcag
     1981 agtgttcttg ataatataca gtcatctttt caaaaacgca tggtgttacg tgatatggat
     2041 aaatctttta taagaaagtt aaaaaaaatg attttgattg tttattgatc gattttattg
     2101 atgatagatt tcatttttat aaaatattaa aaaatagcat agttacagtc tcaaatgagt
     2161 ataaaaaagc aaaaggaaag ttatatagtt ccaatatgat ttattctaag agtcaagagc
     2221 atattgattt gtggaggaaa ggtattgaaa aatatatatg atttatatat gattcaagat
     2281 aaaattgttt taaataaggt atattggtca gatgtttttt ataatggaaa taaattttca
     2341 attagtcaag aagaattgat tagcaataat aattttttaa aagaacgata t
//
LOCUS       DARATF010000141         2219 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.141, whole genome shotgun sequence.
ACCESSION   DARATF010000141 DARATF010000000
VERSION     DARATF010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.141"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            52..294
                     /locus_tag="SB502_001718"
     CDS             52..294
                     /locus_tag="SB502_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435114.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            291..1592
                     /gene="miaB"
                     /locus_tag="SB502_001719"
     CDS             291..1592
                     /gene="miaB"
                     /locus_tag="SB502_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEG0435115.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFEETMDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEETASRRLSTLQNRHSEILDEIVKKQENKTFKVLFEELRAGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            1576..2205
                     /locus_tag="SB502_001720"
     CDS             1576..2205
                     /locus_tag="SB502_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEG0435116.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKAGVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWKFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMKQFDKISLADQFKE"
BASE COUNT          849 a          306 c          387 g          677 t
ORIGIN      
        1 taaaatttgc taaaattata gattaaaatg aaaattctta aggatttagc tatggaatta
       61 aaattggcaa gaactttgat taatgaaaaa cctaaaaata ttagcctaga aaaaatcgaa
      121 gaggctatag aaaaagaagg acaaaagttt ttttattttg ataaagataa tacacacaaa
      181 caacttattg cccttgtaaa tcattttgaa aaaaaaggag taagcattta tcatagaacc
      241 gtaaaatacg gacttgatga taatgatttt atgtatgagg tacatattct ttgagtgcta
      301 aaaaactttt tatccaaact ttaggttgtg cgatgaatgt cagagattct gagcatatga
      361 tcgcagaatt aacacaaaaa gaaaattacg cactaacaga agatatcaaa gaagcagatc
      421 ttattcttat caatacctgt tcagtgcgtg aaaaacctgt gcataaactt ttctcagaag
      481 taggtggttt tgaaaaagtt aaaaaagaag gtgctaaaat aggagtttgt ggatgtactg
      541 catcacattt aggaaatgaa attttcaaac gtgctcctta tgtggatttt gttctaggag
      601 caagaaatat ttccaaaatc actcaagcta taaaaactcc aaaatttatg ggcgtggaca
      661 tagactatga tgaaagtgaa tttgcttttg cagattttag aaatagtatt tataaatcct
      721 atattaatat ctccataggt tgtgacaaac actgcactta ttgtatagtg ccacatacta
      781 gaggagatga aatttccata ccttttaaca tcatctacaa agaagctcaa aaagctattg
      841 aaaaaggcgc taaagagatt ttcttgctag gacaaaatgt caataactat ggcaaaagat
      901 ttagaaacga acataaaaaa atggactttt cagatctttt agaagaactt agcactatag
      961 aaggtttgga acgcattcgc tttacaagtc cacatccttt gcacatggat gataaatttt
     1021 tagaagtttt tgccaataat ccaaaagttt gcaaatccat gcacatgcct ttacaaagcg
     1081 gctcaagtga aattttaaaa gctatgaagc gtggctatac taaagaatgg tatttaaata
     1141 gagctttaaa acttagagaa ctttgtccaa atgttagcat ttctacagac attattgtag
     1201 cttttccagg ggaaagtgaa aaagattttg aagaaactat ggatgttttg gaaaaagtgc
     1261 gttttgaaca aattttttct tttaaatact ccaaacgccc tttaacaaaa gccgcaacca
     1321 tgcctaatca aatcgatgaa gaaacagctt caagaagact tagcacctta caaaatcgtc
     1381 atagtgaaat tttagatgaa attgtaaaaa aacaagaaaa taaaactttt aaagttttat
     1441 ttgaagaatt aagagcaggc aatagcattg ctggaagaac agataataat tttttagttc
     1501 aagttgaagg tagcgaagaa cttttagggc aatttaaaga agtaaaaata actaatgcaa
     1561 agcgtatggt tttatatggg gaaatcgttt aaaatccatt gcttaacata tataattttc
     1621 atcttgcaat ggcttatttt tttaagctgt aaaaagcact ataaaggtga aaaagttgac
     1681 cgtaaagctg gtgtgatact tttttggcat ggaaaattag cactcatgcc ttttgcgttt
     1741 agacattata gacaaaaaaa taaaaaagcc tatgtcatga tctcccacca taaagatgga
     1801 gaacaaattg caaaaatcat caagcttttc ggtcttgata ctgtaagagg aagcacttca
     1861 aggggtgcta gcagtgcact tagagctgca tttaaagttt tagaacaaaa tgacgatata
     1921 gttatcacgc ccgatggtcc acgagggcct tatcatagta tttcagatgg ttctatcatt
     1981 ttggctcaaa aaaaagaact aaagataaga attttaaact atgaagcaaa tcgtttttgg
     2041 aaatttaaaa gttgggataa gatgatcttg ccaaaacctt ttagtaagat tacttatagt
     2101 ctaagtgaac ctttggatat tttatcttta gataaagaaa aagctaaaga atttctaatg
     2161 aaacaatttg ataaaattag cttagctgat caatttaagg aatgaaatgt tatttttac
//
LOCUS       DARATF010000142         2206 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.142, whole genome shotgun sequence.
ACCESSION   DARATF010000142 DARATF010000000
VERSION     DARATF010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.142"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..604)
                     /locus_tag="SB502_001721"
     CDS             complement(<1..604)
                     /locus_tag="SB502_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435117.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFASKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKESDFIKALELCTFNITDEEKKKKLLEF"
     gene            674..>2206
                     /locus_tag="SB502_001722"
     CDS             674..>2206
                     /locus_tag="SB502_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEG0435118.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPTKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHNILDEGIELGEFYIRRLISTHSIISALDKQKALEAIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICK"
BASE COUNT          839 a          324 c          309 g          734 t
ORIGIN      
        1 taaattctaa aagttttttc tttttttctt catcagtaat attaaaagta caaagttcta
       61 aagctttgat aaaatcactc tctttttgta catcttcatt aagctcaaaa agacattcta
      121 aaagttctaa attttcttta taagaacgaa gttttaaata aacaattttt aaaagtttta
      181 aggcttgtat atttcttgga cgcagtttta aagcttgtaa taaaacttct tttgcacgct
      241 ctaaaaatcc tgctttaaaa taaacttttg ctaaagaaag gaaaataaat tctctttctt
      301 gtttatcttt acatttttca agagcaatca aataaatttg agttgctttt tcaaattccc
      361 cgcttttagt aaaaatttca gccaaaaaac ttaaatttcc aaaactcaag ctactatttc
      421 ttaataactc tttatgagcg ttatccattt caaatttttt tataaatttt tcaagctttt
      481 gttcttcatc tttgctagca aatattttcc aaatataatt tgcaacagct acaacaaata
      541 ctaaaatggt taaaattata agccctacta aagggtctct gtattctaca aagaaaaaat
      601 ccatagtctc gctctaaaaa ttttatgcca aattatagcc aaatctttgt ataattttaa
      661 caaggtttgt aaaatgataa ctaaagaaag tatagaaaat ttatcccaaa gacttaatat
      721 tgttgatatt atagaaaatt atattgaagt aaaaaaacaa ggctctagtt ttgtgtgtat
      781 ctgtcctttc catgcagata aaaacccgtc tatgcatatc aatcctacca aaggttttta
      841 tcattgtttt gcttgcaaag ctggtggaga tgcttttaaa tttgtaatgg attatgaaaa
      901 attaagtttt gccgatgcag ttgaaaaagt tgcaagcctt agtaatttta ctttgagtta
      961 tacaaaagaa aaacaagaaa ataaaaaaga gctaaagtct atactaccaa gcttaaatgc
     1021 gtattttaaa gataatctca aacaccacaa agaagtttta acctatcttt accagagagc
     1081 tttaaatgac aaagatatag ccaaattcga attaggtttt gcaggagcaa gtgaagatag
     1141 tataagatta ttgcaaaatc aaaaaattcc tttagaagat gctatgagtg ttggagcttt
     1201 aaaaaaagat gaaaataatg aattttacgc aagttttata tggcgtatca cctttccaat
     1261 ctacgatcat aaagacttat tggtagggtt tggaggacgc actttaaatc ccaatgtacc
     1321 ggcaaagtat gtaaattcac cccaaaatat actttttgat aaaagtagaa ttttttatgc
     1381 ttttaacatc gctaaagaaa atatagccaa aaaaaaagaa ataatagtat gtgaaggcta
     1441 catggatgca atagcttttc acaaagcagg gtttaacaat gctgtagcag ttcttggaac
     1501 agcattaacc gaacatcatc tacccttaat ccgccgttat gatgcaaaag tgattttatg
     1561 ttttgacaat gatgaagcag gattaaaagc tgcgacacga tctgcatttt tattaagcac
     1621 aaacaaaata gacggtaaag tggcaatttt gcaaggcgga aaagatcctg ctgagctcgt
     1681 agcaaaaaat gaaagcacaa aactccataa tatactcgat gaaggaatag agcttggtga
     1741 attttatatc agacgcttaa tatccactca ttccataatt tctgctcttg ataaacaaaa
     1801 agctttagaa gctatacaaa aattcacctt taatcttgaa cctttagtgg caaattctta
     1861 cactagtcta gtttcaaatt tattaaaagt ggatgaaaaa tttattgtct tatcacaaaa
     1921 ttcaaaaaaa accatacaaa cccctttaat ttctcaaaat aaatacaatt ttcctaaaga
     1981 aaaaattcac attgcagaat tagaacttat agctttttta aaacagcatc cagatatatg
     2041 taacgatttt aagcaaatta gtgatagtgt ttgttttaaa cataagattt tattggataa
     2101 aattttagaa aaaaaaggtt atgaagatag tgatattaga gaatttgaaa gtaaaaatat
     2161 tcgaaaaaat ttaaactata gcgaattctt gttaggtatt tgcaag
//
LOCUS       DARATF010000143         2200 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.143, whole genome shotgun sequence.
ACCESSION   DARATF010000143 DARATF010000000
VERSION     DARATF010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.143"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            19..282
                     /gene="rpsT"
                     /locus_tag="SB502_001723"
     CDS             19..282
                     /gene="rpsT"
                     /locus_tag="SB502_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEG0435119.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGDK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            301..1368
                     /gene="prfA"
                     /locus_tag="SB502_001724"
     CDS             301..1368
                     /gene="prfA"
                     /locus_tag="SB502_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEG0435120.1"
                     /translation="MLASKLDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGAGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(1382..2137)
                     /locus_tag="SB502_001725"
     CDS             complement(1382..2137)
                     /locus_tag="SB502_001725"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HEG0435121.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDAIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVIHVGASGNPHKFLHKH"
BASE COUNT          809 a          369 c          346 g          676 t
ORIGIN      
        1 caaaaaagga aaatataaat ggcaaaccat aaatctgctg aaaaaagagc aagacaaact
       61 attaaaaaaa cagaaagaaa tagattctat agaacaagac ttaaaaatat aactaaagcc
      121 gtaagagaag ctgcagcaaa tggagataaa aatgctgcta atgaagcttt aaaagtagct
      181 aataaaagca ttcatgctat ggtaagtcgc ggtttcatta aaaaacaaac tgcttctcgc
      241 cgtgtaagcc gcttagccct tttagtaaat aaaatcgcat aattttctat atagttttta
      301 atgttagcta gcaaactaga tcctttttta aaacgctttg aagagttaaa ttctcttctt
      361 agcagttctg atataatcaa cgatatcagt aaaatgacta cactctctaa agaacaaaaa
      421 aatttagaac ctatcgtttt aaaagctaaa gagtatttaa aaactttaga caatatagaa
      481 gaaaataaag ctttgctaaa cgatccagaa cttggggaac ttgcgaaaga agaactaaaa
      541 actttagaag aattaaaacc aaagcttgaa gaagagatta aaattttact tcttcctaag
      601 gatcccaatg atgaaagaaa tatttttctt gaaattcgcg caggcgcagg tggcgatgag
      661 gcatctttat ttgtaggaga tcttgtaaaa gcttatgcaa gatatgctga aaatcgtggc
      721 tataaacttg agattgtaag ttctagtgaa ggaagtgtag gtggatttaa agaaatcatc
      781 atgcttgtta aaggaacagg agcttattca agacttaaat atgaaggtgg aacgcaccgt
      841 gttcaaagag ttcctcaaac agaatcccaa ggacgcgtgc atacttctgc tatcaccgtg
      901 gcagtaatgc cagaagttga tgatatagaa atcgaaatca atccaaacga tcttaaagtt
      961 gatgttatgc gatcttcagg acatggtgga caaagtgtaa atactactga ttcagctgtt
     1021 cgtatcactc atatccctac aggtatagtt gtagtcaatc aagatggaaa aagccaacac
     1081 aaaaataaag aaagtgcgat gaaagtccta aaagcaaggc tttatgaaat gcaagagagt
     1141 gaaagactgg caaaagaaag tgaagcaaga aaatcacaag taggaagcgg agatagaagt
     1201 gaacgcattc gcacttacaa ttttccacaa aatcgtatca gcgatcatag aataaatctt
     1261 actttatatc gcttagatgc cattatgcaa gatgggcttt ttgatgaaat catagaacct
     1321 ttaatcactc atcatcaagc ccaagcttta caagaacaaa atttataaga ttttatataa
     1381 attaatgctt atgtaggaat ttatgtggat ttccactagc acctacatgt ataacatttc
     1441 cattttctat atcataagct tggccaaaac cttttacaaa gcgtcctttt ttaaattcaa
     1501 gctttactag atgaaaatca agcatcttgc gtatagtttt aatgcctcct tctcctccgg
     1561 tttgtttttc aaactcatca taaatttgat caaatctttc acctctctct aaaaagcttg
     1621 catttactct atagcgcaat cttttgcgaa gtatcacaga agcggcttta ctctcatcct
     1681 ctaaaaacat tatttctata ttgtttggat ttactttgat gttgttaaaa tgttcgctta
     1741 cttcacttat ataaatataa tttccccatt gtgtgcttac aaaaggtgca tacgagcaaa
     1801 caacttctcc atttgcattt aaagttgcca aagctacaga attaaaactt agcataaatt
     1861 catttaattc tttttctacg ccactaaaat tttgctcgct ctttgcactc atgcaaaggg
     1921 atattatagc atctttaatc gtgttttcat cggctttttt aggaaattcc actcgtaaat
     1981 tttctttatc attgtaaaca agatctaagc cattaaaatc aacacttttt agaaaaacat
     2041 cttgtacttg ctcaatacca ccaaattttt tacaaagatc gactaaattt gatttatgat
     2101 gatcattcat atgagaaata atgctttcaa aattcatttt tatcctttct tgattttaaa
     2161 ataaaatatt aaaaaaaatg gtatcaatta tcaaattaaa
//
LOCUS       DARATF010000144         2187 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.144, whole genome shotgun sequence.
ACCESSION   DARATF010000144 DARATF010000000
VERSION     DARATF010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.144"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            9..725
                     /locus_tag="SB502_001726"
     CDS             9..725
                     /locus_tag="SB502_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0435122.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLKISFQDKSIIDI
                     GCGTGVWTLHLAKEAKEILALDSANTMLEILQEDAKTHTISNLKTLNLDFESFYKNNN
                     AKFDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKGF
                     YKKDLENYLLEKNIFFHKIVFDETRKVQRTKEEAIENALWHLSMNKITTSKEAVSSFV
                     ENDIIETIESKIKLLIINNL"
     gene            781..1002
                     /locus_tag="SB502_001727"
     CDS             781..1002
                     /locus_tag="SB502_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435123.1"
                     /translation="MVKNLIIKFGRLILDAIAAISFVVALLYSLFMMFSIGFLAGLLS
                     LIVSFIALFLSFFVIYLVIDIRDALVNKA"
     gene            complement(1027..2034)
                     /gene="pyrC"
                     /locus_tag="SB502_001728"
     CDS             complement(1027..2034)
                     /gene="pyrC"
                     /locus_tag="SB502_001728"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEG0435124.1"
                     /translation="MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLC
                     NLEDLKAYKMRIIKACKDENFTPLMTLFFENYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPRDTKECCGCAAGVFSAPVILPVLAELFRQNSSEE
                     NLQKFLSDNACKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLK
                     H"
     gene            complement(2043..>2187)
                     /locus_tag="SB502_001729"
     CDS             complement(2043..>2187)
                     /locus_tag="SB502_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEG0435125.1"
                     /translation="NGFIMIKISELEEKLNQSKPTIIATFKFLEEKKLFKRLKNGFYQ
                     LKI"
BASE COUNT          780 a          320 c          295 g          792 t
ORIGIN      
        1 gaaaatatat gaatttatgg gataaaaagg ccaaaactta cgcaagatat caaaacactt
       61 taaacaccat acaaaagcaa acttttgaat atttacaaaa tttaaagatt tcctttcaag
      121 ataaaagtat tatagatata ggatgtggaa ctggggtttg gactttacac ttagctaaag
      181 aagctaaaga aattttagcc ctagatagtg caaatactat gcttgaaatt ttacaagaag
      241 atgcaaaaac tcataccata tcaaatttaa aaaccctgaa tttagacttt gaaagctttt
      301 ataaaaataa taacgcaaaa tttgacttag cctttttaag tatgtctcct gctttacaaa
      361 atgaaaaaga ttatacaaat ttcttaaatc tagccaaaat aaaaatttat cttggttggg
      421 ctgattatag aaaaagtgat tttttagatc cgatttttaa atattttaat actgaattta
      481 aaggttttta taaaaaagat ttagaaaatt atttactaga aaaaaatata ttttttcata
      541 agattgtttt tgatgaaaca cgcaaagtcc aaagaacaaa agaagaggct atagaaaatg
      601 ctctatggca tttaagcatg aacaaaatca caacttctaa agaagctgta agttcttttg
      661 ttgaaaatga tattattgaa actatagaat ctaaaataaa acttttaatt ataaataact
      721 tataaaaata ttaagctgat atttattaca atttcactca ttatttcaaa ggagttttta
      781 atggttaaaa atttaatcat caaatttgga cgcttgattc ttgatgcaat tgcagcgata
      841 agttttgttg tagctttgct ttattctctt tttatgatgt ttagcattgg atttttagct
      901 ggtttattat cgctgatagt cagttttatt gctttatttt taagtttttt tgtaatctat
      961 cttgttatag atatcagaga tgctcttgta aataaagctt aaattttcca cctttaaggt
     1021 gggaaatcaa tgttttaatt gaaattttaa aatttctcca gccatataag gcacgacttg
     1081 attgtattta tcttcataaa catttggcac ttgccattct ttttcttcta aagttaaaat
     1141 tttatcttct ttaaatttta aatcataaat tttacaagca ttatcgctta aaaatttttg
     1201 caaattttct tcagaactat tttgcctaaa taattcagcc aacacaggta aaatcactgg
     1261 ggcgctaaat acacctgcgg cacaaccaca acactcttta gtatctcttg ggtgaggcgc
     1321 actatcactt ccaaacataa ctttttcata accactaaaa gcaagttcgc aaagggcttc
     1381 tttatcttcg taacgcttgg ctataggctt acaaaaaaga tgaggattca ttttacctcc
     1441 gataacatca tctaaagtga tgattaaatg atgtaaagtg attgtcgcgt ataaattttc
     1501 ataatctttt aaaagttcac ataaagtttt agtggtaata tgctccataa caatcttaag
     1561 tcgtggaaaa tgtttggcta atttttcata aattttagca aaattacttt ccctgtccat
     1621 tacaaaatca ttggtttctc catgcactag caaaggaata tttaaatcac tcatagcctc
     1681 taaagtaggt tttaaatact ctatatcaaa acttgaaact ccgccatttg aatttgttgt
     1741 aattcctgct ggataaagct taatgccaaa aatttcatct ttagcactgt aaagaaattt
     1801 ctcatcataa ttttcaaaaa aaagtgtcat taaaggagtg aaattttcat ctttacaagc
     1861 cttaatgata cgcattttat aagcttttag atcttctaaa ttgcaaagtg gagggattaa
     1921 atttggcata atcacagctg cacaaaaatc tcttgcactc aaaggtgcaa taagttctaa
     1981 catttgatta tctcttaaat gcaaatgcat atctaaagga tttttaagtt tcattttatc
     2041 tcctatattt ttagctgata aaatccattt ttaagacgct taaaaagctt tttttcttct
     2101 aaaaatttaa aagtagcgat gatagtgggc ttgctttggt ttaatttttc ttcaagctca
     2161 ctgattttaa tcataataaa accattt
//
LOCUS       DARATF010000145         2186 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.145, whole genome shotgun sequence.
ACCESSION   DARATF010000145 DARATF010000000
VERSION     DARATF010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.145"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..254
                     /locus_tag="SB502_001730"
     CDS             <1..254
                     /locus_tag="SB502_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0435126.1"
                     /translation="GSGGIYLEDIYIRENFRKKGYGKAVFKFLGEICKKENLKRLDWV
                     CLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            251..859
                     /locus_tag="SB502_001731"
     CDS             251..859
                     /locus_tag="SB502_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEG0435127.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEVFAYKNFFIMPSYDLDFIEKNPSYEKNFIQDLKKIKGFL"
     gene            856..2046
                     /locus_tag="SB502_001732"
     CDS             856..2046
                     /locus_tag="SB502_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435128.1"
                     /translation="MKKIFLIFFLSCFLLNAKEQKLVDVKPVENFYPKLSVQECNTNC
                     LFDLLESRLYLSFLSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEK
                     TIKSYSNTIINSSIAYLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGF
                     TLKGANELKNYSGNMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNANIAI
                     FSDGSALSSNLNSRILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNAPLIKT
                     ALASSQLRIYNIHPYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNE
                     IFNQSIDYNWIAYATSIGVDYFYTEFLNKKSENLFDEKIKNSQVDYKVRLMQGKQASF
                     EELK"
     gene            complement(2038..>2186)
                     /locus_tag="SB502_001733"
     CDS             complement(2038..>2186)
                     /locus_tag="SB502_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEG0435129.1"
                     /translation="KNASVEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLF
                     EELF"
BASE COUNT          836 a          294 c          304 g          752 t
ORIGIN      
        1 ggggcagcgg tggaatttat cttgaagata tttatatacg agaaaatttt cgtaaaaaag
       61 gttatggaaa agctgtgttt aaatttttag gagaaatttg caaaaaagaa aatttaaaaa
      121 gactcgactg ggtttgctta aatgataata ttttaggtat taatttttat gaaagtttaa
      181 acgctaaaca tcttaaacaa tggagaaatt atcgtctaag tggagaaaat ttagaaaaat
      241 tgtgtgattt atgataagaa gtctttatta tttaaaagct atgggattta actttgttga
      301 tacacataca aaccactttg aacaagtaca aaattttcaa gaattaaaac aacttgtttc
      361 atcttgcacc ttatgccaat tttccaaaac aagaaaattt agtcttatgg aacctaagat
      421 aaaaaatgtc aaattgctaa ttcttgatgt ttttgggcaa aagagtgaaa atgaaagcgg
      481 aattttactt aattcaaaaa aaggtgaaaa attaaaacac tatatttatc aaattttagg
      541 gctttgcgat gaagattttt atttttctta tttatttaaa tgtttttgta atggaaaatt
      601 tgatgatttt tcgctacaat cttgcttacc atttttctgg aacgaactaa aactgattca
      661 acctgctttt ttgctttgtc taggagaata cacatttaaa agcttgggat ttaaagatta
      721 tcacatttta aaaggtgaag tttttgctta taaaaatttt ttcataatgc caagttatga
      781 tttagatttt atagaaaaaa atccaagtta tgaaaaaaat ttcatacaag atttaaaaaa
      841 aattaaagga tttttatgaa aaaaatattt ttaatatttt tcttatcttg ctttttgctt
      901 aatgcaaaag agcaaaaatt agtcgatgta aaacccgttg aaaattttta tcctaaatta
      961 agcgttcaag aatgcaacac aaattgtctt tttgatcttt tagaatcaag attatatctt
     1021 agttttttaa gtgaatttgc agatcaaaac gatcaatttt tatctaatgt ttatgcaaaa
     1081 ttattaaatt ccattactga ttttgaaaaa aatgttcaaa aaattacttc tgtcaaactt
     1141 gcgataatta tcccagaaaa aaccataaaa agctactcaa atactataat aaattcaagc
     1201 atagcctatc ttttaagaca aagagctgaa atcaaagtaa aagttttttt aaccggcaca
     1261 gaagatagtg ataaaattcg agccgcgctt gatgcagcac aagctcaagg atatcagtat
     1321 gccatagctg gatttacctt aaaaggtgct aatgagttga aaaattactc aggaaatatg
     1381 aaaattttca taccgactat ccataaaaac aacatacaaa tttcaaatca aaatattatt
     1441 tttggaagta ttgactatga tgctcaaatt gccacacttt taagcaaatc aaatgctaat
     1501 atcgcaatat ttagcgatgg ctctgcctta tcaagcaatc taaattcaag aattcttgct
     1561 caaaataata atgctagaat atataccata gaaggcgaga agcttgattt cagcagactt
     1621 ttaagatcac aaggtggagt taataatgcc tcaatatttt ttaacgctcc attgatcaaa
     1681 acagctctag caagttctca actaagaatt tataacattc atccttatgt gcttttatcc
     1741 actcaaatca actataatcc aacattttta agtttaacac aacaaggaga tagagaaaat
     1801 tttatcattg ctaattctat caataaccac gatgataact tagtctatct taatgaaatt
     1861 tttaatcaaa gtatagatta taactggatt gcttatgcta ctagcatagg agttgattac
     1921 ttttataccg aattcctaaa taaaaaaagc gaaaatttat ttgatgagaa aatcaaaaat
     1981 tctcaagttg attacaaagt gcgtcttatg caaggtaagc aagcaagctt tgaagaatta
     2041 aaataattct tcaaagagct tttttaactg catatccatt ctagctggtt tttcgttttt
     2101 aataaaagct aaagttaatt ccattttaaa aaacaaaatt tcatctttat aaatttcttg
     2161 taaaatttcc acagaagcat ttttga
//
LOCUS       DARATF010000146         2170 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.146, whole genome shotgun sequence.
ACCESSION   DARATF010000146 DARATF010000000
VERSION     DARATF010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.146"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            130..1626
                     /locus_tag="SB502_001734"
     CDS             130..1626
                     /locus_tag="SB502_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435130.1"
                     /translation="MAVRIIHYYLDTNSGNYAKRAFAFGSTSIAFNKDVKFHISAKTY
                     EPVCISNLKLYPLKDNFDFESDSSLAEFVNFFLEKELDPLKIGRTVNIHFIDQEKITP
                     MVIYKRVFQILQNQSFNSLTPSITSLREYYKTRILPSGVLYLQDDNTNSQTNLEQTIL
                     YNNTSFNKISKEPLNKSSSSAKKPCFITLYLKDEHNKPIANAKIIIKGFKHDEALRVV
                     NLKRRSDEKGKIKFDKEKYFSDCYSFKVKLDESEAYFPTPLQNAKRIFNNYTHHKVGL
                     ILKFKAKGHLVYDGFNLYHYKGNELINSYMARSGTAKADNEKRSKKQIANYFYQDEKD
                     TSKGKKAYFYYDDESIKDRFGTLPEGEYYLKINEIAKDTNPSFLKDYPFEIGKTWGKC
                     CVRLYTNKECSKTFKELKIKESNEKENKKSKKEQSIIKDNLYLYSINEKGEFGNNGSI
                     GMAQAQLLEDLSKQVKFVQSEGENIISLKVAYPEKIDNKIIFVGKVYE"
     gene            1619..>2170
                     /locus_tag="SB502_001735"
     CDS             1619..>2170
                     /locus_tag="SB502_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435131.1"
                     /translation="MNKTLIFHENSHIDLNASFAPGTYIELQLEKESDKTLNWSYVEC
                     NSEKKMRSLLDVDCRSIEAKDLKFIASFKGNICGFHLPISRDNEPIKDIKDYKYYIIV
                     FAYDEKKAIPSLEDFHIVIDMSFRVGVGRDEDVKESKLRNDFNSDIIQTNCIFSVLEA
                     VEFLKACQSFKEKAKETNNYEFFK"
BASE COUNT          906 a          238 c          347 g          679 t
ORIGIN      
        1 atcataaaaa ctaaggtata tggaggtgta aatccgtttc ttgatgaaga taataagaat
       61 aaagataaaa gcactaaaga taaagaaaat aatgaagaaa ataaatacga aaaatacgat
      121 gaaaataaaa tggcagttag aataattcat tattatttag atacaaattc aggcaattat
      181 gctaaaagag cttttgcttt tggaagcaca agtatagcat ttaataaaga tgtaaaattt
      241 catattagtg ctaaaactta tgaacctgtt tgtatttcca atctaaaact ttatccttta
      301 aaggataatt ttgattttga aagtgatagc agtcttgcag aatttgtaaa tttctttcta
      361 gaaaaggaat tagatccctt aaaaataggt agaacggtta atattcattt tatagatcaa
      421 gaaaagatta cacctatggt tatttataaa agagtatttc aaatacttca aaaccaatct
      481 tttaattctt taactccttc tataacttca cttcgtgaat attataaaac ccgtatcctg
      541 ccatctgggg tattatattt gcaagatgac aatacaaact ctcaaaccaa tttagaacag
      601 actatcctct acaacaatac aagttttaac aaaatttcaa aagaaccctt aaataaatcc
      661 tcatccagtg ctaaaaaacc ttgctttatc actttatatt taaaagatga acacaataaa
      721 cccattgcta atgctaaaat cattatcaaa ggttttaaac atgatgaagc tttaagagta
      781 gttaatctaa aaagacgcag tgatgaaaag ggtaaaataa aatttgataa agaaaagtat
      841 tttagtgatt gttatagctt taaagtaaag cttgatgaaa gtgaagctta ttttcctact
      901 cctttacaaa atgctaaaag gatatttaat aattataccc atcacaaagt tggactcata
      961 cttaaattta aagcaaaagg tcatttagtt tatgatggat ttaatctcta tcattataaa
     1021 ggaaatgaat taattaattc ttatatggca agaagtggta ctgctaaggc agataatgaa
     1081 aaaagaagta aaaagcaaat tgcaaattat ttttaccaag atgaaaaaga tacaagtaaa
     1141 ggtaaaaaag cttattttta ttatgatgat gaaagtatta aagatagatt tggcactttg
     1201 cctgaaggag aatattattt aaagattaat gaaatagcta aagatactaa ccctagcttt
     1261 ttaaaagatt atccctttga aataggaaaa acttggggaa aatgttgtgt aagattatat
     1321 accaataaag aatgttctaa aacttttaaa gaattaaaaa taaaagaaag taatgaaaaa
     1381 gaaaataaaa aaagcaaaaa agaacaaagt ataataaaag ataatctata tctttactct
     1441 atcaatgaaa agggagaatt tggcaataat ggtagcatag gtatggcaca agcacagtta
     1501 ttagaggatt taagtaagca ggttaagttt gtgcagagtg agggggaaaa tataatctca
     1561 ctcaaagtgg cttaccctga aaaaatagat aataaaatta tatttgtagg aaaagtttat
     1621 gaataaaaca ctaatatttc atgaaaattc ccatattgat ttaaatgctt cttttgcacc
     1681 agggacttat atagaattgc aattagaaaa agaaagcgat aaaacgctaa attggagtta
     1741 tgtagagtgc aatagtgaga aaaaaatgcg atctttgttg gatgttgatt gtcgttctat
     1801 tgaggctaaa gatcttaaat ttatagcgag ttttaaaggt aatatttgtg gatttcattt
     1861 acctataagt agagataatg aaccaataaa agatataaaa gattataaat attacatcat
     1921 agtctttgct tatgatgaaa aaaaggctat acctagttta gaagattttc atatagttat
     1981 agatatgagc tttagagtag gagttggaag ggatgaggat gtaaaagaaa gcaaactaag
     2041 gaatgatttt aatagtgata taattcaaac aaattgtatt tttagtgttc ttgaggctgt
     2101 agagttttta aaagcttgcc aaagttttaa agaaaaagca aaagaaacaa ataattatga
     2161 attttttaaa
//
LOCUS       DARATF010000147         2166 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.147, whole genome shotgun sequence.
ACCESSION   DARATF010000147 DARATF010000000
VERSION     DARATF010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.147"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..722)
                     /locus_tag="SB502_001736"
     CDS             complement(<1..722)
                     /locus_tag="SB502_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEG0435132.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVT"
     gene            801..1487
                     /locus_tag="SB502_001737"
     CDS             801..1487
                     /locus_tag="SB502_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0435133.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFDFKFKCFIKLIIDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            1489..>2166
                     /locus_tag="SB502_001738"
     CDS             1489..>2166
                     /locus_tag="SB502_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0435134.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKISILMGANGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKLNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIEERIKESLMFLNLDESLLSKHPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFL
                     DKNTTLLFKKAILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQGVKF"
BASE COUNT          707 a          320 c          317 g          822 t
ORIGIN      
        1 gttacccatt tgataaattt actagcttct gtataattta catttttaca atgcttagga
       61 tttgtcgcta taacagaata aaaattttta agactatcat cgccttcatt tacaatgact
      121 aagtttggtt tgcctttttc attggcttca tatttgatat aagtaccacg atcggttaaa
      181 atcacacctt ttttttcttc agcaatttta atgcttgcta acataccttg tccgctttgt
      241 tgataccagc tttgcttttc aggaacaccg ccaagatttt tccaaaggct tttttcttta
      301 ttgtcagtgc ctgatttatc gcctcttgag atgaaagtaa gcttttcatt tttgataagt
      361 tctaagcttt cttttaaatt tttaccttta aatttagaag ctaaagattt atctgcgatg
      421 atgataaaat cattatacat cacaggagtt ctatctacac caaagccttt tttcataaat
      481 tctttttcag cctttggaga atgcacaaaa agcacatcag cattgcaatc ttcacccatt
      541 tttaaagccg cacctgttcc tacggcaacc cattttaagg tattgccact ttctttttca
      601 taaagaggtt ttagagcatc taaaagtcct gtattgtcag tgcttgttgt agttgccatt
      661 ttaagttctg ctgcacttgc acttaaagct aaagcaaggg ctaaagaaat gatttttttc
      721 attttttttc cttataaatt tacataaaaa aatattttag cataattatg ctaaaattac
      781 ttattttaaa aaggatattt ttggattata tttttgatgg ttttaaacag gctttatttt
      841 tacttttcaa tgctgatgaa agcgtaattt cagctataaa aactacactt ttaagctcaa
      901 gtatttctat agttttagct ttgcttatag gttttccttt gggatttatc ttaggttttt
      961 ttgattttaa attcaaatgc tttataaaac ttatcataga tactagcctt tcttttccaa
     1021 cagttgcagt aggacttata ctttatgcac tgatttcaag tcgaggacct ttgggagaat
     1081 ttggactact ttttactata aaggctttaa ttttagggca gtttatctta gcacttccta
     1141 tagtgatcgc acttttttca aatttgatag aaaatatgaa taaaaaacat tttttactta
     1201 taaaatcttt tcacctaagt cctttaaaac ttgttttaac gatgatttat gaattacgct
     1261 ttgctttgat tagcgtcgtt gcactagctt atggacgcat tgtagcagaa gtaggggtag
     1321 cgatgatagt aggtggaaat atcaaatacg acactagaac cataaccaca gctatttcac
     1381 ttgaaactaa caaaggcgaa tttgctagcg gtatagcttt ggctttggtt ttaattctca
     1441 ttgccttttg tttaaatttc atcacacaca aactcaaaag aacataaaat gatagaaatt
     1501 tctaatcttt ttttcaacta tcaaaacaaa gaagttttaa aaatcaaaaa tttaaaactt
     1561 gatacgagta aaattagcat cttaatggga gcgaatggaa gtggaaaatc tacattttta
     1621 agaatattaa aatttttaga aggagatttt tcaaaaaata tttcttattt tggaaatttt
     1681 aaacttaata ataaacaaaa gcgtgaaatt tatttgcttt ttccagagcc tattttgtta
     1741 aatcgtagtg taagggcaaa ttttttattt accttaaaaa cttatgggat taaagaagat
     1801 attgaagaac gcataaaaga aagtttgatg tttttaaatt tagatgaaag tcttttaagt
     1861 aaacatccta atgaactttc atcaggacaa agtcaaaaaa tagcttttgc tatagcttta
     1921 agcgtaagag cgaagtatta tttacttgat gaaccaagtg cttttttgga taaaaatact
     1981 acacttttat ttaaaaaagc tattcttaaa atgcatgaaa atttcaatac aggtttttta
     2041 atcgcaagtc atgataaaca ttttttagat tctttggcgc aaaaaaaact ttatttgcac
     2101 agtggagaaa ttttagaatt tgaaaatact aatgtttttg aactagaaaa tcaaggtgtg
     2161 aaattt
//
LOCUS       DARATF010000148         2088 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.148, whole genome shotgun sequence.
ACCESSION   DARATF010000148 DARATF010000000
VERSION     DARATF010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.148"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(108..467)
                     /locus_tag="SB502_001739"
     CDS             complement(108..467)
                     /locus_tag="SB502_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435135.1"
                     /translation="MVIFKNILLFLFFSTYLLAQEDFTPLEQCTYENEKFWIKILNLC
                     PEGNITCDKVVYVGVNKNNGKYIVLNGKSISDVNMNFKGYVFKNGIYEYNIFNNFLYI
                     SKNKQIIQEYRLKLCEK"
     gene            complement(496..1083)
                     /locus_tag="SB502_001740"
     CDS             complement(496..1083)
                     /locus_tag="SB502_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HEG0435136.1"
                     /translation="MVVNGVSENKIKAKNKDVNINNGTKYTNTTKSNNISSSENNTQE
                     KITHLSNDGQNLLKNIEKLRLKPYNDQNGKEITSHVKGVTIGYGHLIGQNEWDLYKNG
                     ITLREADKLFKSDLLPFENAVKNSINSSLAQNEFDDLVILCFNIGIDNFKNSFVAKII
                     NAEKTGYKTLKEAWMAWNKSQNKVMQGLINRRNAE"
     gene            1574..1912
                     /locus_tag="SB502_001741"
                     /pseudo
     CDS             1574..1912
                     /locus_tag="SB502_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935934.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          729 a          302 c          258 g          799 t
ORIGIN      
        1 ttaattagga tttttataac tttaaaaact tcttgtaatt cttattgcat ctttttaact
       61 ttttgcatat tctaggtatt tgttgttgct tgctgccttt gttgcgtcta tttttcacat
      121 aatttcagac gatattcttg tataatctgc ttgtttttag aaatatataa aaaattatta
      181 aaaatattgt attcataaat accattttta aaaacatatc ctttaaaatt catatttaca
      241 tcactaatag acttaccgtt taagacaata tattttccat tatttttatt gacacccaca
      301 tatacaacct tatcacaagt tatattaccc tctggacata gatttaaaat ttttatccaa
      361 aacttttcat tttcataggt acattgctct agtggagtaa aatcctcttg tgctaacaaa
      421 taagtactaa aaaataaaaa caataatata tttttaaaaa ttaccatttt tcataacctc
      481 cttgagtgta aagctttatt cagcatttct cctattaatt agtccctgca ttactttatt
      541 ttgacttttg ttccacgcca tccaagcttc ctttaatgtt ttgtaacccg ttttctctgc
      601 attgatgatt ttggcaacaa aagagttttt aaaattatca atccctatat taaaacataa
      661 tataaccaag tcatcaaatt cattctgtgc caaggaagag tttattgaat tttttacagc
      721 attttcaaag ggtaacaaat cgcttttaaa caatttatcc gcttctcgta aagtaatacc
      781 atttttatac aaatcccatt cattttgccc tataagatgt ccatatccga tagttacacc
      841 tttaacatgt gaagtaattt cttttccatt ttgatcatta taaggtttga gtcttagctt
      901 ctctatattt tttaaaagat tttgaccatc attgcttaga tgagtgattt tttcttgggt
      961 attgttttca ctagaactta tattattgct ttttgtagtg tttgtgtatt ttgtgccatt
     1021 atttatattt acatctttat tttttgcttt tattttgttt tcactaaccc catttaccac
     1081 cacaaattta ccaacataaa gctcttgttt tctatcttca tcttctaaga tttcatctag
     1141 tcaaggtgat agaatgaaaa aatataaaaa gattttagtg ctattatcac caataatttt
     1201 aattatatta ttttataccc ctttttatat cctagctatt gggaatttag aaggttatgt
     1261 aaattaaata attatccaaa aagtgaggaa aaatataata gaatcttagc ttattttgat
     1321 aagagtttag atggtagtat agaaaaaaat ggttatgcaa aaataggtta tggtaataga
     1381 atagatttag gtatatatat ttattataag aatccaaata acaaaacatt aacttttaaa
     1441 aatattaata aaatatattt tagaccaata tggaaaaact atgcaccaaa tatttatggt
     1501 aatgagggta atatggattt tagattaaag cttgacggtg aaatagattg cagaagctta
     1561 ttaggagaat tatatggata ataaacaaca aatcaataaa ctaagggaca tggcagaact
     1621 tgcacaggca agttatggat attttcatta tgttgataat aaatttgata taaaagatga
     1681 agataaaatt gttacctttg aaaatgtttt agatattacc tataaaaact ctaaaattat
     1741 tgatgaaaga ggatttaaaa tcggcaagct cgatggcgac ttctccccac tccaagctaa
     1801 acaattcttt tctcgctatg atttattaat ccatcaacca aatacagagt caagcttttc
     1861 tgctactttg ttttacgata aacaaaaaga tgaatttata ataggattta ggggaactga
     1921 agtttctttt aaagatttaa aagcgacatg ggaaaccgct ttagatacaa cccaagactt
     1981 agtcttatct ctcaatggca atcttcaatc ttcttttctt ttagaatttt tagaacaagt
     2041 aaataaaata atcaaaaata aacacaaaag aattatattt gtaggaca
//
LOCUS       DARATF010000149         2054 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.149, whole genome shotgun sequence.
ACCESSION   DARATF010000149 DARATF010000000
VERSION     DARATF010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.149"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(108..458)
                     /locus_tag="SB502_001742"
     CDS             complement(108..458)
                     /locus_tag="SB502_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4299 family protein"
                     /protein_id="HEG0435137.1"
                     /translation="MEDLKLLQRRWEEAYEAMPKLYETPDGLIINFTLSEDTDTILFK
                     KPWENFELDDEDKETKWRLSFFSISKDEPLGYLEYKEALEKLQDFSLIQSEERILIRA
                     MSLEELESLELKGW"
     gene            complement(543..1109)
                     /locus_tag="SB502_001743"
     CDS             complement(543..1109)
                     /locus_tag="SB502_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002935909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435138.1"
                     /translation="MKYYKMMYNYNHNDVDNWYSCDLVDIKNNDEYALLESKPITNWQ
                     TPSFEIDKDDGNILTDLIHNDCGWRIVSPKFINLMQDLIKDCVQYLDVEIKSQEINYY
                     GCKIMHVTKSLEALDYEHSVYTYMGDNDEYLSITKAVLKKSKLDGSHIFRIKDDEVPV
                     FVSSEFRKIVRENNLLGFSFSEVMVYEN"
     gene            complement(1109..1459)
                     /locus_tag="SB502_001744"
     CDS             complement(1109..1459)
                     /locus_tag="SB502_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AHH domain-containing protein"
                     /protein_id="HEG0435139.1"
                     /translation="MEYDRIRWEGMGDDNKQSSIQTHHIATDKNKKFTKEFRKITKKY
                     NMELDEDWNKVKMPHRGRHPNEYHEYILEKMSKIDKIARGDKDKFIKEFEKLKEEVKN
                     NPAILHKDYYKERK"
     gene            complement(1878..>2054)
                     /locus_tag="SB502_001745"
     CDS             complement(1878..>2054)
                     /locus_tag="SB502_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435140.1"
                     /translation="DFWEFSAKENSILWEKFLSKNTLKPFPLNFDCSLEEKLLYAKDE
                     QLENILKTHKTFHG"
BASE COUNT          648 a          337 c          225 g          844 t
ORIGIN      
        1 ttttttagaa aaaattttat ctacaccttt tttcatattt acaatatcta aattttcatc
       61 agataaaaat tctataagtt tatttaaaaa tataggttga ggaagcatta ccacccttta
      121 agctctaagc tttcaagctc ttctaaactc attgctctaa ttaaaatcct ttcttctgat
      181 tgaattaaag aaaaatcttg caatttctct aaagcttctt tatactctaa ataccccaaa
      241 ggctcatctt tgctaatgct aaaaaaactc agcctccatt tggtttcttt atcttcatca
      301 tctagttcaa aattttccca aggtttttta aaaagaatag tatctgtatc ttcacttagg
      361 gtgaaattta ttattaaccc atctggtgtt tcataaagtt taggcatagc ttcataagct
      421 tcttcccaac gtctttgtaa aagttttaaa tcttccataa atttttcctt aaatataaaa
      481 tgaaattata actaaaaatc tttttatatt aaattgcaaa attttttata gcttttagtc
      541 tttcaatttt catataccat aacttcacta aaactaaaac ctaataaatt gttttctctt
      601 actatttttc taaattcact tgatacaaaa acaggtactt catcatcttt aattctaaat
      661 atatggcttc catcaagttt tgattttttt aaaacagctt tagtaatact taaatattca
      721 tcattatcac ccatataagt atatacagaa tgttcataat ctaaagcctc aagtgatttt
      781 gttacatgca taattttaca accataataa tttatttcct gacttttaat ttctacatct
      841 aaatattgca cacaatcttt gattaaatct tgcattaaat ttataaattt aggagagact
      901 atacgccaac cacagtcatt gtgtataaga tcagtcagta tattaccatc atctttgtcg
      961 atttcaaaac taggtgtttg ccaatttgtg ataggtttgg attctaaaag tgcatattca
     1021 tcgttatttt ttatatctac aagatcacaa gagtaccaat tatccacatc gttatgatta
     1081 tagttataca tcattttata atatttcatt attttctctc cttatagtaa tctttatgaa
     1141 gtatagcagg attgtttttg acttcttctt ttagtttttc aaattctttt atgaatttat
     1201 ccttatctcc tcttgctatt ttatcaattt tactcatttt ttcaagaata tattcatgat
     1261 attcattagg atgtcttccg cgatgtggca ttttaacttt attccagtct tcatccaatt
     1321 ccatgttata tttttttgtt atttttcgaa attctttagt aaatttttta ttcttatcag
     1381 tggcaatatg atgggtttga attgatgatt gtttgttatc atctcccatc ccttcccatc
     1441 ttatcctatc atactcaatc ttagcaagag gactagcttg tattttagct aaagcaaatt
     1501 taatcttatt ctttttgggt atagcaaata taggataacc ttttatactc attcctatca
     1561 aacccatttg taatacagaa tgtttattat taactttatg atctgaataa gtataagcaa
     1621 ataccatagc tactttagta caaggtcctc ctagtatagg tggatttaaa catccactta
     1681 tactagctcc ttgtatttca ttatcaagca taataggaac attgtctgat tttattcttt
     1741 tagctttttt tgcttttaac ttaactctac ctccatgtaa gcatactaaa gtattatctt
     1801 ctaagatagg atgcatacaa gaagtatcag gacttatatt aatatcttct attctaggaa
     1861 taaggattgt tcttttttta gccatgaaaa gtcttgtggg ttttaagtat gttttctagt
     1921 tgttcatctt tagcataaag aagcttttct tctaaagagc aatcaaaatt taaaggaaaa
     1981 ggttttaggg tatttttact tagaaatttt tcccaaagta tagaattttc ttttgctgaa
     2041 aactcccaaa aatc
//
LOCUS       DARATF010000150         2043 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.150, whole genome shotgun sequence.
ACCESSION   DARATF010000150 DARATF010000000
VERSION     DARATF010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.150"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(27..902)
                     /gene="zupT"
                     /locus_tag="SB502_001746"
     CDS             complement(27..902)
                     /gene="zupT"
                     /locus_tag="SB502_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002919197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEG0435141.1"
                     /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNYYNSHWAELLGLACFFGGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     AGMMIMALSLNLLEY"
     gene            1098..>2043
                     /locus_tag="SB502_001747"
     CDS             1098..>2043
                     /locus_tag="SB502_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEG0435142.1"
                     /translation="MQKMNSGKSVGVSVKLTLWVGILVVLILAITSTVSYFDAKNHTY
                     ELLKENQLKTMDDVKVTFENYSKSKQKAIEVLAYESAKKLEDENISLLLDSFKKAFDF
                     DIVFIAFDKNNKMLLSNGTILDKKSNFDITKQIWYQEAKNNKGITITQPYKSPIDQEI
                     GITYVFPIYKNNQLIAFVGGDYNLDKFSKDVLSLGHSSTTYAAVYDSEGRIIFHEVLD
                     RILTKNTLSVNIANAIKENPEYIDPNKRDILFPVFDDKGIKYETMCDTSSNGLYRICA
                     VTLDSNYTSAVNSILMKQAIVGIIAIIIALILIRFLISR"
BASE COUNT          796 a          310 c          290 g          647 t
ORIGIN      
        1 aaacacttaa aaacaaaaaa taattttcaa tattcaagta aatttaaact taaagccatt
       61 atcatcattc ctgcgataag tccatataaa ctatcatgag ccttatcata agtttttgca
      121 gcgggcaaaa gctcatcaag agatataaaa accataattc ctgcaatcac agcaaaactt
      181 atagctaaag taagatcgcc tataaaaggc aataaaatca aagctccaac aaaagcaccc
      241 aaaggctctg caaaacccga aagagctgaa taaataaaag cttttttctt atctcctgta
      301 gcatggtaaa ttggcaaact cacagccaaa ccttctggga tattgtgtat agccacagct
      361 atagctatag caattcctaa agtaagatta tcaagacttg aaataaaagt agcaaaacct
      421 tctgggaaat tatgtatagc aatagccaaa gctgtaaaaa tccctgtacg ttttaaagct
      481 ttagtattga tctgatgcaa cttttctcca ggatgaaatt tcggaggatt ttgtcctttt
      541 tggggcaagg gacaaatttt taactcgctt aaatcctctt taggctcgtg aggattgaca
      601 tcttcgggga ttaatttatc aatcaataaa gatattaaaa ttccaccaaa aaaacaagcc
      661 aatcctaaaa gttcggccca atgtgaatta taataatttt taaaatcttt aagagcagtg
      721 ggtaaaattt ccataaaaga aatgtatatc attactccag ctgaaaaacc aagccctaaa
      781 gaaagcaccc ttaaatcatc ttttctagaa aaaaaggcta ttatagaacc tatagccgta
      841 gaaaaacctg caaaaagagt caatagcatt gcgataaaaa tttgttcaaa tgtaaattgc
      901 atttattaat tcttaatata taattatagt gttttataat tatatatatg taaaaagtta
      961 ataaatggca aaaagtataa aaaatactaa aatttttaag aatatttatg taaaaaagtt
     1021 catttttatg catttctttc tctatatttc tgctataata ataattttat ttccaaaata
     1081 taaatatagg agttataatg caaaaaatga attcaggcaa atccgttgga gtttcagtca
     1141 aacttacgct gtgggttgga attttagttg tattaatttt agcaatcaca agtaccgtta
     1201 gttactttga tgccaaaaat cacacatatg aattactaaa agaaaatcaa ttaaaaacta
     1261 tggatgatgt taaagtaact tttgaaaact attccaaaag caagcaaaaa gctatagagg
     1321 ttctagcata tgaaagtgct aaaaaattag aagatgaaaa tatttcactg cttctagatt
     1381 cttttaagaa ggcgtttgat tttgatattg tttttattgc gtttgataaa aacaacaaaa
     1441 tgcttttgtc aaatggaaca attttagata aaaaatcaaa ttttgacatt acaaaacaaa
     1501 tttggtatca agaagcaaaa aataacaaag gcatcacaat aactcaacca tataaatccc
     1561 ctatagatca agagattggt ataacttatg ttttccctat ttataaaaat aatcaactta
     1621 tagctttcgt tggaggcgat tacaatctag ataaattttc caaagatgta ttatctttag
     1681 gacactcatc aactacttat gctgctgttt atgactctga aggaagaatt atttttcacg
     1741 aagtgcttga tagaatttta acaaaaaaca ctttaagcgt taatattgct aacgccataa
     1801 aagaaaaccc tgaatatata gatccaaata agagagatat tctttttcct gtatttgatg
     1861 ataaaggtat caaatatgaa acaatgtgcg atacaagttc caatggatta tatcgtattt
     1921 gtgctgtaac tttagatagt aactatactt ccgctgttaa ttccatttta atgaaacaag
     1981 ctatagtcgg tattatagct ataatcatag ctttaatctt gattagattt ttaatcagca
     2041 gaa
//
LOCUS       DARATF010000151         2016 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.151, whole genome shotgun sequence.
ACCESSION   DARATF010000151 DARATF010000000
VERSION     DARATF010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.151"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..464
                     /locus_tag="SB502_001748"
     CDS             <1..464
                     /locus_tag="SB502_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEG0435143.1"
                     /translation="KKSFVLRQKINKNLKQINLLSEAFNLLLSEQAQYKKHLKILNLS
                     ISILNKNTKEHLTRIDTLYTLTSAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNT
                     NNLFFKDSPYGTLYIFSLICCILIVGFIFYYSKKTKEFDLDEGKKAKKQTK"
     gene            517..593
                     /locus_tag="SB502_001749"
     tRNA            517..593
                     /locus_tag="SB502_001749"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:551..553,aa:Arg,seq:gcg)
     gene            1016..1360
                     /locus_tag="SB502_001750"
     CDS             1016..1360
                     /locus_tag="SB502_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435144.1"
                     /translation="MLTEKIDPKEQIQKEDIKKSKTLIIHLNSYLEAENNLQKIKILV
                     KIYQNLQKCSRTPDLIDIEELEFNKEDIFEELFYALGGLGGIYSVEMIQSRIANFIKI
                     LGGEPKLLLEQF"
     gene            complement(1411..>2016)
                     /locus_tag="SB502_001751"
     CDS             complement(1411..>2016)
                     /locus_tag="SB502_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEG0435145.1"
                     /translation="FDMKKIRFRTEKSGEKLNYLNENEIIRLNNVLEKEKAKKEVYNS
                     FRNSLLIKLMLYGGLRISEALNVKLCDFEEVDDEILKISIIGKGGKEQFAFIKKEEVD
                     DELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYAKALISKKGLHLLRHTLAMR
                     LTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLNN"
BASE COUNT          770 a          283 c          226 g          737 t
ORIGIN      
        1 acaaaaaatc ctttgtttta agacaaaaaa ttaacaaaaa tctaaagcaa attaatcttc
       61 taagtgaagc tttcaatctt ttgcttagcg aacaagcaca atacaaaaaa catttaaaaa
      121 ttctaaattt atccatcagc atcttaaata aaaataccaa agaacatcta acaagaattg
      181 atactcttta tacattaaca agtgcaatta aaaatgaaaa aatgaataaa agtatttatc
      241 ttttaagcat actttcttct attttcttac ctttaaattt gatcgtagga ttttttggaa
      301 tgaatactaa taatcttttt ttcaaagata gcccttatgg tacactttat attttttctt
      361 tgatttgctg tattttgatt gtaggtttta tattttatta ttcaaaaaag actaaagaat
      421 ttgatttaga tgaaggtaaa aaagctaaaa aacaaacaaa ataagcaaaa ttttgcttat
      481 tttaagaata tttatatata attttaactt atttttgcgc tcatagctca gctggataga
      541 gcatttgatt gcggttcaaa aggccagagg ttcgaatcct cttgagcgca ccatcacttc
      601 ttttcttaaa taatcttgaa tcatctgaaa taatcatcta aagcatgata tagcaatgtt
      661 tgaaagcttc taaaataatc tcaaataatc aattttgaca attttaaaag tatatgttat
      721 agtatatgtt aaattttaaa attcaaaaat aacatatact ttttaacata ggaatattaa
      781 aaatgattat tgttaatgat aagcaactta aaactttaat tgtaaaaaaa gaacatatat
      841 taaagatgca tacacaaaaa atctctacat cgaagcaaaa gattcgctaa aaggtactat
      901 tatctttttt tttattttag atataggtta aaaaaaaata caaagtatta aaataggaaa
      961 atacccaaca accacactgt caagcgcaag agaaaaagca aatattttta ataatatgtt
     1021 aactgaaaaa attgatccca aggaacaaat tcaaaaagaa gatataaaaa aatcaaaaac
     1081 cctaataata cacttaaatt cttatttaga ggctgaaaat aatctacaaa aaatcaagat
     1141 tttagtcaaa atatatcaaa atttacaaaa atgtagccga actcctgatc ttattgatat
     1201 agaagaactt gaatttaaca aagaagacat tttcgaagaa ttattttatg ctttaggcgg
     1261 tttaggaggt atatattccg tagaaatgat acaatctaga attgcaaatt tcatcaaaat
     1321 acttggcgga gaacctaaac ttttattaga acaattttaa acacatagac ttcttcttga
     1381 agtctatgca aatactcaat tttagaaaaa ttaattattc aataacgcag cttttattgt
     1441 atcatttgtt gctttggcat atatagtagt agtatttaga tttgcatgtc ttagaatttt
     1501 ttgtatgacc acaaggtttg ttcctttggc tgttaatctc atggctaaag tgtgtctaag
     1561 caaatgaagt ccttttttgc tgatcaaagc tttagcgtaa atattattta caatcaaaaa
     1621 agcattactt ctatttaaat gttttcctgt gctagtttgc attatgtaat cactatcttg
     1681 gatattttct ttaaaatatt caagctcatc atctacttct tcttttttaa taaatgcaaa
     1741 ttgttcttta ccgcccttgc ctattatgga tatttttaat atttcatcat caacctcttc
     1801 aaaatcacaa agttttacat ttaaagcttc agaaattcta agtcctccat aaagcataag
     1861 ttttatcagt aaagagtttc taaaactatt ataaacttct ttttttgctt tttctttctc
     1921 taaaacatta tttagcctta taatttcatt ttcattaaga taatttaatt tttctcctga
     1981 tttttctgtt ctaaacctaa ttttcttcat atcaaa
//
LOCUS       DARATF010000152         1998 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.152, whole genome shotgun sequence.
ACCESSION   DARATF010000152 DARATF010000000
VERSION     DARATF010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.152"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..204)
                     /locus_tag="SB502_001752"
     CDS             complement(<1..204)
                     /locus_tag="SB502_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435146.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKH"
     gene            complement(204..1142)
                     /gene="rsmH"
                     /locus_tag="SB502_001753"
     CDS             complement(204..1142)
                     /gene="rsmH"
                     /locus_tag="SB502_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEG0435147.1"
                     /translation="MILEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKN
                     HPDLKFIACDQDQQALEFSKKRLKDFRNRITFMQSNFSEVLEKISLKEELRGILADIG
                     VSSFQLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAH
                     FIAEKICLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKD
                     FLGHLENLKPKNCILAIISFHSLEDRIVKKFFKKWSKNCICDEKIMRCECGNNHSLGQ
                     IITKKAISASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            1301..>1998
                     /locus_tag="SB502_001754"
     CDS             1301..>1998
                     /locus_tag="SB502_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEG0435148.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTLENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENEILQKLANTREFQDPTGDFNKTIYYELLNANNLAPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHK
                     EDYKTKKIYEISTY"
BASE COUNT          698 a          279 c          274 g          747 t
ORIGIN      
        1 atgttttgac tcatactctt catcaagttc ttctaagaat ttattaggag tctttttttt
       61 aaaacgacgt cttaaaatat catcgctaga aatttcatct cttaaatcat catcaagcgg
      121 tttgccttga tttatggcgc gagaaaattt cagcattttt tggcgtatgt tttggcgttc
      181 ttttataaaa tcatcttcta gcattattta ttgtccaaat tattaaaata aaaagcccgc
      241 attttagcac aactagagcg agaatttttt aaaagttctt ccttgcttgc acttatagct
      301 tttttggtta ttatttgccc taggctatgg ttatttccac attcgcaacg cattattttt
      361 tcatcacaaa tgcagttttt tgaccatttt ttgaaaaatt tttttactat tctatcttct
      421 aaagaatgaa aactaatgat tgctaaaatg caattttttg gttttaaatt ttctaaatgc
      481 ccaagaaaat ctttaagcac tttaagttct tgatttactt ctattctaat ggcttgaaat
      541 gctaaagtag ctttggaaat ttttctatga ttttgtttac cttttcctat gatttgataa
      601 agctctttgg cacttttgat tggattttta cttctttcta ggcaaatttt ttcagcaata
      661 aaatgtgcat catgtaattc tccataatct ttaaaaatgg aagttaattg ctcttttgta
      721 taagtattaa taatctcata agccgatatt ttggagtttt gattcattct catatccaaa
      781 aagtcagaat ttacactaaa acctctttcg ttattatcaa gctgaaatga agaaactcca
      841 atgtctgcta aaatacctct taattcttct tttagtgaaa ttttttctaa aacttcacta
      901 aaattacttt gcataaaagt tatcctattg cgaaaatctt taagacgttt tttagaaaat
      961 tctaaagctt gttgatcttg atcacaagca atgaatttaa gatcaggatg atttttaagc
     1021 aaagcttcac tatgtccgcc aaatcctaaa gtgcagtcta aaaaataacc tgttttaaga
     1081 tttttaaaaa tctcttgaac ttcattaagc aaaactggga tatgaggaat ttccaaaatc
     1141 aatcctaata aatttttata aactataatt ataactaaat ttcattgtaa aaatcataaa
     1201 atttaaagaa caaatatttt ttggtaaaaa ttttataatt aaactccact taaacacttc
     1261 tacgatacaa tatctggttt aaatttaatc aaggaatgat atgcttactt ggatgcaaca
     1321 tcacaaaaaa tatcttgttg ttactatatg ggttagtact atagcttttg ttggcgctgg
     1381 ctttttaggt tggggtgctt atgattttaa tctcaataga agttcgagtg ttgcaactgt
     1441 aggaaatgaa aagataggtt ttagcgaatt tgatactaga tatagacaaa ttttaagtta
     1501 ttataatcaa attagcaatg gtgctttaac tctagaaaat gctgagcaac taggcattaa
     1561 aaatatagct ttaagctctc ttgttgaaga taagcttttg ttaaattttg ccaaagattt
     1621 gggtattggt gtaaacgaga atgaaatttt acaaaaactt gcaaatacta gagaatttca
     1681 agatcctaca ggggatttta acaaaacaat ttattatgaa cttttaaatg ccaataattt
     1741 agctccaaaa gattatgaaa cacaacttgc aaatgaagta attaccgata aacttaatca
     1801 aatttttaat attcctagca aagatgagga attaaaaatg ttagcttcta gttatttcat
     1861 gcaagatgct ttaagtattg caaaaattga ttatgacaaa aaaaatatta agattaacga
     1921 agaggattta aaaaagcttt ggaatgaaca taaagaagat tataaaacta aaaaaatata
     1981 tgaaatttca acttattt
//
LOCUS       DARATF010000153         1960 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.153, whole genome shotgun sequence.
ACCESSION   DARATF010000153 DARATF010000000
VERSION     DARATF010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.153"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            105..1313
                     /locus_tag="SB502_001755"
     CDS             105..1313
                     /locus_tag="SB502_001755"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEG0435149.1"
                     /translation="MCKISVIIPIYNVEKYLDECLKSVINQTYKDLDIILVDDGSTDN
                     SLNIAKEYAKKDERIFLIAKGNGGLSSARNAGLEFIKGTKLRDFFENEENIISYKQSN
                     TFKNSTKELTKEEINKNFTKLSKNIIQTKLKNLNDFIIQDLPDNIIHFLDSDDYLELD
                     CIEKCVNEMSKDDIDICTHNIKEFLEEEQVFRQKAECDIYLNCKYTKNISGIDFFKKN
                     NICEFYFAWQGSFRAKLLNIYKLRFTYGIYHEDHDFGTILFLSAKKITCVKEELLIYR
                     IRANSIIKSEKEKIIPQSIPFYLEPLRYYFDDYSKLRAYFKAYCMCVIGVNILLFCKE
                     SNILDKKTPNKIFLHYIHYYLEQYYPLNYLNINDLFTLVGINLKLFRFKIMLRFYFRH
                     PKKIFKKNNA"
     gene            1306..>1960
                     /locus_tag="SB502_001756"
     CDS             1306..>1960
                     /locus_tag="SB502_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0435150.1"
                     /translation="MPKISIILPTFNVEKYIAKALESCINQSFKDIEIIVVDDCGSDK
                     SIDIAKEYAKKDERIKIIHNEENLGTFAARNNGVKHSNGEYLMFLDPDDFLELEACEK
                     LILLINTYKICQFSFTQISNGIKLKSVFKDTLKNLKEFKGIYWNIWTLFVKKDFYLKS
                     LEELFLIDKKLLVAEDMLAVFFLINNLKDDEYLQVDLHLYNYVDNSFSITKRRKNKEK
                     "
BASE COUNT          792 a          187 c          288 g          693 t
ORIGIN      
        1 aagtatttta aaaataaatt taattgaatg tgttataatt atcgcttaga ataccatgtt
       61 ggagtattgg tattgttaag cttaaaattt aataaagaat taatgtgtgt aaaatttccg
      121 tcataatccc aatctataat gtagaaaaat acctagatga gtgtttaaaa agcgttataa
      181 atcaaactta taaagatcta gatattattt tagtagatga tggtagtact gataatagct
      241 taaatatagc taaagaatat gccaaaaaag atgaaagaat ttttcttatt gcaaaaggaa
      301 atggtggctt aagttcagct agaaatgcgg gtttggaatt tataaaaggc actaaattaa
      361 gagatttttt tgaaaatgaa gaaaatatta ttagttataa acaatcaaac acttttaaaa
      421 atagtacaaa agaacttaca aaagaagaaa taaataaaaa ctttacaaaa cttagtaaaa
      481 atataatcca aacaaagctt aaaaatctta atgactttat cattcaagat ttacctgata
      541 atattattca ctttttagat tccgatgatt atttagagct tgattgtatt gaaaaatgcg
      601 taaatgagat gagtaaagat gatatagata tttgcacaca taatattaaa gaattccttg
      661 aagaagagca agtttttaga caaaaagcag agtgcgatat ttatttaaat tgtaaataca
      721 ctaaaaatat cagtgggatt gattttttta aaaaaaataa tatttgtgag ttttattttg
      781 cttggcaagg aagctttaga gcaaagttgt taaatattta taagcttcgt tttacttatg
      841 ggatttatca cgaagatcat gattttggaa ctatattatt cttaagtgct aaaaaaataa
      901 cttgtgttaa agaagaatta ttaatttata gaattcgagc taattctata ataaaaagtg
      961 aaaaagaaaa gataatacca caaagcatac ctttttattt agaaccttta agatattatt
     1021 tcgatgatta ttctaagctt agagcttatt ttaaagctta ttgtatgtgt gtaattgggg
     1081 ttaatatttt gcttttttgc aaagaaagta atattttaga caaaaaaact ccaaataaaa
     1141 tatttttaca ttatattcat tattatcttg agcaatacta tcccttaaat tatctcaata
     1201 taaatgattt atttacttta gtgggtatca atttaaaact ttttagattt aaaattatgt
     1261 taagatttta ttttcgccac ccaaaaaaga tttttaagaa aaacaatgcc taaaatttca
     1321 atcatcttgc caacttttaa tgtagaaaag tatatagcca aagctttaga aagttgtatc
     1381 aatcaaagtt ttaaagatat agaaataatt gtagtggatg attgtgggag tgataaaagt
     1441 atagatatag ctaaagaata tgccaaaaaa gatgaaagaa taaaaataat tcacaatgaa
     1501 gaaaatttgg gtacttttgc agcaagaaat aatggtgtta aacattcaaa tggtgagtat
     1561 ttgatgtttt tagaccctga tgatttttta gagcttgagg cttgtgaaaa attaatactt
     1621 ttaataaata cttataaaat atgccaattt tcttttactc agattagtaa tggaattaaa
     1681 ttaaaatcag tatttaaaga tacacttaaa aatttaaaag aatttaaagg aatttattgg
     1741 aatatctgga ctctgtttgt aaaaaaggat ttttatttaa aatccctaga agaacttttt
     1801 ttgatagata aaaaactcct tgtagccgaa gatatgcttg cagttttttt cttgataaac
     1861 aatttaaaag atgatgaata cttgcaagtt gatttgcatt tgtataatta tgtagataat
     1921 tctttttcga ttactaagcg acgaaaaaat aaagagaaaa
//
LOCUS       DARATF010000154         1960 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.154, whole genome shotgun sequence.
ACCESSION   DARATF010000154 DARATF010000000
VERSION     DARATF010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.154"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1201)
                     /locus_tag="SB502_001757"
     CDS             complement(<1..1201)
                     /locus_tag="SB502_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEG0435151.1"
                     /translation="MFRLSSVSSKLLLSVAISVILAIALMIAIVSFQVASYSEKEAKD
                     TILLSSKRYVNYIQGMLNEEVTLTKGVATSLNEMFQNNDHIDIDLIESLIKNTFDSSH
                     YAAYTFLYLKDTTVLSDMQNVDKKYISPDGKTFSMIFFDQIAEKSGGITTISTPNNFS
                     QLNLIQNIEQNAKYGDKDSVFVDSPRKLNYDNNEFLGINFGMPIFNNKGKFIGVIGYT
                     IDLLEISETILDPKFDFFEGDLRFLMNDQGIIAIHKNKNAILKTLFDINKDQSAQLIV
                     EAVKNHKDEILDNYIASTGDLSYASISSFSTLGNSSHWSVIVTAPKKSVLAPLYKLQY
                     IIISVAIIALIAILAVVYFFIRKIIGSRIPLILKSLENFFRFLNHEKIEVQTIEIKAN
                     DELGKMGK"
     gene            complement(1313..1822)
                     /locus_tag="SB502_001758"
     CDS             complement(1313..1822)
                     /locus_tag="SB502_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HEG0435152.1"
                     /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFEIKKCYLILS
                     ILNQQQVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNP
                     EFYHTLKCI"
     gene            complement(1822..>1960)
                     /locus_tag="SB502_001759"
     CDS             complement(1822..>1960)
                     /locus_tag="SB502_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HEG0435153.1"
                     /translation="KFIPFRQKSREIKDLKKNATQFQRIAFENFNYENNYTIRLVSEC
                     F"
BASE COUNT          708 a          262 c          266 g          724 t
ORIGIN      
        1 ttttacccat tttgcccaat tcatcattag ctttaatttc aattgtctga acttctattt
       61 tttcatgatt taaaaagcga aagaaatttt ccaaagactt aagtataaga ggaattctag
      121 agcctatgat ttttcttata aaaaagtaca caacagccaa aatagcaatt agtgctatta
      181 tagcaacact aataataata tattgtagtt tatataaagg ggctaaaact gattttttag
      241 gagctgttac aattacactc caatgactag aattacctaa agtgctaaat gaagagatac
      301 tagcataact aagatctcct gttgaggcaa tataattatc taagatttca tctttatggt
      361 ttttaactgc ctcaacaatt aattgagcag attgatcttt gttaatatca aataaagttt
      421 ttaaaattgc atttttattt ttatgaatag caataatacc ctgatcgttc attaagaatc
      481 ttagatcccc ttcaaaaaag tcgaattttg gatccaatat agtctcggaa atttctagta
      541 aatctatagt atatcctata actccaataa atttgccctt attgttaaaa ataggcatac
      601 cgaaatttat acctaaaaat tcattattat cataattaag ttttctagga gaatctacaa
      661 aaacagagtc tttatctcca tattttgcat tttgttcgat attttgtatt agatttaatt
      721 gagagaaatt gtttggagtt gaaatagtag ttattccacc agatttttct gctatttgat
      781 caaaaaatat catagaaaaa gtttttccat ctgggctaat atatttttta tctacattct
      841 gcatatcact taatacagta gtatctttta aatagagaaa tgtatatgct gcatagtgac
      901 tactatcaaa agtatttttt ataagacttt caattaaatc gatatctata tgatcattat
      961 tttgaaacat ttcatttaac gatgtagcaa ctcctttggt tagtgtgact tcttcattta
     1021 acataccttg tatataattc acatatcttt ttgaagataa taaaatagta tctttggctt
     1081 ctttttctga atatgaagca acttgaaaag aaacaatagc aatcataaga gctatagcta
     1141 aaataacact aatagcaact gataataaga gttttgaact aacgctcgat agtctaaaca
     1201 tgaaaaacct cacataaatt ttttactaaa aataaagctc gttagcatat caaaaaaaat
     1261 aaaattaata taaaattatt ttttatagat gttttaaaac tatttaacaa tatcaaatac
     1321 attttaaggt gtgataaaat tcaggattat taaaagttgg aggaaaagga acgctagctc
     1381 taaattcttt ataggtatta cccgggagtg tgtctatgat ttctatagta taagaaacac
     1441 ttgtattttg cattttagcg ttacggatat ttttatcatt gaaaatttca cctcctactt
     1501 gttgttggtt taatatgcta agtatcaaat agcatttttt gatttcaaat ttagtaagat
     1561 tttgaacttt tccacttact ataacgcttt catgtcttag atctcttgtg taggttagtt
     1621 tgctaagatc ggcttgagtg gtgaattgat tgattgtcag aaaaatagaa tatatcaaaa
     1681 gtgcggtaaa aatagtagct atggtataag aaatcaaagc catttctttt tgtttgactt
     1741 ttagaaagat taaaatacaa atcaaggcaa agcaaataag taaaatgata aaagctataa
     1801 tatgaaaaat cgtaaaatgc attaaaaaca ctccgaaact aagcgtatgg tatagttatt
     1861 ttcatagtta aaattttcaa aagcaattct ttgaaattgg gttgcgtttt tctttagatc
     1921 tttaatttct ctactttttt gtctaaaagg gataaatttc
//
LOCUS       DARATF010000155         1861 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.155, whole genome shotgun sequence.
ACCESSION   DARATF010000155 DARATF010000000
VERSION     DARATF010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.155"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..663)
                     /locus_tag="SB502_001760"
     CDS             complement(<1..663)
                     /locus_tag="SB502_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435154.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEAEEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFENFVART
                     YQQ"
     gene            771..1133
                     /locus_tag="SB502_001761"
     CDS             771..1133
                     /locus_tag="SB502_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEG0435155.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFE
                     KILLCEKAMIEFYKPEKINIASFANYVPRVHFHVMARFKEDAFFPECMWGKQQRETIK
                     LDLPKFEEFVKFLNSKIF"
     gene            1207..1779
                     /locus_tag="SB502_001762"
     CDS             1207..1779
                     /locus_tag="SB502_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEG0435156.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
BASE COUNT          601 a          254 c          305 g          701 t
ORIGIN      
        1 ttgttgataa gttctagcga caaaattttc aaagtcttta tcaaaatttg aatttttatc
       61 gttgtttttt gaatctttat ctgttttttc taggctattt tctgaatttt tgtcatcttt
      121 ttctttattt tcttcttctt tttcttcggc ttcttcggct ttaagcttca ttgcttcagc
      181 tcttgcttca aattccattt ttgtagcatt tgctgcaact ttataatctt gcgggctagg
      241 atcagcagga gccatagctg ctgctgcaat ttgtcttgca ttggctatag tttcttctgg
      301 tgtgtttcct ttttgcatgc tgataggaac ttcacccgct gtagcataca tttgattatc
      361 agggcctctt gtataagtaa aacttgcagc acctgctaag ccgccgcccg ctgcttgatg
      421 cgcagcttca tgagccttta catttctatc gatactttgg agttcgcgaa cttgagctac
      481 ttctttttgg cttagctcta cgccattaac catttgggtt tgttcgccat ttttttcttt
      541 atcatcttta ttttcactaa gatttttttc atctttttga gtggaatcag attgatttgt
      601 tttatcaaaa gaaggtttgc tagagtagta atcataagag ttataacttg aactaatttg
      661 catttatcct cctttttgtt ttttaaattt ttaggaattt taacgcattt tgacttaaaa
      721 atttgataaa ttttgtaaaa taatcataaa tacaatttca aaggaatgta atgatttatg
      781 aaaatgattt gatttatata gagaaagagg aggctcaagt gccttggctt aaaattttta
      841 ctaaagaaat ttataaagaa tttagcgatt gtcctttaga gttgcaaaag gaactttttg
      901 aaaaaatttt actttgtgaa aaggctatga tagaatttta caaacctgaa aaaatcaata
      961 tcgcctcttt tgcaaattat gtgccaaggg tgcattttca tgttatggca agatttaaag
     1021 aagatgcgtt ttttccagag tgtatgtggg gaaaacagca aagagaaaca ataaagcttg
     1081 atttgcctaa atttgaagaa tttgtaaaat ttttaaatag taaaattttt tgatttttat
     1141 taatgatttg ttatgtttta tctaataaaa tttttatatt gaaaattact ataaaaaagg
     1201 aaaaaaatga aaaaagtttt attgagttca ttggttgcgg tgtctttgtt aagcacaggt
     1261 ttgtttgcta aagaatatac tttagataaa gcacatacag atgtaggttt taaaatcaaa
     1321 catttacaaa ttagcaatgt aaaaggaaat ttcaaagatt attctgcggt gattgatttt
     1381 gatcctgcga gtgctgaatt taaaaagctt gatgtaacta taaaaatcgc atctgtaaat
     1441 acagaaaatc aaacaagaga taatcactta caacaagatg attttttcaa agcaaaaaaa
     1501 tatcctgata tgacttttac aatgaaaaaa tatgaaaaaa tcgataatga aaaaggcaaa
     1561 atgacaggaa ctttaactat agctggagtt tctaaagata tcgttttaga tgctgaaatc
     1621 ggcggtgtag ctaaaggcaa agatggaaaa gaaaaaatag gattttcttt aaatggaaaa
     1681 atcaaacgct ctgattttaa atttgcgaca agtacttcaa ctattacttt aagtgatgat
     1741 attaatttaa atatcgaagt tgaagcgaac gaaaaataat tttttagtct aagagtcttg
     1801 ctcttagact ttgtaaattt ttatccaaat tttcttcact ttcttgccaa atcaatttaa
     1861 a
//
LOCUS       DARATF010000156         1815 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.157, whole genome shotgun sequence.
ACCESSION   DARATF010000156 DARATF010000000
VERSION     DARATF010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.157"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            77..1099
                     /locus_tag="SB502_001763"
     CDS             77..1099
                     /locus_tag="SB502_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0435157.1"
                     /translation="MNLSFKTFDISNTQRSKAKKVQGKKYEIFLNENEHSLITPKVSF
                     KEILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPVF
                     NTHASPISFINKAFKNAPVYNVNDFNEIFAVIITHSHFDHLDAKSVKALKEKARFFIT
                     PLKVGNYLKSYGVSEKKIIELDWWSGIEFGDLKIIATPAQHSSSRGDGKNKTLWASFV
                     MEFLSVDKRVFFSADGGYFTHFKKIGEYFGDFDLACLESGQFNIAWPYSHSFPEQILK
                     EAKDLNAKAVMPIHWGRFLAGTHAWNEVVKFLYENLDLPLITPKMGEAYEVGAKFKQD
                     FWWKEE"
     gene            1169..1510
                     /locus_tag="SB502_001764"
     CDS             1169..1510
                     /locus_tag="SB502_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEG0435158.1"
                     /translation="MKIIQWNGAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNALDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     VQRVNAVLKKP"
     gene            complement(1534..1761)
                     /locus_tag="SB502_001765"
     CDS             complement(1534..1761)
                     /locus_tag="SB502_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002868515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEG0435159.1"
                     /translation="MKIDVEGMEQEVILGCLNHIKTFKPILQIEIIKSNTRDIINILE
                     NLEYEIFQSGINILAIYKADPVINHLSSSNP"
BASE COUNT          653 a          224 c          307 g          631 t
ORIGIN      
        1 ctaaaaaatt agcaataaaa taaaattaat ctaaaaactt tttagatata atcttaataa
       61 acataaaagg aaaaatttga atttatcatt taaaaccttt gatatttcca atacacaacg
      121 atcaaaagct aaaaaagtgc agggtaaaaa atatgaaatt tttcttaatg aaaatgagca
      181 cagtcttata actcctaaag tgtcttttaa agaaattttg aggtattatt atctttatcc
      241 aaaaaatgcc atcccttctt ttaagttacc ttttttcaag cctgatttga gtggttttag
      301 cactccgcat attacttggc ttggacattc ttcgcttttt ataagtttta aagaatataa
      361 aattttgatc gatcctgttt ttaacactca tgcttcgcct atttctttta ttaacaaggc
      421 ttttaaaaat gctcctgttt ataatgtaaa tgattttaat gaaatttttg ctgtgattat
      481 cacgcattca cattttgatc atttagatgc taagagtgtc aaagctttaa aagaaaaagc
      541 acgatttttt atcacacctt taaaagtggg aaattatcta aaaagctatg gggtgagtga
      601 gaaaaaaatc atagagcttg attggtggag cggcatagaa tttggtgatt taaaaatcat
      661 tgcaacacct gcacaacaca gttcaagcag gggagatggt aaaaacaaaa ccctttgggc
      721 ttcttttgtg atggaatttt taagtgtaga taagagagtg ttttttagcg cagatggagg
      781 gtattttaca cattttaaaa aaataggtga gtattttgga gattttgact tagcttgtct
      841 tgaaagcgga caatttaata tcgcctggcc atattcacac tcttttcctg agcaaatttt
      901 aaaagaagca aaagatctta atgcaaaagc tgtcatgcct atacattggg ggagattttt
      961 agcaggaact catgcatgga atgaggtggt aaaatttctt tatgaaaatt tagatttacc
     1021 ccttatcaca ccaaaaatgg gcgaggctta tgaagtagga gctaaattta aacaggattt
     1081 ttggtggaaa gaagaataaa ttaacacaag tttataattt atattttggc ttttgctata
     1141 gttttataaa actaaaaaag gagattttgt gaaaatcatt caatggaatg gagcggaatt
     1201 tagcccaaaa gaagtgaaaa tcaatgtttt aattgataat gaaaaaggta aagaaattca
     1261 aattttatta gctaaagata gcgtgatgaa agagcataaa gctccttttg ctatacatgt
     1321 tcaagtttta agcggtaaaa tttggtttga agtggaaaag gaaaaatttg aattaaatgc
     1381 tttggatatg ataagcctag aggcaaatgt agcgcattct ttaggtggat tggaaaattc
     1441 tataataaga ttgagtttaa ataaatcaga tagtgttcaa agggtaaatg ctgtgcttaa
     1501 aaagccttag ccataagcct tttattttaa ggtttatggg tttgaagaac ttaaatggtt
     1561 aattacagga tctgccttat aaatagccaa gatattaatt ccggattgaa aaatttcata
     1621 ttctaaattt tctaatatat tgataatatc tcgagtgttt gatttaataa tttcaatttg
     1681 taaaataggt ttaaaagttt taatatgatt taaacatcct aatataactt cttgttccat
     1741 gccttctaca tctattttaa taagatctaa tcttttaaaa tttaaattat caagttttaa
     1801 ataaggaact ttttc
//
LOCUS       DARATF010000157         1761 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.158, whole genome shotgun sequence.
ACCESSION   DARATF010000157 DARATF010000000
VERSION     DARATF010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.158"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..1704)
                     /locus_tag="SB502_001766"
     CDS             complement(<1..1704)
                     /locus_tag="SB502_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEG0435160.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDRSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLNTEELDNVLNYAKSVFLKYFDELIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     ALKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQSYEKHLLLAYEFFLKEIEILN
                     HQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFEALLINKPILTKI
                     AK"
BASE COUNT          623 a          281 c          175 g          682 t
ORIGIN      
        1 ttttgcaatt tttgtcaaaa taggtttatt aataagcaaa gcttcaaact cataaacatt
       61 taattcattt aaaactcttt cataaatttc acttttttta ggataaaaaa gtacaaattc
      121 agaactatca agctcataaa gaacacggct ttcattgatt ttacgactaa aaaatgcaag
      181 gcttagtttt gtagcatttt cataatttgt aaaagcctta agatttaatt tttcaaaaaa
      241 taaatcaagt tctaaaatac ttttaaataa aagctcttta aaatctttca aaaagtactc
      301 atcacttgca ttgcaaaaag ctcttaattc actaaaattt ttatcacttt ggaaaatatg
      361 atctttttgt atgtttgaaa attctgcttt aaaaagtaaa atttctctct cgagtatgtt
      421 tataaagtct tttaatttca tcttgatttc ttcaaaagat ttataaagtt catttttgat
      481 ttttttaaac tctttactca ttacatcact attgtaaaac atcgccaaaa aagcatcgtc
      541 acttgaaata taaggtgctt tataatcata tcttgtgtat aaatctttct ttaaaaatcc
      601 tttgctttct ttgtaaaaat aagcatcttt ttccttaaca cttgcaaaaa tttcactaga
      661 aattctttcg ctaatgcttt taagctgttc taaaatctga tgatttaaaa tttcaatctc
      721 ttttaaaaaa aattcatacg ctaaaagtaa atgcttttca taactttgaa attgatttaa
      781 taaacgatca aaaataccta caaaaagttg attttcatct tctaaaattt cgcataaatt
      841 taaaattttt cttttaacaa atttttcttt taaagctgtt gtatctagct gagttaaaaa
      901 atcaagcaaa gattgaaaat tagatttttc atagctttgc tcatctttag cttctttgca
      961 agaaatggca ataagctcat caaaatattt taaaaataca ctttttgcat aatttaaaac
     1021 attatctagc tcttctgtgt ttaatttatc tttttgattt aatacacaaa tgctattttc
     1081 tcctaaaagt tctaaatttg cttttatggc atcttcttca ctttttttgc ctgcattatc
     1141 aatcaaactt aaccaaatcg ctccatgaat atttttaagc tcatcaagag ttgttaaagt
     1201 atcattttca tttgcattta aacccggagt atctacaaga gtgatttttt caagtaaagg
     1261 aataggtgca aaaatatgca aactttttgc ttgttttact tcatttcttt gatccgtata
     1321 aaaggctaat ttttctatat ttgtgataat atcacttcta tcttcaaatt ctactcttaa
     1381 aaaatattct tttgcatagc gtaaaaaagt aggtttaaaa gtaacaggaa caacacccgt
     1441 aggcaaacaa tcacacccca agatcaaatt tagtaaactt gatttaccac ttgaaaactg
     1501 ccctataata gcgatattaa cattcttatc caaagaaaat acaagctctt ttaattcatt
     1561 ttctaaagca taacttgcat gcataaaagg ctcattaagt tccttgcaaa gctcttgaat
     1621 acgcccttta aaactatcat caaaactcac actataagta ttttcatagg cttttataaa
     1681 atcatttaaa agattaatct gcatttaaaa gccccatttc aagttgtttt aatttttcaa
     1741 ttttttctaa attttcttca a
//
LOCUS       DARATF010000158         1615 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.159, whole genome shotgun sequence.
ACCESSION   DARATF010000158 DARATF010000000
VERSION     DARATF010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.159"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            431..1495
                     /locus_tag="SB502_001767"
     CDS             431..1495
                     /locus_tag="SB502_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEG0435161.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIDELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFKNNTIRNKLIIKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
BASE COUNT          651 a          187 c          215 g          562 t
ORIGIN      
        1 ataaaataat ttaattttta aatattcttt atagttttca agaaaagtaa aatataattt
       61 taatttacga aataaaatta tcaatttttt acattatatt ttatggataa gtttatttca
      121 ctcaaaaggt aaaatcataa aagtatgtaa aaatagtagc ttaatctata tcaaagtaga
      181 ataatctagg tgtatataaa aaagtttgaa aattaaagtt ttcaatataa aattataaat
      241 tttatatatt tttacctttt atcatatctt tttatgattg atataagatt tatttaataa
      301 aaatatttca atctttttgc cttgcatata aaaacaaact ttttcctaaa aaagcttttt
      361 tttactaagt taatactaaa ataccttttc tagttaaaaa gctaaaattt tagatttagg
      421 aaaagttttt atgaaatacc ctttagattg tgaagaaaat tttgaaaaat cattcttatt
      481 ttggttagca aaatatgtaa aatttaaact caactcacta tctaacaaag agttaaaaaa
      541 tccacaagct ttagcagaag ttaattttgc tcttacaaaa ggtgtaaaaa atattgatga
      601 acttgacgct ctagcaaaaa aagcaagaaa tgctggttta agtggagtta atacttattt
      661 taatccttta aaaaaagtat ttgaatattt aaatttttat aagctttact ctttaaaaca
      721 gattgatgaa gaactcattg tagaagtttt agcaagtata acaggtgctt tatcagatgc
      781 aagcaaaaaa aattaccgta ttgctgtgat taattttttt gattttttag acaagcaaaa
      841 tgaagaagat gaaaaagcac atattttcga tatcaatctt aaaaactggg caggtatagc
      901 aggttctaaa ggggtaaaat tacctgaatt tatgagtgaa gaagagctta aaaaatttct
      961 tgatgctatt gaaaatgcag attttaaaaa caataccata cgcaataaac ttattattaa
     1021 aatcatcatt tttacaggca tacgggtaag tgaagctatc aatatcaaaa tgggtgatat
     1081 tagcgaagaa aacgatcttt atatcataag aataagagct aaaggcaata aatatcgtgt
     1141 tgtaatgata aaaaaagaac ttatttacga tttgcttaaa aatgtaagta ttaattatat
     1201 gagtaaagac gccctacttt ttgtcaataa aaaaggcact ccactgactc aatcttatgt
     1261 tagtcgcata gtagaacagc ttttatttcg tgcaggaatt cgcaaacaaa aaaatggtgc
     1321 tcatatgttg cgtcatactt ttgccaccct gctttataaa aagcaaaaag atttagtttt
     1381 agttcaagaa gctttagggc atgcaagttt aaatacctca agaatttaca ctcattttga
     1441 taatgataaa ttaaaacttg ccgcacaggt tgcaaaggaa ttaagtgact cttgaaaact
     1501 atgctatttt tggtaaatat ttttaccatg atttaaaaca cactttaaaa gcctttaacc
     1561 acaaagaaag taaaaaatgc tttaaattta tagaaaaata taaaaatgat tttta
//
LOCUS       DARATF010000159         1565 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.160, whole genome shotgun sequence.
ACCESSION   DARATF010000159 DARATF010000000
VERSION     DARATF010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.160"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            114..1283
                     /locus_tag="SB502_001768"
     CDS             114..1283
                     /locus_tag="SB502_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEG0435162.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QTIKNAAISAIEKGCGKYTAVAGIPEVLKAIQTKFKKDNNLDYETNEIITNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSEDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGKCDKDIEKMRQAFEKRRNLALDMLKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMKFCQKLLEQEKVAVVPGIGFGTDGYFRLSYATSDELIEKGLERISHFIANYK"
     gene            1289..>1565
                     /locus_tag="SB502_001769"
     CDS             1289..>1565
                     /locus_tag="SB502_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEG0435163.1"
                     /translation="MKRPLPFILAATNNGSMIINHLDRHDTPQGSYGVGFQFLNYGSF
                     DPEEIDLCINLLKLRREYYKDNVFAIDCGANIGAHTIKWAIEMHNWGG"
BASE COUNT          574 a          236 c          273 g          482 t
ORIGIN      
        1 aattaataca aattttcaca tttattgaaa tttataactc atttttaaat taaatttatt
       61 gtaaaaatgc aattttctgc taaaattaaa caaaaattat taaggattga aaaatgctta
      121 caaaaagatc tcaagtttta gaagaatcta tcactttagc tatcactgca cttgccaatg
      181 aacttaaagc caaaggcgag gatatcatta gtttttcagc gggtgaacct gattttgaca
      241 caccacaaac catcaaaaat gccgctataa gtgctattga aaaaggatgt ggaaaataca
      301 ctgctgttgc aggaattcct gaagtattaa aagctattca aaccaaattt aaaaaagata
      361 ataatcttga ttatgaaaca aatgaaatca tcaccaatgt aggtgcaaaa cactctcttt
      421 ttgaatgtat agaatgctta gtagaaaaag atgatgaagt gattatccct agtccttact
      481 gggtaagcta tcctgaaatg gtaaaatttg caggtggaaa acctgtattt atagaaggct
      541 tagaagaaaa tggctttaaa attaccgctg aacaactaaa aaaagctatc acagctaaaa
      601 ccaaggtttt aatgttaaat tctccttcaa atcctgtagg atcgatttat tctaaagaag
      661 aattaactca aattgctaaa gttttagaag gaactcaaat taccgtttta agtgatgaaa
      721 tgtatgaaaa acttcgctat gatggttttg attttgtagc ttttgcaagt gtaagcgaag
      781 acgctttaaa acgtactgtg actattaacg gacttagcaa atgtggagct atgccaggat
      841 ggcgttttgg ctatatggca agcaaaaata aagccctaat ttcagccgtt aaaagacttc
      901 aaggacaaag cacttcaaat atttgctcca ttactcaaca tgcagccatt cctgctttaa
      961 atgggaaatg tgataaagat atagaaaaaa tgcgtcaagc ctttgaaaaa cgccgtaact
     1021 tagctttaga tatgcttaaa caaatcccaa atatcagtgt ttataaacca gaaggtgctt
     1081 tttatctttt tgtaaatata caaaaaatag aaaaagattc tatgaaattt tgccaaaaat
     1141 tacttgaaca agaaaaagtt gccgttgttc caggcatagg ttttggcacg gatggatact
     1201 ttagactttc ttatgccaca agcgatgaac tcatcgaaaa aggtttagaa agaataagtc
     1261 attttattgc aaattataag tagtttccat gaaaagacct ttacctttta tacttgcagc
     1321 tacaaataat ggatctatga ttattaatca tcttgataga catgatacgc ctcaaggaag
     1381 ttatggagtt ggttttcagt ttttaaatta cggcagtttt gatccagagg aaattgatct
     1441 ttgtattaat cttttaaaat tacgcagaga atactacaaa gataatgtct ttgccataga
     1501 ttgcggtgca aatattggag ctcacactat taagtgggct atagaaatgc ataactgggg
     1561 ggggg
//
LOCUS       DARATF010000160         1543 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.161, whole genome shotgun sequence.
ACCESSION   DARATF010000160 DARATF010000000
VERSION     DARATF010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.161"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(156..503)
                     /locus_tag="SB502_001770"
     CDS             complement(156..503)
                     /locus_tag="SB502_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435164.1"
                     /translation="MKKSILFTSALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGIPATPNTQAIPV
                     ARKIEIQCYKKAY"
     gene            complement(602..1175)
                     /locus_tag="SB502_001771"
                     /pseudo
     CDS             complement(602..1175)
                     /locus_tag="SB502_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343659.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1177..1500)
                     /locus_tag="SB502_001772"
     CDS             complement(1177..1500)
                     /locus_tag="SB502_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4878 domain-containing protein"
                     /protein_id="HEG0435165.1"
                     /translation="MACGSSNPEDLAKNFTKDLYSGNTKSVMSYIDLSEAKSDEEKTF
                     VSDKITQVVAENAAKAKRMGGVKNIQIEEKTINKDSAKIRVLVLFNNDNNQSSNVFLA
                     KKDRK"
BASE COUNT          547 a          199 c          215 g          582 t
ORIGIN      
        1 aataaaaatc cattttttca ttatttgcct tagatgaaaa tataagtgtt attttataaa
       61 ttgcttgtta aaaaagagtt taaattttta tttaagagta atgaagtagt ttgccgaaga
      121 atgattttta taaatccctt gttaagggat ttatattaat aagctttttt ataacattga
      181 atttcaattt ttctagctac tggaatagcc tgagtatttg gtgtagcagg tattccataa
      241 gaaattttac tttctaaaaa atttccaacc tgtaaatctt taaaagttcc atctttatct
      301 gttccaaaaa taccacaatc atccatttct atttcggtat ttggtagaac ttttatagcc
      361 atttgtccgc cataaataga gtcaataagc aaggttttat tgttatcata aatttgtgca
      421 atagtacctt caagttttag actatctgca aaaagcattg agctagctaa aagtgctgat
      481 gtgaataaaa tacttttttt cataattatt tctccttaat gtaaagtgat gacattataa
      541 aatttttaag tgaagtgaat gtgaaattaa aaatttttga ctttcataaa attaatacgc
      601 tttaattatt ttcaaaaaaa gcttgtggaa aaagatataa accttcatta aaaggagctt
      661 tgattagagt atattgaaga tgaaatgggg taatggagtt aatagattgt tctaaaaaaa
      721 gtagtgcagt aaaaagcatc tttatctgta cttatgataa attttctgcc taaatgttcc
      781 aaagctttag caactatttt ttgtttggtt ttttcatcaa attttaatct tttaatagca
      841 attttatgac tcagttttaa aaaatcatcc atagagctta agataacttg gtctttagca
      901 tttttgtcat catctgttgt agcatgtatg agtatagttg gagaagtttt aactagcata
      961 gcgatatgag aataagggct ttgacttaaa ttttctatta aaaaactttc acttcctatt
     1021 cctgcacgaa agacaagatc acctatttca agaaaaggta gatagggttt tttgatgatt
     1081 tgatttgaag gattggaatt tataaagaaa cccaaaattc caatcaataa aaataaaatt
     1141 aagaaaaaat ataaaatttt atttaagtaa aacaagctat tttctatctt ttttagcaag
     1201 aaaaacattg ctgctttgat tattatcatt gttaaataac actaaaactc tgattttagc
     1261 agaatcttta ttgattgttt tttcttcaat ttgaatattt ttaacaccac ccattctttt
     1321 tgctttggct gcattttcag caacaacttg agtgatttta tcactaacaa atgttttttc
     1381 ttcatcgctt ttagcttcgc taagatcaat gtaactcata acagatttag tattaccact
     1441 gtaaagatct tttgtaaaat ttttagctaa atcttcagga tttgaagaac cgcaagccac
     1501 taaaaaaagg caactaaagc caagaaagaa agtttaaaaa att
//
LOCUS       DARATF010000161         1506 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.162, whole genome shotgun sequence.
ACCESSION   DARATF010000161 DARATF010000000
VERSION     DARATF010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.162"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            38..178
                     /locus_tag="SB502_001773"
     CDS             38..178
                     /locus_tag="SB502_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435166.1"
                     /translation="MKTTEYNTQQKNNKEYLAEREAVKKNYGKNGKRVRKTCYKCGVS
                     KT"
     gene            185..473
                     /locus_tag="SB502_001774"
                     /pseudo
     CDS             185..473
                     /locus_tag="SB502_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887129.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
     gene            673..816
                     /locus_tag="SB502_001775"
     CDS             673..816
                     /locus_tag="SB502_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435167.1"
                     /translation="MCKDQEYIEQRKVLWEKSFEAFKDDKVYQKEQLELAEAGINDGL
                     EED"
     gene            complement(1370..>1506)
                     /locus_tag="SB502_001776"
     CDS             complement(1370..>1506)
                     /locus_tag="SB502_001776"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435168.1"
                     /translation="EMMIPAYKDEISNVAKENEKINQMIKLAIEKMFKNDFLNKINNF
                     "
BASE COUNT          593 a          171 c          211 g          531 t
ORIGIN      
        1 ttaggatatt aattgaaaga ataaagaggg tagtaaaatg aaaaccacag aatataatac
       61 gcaacaaaaa aataataaag aatatttagc tgagagagaa gcagttaaaa aaaactatgg
      121 caaaaatgga aaaagagtta gaaaaacctg ctataaatgc ggtgtttcaa agacttaaaa
      181 ataaatgaaa tatatagaac taagcgaagc tattgctata cacgaaaaga ttattgaaaa
      241 aacaggcgga ttaagtggtt ataatgaaac acaaagtagg atatttggct agtgcattag
      301 agtatataaa aaacgatgat tattatccta caataactga taaaattaca catttaatat
      361 tttcctgtgt aaaatttcat ccatttgctg atggaaataa acggacttcg atatttctag
      421 gtatgcactt tttagattta gataagattt taccaaagaa tatgaattca taggtagtcc
      481 tactttagat gatatagtaa aacacaaaca aagtgatgaa gtttttaaag tgttttataa
      541 aaaagatgat aaaataagat tgcttagagt tagtaatatg caagctttaa atcgttttga
      601 taaacttaaa ggtgcaatga caaaaataat tttagatagt ggttttaaac ctgataaata
      661 aaaaggatta atatgtgtaa agatcaagaa tatatagagc aaagaaaggt tttatgggaa
      721 aaaagttttg aagcctttaa agatgataaa gtgtatcaaa aagaacagct tgaacttgca
      781 gaagcaggaa ttaatgatgg cttagaggag gattaattat ataattagcc atatatttta
      841 tattagtttt tttaaaaaac cgtttttact atattcttta atcttttgta ttgtattttg
      901 attgtcttat ttatgtaatt ttatatataa aaaaagtttt ttccaatttt acaacaaaat
      961 cctttatggt ataataaaaa taaaaattat ataagaaagg atacaaatgg ctataaaaat
     1021 tgaaattagc ggatttgata aggatttttt acctgttttt gagagtttag ctaaaagctt
     1081 atctcaaaag cctattttat caatgttttt tcttattttt tgagcaaaaa cttacgcata
     1141 cccttttttc attttttgtt tctttaactt ctcaaaaaaa tttgtgcctc attaaaactt
     1201 ggaaatacat tattttttct tcctgtgcaa cttttaaaac gcacatttcc gtaaactctc
     1261 tcaaccatat attcctcaaa tagagtggta ataatttcta tgctataata gcgaatgttt
     1321 cctttctcag ttattctgtg caacaaaaca ttattcataa aaaacctaat taaaaattat
     1381 ttattttatt caaaaaatca tttttaaaca ttttttctat agcaagctta atcatttgat
     1441 taattttctc attttcttta gctacattag aaatttcatc tttgtaagca ggaatcatca
     1501 tttcta
//
LOCUS       DARATF010000162         1499 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.163, whole genome shotgun sequence.
ACCESSION   DARATF010000162 DARATF010000000
VERSION     DARATF010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.163"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(17..1363)
                     /locus_tag="SB502_001777"
     CDS             complement(17..1363)
                     /locus_tag="SB502_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEG0435169.1"
                     /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACILLI
                     LERLGFGVGVALGVKGGVFDIKTLVVFIKDGVKSVTDTAALFVFSILFFSVLNASGFF
                     TKILNAFLSKMKANVYQVCILTVFIAAAVHLDGSGASTFLIVIPALLPIYERLGIRKT
                     SMLLIITSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWI
                     AKIEIKRGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIIPSYICFM
                     IGLAIILPLNYPNLKTAKKVLDRASGGAMLMYITLIGAGILIGVFDKSGIMEKMGVLI
                     LNFVPDYLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIM
                     VIARNCATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
BASE COUNT          604 a          301 c          163 g          431 t
ORIGIN      
        1 agttctttta ttttaattat attatcccag ctacctcagc aaaaatcaag caaataatac
       61 ttatacccca tatataaaaa aagcttcttt tgatatgatc tttaatatta acctctgcta
      121 aaccacaacc tagcaaagtt gcaggcacaa caggagaaat aaatgtcgca caatttcttg
      181 ctatcaccat gataatagct atagtcaaag gttcagcgcc aaaagcctta gttacactca
      241 aaactatagg catcactcca taaaaataag aatctgtaca aaaaataatt gccattggaa
      301 cagccaatat ccctaccatc aaaggaatat aagcgcctaa ataatctgga acaaaattta
      361 aaatcaaaac acccattttc tccataatac cacttttatc aaatacgcct attaatatcc
      421 cagcaccaat taaagtaata tacataagca ttgcaccacc acttgcacga tctaaaactt
      481 ttttagctgt ttttaaatta ggataattaa gcggtaaaat tattgcaagt cctatcataa
      541 agcaaatata actaggaata ataccgctaa ttaaaagccc aataactcca atagctacaa
      601 gtaaatttaa ccaaaaccat ttttcattat ggtgttcgct tttttctata tttaaattta
      661 ttccagacaa gttacctgcg cctgcacctc tttttatttc tatcttagca atccaaattg
      721 ccaaaagaag ggataatacc aaacctacaa tctgaatagg tataatatgg tgccaaagca
      781 aatttgcatc cattcctata ttagtagccg ctcttaaagt aggaccaccc caaggaataa
      841 cattcataac ccccatagcc gaagtaataa tcaataacat tgaagtcttt cttataccta
      901 aacgctcata aataggtaat aatgcaggta ttacaataag aaaagtagaa gcacctgaac
      961 catctaaatg cacagcagca gcaataaaaa cagtaagaat gcaaacttga tatacattag
     1021 ctttcatttt tgataaaaat gcatttaaaa ttttagtaaa aaaaccactt gcatttaaaa
     1081 cactaaaaaa gagtatagaa aaaacaaaca aagctgccgt atccgttacg cttttgactc
     1141 catctttaat aaaaacaacc aatgttttaa tatcaaaaac acctccttta acccctaaag
     1201 ctacacccac gccaaaacca agccgttcaa gaataagtaa aatacaagct acactaatac
     1261 ttacacttat aaaagctagt gctggagtag tataatcttt tagcaaaagc caaactatca
     1321 atcctaacga gaaaaaaccc aataaagcta aaaaaatttc catatcctat ccttttgtat
     1381 catttttatt cgataataaa ataggatatt ttaactccaa cttatatgtg tttaaattta
     1441 tagcttttta aaaaaaatat attttctaat gtaaccatta taaacaagaa taaaaaaat
//
LOCUS       DARATF010000163         1433 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.164, whole genome shotgun sequence.
ACCESSION   DARATF010000163 DARATF010000000
VERSION     DARATF010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.164"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..987)
                     /gene="selD"
                     /locus_tag="SB502_001778"
     CDS             complement(<1..987)
                     /gene="selD"
                     /locus_tag="SB502_001778"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(937..939),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEG0435170.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDLNILKELLEGANDKVKECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMMELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFLDGVKEYFNMGLIPAGAYKNLEF
                     IKELTPDLNEEKLLLCDPQTSGGLLISISEKDSLECLKKLEDENIQAKIIAKV"
     gene            complement(997..>1433)
                     /gene="yedF"
                     /locus_tag="SB502_001779"
     CDS             complement(997..>1433)
                     /gene="yedF"
                     /locus_tag="SB502_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEG0435171.1"
                     /translation="LNSLNLNPVVDENAQEFCIKVQKKNFDSSKVNIHDYNVLFLKTD
                     KVGEGELGQNLLVGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGI
                     EIISCGACLEFFNKSKELKIGNIGNAYEILNELFGKAKIITL"
BASE COUNT          478 a          248 c          176 g          531 t
ORIGIN      
        1 aaccttagca ataattttag cttgaatatt ttcatcttct agttttttta aacattctaa
       61 ggaatctttt tcacttatag aaattaaaag tcctcctgaa gtttgtggat cacaaagtaa
      121 taatttttct tcatttaaat caggggtaag ttcttttata aattctaaat ttttataagc
      181 tccagcagga attaaaccca tattaaaata ctcttttact ccatctaaaa aaggaagttc
      241 actttcaaaa atttcaaaag aaatattttt atttagcatt tcttttaaat gtcctaaaag
      301 tccaaaacct gtaacatcac tcatggcact tggatgaaat ttaagagcaa tttgactggc
      361 tttataattt aactccatca tgtttttaag cattatatct aaatgttttt gatttaacat
      421 ttgcgccttt aaagctgtac ttaaaattcc tgttcctaaa ggcttggtta aaatgataca
      481 atctccgatt ttagaagtat tattagcaat aaatttacta ggatgtactt ttcctgtaac
      541 actaagtcca aaaaaaagct cggtgctttc tatagtatgg ccacccacga ctaaagcatt
      601 acattcttta actttatcat ttgcaccttc taaaagctct tttaagatgt ttaaatcatg
      661 attgcaagta tcaaaaccta ctatatttaa ggcattaatt acctctgcac ccatagcaaa
      721 aacatcgctt aaagcatttg ctgcagcaat agcaccaaaa tgataagcac tatctactat
      781 aggagtgata aaatcaagcg tttgcaccaa agctaaatca ggactgattt gatatacgct
      841 tgcatcttca ttatttccga tatcactaag taaagcagga gttttttgca tgaaatttaa
      901 aattgtttta agaccacccg ggcttaattt cgctgctcag cctgctgctt taacaaaatg
      961 cgttaaattt tgatttttat attgcagtgt ttttccttat agagtaatga tttttgcttt
     1021 accaaaaagc tcgtttaaaa tttcataagc attgcctata tttcctattt taagttcttt
     1081 gcttttatta aaaaattcta gacaagctcc acaacttatg atctcaatac ctaaattttc
     1141 aagttctttc atagctaaat gtgctttatg attttcatca acattgatta aaacactttc
     1201 atttacgcaa agaattttac ttggagcatg atctaaattt tttaaggtac ttaaaaatcc
     1261 tacaagtaaa ttttgtccca attcaccctc acccactttg tcggttttta aaaataaaac
     1321 attataatcg tgaatattta ctttactaga atcaaaattc tttttttgta ctttgatgca
     1381 aaactcttgt gcattttcat ctacaacagg gtttaaattt aaagagttaa gaa
//
LOCUS       DARATF010000164         1352 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.165, whole genome shotgun sequence.
ACCESSION   DARATF010000164 DARATF010000000
VERSION     DARATF010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.165"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..575)
                     /locus_tag="SB502_001780"
     CDS             complement(<1..575)
                     /locus_tag="SB502_001780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435172.1"
                     /translation="MFINYRNERIEFNLPFDWAKNPYKISSYPHHLMSLRWINEENFS
                     KEQIKIIILDFYDFHFVKKVLHPYYVKIQADHCTCIRLFKLYQIKDLFKDDDKIYNII
                     NNIIFRDLKFLQNKKVYRIGHNHGIMADTALLFFYNRCYKNNIFLLPILYRSYITFCM
                     MWNIFGETKEHSIGYQEFNLKQTLIYLKELNT"
     gene            complement(578..1321)
                     /locus_tag="SB502_001781"
     CDS             complement(578..1321)
                     /locus_tag="SB502_001781"
                     /inference="COORDINATES: protein motif:HMM:NF019552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEG0435173.1"
                     /translation="MKPDKDFLFLKNSGYAIVKDFDNKLNLVFKCKHISNYHRHDDDL
                     NFTLFYDNEEWFIDGGLYQYSEKDEFRKYLRSHLSHNLTYPKNFKAHRNLQKSLKTHI
                     NNLSSENIYKFEGYSYMFDGFENYRSIEYDKNKLIFTIIDRCKILNKNIAIENNITYV
                     TNFVIPKNKEIVIDKLNKCVKIIGKNKILHLIYQDNIDIHMEENYISRKINTKEKVNI
                     LKFIHNGIHLDTVFNLAYSNDFVNYNLGC"
BASE COUNT          518 a          172 c          103 g          559 t
ORIGIN      
        1 gtatttagtt cttttaaata tattaaagtt tgttttaaat taaattcttg atatccaata
       61 gaatgttcct ttgtttctcc aaaaatattc cacatcatac aaaaagtaat ataagaccta
      121 tataatattg gcaataaaaa tatattattt ttataacatc tattataaaa aaacaataat
      181 gcagtatcag ccattattcc gtggttatgt ccaattctat aaactttttt attttgaaga
      241 aattttaaat ctctaaaaat tatattattt ataatattat aaattttatc atcatcttta
      301 aacaaatctt taatttgata caatttaaat aatcttatac atgtgcaatg atcagcttgt
      361 attttaacat aataaggatg aagtaccttt ttaacaaaat gaaaatcata aaaatctagt
      421 ataatgattt ttatttgctc tttggaaaaa ttctcctcat ttatccatct taaagacatt
      481 aaatgatgtg gatatgagct aattttatat ggatttttag cccaatcaaa tggcaaatta
      541 aactcaattc gttcatttct ataattaata aacatgatta acaacctaaa ttataattca
      601 caaaatcatt agaataagct aaattaaaaa cagtatccaa atgtatacca ttatgaataa
      661 attttaaaat atttactttt tcttttgtat tgatttttct agatatataa ttttcttcca
      721 tatgtatatc aatattatct tgatatatta aatgcaatat tttatttttt ccaataattt
      781 ttacacattt attcaattta tcgattacaa tttctttatt ttttggaata acaaaattag
      841 ttacataagt aatattattt tcaatcgcta tatttttgtt taatatttta catctatcaa
      901 taatagtaaa aatcaactta tttttatcat attctatact tctataattt tcaaaaccat
      961 caaacatata agaatatcct tcaaatttat aaatattttc actagataag ttatttatat
     1021 gtgtttttaa ggatttttgc aaattcctat gagccttaaa gtttttagga tatgttaaat
     1081 tatgagaaag atgagatctc aaatattttc taaattcatc tttttcagaa tattgatata
     1141 aaccaccatc aataaaccat tcttcattat cataaaataa agtgaaattt aaatcatcat
     1201 catgtcgatg ataattgctt atatgtttac atttaaaaac taaatttaat ttattatcaa
     1261 aatcctttac aattgcatat cccgaattct ttaaaaataa aaaatcttta tctggcttca
     1321 agccttctct tccattactt attaaataaa ta
//
LOCUS       DARATF010000165         1325 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.166, whole genome shotgun sequence.
ACCESSION   DARATF010000165 DARATF010000000
VERSION     DARATF010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.166"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..>1325)
                     /locus_tag="SB502_001782"
     CDS             complement(<1..>1325)
                     /locus_tag="SB502_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435174.1"
                     /translation="EENLLSEISQIKEVVLSFKTSKFNLEYLLKLDFLKIFDLKINTH
                     YEINLSKQEILKEEIFKTKNSKMKLKSFELRALQCAFVMDEISHFVRKGLKPENIAVI
                     TPDESFCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFVYKNQEDYFE
                     DTQMIFDYHNTLLHSLKLDFIEFKKYFDEKCDFKYFEKLLALFLENEKQELIYLIRKE
                     LYFIKDLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILV
                     DFNEEFIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVEN
                     EEKSKSRFLDELDFDFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPILKHNPFEFP
                     LSCSRFNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEI"
BASE COUNT          487 a          211 c          139 g          488 t
ORIGIN      
        1 aatttcaagc attttatgga taaaatttcc ttgatttttc gctttgcttt cctcgcttaa
       61 aaccctaggt tctgctaaat ttaaaatata acgataataa taagttcttt tttgattttc
      121 caataaatta aaacgactac aagaaagcgg aaactcgaaa ggattatgct ttaaaatagg
      181 agcttttata ggagttagat taggttttat gccttcatag tctaatttta aagcattaag
      241 ataagctttt tggtggatat gagtttcata aaaaaagtca aaatcaagtt catctaaaaa
      301 acgtgatttg cttttttctt cattttccac aaagcaaata cttacttcta aagcattttt
      361 catcaagctt tcataataaa atctttgtaa attttctctt ctatcatagc taatcaatcc
      421 tgctttttta cgcacttcat tgtttaaaaa aagctcatta acacttcttt taggaataaa
      481 ttcttcatta aaatcaacca aaatcactcc atcaaaacaa agcccacgac tttctaaaag
      541 tcccattacc gtaaccttac ctccacctac atcactaagg gaaagttgtg aaatttgcat
      601 gaaaaaaaga tggatcaact ctttaagagt taaagactga tttttcaata aatctttaat
      661 aaaataaagt tcttttcgta tcaaataaat aagctcttgc ttttcatttt ctaaaaacaa
      721 agcaagtaat ttttcaaaat atttaaaatc acatttctca tcaaaatact ttttaaactc
      781 tataaaatca agttttaaag aatgtaaaag cgtattgtga taatcaaaaa tcatctgcgt
      841 gtcttcaaaa taatcctctt gatttttata gacaaaagaa gcactactag cactttcata
      901 aagtgcttga aatttttgat aaaacaaact ctctttaata ctaattccac ttgcaaagtt
      961 aagcatattg tctttatcaa aaagtcttaa aaactcacaa aaactttcat ctggagttat
     1021 aactgcaata ttttcaggct ttaaaccttt gcgtacaaaa tgtgaaattt catccataac
     1081 aaaagcacat tgcaaagccc ttaattcaaa agatttgagt ttcatttttg aattttttgt
     1141 tttaaaaatt tcttctttta agatctcttg ttttgaaaga ttgatttcat aatgagtgtt
     1201 tatttttaaa tcaaatattt ttaaaaaatc aagttttaaa agatattcaa gattaaattt
     1261 actcgtttta aaacttaaaa ccacttcttt aatctgagaa atttcactta ataaattttc
     1321 ttcaa
//
LOCUS       DARATF010000166         1313 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.167, whole genome shotgun sequence.
ACCESSION   DARATF010000166 DARATF010000000
VERSION     DARATF010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.167"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..389
                     /locus_tag="SB502_001783"
     CDS             <1..389
                     /locus_tag="SB502_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VgrG protein"
                     /protein_id="HEG0435175.1"
                     /translation="ANQNTIIHKDEIRNVKGNKKEVVEGHYNINISDKMQVLSEKEMD
                     YKSKDNILFTSNESIGFESDKNTSMVADNITTIHELKADSEATIQVGETIINAKPDCV
                     IIKAGGVEVIIDSNGLVVKGGELKAE"
     gene            400..1179
                     /locus_tag="SB502_001784"
     CDS             400..1179
                     /locus_tag="SB502_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435176.1"
                     /translation="MKKPFYKLKRFYIPCGVLIALIIFISLTYHFLQRPLELIFWDRY
                     YYEKEYQNAKDMYKLFKSNEEEFKKVFKEQNLNEELKTNQKELLNYMHHFKRDSNFMQ
                     ILGLDNAYLKALRDKTSIFGRKSENNLNYFYLASNSTTNLDEMNNFISIIDKYIIFIN
                     KIDTLPDTYTLMKIAFNADYFLFNLVPFASSLDKNFICSIPQKEQLLENMINSYEKMD
                     LLYKTKLKTEIQEMIYPAIYATKKLNHFIDIAKGRLNACGK"
     gene            1163..>1313
                     /locus_tag="SB502_001785"
     CDS             1163..>1313
                     /locus_tag="SB502_001785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435177.1"
                     /translation="MHVENNLSPEDRQGIENYLIILNTISFLGDLNIKYNNHNAKIKN
                     YSSGYC"
BASE COUNT          552 a          146 c          200 g          415 t
ORIGIN      
        1 gtgctaatca aaacactatt atccataagg atgagataag aaatgtgaag ggaaataaaa
       61 aggaggtggt tgagggacat tataatatta atatcagcga taaaatgcaa gtattaagcg
      121 agaaagagat ggattataaa agcaaagaca atattctttt tacaagtaat gaatccatag
      181 gatttgaaag tgataaaaat acaagcatgg tagctgataa tatcacaact attcatgagt
      241 taaaagccga tagcgaagcg actatacagg taggagaaac aattattaat gcaaaacctg
      301 attgtgttat cattaaagca ggtggagtag aagtaattat agactctaat ggacttgtgg
      361 ttaaaggtgg agagcttaaa gcagagtaaa ggataaacaa taaaaaaacc tttttacaaa
      421 cttaaaagat tttatatacc ttgtggtgtg cttatagctt tgattatttt tataagctta
      481 acttatcatt ttttacaacg acctttagag cttatctttt gggatagata ttattatgaa
      541 aaagaatatc aaaatgctaa agatatgtat aaactattta aaagtaatga agaagaattt
      601 aaaaaagttt ttaaagagca aaacttaaat gaagaattaa aaacaaatca aaaagaattg
      661 ttaaattata tgcatcattt caaaagagat tctaatttta tgcaaatttt aggtttggat
      721 aatgcttatc ttaaagctct tagagataag acaagtatat ttggaagaaa aagtgaaaat
      781 aatcttaatt atttttatct tgcttctaat agcactacta atttagatga aatgaataat
      841 tttataagca ttatagataa atatatcatt tttatcaata aaatagatac attgcctgac
      901 acttatacac tcatgaaaat agcctttaac gctgattatt ttctttttaa tctcgtccca
      961 tttgcttcaa gcctagataa aaactttatt tgctctatac cgcaaaaaga acaattatta
     1021 gaaaatatga taaattctta tgaaaaaatg gatttattat acaaaacaaa actaaaaacc
     1081 gaaattcaag aaatgatata cccagcgata tatgcaacaa aaaaacttaa tcatttcata
     1141 gatattgcca aaggaagatt aaatgcatgt ggaaaataat ttaagtcctg aagatagaca
     1201 aggtatagaa aattacctta ttattttaaa tacgataagt tttctaggcg atttgaatat
     1261 aaaatataac aatcataatg caaagattaa aaattattct agtggttatt gta
//
LOCUS       DARATF010000167         1218 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.168, whole genome shotgun sequence.
ACCESSION   DARATF010000167 DARATF010000000
VERSION     DARATF010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.168"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..122
                     /locus_tag="SB502_001786"
     CDS             <1..122
                     /locus_tag="SB502_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0435178.1"
                     /translation="APNYYIIISKNGFSKEIDKICEQNLLLLDLNDFKILLEE"
     gene            126..1145
                     /gene="flgS"
                     /locus_tag="SB502_001787"
     CDS             126..1145
                     /gene="flgS"
                     /locus_tag="SB502_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HEG0435179.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASCDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
BASE COUNT          446 a          150 c          216 g          406 t
ORIGIN      
        1 tggctccaaa ttattacatt ataatctcaa aaaatggttt tagcaaggaa attgataaaa
       61 tatgcgaaca gaatttgctt ttacttgatt tgaatgattt taagatttta ttagaggaat
      121 gataaatgaa tgaaagtatt ttaaaaagtt tagactcaaa tgaaaaagaa accctacaaa
      181 aaggcttaga aagtcttata gaacaaactt atgtaataga aaatgaatac aaaactttaa
      241 atgaaaacta taactcctta cgcgcaatgg ttgatgagat tatagaggtg ttgcctagtg
      301 cgctttggat tttagataaa gaaaaaaata ttattttaca aaatcaagaa gccttgaaaa
      361 atccaaaatt acttagtatc attagtcttg ataaaattcg tgatgagctt gaatttgaag
      421 gtaggtttta tgcggtaaaa atcatagcac ataatgaaaa aactatagtt tcagctacag
      481 atattagcga tgaaaaacgc aatgaaaggc ttgcaagcat gggtagtgta gcggctcatt
      541 tggcacatga gataagaaat cctattggat ctatatcttt gcttgcttca actctttttg
      601 ctcgtagtga gcttaaaaat aagcatatag ttcttgaaat ccaaaaggct attgctagag
      661 tagagcgtat cgtaaattca actttacttt ttactaaggg tgtgcacatc aatgctttaa
      721 attttaatct tttagagtta aaagaagagt gtgaaagtgc cattaactct tataatttca
      781 cttctcaaat agactttgaa atatcttttt tggataagca gatttgtgct gataaagctc
      841 ttcttggttt ggttttgcaa aatttgattt ataatgctat tgatgcgata gaagaaagcg
      901 aatgtgaaaa gcctatgatt aaaattttag caagttgtga taatgaaaaa atatgcatca
      961 gagtgtatga taatggttgt gaaataaaag atgagaaatt ggtttttgaa gcttttaaaa
     1021 caacaaaact taaaggcaat gggcttggct tgtctctttc taaagaaatc ataaacgccc
     1081 ataagggaga gttaagtttt caaagcgatc ctaagaattt ttattttacc ttacctttgg
     1141 tgtgataaat attttctttt caccccaaaa cgaaacagat tttgcttata ttattttaat
     1201 atatttagat tgaaggca
//
LOCUS       DARATF010000168         1130 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.169, whole genome shotgun sequence.
ACCESSION   DARATF010000168 DARATF010000000
VERSION     DARATF010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.169"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..297
                     /locus_tag="SB502_001788"
     CDS             <1..297
                     /locus_tag="SB502_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435180.1"
                     /translation="IKTKQQNSKLNNDYSSISIKDFESIINNIPLIKSTRLINILALS
                     LIAKELYTPIFEEMEENIFIKYIEAAIQNNIKEDKILFENLTIKALEKYIKDFE"
     gene            complement(301..>1130)
                     /locus_tag="SB502_001789"
     CDS             complement(301..>1130)
                     /locus_tag="SB502_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435181.1"
                     /translation="NEEYAYIYDEVSSHRGTLKSYSFFNEWELSALLLGNIKASPTAA
                     VGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKMIYDLHDHHY
                     ESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDVD
                     STSESRKEFDHYMDGYVNGMETRFDADIPNDWGDRQATLFKDTLVLSAKLAALTPPQG
                     YPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRYNFPQELRAKIRAYAKEHNIKE"
BASE COUNT          402 a          192 c          149 g          387 t
ORIGIN      
        1 attaaaacaa aacaacaaaa ctctaaatta aataatgatt attcttctat tagtatcaaa
       61 gattttgaaa gtattattaa taatataccc ttaatcaaat ccacaagatt gatcaatatt
      121 ttagccctta gcctaatcgc aaaagaatta tatactccaa tatttgaaga aatggaagaa
      181 aatatattta ttaaatatat tgaagctgcc atacaaaaca atatcaaaga agataagatt
      241 ctttttgaaa atcttaccat caaagcattg gaaaagtata ttaaagattt tgagtgattt
      301 ttactctttg atattatgct ctttagcata agctcttatc ttagctcgaa gttcttgcgg
      361 aaaattatat ctataaatag caggaattct tgggtcaaga agtttatcaa gcttatgtct
      421 tttataaata atttctagtc tttcagggct atagtatctt ggagcattag gatagccttg
      481 aggaggagtt aaggctgcga gtttggcgct taatactaga gtatctttga ataaagtggc
      541 ttgtcgatca ccccaatcat ttggaatatc agcatcgaat ctagtttcca ttccatttac
      601 atatccatcc atataatgat caaattcttt cctgctttca gaagtagaat ccacatctct
      661 tggatctttt aatttacctt tttcaatatc atcatataaa gcccaaatga ttctaccttc
      721 ttcatcaaga gcaaatttat atcgatttaa atcaatcacc caatctactc ctataatctc
      781 atctaaaaaa ggaagcatac caaattcatc taataaactc tcataatgat gatcgtgtaa
      841 atcataaatc atttttgctc taagcttatt ccaatgttgc cctgtaagaa aagaattaga
      901 acacaatact gctaaaccta aacttttaaa agcattttta tctccaagtt gagcttgtaa
      961 gaacaatgct tgttgttgtc ttgctttaaa tcctacagca gctgtaggac tagctttaat
     1021 atttcccaaa agtaaagcag ataattccca ttcattaaag aaagaataag attttaatgt
     1081 tccacgatga gaacttactt catcgtaaat ataggcgtat tcttcattga
//
LOCUS       DARATF010000169         1115 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.170, whole genome shotgun sequence.
ACCESSION   DARATF010000169 DARATF010000000
VERSION     DARATF010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.170"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>1115
                     /locus_tag="SB502_001790"
     CDS             <1..>1115
                     /locus_tag="SB502_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEG0435182.1"
                     /translation="NLEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLS
                     YGKSEEAKIYFWDKKEWQNILESSHFNADLKEFIDKLDKSVNIEDFIKDKPLIQNIAL
                     CELKNFSSAKNKISALIKKIEIKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLRE
                     SDFLIHLMNASQSLTQKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKE
                     SLKSRLVDLDENLVEKIDFLCVSAKMASDFYKGLAPKESLQKSGMQEFENYLFNELYA
                     GEKSKIALRAYKKELHLELKNILSKYEMQNRLIKENKQGVSEENQKLLLELQKQNILL
                     KEAQDEISNSIVKLKNIDNGIDNLVLLLAKKLKERLI"
BASE COUNT          449 a          112 c          192 g          362 t
ORIGIN      
        1 aaatttagag tttaatatag ccatcactgg cgtgatgaat gcaggaaaat caagtctttt
       61 aaatgctctt ttaaaagaag attttttagg ggtttcaaac atacctgaaa cagctaattt
      121 aacagtatta agctatggta agagtgaaga agcaaagata tatttttggg ataaaaaaga
      181 atggcaaaat atacttgaaa gttcgcactt taatgcagat ttaaaagaat ttattgataa
      241 gctggataag agtgtaaata tagaagattt tattaaagat aaacctttga tacaaaatat
      301 cgcactttgt gagcttaaaa atttcagttc tgctaaaaat aaaatttcag ctttaattaa
      361 aaaaatagaa attaaaagtc atttagaatt tttaaaaaat aatatttcta tagttgatac
      421 tccagggctt gatgatgttg tagttcaaag agaaattgtt acaaatgagt atcttagaga
      481 aagtgatttt ttaattcatt taatgaatgc ttctcaaagc ttaactcaaa aagatgcaga
      541 ctttttggtg cattgtcttt taaattcaag gctgagtaag tttttaattg ttttaactaa
      601 agcggatttg ttaagcaaaa aggatttaga agaagtcatt gtttatacca aagaaagctt
      661 aaaatcaaga cttgtggatt tagatgaaaa tttggttgaa aagattgatt ttttatgtgt
      721 gagtgctaaa atggcaagtg atttttataa gggtttagca cctaaggaaa gtttgcaaaa
      781 aagtggtatg caagaatttg aaaactatct ttttaacgag ctttatgcag gagaaaaaag
      841 caagattgcc ttaagagctt acaaaaaaga attacatttg gaacttaaaa atattctaag
      901 caaatatgaa atgcaaaatc gtcttattaa ggagaataaa caaggtgtaa gtgaagaaaa
      961 tcaaaagctt ttacttgaac ttcaaaagca aaatatctta ttaaaagaag cacaagatga
     1021 aatttcaaat tccattgtaa aacttaaaaa tatagataat ggtatagata atcttgtttt
     1081 acttttggct aaaaaattaa aagaacgctt gatag
//
LOCUS       DARATF010000170         1056 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.171, whole genome shotgun sequence.
ACCESSION   DARATF010000170 DARATF010000000
VERSION     DARATF010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.171"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            27..536
                     /gene="lolA"
                     /locus_tag="SB502_001791"
     CDS             27..536
                     /gene="lolA"
                     /locus_tag="SB502_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEG0435183.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSNFTQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLAAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDIFKAK
                     IPQNYDIVR"
     gene            complement(533..>1056)
                     /locus_tag="SB502_001792"
     CDS             complement(533..>1056)
                     /locus_tag="SB502_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435184.1"
                     /translation="EDIFTEIGKNNFKKTLEKFLDKKYKIELDDIYIISLSGVEKFDL
                     EEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPSVEKIPTPSVPNLEVKQVEQLF
                     KDPDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFKENNASKPYHLPQT
                     GYDIKLDENSTQN"
BASE COUNT          360 a          168 c          126 g          402 t
ORIGIN      
        1 aaaatatatt tttttaagga aaataaatga aaaaaacatt cttgatattt tttattttta
       61 taggacaact ttttgccctt gatcttaatt ttaatacctt ttcaagcaat tttacccaaa
      121 tagtgaaatc caaaaactct acactttctt attctgggca ttttatactg agcaaagatc
      181 aagcatattg gagttatgat actcctagta aaaaagagat ttatatcaac aaaaatcaag
      241 taaccatagt agagcacgat ctagaacaag tcattttctc tcatcttgat aacattccaa
      301 atcttaatga aattttcaaa aaagcaagtc ttatagataa ggataaactt gcagcaaaat
      361 atgataatat aaactataca attaagctta atcaagagca aattcaaagc atatcctata
      421 aagatgaatt tgaaaatgat gttataatca atctaaacaa tcaaattaaa aatccaaaaa
      481 tcaactccga tattttcaag gcaaaaattc cgcaaaatta tgatatagtt cgctaatttt
      541 gcgttgaatt ttcatcaagc tttatatcat agcctgtttg tggcaaatga taaggcttgc
      601 ttgcgttatt ttctttgaat atttgtggag gattggcgat taaatctctt ttaatttttt
      661 cttctatatc tggagtcatt ttaggtgtat ttaaattatc tatattgatt tctccattgt
      721 catttttatt ttcttcatct ggatctttga aaagctgttc aacttgcttg acttctaaat
      781 ttggaacact aggagttggg atcttttcaa cactaggaac ttgagtttta ggaacttcta
      841 agttttcaag tgcttttttt acctcgctac ccataccctt ctctttagcc tcagtacttt
      901 ctaaaaagcg tttaaactcc tctaaatcaa atttttccac tccgcttaaa gatatgatat
      961 atatatcatc taattcaatc ttatacttct tatctaaaaa tttttctaaa gtttttttga
     1021 aattattttt tccaatttct gtaaaaatat cttcgt
//
LOCUS       DARATF010000171         1040 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.172, whole genome shotgun sequence.
ACCESSION   DARATF010000171 DARATF010000000
VERSION     DARATF010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.172"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..778
                     /locus_tag="SB502_001793"
     CDS             <1..778
                     /locus_tag="SB502_001793"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435185.1"
                     /translation="GYKLLFYTEIKNGYVKVTLRPIVTLNQEGYCIKEGRRLSQNELF
                     ERATKDWLEKLYNQAHDPLVMNADGDWLDITNCYYSSKEKAKKGLNCQFYSNGKQFGI
                     DDIAKQINLNKSQEENMQKIMQGFSIVRPFEEEKILTDDLELKYSLLLQDRLGDFTFM
                     PYDIRFIVVGGDTGYYSKFGYSVFALMIQKYFIGNDHDFKFKKGTVEYWKNKDNKNNH
                     EYIYYPITNCGEVEMRYDFDPPGLYYQLFHDMQWRDEWHR"
     gene            766..>1040
                     /locus_tag="SB502_001794"
     CDS             766..>1040
                     /locus_tag="SB502_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435186.1"
                     /translation="MASLNLKGDYGVEILSYYLWGQSTPPSDLARKDNRVLIGKDYQA
                     RDEKEIIIQASALDYMKYVDRYTNATNFGIFQNFFKSVFSEKELGEF"
BASE COUNT          400 a          122 c          184 g          334 t
ORIGIN      
        1 cggatataaa ttactttttt ataccgaaat taaaaatggt tatgtaaaag tgactttacg
       61 tcctatagta acacttaatc aagagggtta ttgcataaaa gaaggtagaa gattaagcca
      121 aaatgaatta tttgaaagag ctactaaaga ttggcttgaa aaactttata accaagcaca
      181 tgatccacta gttatgaatg cagatggaga ttggcttgat atcactaatt gctattattc
      241 aagcaaagaa aaagcaaaga aaggtttaaa ttgtcaattt tacagcaacg gcaaacaatt
      301 tggtatcgat gatattgcaa aacaaattaa tcttaataaa agccaagaag aaaatatgca
      361 aaaaataatg caaggcttta gcattgtaag accttttgag gaggaaaaaa ttttaacaga
      421 tgatttagag cttaaatatt ctttactctt acaagatagg ttaggtgatt ttacttttat
      481 gccttatgat attagattta ttgtcgttgg tggtgatact ggttattatt caaaatttgg
      541 ttattctgtt tttgctttaa tgatacaaaa atattttatt ggaaacgacc atgactttaa
      601 atttaaaaaa ggcactgtag aatattggaa aaataaagat aataaaaaca atcatgaata
      661 catatattat cccattacaa attgtggcga agttgaaatg cgttatgact ttgatcctcc
      721 tggattatat tatcaattat ttcatgatat gcaatggagg gatgaatggc atcgttaaat
      781 ttaaaaggcg attatggagt agaaatttta tcctattatc tttgggggca aagcacaccg
      841 ccaagtgatt tagccagaaa agataaccgt gtgcttatag gtaaagatta tcaagcaaga
      901 gatgaaaaag aaataatcat acaagcttca gcacttgatt atatgaaata tgtagataga
      961 tataccaatg ctacaaattt tgggatattt caaaattttt tcaaaagtgt ttttagtgaa
     1021 aaagaacttg gggaatttaa
//
LOCUS       DARATF010000172          974 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.173, whole genome shotgun sequence.
ACCESSION   DARATF010000172 DARATF010000000
VERSION     DARATF010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.173"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..604
                     /gene="trmD"
                     /locus_tag="SB502_001795"
     CDS             <1..604
                     /gene="trmD"
                     /locus_tag="SB502_001795"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEG0435187.1"
                     /translation="FYNPRDFSKNSYHKVDDYKIGGGAGLLMQAEPMYEVLKSIQEKK
                     ENPYFIFLNPSGKTFNQKDAKRLSKKEHIVFVCGRYEGIDERVLEIFANEIFSIGDFI
                     LTGGELPALVMCDAILRNVNGVLGNMESLKEESFENNLLEAPAFSKPFIFEKKNKKFY
                     TPSEFLKGNHARIASLKTTLASCKTKFFRPDLFLEHERKK"
     gene            615..971
                     /gene="rplS"
                     /locus_tag="SB502_001796"
     CDS             615..971
                     /gene="rplS"
                     /locus_tag="SB502_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEG0435188.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKELKK"
BASE COUNT          351 a          112 c          196 g          315 t
ORIGIN      
        1 tttttataat ccaagagatt tttctaaaaa ttcctatcat aaagtcgatg attataaaat
       61 aggtggtgga gctggacttt tgatgcaagc tgaacctatg tatgaggtgc taaaaagtat
      121 tcaagaaaaa aaagaaaatc cctattttat ttttttaaat ccaagtggta aaacctttaa
      181 tcaaaaagac gccaaacgct taagtaaaaa agaacatata gtttttgtat gtgggcgcta
      241 tgaaggtata gatgaaagag tgcttgaaat ttttgcgaat gaaattttta gtatagggga
      301 ttttatttta acaggaggag aattacctgc gcttgtaatg tgtgatgcga ttttaagaaa
      361 tgttaacggg gttttaggaa atatggaaag cttgaaagaa gaaagctttg aaaataattt
      421 actcgaagcg cctgcttttt caaaaccttt tatttttgag aaaaaaaata aaaaatttta
      481 tactccttca gagtttttaa agggtaatca cgctagaatt gcaagtttaa aaactacttt
      541 ggcgtcttgc aaaacgaaat tttttcgtcc agatttattt ttagagcatg aacgcaaaaa
      601 ataagggatt ttttatgaaa aataaatata tagaacaatt tgaagcaaaa caaattgaag
      661 gtaaaaatgt tccagatttt cgtgctggtg atactttaaa gcttgcaatt cgcattaaag
      721 aaggggataa aacaagaatc caaaattttg agggtatttg tattgctaga agaggtaatg
      781 gcgtaagtga aacttttatc gtgcgtaaaa ttggcgctaa taatgttggc gttgagagaa
      841 ttttccctat ttatagtgaa agtttagaaa gtattactgt tttgcgtcgt ggtcgtgtac
      901 gccgtgcaag attattctac ttaagagata gacgtggtaa agcagcgcgt attaaagagc
      961 ttaaaaaata attt
//
LOCUS       DARATF010000173          925 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.174, whole genome shotgun sequence.
ACCESSION   DARATF010000173 DARATF010000000
VERSION     DARATF010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.174"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..427
                     /locus_tag="SB502_001797"
     CDS             <1..427
                     /locus_tag="SB502_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435189.1"
                     /translation="LFKDFIEYKQNKEIQNKNFIIQEEISKLKQDKQKLLTNIQDLNF
                     TLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNDLKITNLEFEQTKII
                     LSFIDENHFKRALENLNSAFKILDKNEETFNIILEVIHE"
     gene            420..>925
                     /locus_tag="SB502_001798"
     CDS             420..>925
                     /locus_tag="SB502_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435190.1"
                     /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDHFLEDIFQ
                     KTLVEHNYLALNEAKIENSHLKEIETKLTKQIKIEEEKLKYYKEKLHLFSYDKDFFNK
                     KINNLSKNLIINEIKFSQENKNFIHYNYVSLSLNGNFKDLLNFIQNLENLPIALKIDK
                     IKLYNTQG"
BASE COUNT          421 a          121 c           79 g          304 t
ORIGIN      
        1 attatttaaa gattttatag agtacaaaca aaataaggaa attcaaaata aaaattttat
       61 catacaagaa gaaatttcta aactaaaaca agataagcaa aaattattaa caaacataca
      121 agatttaaac tttactcttt ccaataaaat atcatctaca caacaacaat ttcatatttt
      181 atccaccata acaaaagaaa tcaatttaga caaaaataag gcaatcattc taaatcaaat
      241 catatcatgg cttaactcca atgaccttaa aatcacaaat cttgaatttg aacaaacaaa
      301 aatcattctt tcttttatcg atgaaaacca ctttaaaaga gcattagaaa atctaaattc
      361 tgcttttaaa attcttgata aaaatgaaga aacatttaat atcatattag aagtcataca
      421 tgaataaaat agaagtattt ttgcagaatt taaatcctag ggaaaaattt ctttttattt
      481 cttttatctg tctttgtgct ttgtttttag cttttaaaat tcacgatcac tttttggaag
      541 atatttttca aaaaacatta gtagaacata attaccttgc attaaatgaa gcaaaaatag
      601 aaaattcaca tcttaaagaa atagagacaa agctaacaaa acagataaaa atagaggaag
      661 aaaaattaaa atactataaa gaaaaattgc atttattttc ttatgataaa gattttttca
      721 ataaaaaaat caataattta tccaaaaatt taatcattaa tgaaataaaa ttttcccaag
      781 aaaacaaaaa ttttattcac tataattatg tttctctaag tttaaatggc aactttaaag
      841 acttactcaa ttttatacaa aatttagaaa atcttcctat agctttaaaa attgataaaa
      901 taaaactata caatacacag ggttt
//
LOCUS       DARATF010000174          915 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.175, whole genome shotgun sequence.
ACCESSION   DARATF010000174 DARATF010000000
VERSION     DARATF010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.175"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>915
                     /locus_tag="SB502_001799"
     CDS             <1..>915
                     /locus_tag="SB502_001799"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435191.1"
                     /translation="YKKSVKITQDLWSDKNLDKTILSKHTLAILQKYYDDNKEILDND
                     LLTKAINYLKADLDNLKLIELIQLLYCSLLFYKKIDTDIIFKLNKQLLECPINNLDQE
                     TVNCICEIYNKYITNNNIVQDTILYDKNTGQAYISKSYYNKIDPSYNYISIIDSFEFD
                     LKLKDDNYIKYSIFFDIYCTIISQKNLPNVSKINIDNNNPLEFFREVFNNITFPIEQE
                     RKKLIWQFNNQNCYLFHLKNSLGLDYIELIPMLIEDEDINFHSNNCIPYSGSKILTFS
                     SIVLLQHINKLDIVLQRKNIFIPKSIIL"
BASE COUNT          386 a          100 c          100 g          329 t
ORIGIN      
        1 aatataaaaa aagcgtaaag attacgcaag atctttggag tgataaaaat ttagataaaa
       61 caattctatc taaacacaca ttagctattt tgcaaaaata ttatgatgat aataaagaaa
      121 ttcttgataa tgatttactc acaaaagcta tcaattattt aaaagccgat cttgataatc
      181 taaaattaat agaacttatt caattgttat actgttcttt gctattttat aaaaagatag
      241 atacagatat aatttttaaa ttaaataagc aacttttaga gtgtcctata aataatttag
      301 atcaagaaac tgtcaattgt atttgtgaaa tatataataa atatattaca aataataata
      361 tagtccaaga tacaatttta tacgataaaa atacaggaca agcatacata agtaagagtt
      421 attataataa aattgatcct tcttataatt atatcagtat aatagatagt tttgaatttg
      481 atttaaaact aaaagatgat aattatatca agtactcaat atttttcgat atctattgca
      541 cgataataag tcaaaaaaat cttcctaatg tttctaaaat taacatagat aacaacaatc
      601 ctttagagtt ttttagggag gtatttaata atataacttt tcccatagaa caagaaagaa
      661 aaaagcttat ttggcaattt aataatcaaa attgctacct atttcatcta aaaaatagtt
      721 tagggcttga ttatatagaa ttaattccta tgcttataga agatgaagat attaattttc
      781 actcaaataa ttgcattcct tatagtggaa gtaaaatatt aactttttct tctattgtat
      841 tattgcagca tattaataaa ctagatattg ttttacaaag aaaaaatatt tttataccaa
      901 aaagcattat tcttg
//
LOCUS       DARATF010000175          877 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.176, whole genome shotgun sequence.
ACCESSION   DARATF010000175 DARATF010000000
VERSION     DARATF010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.176"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            137..271
                     /gene="rpmH"
                     /locus_tag="SB502_001800"
     CDS             137..271
                     /gene="rpmH"
                     /locus_tag="SB502_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEG0435192.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            268..594
                     /gene="rnpA"
                     /locus_tag="SB502_001801"
     CDS             268..594
                     /gene="rnpA"
                     /locus_tag="SB502_001801"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEG0435193.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            591..>877
                     /gene="yidD"
                     /locus_tag="SB502_001802"
     CDS             591..>877
                     /gene="yidD"
                     /locus_tag="SB502_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEG0435194.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKGGFDYPRVSKNFYPINLCFKPIFLAEKQLCFLYIP"
BASE COUNT          322 a          104 c          137 g          314 t
ORIGIN      
        1 tgacattttt aaccttttaa aaataatttc aaaatttatc aaaagaattt aaaaattact
       61 cttaatcaaa agcaatttat aagtaagatt aagataaaat acaagtttat tttataattt
      121 tttaaggaaa aatcaaatga aaagaactta tcagccacat ggcactccaa gaaaacgtac
      181 tcatggtttt cgtgttcgta tgaaaactaa aaatggtcgc aaggtgatca atgcaagacg
      241 tgctaaaggt agaaaaagac ttgctgtgtg aaaaattttg ataaatttag cacaaacgag
      301 gaattttcat ctgtatataa agtaggtaaa aaatggcatt gcgaaggtgt gattattttt
      361 tatctgaata gttatgaaaa aaaaatagca gttgttgcta gtaaaaaagt tggaaaagca
      421 gtggttagaa atcgttcaaa acgaatttta agggctttgt ttgctaagtt tgaaagatat
      481 cttcaagatg gcaaatatat ttttgtagct aaaaatgaaa tcactgaact ttctttttct
      541 aggttagaaa aaaatctaaa atggggattg aaaaaactag aatgtttcaa atgatatgcc
      601 taaaaatact ccgtttttat cagaaattct taagcccttt aaaacccgct gcttgtaggt
      661 attatcctag ttgttctgag tatgcgcttt ggcagtttca aaaaaagaat ttttttctag
      721 cttttttttc tacttttttt agaattttaa gatgcaaccc tttttttaaa gggggttttg
      781 attatcctag agtttctaaa aatttttatc ctataaattt atgttttaag cctatatttt
      841 tagcagaaaa acaactttgt tttttatata tacctta
//
LOCUS       DARATF010000176          779 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.177, whole genome shotgun sequence.
ACCESSION   DARATF010000176 DARATF010000000
VERSION     DARATF010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.177"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            66..>779
                     /locus_tag="SB502_001803"
     CDS             66..>779
                     /locus_tag="SB502_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435195.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDKDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLRLDWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFITTSKEGVASVNFKIISTSNGKILAAKNAKLNL
                     ILKDQDTKQNYQDIVNQMPK"
BASE COUNT          303 a           77 c          118 g          281 t
ORIGIN      
        1 ggaatttttt acaagatttt ttataaaata aagagtataa ttttatattt aaatagttta
       61 taaggatgaa gatgaggtat tgtttcattt tgtttttaag tttagtttta agttctaatc
      121 ttttagcgaa taatttttct cagaaaaaag ttattaaaat tgaaaaaagc gcagatagtt
      181 ttgaagtaat agatctaaat caaaatgttg caaatccaaa tctaaatcaa caaaaagcat
      241 tgtttgatag ttctaccttg attgaaaaaa aatcgcaaat caccaaagat aaagatattg
      301 attttgccat tgtattaact tctaggaaaa attttggtta ttttttagat ggttttaggg
      361 tgagtgataa ggaattttct acattatttg ctaaaaattt gattcaaagt ttaaggcttg
      421 attgggttaa ttctgctgca aatggtattt atcaaagtcc taaaactttg tcatatttta
      481 gccctaagga tgcaaaactt ataaatgtca gtcctttttt aacacaagaa aaagataagg
      541 ctaaaatgta tgccaaattt acagattatg ttgtggtggt aaatttgcaa gatttttatg
      601 taaatattac aaattatttt atcacaacta gtaaagaggg tgtggctagt gttaatttta
      661 aaattatttc tacaagcaat ggaaaaattc ttgcagcaaa aaatgcaaaa ttaaatttga
      721 tattaaaaga tcaagataca aaacaaaatt atcaagatat tgtaaatcaa atgccaaaa
//
LOCUS       DARATF010000177          681 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.178, whole genome shotgun sequence.
ACCESSION   DARATF010000177 DARATF010000000
VERSION     DARATF010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.178"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..315)
                     /locus_tag="SB502_001804"
     CDS             complement(<1..315)
                     /locus_tag="SB502_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435196.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQD
                     GQS"
     gene            complement(476..>681)
                     /locus_tag="SB502_001805"
     CDS             complement(476..>681)
                     /locus_tag="SB502_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435197.1"
                     /translation="VQNQITSTINNITVTQVNVKSAESQIRDVDFASESANYSKANIL
                     AQSGSYAMAQANSSQQNVLRLLQ"
BASE COUNT          200 a          121 c          119 g          241 t
ORIGIN      
        1 gctttgacca tcttgagcag cttgagtcgc tttagtcttg atggtatcta agattttaag
       61 ttgctcatcc atagccttat ctgcagtttg caagatacct atagcatcat taccattgtt
      121 tatagcttga cctaaagttg ctgcttgtga acgcaaagaa tctgctatcg ccatccctga
      181 agcatcatct gctgcggagt tgattctaag acctgaactg agtctactta aagacttgtc
      241 aagctctcta gcattaacaa ctgaatttgc atgtgcgttc aatgcaccga tgttggtgtt
      301 tattctaaaa cccattttaa atcctttcaa aatattgcat cgaaaagatt aaagcaagaa
      361 gtgttccaag ttttgattca aattgaaatt ttatttagaa ataaaaaaag cctagtatta
      421 ctactaggct tggatttgta taaattacag taaacgctaa agaatgtttt atatactact
      481 gtagtaatct taaaacattt tgctggcttg aatttgcttg agccatagca taagaaccac
      541 tttgagccaa tatatttgct ttagagtaat ttgcactctc gcttgcaaaa tctacatctc
      601 tgatttgtga ttctgctgat ttaacattta cctgggttac agtaatgttg tttatagtcg
      661 atgtgatttg attttgcaca g
//
LOCUS       DARATF010000178          665 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.179, whole genome shotgun sequence.
ACCESSION   DARATF010000178 DARATF010000000
VERSION     DARATF010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.179"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            77..>665
                     /locus_tag="SB502_001806"
     CDS             77..>665
                     /locus_tag="SB502_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435198.1"
                     /translation="MKKYFNIFKIFTNKTNAKFGLGVCSVVLSSSVCFAAVQATSKDG
                     KIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIHNNPKSGNKNLS
                     KLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVIAYAQNTNATNNKLILEN
                     GELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAF"
BASE COUNT          237 a           92 c          105 g          231 t
ORIGIN      
        1 ctcaggacat acgggatagt gttgcaaata atcaatttgc gataaatcaa aaggttttat
       61 tttagtgaga aatgagatga aaaaatattt taatattttt aaaattttta caaataagac
      121 aaatgcaaaa tttggcttgg gcgtttgtag tgtggtttta tcttcttcgg tttgttttgc
      181 ggcggttcag gctacaagca aggatggaaa aattttttat atttctgaac attcttttaa
      241 ggataatcaa gtttatgatc ctcaagcaga aatttttaaa aaaattaatg gaaaaaattt
      301 ctatgcttct aagtcaaaat accctatatc aaatttaact atgattcata ataaccctaa
      361 atctggaaat aaaaatttat ccaagcttga aattttaact ccggatactt caaaagaaga
      421 gatcataaca gcttttagca ctttaggaac cgtatcttca gatactcaag ccgttcctag
      481 ttcttttata ccttttattg taatagctta tgctcaaaat acaaatgcaa caaataataa
      541 acttatatta gaaaatggag aattatcttc tgtgtatttt tgcaaaccaa gcatagggga
      601 ttgtggagta cctaataatt ctcaaaaagg cgatcgtttt aagtatttaa ttactgcggc
      661 gttta
//
LOCUS       DARATF010000179          569 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.180, whole genome shotgun sequence.
ACCESSION   DARATF010000179 DARATF010000000
VERSION     DARATF010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.180"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>569
                     /locus_tag="SB502_001807"
     CDS             <1..>569
                     /locus_tag="SB502_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEG0435199.1"
                     /translation="DFANALANESGKLQTAVQSLTTSSNSQAQSLEETAAALEEITSS
                     MQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQKSLSEIEANTNLLVQSINDMAESIKEQTAGITQINDSVAQIDQTTKDN
                     VEIANESAIISSTVSDIANNILEDVKKKR"
BASE COUNT          208 a           83 c          104 g          174 t
ORIGIN      
        1 cagactttgc taatgcttta gctaatgaaa gtggaaaatt acaaactgct gttcaaagct
       61 taaccacttc ttcaaattct caagctcaat ctttagaaga aactgcagca gctttagaag
      121 agatcacttc ttctatgcaa aatgtttcag ttaaaactag tgatgttatc actcaatctg
      181 aagagattaa aaatgttaca ggtattatag gtgatattgc agatcaaatc aatcttttag
      241 ctttaaatgc agctattgaa gcagctcgtg ctggagaaca tggtagaggc tttgctgttg
      301 tggctgatga agttagaaag ttagctgaaa gaactcaaaa gtctttatca gaaattgaag
      361 ctaatactaa tttacttgtt caatctatca atgatatggc agaaagtatt aaagaacaaa
      421 ctgcaggtat cactcaaatc aatgatagcg tagctcaaat tgatcaaact actaaagata
      481 atgttgaaat tgctaatgaa tcagctatta tttctagtac agtaagtgat atagctaata
      541 atatcttaga agatgttaag aagaagagg
//
LOCUS       DARATF010000180          567 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.181, whole genome shotgun sequence.
ACCESSION   DARATF010000180 DARATF010000000
VERSION     DARATF010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.181"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>567
                     /locus_tag="SB502_001808"
     CDS             <1..>567
                     /locus_tag="SB502_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006751.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435200.1"
                     /translation="TGSIGVGAGILHTENYGRLSLVKNDGRDINISGTGLSAIGMGAT
                     DMISQSSVSLRESKGQISAANADAMGFNAYNGGGAKQIIFASSIAGFMSQAGSGFSAG
                     SGFSVGSGKNYSAILSASIQIVSSAASISSTYVVSAGSGFSAGSGNSQFAALRISTVS
                     AHDETAGVTTLKGAMAVMDIAETAITNLD"
BASE COUNT          157 a           93 c          133 g          184 t
ORIGIN      
        1 acaggtagca taggtgtagg agctggtata ttgcacactg aaaattatgg aaggttatct
       61 ttagttaaaa atgatggtag agatatcaat ataagtggaa caggtctttc agctataggt
      121 atgggtgcta cagacatgat ttctcaatct tcagtatctc taagagagtc aaaagggcaa
      181 atttcagcag ccaatgctga tgctatgggc tttaatgctt ataatggcgg cggcgctaag
      241 caaattattt tcgcttctag tattgcagga tttatgtctc aggctggttc aggcttctct
      301 gctggttcgg gattttcagt aggtagtggt aaaaattatt cagccatttt atcagcttct
      361 atacagatag tatctagcgc agcttctatc agtagcacct atgttgtttc tgctggttca
      421 ggtttctctg ctggttcagg taattctcaa tttgcagctt taagaataag tacagtaagt
      481 gctcatgatg aaactgcagg tgtaactaca cttaagggtg caatggctgt gatggatata
      541 gcagaaactg ctattaccaa tcttgat
//
LOCUS       DARATF010000181          559 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.182, whole genome shotgun sequence.
ACCESSION   DARATF010000181 DARATF010000000
VERSION     DARATF010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.182"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>559
                     /locus_tag="SB502_001809"
     CDS             <1..>559
                     /locus_tag="SB502_001809"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435201.1"
                     /translation="YMNNKDELFNHFYFSYIDIVKNDIDHNIIQDKILETKDFKLMYD
                     YITYCDIHKDKKAHSFLSSNYKLLDEHNLIFYFIKICLDKKFEITQEIKHFIANKSES
                     NIVYYFLNLKLKKIASNDELEKLYSKLDITLSCEFIKDIILFFQEQNFNSWTDIILKF
                     KDKYNGLVELALSYFYNNININQFEN"
BASE COUNT          246 a           47 c           57 g          209 t
ORIGIN      
        1 ttacatgaat aataaagatg aactttttaa ccatttttat ttttcatata ttgatattgt
       61 aaaaaatgat atagatcaca atataataca agataaaatt ttagaaacta aagattttaa
      121 attaatgtat gactatatta catattgtga tatccataaa gataaaaagg cacatagctt
      181 cttatctagc aattataaat tattagatga gcataactta atattttatt ttataaaaat
      241 ttgtctcgat aagaaatttg aaataacgca ggaaataaaa cattttatag caaataaatc
      301 agaatccaac atagtgtatt attttttaaa tttaaaatta aaaaaaatag cttcaaatga
      361 tgaattagaa aaattatatt ctaagctaga cataacttta agttgcgagt ttataaaaga
      421 tataatattg ttttttcaag agcaaaattt taattcttgg acagatataa ttttaaaatt
      481 taaagataaa tataatggat tagtcgaatt agctttatct tatttttata ataatattaa
      541 tataaatcaa ttcgaaaat
//
LOCUS       DARATF010000182          529 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.183, whole genome shotgun sequence.
ACCESSION   DARATF010000182 DARATF010000000
VERSION     DARATF010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.183"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            135..338
                     /locus_tag="SB502_001810"
     CDS             135..338
                     /locus_tag="SB502_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435202.1"
                     /translation="MLLNTPCRGIVDTNFESKRISITSTLKFQEKKEKVEAKAEKEEA
                     NKDNSNSTNTNTNKKDKLLDISA"
BASE COUNT          249 a           67 c           61 g          152 t
ORIGIN      
        1 aaatggttga tacttttaga agcaaatgaa atagataaaa ttttacttca ataaatttaa
       61 gttttatctt attttataca atttttaata taatctaaaa ttataatttt aaatgagaaa
      121 tcaggagctt gctaatgtta cttaacacgc cttgcagggg aatagtagat acaaattttg
      181 aaagcaaaag aattagcata acttcaactt taaaatttca agaaaaaaaa gaaaaagtag
      241 aagctaaggc tgagaaagaa gaagcaaata aagacaatag caattctaca aacacaaata
      301 ccaataaaaa agataaactt ttggatatat ctgcttagtc taaaatatac tataactata
      361 tctccttaaa gaatacgcaa taaatgattt tttgatttta ttaagctttt aaaacatcga
      421 aaaaaggaaa aattaaaaaa cacaaaaaca atatcccaaa gtccatagct tagaagaaga
      481 ccttgcgata cttaaaaaca acccatatta aatcacaaaa ataaaatat
//
LOCUS       DARATF010000183          518 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.184, whole genome shotgun sequence.
ACCESSION   DARATF010000183 DARATF010000000
VERSION     DARATF010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.184"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            7..>518
                     /locus_tag="SB502_001811"
     CDS             7..>518
                     /locus_tag="SB502_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEG0435203.1"
                     /translation="MKKILLFILSLGIFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFF
                     VKKIAANTLDVNVILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQN
                     FSKLQIVNMQKNIALIQTHDTHEHSHEHEHHEHEHFDPHTWLDPILVQTMALNIYDTL
                     IQKYPQNENL"
BASE COUNT          206 a           79 c           61 g          172 t
ORIGIN      
        1 aatattttga aaaaaattct attatttatt ttatctttag ggatatttta tactttcaca
       61 caagctaaaa atttagagca agaacaaaat actagtagca atttagttag tgtcagtata
      121 gcacctcaag cattttttgt taaaaaaata gctgcaaata ctctagatgt caatgttatt
      181 ttgcccccaa atagcaatga gcataatttt gaatttaaac caagtactat gaaaaaactt
      241 gaaaaaagtg atatttattt cactataggc ttagaatttg aaaaagtttt tacggataaa
      301 tttaaacaaa atttttcaaa acttcaaatt gtaaatatgc aaaaaaacat agctttgatt
      361 caaactcatg atacacacga acactctcat gagcatgaac accacgaaca tgagcatttt
      421 gatcctcata cttggctaga tcctatttta gtccaaacta tggctttaaa tatttatgac
      481 accttgattc aaaaatatcc acaaaatgaa aatttata
//
LOCUS       DARATF010000184          512 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.185, whole genome shotgun sequence.
ACCESSION   DARATF010000184 DARATF010000000
VERSION     DARATF010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.185"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(188..370)
                     /locus_tag="SB502_001812"
     CDS             complement(188..370)
                     /locus_tag="SB502_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HEG0435204.1"
                     /translation="MVSDVSMGNVNLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQASSSSGLDIYA"
BASE COUNT          200 a           81 c           62 g          169 t
ORIGIN      
        1 ccagggaaag tttcacttaa aaccatcttc tttatcattt gcatccttgc tcctaagtaa
       61 atatttgtaa aaaatttaat acgataaata aaatggtaaa attataacga aaaaatacta
      121 aagaaataat tatttaaaaa aacaagccca agataccaaa aagttcttaa gcttgttctt
      181 aagatattta agcgtaaata tctaaaccac tagagctaga agcttgtgga gcggaggctt
      241 gagagacacc ttccatacct tcgatgagtt cattcatcaa tgcctcgttt gtgtccatag
      301 attttttcaa aactgaagta ttaacagcag tcattaaatt aacattaccc atagaaacat
      361 ctgaaaccat acatcctcct tttagattga gtcttaagac tttatttaaa tcggatgata
      421 tttttaaaac ttaatatttt ttactaaact ttttaaaatt tttcaaggaa gccaatatct
      481 gaaattaaaa atcataaatt tttaagataa aa
//
LOCUS       DARATF010000185          512 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.186, whole genome shotgun sequence.
ACCESSION   DARATF010000185 DARATF010000000
VERSION     DARATF010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.186"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(89..>512)
                     /locus_tag="SB502_001813"
     CDS             complement(89..>512)
                     /locus_tag="SB502_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEG0435205.1"
                     /translation="KLKIHFLIANPYLKHLAFRAFDEVAMIKKELRSLGAKTVVLNSG
                     VPTTLSALKQNISYEKYEATKVNGKKLYHKDFLNYAIKLFHMEEKKAIKEVGAMRKNY
                     LSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
BASE COUNT          175 a           92 c           53 g          192 t
ORIGIN      
        1 ttaaaactta cgaaagtttt ttatctcaag ctaaaatttt attttttaat tttgatgaaa
       61 aatttcattt tttcgaattt caaaaaaact aaaattttat atttttcata ctcgctaaac
      121 aaaccccctc ccttaaaccc tcatcaatga ctagaagttt atgtttatca aacaaagcat
      181 aaaacagcaa acaacctgca ctcaaataat tttttctcat cgcgcctact tcttttatag
      241 cctttttttc ttccatatga aaaagtttaa tagcataatt taaaaaatcc ttatggtaaa
      301 gttttttacc atttacttta gttgcttcat acttttcata gcttatattt tgttttaatg
      361 cgctaagtgt ggtaggaact ccggaattta aaaccaccgt tttagcccct aaagaacgaa
      421 gttccttttt aatcatagcc acctcatcaa aagccctaaa agctagatgc tttaaatagg
      481 gatttgcaat taaaaaatga attttaagtt tt
//
LOCUS       DARATF010000186          498 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.187, whole genome shotgun sequence.
ACCESSION   DARATF010000186 DARATF010000000
VERSION     DARATF010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.187"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>498
                     /locus_tag="SB502_001814"
     CDS             <1..>498
                     /locus_tag="SB502_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEG0435206.1"
                     /translation="QKLFLTFFYSGSVKKASGTFGTIAALIPAFFILKYLGINTLFLL
                     SILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGIFLACAIAASVENSIVNFILAFVL
                     FRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDIN
                     LKDLF"
BASE COUNT          148 a           56 c           89 g          205 t
ORIGIN      
        1 tgcaaaaatt atttttaact tttttttatt caggttctgt aaaaaaggca agtgggactt
       61 ttggtactat cgctgcttta atacctgctt tttttatact taaatatctc gggattaata
      121 ctttgttttt actaagcatt ttaatttttg ttgcaagtat tcgtgttata gatgattatg
      181 aaaaaaaaac aggaattcac gatgacaaac acatagttat cgatgaggtt gctggaattt
      241 ttcttgcttg tgctattgca gcaagtgttg aaaactcgat agtcaatttt attttggctt
      301 ttgttttatt cagactcttt gacattacaa aaccttctat tattggtaag atagataaaa
      361 aagtcaaagg cggactaggt gtaatgcttg atgatatgtt agcaggattg tttgctggac
      421 ttttaagtgc ggtaatttat ggatttttac ttaaatttaa tttagttttt tgggatataa
      481 atttaaaaga cttatttt
//
LOCUS       DARATF010000187          463 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.188, whole genome shotgun sequence.
ACCESSION   DARATF010000187 DARATF010000000
VERSION     DARATF010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 463)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 463)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.188"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..214)
                     /locus_tag="SB502_001815"
     CDS             complement(<1..214)
                     /locus_tag="SB502_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEG0435207.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLAPVRGQITDRNGTLLAINDLGFSIS"
     gene            complement(215..>463)
                     /locus_tag="SB502_001816"
     CDS             complement(215..>463)
                     /locus_tag="SB502_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435208.1"
                     /translation="IFSSWLAFFIFYYLCADWIKTNLKIGKFIPVVFVLCAYGIILFL
                     DMILSYIGDEKIKILGWAYIVSVFIECCLTYVFFKGKI"
BASE COUNT          209 a           82 c           36 g          136 t
ORIGIN      
        1 tagaaatact aaaacccaaa tcattaatag ccaataaagt tccatttcta tctgtaattt
       61 gacccctaac aggtgctaaa aattcagttt ttatggcatt ttgtttggca agttcttcat
      121 aatatacatt tgattttata ctcaaataat acacacgact taataaaaat ataaaaaaca
      181 atagtataaa tccaacaact aaacgcattc tcatttaaat tttaccttta aaaaacacat
      241 aagttaaaca acattctata aaaactgaaa caatatacgc ccatcctaaa attttaattt
      301 tttcatctcc aatataagac aatatcatat ccaaaaacaa aataatgccg taagcacaaa
      361 gcacaaaaac aacagggata aatttaccaa tttttaaatt tgtcttaatc caatctgcac
      421 aaagataata aaaaataaaa aatgccaacc aagatgaaaa aat
//
LOCUS       DARATF010000188          452 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.189, whole genome shotgun sequence.
ACCESSION   DARATF010000188 DARATF010000000
VERSION     DARATF010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.189"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..139
                     /locus_tag="SB502_001817"
     CDS             <1..139
                     /locus_tag="SB502_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435209.1"
                     /translation="YEKKIKLLNQNIQNMKEDIADLKETTQKNRSLIEKNRSNIENIR
                     K"
     gene            complement(142..>452)
                     /locus_tag="SB502_001818"
     CDS             complement(142..>452)
                     /locus_tag="SB502_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0435210.1"
                     /translation="IFKNLSQEDQEISFVKIEILNYDSNEDSLNFNLDIFPSGMSYKY
                     GILKGSMHIILQGKTSSTMLFPFLKSMIYKNKSENSSEKIFTLMINQKKHYKLIANLS
                     "
BASE COUNT          191 a           59 c           45 g          157 t
ORIGIN      
        1 ctatgaaaaa aagataaaat tactcaacca aaacatacaa aatatgaaag aagatatagc
       61 cgatcttaaa gaaacaactc aaaaaaatcg ctctttaatt gaaaaaaatc gctctaatat
      121 agaaaatata agaaaataaa actaagaaag atttgcgata agcttatagt gttttttctg
      181 atttatcatt aaagtaaaaa ttttttcact tgaattttcg cttttatttt tataaatcat
      241 actttttaaa aacggaaaaa gcatcgtact agaagtttta ccttgtaaaa taatatgcat
      301 agagcctttt aaaattccgt acttatagct cataccgctt ggaaatatat caagattaaa
      361 gtttaaacta tcttcattac tatcataatt taaaatttca attttaacaa agctaatttc
      421 ttgatcttct tgagataaat ttttaaaaat tt
//
LOCUS       DARATF010000189          412 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.191, whole genome shotgun sequence.
ACCESSION   DARATF010000189 DARATF010000000
VERSION     DARATF010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.191"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>412
                     /locus_tag="SB502_001819"
     CDS             <1..>412
                     /locus_tag="SB502_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0435211.1"
                     /translation="GFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHL"
BASE COUNT          165 a           39 c           58 g          150 t
ORIGIN      
        1 atgggtttga agagcttgaa cttgattatt ttgattttga agaatttatt agtgtaagta
       61 agaaaaattt acctataaat aatttagtag gtcttttttt gcaaagtgga cgcagtaaat
      121 ttggagaaaa aaacatactt ctaagacaaa gctttactct tttagaatta gaaattttaa
      181 agtatttagc tttaaatttg ggtcagcaaa tcagtatttc taagatattt atagaactca
      241 aaaaaagatt aaaaacttca aaagatagtg tttatcaagc tatcaaaaaa ttagaaaata
      301 cttatgtgat ttatacctta aaacatgatg aaaaaaaact tcaaaagatt tattttaaag
      361 attttggcct aagaaataat ctttgtattt caaaggattt ttcacattta tt
//
LOCUS       DARATF010000190          363 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.192, whole genome shotgun sequence.
ACCESSION   DARATF010000190 DARATF010000000
VERSION     DARATF010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.192"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(5..80)
                     /locus_tag="SB502_001820"
     tRNA            complement(5..80)
                     /locus_tag="SB502_001820"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(45..47),aa:Arg,seq:tct)
     gene            complement(100..175)
                     /locus_tag="SB502_001821"
     tRNA            complement(100..175)
                     /locus_tag="SB502_001821"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(140..142),aa:Lys,seq:ttt)
     gene            complement(180..256)
                     /locus_tag="SB502_001822"
     tRNA            complement(180..256)
                     /locus_tag="SB502_001822"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(220..222),aa:Asp,seq:gtc)
BASE COUNT          103 a           90 c           89 g           81 t
ORIGIN      
        1 tgattggcga cccctagagg atttgaacct ctgtttccac acagagagag tgttgtcctg
       61 ggccactaga cgaaagggtc ataaccctaa caataaaaat ggtgtcccgt gttggattcg
      121 aaccaacggc cccctcctta aaagggagat gctctaccgg ctgagctaac gagacaatat
      181 ggcgcagcgg acggggctcg aacccgcgac ctccgccgtg acagggcggc attctaacca
      241 gctgaactac cgctgcatcc aaagtaaaga agtagagatt ataaaaccta tttatgattt
      301 tataaaatgg tggtcactat aagactcgaa cttatgacat ccaccttgta agggtggcgc
      361 tct
//
LOCUS       DARATF010000191          354 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.194, whole genome shotgun sequence.
ACCESSION   DARATF010000191 DARATF010000000
VERSION     DARATF010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.194"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            40..>354
                     /locus_tag="SB502_001823"
     CDS             40..>354
                     /locus_tag="SB502_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435212.1"
                     /translation="MGFRINTNVAALNAKANSDLNSRALDQSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQD
                     GQS"
BASE COUNT          121 a           60 c           75 g           98 t
ORIGIN      
        1 gttcatggat ggacttgaat ttatttaaaa ggatttaaaa tgggatttcg tattaacaca
       61 aatgttgcag cattaaatgc taaagcaaat tcggatctaa acagcagagc attagatcaa
      121 tcactttcaa gactcagttc aggtcttaga atcaactccg cagcagatga tgcttcaggg
      181 atggcgatag cagatagttt aagatctcag gcaaatactt tgggtcaggc tatatctaat
      241 ggtaatgatg ctttaggtat cttgcaaact gcagataagg ctatggatga gcaacttaaa
      301 atcttagata ccatcaagac taaagcgact caagctgctc aagatggtca aagc
//
LOCUS       DARATF010000192          338 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.195, whole genome shotgun sequence.
ACCESSION   DARATF010000192 DARATF010000000
VERSION     DARATF010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.195"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..210)
                     /locus_tag="SB502_001824"
     CDS             complement(<1..210)
                     /locus_tag="SB502_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEG0435213.1"
                     /translation="MFVKNVNFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELS
                     FSEFKAKYYEALSKNKICDFAGFFGV"
BASE COUNT          152 a           47 c           32 g          107 t
ORIGIN      
        1 aactccaaaa aatccagcaa agtcgcaaat tttattcttg cttaaagctt cataatattt
       61 tgccttaaac tcgctaaagg ataattcatt agcatctaaa taatcacaat caatccctat
      121 aattacctta gtcaaatcct ctgcaaaata agaattttca aatttttcaa ggatttgtct
      181 ataataaaaa tttacatttt taacaaacat aataaacctt tttttaaaaa aataaattaa
      241 aataatatta aagaaaaaat ttagataaaa agaagtttag aaacgccaag agcgaagagt
      301 gtgtgtaagt tttaaaatca aagaattact aaaaaaat
//
LOCUS       DARATF010000193          338 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.196, whole genome shotgun sequence.
ACCESSION   DARATF010000193 DARATF010000000
VERSION     DARATF010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.196"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>338
                     /locus_tag="SB502_001825"
     CDS             <1..>338
                     /locus_tag="SB502_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0435214.1"
                     /translation="GIRTILFGNSYGGYLANLCAKIAPWSIDFILDNSSFVNLFGNIF
                     RLIGFGKEIDFTRYHGTYDDTLFKNIFLYLSDKTYWNNNKFSKNYFSNARKIIREPLN
                     KEHLIIQSLY"
BASE COUNT          131 a           30 c           47 g          130 t
ORIGIN      
        1 gggtattaga acgattttgt ttggaaattc atatggcgga tatttagcaa atttatgtgc
       61 aaaaatagct ccttggagta ttgattttat attagataat tcttcttttg ttaatttgtt
      121 tggaaatatt tttagactta taggttttgg aaaagaaatc gattttacta gatatcatgg
      181 aacatatgat gatactttat ttaaaaatat atttttatat ttaagtgata aaacttattg
      241 gaataataat aaattttcaa aaaattattt ttcaaatgct agaaaaatca taagagaacc
      301 attaaacaaa gaacatctaa taatacaaag cttatacc
//
LOCUS       DARATF010000194          306 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.198, whole genome shotgun sequence.
ACCESSION   DARATF010000194 DARATF010000000
VERSION     DARATF010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.198"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>306
                     /locus_tag="SB502_001826"
     CDS             <1..>306
                     /locus_tag="SB502_001826"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VgrG protein"
                     /protein_id="HEG0435215.1"
                     /translation="DDIDKPYVSGSLYNGANPSLVNLPFNDHQTSLSSKTIGVNEEGY
                     NELTLSNIKDKEQIYLKAQKDYDELVQHNFTQRILNDKDSIVDGIYNERIKKVHTQTI
                     "
BASE COUNT          125 a           38 c           46 g           97 t
ORIGIN      
        1 gatgatatag ataaacctta tgtaagtgga agtttgtata atggggctaa tccaagttta
       61 gtaaatcttc cttttaatga tcaccaaact tctctttctt ctaaaaccat aggtgttaat
      121 gaagaaggtt ataatgaact taccctctca aatataaaag ataaagaaca aatttattta
      181 aaagcgcaaa aggattatga tgaattagta caacataatt tcactcaaag aattttaaat
      241 gataaagatt ctatagtgga tggaatttat aatgaaagga ttaaaaaggt tcatactcaa
      301 accata
//
LOCUS       DARATF010000195          301 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.199, whole genome shotgun sequence.
ACCESSION   DARATF010000195 DARATF010000000
VERSION     DARATF010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.199"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>301
                     /locus_tag="SB502_001827"
     CDS             <1..>301
                     /locus_tag="SB502_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006752.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435216.1"
                     /translation="NVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYTIKA
                     GNTSQDFAINGVVIGKVDYSDGDENGSLISAINAVKDTTGVQASKDENGKLVLTSA"
BASE COUNT           98 a           41 c           68 g           94 t
ORIGIN      
        1 aaaatgtagt gatttctact tctgtaggaa caggtcttgg agctttggct gaagagatca
       61 acagaaatgc agataaaaca ggaattcgtg caacttttga tgtaaaatct gtaggagcct
      121 atacaataaa agcaggaaat acttctcagg attttgctat caatggggtt gttataggta
      181 aggttgatta ttcagatggt gatgagaatg gttctttaat ttcagctatc aatgctgtaa
      241 aagatacaac tggtgttcaa gcctctaaag atgaaaatgg taaacttgtt cttacttcgg
      301 c
//
LOCUS       DARATF010000196          301 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.200, whole genome shotgun sequence.
ACCESSION   DARATF010000196 DARATF010000000
VERSION     DARATF010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.200"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>301
                     /locus_tag="SB502_001828"
     CDS             <1..>301
                     /locus_tag="SB502_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006751.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435217.1"
                     /translation="SVVISTSVGTGLGALAEEINRNADKTGIRATFDVKSVGAYAIKA
                     GNTSQDFAINGVVIGQINYNDGDNNGQLISAINAVKDTTGIEASKDENGKLVLTS"
BASE COUNT          105 a           44 c           64 g           88 t
ORIGIN      
        1 atagtgtagt gatttctact tcagtaggaa caggtcttgg agctttggct gaagagatca
       61 acagaaatgc agataaaaca ggaattcgtg caacttttga tgtaaaatct gtaggagcct
      121 atgcaataaa agcaggaaat acttctcagg attttgctat caatggggtt gttatcggac
      181 aaataaatta taatgacggt gataacaatg gtcaacttat ctcagctatc aatgctgtaa
      241 aagatacaac tggtattgaa gcctctaaag atgaaaatgg taaacttgtt cttacttcaa
      301 g
//
LOCUS       DARATF010000197          287 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.201, whole genome shotgun sequence.
ACCESSION   DARATF010000197 DARATF010000000
VERSION     DARATF010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.201"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>287
                     /locus_tag="SB502_001829"
     CDS             <1..>287
                     /locus_tag="SB502_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEG0435218.1"
                     /translation="KEDDKNEEIEKQELLDDSKTNTLEMQEELSESQDDNANKTLETQ
                     NLEQETIKEQTQEDTQTDLDLTLEDGESEKEDLSQEHTALDTEPSLDELDD"
BASE COUNT          137 a           37 c           51 g           62 t
ORIGIN      
        1 tcaaagaaga tgataaaaat gaagaaatag aaaagcaaga attattagac gattctaaaa
       61 caaatacatt agaaatgcaa gaagagctta gcgaatctca agatgataat gcaaacaaaa
      121 ctttagaaac tcaaaattta gaacaagaaa caattaaaga acagactcaa gaagacactc
      181 aaactgattt agatttaact ttagaagatg gtgaaagcga aaaagaagac ttaagccaag
      241 aacatacagc tttggatact gagcctagtt tagatgagct agatgat
//
LOCUS       DARATF010000198          283 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.202, whole genome shotgun sequence.
ACCESSION   DARATF010000198 DARATF010000000
VERSION     DARATF010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.202"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
BASE COUNT          126 a           32 c           32 g           93 t
ORIGIN      
        1 aataatatta cacacaaacc ctataaacca acttaatttt ttgtgttttt ctcctgtgct
       61 ataacattta aaaaaataag cttgtaataa acaaggaagt ataataaatg tgattgtaaa
      121 aaaaataaaa tttataaaga ttaaaaattt agaacactta tatactatat attcttgtgg
      181 tgatactgga ggaccgagca ttacatatcc tctataagtt tcaagatcat agctaagata
      241 aaatatgata ataatagctg taaaaaagat aataaaatat att
//
LOCUS       DARATF010000199          281 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.203, whole genome shotgun sequence.
ACCESSION   DARATF010000199 DARATF010000000
VERSION     DARATF010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.203"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            <1..>281
                     /locus_tag="SB502_001830"
     CDS             <1..>281
                     /locus_tag="SB502_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HEG0435219.1"
                     /translation="KLKNTTISEDLERWIETYLKHIQALSYSNNTFLLYRRILLEFVE
                     YSLDYQDEMQINDIKTTFLVNFLNYLENNSKNGNKLSKKTKITYLRVLT"
BASE COUNT          122 a           31 c           31 g           97 t
ORIGIN      
        1 tgaaacttaa aaatactaca ataagcgaag atttagagcg ttggatagaa acttatttga
       61 aacatattca agcattatcc tattcaaata atactttttt actttatagg cgtattttac
      121 tagaatttgt agaatattct ttagattatc aagatgaaat gcaaataaac gatataaaaa
      181 cgactttttt agtcaatttt cttaattatt tagaaaataa ttcaaaaaat ggcaataaac
      241 tatcaaaaaa aacaaaaata acttatttga gagtattaac t
//
LOCUS       DARATF010000200          245 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.denovo.205, whole genome shotgun sequence.
ACCESSION   DARATF010000200 DARATF010000000
VERSION     DARATF010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.denovo.205"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            complement(<1..>245)
                     /locus_tag="SB502_001831"
     CDS             complement(<1..>245)
                     /locus_tag="SB502_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0435220.1"
                     /translation="ADINRLMEELDNIANTTSFNGKQLLSGGFTNQEFQIGSSSNQTI
                     KASIGATQSSKIGVTRFETGSQSFSSGTVGLTIKNYN"
BASE COUNT           69 a           39 c           45 g           92 t
ORIGIN      
        1 gttgtagttt ttaatagtaa gtcctacagt gcctgaagaa aaactttgtg aacctgtttc
       61 aaatcttgtt acaccgattt tagaagactg agttgctcct atacttgctt taatagtttg
      121 atttgaactt gaaccgattt ggaattcttg attggtaaaa ccaccactta aaagttgttt
      181 gccattaaat gaagtggtat ttgcgatatt atcaagttct tccatcaaac ggttgatgtc
      241 tgctt
//
LOCUS       DARATF010000201         1821 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 113
            SAMN14118037-rid18153003.guided.156, whole genome shotgun sequence.
ACCESSION   DARATF010000201 DARATF010000000
VERSION     DARATF010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118037
            Sequence Read Archive: SRR11101952
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001751010.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001751010.1
            Genome Coverage       :: 125x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:42:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 54 of 67
            Pseudo Genes (incomplete)         :: 13 of 67
            Pseudo Genes (internal stop)      :: 14 of 67
            Pseudo Genes (multiple problems)  :: 14 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118037-rid18153003.guided.156"
                     /isolate="113"
                     /isolation_source="Chicken environment"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 257"
     gene            49..810
                     /locus_tag="SB502_001832"
     CDS             49..810
                     /locus_tag="SB502_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-461"
                     /protein_id="HEG0435221.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFLRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKS"
     gene            complement(908..1792)
                     /locus_tag="SB502_001833"
     CDS             complement(908..1792)
                     /locus_tag="SB502_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEG0435222.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
BASE COUNT          642 a          242 c          264 g          673 t
ORIGIN      
        1 gctttaaaaa gtattttgtt taaaattatt taaatagaaa gatattttat gaaaaaaata
       61 actttatttt tacttttctt aaatttagtg tttgggcaag ataagatatt aaataattgg
      121 tttaaagagt ataatacaag cggcactttt gttttttatg atggaaaaac ttgggcgagt
      181 aacgactttt taagggctat ggagactttc tctcccgctt ccacttttaa aatttttaat
      241 gctctaattg cacttgatag tggtgtgata aaaactaaaa aagaaatttt ttatcactat
      301 agaggtgaaa aagtattttt atcttcttgg gcgcaagata tgaatttaag ttcagctata
      361 aaatattcta atgttcttgc ttttaaagaa gtggcaagaa gaattggtat caaaactatg
      421 caagaatatt taaacaagct tcattatggt aatgctaaaa tttccaagat cgatactttt
      481 tggcttgaca actcactaaa aataagcgct aaagaacaag caattttgct ttttagactt
      541 tcacaaaata gcttaccttt ttctcaagaa gcaatgaata gtgttaagga aatgatttat
      601 ttaaaaaata tggaaaattt agagcttttt ggaaaaacag gttttaatga tgagcaaaaa
      661 attgcttgga ttgtaggttt tgtgtattta aaagatgaaa ataaatataa ggctttcgcg
      721 ctaaatttag atattgataa atttgaagat ttatataaaa gagaaaaaat tttagaaaaa
      781 tatttagatg aacttgtaaa aaaaagttaa aaatgatggc tagtgagtat ttcgtaaaat
      841 gcaaaaatac ttaattgtat gatttgcgta cacttaaagt actcattaaa aaattaaatt
      901 tttgctctta tttatcaagt tttcctacga tgatagggtt aaaggctttt atggatagca
      961 aaagcgtatc gccgattttt acatcttgat aagcttttag aaattcctct tcactaagag
     1021 tgattttaat aatatcttga tttaaaagca aggttaaaac cactaaaata tcactttttt
     1081 taatttctag caaagttgca cttaagcgta attttgcgct gatatttgaa tgagtaaaaa
     1141 attcattttt aggaaaatct ttaataattt ttccgttttt aagctctaaa attctatgac
     1201 ttaacttata aatttcagct agatcatgac ttaccaataa agtacttatt ttaaaatact
     1261 ctaaaatctt ggttaattca tcttgtaaat tggcacgcat tttaaaatcc aaagcactca
     1321 aaggttcatc taaaagcaag atttttggtt ctcttgctaa agctcttgct aaagctactc
     1381 tttgtgcctg ccccccactt aaatgtttag gataaatttt agctaaattt tcaagcttca
     1441 ttaaggctaa aagctcgcta acctttgctt tagaactagc ggcataggcg atgttttctt
     1501 ttatattcat atttggaaaa agcgcataat cttgaaaaac aaaaccaatt tttctttttt
     1561 gtaaagctaa actaaaattt tttgaagaat caaaccaaag ttcattatct acttctatac
     1621 gccccaattt aggctttata agtcccgcta tgatttttaa aagagtggtt tttcctgctc
     1681 cactttcgcc aaaaagtgca gtaatttttc ctgattctat atctttttta aaatttaaat
     1741 ccagtcttcc tttagcggta ttcataggat gattgatatc aattcttatc attgaaaact
     1801 cattttttta ttgataaaat a
//
