LOCUS       DARBAC010000001        42054 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.001, whole genome shotgun sequence.
ACCESSION   DARBAC010000001 DARBAC010000000
VERSION     DARBAC010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 42054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42054
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.001"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            128..1504
                     /locus_tag="SB799_000001"
     CDS             128..1504
                     /locus_tag="SB799_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEG0867285.1"
                     /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIIAGIVLGYIDKEL
                     AIASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLA
                     LAIGIFMANVMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDII
                     TPFTEGKTIQVLVIAIITALIISLMRIEDKQAIQRVFEVAQNFVFKILQIIMYFSPIA
                     AFSAMAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFIS
                     REVLIVFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIF
                     LAQAFNVNLSLAHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATL
                     AQVLPVTAIGILLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDWEKFRYAMDNPE
                     KFHNAGMN"
     gene            complement(1501..2307)
                     /locus_tag="SB799_000002"
     CDS             complement(1501..2307)
                     /locus_tag="SB799_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HEG0867286.1"
                     /translation="MRGIFYIIALFSLLNADELTEALAKNNNQNSWEHFDYENTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENAQVKNLSSLYEGENNSLL
                     FQKELFVAQDNYNYSWGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            2449..3975
                     /locus_tag="SB799_000003"
     CDS             2449..3975
                     /locus_tag="SB799_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEG0867287.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVAKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMVKWSEILRIAISWIASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVVTFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRSTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            complement(3972..5150)
                     /locus_tag="SB799_000004"
     CDS             complement(3972..5150)
                     /locus_tag="SB799_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEG0867288.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCRFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILET
                     "
     gene            complement(5160..6056)
                     /locus_tag="SB799_000005"
     CDS             complement(5160..6056)
                     /locus_tag="SB799_000005"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEG0867289.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILVELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQSLLKQND"
     gene            complement(6053..7471)
                     /gene="gatB"
                     /locus_tag="SB799_000006"
     CDS             complement(6053..7471)
                     /gene="gatB"
                     /locus_tag="SB799_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEG0867290.1"
                     /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHENNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKARFIDELGIKESDAEVLISSLEMSRFFESLISQNL
                     NSKLCVNWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            7586..8080
                     /gene="luxS"
                     /locus_tag="SB799_000007"
     CDS             7586..8080
                     /gene="luxS"
                     /locus_tag="SB799_000007"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEG0867291.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSVAK
                     AWEEAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIMNNKELK
                     LENA"
     gene            8392..9383
                     /locus_tag="SB799_000008"
                     /pseudo
     CDS             8392..9383
                     /locus_tag="SB799_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
     gene            9394..10164
                     /locus_tag="SB799_000009"
     CDS             9394..10164
                     /locus_tag="SB799_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0867292.1"
                     /translation="MTLFTKAFCVATLFTSFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKKFNPEEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSDEVKKFIEEKYQGALIPTF"
     gene            10176..12440
                     /gene="metE"
                     /locus_tag="SB799_000010"
     CDS             10176..12440
                     /gene="metE"
                     /locus_tag="SB799_000010"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEG0867293.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALIQ
                     KYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYTQNIVLNTSCSLLHVPYSTE
                     FESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIRF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVIASL
                     KNLVTATQKIREQL"
     gene            12450..13298
                     /gene="metF"
                     /locus_tag="SB799_000011"
     CDS             12450..13298
                     /gene="metF"
                     /locus_tag="SB799_000011"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HEG0867294.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAGGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLEKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALAGIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNALALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHA"
     gene            complement(13320..13511)
                     /locus_tag="SB799_000012"
     CDS             complement(13320..13511)
                     /locus_tag="SB799_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867295.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(13508..14188)
                     /locus_tag="SB799_000013"
     CDS             complement(13508..14188)
                     /locus_tag="SB799_000013"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEG0867296.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLVFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(14257..15597)
                     /gene="radA"
                     /locus_tag="SB799_000014"
     CDS             complement(14257..15597)
                     /gene="radA"
                     /locus_tag="SB799_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEG0867297.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIIDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            complement(15597..16463)
                     /gene="ftsY"
                     /locus_tag="SB799_000015"
     CDS             complement(15597..16463)
                     /gene="ftsY"
                     /locus_tag="SB799_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEG0867298.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            complement(16463..17020)
                     /locus_tag="SB799_000016"
     CDS             complement(16463..17020)
                     /locus_tag="SB799_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0867299.1"
                     /translation="MKIKKILLLVAISCLFVACGNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKATLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            17103..17729
                     /locus_tag="SB799_000017"
     CDS             17103..17729
                     /locus_tag="SB799_000017"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEG0867300.1"
                     /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFVQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            17650..19203
                     /gene="rny"
                     /locus_tag="SB799_000018"
     CDS             17650..19203
                     /gene="rny"
                     /locus_tag="SB799_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEG0867301.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKIQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQDLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            19212..19769
                     /locus_tag="SB799_000019"
     CDS             19212..19769
                     /locus_tag="SB799_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0867302.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKLALAMMKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGMAKYNFIKFFIINTLASLAWAIVLGFAAYTFGYVIEAIFDKLSLY
                     PYAAPLFLLFLAGIIWLYLSKFSKK"
     gene            19769..21028
                     /locus_tag="SB799_000020"
     CDS             19769..21028
                     /locus_tag="SB799_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEG0867303.1"
                     /translation="MSLWNSFFYSFKEFHYLFLSVVIIFIFNILLEYNNFLKFKNQKH
                     YFINNALLTHQYTKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQLLSLRIITHN
                     INFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLE
                     LRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKIYFPYRNLRLDLSILIF
                     TLLLAYACLIGFIPSFVRSLIMAFWVFYLLCKNIKIINFFTLFCSILLCISLYPRLLF
                     SIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLPVLYFFPLISYQQI
                     LGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIYIPFWIFISYLIA
                     SLISVRFKYLAFLCIFANFIPFIMIVI"
     gene            complement(20972..21778)
                     /locus_tag="SB799_000021"
     CDS             complement(20972..21778)
                     /locus_tag="SB799_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEG0867304.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNYNHNEGNKIRKNTKKS"
     gene            complement(21782..23164)
                     /locus_tag="SB799_000022"
     CDS             complement(21782..23164)
                     /locus_tag="SB799_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEG0867305.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIAQILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLSSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVNPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVREAIDEDLRNLEHYFLEAGASEFKIAKDEQETADIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPALLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            complement(23167..23892)
                     /locus_tag="SB799_000023"
     CDS             complement(23167..23892)
                     /locus_tag="SB799_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HEG0867306.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            24014..25174
                     /locus_tag="SB799_000024"
     CDS             24014..25174
                     /locus_tag="SB799_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEG0867307.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            complement(25171..25374)
                     /locus_tag="SB799_000025"
     CDS             complement(25171..25374)
                     /locus_tag="SB799_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867308.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLNSLINAKDKALLSN"
     gene            complement(25376..26056)
                     /locus_tag="SB799_000026"
     CDS             complement(25376..26056)
                     /locus_tag="SB799_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HEG0867309.1"
                     /translation="MGRSRKNFLSLLENDKVVIFCAFDKDYNVFRAKVYSENLFYHLG
                     FKDIKKCVFMDQIHSHKVIIYEKNLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKNYEIDGEILE
                     FAKKEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTPKRF
                     VSVVYLKD"
     gene            complement(26020..26631)
                     /locus_tag="SB799_000027"
     CDS             complement(26020..26631)
                     /locus_tag="SB799_000027"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEG0867310.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGACLSVT
                     KLYEGGFEVELSRESRTHIAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFYISLPKEAMKFMAEKGSIAVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            complement(26640..29180)
                     /locus_tag="SB799_000028"
     CDS             complement(26640..29180)
                     /locus_tag="SB799_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867311.1"
                     /translation="MKKIFYGVIAFVVVLLIAIYTILFTSFGNNIVANIAQKKIKESA
                     GLDVNITHFNLRFSSLELQANIANMADFNLKGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNQNLSFVGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTNYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDISKNALSTDFNLSIPSLVKLET
                     LTKTRLNGNLGVIGQTSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKLNTNELKKIAKIELPNTIFS
                     FDAKANAKNSNIAYNALLASNLLNIKKLQGSYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLAAKAHIIGTQIQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     AGMPNYASGIVNAKINLDNIDFNNLNGKANLEAKGILNATTLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKSLNFVVNSPNLFEGRLQSTLKDNLLLADLNGVDLSSLAQGLD
                     FMDVYQGKADVKANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKLDLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
     gene            29342..29602
                     /gene="groES"
                     /locus_tag="SB799_000029"
     CDS             29342..29602
                     /gene="groES"
                     /locus_tag="SB799_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEG0867312.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            29623..31260
                     /gene="groL"
                     /locus_tag="SB799_000030"
     CDS             29623..31260
                     /gene="groL"
                     /locus_tag="SB799_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEG0867313.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAEATSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPAMPDMSGMGGMGGMGGMM"
     gene            complement(31303..32493)
                     /gene="dccS"
                     /locus_tag="SB799_000031"
     CDS             complement(31303..32493)
                     /gene="dccS"
                     /locus_tag="SB799_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HEG0867314.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDAKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLAPMSADHYFLRHASNEEVNTNDGLQILIQGEDVSKDLFWIRTKVF
                     GFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGDNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(32486..33151)
                     /gene="dccR"
                     /locus_tag="SB799_000032"
     CDS             complement(32486..33151)
                     /gene="dccR"
                     /locus_tag="SB799_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HEG0867315.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            33299..33898
                     /locus_tag="SB799_000033"
     CDS             33299..33898
                     /locus_tag="SB799_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEG0867316.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFELAAKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEHPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGHKFTCKTCKQAIKFYKKHS"
     gene            33909..34280
                     /locus_tag="SB799_000034"
     CDS             33909..34280
                     /locus_tag="SB799_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEG0867317.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSAIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLQEDSNDNELGDFDFAIEALEELKD
                     GDYQKASKKIDKIVKNLKQTK"
     gene            complement(34370..34444)
                     /locus_tag="SB799_000035"
     tRNA            complement(34370..34444)
                     /locus_tag="SB799_000035"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34410..34412),aa:Asn,seq:gtt)
     gene            complement(34537..35784)
                     /locus_tag="SB799_000036"
     CDS             complement(34537..35784)
                     /locus_tag="SB799_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0867318.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLNDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            complement(35781..36455)
                     /locus_tag="SB799_000037"
     CDS             complement(35781..36455)
                     /locus_tag="SB799_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0867319.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(36531..37949)
                     /gene="htrA"
                     /locus_tag="SB799_000038"
     CDS             complement(36531..37949)
                     /gene="htrA"
                     /locus_tag="SB799_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HEG0867320.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTTTANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDTEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTISALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKIIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGAQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            38149..39042
                     /locus_tag="SB799_000039"
     CDS             38149..39042
                     /locus_tag="SB799_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HEG0867321.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNAGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEENLDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEATINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            39058..39432
                     /gene="hspR"
                     /locus_tag="SB799_000040"
     CDS             39058..39432
                     /gene="hspR"
                     /locus_tag="SB799_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HEG0867322.1"
                     /translation="MEHHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDHIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNSFDLIFYEKK"
     gene            39439..41064
                     /locus_tag="SB799_000041"
     CDS             39439..41064
                     /locus_tag="SB799_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEG0867323.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTTLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            41074..41406
                     /locus_tag="SB799_000042"
     CDS             41074..41406
                     /locus_tag="SB799_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867324.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            41403..42023
                     /locus_tag="SB799_000043"
     CDS             41403..42023
                     /locus_tag="SB799_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0867325.1"
                     /translation="MINVFFDMDGTLIDSANAISCTVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHQIIPYFDKILGVNLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKDLKENEFSNASELKGFLEKYL"
BASE COUNT        15006 a         6836 c         5957 g        14255 t
ORIGIN      
        1 gtaacattta tataaaaaat tatcatatca tataaaagaa agtatttcta gatttgtttt
       61 tttgttaaaa tttacaatac gcattgttaa aattatattt tacaaagatc aaaaggagtg
      121 aataaacttg gaaactttaa gtcaaacttt agctgaaaga aaaccgcctt tatataaacg
      181 tattatcaaa agtcttggat tttgggtgat tataggcatt attgcaggta ttgtacttgg
      241 ctatatagat aaagaattag ccattgctag caaaccagga gttgattatt ttataggtgc
      301 tttaaaggtt cttataggtc ctattatttt tgttactttg gttttaggca tcattagtct
      361 tgaaagttta aaaaaagtag gtagcattgg tgctaaagcg gttatttact ttgaagttgt
      421 aagtacttta gcacttgcta taggtatttt tatggcaaat gttatgcaac caggccatgg
      481 aatgaatctt gatccaagtc aacttgatac aaaaagcgtt caaaaataca tttctcaaac
      541 cacagaagta agtgcgagct ctgagattat gcatatttta aaagatgcta tgcctactga
      601 tattatcacg ccttttacag aaggaaaaac catacaagtt ttagttattg ctataattac
      661 tgctttgatt atttctttaa tgagaataga agataaacag gcaattcaaa gagtttttga
      721 agtggcacaa aattttgttt ttaaaattct acaaatcatt atgtatttta gtcctattgc
      781 cgccttttca gcaatggctg tactcatagc tcaatacgga attggctctt tgatcaactt
      841 agcatattta cttttagtaa tgctgatttc atgtcttgtt tttatatttg gaatcttagg
      901 tctgatttgt tattttgcaa aagtaaatat cttcaaattt atgagattta tctcaagaga
      961 agtattgatc gtttttgcaa ccagttcaag cgagtctgca cttgctcctt taatgagaaa
     1021 actagaaaaa gcaggacttt ctaaagcaac agtcggactt gttttaccaa cgggatatag
     1081 ttttaatctt gattgtacaa atatttatct agctatgagc ttaatctttc tagcacaagc
     1141 tttcaatgta aatttaagtt tagcacacga aatcagtatt ttaatagtat taatgatagc
     1201 ctcaaaaggt gcagtaggtg taactggatc aggttttata gtgcttggaa gtacgcttgc
     1261 ggctctagga aatatggaaa tttcagaagc aaatgcaacc ttagcacaag ttctaccagt
     1321 aactgctata ggtattcttt taggtgttga caaatttatg tctgaaatga gagcggttgg
     1381 aaatctttgt ggaaattcag tagcagcctt aatcgttgcc atctgggata aacaaattga
     1441 ttgggaaaaa ttccgctatg ctatggataa tccagaaaaa ttccataatg ctggaatgaa
     1501 ctaatgggtt ctttggagga aatcatatcg attaacctcc tctaaagtat tatctttttt
     1561 tctaaattgc tttaaaaaac tttcattgaa attaaaacta aatccaactt gaacaacagt
     1621 atcatcaaca gtctctcttg cactataatc acgacgcaat aaatttaaac taaatacact
     1681 ataaggagag taagatactt gataattagt tttatcatta tccttactta tatcaaaagc
     1741 aaaagcggta taagttggaa ttacaaaact cattccaagc tgtaaatttt tttctgcttc
     1801 attgggtata taataattac tataagcctt tataaattta ctataaccaa actctgtacc
     1861 aaagctttta gtatcttttt gttctttttg tttatcaata aaaccattaa ctccaaataa
     1921 aaaatcatct ttttcataac gattgattaa accccatgag taattataat tatcttgagc
     1981 cacaaaaagt tctttttgaa aaagcaaaga attattctcc ccctcataaa gagaacttaa
     2041 atttttaacc tgcgcgtttt cgttttgaaa atccaaattc ccatctgttt tatctatacc
     2101 attattattt tctaaagttt ttgaaagtaa gctatcaaaa gtgcttttaa aatccacatt
     2161 ctcttcttga atttttggag cttctttggt attttcataa tcaaagtgct cccaagaatt
     2221 ttgattatta ttttttgcta aagcctctgt aagttcatcg gcattgagta aagaaaacaa
     2281 tgctattata taaaaaatac ccctcattat tcttatattc cttattattt cttgtttgag
     2341 tatttattat aaaaaaataa tataaataaa aattccacaa agactaaaaa ataaaattag
     2401 caaatttaaa gtaaataagt gtataattaa aataaaaaag ggttattaat gcaaaaagac
     2461 aacctcatag cttttgttat ttttattatc agtactatcg catttgttat ttggggattt
     2521 ggttatattt cgcaacatca attgattctt tttattcttg cttctatatt tggcattttt
     2581 atggcattta atataggtgg aaatgatgta gccaattctt ttggaacaag cgttggcgca
     2641 aaaacagtaa ccattaaaca agctttaatt atagcagctg tttttgagct aagcggggca
     2701 atcttcgcag gcgcagaagt tgctaaaacc atacgcagcg gtattgttat ttttccaaat
     2761 tctttagatc ctatgctttt tgttatcatt atgcttgctg cacttttaag ctctggggtt
     2821 tggattttta ttgcaaccaa gaaaggctta cctgtatcaa ccacacacag tatagttggt
     2881 ggaattgtag gtgctagcat tatgatgggg cttttaaaat ttgatgggat ccaaacactc
     2941 tctatggtta aatggagtga aattttaaga atagctattt cttggatagc ttctcctctt
     3001 ttagggggta ttgtagctta tattatttat tcatatattg ataagaaaat tttaaaacca
     3061 tcagaaaaac taaatgatga tttgaaaaat atcaaaaaag aaagaaaaaa attcaaagaa
     3121 gaatactttt taaatttaaa aacaaaatcc caagaagaac aaatcaaaga actttccgct
     3181 atagctttag atgaggaaga acaagaaaat aatttctata gaaataaaat gaaggaattt
     3241 aaggatcaag aaaaagatat agatatttac tctattttaa aaactcatat gccaatcatt
     3301 gcttgtattg ctgctgctat catttcggca atgtttttat ttaaaggttt aaataatgtt
     3361 agcactttag atattttaca aaacttttgg attatcggaa ttataggaac tataagttat
     3421 gttgtaacat ttgctatagt caaaatcgtt aaaaaaacag aacttaataa aactactgat
     3481 agaattttct catggtttca aatatttaca gcctctagtt ttgcattttc acacggagcc
     3541 aatgatatag ccaatgctat aggtcctttt gcagcgattt tagatgtctt aaaaaacggc
     3601 acaattaacg cgacttctcc tgtacctttt gctgctttag ctatgtttgg agttgctcta
     3661 gttgtagggc tttggttttt aggtaaagaa gtgattacta cagtgggttc aaaacttgca
     3721 accatacgct ctactactgg attttctgca gaacttggtg caagcatagt tatactctta
     3781 gctacacaat ttggaattcc tgttagctcc acccatatac tcataggtgc tatattgggt
     3841 ataggagtgt ataataaaaa cgcaaattgg attatgatga agcctatagg attggcttgg
     3901 attatcactt taccagccgc tggtattatg gcagcacttg tatttttagg atttaaacta
     3961 tctttgggaa tttaagtttc taaaatattt tttcctttaa ttatatgcat tttaatcttt
     4021 ccaaaaagtt tatcctcaga ataaagagaa ctttttggag caaaaatttc ttcattctca
     4081 tcaaaaagaa ctagattagc ttctttgcca acttctataa ctccactatt taaacctaaa
     4141 aattcactag gatttttact tgtaaatcga caaagctctt gccaatttaa aaatccttct
     4201 ttgattaaaa aagtataaca aagacttata aattcgcata cgctatgaat tccaaaagcc
     4261 gcttcatcaa aagctaaatc ttttaaagaa attgattttg cactatgcag ggaagttaaa
     4321 aagctaatct ttccttcttt taaagcctct cttaaagcca aaacatcttc tttgcttctt
     4381 aaaggtggca taagtttcgc agccgtatta aaatcttcac aagcactatc atctttgata
     4441 agatgatgaa tgcttacaag ttttaaatcc ttttcatcta ataatactaa agaatctttc
     4501 aaacttaaaa gatcaaaaat aactttattt ttataaaatt tagccaattc tttcatttta
     4561 gctatctggc tagtttcagc gattttactc atgcctataa gccctagctc aaaactcatt
     4621 tcacaatcat tcatcactcc attatcatca aaatccttat cataacaacg cacaaaaatt
     4681 ggagagtctt tcataaaagc atattgtgaa cttactttta aagtatttgc atctaaagag
     4741 ctgtcaagtt ctagagcaca agcaccttta tttaaaagag tggctaaatt tttaagcttg
     4801 ccgtttgcat ccttaacccg cacacttgaa aaaatttgca tctttctttg agctaaattt
     4861 tgtaaaaata aagcaaaact ttcttcatca aaatccatgc aatcacgcaa aactatacta
     4921 gaaattcctc cttttagaca ctcattttct aaaagctcta aattagctaa agaaaattta
     4981 tcgtttttta aactcacaca caaatccaca aaagatggaa gtaaagtcat acctttagca
     5041 tctaaaattt cttcgccttg taaattagaa ccaatattgg taatttttcc ttctttaatc
     5101 tctatatctt gtaaagaatc tccataaatt tttgcatttt taattatcat gatttttcct
     5161 taatcatttt gctttaataa actctgcgtt gcttcttgca cgcttttacc cttaaaaatt
     5221 gccactactt catttacaat aggtgtataa attcctttca tttttgctag tttttctata
     5281 gcataagcag tttttacacc ttctgctact tcattaagtt cgactaaaat actatctaat
     5341 ttttgatttt gcgccagttt taaacctact ctataatttc ttgataaaac actcgttgca
     5401 gttaaaaaca aatcccctgc cccacttaac cctaaaaaag tttcttcttt agcaccaaaa
     5461 aatttaccaa aacgatgcat ttctataagc cctcttgaaa tcagtgccgc tcttgcatta
     5521 ttgccaagtt ttaacccatc actaatccca cttgcaattg ctaaaacatt cttataagca
     5581 ccacaaattt cagcaccacg aacatcatta tcaatataag ttttaataaa atcagggaaa
     5641 aaacttgcaa attttttaca aagctcttga tttatcccgc taatcatcaa agcagtagga
     5701 agtttttgca ttacttcagc agcaaaagaa ggaccgctta aaacacaaaa attttctttt
     5761 ggtacaaaat ctaaaaaaat ttcatctaaa aattgacaac tttgatcttc tatgcctttt
     5821 gaagcaatta aaattttttg tcccttgttg atgaaatttt ctttaagcca agcacgcatc
     5881 ccttgagaac ttaaagcaaa aacaagatat tcacattcta aagcttcttt tatgctaaca
     5941 aaatcttcta aatcacgctg atgcaaagaa ctaataaaac aattgtgatt ttcttttaag
     6001 gctagatgta aagcactgcc ccattttccc gcaccaataa ccgctatacg catcaaccaa
     6061 gctttgtttt taaaatttca tttacttttg caggattaaa agctcctttg ccttctttca
     6121 ttgtttgacc cacaaaaaat ccaaaaagct tgtctttacc acttttatac tctgcaacct
     6181 tatcggcatt tgcatttaaa atttgttcaa tcaccgcttc tatggctgaa tcatcactta
     6241 cttgcttaag tcctagcttt tctatagctt catcaatttc cacgctagta ttttcaaata
     6301 caaaagctaa gacatcttta gccgcttttg cactgatggt gccatcttct atgcgtttaa
     6361 ttaaaactcc aagcttttga gcatctacgg gagaattttc tatagtcaat tctcctttta
     6421 aaagtcccat aagttcagta tttaaccaat ttacgcaaag cttagaattt aaattttgag
     6481 aaataagact ttcaaaaaaa cgactcattt ctaaagaact gattaaaacc tcggcatcac
     6541 tttcttttat accaagctcg tctataaagc gtgctttctt ctcatcagga agttcaggaa
     6601 ttttaatatc caaaaactca tcttttaaca aaacaggaag caagtcaggg tctggaaaat
     6661 aacgatattc agccgcttct tctttgccac gcatacttct tgtaactaaa tttgttgtat
     6721 caaaaagtct ggtttcttga actacttctt gttcgtaagt tccatcttcc caagcctcac
     6781 tttgtctttt tacctcatat tctatggctt tttggataaa acgaaaagaa ttaagatttt
     6841 taatctctac tctagtataa agttttgtat cgcccttagg ccttatacta acatttgcat
     6901 cgcatctaaa acttccttct tgcatatttg catctgaaat atctaaaaag cgtataatag
     6961 aatgaagttt tttaagataa gccaccgcct catcgctact tctaagctca ggctcactga
     7021 caatctcaag caaaggagtt cctgcacgat ttaaatccac tttagaaaaa ttattttcat
     7081 ggatattttt acctgcatct tcttctaagt gtgctcttgt aatacctatg cgtttatttt
     7141 caccctttac attgataaaa agctcacctt tttctactat agggatatca aattgtgaaa
     7201 tttgataggc tttaggtaaa tctggataaa aataattctt acgattaaaa acactttttt
     7261 tattaattgt tgcattgaca gcttttccaa aagctatagc tttttttaca gcctcttcat
     7321 ttaaaacagg caaagctcct ggtaaggcca aacaagtggg acaaacattg gtatttggag
     7381 cttctccaaa agaagttgca catgagcaaa agatttttgt ttttgtattt aactgagtat
     7441 gaacttcaag acctataact acttcaaaca taaaatttcc ttgaattttt aaatgtttta
     7501 ttttatcttt ttttctttta gaaaggcttt aaatattaac tttaaatgct ataattctta
     7561 gacaatttat atttaaggag ttaaaatgcc attattagac agctttaaag ttgaccatac
     7621 taaaatgcca gctcctgctg tgcgtttagc taaagttatg aaaacaccta agggtgatga
     7681 tattagcgtg tttgatttgc gtttttgtat accaaataaa gacattatga gcgaaaaagg
     7741 tacacatacc ttagaacatt tatttgcagg atttatgaga gatcatctta attcaaattc
     7801 agttgaaatt attgatattt cacctatggg ttgtcgcacg ggtttttata tgagtttaat
     7861 tggaacacca gatgaaaaaa gtgttgcaaa agcttgggaa gaagctatga aagatgtttt
     7921 aagcgtaagc gatcaaagca aaattcctga acttaatatc tatcaatgcg gaacttgcgc
     7981 aatgcattct ttagatgaag ccaaacaaat tgcccaaaag gttttaaatc taggtattag
     8041 cataatgaat aacaaagaat taaaactcga gaatgcttaa aaagaatctt tattttttag
     8101 acgattaagc tttaattaat atatttttat atatgatttt gaaattttat tattttaaaa
     8161 ggagaaaaaa tgaaactgat gtgcgagatg tgtagtatct agtgcgtcct ttggcttaac
     8221 attatgtttc caaaggtcca aaaagtggat aaggagatat aatgtgtaag aaagtcaaaa
     8281 aagtttattt tttcaaaata ctcatttaaa atcttaactt acaaaaattt ctctaaataa
     8341 aatttaattc aaaatatctt cttatcctta attttaattt aaggagcaaa aatgaactta
     8401 cctatacttg atttacaagc ttatgaaaaa gataaaagca cttttcttaa aaatttaaga
     8461 gaaattgctt ctaaaatagg ttttttttat cttatcaata ccagtataga taaaaattta
     8521 aacgagaaat tattcaaact tggcaaagaa ttttttaatc tttctagaag ttcgaaagag
     8581 cttatttcta tggtacattc tcctcaattt agaggttata ctagcgaagg ttttgaatac
     8641 acagcaggat ctaaggatta tagagaacaa ctggatatag gcacagaaag agatgcttta
     8701 aactggaatt taaactcacc cttatggcaa agactagaag gtcctaatct ttggcctagt
     8761 gaaattccag aacttaaaaa aactttctta acttggcaca aacaaaccaa aaaagcttgt
     8821 ttaaagcttt taaaagcctt cgctcaagct cttgatctac ctaacaatgc ttttgataaa
     8881 ctttatggag aaaattctta cgaacattgt aaaatcatac attatccaaa aagctcaaaa
     8941 aatatcactc aaggcgtagg ttcacataaa gatggtgggc ttatcacttt tgtttttcaa
     9001 gaaaaacaaa gcggacttga ggcttttata gatggtaaat ggcttagtat acccccactt
     9061 gaaaatagcg ttgtagttaa tataggagaa tttttagaac tagctaccaa tggctattta
     9121 aaagctacta ttcaccgcgt gaatttaagc ccaaaagaac gctttagcat agcttatttt
     9181 cttggagtgc agcttgataa ggatatacct atttttaagt taaatccaga gcttgctaaa
     9241 gaaagtaaag gtatggatac tgatcctaaa atccactttt aagaaatgtt gcaagtaatt
     9301 attttaaaag aatgatacgc tctcatcctg atgtggcaag tatttatcat agtgacttga
     9361 tagaaaaatt taaatttgcg taaaggagaa aaaatgactt tatttactaa agctttttgc
     9421 gtcgctactc tttttaccag ttttgcatgg gcaaatgaag aacttaaagt tggctcttct
     9481 ataacacctc atgcagatat tttaagattt ataaaatcag cgcttcaaaa acaaggttat
     9541 gatttaaaaa tttatgaatt caatgatggg gtaatcccta atgtaatggt tgaaaatggt
     9601 gagttagatg ctaattattt tcagcatgag ccttatttaa aagaattcaa tcaaagacaa
     9661 ggcactcatc ttgtaaaagt tgctagtatc catatagaac ctatggcagt gtattctaaa
     9721 aaacataaaa aatttaaccc cgaggaagga caaagcattt ctatacccaa taatcctaca
     9781 aatgaaagtc gtgctttacg cattgtagca agcaaaggac ttatagaagt taaggataat
     9841 gagctcatca ctcctttaga tatcactaaa aatcctaaga agcttaaatt tgtagagtta
     9901 aaagacgctc aacttacaag gagtttagat gatgtagatt attctcttat taatagcaat
     9961 tttgctattt tagcaggttt aaaccctgta aaagatgggc tttatacaga aagtaaatat
    10021 agtgaatatg gcaatatcat cgccgttaaa gaaggtaatg aaaaccttcc taaaatcaaa
    10081 gccctagtaa aggccttgca aagcgatgaa gttaaaaaat ttatagaaga aaaatatcag
    10141 ggtgctttaa tccctacatt ttaaggagaa caaatatgaa aaattcaatc atttcttacc
    10201 caagaatagg tgcaaataga gaattaaaat ttgctattga aaaatacttt aaaaaccaaa
    10261 gttctaaaga ggagctttta aagagtgcta aggatttaag gattagacac tggcaagaaa
    10321 ttcaaaaagc tggcattgat tttatcccta gtaatgattt ttcactttat gataatgtct
    10381 tagatgcagc tgtgcttttt aacattgttc atacaaagta taaaaattta aatttagatg
    10441 ctttagatga atactttgct caaagtcgag gttatcaagg agaaaatgga gatgttacag
    10501 ccttagcaat gaaaaaatgg ttcaatacaa attatcatta tttggtgcct gagtgcgata
    10561 atgctgatat tatagcttta acaggggata aaatttttaa agaatatctc gaagctaaag
    10621 agcttggcat agaaagcaag cctgttttaa taggcatttt cacacttttt aaactcattg
    10681 cctttaaaga tgaaaaaact caaaaactcg ccaaagaaaa gcttttaaac gcttacatag
    10741 agctttttga taaactaaat gaacttaaag taacatggct tgaacttgat gagccttatt
    10801 tggtttatga tttaagcaag gaagatatcg ctttgtttga agaattttac caagagcttt
    10861 taaatcacaa aaaagatctt aaaattttac ttcaaagcta ttttggagac ttaagagata
    10921 tttatcctaa acttttagaa agcaaatttg atgctttggg tcttgatttt atcgaaggta
    10981 aacaaagctt agccttgatt caaaaatacg gctttgctaa agataaaatc ctttttgcag
    11041 gtcttattaa cggcaaaaat atctatgcta atgattatgc taaaagccta aagcttatta
    11101 aagaacttca aaaatataca caaaatatcg tcttaaacac ctcttgttcg cttttgcatg
    11161 tgccttatag cactgaattt gaaagcaaat tagattcaag ctatcttaaa ctttttgcct
    11221 ttgctaaaga aaaacttcaa gaacttaaag atttaaaaga aattctaaat tctagcgaag
    11281 aaaatccgct ctttagagcc aatcaagagc tttttaaaaa tatcccagag cgtttagatg
    11341 aaaaagtcaa agcaaggctt aaggctttaa aaaaagaaga ttttaccaga acgcctagtt
    11401 ttaaagaacg tgccttaatc caaaaagaat ttttaaaact ccctctttta ccaaccacaa
    11461 ccataggttc ctttcctcaa agtgccgatg taagatctaa tcgccttgcc tttaagcaag
    11521 aaaaaatttc agctcaaaac tacactgaat ttaaccaaca aaaaatcaaa gaatgcatac
    11581 aaattcaaga agaaatagga cttgatgttt tagtgcatgg agaatttgaa agaaatgata
    11641 tggtggagta ttttggagag aatttaaagg gctttttatt tactcaaaat ggctgggttc
    11701 aaagctatgg cacaaggtgc gttaagcctc ctgtaatttg gggtgatgta tcacgcacaa
    11761 agcctatcac cttagcttgg tctaaatttg cacaaagttt aagtcaaaaa atcgtaaaag
    11821 gtatgctaac tggacctgta accatactta attggtcctt tccaagagaa gacatcagtc
    11881 taaaagaaag cactgagcaa attgccttag ctataagaga tgaagtatta gatcttgaaa
    11941 atgcaggtat aaaaatcata caaattgatg aagcggcttt gcgtgaaaaa ctgcctttaa
    12001 gaaaaagtga ttggcatagt gagtatttag attgggctat tcctgctttt aatcttgtgc
    12061 atagcggggt aaaagctaaa actcaaattc acactcatat gtgttatagt gaatttagtg
    12121 atatcttaaa agaaattgac gctatggatg ctgatgtgat ttcttttgaa gcttcaagat
    12181 caaacttaag tcttttagat accctaaaag ctattcgttt taaaactgag gtgggaccag
    12241 gagtttatga tatacatagc cctagagttc caagcgtaga agaattaagt ttaactatag
    12301 aaaaaatttt aaacaaatta cctaaggagc aaatttggat caatccagac tgcggactta
    12361 aaacaagagc ctatgaagaa gttatagcct ctcttaaaaa tttagttacg gctacgcaaa
    12421 aaatacgaga acaattataa ggagttttca tgtgtagttt ttcttttgaa gtttttccac
    12481 caagaaagga tgaaaatatc aaaaatcttc atgctatctt agatgattta gggcaattaa
    12541 gccctaattt tatcagcgta acctttggag ctggaggctc tattaactca caaaatactt
    12601 tagaagttgc aagcttaatc caggaagaat atcaaattcc tagcatagtg catttacctt
    12661 gcatccattc tagtaaagaa aaaatcactc agatacttca aaaatgcaaa gaaaaaaatc
    12721 ttaatcaaat tcttgctcta agaggcgata tatgtgaaaa tttagaaaaa agtaaagatt
    12781 tttcttatgc tagtgattta atttctttta taaaaaaaca agaatacttt gaaatttatg
    12841 ccgcatgcta tcctgaaaaa cataatgaat ctaaaaattt catcgaggat atacaccatc
    12901 ttaaaactaa ggtaaatgca ggaacagaca agctcattac tcaacttttt tacgataatg
    12961 aagattttta tacttttaaa caaaattgtg ctttagcagg tattgacata cctatttacg
    13021 caggtattat gcctattact aacaaaagac aggttttaaa aatttctcaa ctttgcggag
    13081 ctaaaatccc tcctaaattt gttaaaattt tagaaaaata tgaaaataat gctttggctt
    13141 tagaagatgc aggtatcgct tatgcttgcg atcaaattgt cgatttaatc acaagtggcg
    13201 tagatggaat tcatctttat actatgaata aatccaaagc ggctattaaa atttatgaag
    13261 ctgtaaagca tttgcttaaa gaagagcttc atgcttagaa aataaactat tttttgcttt
    13321 tatcttaact tattttcatt ttttagctta tggttttcta taagtaaaac aaaaattaaa
    13381 gataaaagca aacctggtat aatacccaag caaagataga aaaaagaatt atatttaaaa
    13441 aagaagaaaa gtgcaccaaa aagcattaaa gctaaagatg cacctttgaa aaattctaaa
    13501 atatagatca atgaccttcc tcaacaacag ttgcacccgc taaatataca taagttaaaa
    13561 tcataaaaat aaaagcttgt aaaaatgcca taaaagttaa aagcacataa gcaggaagtg
    13621 gagctatgta aggaactaaa gctaaaatta ccattaaaaa taaatcgtcg cctttaatat
    13681 ttccaaacaa acggaaggac aaagaaacca cacgagaaag atgagagact atctctatag
    13741 gaaacaccaa aggagctaaa agtttaatag gtcccatgaa atgagcaaaa tactttacaa
    13801 aaccttgtgc cctaataccc tcaaaatgat aatatacaaa aactataata gccaaggaca
    13861 aagtcaaatt taaacttgca gttggagcgt gaaaaccagg tattatacct ataatattac
    13921 taaaaaacac tataatcccc aaagttgcaa ccaaaggaag atattttctt gcaccttttt
    13981 cacttcccat ggtatctcta cccatagata aaactccctc taaaaaagcc tcacctaaat
    14041 tttgcatacc gcgtggaaca agttgcatag aacgagtagc catcatagcc actataacag
    14101 caattaaagc taccaaacct atgtgaaaaa aataagaaaa agtatgactt gcatcaagca
    14161 aagagctaaa taaaaataaa tctttcatgg tttcctcaaa aattttattc taaactcgga
    14221 attctagcaa aatcttactt atattttaat gaaaatttac atccattcta aaacttgcga
    14281 aagttcttta gcaacaaaac acttaagccc tatatcttcc aaaggcttag aaggaacaat
    14341 ggcattttta aatttttgca ttttagcttc ttttaaacgc gtatcaaggc taaaaacctc
    14401 tctaatttct ccatttaaac taagctcccc tataaaaata ctatctttgc tcaaagggcg
    14461 atttttaaaa cttgaaataa tcgcagcaac cacagccaaa tccgcagcag tttcacttac
    14521 ttttactccg ccgctaatat ttacaaatac atcataatgc cctaaaggaa tttcaagttt
    14581 tctttcaagc aaagccaaaa gcatatctaa gcgatttttt tcatatcctg tagcgctgcg
    14641 ttttggataa gaactttcgc acactaaagc ttgaacttct aaaaccaagg cacgagatcc
    14701 ttccatcaca acacctaaag cacttcctga aatagccttt ccacgagtaa aaaaacgatt
    14761 tgccaaatct tttgcactga tcaaaccctt agcagtcatc tcaaaaatac ctacttcatt
    14821 cgttccacca aaacgatttt taaagcctct taaaagtctg atttctttag tggcatctcc
    14881 ttcaaaataa agcaccacat ctaccatatg ctcaagaacc ctaggccctg ctatagcacc
    14941 ttctttagta atatgcccta tgataaaagt actgatatta taagccttac tcacacgcat
    15001 aagttcaaaa gtaatctcac gcacttgagt gatgcttcct gctgctgaag taattttatt
    15061 tgaatataaa gtttgtatag aatcaatgat aagaatgcta taatcttttt tgtgcaattc
    15121 ttctaaaata ttttcaaggc aaagttcagt aagtaaaaat aaattcggag tattagcctc
    15181 aagacgatca gctcttaatt taatctgagc tttactttct tcgccactga cataaagcac
    15241 ttttttaccc tgtttagcta aatttgaagc aatttttaac aaaagtgtag attttcccac
    15301 acctggactt ccgcctataa gcactaaaga accttcaaca agccctccgc ctaaaaccaa
    15361 atcaagctca ttatcatctg tgctgtatct tgtaaaatgt tctaactcca catcttcaat
    15421 acaaacagcc tcacttgttt tcatactaac ttgcgcaagc tcttttaaaa ctttaatttg
    15481 ctcagctttt aattctacaa aactatccca agctccacaa tcaggacatt ttccaagcca
    15541 tttgctttgt tgatttccac aagcttgaca ttcaaaaagt gctttatttt ttgccattat
    15601 tcaaaaatag gatctaataa agtatctaag taagcacttg cattaaattc ttgtaaatcc
    15661 gtcatttgct cacccacgcc tacataaaaa ataggaagct caagctctct tgctatacta
    15721 aaaagtgcac cccctttagc tgtcccatca agctttgtaa taatcacacc atcaagtttt
    15781 acaagctcat taaaagcttt agcttgtaaa attccagcat ttccctgtgt tccatctaaa
    15841 actaaaattt ttctatgggg tgcgccttct aaagctttgt ttgaaattct tacaattttt
    15901 tcaagctcat gagctaaatt tttttgattt tgcaaacgcc ctgctgtatc gataataact
    15961 ctatcaaaat cctttgcttt tgctttagaa atggtatcaa aagcaaccgc tgaaggatca
    16021 tgcccttgtg cagttaaaac tatatctaca tccacttttt gcgcccaaag ttttaattgc
    16081 tcaatcgcac ctgctctaaa agtatcacac gcccctaaaa tcactttttg attttggttt
    16141 ttgtataaat aagcaagctt ggcaatactt gttgtttttc ctgctccatt tactcctaaa
    16201 ataagctcta caaaaggttt ttcttgattg gtttcttttt tttcataaag aaaataagaa
    16261 cccataacac gctttaaatc ttcttttttt acttcatttt gaggtggtaa ataataaatt
    16321 atctcttcaa ctatttcata acttacatct gcttcaagca aaatttcttc aagcaaatct
    16381 ttggttattt ttttgttctc tcctttaact ccaacaatat tttcaagagt ttttgcaagt
    16441 ccttttttaa aaaaattaaa cattaaagta tagccttttg tatatcgatt tctagcattt
    16501 cttcaggaat aagccctaaa tactgattaa tcaatttaga atgcttgttg taaagaaaca
    16561 tagtaggaat tccatttacc ccgcctaaag ctttagctaa aagatagtta ttttcaccat
    16621 tagcgacttt ataagatatt ttatgctgtt ctataaattt ttgaatctca tcgttagatt
    16681 tatcttctaa taaaactcca actatgttaa aatcattatt atacttttct tgtaatttat
    16741 taagatgagg gatttcagca atgcaagggg tacaccaagt agtaaaaaat acaaacaaag
    16801 ttgccttatc ttcatcgttg aaatttaaaa cggcattttc ttttttaact gaaattgatc
    16861 ctccatcaat caaattaagt ttaaaattca tatcatcact ttgattgata cttgcctcgg
    16921 tacttaaatt tacatcattt tgctgctttt ctttatcatt gccacaagca acaaacaaac
    16981 aagatattgc cactagtaaa agtatttttt taatcttcat tatttatcaa tcctttattc
    17041 ttctttataa aaatgctaaa attataacat acataagata atattttttt aaaggcatat
    17101 taatggaaaa aacagatttt agggcattgc aaaaaatacg ccttttcaaa cattcaaaac
    17161 taaatttcaa acaagattat aaaatattta aagaatgtct taaaataata aaactattta
    17221 aagctaaaaa tattttaatt tttattcctt tgcattatga accaaactta ataaaatttc
    17281 gccatattct taataaaaat tacaaacttt ttgttccatt tatgcaagat aaaagtttaa
    17341 aaattgtaaa attaagattg ccttttatta aaaaaaggtt tggggtttta gagcctatag
    17401 attctttttt taaagcaaaa attgatttag ctattgtgcc tgtaattggc gtcgataaaa
    17461 atttaaaaag aataggacat gggcaaggtt tttatgatag attttttgaa aatttaaatt
    17521 acaaacctca tataatattt gtccaaagta tagatgcttt aagtcaaaat aatctaacac
    17581 aaaagcatga tatttcagga aaattataca taaaccctta taaaaaatat tacaagaaag
    17641 aaagaaaaaa tgatagaatc acttatcgca cttatagccg ctatagtcgg actcggtata
    17701 ggatatttag ttgcaaaaaa aatcaatgat gccaaatatg aaattttcgt agaacaagct
    17761 aaagccaaag ccaaagctat agaatacgaa gcggagctta ttttaaaaga tgcaaaaaat
    17821 tcaattctta atgcagaatt agaagttaaa aaaaaatacg aagaaaaaac tcacaaaatt
    17881 caaaaagatt ttaatcaaaa atttgatgat ctttctaaaa aagaacaaaa acttcagcaa
    17941 gaagaagaaa aactaaaaga agataaagaa tacctttgca agtcacaaaa acacattcaa
    18001 gacttacaat ctgatgttga taaattaaaa aataaatatc aagaaaaact tgacgatgtt
    18061 ttaaaaattt tagaacattc tacaggactt acgcaaaatg aagccaaaga aatcattctt
    18121 aaaaaagtag aagaaaattc tcgcgagcaa attgcacata tagtaagaaa atatgaagaa
    18181 gaagcaaaaa atgaagccaa aagaaaagct aacttcatca ttgctcaagc tacttctcgt
    18241 tttgcaggtg aatttgcagc tgaaagactt atcaatgtta ttaacattaa aaacgatgaa
    18301 cttaaaggac gtatcattgg taaagaaggg cgcaatgtta aaaccttaga aatggtttta
    18361 ggtgttgata ttatcatcga tgatacacca ggtgctatta tagtaagttg ttttaatctt
    18421 tatcgccgtg ctattgctac aaaagttata gaacttttag ttgaagatgg cagaattcaa
    18481 cccgcgcgca tagaagaaat tcacgaaaaa gtgtgtaaag aatttgatag tgctattcta
    18541 gaagaaggcg aaaccatagt tatggatcta ggtttaaata aaatacaccc tgaaattgta
    18601 aaactcatag gaaaactcaa ataccgagca agctatggac aaaacgcttt agcacattct
    18661 ttggaagtgg ctcaccttgc aggaatcatt gctgctgagt gtggtgggga tgagaattta
    18721 gcacgtcgtg cgggaatttt acatgatata ggaaaagcat taacccacga ttttgaagga
    18781 tctcatgtgg atttaggtgc agaactttgc aaacgctata aagagcatcc tgtagtaatc
    18841 aatgctattt acgcacatca tggacacgaa gaagctacaa gcatagaatc agcagctgtt
    18901 tgtgcagcag atactttaag tgctgcacga cctggagcta gaagagaagt attagaagct
    18961 ttcttaaaaa gagtcagtga gctagaagat atcgctaaaa gtaaagaagg aattaaaaat
    19021 gcctatgcaa tcaatgccgg aagagaaatt cgcgtcatag ccaatgctca gcttgttaat
    19081 gatgatgaaa gtgtactttt ggctaaggaa atagcagctg aaattcaaga aaaaatgcaa
    19141 tatcctggtg aaattaaagt caatgttata cgtgaactta gagctgtaga atacgctaaa
    19201 taaggtttat tatgcaagat atgattgata ctttaataaa atatggttat attgttttat
    19261 tcttttactc tttagggggc ggaatggttg gaattttagc cgcaggagtt ttaagttctc
    19321 aaggaaaaat ggatcttagt ttttgcattg ctcttgcttt tattgctaat accataggtt
    19381 caactttgct ttttatactt ggaaaatatt acaaaaaaga tattatgcct tattttaaaa
    19441 aacaccgacg caagctagcc cttgctatga tgaaaacaaa acaacacgga attattttac
    19501 ttgtaactca aaaatttatt tatggtttaa aaactttcat tcccatagct gcaggtatgg
    19561 caaaatataa ttttattaaa ttttttatta tcaatactct agctagtttg gcatgggcta
    19621 ttgttctagg ttttgctgct tatacttttg ggtatgttat tgaagcaatt tttgataaac
    19681 tgagtttata tccttatgcc gctcctttat ttttattatt tttagctgga ataatttggc
    19741 tttatttaag taaattttct aaaaaataat gtctctatgg aattcttttt tttactcttt
    19801 taaagaattt cattatttat ttttatctgt tgttattatt tttattttta atatcctttt
    19861 agaatataat aattttttaa aatttaaaaa ccaaaaacat tactttataa ataacgctct
    19921 attaacgcac caatatacaa aatataataa aaaaaataaa aaatactggg ttttaaagtt
    19981 acaaactgaa aacttcactt tttatactac aagttttaag gatttaaatt taagcaagaa
    20041 tcaactttta agccttagaa ttatcaccca taatattaac tttaaagact atctgagcaa
    20101 aagtttttat gcaccttctt atgattttga aaaattaaaa gaaaaagaat acaatcccat
    20161 tatatcttac ttcttaaatc aacatacaaa tgaaaaaatt aaagaatttt atggtgcttt
    20221 attttttgca ctgcccatat ctttagagct tagaaacgat gtaaattact atggcatagc
    20281 acaccttata gcaattagcg gttatcacat aggcttgctt tttagtttaa ttttctttat
    20341 tttagctcca atttatagtt ttttccaaaa aatatatttt ccttatagaa atttacgttt
    20401 agatttaagt attttaattt ttacactact tttagcttat gcttgtttaa taggatttat
    20461 cccttctttt gtgcgctcct tgattatggc tttttgggtt ttttatctat tgtgcaaaaa
    20521 tataaaaatt attaatttct ttacgctttt ttgtagtatt ttattgtgca tttctcttta
    20581 ccctagactt ttatttagta ttggattttt attttctatt ttaggtgttt tttatatttt
    20641 tttatatatg catcattttg caaataaatt taataatctt ataaatatta ttttgcttaa
    20701 tatttggact ttttttgcta tggttttacc tgtgctttat ttttttccac ttataagcta
    20761 ccaacaaatt ttaggtatta ttttgagtgg aatttttgta atattttatc ctttagtatt
    20821 atttttgcat cttataaact atggagattt gctcaatttt atcttagatg aattttttaa
    20881 atttaaaatt tatggaacta atatctatat cccattttgg atttttataa gttatcttat
    20941 tgcttcttta atctctgtac gatttaaata tctagctttt ctttgtattt ttgcgaattt
    21001 tattcccttc attatgattg taatttagaa aataatagag tttaagccca aaaagataaa
    21061 taatccaaga aatataaatc caaataaaaa agaataaaat agtagaaaaa gatccataaa
    21121 cactagcgta tgttttatta tataccacat aatatacaaa taaatttttt cctatatacc
    21181 aaatagcacc cgctccaaaa gatactaaag ctaaactttt aagagttccc ttatgaacag
    21241 aacttgaata agatataaaa aataaacccc aaataattac aaagggtaaa atttcaaaaa
    21301 aattaaaccc tattttataa tcatctaaag tttgttggat aaaacctgaa atataaaaac
    21361 taagcccaag ccccaaagga acaagagtta aaagagtcca ataagaacta atgctttgcc
    21421 aaagtccttt aggttcattt ttagtaatac gattgattac aaaatcatag cctgaaaaaa
    21481 aagctaaaga agtaaatgcc atagcaataa gacctacaat acccaaattt acactatttt
    21541 ttaaaaaagt atcgatgtag gtagcaacaa catcttgttg cgttggtatt aaaaaagcaa
    21601 aaattacttg ctttgctttt tcataataag ctttaaaact agaaatttgc gtaaaaacag
    21661 aaaaacatac aaataaaata ggtattaaag ataatacagt ataaaaacta agcgctgctg
    21721 cataatttaa aatttcctta tcacgcaaat ttagcaaaat agtaaaaaaa tttttcacct
    21781 tctaaagtcc cattttaaaa ggatttagta tattatttgg atcaaaagct tttttaatat
    21841 ttctcattaa attcatttcg gcttcagaaa aagctaaatt cataaaaggt gctttagaga
    21901 gtccgatacc atgctctccg cttaaagttc ctccaagttt cactgttaat ttaaaaattt
    21961 cttccacagc ttcatagcct tttttcacct gctctttatc atttttatca ggaaccataa
    22021 cattagtatg cacatttcca tcccctgtat gtccaaaaca aggaatttta aaaccatatt
    22081 ttttagaaat ctcatctata ccttcaagca aagcaggtag tttagaacgc ggaactgtaa
    22141 tatcttcatt aagttttaaa gttccataca tggcaatgct ttgagaacaa tttcttctag
    22201 caaaccaaat atctgcggtt tcttgttcat cttttgctat tttaaattca ctagctccag
    22261 cttctaaaaa ataatgttct aaatttctta aatcctcatc aatagcctct ctaacattac
    22321 catccacatc agcaatcaaa atagctccag cttctatagg caaacctttg ttaaatttac
    22381 tctcaaccgc tctaatgcta agattatcta aaaattccat agacacagga tttacgccac
    22441 tagcaagact tttataaacc gcattcatag cactttttac acttggaaaa atagcaaaag
    22501 cagttttttt gaatttaggt aaaggtatta attttaaagt aagctcactt aaaactgcca
    22561 aagaaccttc actagcgatt aaaattcctg ccaaattata acctgctaca tctttaatag
    22621 tgcgttttcc tgcacgaatg atttctccgc tagacaaaac agcccttaaa gccatcacat
    22681 aatcttttgt aatgccatat tttgcagctc tcattccccc agcattttcg cttacattac
    22741 cccctaagct agaatactcc atgctagcag ggtcaggcgg ataaaaaagt ccgtatttag
    22801 ccacttcttt ttgtaaatgt atattaataa ccccaggttg cacaacagcc actaaatttt
    22861 caagatcaat ttccaaaatt ttattcatat gcttttcaaa agcaagcacc acaccgccat
    22921 taacagctaa agctcctcct gtaaaaccag atcctgagcc tcgtggtatg actatgatat
    22981 tattttcatt gcaaaatttt aaaatttgag caatatcttc ttcatttctt ggaaaaagaa
    23041 ccccatcggg taaataatgt ttttttgtcg catcatagct ataagctctt ttgtgaattt
    23101 catcaaaata agcgttttct tctcctaaaa atcgtttaaa atattgttca aattcttttt
    23161 tcatgtttat tgcaccttag gaagattaat caaagcatca taatatctat aataattccc
    23221 tatttcttga gagttaaaat caaaaaaatt acttttatat ccacctatac gagaataaaa
    23281 aggaacctga acgctagttg gcttgcttat aggcacttca taaagcttat taaaatcttg
    23341 acaatccaca acttctgcct gattttccaa agccacaacc aaaatgccaa ccgcattatc
    23401 atcacaaaat tgcctaaaat ctgaacgctt aggagaaaga gtggccgttc taattaattg
    23461 tgctccaaaa atgtcaatat gggtaaaata tatctgcgga aattctctaa caagttcatt
    23521 ataagtttgt tcatcaggag caattaccaa tcctctatca taaagaaaat ttaaaacaac
    23581 ctcatcacct actttaggta aaacatttgg taaaggcaaa gcatcttgct taagagctga
    23641 aaaaacacta aattctaatt ttgccaaacc atttttttta tctataacac ttgctctagc
    23701 gatgatactt tgcgaattgc taaaatgttg cactactacg ccacttgaat aaagttttat
    23761 atcatcacta tctttaatat aaccataaat atcatcaact tttacaagtt cactttttat
    23821 aggttttaaa tcaaatccaa ccgcaaagag gctaaggttt aaagctaaaa aacacactat
    23881 agttttaaac aaatttgctc cttaaataaa aatttataga attataatcc ttttttgtta
    23941 agcaattgta agaaaaataa agtaaaatat agctttcaaa tttcaaaatt cttttaaaaa
    24001 ttaaggttat ctcatgaaaa aattattgct tttatttatt tttgttgttc aaagttttgc
    24061 agctttaagt gttgaagagc taacttggga taatggagat accttgctta aattcttaca
    24121 aagaaattcc atacctatgt cgctttatta tggacttgat agagaagatc aagaacttgc
    24181 ttctgatata gcctataaaa taaaatatca agttttaaaa gatgaaaaca acaacataga
    24241 acaagtttta attccaatta gtgatgattt acaaattcat atctataaag ataaagatgg
    24301 acaatacact cttgctttta ctcctgtatc ttatcaaaaa gaagatagaa ttttacattt
    24361 aaccattaaa agctctgctt atcaagatgt ctatgaagaa agtggtagca gtactttagc
    24421 tcgtgctatg gttcgtgctt ttcgaggaag tataaatttt cgcaatatcc aaaaaggtga
    24481 tgaagtaacc ctatattatg aacaaaaaag acgcatgggt aaactttggg gcgatataaa
    24541 tataaaaatg gcaatggtag aaattaataa aagcgctaga gaagtctttt cttataatga
    24601 tatattctat gatcgcgatg gcaaagaatt agaatctttt ttacttacaa aacctgtgaa
    24661 ctacactaga atttcctctc cttttacaac agcaagatat catcctatat taaaacgcta
    24721 tcgcgcccat cttggtatag actatgctgc acctactgga actcctgtaa aaagtgctgg
    24781 caaaggagta gtaaccttta taggcacaaa aggtggttat ggaaatgtaa ttcaaatcaa
    24841 gcatgactca ggttatatga ctttatatgc tcatcttagt cgttttgcaa aaattaaaaa
    24901 cggacaaaag gtaaatcaag gacaagtaat tgcatatgtt ggttcaacag gtatgagcac
    24961 aggtcctcat ttgcattttg gagtatattt aaataataaa gctataaatc ctgcatctgt
    25021 tgtaaaaatc gccaaatcag aacttagtgg aaaagcaaaa gagaatttta aacatatcat
    25081 agctggatac gagcaggttg ttaaagaagc cctagcctcg aatcaaccta atcctccaaa
    25141 agaagaagat tttgaaaact atatagaatt ttaattactc aacaacgctt tatcttttgc
    25201 attgattaaa gaatttagaa gagttgcaag ctcttctttt tctttttcat taatttcaca
    25261 aaaatctgca tcaatcaatt gttttaccaa agcttcattt aacaaatctc catcgccaaa
    25321 ttctctagct ttttgaatga tttttaacac tcttaaatct tttctttcat acattttaat
    25381 cctttaaata aaccacactc acaaaacgct taggcgtttt atcacgacga taagaaaaaa
    25441 aactctcatc atcaaaacta caaattccac aatctttaat attttcaatg cctaaatttt
    25501 gagcttgaaa ttttactaaa gcttttaaat caagtttatc atcttgaaca aattctttaa
    25561 attctttttt agcaaattct aaaatttctc catctatttc ataattttta gcacaaattc
    25621 caggcaggat aaaaagatga aatttattct tatctaaatg tgaattttgc atagtaattt
    25681 gatcaacgca ttcttttagg atattttcaa agcttccttt tctacctgaa tgcaaagctg
    25741 ctataatgcc gctttcatga tataagatca aaggcagaca atccgcactt aaaacacaaa
    25801 gagcgatatt tttttcttta cttataagcc catcacagct aagatttttt aaattttttt
    25861 cataaatgat aactttatga gagtgaattt gatccataaa aacacatttt ttaatatctt
    25921 taaaacctaa atgataaaat aaattctcac tataaacctt agctctaaaa acattataat
    25981 ccttatcaaa agcacaaaaa ataacgactt tatcattttc taataaagat aagaaattct
    26041 ttcgacttct tcccatgata atcctttgtt tttaccttgc aattgtgcat aaatataacg
    26101 agcaagtaaa tcactttcta tatttatttt tctacctact tgatagtctt taaaaagcgt
    26161 ttctttaaaa gtaataggaa taatagtaag cctaatacca ttttttaaaa tttcattgat
    26221 agtaagactt actccatcaa cagctatact tcctttttct gccataaatt tcatagcttc
    26281 tttaggtaaa gatatataaa aatccactcc attttcatct ttttgaatct tttcaagtgt
    26341 gccgataaaa tcaatatgtc cttgcataag atgcccatca attctatcgc catatcttaa
    26401 agcaggttct atatgaactt tatcttttaa attctctata gctatatgag tgcgactttc
    26461 acgagaaagc tccacttcaa aacccccttc ataaagtttt gttacactta aacaagctcc
    26521 atttacggct atgctatcgc caagatttgg gcgatatttt gcttttaagc ttaaagtatt
    26581 gttttgataa gattgaactt tagcaatttc tcttatgagt ccattaaaca ttttttacct
    26641 taaaaaatct tatttaataa tttattcacc gctttatcaa ctttatcgcc cgtactttta
    26701 gcaccatcac tcacaccgcc acctactaca tttttaatag aatttaacac acttcctgca
    26761 tttaaattca ctttaggatt ttccgtagtt cctgtaatac ttcctttaaa attggctcta
    26821 tcgagtttaa tatcaaaagg caaatttaaa gctccgcttt tagaatttaa agctcctgat
    26881 tgtactaaaa tataagaacg atctgcttgc atattaagat caagtttgat attttctttt
    26941 ttaatcaaag ctttagcatt agcagtgcga taaacatcat tggtaatatc ttttagtgtt
    27001 aaaattttta aagcattggt aataagattt ggttttaatt taccctcttt catatccaaa
    27061 ttaacctctc cttcttcact taaaagattg taatttgcct tcacatctgc cttaccttga
    27121 taaacatcca taaaatctaa accttgagct agactactta aatccactcc atttaaatca
    27181 gcaagcaaaa ggttatcttt aagtgtgctt tgaagcctcc cttcaaataa atttggacta
    27241 tttacaacaa aatttaaact cttatcaaaa cctacctttc cattaaattc tgccttacct
    27301 ttaagttttc tatccaacaa aaagcctagt tttgaaaaat catttatctt tagattaaaa
    27361 tccgaattta aaagcatttt gcttatgtca aaacttcctt gtagctttgt aagatcagct
    27421 aaagatgaat ttaaaacaga atcaaattga gcgatattgt ttttaaaatt aattttggta
    27481 tttaaatcat aacttgtatt gtttggaaaa tttttattta aaattttact taaagttgta
    27541 gcatttaaaa tacctttagc ttctaaattt gctttaccat taaggttgtt aaaatcgata
    27601 ttatctaaat taatttttgc attaacaatc ccactggcat aatttggcat acctgctata
    27661 acaaaaagtt tagataaatc aagtttatca atgtttaaat caagtttttt accatttgaa
    27721 tcagccttga ttacaccatc tgccaaattt gcatttgcat ttaaattttg tatttgagtg
    27781 cctataatat gagcttttgc agcaagatct gccttgcctt gtaatttttg tcctgctata
    27841 gcactaaact gagataaatc atcgataaaa gcatttaaat ctgtatttaa ctcactattt
    27901 tttaaattat aacttccttg aagttttttg atattaagca aatttgaagc aagcaaagca
    27961 ttgtaagcaa tattgctatt ttttgcattt gctttagcgt caaaactaaa aattgtattt
    28021 ggaagctcta ttttagctat ttttttaagc tcattggtgt taagttttgc attgtttatt
    28081 tttgcttcaa gatcaaaatt agaaaaatcc aaatctgcat ttagaagttt agcatttaaa
    28141 tttccagaaa ccaaagctcc atatcctgca agagctaata atttttccaa acttgcttca
    28201 ttaatatctg caaaaatttt attatttttc aaacttgcct ttacctctcc accaagtccg
    28261 ataacttgag catttaaact tgataaggca ttatttacaa cacttgtttg acctatcaca
    28321 cccaaattac catttagtct agtttttgta agtgtttcaa gctttacaag agaaggaata
    28381 cttaaattaa aatcagtact taaagcattc ttgctaatat cataaagagt tttttgggtt
    28441 tgtaagttaa gataatcatt gtaaatttta cttacagcat aaatcttatc ttctttaaca
    28501 ttggccaaaa tttctgcttt aggattagaa tttaaaggca agtctaaaga aaaatctttt
    28561 tttatcgcct catagtttat ataatttgta tcaagtttta tgatgatatt cccatcaggt
    28621 tttaaattct gtgctgaaat ttttgcttga gcatttaaaa aacctttagc gtaactaggg
    28681 taagataaaa gatgaagtat ttcttctatc ttaagatttt gcgcatctaa atttaaagca
    28741 atagggctat aattatacat tcttgcattt aaaagtacat ttgaacctaa caaataaccc
    28801 tttccatcta aagtaaaatc acttgcttta ccttgaatct taccgacaaa agaaaggttt
    28861 tgatttaaat ttaaacctaa atttttagca taattttgat ttaaagaaat aagatagtca
    28921 agatcaaatc caagcttaaa aggactcaaa gctcccttaa gattaaaatc tgccatattt
    28981 gcgatatttg cttgcaattc aagacttgaa aaacgtaaat taaaatgcgt gatatttaca
    29041 tctaatcccg cactttcttt gatctttttt tgcgctatat ttgccactat attattacca
    29101 aaacttgtga aaagtatggt ataaatagca attaaaagca caacaacaaa agctataact
    29161 ccataaaaaa tctttttcat ttttatcctt tagtttattt tataaaataa ctttagtcta
    29221 taaaactaaa cttttataaa tattttaatt taaagtattg acaaaattca ttttttatag
    29281 tatgatatta tcactctaaa taaaagagtg ctaaaatcaa tatttttaag gatggacaaa
    29341 aatgaatttt caacctttag gaaagcgtgt tctagttaaa cgcgtagaag aaactaaaac
    29401 aacagcctca ggcataatta taccagataa tgctaaagaa aagcctttaa tgggtgaagt
    29461 agtagcagta agtaaagaaa tcactgatat tgcaaatggt gataaaatcg tgtttgctaa
    29521 atacggtgga acagaaatta aacttgataa taatgaatat ttagttttaa atttagatga
    29581 tatcttagga attttaaaat aatttataaa aaaggataaa aaatggcaaa agaaattatt
    29641 ttttcagatg aagcaagaaa taaactttat gagggcgtta aaaaacttaa tgacgcggta
    29701 aaagtaacta tggggccaag aggacgcaat gttttaatcc aaaaaagctt tggtgctcca
    29761 agcattacta aagatggcgt aagtgttgct aaagaagtag agcttaaaga tagtcttgaa
    29821 aatatgggcg cttcacttgt aagagaagta gcgagtaaaa cagctgatca agcaggcgat
    29881 ggaacaacta ctgcaacggt tttagctcat gcaattttca aagaaggttt aagaaatatc
    29941 acagcaggtg caaatcctat tgaagtaaaa cgcggtatgg ataaagcttg cgaagctata
    30001 gtagcagaac ttaaaaaact ttctcgcgaa gtaaaagata aaaaagaaat tgcacaagtt
    30061 gctacaatct cagccaattc tgatgaaaaa atcggaaatt taatcgctga tgctatggaa
    30121 aaagtgggca aagatggtgt tatcactgtt gaagaggcaa aatcaatcaa tgatgaatta
    30181 aatgtagttg aaggtatgca atttgataga ggttatttaa gcccttattt tatcactaat
    30241 gcagaaaaaa tgacagtaga gctttcaagc ccttatatct tgctttttga taaaaaaatt
    30301 gcaaatttaa aagatttatt accggtttta gaacaaattc aaaaaacagg caaaccactt
    30361 ttaattatcg ctgaagatat tgaaggtgaa gcacttgcaa ctttggttgt aaataaactt
    30421 cgcggtgttc ttaatatttc agcagtaaaa gctccaggtt ttggcgatag aagaaaagct
    30481 atgcttgaag atatagcgat tttaacaggc ggagaagtga tttctgaaga acttggaaga
    30541 actcttgaaa gtgcgaccat acaagatctt ggacaagctt ctagcgtaat catcgataaa
    30601 gacaatacaa ccatagtaaa tggcgcaggt gaaaaagcaa atatcgatgc aagagtaaac
    30661 caaatcaaag cacaaattgc tgaagcaact tcagattatg atagagaaaa attacaagaa
    30721 agacttgcaa aattaagtgg cggtgttgca gttattaaag taggtgcagc aactgaaact
    30781 gaaatgaaag agaaaaaaga tcgcgttgat gatgctttaa gtgctactaa agcagcagtt
    30841 gaagaaggta tagtaattgg tggtggtgca gcgcttatca aagcaaaagc taaaatcaaa
    30901 cttgatctac aaggcgatga agcaatcggt gcagctatcg ttgaaagagc tttaagagca
    30961 cctttaagac aaattgctga aaatgcaggc tttgatgcag gtgtggttgt aaatagcgta
    31021 gaaaatgcta aagatgaaaa tacaggcttt gatgctgcaa aaggtgaata tgttaatatg
    31081 cttgaaagtg gaattatcga tcctgttaaa gtagaaagag tagctttact caatgcagtt
    31141 tctgtagcta gtatgctttt aaccacagaa gcaacaatta gtgaaattaa agaagataaa
    31201 cctgctatgc cagatatgag cggtatggga ggaatgggtg gcatgggcgg aatgatgtaa
    31261 tatctgctcc aacctcttat cagcaaggat tttccttgct gattaccaat ttaatttaaa
    31321 aacactccct tgattttcta cagattcgca aataatctta atatcattat catcacaaac
    31381 tttttttacc aaagaaagcc ctataccaaa tcctccttga tcagtattaa atcttgtata
    31441 cctatcaaaa atatgattta aatttgactt tgaaattcca caacctgtat ccgcaatact
    31501 taaaaaattg gcttttaaaa ttatagaaat tactccacct tttttattgt atttaatagc
    31561 attgcttata agattatcaa tcaatttaga aatttgactt ttaggagcaa aaatatttgc
    31621 ttgatttaaa tcaagcttta gtgtaatttt tttttgctca aaaaatactt taaaatattc
    31681 caatctttct tcaagtagta ttcttaaatc aaatttttgt ttttctgttt ctaaagtatt
    31741 agggaaatta taaaaaacaa gatcagaata cacttgagac aaactttttg cagcaagctt
    31801 aatccttgta aatttagcat tatctcctaa attttgatgc tcaagttgtt ctatactcat
    31861 caaaataaca cttaatgggg tattgagttc atgagttgaa tctttaataa aacgatttag
    31921 tgtgctgatt ttatcctcca aaggctttag agcaattttt actaaaatat aagatattaa
    31981 acccaatatg caaaaagcca taatagcaaa accaaaaact ttcgttctaa tccaaaaaag
    32041 atctttgcta acatcttcac cctgtattaa aatttgcaaa ccatcgttag tatttacttc
    32101 ttcattgcta gcatgtctta aaaaataatg atctgcactc ataggagcaa ggaaaaaaac
    32161 cttattatca caaatacctc tacctttaag ctctatcttt gcttttctta aatcaaaatc
    32221 tatattacta aaaacaatct ttttagcatc aaatatagca aattttagcg ctgtgctttg
    32281 agcaatattt tttgcactta tatctatagg ggtaaaacga gaatttaaga tgcttataac
    32341 aatatttcta tgattttctc tcaaagtggc gccctttaaa acaactaatt cttcatataa
    32401 tttttgatac cataatgcaa aaaaaatagt taaaaaaata cctgtagttg ttaagtagat
    32461 taataaaatt tgcctaatga cttttttagc catagcaata tcccctgcct ctttgattta
    32521 taattttttc ttttcctaaa attttacgta aattttttac ataagctctt aaacttagct
    32581 cactaggctc ctcatcataa tcccagagtt cttcaaaaat tctctctgtg cttaaaaagt
    32641 tgtttttatt tttaagtaat aaagacaaaa gcttaatttc tttactcggt aaagtcaagg
    32701 ctttattatt atggtaaaga atttgtgtag taaattcaaa tctaaatcca tctcctaaat
    32761 cttcaaaatc ttcattttta tgtgaaaaag ctcttttaag caaagcttta accctgatag
    32821 ataactcggc aagttcaaaa ggttttttta tataatcatc acaacctgcg tcaaagcctt
    32881 gttttaaatc gtttgttgtg tttaaagaag tcatgaaaat tgctggagtt tgctttccgc
    32941 tttttcttaa ttctttaagt aatgaaaatc catctcctaa aggaactttt acatctaaaa
    33001 tccaaagatc aaaatatctt tcataagcca tatctaaagc ttcttgtgca ttatcgcata
    33061 aaaatacttc atatccttca tcgtttaaaa actcttcaat gatctcactc aagctcaaat
    33121 catcttctaa aagtaaaatt ttagcagcca taatttaaat ctttctaact tcaaatctct
    33181 taaatatata tcattgtatc aaaattctta tcaattattt aataaaattt catttttatt
    33241 taatttattt ttatctataa tccttttata caaataaatt tttccttaag gagttaaaat
    33301 gcttccaaaa tgggataaca gctatagtgt gcacaatgct aaaattgatg agcaacataa
    33361 aaagcttttt gaacttgctg caaaagttga agttgtatca gatagatctg taagtaaaaa
    33421 tgaagtcaaa gaacttttgg ctgaattttt taattatatg aaagatcact ttaatgatga
    33481 agaaaaatac atgcagctaa taggctatcc aaatttagaa gaacatcgaa aaatacataa
    33541 agaaatcatc caaaccatga tcaacttgat caaagatatc aaatcaacca atgatcttaa
    33601 agaaaaactt tatatagtgg ctaaaaagtg gcttttagaa catatactat atgaagacat
    33661 gaaagttgaa aaatggagaa gttcttcttt gtctacagat gatggtggtg atgttagctt
    33721 tgaagcagca gaagatgaag ataatgagca tccacaattt tatctttata cctgtaattg
    33781 tcctggtaaa attcacgatg ttccttatag cattcatcaa aaaatagaat tacaaggtca
    33841 taaatttact tgtaaaactt gtaaacaagc tataaaattt tacaaaaaac attcttaagg
    33901 aggataaaat gaaacgcaat gtaaaaactt attcttttag aatgccttta gagcttaagg
    33961 agcgtttgga taatttaagt aaaaatcttt ctaaaccaaa atcagccata gtaaaagaag
    34021 ccatagaggc ttatcttaat gaagttgaag atttttcttt tgctgttaat gccctagaag
    34081 aacttaaaga tggggattat caaaaggcaa gtaaaaaaat agataaaatt gtcaaaaatc
    34141 tccaagaaga ttctaacgat aacgaacttg gtgattttga ttttgctatt gaagctttag
    34201 aagaacttaa agatggggat tatcaaaagg caagtaaaaa aatagataaa attgtcaaaa
    34261 atcttaaaca aacaaaataa aaaactttat cacaattttt tgtgataaag acttattaat
    34321 tttttatatt aaaatacatt tatgaatatt aaaaatggag ttaaaaaagt ggctccggat
    34381 gtaggattcg aacctacgac caatcggtta acagccgact actctaccgc tgagctaatc
    34441 cggaatattt aaaagtaaaa tgtgattata gtgaaattaa aaaactttgt caagggtttt
    34501 tacacaaaaa tacatttttt atgtaaaaaa attaatttac tccttaacaa taacactttt
    34561 taaatttcta aaataaaaca aatttacccc atcttcatat aaataatcaa gcttcattcc
    34621 atgtgtttct aaaatagtat ttacaatata aagccctaat ccaaaacttg atttttgttt
    34681 tgatccttga gtaaaagctt gagtatagta ttctaaagta ttgttaagct caggaccacg
    34741 atttttaaaa caaatataat catctataat atcaatttgc acaaacccat cttcagaatg
    34801 tttaatacca ttatctatca tatttttaat cgccgtagta aaaagtttaa aatccacatt
    34861 tacaaaaaaa ctttcttcca taaaaatacg tatattgcta tcatctcgca ttgcaatttc
    34921 tttggcttca tctaaaacat ctaaaatatt gtattttttt ctatttataa aagcagcccc
    34981 tgaagtaatt tgctcaatag cagcaaattc attaattaaa atttcaagtc tagtaaaaac
    35041 cccatttaag cgctctttat atttattatc ttctatcatt tctaaagtta aaagcccctt
    35101 agtaatagga gttttgagtt catgcataat atttcttaaa aaaaactgac gagattggtt
    35161 tagctttcga atttgaacaa tggcttgata aaaagcttca cttacttgtg aaatttcatc
    35221 caccccagtg cttacatctt ctatatcgtt aagctttcct tgggcaaatt tatcaatttg
    35281 ttttttaagt cttttaagtg gttttaattt tttaaatata taaatataaa gcaatacaag
    35341 aatacaaatc acagctacag ctatagcttt gataataaaa tacctatagg tttgataatc
    35401 ttgatcctta taaagataaa cctttccatc ataaataata tttaaataca cctgtctatt
    35461 ataagaaata atctcgatta agccattatt aacctcaacc ctagctaaaa catcacctct
    35521 aaaaagaatt ttacggatct gctttgcttc tgttatctca tccattttat tataattttt
    35581 tgtctgctct tcaaattctt tttcgctgat aactcctgca aaatttaaga gccttgcatt
    35641 agctatcaaa gaatattttg tatttaattc tctagtataa ttttgctgat cgtattctat
    35701 aagccacaaa aagccaagta taacactaac cccagcaaaa ataaaaataa aagttatagt
    35761 ataaaaaatc gaagatttat tcattgagta agcttataac ctattccacg tatagagtga
    35821 atatattttg gagtttttgg atcatctccc atcttttgac gaattctact gataataacg
    35881 tctatacttt tattactaga atcctcacta atagaagaac aattataaac aagctcttca
    35941 cgacttacca ctccaccctc ttttttaatc aaatagctta aaatatcaaa ttcagcatta
    36001 gttaaagtaa gctcttgtcc tttcatggta ataatatgct tatattgatc ataaacaaga
    36061 tcttttacac tttttgctat ggcgcttttt gtatttgaaa tacgtcttaa atgactttta
    36121 atacgtgctt gtaattcttt tggattataa ggttttggta ggtaatcatc tgctccaagc
    36181 tctaaagcat taaccttatc tgtaatatca tgtcttgcac ttgaaataat aataggcgta
    36241 tcatactttt tacgaatctc ttcacacact tcaagcccat caagtcctgg caaagaaagg
    36301 tctaaaatga taagctgata ctcttttaat gcgagcttag aaaggcctat ataaggctca
    36361 tgagctatat caactttcat atcaaatttt tccaaatatt cagctgtaat ttctgctaat
    36421 tctaaatcgt cttctatcat aagaatattt gtcatagttt tcctttattt taaacttaat
    36481 tttaatttta aactaaaatt tataacgaaa ggaaaatcct tccgttattt ttatttaagc
    36541 acaagcaaag tcgcaaaacc attgcgatat acccaaactt tggtaaattc ttttttatta
    36601 acttgtttta aagcttgttc taaatctttt aaatttttaa tttcgctttg tccaacacct
    36661 atgataatat caccctcttg gaaaccagaa ttttttcctt tgctcttttc tttaacacta
    36721 tcaaccaaaa caccattaac atcttttgga atttgcaaac gatccttaag tcttggatct
    36781 aaatttctca aactcaaacc atcaatcaga tcactttgtg cgcctttagg attttctttt
    36841 tcacctttaa gaataaaact tgcttgctta ttttctccat ctctttcgta acttaatgaa
    36901 attttttgac caatctctaa agttcctata taatttttaa gatcaatagg actttttata
    36961 atcttatcat taactttagt aactaaatct ccacgcttaa gccctgcttc atcagcactt
    37021 gaaccttttt gaacatcagt aattaaagct ccttcttgat ttttgtaagc ttttttagta
    37081 tcaccttgca aagctgaaat agtcacacct aaaaatcctc tatcaatctt gcctttttca
    37141 ataagttttt tagctatatc tttaaccata tttgaaggta tagcaaaacc tatgccgtta
    37201 tttccaccgc cacgagaaag aatagctgaa ttaataccta ctaaatatcc acgactatcc
    37261 accaaagctc cacctgaatt tcctggattg atagaagcat ctgtttgtat aaaattttca
    37321 tattgattta aacctatatt gtctttgttt aaagcagata ttatcccact tgtaacacta
    37381 aaaccgactc caaaaggatt tccaagtgca aaaacaacat ctccttccat taaatcatca
    37441 gaatttgtaa aagtaatagc tgaaagatta ttagcctcta tttttataac agccaaatct
    37501 gtttttggat ctttacctat aagttttgct ttatattctg tatcgcttcc tggtaaattc
    37561 actgtaatcg tatcagcatc atctacaacg tgattatttg ttactatata accatctttt
    37621 gaaataatca cccctgatcc caaagaactc accacttctt tatcattttt tccttttctt
    37681 tgaggaaaat caaaatcaaa aaattgttta aaataaggat cattaaagaa atcatccaaa
    37741 ggacttggac gattcgctct tgtaatagtt tttgaggtgg aaatattaac cactgatttt
    37801 tttgcatctt taatagaatc atgataagaa agcactgcat ttccagcagc aggattcaca
    37861 cgattagccg ttgtggtcga ttcgttaaaa ttaatacttg cagcaaataa agcacttgct
    37921 aaacttaatg ataaaaaaat ctttttcatt tcatttcctt ttgttcttaa agataaatta
    37981 tctcgtaaaa tattttactg tcttcatagt ataaaaccga aaatttacaa aattgtaaat
    38041 aaaaccttga gtgataaaaa tttataaaac ttgattgact taggctaaag tttatgttat
    38101 aatttaatcc tttatataat caagtaaaaa tttttaagga aatataacat gaatagttta
    38161 tacgaaactc ttggagttag caaaaatgct agtgcagatg aaataaaaaa agcttaccgt
    38221 cgcctagcta gaaaatatca tcctgatatc aacaaagaaa aaggcgcaga agaaaaattt
    38281 aaagaaatta atgctgctta tgaaatttta agtgacgaaa aaaaacgagc tcagtatgac
    38341 caatacggcg attctatgtt tggtggacaa agttttcatg atttttcaag aaatgctggt
    38401 ggggtaaatt tagacgatat tttaaaagat ctctttggag gaggctttgg tggacgctca
    38461 agagggggtt ttaacggctt ttcttcaaaa ggctttagca gtggttttgg aggatttgga
    38521 ggttttgaag aagaaaattt agacagcaat ctagagcttc acattccttt cgaaaaagct
    38581 gttaaaggcg gggaacatag ttttaatttt caaggcgaaa ccattaaatt taaaattcca
    38641 cacggtataa aagaaggcga gaaactaaga attcgctcta aaggaaaaca aagcagaaat
    38701 ggagctagag gcgatttaat cattattgta aaaatagaag aaagtcctat ttacacaaga
    38761 gaagatgatg atttatatca aaaggttgat atttctttaa aaactgcact ttttggtgga
    38821 aaaataaata taaaaacact caaagaaggt aaggaagaag cgacaattaa cataacgcct
    38881 aattcaaaaa ataaccaaaa aattcgttta aaaggttatg gggtgcaaaa tagaaaaagt
    38941 gatatttatg gggatatgta tttgatttta aatgttgttt tgccaaattt agatactctt
    39001 gatgaaaaat ttatagaact cttaaaagaa aaattacctt aaagaaagga ataaaatatg
    39061 gaacaccatt atgatgaacc tgtatattta atcagtgttg tggctaaagt tttaagcata
    39121 catccacaaa ccttaaggca atacgaaaga gaaggattga tagagccaag tagaaccgat
    39181 ggcaaaataa gactttattc tcaaagggat attgatcata ttaaacttat attgcgttta
    39241 acaagagaca tgggaatcaa tcttgctgga gtagatgtta tcttaaaatt gaaaaaccaa
    39301 cttcacgaat ttgaaaattt aattgatgaa ctacgcttag aattaagcaa acaacaagat
    39361 aaagaagcgg ctagtaaagc cgttgtcaag cataaaaata gctttgattt gattttttat
    39421 gagaaaaaat aaaaaataat ggataatttt ttagaaattt ttttaatcac cgttgctata
    39481 gctatagttt taaatgtcat atttaaaaaa tttgaaattc caactatcat tggatatata
    39541 gctgctggag aaatcatttc tgaaatttat catttaagtg gcaaaggcga aatcacccat
    39601 atagccgaat ttggtatagt gtttttaatg tttaccatag ggcttgaatt ttcttttaag
    39661 catttaatgg caatgaaaca agaagttttt ttaaacggct ctttgcagat gcttacttgt
    39721 ggctttgttt ttatgctact tgctatagga attttaggac ttggagataa aagcgctacc
    39781 atagtaggct ttgcactagc actttcttca actgcagtgg tgcttaaaat tttaaatgat
    39841 aatggcgata taaatgagca atatggcaga aaagcattgg gaattttgct ttttcaggat
    39901 atagccgtta ttcctttgct tttgcttgta gatatttttt catccaacaa tcaaaacata
    39961 gaaaaactcc tttttaccac tttaatttca gcacttattt taatcacttt attatttttc
    40021 ataggtaaat atctagtgga tagaattttt agactcatta tccacacttc ttctcaggaa
    40081 atttttatca gtacagtttt atttatggtt attggagcaa gttttttagc aaattatttt
    40141 ggattttctt attctttggg tgcttttata gcaggtgctt tgatagcaga aacaaaatat
    40201 aaacacaaaa tagaagcgga cttgatccca tttagagatt tgcttttagg gctttttttc
    40261 ataactgtag gcatgcaaat tcaacttgat gtagtagcgc aaaattggtt tttaatcata
    40321 gttttaaccc ttcttgtaat ggctttaaaa tttggcatag tttttggctt tttatttctt
    40381 tacaccaaaa aaagagtagc gcttaaaaca gcttttgcca tagcgcaaat tggagaattc
    40441 gccctagcaa ttttttctct tttacaagca aaaaatatgc ttgatatcaa aacttcacaa
    40501 attttaattg ttgtttctat tttaaccatg attatcacac cttttatttt aaacaatata
    40561 agaaaaatta ccaatgttgt agaagatata gcacttaata ccaacgctgt gcaaaatatt
    40621 gacagcaata tcaagcttaa aaatcatctt gttgtttttg gctacggacg tttaggtcaa
    40681 gaagtcgtac aaaaaatcaa aaacacaggc gtaccttatc ttgttttaga aagtgattta
    40741 aatttagtag aacttggagt tagtcggggt gaaaatgtcg tttttgccaa tgctgctcaa
    40801 gaagaaacct taaaaattgc caatatagaa gaatgtgccg tagctattat cacagttaca
    40861 aatgaagcta aacttgaaat tttatgtcaa gtgctagcta attatccaaa acctatagat
    40921 actatcattc atgtaaatgg aactttgaaa aagatgcttt tttctagcat agatgaaaat
    40981 atacgcatca ttcgctctga aaaagtaatc gctagaaatt tagttcaaga agcactagaa
    41041 tgccgcattc ataaaaatac ctaaggaaga attttgacaa aaaatgaaga aaaagcctta
    41101 cgcgtaaaat acctaagaaa tcttgaaaaa tttttcaatg gcgctatatc tgcacttaaa
    41161 aaagaagatt ttgataaaac taaatttgaa gaaagaatgt taaaaaatgc taaatttttt
    41221 gaaaaaaatc ccgcggtaaa tcttaactca acttacgcaa aaaatcttga attttttgtc
    41281 aatgcttgtt tagatttttc caaagaaaaa agcgaacttt taaatcttgc caatgcttta
    41341 gataagcaaa aaaaacaagg tgaaaaaaaa gaaaaacata aaaattattt aaaggattat
    41401 gaatgattaa tgtatttttt gatatggatg gaactttaat cgatagcgca aatgccattt
    41461 cttgtacagt caatgaaata agacaggatt taaacctagc cccactttca agagaaatca
    41521 ttatgcaaac catcaatact cctaatattg actgggcaaa agaactttat aatatagaaa
    41581 atttccatca ttctagtttt aaagaaggct atgaaaaata ttttgtcaaa cactatgaac
    41641 aaagcgtggt gctttttgaa ggggtgaaag aacttttgga atttttaaaa agcaaaaatt
    41701 gttttttagc tattgctact aacgccccgc aaagctcact ttcaaacata cttaaaaaac
    41761 atcaaatcat tccttatttt gataaaattt taggcgtaaa cttgggcata gaacccaaac
    41821 ctcatcctat gatgctagag cttttaaaaa gtgaggctcc atataaaaca agcgttttta
    41881 taggggatag tcaaaaagat aaagaatgtg ctaaaaatgc taatttgcct tattttcatg
    41941 ccaaatggta tcaaaaagat ttaaaagaaa atgaatttag caacgctagt gaacttaaag
    42001 gttttttgga aaagtattta taagtttttt aatgaaattt tagttaaaat taga
//
LOCUS       DARBAC010000002        40684 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.002, whole genome shotgun sequence.
ACCESSION   DARBAC010000002 DARBAC010000000
VERSION     DARBAC010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 40684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40684
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.002"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            144..347
                     /locus_tag="SB799_000044"
     CDS             144..347
                     /locus_tag="SB799_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867326.1"
                     /translation="MLLNTPCRGIVDTNFESKRINITSTLKFQEKKEKVEAKAEKEEA
                     NKDNSDSTNTDTNKKDKLLDISA"
     gene            697..2787
                     /locus_tag="SB799_000045"
     CDS             697..2787
                     /locus_tag="SB799_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEG0867327.1"
                     /translation="MKIFKIIFLIISIFLSSSAFARVDDYINEANLIKDMLKQSIETY
                     KKGDNLGAKKLSEDAYFQHFENMEGPIGRNIGRKAITMERKFVNLRRMYKDEAPLTQI
                     NALIDSLYYDLDEVAPILQNGYRLKAEASDTNYDKAKAEKSSLEANAKREADAEALIA
                     QMMGVDKKDLAQSSLTTQASTPANNDTSKLTDDNASADLQAAAAMDARLQFILDNIST
                     KFSQAANAFKEKNYQASKDFLNDALFSDYRNTKVEILVNKFTKAGNDQKIQQAIRTLI
                     RQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSELSSLQISGFNDETKGKDYAKVSN
                     DIKLALDEILKNYDGFSASIVDDLQGIYLDIFEASGMENKIGAVDSGLKLKIESLFSK
                     GVALIKASADKKELEATFNDLEQLIASSVDKIQDSTPYSLFIWALGIILREGLEALII
                     VVAIVSYLVQSGNKNRLNIAYSALFTGVILSFVTAFGVSWLFKENAGQSRELIEGITM
                     LIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAISNNSAKTLWITVFLAVYREGAET
                     VLFYQALLFDAKTSTDFSAVFGGLGLGILILIVLYFLLKAGAIRIPVKQFFYITSYII
                     FYMVFVFTGKGIAELIEGKVIIPSLIPMNFEPILWLGIYPYYETLIPQFIVLIMLIIG
                     ILITKQISKKGVKS"
     gene            2784..3323
                     /locus_tag="SB799_000046"
     CDS             2784..3323
                     /locus_tag="SB799_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HEG0867328.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            3405..4808
                     /locus_tag="SB799_000047"
     CDS             3405..4808
                     /locus_tag="SB799_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HEG0867329.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPDKKYIFKSFLVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLVSFIFYFWKKIEILNFILLGILSFCTALHY
                     YFLSQDFPIFTSSLIDSEGISSLGFIALALLVCILIFFFLKWQKNFNQKTSFMLFLLL
                     ILIESDKALANILLTLMRNSIIETHTFLVSFVGKSNYFGVFGIYVYLIFITFLAFLSL
                     KIRKKNISKKQILDINYRKNEAKTSLINRYFSSVFISCVISFCIILYFFMVSSKPLTI
                     DEPKEILPNKNGKFIFDIALLRDNKLHRFAYISAEGKVIRFFLINKREDRDSPVAVFD
                     ACMICGDMGYIKKDGQLICISCNVRIFLPSVGKSGGCNPIPLKYEYDGKKITIDVKDV
                     IAGSNYFSQIKEIEVQDPVSKTKIINTQAPFSYSYKGITYYFSNQNNYEEFKKDPTKY
                     VEENEAQFLIQRRNDVG"
     gene            4795..6087
                     /locus_tag="SB799_000048"
     CDS             4795..6087
                     /locus_tag="SB799_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0867330.1"
                     /translation="MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKALIYGTYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKD
                     DSNEIMLGEDFAKNNKLKLGDTIELTGENNQSKEAKIVGILLHANPKMSNKIIAPLNL
                     AQDLLNKQGLYSSAEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQ
                     ISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALFGFIFGTALSQIISLSIFGYFIDIA
                     FIALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            6077..7195
                     /locus_tag="SB799_000049"
     CDS             6077..7195
                     /locus_tag="SB799_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEG0867331.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDTKLSKELKAYGANVMISPKQDENFISNAEYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKTGNELQIYNP
                     NNGKSIKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            7192..7845
                     /locus_tag="SB799_000050"
     CDS             7192..7845
                     /locus_tag="SB799_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867332.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            7842..8330
                     /locus_tag="SB799_000051"
     CDS             7842..8330
                     /locus_tag="SB799_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0867333.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            8291..8794
                     /gene="traF"
                     /locus_tag="SB799_000052"
     CDS             8291..8794
                     /gene="traF"
                     /locus_tag="SB799_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HEG0867334.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKA
                     WADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(8804..9241)
                     /locus_tag="SB799_000053"
     CDS             complement(8804..9241)
                     /locus_tag="SB799_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HEG0867335.1"
                     /translation="MKKTILTILFLLTLTQAKEIQVYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIVWLLENKPKDVIGI
                     SAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(9521..9964)
                     /locus_tag="SB799_000054"
     CDS             complement(9521..9964)
                     /locus_tag="SB799_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867336.1"
                     /translation="MKKLGLALAALVALNVSAFAGVITIHDSNLVKVSGGDDTYAKIA
                     LDNAKEGMKNQFNTDNLEIYAIESIKKDDPEHYNVIQRGSFKVMKQEIAKGKTVYYNE
                     FLVVDRKTNWAAEWDIECDHLDRPIKLSNNVNCRSGISTRRYNFK"
     gene            complement(10139..10223)
                     /locus_tag="SB799_000055"
     tRNA            complement(10139..10223)
                     /locus_tag="SB799_000055"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10187..10189),aa:Leu,seq:tag)
     gene            complement(10229..10305)
                     /locus_tag="SB799_000056"
     tRNA            complement(10229..10305)
                     /locus_tag="SB799_000056"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10269..10271),aa:Arg,seq:tct)
     gene            complement(10320..10396)
                     /locus_tag="SB799_000057"
     tRNA            complement(10320..10396)
                     /locus_tag="SB799_000057"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10360..10362),aa:Arg,seq:tcg)
     gene            complement(10401..10477)
                     /locus_tag="SB799_000058"
     tRNA            complement(10401..10477)
                     /locus_tag="SB799_000058"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10441..10443),aa:His,seq:gtg)
     gene            complement(10502..10579)
                     /locus_tag="SB799_000059"
     tRNA            complement(10502..10579)
                     /locus_tag="SB799_000059"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10542..10544),aa:Pro,seq:tgg)
     gene            complement(10622..11470)
                     /locus_tag="SB799_000060"
     CDS             complement(10622..11470)
                     /locus_tag="SB799_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEG0867337.1"
                     /translation="MRFIFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIIPQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNAMKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(11470..12132)
                     /gene="cgpA"
                     /locus_tag="SB799_000061"
     CDS             complement(11470..12132)
                     /gene="cgpA"
                     /locus_tag="SB799_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HEG0867338.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSNLISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(12122..12325)
                     /locus_tag="SB799_000062"
     CDS             complement(12122..12325)
                     /locus_tag="SB799_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867339.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(12391..13635)
                     /gene="eno"
                     /locus_tag="SB799_000063"
     CDS             complement(12391..13635)
                     /gene="eno"
                     /locus_tag="SB799_000063"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEG0867340.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDGRFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEDLIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIELESDEYLGEKL"
     gene            complement(13635..14666)
                     /gene="recA"
                     /locus_tag="SB799_000064"
     CDS             complement(13635..14666)
                     /gene="recA"
                     /locus_tag="SB799_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEG0867341.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            14772..15632
                     /locus_tag="SB799_000065"
     CDS             14772..15632
                     /locus_tag="SB799_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HEG0867342.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILEFDQSLCVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTYAVKIADANRKILAPMLME
                     RKLIRVNEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDYLI
                     PSEYEEARNS"
     gene            15644..15913
                     /gene="fliQ"
                     /locus_tag="SB799_000066"
     CDS             15644..15913
                     /gene="fliQ"
                     /locus_tag="SB799_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEG0867343.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            15910..16686
                     /locus_tag="SB799_000067"
     CDS             15910..16686
                     /locus_tag="SB799_000067"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEG0867344.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLISPK
                     PKNIGILGDGFDFIQILDQNKDFIHLRIGCKTKSSKMYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATFQGEILRENINFDYRFCPLNMPFFWAEFKLNFG
                     FDILKDEALKNARSNQPSGASFGSIFKNPKNDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIELARKKVFEEFGINLENEVIII"
     gene            complement(16710..17480)
                     /locus_tag="SB799_000068"
     CDS             complement(16710..17480)
                     /locus_tag="SB799_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867345.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDEDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLKLNWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFITTSKEGVANVNFKIISTSNGKILAAKNAELNL
                     TLKDQDAKQNYQDIVNQMPKMLASVIDNEIKKLKLTIN"
     gene            complement(17520..18284)
                     /locus_tag="SB799_000069"
     CDS             complement(17520..18284)
                     /locus_tag="SB799_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEG0867346.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPLTSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILYNPLNYKSSPFICVSSRNFLQDFL"
     gene            complement(18365..19633)
                     /locus_tag="SB799_000070"
     CDS             complement(18365..19633)
                     /locus_tag="SB799_000070"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEG0867347.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(19748..20923)
                     /locus_tag="SB799_000071"
     CDS             complement(19748..20923)
                     /locus_tag="SB799_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEG0867348.1"
                     /translation="MHQSVIDPQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAVIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEVAKKSFFYIFL
                     LYALSSLIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFGLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(20904..21740)
                     /locus_tag="SB799_000072"
     CDS             complement(20904..21740)
                     /locus_tag="SB799_000072"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HEG0867349.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMVAGGREVVLQERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(21742..23844)
                     /gene="topA"
                     /locus_tag="SB799_000073"
     CDS             complement(21742..23844)
                     /gene="topA"
                     /locus_tag="SB799_000073"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEG0867350.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKNAIENALKNPRKLDMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEAYAISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAIENARKFIQTNFGKDYLPSKANVY
                     TTKAKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMNPAISQTQ
                     NVFVKNDRALFKISGRKILFDGYYKVYGDMDKDKILPNLKIGENLKIQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
     gene            24039..25310
                     /locus_tag="SB799_000074"
     CDS             24039..25310
                     /locus_tag="SB799_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0867351.1"
                     /translation="MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGIL
                     IDKFGKLKFILPAMVVWTISGVSGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFYNHTKIEAKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFSLLFLVDSFFTVL
                     IALALLGMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQ
                     MGLVDAFLIWSIVIFIVCIVFLFLKQKPRIN"
     gene            25393..26505
                     /locus_tag="SB799_000075"
     CDS             25393..26505
                     /locus_tag="SB799_000075"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867352.1"
                     /translation="MLKINNLNKKFGNNEILKNINLEIKEGEFLTLVGESGSGKSTLL
                     RIIAGLEEPSQGEILNLNNQDISKQNPRDRNFAMVFQSYALYPHLSVRENLAMPIKAR
                     AKFIHKLPLASFYIKSYKEFKTHLEEKIEQVATKLKITHLLDKKPKQLSGGQCQRVAL
                     GRAIIREPNIFLMDEPLSNLDAKLRIHTRAELSAMHRELNKTFIYVTHDQSEAMTMSD
                     RIAFLVDGELLQVASPDEMYNNPNHLKVAQFIGTPTINTLCVELKSYGFALINKNLSK
                     HKSLAIRAENCFIDPHSQIKAKIYNIENMGNEYLIYTKLLKNDNNFILSLNTQEGKKL
                     QLDSVVGINFDYSKAFIFDEEGKRMDIKLYNLSFAA"
     gene            26502..27359
                     /locus_tag="SB799_000076"
     CDS             26502..27359
                     /locus_tag="SB799_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEG0867353.1"
                     /translation="MKNSLATFCFISPAVLLMLLFLILPIIWVIILSFSDYQLGNGDF
                     HFVGLINYKALLKDPVFFTSVKNTLIYALIVLPLSVLGGLALALLIESKNSAKSFYRA
                     VFFLPVMATLIAMSMVWEYILHPDIGIFNKILALFGVNTINWLSNKDTVLYTLAGIGV
                     WQQLGYNMILFTAGLMSIPTSVYEAAKLDGLNKTQILFKITLPLLLPILFFVLIISSI
                     KAFQVFDTVQVLTNGGPNHSSEVLLFTIYQEAFMFFRTNYASAISVIFLLFILILTLL
                     KIKFLDKKD"
     gene            27363..28176
                     /locus_tag="SB799_000077"
                     /pseudo
     CDS             27363..28176
                     /locus_tag="SB799_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866824.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
     gene            28240..28515
                     /locus_tag="SB799_000078"
     CDS             28240..28515
                     /locus_tag="SB799_000078"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867354.1"
                     /translation="MKKIFFTLALFGALNLAQAKTELVVSYAYPWFKDLHEKLKEDFE
                     KQNPDIEIRFLAPAQNYEEQSARLLREKMINKLPDVSFNSYSYYLHW"
     gene            28509..29438
                     /locus_tag="SB799_000079"
     CDS             28509..29438
                     /locus_tag="SB799_000079"
                     /inference="COORDINATES: protein motif:HMM:NF024808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEG0867355.1"
                     /translation="MVNKNIPKDLTQNLINKKELGFNDNAFKATTLENKIYAIPFASS
                     LPVVYYNMDLVKQAEWNKELPKTWDELFDLAQKINSLNGKSGVYFGETDTWLILALSL
                     ERGGKLINEKGKVDFNNKAWQETFKLLSDFHTLAKMPAIKRSEAISLFYAGNLGILIQ
                     TSAALTQTEKSINFPLKLSKFPGVQSGGELPVGGSVVMLTNDKNKEAALKYIHFVTGE
                     ANAYVPQYTGYMTSNLLANAKLKDFYNKNPNYTIAPSQIELMGNWPSFPGDNALKATN
                     TLWNYAEKLLMGTSTNYEEIAKQAQEEINALLP"
     gene            29450..30058
                     /locus_tag="SB799_000080"
     CDS             29450..30058
                     /locus_tag="SB799_000080"
                     /inference="COORDINATES: protein motif:HMM:NF024811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0867356.1"
                     /translation="MIFFDFDGVLVDSLKLWEQACQFSAKKLGFKGIFPQKPYAKLNP
                     VAHKEIGRILGFNPLEFEKIADEYFLEHIHTLVFFDKTKELLKDLSLDFKLSILSASN
                     ENLVRILLEKEQILKYFTNLHCTSSIPKAQTLKKFKQNHSIMIGDCISDIEAALEADV
                     YSIGVLWGWQDKIMLEKANILVNNHAQLKNAIRSFYEIHPFN"
     gene            30036..30830
                     /locus_tag="SB799_000081"
     CDS             30036..30830
                     /locus_tag="SB799_000081"
                     /inference="COORDINATES: protein motif:HMM:NF024258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEG0867357.1"
                     /translation="MKFIHLTDIHYGDKKEAIYSREPSAMMRLAIEDINKNHSDADFV
                     FITGDLTHKGSLESYTLLKQDLTKLNMPYYLILGNHDDRANALEIFNNLKQDENGFIQ
                     YEIQCNDNNVFLVLDTIKLKSHGGEYCQKRQIWLKNALERNQNKNIFICLHHAPFKTG
                     LRAMDFIGLDEKHSLELYKLFNSYKNIKHLFFGHYHSTLCGRWKDISFSSLKGINHQV
                     KFDLNSNEILLEFRNPEYAVVLLNNEVLNIHYNDFTFDKNLIFHEK"
     gene            complement(30873..32138)
                     /gene="secY"
                     /locus_tag="SB799_000082"
     CDS             complement(30873..32138)
                     /gene="secY"
                     /locus_tag="SB799_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEG0867358.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYVELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(32138..32530)
                     /locus_tag="SB799_000083"
     CDS             complement(32138..32530)
                     /locus_tag="SB799_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEG0867359.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFDSIKSVHKISKSV
                     NKIKLIGASAKDLVSKIKDENISVTGSK"
     gene            complement(32535..32978)
                     /gene="rpsE"
                     /locus_tag="SB799_000084"
     CDS             complement(32535..32978)
                     /gene="rpsE"
                     /locus_tag="SB799_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEG0867360.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            complement(32990..33346)
                     /locus_tag="SB799_000085"
     CDS             complement(32990..33346)
                     /locus_tag="SB799_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEG0867361.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            complement(33356..33892)
                     /gene="rplF"
                     /locus_tag="SB799_000086"
     CDS             complement(33356..33892)
                     /gene="rplF"
                     /locus_tag="SB799_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEG0867362.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            complement(33971..34366)
                     /gene="rpsH"
                     /locus_tag="SB799_000087"
     CDS             complement(33971..34366)
                     /gene="rpsH"
                     /locus_tag="SB799_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEG0867363.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            complement(34376..34561)
                     /locus_tag="SB799_000088"
     CDS             complement(34376..34561)
                     /locus_tag="SB799_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEG0867364.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            complement(34563..35108)
                     /gene="rplE"
                     /locus_tag="SB799_000089"
     CDS             complement(34563..35108)
                     /gene="rplE"
                     /locus_tag="SB799_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEG0867365.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            complement(35112..35345)
                     /locus_tag="SB799_000090"
     CDS             complement(35112..35345)
                     /locus_tag="SB799_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEG0867366.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            complement(35345..35713)
                     /gene="rplN"
                     /locus_tag="SB799_000091"
     CDS             complement(35345..35713)
                     /gene="rplN"
                     /locus_tag="SB799_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEG0867367.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            complement(35713..35964)
                     /gene="rpsQ"
                     /locus_tag="SB799_000092"
     CDS             complement(35713..35964)
                     /gene="rpsQ"
                     /locus_tag="SB799_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEG0867368.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            complement(35974..36159)
                     /gene="rpmC"
                     /locus_tag="SB799_000093"
     CDS             complement(35974..36159)
                     /gene="rpmC"
                     /locus_tag="SB799_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEG0867369.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            complement(36146..36571)
                     /gene="rplP"
                     /locus_tag="SB799_000094"
     CDS             complement(36146..36571)
                     /gene="rplP"
                     /locus_tag="SB799_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEG0867370.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            complement(36574..37275)
                     /gene="rpsC"
                     /locus_tag="SB799_000095"
     CDS             complement(36574..37275)
                     /gene="rpsC"
                     /locus_tag="SB799_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEG0867371.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKVGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            complement(37275..37718)
                     /gene="rplV"
                     /locus_tag="SB799_000096"
     CDS             complement(37275..37718)
                     /gene="rplV"
                     /locus_tag="SB799_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEG0867372.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKAEEKKTVAKKAPAAKKTTTTKAPAKKTTSTKKATAKKES"
     gene            complement(37729..38010)
                     /gene="rpsS"
                     /locus_tag="SB799_000097"
     CDS             complement(37729..38010)
                     /gene="rpsS"
                     /locus_tag="SB799_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEG0867373.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            complement(38012..38842)
                     /gene="rplB"
                     /locus_tag="SB799_000098"
     CDS             complement(38012..38842)
                     /gene="rplB"
                     /locus_tag="SB799_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEG0867374.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            complement(38844..39125)
                     /locus_tag="SB799_000099"
     CDS             complement(38844..39125)
                     /locus_tag="SB799_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEG0867375.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLENTEA"
     gene            complement(39128..39742)
                     /gene="rplD"
                     /locus_tag="SB799_000100"
     CDS             complement(39128..39742)
                     /gene="rplD"
                     /locus_tag="SB799_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEG0867376.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGALFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVSEVNAYLVSVFNAVIIEKSALESITKEG"
     gene            complement(39739..40314)
                     /locus_tag="SB799_000101"
     CDS             complement(39739..40314)
                     /locus_tag="SB799_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEG0867377.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            complement(40324..40635)
                     /gene="rpsJ"
                     /locus_tag="SB799_000102"
     CDS             complement(40324..40635)
                     /gene="rpsJ"
                     /locus_tag="SB799_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEG0867378.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
BASE COUNT        13241 a         7091 c         5957 g        14395 t
ORIGIN      
        1 ataaatggtt gatactttta gaagcaaatt aaatagataa aattttactt caataaattt
       61 aaattttatc ttatttatac gatttataat ataatcaaaa attacaactt aaaaagctat
      121 tgcaattata taggagtttg ctaatgttac ttaatacacc ttgtagggga atagtagata
      181 caaattttga aagtaaaaga attaatataa cttcaacttt aaaatttcaa gaaaaaaaag
      241 aaaaagtaga agctaaagct gagaaagaag aagcaaataa agacaatagc gattctacaa
      301 acacagatac caacaaaaaa gataaacttt tggatatatc tgcttaatct aaaatatgct
      361 ataatcatct ccttgaagaa tacacaataa atgatttttt gatttttatt aagcttttaa
      421 aacactaaaa aatgaaaaat taaaaataca aaaacaatat cccaaagtgc atagcttaga
      481 agaaaacctt gcgatactta aaaacaaccc atattaaatc acaaaaataa aatatattta
      541 aaaatttatt aaaatatatc ttaaatataa ttaataaaaa atattatcga tacaaaagct
      601 tattttttag ttctatttaa gatttttaat attatactag ccattattta ttttgataat
      661 aaatattatt tttatcaaaa accaaggata atgataatga aaatttttaa aattatattt
      721 ttaattataa gtattttttt atcaagctca gcttttgcta gagtagatga ttatattaat
      781 gaagcaaatc ttatcaaaga catgctaaaa caaagcatag aaacttacaa aaagggtgat
      841 aatctaggtg ctaaaaagct tagcgaagat gcgtattttc aacattttga aaatatggaa
      901 ggccctatag gaagaaacat aggaagaaaa gccatcacca tggagcgtaa atttgtaaat
      961 ttgcgtcgta tgtataaaga tgaagctcct ttgacacaaa ttaatgcttt aattgatagt
     1021 ctttattatg atcttgatga agtagcccct attttacaaa atggatatcg tttaaaagca
     1081 gaagcaagcg atacaaacta tgataaggct aaagctgaaa aatcaagcct agaagccaat
     1141 gccaaacgcg aagctgatgc agaagcttta atcgcacaaa tgatgggcgt ggataaaaaa
     1201 gatttagcac aaagttcttt aaccacccaa gcttctacac ctgcaaacaa cgacacaagc
     1261 aaacttacag atgataatgc aagcgctgat ttacaagctg ccgctgcaat ggacgcaaga
     1321 ttgcaattta tactagataa catctctacc aaattttcac aggcagctaa tgcttttaaa
     1381 gaaaaaaact accaagctag taaagatttt ttaaatgatg ccttatttag tgattatcgc
     1441 aataccaaag tagaaatttt agtaaataaa tttaccaaag caggaaacga tcaaaaaatt
     1501 caacaagcca tacgcaccct tatacgccaa atcaacgatg caaaaataga tgaaaaaggc
     1561 ttaagagatg gcttagataa catagaagaa caaatttttg atgttttctt acaaattcca
     1621 aattcagaac tttcaagttt gcaaatttca ggctttaatg atgaaacaaa aggcaaagat
     1681 tatgccaaag tttctaatga tatcaaactt gctttagatg aaattttaaa aaattatgat
     1741 ggctttagtg cttctatagt agatgattta caaggaattt atctagatat ttttgaagca
     1801 agcggtatgg aaaataaaat cggtgctgta gatagtggct taaaacttaa aatagaaagt
     1861 ttattttcca aaggtgtggc actgattaaa gcaagtgcag ataaaaaaga gcttgaagct
     1921 acttttaatg acttagaaca actcatagca agcagtgtgg ataaaattca agattctact
     1981 ccttattcgc tgtttatatg ggctttaggt attattttgc gtgaaggctt ggaagctttg
     2041 attatcgttg tagccattgt ttcttatctt gtgcaaagtg gtaataaaaa tcgtctaaat
     2101 atcgcctata gtgctctttt tacaggagtg attttaagtt ttgttaccgc ttttggagtt
     2161 tcttggctat ttaaagaaaa tgcaggacaa agtagagagc ttatagaggg tattaccatg
     2221 cttatagccg tattactact cttttatgtg ggcttttggt tactttcaaa cgcacaaaat
     2281 aaaaaatgga caagctttat caaacaaggt gctatagatg ctatatcaaa caatagtgca
     2341 aaaacccttt ggattaccgt atttttagct gtttatagag aaggtgcaga aactgtgctt
     2401 ttttatcaag ccttgctttt tgatgctaaa acaagcactg attttagtgc tgtttttggt
     2461 gggcttggac ttggaatttt aatacttatt gttttatatt ttcttttaaa agcaggagcc
     2521 attcgcatac ctgtaaaaca atttttctat atcacttctt acattatttt ttacatggtt
     2581 tttgttttta caggcaaagg catagctgaa ctcatagaag gaaaagtcat tattcctagt
     2641 cttataccta tgaattttga accgatttta tggcttggaa tttatcctta ctatgaaacc
     2701 ttaatccctc aatttatagt tttgatcatg ctaattattg gcattttaat aacaaaacaa
     2761 atttcaaaaa aaggagtaaa atcatgataa aaaaagtttt atcagtagtt gctgcagctg
     2821 cggttattag tacaaattta tttgcaggcg aagtgccaat cggcgatcca aaagaactta
     2881 atggcatgga aatagccgct gtttatttac aacctattga aatggaacca agaggtattg
     2941 atctagctgc gtctttagca gatattcacc tagaagctga cattcacgca cttaaaaaca
     3001 atccaaatgg ttttccagaa ggtttttgga tgccttattt aaccatagcc tatgaactta
     3061 aaaataccga cacaggtgcg attaaacgcg gaactttgat gcctatggtg gctgatgatg
     3121 gtcctcacta tggcgcaaat atcgctatgg aaaaagataa aaaaggtggc tttggcgtag
     3181 gaaattatga acttactttt tatatctcaa atccagaaaa acaaggtttt ggacgccatg
     3241 ttgatgaaga aacaggcgtg ggtaagtggt ttgaaccttt taaagtagat tataaattca
     3301 aatacacagg cacgccaaaa tgattttaca ctcggatttt ccgagtgttt aaatattttt
     3361 atttttattg aaaaattaaa ataacaatgt ttaaagagta aattatgagt atatattttg
     3421 tgcattttct tatcagtgtt ttaccgctaa gtattttaat ggcctttatc actcctgata
     3481 aaaaatatat ttttaaaagt tttttagtag tttttttggg ctttttattt ggatattttg
     3541 ctttttttat cgcagcacaa tttttaaaaa ccgaaaattt aatctttaat tttgattttg
     3601 tttttatagg tttattgcta gtaagcttta tattttattt ttggaaaaaa attgaaattt
     3661 taaattttat tttattggga attttaagtt tttgcaccgc tttgcattat tattttttaa
     3721 gtcaagattt ccctattttt actagttctt taatcgatag cgaaggtata agttctttag
     3781 gttttattgc tttagccttg cttgtttgta ttttgatttt cttcttttta aaatggcaaa
     3841 aaaattttaa tcaaaaaaca agctttatgc tgtttttact gcttatcctt atagaaagcg
     3901 ataaagctct agccaatatc ttgcttactt taatgcgaaa ttccatcata gaaactcata
     3961 cttttttggt gagttttgta ggaaaaagta attattttgg tgtttttgga atttatgttt
     4021 atttaatttt catcactttt ttagcattct taagcctaaa aattcgcaaa aaaaatataa
     4081 gcaaaaaaca aattttagat ataaattatc gcaaaaacga agctaaaaca agtcttatta
     4141 atcgctattt ttccagtgtt tttatctcct gtgttataag tttttgtatt attttatact
     4201 tttttatggt aagctctaag cctttaacca tagatgagcc taaagaaatt ttacccaata
     4261 agaatggcaa atttatcttt gatatagctc ttttaaggga caacaaactc caccgctttg
     4321 cttatatcag tgctgaaggt aaagtgataa ggttttttct tatcaataaa agagaagata
     4381 gggattctcc tgtagctgtt tttgatgctt gtatgatttg tggagatatg ggctatatca
     4441 aaaaagatgg acaactcatt tgcatttctt gcaatgtgcg tattttcttg cctagtgtag
     4501 gcaaaagcgg gggttgcaat cctatcccac tcaaatacga atacgatggt aaaaaaatca
     4561 ccatagatgt taaagatgta atagcaggat ctaattattt tagtcaaatc aaagaaattg
     4621 aagtgcaaga tcctgtatca aaaacaaaaa ttataaacac ccaagctcct ttttcttata
     4681 gctataaagg gattacttat tatttttcaa atcaaaacaa ctatgaagaa tttaaaaaag
     4741 atcctacaaa atatgtagaa gaaaacgaag cccaattttt aatccaaagg agaaatgatg
     4801 ttggctaaaa tgatttttaa ctctatattt aaaaacaaaa ttcaaaaatt tttagccttt
     4861 cttacttgtt ttttagccac gcttttgctc tctactatgc taaatattac cctaagtata
     4921 ggcgatgaag taactaaaca actcaaaagc tatggctcta atatccttgt tttacccaaa
     4981 ggctcaagtc ttagtataga aataggtaat gaactttatg aacccttaaa aaacaaaaac
     5041 tacctagaag aaaaaaattt atatatgatt aaagacattt attggcgtaa caacatcacc
     5101 gcacttgctc cttttttaga aggtaaaatc acaattgaaa actcccagca aaaagcactt
     5161 atttatggca cttattttca aaaagccata aaaattaaag atgatgatga ttttatcaca
     5221 ggtataaaaa gtctttatcc ttatttagca gtgcaaggag aatgggcaaa agatgatagc
     5281 aatgaaatca tgctaggcga agactttgct aaaaacaata aactaaaatt aggagatact
     5341 atcgaactca caggagaaaa caatcaaagc aaagaagcaa aaatcgtagg cattttactt
     5401 catgccaatc ctaaaatgtc aaataaaatc atcgctcctt taaatttagc tcaagattta
     5461 ctcaacaaac aagggcttta ctcaagtgca gaagtaagag cttttaccat acctgaatca
     5521 gccctttctg aaaaagtgcg tcgcatgggc gaagaaaaat tagatcagtt agaatatgac
     5581 aaatggtatt gctcagctta tgtaggctca atcgctagtc aaattagcga tggcttacca
     5641 ggtgctgatg caaaagctct aaatgctata agcgatgctc aaagcttggt ggttaaaaag
     5701 atccaatcct taatgggcat tacttgtatt atttgtctta ttgttgcaag tattgcgatt
     5761 tcaagtctga tgagttctga aattcatcgt agaaaaaaag aaataggact tttaaaagtg
     5821 cttggtgcta atacttttca aatttatctc atctttgcta gtgaaaattt aatcgtagct
     5881 ttatttgctg ctttatttgg ctttattttt ggcacagcac tttctcaaat catcagtctt
     5941 agtatttttg gatattttat tgatatagcc tttatagctt tacctttaag ctttattttt
     6001 gcaggactta ttgccttact aggttgcttg cttcctatca aaaatatcac acaactttca
     6061 gctgcaggag tgctttatgg tagataagtt tttccttaat gagcttttta aaagcattag
     6121 cttttcttat caaagacttt ttataatagt tttaagtgtt tttataggag cacttacttg
     6181 ctcagctttt ttaaatattt attttgatat tgacaccaaa ctttctaaag aattaaaagc
     6241 ttatggagca aatgtaatga taagtcctaa gcaggatgaa aattttatct ccaatgctga
     6301 gtatgaaaaa ataaaagaaa atttaaaggc tagggcttta actccttttt tgtatgattt
     6361 tttaaattta ggcagtacaa gcggagtggt tttaggcact gattttaggg ctttaaaaat
     6421 caccaaacct tttttagaag ttaaagaagg aagcttttcc ctaaatgatt ttgatgaaaa
     6481 ttcagccttt ttaggggtta atttagccaa gcaactgggc ctaaaaacag gcaatgaact
     6541 tcaaatttac aatccaaaca atggaaaaag cataaaactt accataaaag gcatactttc
     6601 aagcaatgat gaatttgata gcattgtttt agctccttta agcgtggtgc aaaatttaag
     6661 cgatagagcc ggtattaact atgctaatgc tgtagtttat ggaaattttg atgaagttaa
     6721 agccaaaaca caagcaatta gcaatgaatt catcgatgca aaacctatat cttcagtatc
     6781 cttaagtgaa ggtttagtgc ttggaaaaat caaagcttta atgtttttaa tcatacttgt
     6841 agtattgatc atagtcacta ctagcgttaa tacgacctta agctctatta tattttctcg
     6901 caaaaaagaa atcgcactgc gtttagcctt gggtgcgaaa aaaagtgaaa tttttaaact
     6961 ttttgctagt gaatgcttta tagtaagttt ttttgctagt ttaatcggag ctttttgtgg
     7021 gatattttta gccaatgtct ttggttattt gatttttaat tctagtattg attttagatt
     7081 tatagctgtt tttatagcct taatcatttc tttgattttt gcctttttgg ctgcattttt
     7141 tcctataaaa agagcattaa aaatcaatgt gtgtgaaaat ttgaaaggtg aataatgaaa
     7201 aaagaactta ttaaaataaa caacttaaat aaagaatttg gcaaagttaa agccttaaac
     7261 aatatcaact taagcgtcta tgaaggagaa tggcttgcca tcatgggtcc atcaggaagt
     7321 ggaaaatcaa cgcttttaaa catactatca ctcatggaca ctccaagctc tggggagtat
     7381 atcttagaca atgaaaacct agagcaaatg gatgaggagc aaaaaatcac cttacgtcgt
     7441 gaaaaaatag ggcttgtctt tcaacaattt catcttatcc cctatcttaa cgccttagaa
     7501 aatgttatgc tctctcagta ttatcactca agcgtagatg aagaagatgc taaaatggtt
     7561 cttgaaaaag taggactttc gcacagactc actcatttac ctagccaatt aagtggtgga
     7621 gaacaacaaa gagtttgcat agcaagagct ttgatcaaca acccagagct tttactcgca
     7681 gatgaaccca cagggaattt agatgaagcc aatgaacaaa tcgttcttca aaccttgcaa
     7741 aaattaaaaa atgaaggcaa aaccatagtt ttaatcacac acaatcctga tttagccaaa
     7801 ttcgcagatc gaacccttat cttacaacat ggggtgttaa aatgaaaaaa agccttttaa
     7861 tcttaagcat tttgttcttg ctcaatgctt gttcttttga aaattcaaaa gatactggaa
     7921 aagttggaga aaaaagcgct gaaatttcag ctaaagatac cttaggaaaa gctgtaaaac
     7981 ttgctgatga taatacaagt ttaaaagttt tggtcttttt tcaaaatggc tgcccttctt
     8041 gcttaaaaga actcccttct ttagatgaat tcatacaaaa tcaccccaat aaaatcagtg
     8101 tttatgctat aaattccatc gataatgcca atgtggttaa ggttttagcc gaacaatttg
     8161 actttaaaaa tgtaaaagtt ttaaaagacg atcttaaaat caccaatgat cgttatgctg
     8221 tgtttgcaac ccctactacc atcatcatta aagatgggat gataaaagat agaattttag
     8281 gagaaaaacc atgggaattt ttcgaatcca agcttatttc tttgctttaa ttatagcttt
     8341 attttttgta gcttgtgata gtggagaaaa ttttaaagct ttaaatagtg ataaaaccta
     8401 taattttgcc tacaatggtt ttgaaaaaag cctaaaacta aatgataaag cacaaaattt
     8461 tgccttagta tttttcacaa aagattgtgg agtttgtaaa gaacaaattc ctattttgca
     8521 gaatttggct aaaaattatg attttaatat ctttgtggtt ttaggcgatg caaatgatgc
     8581 aaatgatgca aaagcttggg ctgatgaaaa aggtttatct aatttagcaa tgttttatga
     8641 aaaaagagca gctaaatacc tttcaagtgc cattggggaa atatatggag tgcctgtgct
     8701 tagttttttc aaagaaggaa aaatggatga aaaattcata ggcttaactc cttatagcat
     8761 acttgaaaaa gaaatcaaaa aagtaaaaag ctaaaaattt actttaaagc tttttatctc
     8821 ctataaaata tccataaagc tcatagcttc catctttttt catcaaaatt acaggatatt
     8881 tttcactata accttgttcc attcctgggc ttccttgcgg catgccagga gctgaaattc
     8941 ctataacatc tttaggcttg ttttcaagca accatactat ggcactttca ggaacatgcc
     9001 cttcaatagc atagccttcg atcacacctg tatggcaact ttgatactca tcttttatac
     9061 ccattttttc tttgatttta agaaaatcat tggttttatg aacgctaacc tcataaccct
     9121 tagctttcat ataatcagcc caaagatcac aacagccaca agtaggactt tcataaactt
     9181 gtatttcctt agcctgcgta agagtgagta aaaaaagaat agttaaaatt gtttttttca
     9241 taatcgctat cctaagtaaa aaatatataa taatactttt ataaagttaa tatcatcaca
     9301 tttttaacac taaaaatgaa tttacaaaaa tttaatcaag aaaagatttt taatgagtgc
     9361 tgattttgtc tttacagcaa agatataaaa gataaaacga tttaaaaaac tagaaatttt
     9421 taacttaaaa agcttaaaat ttagatatat tttatactat gttttttata gtcaaaacct
     9481 ttatggtgtg aaagctctat tattttagag ctttcaagta ttatttgaaa ttatagcgcc
     9541 tcgtagagat accagaacga caattaacat tattgcttaa ttttataggt ctatcaagat
     9601 gatcacattc aatatcccat tcagcagccc aatttgtttt tctatctaca actaagaatt
     9661 cattataata aacagtcttt ccttttgcta tttcttgttt cattacttta aaactgcccc
     9721 tttgaataac attatagtgt tctggatcat ctttcttgat actttctata gcgtaaatct
     9781 ctaagttatc agtgttaaat tgatttttca ttccttcttt agcgttatct aaagctattt
     9841 ttgcataggt atcatctcct cctgatactt taactaaatt agaatcatgt atagtgataa
     9901 cccctgcaaa tgctgacaca tttaaagcaa ctaaagctgc caaagctaaa cctaattttt
     9961 tcattttatc tccttgaatt gaattttgta tattttaatt atttttcaaa tcttttgcaa
    10021 gataattttt aaatttatct aaattaaatt tgcattttat ctaacaatca taagaaattt
    10081 taaaatgaaa taaaaattta tgagaaatca actcttgttt gaaaatgata aaagtaagtg
    10141 gtgcggatga aaggacttga accttcacgc attgctgcac cagatcctaa gtctggcgtg
    10201 tctgccaatt tcaccacatc cgctaaagtg gtacgcccaa gaggattcga acctctgacc
    10261 tacggcttag aaggccgttg ctctatccag ctgagctatg aacgcatata aaatcttggt
    10321 ggtgcgcccg ataggaatcg aacccataac ctacagatcc gaagtctgtc gctctatcca
    10381 gttgagctac gagcgcttag tggggtgagt gatgggaatt gaacccacga ccctcaggac
    10441 cacaatctga tgctctaacc gactgagcta cactcaccat tttgtataaa tttataaaaa
    10501 atggtcgggg tgaaaggatt cgaaccttcg gccccttggt cccaaaccaa gtgcgctaac
    10561 cagactgcgc tacaccccga ataaataaaa ggaaatattt tatcacaaaa taattttaaa
    10621 gtcaaggatt ttcatctctt attcttaaaa aaaccggaaa gcgaggtaag gaatttttgg
    10681 tcaatccatt aaatttataa gtcacaatac taccaatttt tggaggattt tttctatctt
    10741 catcttttaa accactgcct attttaatga tttgtccatt aggcatttta caaagtaagg
    10801 cacctacttg attttcaaat ttacccttac ccttgcgaaa tcctaccaac tcacattctg
    10861 catcatcata gggttttaat ttcatagcat ttttacttct gcctttttca taaggactta
    10921 aatttttgcg tataacaata ccttcacctt gattttttat aatgctttcg taaaattgat
    10981 ttaaattatt ttgattttca actggaattt gaggaataat ttttatatag gcactaggat
    11041 atttttgtaa atactcttct aaaacagcca aacgattttt aagagtgcaa gtagaaattt
    11101 gaaattcttc gcaagcattt ggcacatcaa aaatattata agttacttcc ttccataagg
    11161 tcaaattgct atcgccacta cgaattaaag ctgaaatttc atcaaattta tttcttgcta
    11221 tccaaagctc accatcaata gcaaaaggag ggaaattttt tgtaaaaaag tcaggagttt
    11281 ttattttgta attttggcga gtttttagat atttcccatc ccaaattcca cgcaccccat
    11341 caagtttttc gctcatcaaa taagcattaa aatctttaga attaaaatct tgcttatcga
    11401 atttgctaag aagtaaaatt tcattagcaa aaactaaaca agcacaacat attaaaaaaa
    11461 taaatctcat caaagcagat taatcatata tccagttgca tctttttgaa tattataatt
    11521 ataagttcca tcaagatata ttacaagtcg ataatatcct ttatgagatc caaagtctat
    11581 gcgtttaaaa atagaattac taaggcgtat gttttttgta gggctaatca aattagatct
    11641 aaaatctata acgattttac ttggatttcc tactgaaaaa tctgtgatca tttcatcact
    11701 agtgttaagt tttattttgt ttttataaac cgcgtaagaa ataaaatcat aaatctttgc
    11761 aacctgtaaa ggtatttcaa cattggctgt tgagtttgat tcttgtttag agctattttt
    11821 ttcaggtata gtaactgaaa catcaagtac ttttgaagga tcagggcttt taaatcttga
    11881 tatagtataa gtatcgtgcc aatcaatact tttattaaca tctaaatcga tcttatcttc
    11941 acttccgtct aaattgatat aattaaaagt gatgcttttt aaaattcttg cactagaatt
    12001 aaatttaact tcctcttttt gaaattcagg tggagcaacc aaggttatat tttgatctgt
    12061 cttgaaagga ttttcatcag catataaaag agaggtaaaa ataaaaaata ttgccaaaat
    12121 tctagttttc atttgggtat aatcctttta attcaaaata atctttttgt gctttagcat
    12181 tttgttcttt gagcaaaata atctttttat taagctcttc tttggtattt tctaagctta
    12241 ataaagtatc taaagaatac tgcccaaaaa acatattgcc aaaataaatc gctccaatta
    12301 caacaagaaa agcccaaaaa atcattttta taacatgggt ataaaaactt ttttttcttg
    12361 tgctttcgtc gtattcttta agtaaatcgc tcagagcttt tctcctaagt attcatcgct
    12421 ttcaagttca atttcaagca agcgattgta ttttgcggtt ctttcacctc ttgctagggc
    12481 tcctgttttg atttgtcctg tatttaaagc cacagcaaaa tccgctataa aagcatcttc
    12541 actttcgccg cttctatgac tcatcacaca tttatagtta tttctttgcg ctaaacgcac
    12601 agttctcata gtttgggtaa tagttccgat ttgatttggt ttaataagca cagcatttgc
    12661 catttttttg atgatacctt ctcttaaaat atcttcattg gttacaaaca aatcatcgcc
    12721 tacaagctga attttattgc ccaatttttc agtaagcttg atccaacctt caaagtcatt
    12781 ttcagctaag ccatcttcga tactgcaaat tggatatttt gcacaaagtt ctacatagcg
    12841 ttcgatcaaa tcctcgcttg aaaaagcctt gccttccatg tgatatttgc catctttgaa
    12901 aaattctgta cttgccacat caagagcgat ttttacacga ttttcataac ctgctttttt
    12961 gatacaagtc attaaaaggt cgataggttc tgtgttgtta gctaaatttg gagcaaaacc
    13021 accttcatca cctaaagctg tagaatgtcc agaatttgcg agttcttttt ttaatatcgc
    13081 ataaatttca caaactgaac gcaaagcctc tttaaagcta gtaaaaccaa aaggcataat
    13141 cataaattct tgaaaatcta cattgttgtt tgcatgagca ccgccattta tgatattaca
    13201 cattggcacg ggtaaaatgc tcgcatttgc accacctaag taacgataca aaggcattcc
    13261 caaagcagcc gcagccgcac gagctgttgc catggatacg cctaaagtcg catttgcacc
    13321 taaatttgag taattatttg ttccatcaag ctcacgcaaa gtatcatcaa gttgagtttg
    13381 attaaaagca tctagtccta aaatttcatc tgcaatggtc tcattgacat ttgcaacagc
    13441 ttttaaaacg ccttttccgc caaatcttcc atcattatca cgcaattcta aagcttcttt
    13501 tgaacctgta cttgcaccac ttggaactat ggccgcacct acacttccat cgcttagcgt
    13561 aacttcggct tttacggttg gatttcctct actatcaaga acttcatagg ctctaacatc
    13621 ttcaattact aacattattc ttctccttcg tcatcttcgc taccgctgat cataccttct
    13681 attcccatag aattttgaat tgcttttgtg atttcatctg caatttcagg gttttctttt
    13741 aagaaagctt ttgagttttc tctaccttgt ccaagttttt tatctttata agaaaaccac
    13801 gcaccacttt tatctacgat atcaagtttt acaccataat cgatcaattc accttcacga
    13861 cttaaaccct ctccaaacat cacatcaaat tcagcttgtc tgaatggagg agcaacttta
    13921 tttttaacta cttttacttt aacgcggttt cctataggtt cttcgttttg ttttaaggtt
    13981 gctacttttc taacatctaa acgcacagaa gcataaaatt ttaatgcatt tccacctgtt
    14041 gtggtttcag gagtaccata acccatagca ccgattttca tacgaatttg gttgatgaaa
    14101 attactgtgg tattcatttt atgaactata cctgtaagtt ttcttagagc ttgagacata
    14161 agtcttgctt gaagtcctac atgttgatcg cccatatcgc cttcaatttc tgcttttggg
    14221 gtaagtgctg caacgctatc tactacaata agatctactg caccacttct tgctatagtt
    14281 tctacaattt ctaaggcttg ctctccaaaa tcaggttgag aaacatacaa atcatctgta
    14341 tttacaccta aatttttagc atattttaca tcaagagcgt gctctgcatc aataaaagca
    14401 caaactccac ctgctttttg gcattctgcg ataatgtgta gagttagagt ggttttacct
    14461 gaactttcag gcccataaat ttctataatt cttccttttg gaacaccgcc tatacctaaa
    14521 gcaagatcaa gtccaactga acctgtgcct atgctatcga tttgctcgac ttctttatcc
    14581 cctagtctta agatagtgcc ttttccaaag gttttatcta aactttttag ggcagcgtct
    14641 agagattttc ttttattatc atccataact ttccttaaaa attctaaatt tttagttaga
    14701 attctaacaa aataaaatta aataatgatt tattttgcta gaattaaagc aaagatttaa
    14761 aggaagcata gatgaaaaaa attactattg cacattctcc tgatgctgat gatattttta
    14821 tgtatatggc tattaaattt gggtggatag ggaatgattt tgcttatgaa aatacagctt
    14881 tagatataca aactttaaat gaatttgcct tgaaaaatga atttgatgct acggctattt
    14941 cttttgggct ttatccttta atcgcttctg agtatgcgct tttacgcaca gcagtgagtt
    15001 ttggtgaagg ttatgggcca aaactcatca agaaaaaaga cacgcattta aaaagaaatt
    15061 ttaaagtcgc tttgagtgga gcaaatacca ccaatgcttt gatttttcgt atgaaatacc
    15121 ctgaagcaag aattatttat aagaattttt tagacattga aaatgcagtt ttaagtggcg
    15181 aagtagatgc aggagtttta atccatgaaa gcattttaga atttgatcaa agtctttgcg
    15241 tggaagcaga actttgggat atatggcttg aatttgctaa agaaaatttg cctttgcctt
    15301 taggtggaat ggctttgcgt cgctctttgc ctttaagcga tgcgattaag attgaaagag
    15361 atttaaccta tgctgtaaaa attgccgatg caaatcgtaa aattttagcc cccatgctta
    15421 tggaaagaaa acttatccgt gttaatgaag aaaaacttga tacttatctt aatttatatg
    15481 ccaataaaaa ctctattagc atgaatcaaa ctcaactttt agctgtagat acgcttttta
    15541 aactaggata tgattataaa ttttatgata aaatcataca tgtaaatgat tatcttatcc
    15601 ctagcgaata cgaagaagct agaaattctt aaaaaggata aaaatggacg aaagtacctt
    15661 agttgctctt ggagtgcaaa cctttaaaat cacacttttg ctttccttgc ctatgctttt
    15721 agcagggctt attgcagggc ttgtaatcag tatttttcaa gcaactacac agattaacga
    15781 aatgacactt tcttttgttc ctaaaatcat cttggttgtg gttattttaa tctttttaat
    15841 gccttggatg actacaacta tgattgattt tactgagaat atactaaatc aaattccaac
    15901 ttttatcaaa tgatcattga ttttaaaaaa tactcttctg tacgtatagg aaatgaattt
    15961 gaagttttag ttttggatca aatttgtgat tttgatggtt ttttaatagg tggtgcaaac
    16021 aaccttttaa ttagcccaaa acctaaaaat ataggaatat taggagatgg ttttgatttt
    16081 atacaaattt tagatcaaaa taaagatttt atacatcttc gcataggctg caaaacaaaa
    16141 tcaagcaaaa tgtatcgctt tgccaaagaa aataatctta agggttttga gtatttaagc
    16201 aaaattcctg gcacacttgg tgggcttttg aaaatgaatg caggacttaa aggagagtgt
    16261 atcagtcaaa atttaattaa aattgccact tttcaaggcg aaattctaag agaaaatata
    16321 aattttgatt atcgtttttg tcctttaaat atgccttttt tttgggctga atttaaatta
    16381 aatttcggtt ttgatatcct taaagatgaa gctttaaaaa atgcaagaag caaccaacct
    16441 agtggagcaa gctttggctc tatctttaaa aatccaaaaa acgactttgc aggacgttta
    16501 atcgaagctg taggacttaa aggatttagc aagggagatg ctatgttaag cgataaacac
    16561 gcaaattttt taatcaataa aaaaaatgca agttttgaag atgcgttttt tcttatcgaa
    16621 ttggctagaa aaaaagtctt tgaagaattt ggcataaact tagaaaatga agtgattatt
    16681 atctaaaaat ttttcaatat atctttaaat taattgatag ttaattttaa tttttttatt
    16741 tcattatcta taacactagc taacattttt ggcatttgat ttacaatatc ttgataattt
    16801 tgttttgcat cttgatcttt taatgtcaaa tttaattctg cattttttgc tgcaagaatt
    16861 tttccattgc ttgtagaaat aattttaaaa ttaacattag ccacaccctc tttactagtt
    16921 gtgataaaat aatttgtaat atttacataa aaatcttgca aatttaccac cacaacataa
    16981 tctgtaaatt tggcatacat tttagcctta tctttttctt gtgttaaaaa aggacttaca
    17041 tttataagtt ttgcatcttt agggctaaaa tatgacaaag ttttaggact ttgataaata
    17101 ccatttgcag cagaattaac ccaattaagc tttaagcttt gaatcaaatt tttagcaaat
    17161 aatgtagaaa attccttatc actcacccta aaaccatcta aaaaataacc aaaatttttc
    17221 ctagaagtta atacaatagc aaaatcaata tcctcatctt tggtgatttg cgattttttt
    17281 tcaattaaag tagaactatc aaacaatgct ttttgttgat ttaaatttgg atttgcaaca
    17341 ttttgattta gatctattac ttcaaagcta tctgcgcttt tttcaatttt aataaccttt
    17401 ttctgagaaa aattattcgc taaaagatta gaacttaaaa ctaaacttaa aaacaaaatg
    17461 aaacaatacc tcatcttcat ccttataaac tatttaaata taaaattata ctctttattt
    17521 tataaaaaat cttgtaaaaa attcctagat gaaacacaaa taaaaggact ggatttataa
    17581 tttaaagggt tatataaaat gtatttttta gaaaaatccc ccataaatcc tccattttga
    17641 ttaatcaaaa aatctcctgc tacaatatcc caaatattaa gcttttcaaa tcttttataa
    17701 actcctgccc tagcctctaa aatagcacaa aatttcaatc cagagcctat attaatagct
    17761 tctaattgat gctcttttgc aaagtcttca tcttctttac taagatgatt aacactcaat
    17821 aaggctttat atttattttt ctcgtattct tgctggtcaa tttgcaaagg tttatcgttt
    17881 ttataaacct tggtttttgc atgagcatag aatatatcac cttttgatgg attttgtata
    17941 agcgataaaa cagggcgatt gtcatgaact aaacttatca taacgcaaaa ttcatcgctg
    18001 ccttttaaaa aaccacttgt tccatcaaga ggatcgataa gccaaaaagt ttttaattct
    18061 tcacactctt ctttgctgag taatttttct tctgataaaa ttttaatatc cgtagaacct
    18121 aaaatatcat ttagaatttt attagaagca agatctgctg atgtaagcgg gcttttatct
    18181 tctttttccc aagttttgaa attttttctc tcttctaaaa tagctttaga agcttgattg
    18241 ctagcattta tagcaatttc taaaaattta tcaagattaa gcatgattat aagactttct
    18301 ataagatttt ttaaaattat acaagaagat tttgtggaat ttttaatttc cacaaaaatt
    18361 ttaattaaat tttactagtt tcacccaaat aaagttgtct tggacggact attttaagac
    18421 tttcttgctc tttttgttct atccactgag ctatccatcc tggggtgcgt cctataacaa
    18481 ataaagtagc aaacatttca tttggaatac ctaaggcttt taaaataagt ccactatgaa
    18541 aatcaacatt cggatatagc cctctttgaa caaaataatc atcgcttaaa gcaatctctt
    18601 ctatacgcgt tgctacttta ataagattgg tatcaatacc caactcatca ataagttgat
    18661 cacgaagttt tttaagtact tttgctctag gatcaaaatt tttataaacc ctatgcccaa
    18721 agcccatcaa gcggaaagga tcgtttttat ctttagctct tttgatgaat tcatctactc
    18781 tatcaacact acctatttgc tcaagcattc taataacacc ttcattagct ccaccatgtg
    18841 catgacccca aagcgcacca atacctgctg ctatacaggc ataaggatga gcatgagttg
    18901 aacccacagc acgaaccgtt gaagttgaag cattttgctc atgatctgca tgaagcataa
    18961 aaactgtatc aagtgctttt acttctatag gtttaagctc tacatgatcg taaggataag
    19021 ttcttaacat atataagaaa ttttctgtaa aaccacgatc taaatttgga taagccatag
    19081 gaaagccgtg tttatatcta taagcggtgg cgactatagt agggatttta gctactattc
    19141 tagctgccat ttccatatat tcttctttta cattcatgtt taaatgatca ggataaaaag
    19201 cactaagcga tgaaacagca ccttgtaaaa ctgccatagg atgagcatta tcagggaaag
    19261 aatcaaaaag acgatgcata ccttcatgga taaaagaacg ttttttcatt tcataacgaa
    19321 atgcttcaag acgcgtagca tcaggtaatt ctttataaag caaaagatga accacatcta
    19381 aataaagttt gttttcagca agccactcta taggatagcc acggtgcatt aaaattccgt
    19441 tttctccatc aatataagtg atttttgatt tacaagtagc tgtagaagtc aagccctcat
    19501 cataagaaaa cattcctgtt tgtttataaa aacttgacat atctacaacg cttgggccag
    19561 ttgtaccatc atatatagga aattcatagc tttttccatt tctattatcg gttatagtaa
    19621 cggaatttga cattttcgct ccttttattg ttacttttat taattctaac aaaaaaggac
    19681 gattatgagt ttttttatta ttaaattttt aagattttgt ttgctttttt gagtaaaaaa
    19741 gtaactttca ttttttagaa ttagaaagaa atttaatcat actcataaca ataatagcct
    19801 caaataacgc tgttaaaata agcgctgaat aaagcttctc atcaataacc ttgcccgaat
    19861 aacccagagt agctgttgct ataagcaagg ttaaaggcat agaatgacta agaccaaata
    19921 aaatcatatt tttaaaacca attcttttta aaaaaacact tgcacataaa attcttaaac
    19981 ccaccataac aaacataagt aaaaatgctt gtaaaacgat tttataatct aaaatcattt
    20041 taagatcaaa ggttgaacct atatggataa aaaaaatagg gatcaaaaac ccatgtccaa
    20101 aagtagaaag cttatgctca agatcttttt tatgatcaaa aaaagtagct ataaatgagc
    20161 ctgctataaa agaaccaaga acgatttcaa gttttgtaat aaccatagca acaatgatca
    20221 gtataaaaat cgccatacaa aatcttatat ctttttcatt tttatcttcc catggcataa
    20281 gcacaacttt aagctgagga taccaccaaa aaagcacacc aagcatttta aatccgagca
    20341 aacaaagtcc caaaaagata ttaagatata aaatactttg cgctacatca ataatacctg
    20401 ttccttcgcg caaaaaagct cccgctatag tcaaaagcac aatagaaatc acctcagcta
    20461 aagtagctac tatcatagca atatttagcc aataacactc ttttccaaaa tccttaaaaa
    20521 gcaaagataa aagccctaca ctcatcacag gtataatgat aacaaatact aaagaaagtc
    20581 caaaaatcca tactataaga gaagataaag cgtaaagtaa aaaaatataa aaaaaacttt
    20641 ttttggcgac ttctttatcc atattaaaaa aggctcttaa atttacttcc atacccgcta
    20701 taaacattag ataataaaaa cctacattgg ctaaaagtgc aaaattttca ctttttccta
    20761 taaaaccaaa atatgcaatt accgcaccta aaataatttc agtagctgaa agaggcaagc
    20821 gtaaaatttt tgcaatatgc ggagaaaaaa gtaagcataa agctataaca ataagaattt
    20881 ttagatcaat taaaccttgc ggatcaatga cactctgatg caaaagtaaa tcccatttct
    20941 tttaatttta ttatatcttg acttggttct tcacctttag tggttaaata atcccctata
    21001 acaatagccc cagcacctgc ttgaaaaatt tcatactgcc tttcttgcaa taccacttca
    21061 cgcccacctg ctaccattac cacgctttga ggcaaagcct ctttggtgtc acgcacgatt
    21121 tttaaagctt catcagcact aagccttgga acttgtagtt ttaaattttc attggctata
    21181 aaaaaattaa taggtgttga aaaaggctgt aattcttgca aagattttct aaaacttagt
    21241 ctatcttctt cactctcacc cataccataa attccaccac aacaaagcat aagtcctgct
    21301 tctttagcgt ttaaattggt ttgaaatcta ctttcccaag tatgagtggt gcaaatttgt
    21361 ggaaaaaatt ccttagaagt ttcaagattg tgattataag aaaaaattcc tgctttttta
    21421 agttctttga gttgttccac gcttgccata ccattacagg caattaaaag caaattaggc
    21481 acttcttttt gcacagcctt agcagcctca caaacatact caagcttttc atcatcaagc
    21541 ccaagtcctg ctgtaaccaa acaaaaaccc aaggcttcat ttttctttgc cattttcgct
    21601 tctaaaacga tttgtgaaag ttctttgcga cgatattttt gaatatctgt ttttacatgg
    21661 gcactttggg tacagtattt acagtcttct gaacaatttc cactcgctat atttgaaata
    21721 gcacaaagca tgatttgcat tctaatcctt catttctttt ttgattttgc actttaagca
    21781 ttctaggaat gtaccttttt taagctcttt tatcactaaa gtttcgccac actcttcgca
    21841 tttttcttca cttggtttgt atttgcttat aaaattgcat tttggataag cactacagcc
    21901 ataaaattta ccgcgttttg aaaagcgttc tacgatttca cctttttgac aacttggaca
    21961 agtaatacct gtaccattag ctttagcttt tgcggcagta ttttcgcttt catttttact
    22021 ttcacttttt aaatttcttg aatacttaca ttttgggaaa tttaaacacg ctacaaattc
    22081 tccaaaacgc ccttttctaa tagcaagctc cccgccacaa tcaggacaac tttcacctag
    22141 ttttgtgaca gttttttgac tagcaatttt tgtttttcct tcttcgattt ttctcataaa
    22201 aggatagtaa aattctttta aagtttcttg ccaatctgcc ttatcttcag cgatttcatc
    22261 taaagtattt tcaaggtttg aagtaaattt actatctact atatcgctaa aatttttttc
    22321 aagcacttcg gttacattaa aagcaacatc actaggaatg agttgttttt tgtctatttt
    22381 tacataatca cggcttgtaa gtatagaaat tgttggtgca taagtagaag ggcgacctat
    22441 gcctaaactt tcaagttttt ttacaagtcc tgcttctgaa taccttgaag gtggttcggt
    22501 aaaatgtgag ttcatttcta aattttgtat ttttaaattt tcacctattt taagatttgg
    22561 taaaatttta tccttatcca tatcaccata aactttataa tatccatcaa aaaggatttt
    22621 tctaccgctt attttaaaaa gtgctctatc attttttaca aatacatttt gagtttgaga
    22681 gatagcagga ttcatctgac aagctaaaaa gcgattgtaa ataagtgtgt aaagttttaa
    22741 ctcatctttg tctaaaaatt tggccgcaat ttctggagta aaacttaaat ttgtagggcg
    22801 tatagcttca tgggcttctt gagcaccttt agcctttgta gtatatacat ttgctttgct
    22861 tggaagatag tctttgccaa aatttgtttg tatgaatttt cttgcatttt ctatagcttc
    22921 tttggctaaa tttaaactat cggttctcat gtaggtaata acccccatca cgccttcatg
    22981 ggtatttact ccctcataga gtttttgagc tatcatcatg gtttttttag ggttaaaacc
    23041 aaggcgattg ctagcacttt gttgcaaggt tgaagtcata aaaggaggtg gtggagcgat
    23101 ttttctttct ttgctttcaa tgtcgcttat agcataagct tcatttttac aagcctctag
    23161 tataagctta gcacgatctt tgttggtaat ggtaagtttt tctatcttag ctttgtcaaa
    23221 ctcaaccagt tctgcatcta aatctttttg aaaaatcata tctatactaa agtattctag
    23281 tggcacaaaa gcacgaattt ctttttcacg atcgactatg atctttaaag ctgcactttg
    23341 aacacgccct gcgctaagcc ctctttgaat tttttgtcct aataaggggc tgagtttata
    23401 tcctacaatg cgatctaaaa ggcgtctagt ttgctgagca tttacagagt gcatatctaa
    23461 ttttcttgga ttttttaaag cattttctat agcgttttta gtgatttcat gaaaaacaat
    23521 gcgtggtaag gtgttttcat cttttcctat agcttttgca atatgatagg ctatagcctc
    23581 tccttctcta tcctcatccg ttgcaagata aacttctttg gcatctttgg ctttgctttt
    23641 aagttcttta actaaggcgc tatgatcact tgtgattcta tactcaggga taaattcatc
    23701 atcttctatt ttaatcccaa agcttgattt aggcaaatct ctaatatgtc ctttagaagc
    23761 gataacttca taatcttttc ccaaaaaatt tcctatggtt ttagcttttg caggagattc
    23821 tactatgatt aaatttttct tcattttgca cccttgttaa ataaaaagct gaatttagct
    23881 aaaaatattt aaaattctac ttataaaata tattttaatc aagctaaaat attttaaaaa
    23941 caaaactatc ataacaaaat aaataaaata taattttaag taattttaaa tacaaaccat
    24001 aatttttaga gtataataaa gcaaaaaagg caaaaattat gaatggcaaa acttataaat
    24061 ttcatccaaa tgacacgaaa atggataaaa aaataattca aattactgaa aagtccggat
    24121 ttaaagcggc tgtgttttct atggccgcta tgactatgct aggaagcgtg gtcatttcat
    24181 ctgctctgcc tgctatcaac agacattttg aagaactttt aacccaaagt ggcgctactc
    24241 ttgcttcaag tttcacatta gcccatcttg atatacttgt tcgcttagtt ttaaccatcc
    24301 ctgctatttt tgttgtcatt ttatctccat ttgctggtat tttaatagat aaatttggca
    24361 aattaaaatt cattcttcca gctatggtgg tttggactat ttctggagta agtggctttt
    24421 tcttaaatga tatttatgct atactgactt caagagctat ttttggtatg gcaactgctt
    24481 ttataatgac aggtgcttcg gctttacttg gagattatta tagtcgtggt ggctttaatc
    24541 gcagagaaaa tgctttaagt cttcaaggat ttttttgtgc ggtagggggt gctgttttta
    24601 tttctattgc aggatttgtt tcgagttatt cttggcgtta tcctttttta gtatatggac
    24661 ttggaatttt aattacctta atggctatca tttatctttt tgaacctaga aaatttaaat
    24721 tctataatca tacaaaaata gaagcaaaaa caaattattg gcaatttttc cctatctatt
    24781 ttataggttt ttttatcatg gtagtttatt atatttcgcc aactcaactt ccttactata
    24841 tagaagaaca tttaggattg gatcctaaat atataggtat ttcgatgtct gtatctgcac
    24901 tatgttatgg ttttttctct ctaagctata gatatattat aaaattctta agtattaaaa
    24961 ctatctatgt tttaactctt tttatcgtat cttgttcttt ttcgctgctt tttttagtag
    25021 atagcttttt cacagtttta atcgccttag ctttgcttgg aatgggcgga ggtattatgc
    25081 ttgtaaataa tacggcttat cttttttcaa tctgtcctga aaatgctcgc gctagggctt
    25141 atggaatttt agcaagttgt atatttttag gacaattttt aagtcctatt atctctcaac
    25201 ccatcgttag acaaatgggt cttgtagatg cttttttaat atggtcaata gtaattttta
    25261 tagtgtgcat tgtgttttta tttttaaagc aaaaacctag gataaattaa tcttcaagca
    25321 ttgcatctgt ttccaaaaag tttccaatat ttgatttaat tttaaaaatt ttccaaaata
    25381 tggagcttgg atatgttaaa aattaacaat ttaaataaga aatttgggaa caatgaaatt
    25441 ttaaaaaaca tcaatcttga aattaaagag ggtgaatttt taaccttagt tggagaaagc
    25501 ggaagtggca aatcaactct tctgagaatt atagccggcc ttgaagagcc aagccaaggt
    25561 gaaattttaa accttaacaa tcaagatata agcaaacaaa atccaagaga tagaaatttt
    25621 gctatggttt ttcaaagcta tgccttatat cctcacttaa gcgtgagaga aaatcttgct
    25681 atgcctatta aagcaagagc taaatttatc cataaacttc ctctggcttc tttttatatt
    25741 aagtcctata aagagtttaa aactcatttg gaagaaaaaa ttgaacaagt agcaacaaaa
    25801 cttaaaatta cacacctttt agataaaaaa cccaaacaac tttctggagg acaatgtcaa
    25861 agagtcgctc taggtagggc tattataaga gaacctaata tatttttaat ggatgaacct
    25921 ttatcaaatt tggatgctaa attacgcatt cacacaagag ctgaattaag tgctatgcat
    25981 agagaattaa ataaaacctt tatatatgtc acgcacgatc aaagcgaagc tatgactatg
    26041 agcgacagaa tagctttttt ggttgatggt gagcttttgc aagttgcaag ccctgatgaa
    26101 atgtataata accccaacca tttaaaagtt gctcaattta taggaacacc tacaatcaat
    26161 accttatgcg ttgaattaaa aagctatggt tttgctttaa tcaataaaaa cttatctaaa
    26221 cataaaagtc tagccataag agcagaaaat tgttttatag atccacattc acaaattaag
    26281 gccaaaattt ataatattga aaatatggga aatgaatatt taatttatac caaactctta
    26341 aaaaatgata ataattttat tttaagttta aatacacaag aaggtaaaaa gcttcaacta
    26401 gactctgttg taggaattaa ctttgattat tcaaaagcct ttatctttga tgaagaaggt
    26461 aaaagaatgg atattaaact ttataatttg agttttgcag catgaaaaat tcacttgcga
    26521 ctttttgttt tatttctcct gctgttttat taatgctttt atttttgatt ttacctatta
    26581 tatgggtaat tattttaagt tttagtgact atcagcttgg aaacggcgat tttcattttg
    26641 taggattgat taattataaa gccttgctaa aagatcctgt ttttttcact tcagtaaaaa
    26701 atactttaat ttacgccctt attgttctac ctttaagcgt tttgggaggt ttggctttag
    26761 ccttgcttat agaatctaaa aatagtgcaa aatcatttta tagagctgtc ttttttctac
    26821 ctgttatggc aaccttgata gccatgagca tggtttggga atatatttta catccggata
    26881 taggaatttt taataaaatt cttgctttat ttggggttaa tacaatcaat tggctttcaa
    26941 ataaagacac agttttatat actcttgctg ggattggagt atggcaacaa ctgggctata
    27001 atatgatctt atttacagct ggattaatga gcatacctac ttcggtatat gaagcagcaa
    27061 aactcgatgg attaaacaaa actcaaattt tatttaaaat caccctaccc ttgcttttac
    27121 ctattttatt ttttgtttta attataagtt ctataaaagc ttttcaagtt tttgataccg
    27181 ttcaggttct aacaaatgga gggccaaatc attctagcga ggttttatta tttaccattt
    27241 atcaagaagc ttttatgttt tttagaacaa attatgcctc agctatttct gtaatatttt
    27301 tattatttat tttgatttta actcttctta aaattaaatt tttggataaa aaggattgat
    27361 ttatgtttag aattttgcgc catcttattt tgggtatatt gtcattattt tttatttttc
    27421 cttttgtatg gatggttata actagtttta aacctgaaaa tgaaattttt tccaatgctt
    27481 ttcatttttt ttccacaaaa ttttacccta attgaaaact acacaaaagc ttttaaggaa
    27541 aatgacttgt tgcacttcct ttttaatgga ttttttgtat gttttgccat tctattaata
    27601 caaattataa tcgcttatcc ttgtgcttat gctctatcca aatacaaatt taaaggacaa
    27661 aagtttttgc ttgttattat agtgtgctct ttgcttattc caactcaagc tatttgcgtt
    27721 ccttggtata ttttaatgta ttattttgga gttttagatt catatctagc tcttattttg
    27781 ccttttagca tttcagtctt tgggattttt ttaattaggc aatttatcaa ttgtattccc
    27841 aatgatataa tttatgcagc aagaatggat ggtttaaatg aatttagtat actttgcaaa
    27901 attatattac cactaaccac ccctgctttg atttcttttg gaattttttc catagttgct
    27961 cattggaatg attatttttg gcctttaatt gctgtaagtt ccccacaata tttcactcca
    28021 acccttggag taatttcttt taaaaacaat gaagcaggta cggattatgg aaccttaatg
    28081 gccgcctcaa caatagtagt agcccctctt ataataggtt ttttacttgc acaaaaaaga
    28141 tttatacaag gtattgccaa tacaggcata aaatagcttg ttaaaactta ttagaattac
    28201 attattctaa taagttttaa caattttaaa ggatttaaaa tgaaaaaaat atttttcacc
    28261 ttagctcttt ttggagcttt aaatttagcc caagcaaaaa cagaacttgt tgtttcttac
    28321 gcttatcctt ggtttaaaga tttgcacgaa aaacttaaag aagattttga aaaacaaaat
    28381 ccagacatag aaataagatt tttagcaccc gcacaaaact atgaagaaca aagtgctaga
    28441 cttttaagag aaaaaatgat caacaaactc cctgatgtaa gctttaacag ctatagctat
    28501 tacctacatt ggtaaataaa aatattccta aagatttaac acaaaatctt atcaataaaa
    28561 aagaattagg ctttaatgat aatgctttta aagcaaccac tttagaaaac aaaatatatg
    28621 ctattccttt tgcaagctct ttacctgttg tatattataa tatggattta gtcaaacaag
    28681 cagaatggaa taaagaactt cctaaaacat gggatgaact ttttgattta gctcaaaaaa
    28741 tcaactcatt aaatggaaaa agcggggtgt attttggaga aacagatact tggcttatat
    28801 tggctttaag tcttgaaaga ggcggaaaac tcattaatga aaaaggcaag gtagatttta
    28861 acaataaagc atggcaagaa acttttaaac ttttaagtga ttttcacact ttagcaaaaa
    28921 tgccagctat aaaacgctct gaagctataa gcttatttta tgcgggaaat ttaggcatac
    28981 ttatacaaac ctcagcagct ctaactcaaa cagaaaaaag cattaacttt cctctaaaac
    29041 tttctaaatt tccaggtgtt caatcaggag gagaattacc cgtaggtgga tccgtagtta
    29101 tgctaactaa tgataaaaat aaagaggcag ctttaaaata tattcatttt gtaacagggg
    29161 aagccaacgc ttatgtacct caatatacag gttatatgac tagcaattta ttagccaatg
    29221 caaaattaaa agatttttat aataaaaatc caaattatac cattgctcct tctcaaatag
    29281 aactcatggg aaattggcct tcatttccag gagataatgc tctaaaagct acaaatactt
    29341 tatggaatta tgctgaaaaa cttcttatgg gaacaagtac aaattatgaa gagattgcaa
    29401 aacaagccca agaagaaatc aatgctttat taccttaaaa gggtataaga tgatattttt
    29461 tgattttgat ggtgttttgg ttgatagttt aaaactttgg gagcaagctt gtcaatttag
    29521 tgcaaagaaa ttgggtttta aaggaatatt tcctcaaaaa ccttatgcaa aattaaatcc
    29581 tgttgctcac aaagaaattg ggagaattct aggttttaat cctttagaat ttgaaaaaat
    29641 agcggatgag tattttttag aacacatcca tactttagtc ttttttgata aaacaaaaga
    29701 attattaaag gatttgagtt tagattttaa actttccata ttaagcgcta gtaatgaaaa
    29761 tttagttcga attctccttg aaaaagaaca aattttgaaa tattttacca atcttcattg
    29821 tacaagctca ataccaaaag cacagacgct caaaaaattt aaacaaaatc actctatcat
    29881 gataggtgat tgtattagcg atatagaagc tgcactagaa gctgatgttt attctatagg
    29941 agtgctatgg ggttggcaag ataaaatcat gctcgaaaaa gctaatatct tagtcaataa
    30001 tcatgctcaa ttaaaaaatg ctataaggag tttttatgaa attcatccat ttaactgata
    30061 tacactatgg tgataaaaaa gaagccattt actcaagaga accatcagct atgatgcgtt
    30121 tagctataga agatatcaat aaaaatcata gcgatgctga ttttgtattt ataacaggag
    30181 atttaactca caaggggagt ttagaatctt acactctttt aaaacaagat ttaaccaaac
    30241 ttaacatgcc ttattatttg atcttaggca atcatgatga cagagctaat gcattagaga
    30301 tttttaataa tttaaagcaa gatgaaaatg gttttataca atatgaaata caatgtaatg
    30361 acaataatgt ttttttagta ctagacacta taaaacttaa aagtcacgga ggtgagtatt
    30421 gtcaaaaacg ccaaatttgg ctaaaaaatg ccttagagag aaaccaaaac aaaaatatat
    30481 ttatttgctt acatcatgct ccttttaaaa ctggccttag agctatggat tttataggac
    30541 ttgatgaaaa acactcttta gaactttata agctatttaa ctcatataaa aatataaaac
    30601 acttattttt tgggcattat catagcactc tttgtggaag atggaaagat atttcctttt
    30661 cttctcttaa aggcatcaac catcaggtta aatttgattt aaatagcaat gaaatattat
    30721 tagaatttag aaatccagaa tatgctgtcg ttttactcaa taatgaagtt ttaaatattc
    30781 attacaatga ttttactttt gataaaaatt taatttttca tgaaaaataa attatccaag
    30841 caggaaattt ttcctgcttg gataatttta aattacaaac ctaccgcact taaagtttgg
    30901 tatttactca tataaatttg agcttcaatt tttctcatcg tatcaagtgc tacttgaact
    30961 acaataagta cagaagtacc gccaaaatga aaaggtacac ccataaattt caccaaaacc
    31021 caaggtaagg ttgcaacaag ccctaaataa atagaacctg ataaagttaa acgagaagct
    31081 acttcgttaa gataacttga agttccttca cctggacgaa ttccagggat aaaaccacct
    31141 tgttttttca aattttctgc tatatcttta gcattaaata cgatagaagc ataaaaataa
    31201 gcaaagaaaa ttacaaacaa gaaagttaaa acatgaaaca aataaccatt tggatttaaa
    31261 aagtcattaa tggcttgtag ataaggattt gtactagttt gtaaaatcgt tgttggaaac
    31321 atcaaaatcg cactagcaaa aatcggtgga ataaccccac taagattgag tttaatagga
    31381 atataattca taatgcgttt gttttgattt tgcattacaa ctttacgaga ataagaaata
    31441 ggaattcttc tttctccaag ttctacataa ataatcacgc ctatggtgat taaaatcaaa
    31501 gcaaaaattg caaaagcggt taagaaattc atctcgcctg aattgatttg ccctacagtt
    31561 cctgaaatcg ctcttggaat acctgaaaca atacctgcaa aaatgattaa agaaatacca
    31621 tttcctatac ctctttgtgt gatttgttcg ccaagccaca ttaaaagcat agttcctgca
    31681 agcatagaaa tagcacaaag tgcgataaac atatttaaat cttccaccat tatagcccct
    31741 gcaccaccac gaccgtgcaa gctttgcaaa cctatagcaa cgcctatact ttgaaccaaa
    31801 gtaatcacaa tagtcgcata acggataatt tgcatatatt tttgcatact atcacgctct
    31861 tttttcatct taccaatatt tggaaaagtt gctgcaagaa gctccataat aatagaagca
    31921 gtaatataag gcataatacc taaagaaata atagaaaagc gttcagccgc tccaccacta
    31981 aaaacattaa ataaacccaa agcattgttt tgattgttgt taaaaaattc cgcaatcaca
    32041 tcagcattga cgccaggaac tggcacataa gccagaaccc tataagcaaa caaaaatgct
    32101 aaggtgatta aaatcttatt cgtcaatgct ctattcatta ttttgatccg gtgacgctaa
    32161 tattctcgtc tttgattttt gatactaagt cttttgcact tgcaccaatt aatttgattt
    32221 tattcacaga ttttgaaatt ttgtgaacac ttttaatgct atcaaatgta atttcactaa
    32281 gctcttttac agctgtgatt ttttcaacat tgatcacata aggtttttga attttagaag
    32341 taaaacctac ttttggtagt cttctttgaa gtggttgttg acccccttca aaacctcttt
    32401 tttcattata accttttcta gcagtttgac ctttaccccc tttagtagca gtcttaccca
    32461 tgccagaacc ttgaccacgg ccaattcttt tagttttatg cgttgaaccc gctgcttttg
    32521 ttaaattcat cttcttatcc ttttaacatt gttaaagctt tgattgtagc acgaaccaca
    32581 ttagctgaat tatttgaacc caaagacttg gttaagatgt ctttaatacc tgcaagttcc
    32641 acgatagggc gtgtagaacc acctgcgata actcctgtac cttcactagc tggtttaagt
    32701 aaaattctac ttgcgttata ttttacctct acatcgtgag cgatagttga gcctttagtt
    32761 ttaacttcaa cgatattttt aaacgcatcg tcaacagctt tacggatagc atctggaact
    32821 tccttagcct taccataacc aacacctact aaacctttgc ggtttccaac gataactaaa
    32881 gcagtaaatc taaatcttct accaccttta acaaccttag taactctgcc gatatcgacg
    32941 attacttctt caaattcttc tctattatat ttttccatcg atttacccct tatagcctaa
    33001 tgccattttc tcttaaagat tcagccaatg ctgcgataac accatgatat acataaccat
    33061 ttctatcaaa aacagcttgt tctatctttt tagcttttaa agttttagca aattcagcag
    33121 cgattttttt agcaccttct ttatttgctt taacgccaag tttgcgtcca tcaactgctg
    33181 ctaaagttac agcttttaca tcatcaatcg cttggatata tagagttctg ttcgatttaa
    33241 atacagaaat tcttggaaaa ttttcacaac ctgaaatttt cgctctaatt cttttttttc
    33301 ttttgattct taaagttagt tttcttttta atacatttgc tctcatattc tacccttact
    33361 tcttagatgt cttaccagct ttgcggataa tgcgttcatc agaatactta acgccttttc
    33421 ctttatatgg ctctggcggt ctaaattcac gaatttgagc agcaacttga cctacaactt
    33481 gtttatcact tcctttaact gcaatagtat ttttatccac tacaatttca attccttctg
    33541 gaatatcata attaatagga tgagaaaaac caaggcttag ttctaaaact ttacctttta
    33601 aagctgcttt ataaccaact ccattgattt caagagtttt tgaaaaacct tgagttaaac
    33661 ctacaacgat attgtaagct aaagctctgt aagttcccca ataagctcta ctttgtctgt
    33721 cttcaccttt tggagaaaaa agaatattat tatctttaat ctcaacattt acatttgctt
    33781 tagtatcaag ttcttttgct aaatttcctt ttttaaattt aagcaaattt ccttctaatt
    33841 ttacttctac tcctgctgga atagcaatcg gttgtttacc tatacgagac atatttttcc
    33901 tttttatttg tctaggatat ttctactttt ttaaaagaat ggatacccaa tgccataaaa
    33961 agcagatttt ttaccaaatg gtacataaaa tttcgccgcc aacacctgct ttataagctt
    34021 catcattagc taaaacacca tgacttgtgc taactacgat agtaccataa ccatttttaa
    34081 aacgcttgat ttcatcttta cctttataaa cacgacgacc aggcttagaa attcttttaa
    34141 gctcattgat aacactctta cctttttcat cgtattttaa aactacattg ataaatttct
    34201 ttttatcttc ttcaataaca ttaaaactct caatatagcc cttagcttga aaaattccaa
    34261 ctaaagcttc tacaacttta gaatgtaaaa gcttggttgt ttcaagcttt ctcattcctg
    34321 catttctgat acgagtgagt gaatctgaaa taatatcatt tatcatattt tatccttacc
    34381 aacttgcttt cttaagacct ggaatcaaac cttcgttacc catttttctt aagcaaactc
    34441 tgcaaattcc aaaatctcta taaaccgaat gcggacgccc acaaatttgg catcttgtat
    34501 aagctctaac cttaaattta ggcttgcgtg ccgcttttgc aatcattgat tttttagcca
    34561 tcttactttc cttttgtaaa tggcacaccg ataagttcta ataacttttg tgcctgttta
    34621 tcattttgtg ctgttgtaac tatagaaatg ttcataccat gagttcttaa aattttatca
    34681 tactccactt ctgggaacat caactgctca tcaagaccga agttatagtt tccgcgtcca
    34741 tcaaaaccat ctctacttaa acctctaaag tctttcaccc ttggcaaagc aatagaaatt
    34801 aatttatcaa gaaaagcata catattttct tttcttaaag ttaccattac acccacagga
    34861 aaaccttcgc gaactttaaa tcctgcgact gattttttag ctttagtaat cacagccttt
    34921 tgtcctgcaa ttaaagaaat agtatctgca acattttgca atactttttg atctttagcc
    34981 aactcaccag cacctacgct gataactact ttttcgatca cagggataag cataggattt
    35041 ttaatatcaa attctttaac caatgcaggt ttaatgcttt gattgtattt ttcttttaat
    35101 ctcatcatcg cttactcctg aacttttgcc acattggaaa tatccattgg catttcttta
    35161 ttgataaaac caccatttgg gtttttctcg ctcggcttaa tagctttttt agcgattttg
    35221 catccttcaa ctaccacttt aagtgttttt ggatataccg ctaaaacttt acctgtttta
    35281 cctttatcat cacctgtgat aaccttaacg ctatcacctt ttttgatttt taatttaacc
    35341 gccattataa tacctccggt gctagtgaaa cgattttcat aaagccacca tatctaactt
    35401 ctctgcccac tggcccaaag atacgagttc cgataggctc tcttttgtta tcaagaataa
    35461 ccgcagcatt ttcatcaaaa cgaatcaaag aaccattatc tctatgaatt tcttttttag
    35521 ttctaacgat aaccgctttt accacttgac cttttttaac ttttccattt ggtaaagctt
    35581 ttttaacaga tgcaacgatt acatcaccta cggtagcgta tcttctttta ctacccccta
    35641 aaaccttgat acacattaat tcttttgcac cgctattgtc agcaactgca agtcttgtaa
    35701 aactttgaat cattactcaa ctcctgtagc taatacagat tttaagcgaa atgattttct
    35761 ttttgaaagt ggtctgcatt ctactgcaac aacagtatca ccaactttaa cttcatttct
    35821 ctcatcatga attagatatt ttttaaagcg tttaacaatt tttctatatc ttggatgaac
    35881 cacttttctt tcaaccaaaa cacttgcggt tttttcacca gcgattttaa caacaacgcc
    35941 ttgaatttct cttttaaatg ccattttcta tccttatctt aaagcgttaa ttgctgtatt
    36001 tattctagca atgtcttttt ttacttggct aatctctttt ggattagtaa gttgcattgt
    36061 ttttagcttt tgttttaaag tgaataaaag cacctttttt tcttttagca ttgttgcaag
    36121 ctcagctgct gttttatctt taatctcagt atatttcatt ttggctctct cttgtaacaa
    36181 acttagtttt aaatggaagt ttatgcatag ctaaagtcaa tgcttctctt gccatttctt
    36241 cgcttactcc tgccatttca taaatgatac ggcctggctt gatattcatt acccattctt
    36301 caacagcacc tttaccttta cccatacgag tttctaaagg tttttttgtc aaaggcttat
    36361 ctgggaaaac tctaatccaa gtttttcctt gtcttttaac aaaacgagtt aaagcgatac
    36421 gtgctgcttc gatttggcgt gagttaatgc gtcctgcttc agttgctttt aatgcaaatt
    36481 caccaaaagt aaattctgtt ccacgattag cataacctct gttacgccct ttcatcattt
    36541 tgcgatattt agttcttttt ggcattaaca tgattattta ccccttcttg tgcgtcttgg
    36601 ctttttagct ggagcacttt cttcagtttt ttcaggttgc atacctttgt gtaatacttc
    36661 acctttaaag atccatactt taacccctat gtttccataa gtagttctag cttctgcaaa
    36721 accataatcg atttttgctc ttaaagtatg aagtggaacg cgtccttcaa gataccattc
    36781 tgttcttgcc atttcagcac cacctaaacg accagaaact gaaactttaa tccctttagc
    36841 acctgctttt tgcgcacctt gaattacttt tttcatcgct cttctaaaag caattctttt
    36901 ttcaagttga gttgcaacac tttcagcagc aagttgagct gaagctccta cttttctttc
    36961 ttctttgata ttgatattta catctttacc gattaaatct tgcaattctt ttcttaaatt
    37021 atcaacatca ctaccttttt taccgatgat gatacctggt cttgcagcaa ctacagtaac
    37081 gcgaagtttt ttagcagttc tttctactaa aatttgactg attcctgcgt aataaagttt
    37141 tctttttaag aaagctctga ttttgtaatc ttcaccgata ttttctacta aatttgcttt
    37201 agtcggaaac catcttgatt cccagtttct attgattcct agtcttagac caattggatt
    37261 aactttttgt cccattagct ttcctttttc gctgttgctt ttttagtgct tgttgttttt
    37321 ttagctggag cttttgttgt agtagttttt ttagctgctg gagctttttt agctactgtt
    37381 tttttctctt cagctttcac ttctgctttt gccacttcta ctaaaatatg tgaagttggt
    37441 tttctaatac gacttgcact tcctctagct cttggtctaa atctttttaa taccgcagct
    37501 gcatccacac gacaactttt tacaatcact tcatttgctt caaagccgcc atttgctacc
    37561 gcacttgaaa ttgcatttgc gatgtatttt gcacctttat ttggcataaa ttttaaacta
    37621 gccatagcta attctgcatt catcccctga acttctctag caatcaatct tgctttagtt
    37681 ggagataatc ttatgaattt aattaatgct ttactcatat cttatccctt acttaccaat
    37741 tttcttttgc acagagcctt tatgcccttt gaatgtgcgt gttggagcaa attcaccaag
    37801 tttataaccg atgtgatttt cagtaatata aaccggaatg aagcttttac cattatgaac
    37861 attaaatgta agtcctatca tatcaggagt aattgtgctt cttcttgacc aagttttaat
    37921 tggtttatta tcattagcct ttttagcagc gatgactttt ttcattacat gatcatcaac
    37981 aaaaggacct ttttttagtg atctagccat cttactttcc ttttcttctt gaaattatta
    38041 gcttatcgct agctttttta cgacgagttt tcgcaccttt agttggttta ccccatggag
    38101 ttactggatg acggcctgaa tttttcttac cttcaccccc accgtgcggg tgatctactg
    38161 ggttcatagc agaaccacga gtttgtggac ggatacctct atggcgattt ctacctgctt
    38221 taccgatagt tacgttagcc cattcttcat ttccaacttc gccgatactt gccatacatt
    38281 cagctaaaac ttgtctcatt tcgccacttg caagtcttaa aataacatat ttttcttctt
    38341 tacccataag ttgtgcataa gcacccgcag aacggatcat ttgaccgcct ttacctggtt
    38401 ttaactcaac attatgaaca atagtaccca caggaatatt tttaagtttc attgcattac
    38461 ctggtttaat atcaagtccg ctttcagcag ctgcaacgat atctccaacg cttaatccac
    38521 gtggttgaag aatatatctt ttttccccat ctttataagc aatcaaagca attctacaat
    38581 ttctatatgg atcatactcg atcgcttcta ctttgccttc tataccgaat ttacgacgtt
    38641 taaaatcaat aattctgtaa agttttttag cacccgcttc tttatgacga cttgtaattc
    38701 ttccatagct gttacgaccc gcgtgtgctg gaagtttaac aagtagtgag cgtacacttg
    38761 gtttagctgt aatatcttca gaacttaaac ctgtgatata tcttctactt ggagtatatg
    38821 gtttataagt tttaattgcc atcttaagcc tccgtatttt ctaagctaac accttcaggt
    38881 agcttaacat agaatttttt gtaatcgttt ctttgaccta aacgacctct aaaacgctta
    38941 acttttccat ccattcttaa tgaattgatg ctttttggag ttacaccaaa atactctttt
    39001 aaaaccgctt ttaagcctgt tttagtcatc tttggtgaag tttgaataac tacgacacct
    39061 tgctcttgca aattcaaact tttttctgtg taaagtatag tctttatatc agtaatatct
    39121 gccataatta tccctctttt gtaatagatt ctaacgctga tttttctatg ataacagcat
    39181 taaatacaga tactaaataa gcatttactt cgcttacatc aactacatag caatttgcta
    39241 aatttctgta agctaaaagt gttttttcat ctagtaaatc tttaacgatt aaagcatctt
    39301 tgacgccaag ttttttaatc acagcgtttg catcttttgt tttaccactt tcaatagcca
    39361 aagaatcagc agtaaataac gcacctttag ctgctttatc tgctaaagct ctttcaagcg
    39421 ccaatctttt ttgtttttta tttacttttt ggaagtagtt tctttcattt gttggaccaa
    39481 aagcaaccgc accgcctacc caaacgttag ttcttgttga acccgctcta gcaccgccac
    39541 gacctttttg tctccaaggt tttttaccac caccacttac atcacttcta cctttagtat
    39601 gagctgtatt tgctcttaaa cttgcaaggt aagattttac atacaagtaa agattgtgtg
    39661 gatttacttc cgcatatttt gaaggtaaat caagttcacc tgctttttct aatttatcat
    39721 ttaaaacaac tactttactc attttgcaat ccttatttta cccatagcac cattataacc
    39781 tggtactgca cctttaacta ctaaaatttt gttttcagca tcataagata caacttcgtt
    39841 tttaacggtt actttagtat ttccataatg tcctgccatt ttcatacctg gttgaacacg
    39901 acctggccat tctctattac caatagatcc gtggcgtctg tgaaatctag aaccgtgact
    39961 tgctggaccc cctgcgaagt tatgtctttt cataacaccg ctataacctc tacctttagt
    40021 gttaaagctt acttttaaaa tttttgcttc atttaatgga gtttcatcta aatctcctgc
    40081 ttcagtgttt gctacttcta aagtcgcaaa tctattgtat tctgcagaaa gattatactt
    40141 tttttgttgt cctgcgacac atttattact tgctttacct tttggatatg ctactaaagc
    40201 ctttccgcct tcaacttcac atacttttgc atttacaact cttagtaaag ttacagcgat
    40261 acttggatta gtaattgttc tgctcattcc gattttttct acaatatatt ccatatctta
    40321 tccttactta cccatagctc ttacttcaac gcttacttct ggcgctaaat caagcttagt
    40381 taaagaatca actgtatctg gagtcgctgc tactatatct agcatacgcg cgtgaattct
    40441 tatttcaaac tgctcacgag aatctttgtt aatgtgtgga gattttaaaa ctgtatagcg
    40501 tttgatttta gtaggcattg gtatcggacc tctgatatcc gcacctgttc ttttaacagc
    40561 ttctacgatt gctgcaactg ttctgtctag tactcgatgg tcataagctt ttagcttaag
    40621 cctaattctt tccataatat ttcctttaaa aagaactcgt tagttaaaaa ctaaccaatt
    40681 tata
//
LOCUS       DARBAC010000003        29131 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.003, whole genome shotgun sequence.
ACCESSION   DARBAC010000003 DARBAC010000000
VERSION     DARBAC010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29131
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.003"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1523)
                     /gene="recJ"
                     /locus_tag="SB799_000103"
     CDS             complement(<1..1523)
                     /gene="recJ"
                     /locus_tag="SB799_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEG0867379.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIVRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMSKFLELLAIAIIADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLILTKENKTIEALFFNFDKEPELNQNISLLGSISKN"
     gene            complement(1510..3141)
                     /locus_tag="SB799_000104"
     CDS             complement(1510..3141)
                     /locus_tag="SB799_000104"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEG0867380.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESAEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFA
                     RNVLKLKDANSSEFDEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEAKSVKERHRHRYEANPKYRVDFEKHGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICGFIKAAINYEDN"
     gene            3260..3883
                     /locus_tag="SB799_000105"
     CDS             3260..3883
                     /locus_tag="SB799_000105"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEG0867381.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEGEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            4003..5388
                     /locus_tag="SB799_000106"
     CDS             4003..5388
                     /locus_tag="SB799_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEG0867382.1"
                     /translation="MDKQFFKDFLMLSQAHTIATLAILCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAKEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIHEG
                     DKQIREIQTFSNIILGLIPSNIITAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYMA
                     MFIMFGVHFLLLASQGLNPIKYVKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(5427..7796)
                     /locus_tag="SB799_000107"
     CDS             complement(5427..7796)
                     /locus_tag="SB799_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEG0867383.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYF
                     QKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDGGYEKPAKKISTLDSIEGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIHWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(7812..9140)
                     /locus_tag="SB799_000108"
     CDS             complement(7812..9140)
                     /locus_tag="SB799_000108"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0867384.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLIDDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEAIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ISHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDIRKCFDYNYYTKNVDAIFKRTFK"
     gene            9218..10120
                     /locus_tag="SB799_000109"
     CDS             9218..10120
                     /locus_tag="SB799_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0867385.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNKILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILIAKNKKAQIDLKSLFEKKLVQKEYLALAHGKIE
                     ENFIVDKAINLTKNYDDIKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKQQIESILDEKLNPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFDINSKINIKEIFNNSIK"
     gene            10232..11098
                     /locus_tag="SB799_000110"
     CDS             10232..11098
                     /locus_tag="SB799_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEG0867386.1"
                     /translation="MKFVNFIQGQKHNLGVLNSSGKIVSFTDLGIETNDMNEFIIYFD
                     KFKHKLTDLDSKIAYEIPKENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATPPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAEDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIK"
     gene            11194..12108
                     /locus_tag="SB799_000111"
     CDS             11194..12108
                     /locus_tag="SB799_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEG0867387.1"
                     /translation="MKKIIMILYLSYANIVFAVDMITPIPNSISYDKEKAKLGKSLYM
                     DKSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNG
                     RAKDLAEQATVPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAVAE
                     FEKTLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            12098..13876
                     /locus_tag="SB799_000112"
     CDS             12098..13876
                     /locus_tag="SB799_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEG0867388.1"
                     /translation="MTNKKSSFLIKFIILSTLVLAFILVLLGIIFNNYSSSKDNKDLI
                     NTVQQLEISDEKINSVFQNSFNFINYDPSVQAIKKMQENFKKLKTFGIDISKAEEIFN
                     AKLIQLNYFKSANSIAVNSKLYLFELAKNYFEELEQNHETNKNNYRTMSSMLSVLSTE
                     NILQKTTLNQLNNLMKEIKNDTKSENLQLFLKHYKMIVKQISIMQDNSSIYENNSLMK
                     ELKQLNTFTQNAVEQSNLFKFYIALAVFGITLVLFVFFILLTLKKVIMPIHTLEKLSA
                     NLASKEANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKN
                     NSMMLENSSNSQHEQIQGVKEITYVLDDHINLAGNLAQESIENMQDMHILMDKVELTL
                     SELVNLINENNEKEQNVVANMDNLTQSADNIIEITSSIRDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRQLADKTSKSLLNINATVNTIVQQINDNKALMDLIHDSMKETS
                     SKTNDLQQELVNSMHKLESSIESTQTMKDKSMEVKDKMLILGTNIDKVNELANSVKDL
                     SCEINNISQNVLNGASKLSEKLSSFQ"
     gene            13982..14149
                     /gene="dba"
                     /locus_tag="SB799_000113"
     CDS             13982..14149
                     /gene="dba"
                     /locus_tag="SB799_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HEG0867389.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            14161..15687
                     /gene="dsbI"
                     /locus_tag="SB799_000114"
     CDS             14161..15687
                     /gene="dsbI"
                     /locus_tag="SB799_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HEG0867390.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANFVFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFETELNGEKFRKYTKFSFAAVL
                     ISTIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGEGLGRGRLDTVRAKFNHVASMSTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(15708..16382)
                     /gene="queC"
                     /locus_tag="SB799_000115"
     CDS             complement(15708..16382)
                     /gene="queC"
                     /locus_tag="SB799_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEG0867391.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     RECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVY
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKVGFKD
                     KIKYKS"
     gene            16459..17685
                     /locus_tag="SB799_000116"
     CDS             16459..17685
                     /locus_tag="SB799_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEG0867392.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEEGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINERILPFVPEGLRAEFSYILGIREGRNDESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKALKYCDKIAAYIEAELSISYGVKSKELESGFLGMYEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            17777..18301
                     /locus_tag="SB799_000117"
     CDS             17777..18301
                     /locus_tag="SB799_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HEG0867393.1"
                     /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWP
                     ADALERVTPPKIFLEQLGLPTDWTYMFSGMQMPLSIFIVHVSFSIVFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIVMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(18313..19989)
                     /gene="ilvD"
                     /locus_tag="SB799_000118"
     CDS             complement(18313..19989)
                     /gene="ilvD"
                     /locus_tag="SB799_000118"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEG0867394.1"
                     /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFNKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYEAKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDVHKAGGVSAVMAEISSRQ
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAEQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANLSEEEITQRKKEFVLPQKEVPSRWLRMYQKLVSNASKGAVLDME"
     gene            20149..20796
                     /locus_tag="SB799_000119"
     CDS             20149..20796
                     /locus_tag="SB799_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HEG0867395.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            20861..21100
                     /locus_tag="SB799_000120"
     CDS             20861..21100
                     /locus_tag="SB799_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEG0867396.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKSIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE"
     gene            21133..21708
                     /locus_tag="SB799_000121"
     CDS             21133..21708
                     /locus_tag="SB799_000121"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEG0867397.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKKL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKTGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADASILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKELIAKFGICKLHRKSFKLL"
     gene            complement(21709..23154)
                     /locus_tag="SB799_000122"
     CDS             complement(21709..23154)
                     /locus_tag="SB799_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEG0867398.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERVLNFKEFTIPLDKKEQEIQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWEEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAIIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADTAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKA
                     INVEIPNSKKTYKADLVLLAMGFSGCEEAIAKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(23165..27655)
                     /gene="gltB"
                     /locus_tag="SB799_000123"
     CDS             complement(23165..27655)
                     /gene="gltB"
                     /locus_tag="SB799_000123"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEG0867399.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKPSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHIAYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
     gene            complement(27790..29097)
                     /locus_tag="SB799_000124"
     CDS             complement(27790..29097)
                     /locus_tag="SB799_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEG0867400.1"
                     /translation="MILTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGVFSHL
                     ELVDTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLL
                     LSIALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLP
                     VGFGLTFQDLLKDNLNANNVSVSLNDVTNTMYFAAICMIAGLFLALFVFYRKPREYQE
                     VEIAKVDLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSK
                     VNEVFDDGLKMMGFIAFVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFML
                     LIGLIITMGIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASET
                     TMGTTVGLNADKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT         9837 a         5273 c         4225 g         9796 t
ORIGIN      
        1 tcattcttag aaatacttcc aagcaaagaa atattttgat tcaattctgg ctctttatca
       61 aaattaaaaa ataaagcttc tatggtttta ttttccttgg ttaaaataag ctttaagtgt
      121 ttttcatctt tacctagaag ttttttattt tttacacaaa gattttctaa aacaaaaaaa
      181 ggtcgtggat ttttatgtcc aaaaggttca aaagattcta aaatttcaag catttcaaaa
      241 tcaatttcac taggttctaa gattcctaaa atttcatctg tatccaaaaa ttcactttca
      301 gaaatttgcg aacattcttt tttgatttta tttttaaatt gttcaaaatt ttcagagttt
      361 aaactgattc cagcagcacc tttatgacca ccataattgc ttaatataga atttgtctta
      421 gaaattaaag ctaaaatatc aatcttgcca acacttcttg cgctaccttt taagtgttct
      481 tcattttgag aaaatacaaa agcaggttta ttaaaatgtt tagctaaacg acttgctaca
      541 atccctaaaa ccccttcatg ccaatttaaa cccgatacca caatacaaga atcgttttca
      601 tcgatttgat ttaaactatc ttcaaaaagc tgtttttctt catctttacg actttcatta
      661 aaactaacaa tttgctctag atattctaaa gctttattaa aatctttagt gtgtaaaaat
      721 tcataagaaa tacttgcatc atccattctt ccagcactat ttataagcgg agcaattaaa
      781 aatcctatat tatcaagagc aaatttatcc ttttgataat aatgcttaat agcccgaaaa
      841 gcagctcttt tagatttgtt aatatgatct ataccacgcc ttactaaagc acgatttaaa
      901 tctctaagct ccatcatatc tgcaataatt gcaatcgcca aaagttctaa aaatttactc
      961 atatcgtatt taagcttgca aacttctttt aaagctgcta tcaaatacca tgccacttga
     1021 gctccacaaa tttcaatttc tggaaaatca caatcttttt gctttggatt gataatggca
     1081 aaagcatcag gcaaaacatc ttgaggcata tgatgatcag tgataatcaa atctatattt
     1141 ttttctttgc agagtttggc tgcttcaaga gcagctattc cattatctac tgttattatt
     1201 aaattcacat caagttcgtt gataatctca gcatttaatc catatccatc tttaaaacga
     1261 tttggaattc ttactatata atcaaaacct atatcatcga aaaattctgc cataataaca
     1321 caagaaatga ttccatcaac atcataatcc cctactatgg cgactttctc atttttttct
     1381 acagcttctt tgatgcgatt agctgcttta tatgcatcct ttaaacagca tggcaaaggc
     1441 agatcacaaa gtttggtatg caaatctttt tcaaagcgtg aagccaaaat ttttttaatt
     1501 tcatttttat taattatctt catagtttat agctgccttg ataaaaccgc aaatcacagg
     1561 attaacatgc tcaagtcttg atgtaaattc tggatgaaac tgcacagcca agaaaaaagg
     1621 atgacagtta agctcaactg cttcgatcaa tcctttgctt tcgccactta caatcaaacc
     1681 gtgtttttca aaatctaccc tatattttgg atttgcttca taacggtggc ggtggcgttc
     1741 ttttacactt tttgcttcat tataaacctt agccaaaagg gatttttcct tgatatcaca
     1801 tttataagcc cctaaacgca tagttccgcc taaaggagtt tttgcagtac gaatttgttt
     1861 ttctccattt gtatccataa attcatcaat caaataaacc acaggatttt ggcatttctc
     1921 atcaaattca cttgaatttg catctttaag ttttaataca tttctagcaa attccaccaa
     1981 agcaagctgc atacccaaac aaattcctaa aaaaggaatt ttattttctc ttgcgtattg
     2041 aatggctttt atcttgcctt ctacaccacg atatccaaat ccccctgcaa ctaaaattcc
     2101 actcacatct ttaaatactt cagcactttc catattttca agtttttcac tatctaccca
     2161 ttttaactcc actttagtat ctagggctgc acctgcatgt ataatagctt cagtaaggct
     2221 tttatagctt tcttttaaat ccacatattt gcctacaaaa gcgattttaa cttcattgct
     2281 tggagctata actcttttta ccaaagagtc ccaattttcc atattaggtt ttaaattttt
     2341 caaatccaaa atttcagcaa taggacttaa aatatcttgc tttaaaaaat taagtggaat
     2401 ttgataaata ctagccgcat caacactttc tatcacgcaa tttttttcca ccccacaaga
     2461 aatagcaatt ttatctttta aatctctatc aagagctttt tcactacgac aaataatcat
     2521 atcaggacta atacctatgc gtcttaactc gcctacacta tgttgagttg gctttgtttt
     2581 taattcccct gcagccttga taaaaggtac tagagtaaga tgaatattca tagcattatt
     2641 tttacccact tccaaacgca aagcacgaat agcttctaaa aaaggcaagc cttctatatc
     2701 cccaacagtt ccgcctattt caacgatgag tatatctttg ccttctcctg cttttttaat
     2761 gcgatctttg atttctccta ctatatgagg gataacttga atggttttgc caagatattc
     2821 tccacgcctt tctttttcaa tcacactttg ataaacgcgt cctgtagtaa agttattatc
     2881 ttgagataaa ctctcatcca aaaaacgctc ataatgcccc aaatcaagat ccgtttctgc
     2941 tccatcatca gttacaaaaa cttctccatg ctcaaaagga ctcatagtac ctggatcgac
     3001 attaatataa ggatcagctt ttaaaatact cactttaaga cctgaatttt ttaaaagtgt
     3061 tgcaatactt gctgcggcta tccctttacc caaagaactt aaaactccac ctgttacaaa
     3121 aatatatttt gtttgtttca ttgataataa gccttatttt tttatctaat tataacttga
     3181 taaaactttt tatttcatta gaattttaag taaaaaatgc aagaattaca aaaaatattt
     3241 ttatcaaaaa ggaataagca tgcaaatcac tttacttttt cacactccat tatctgtttg
     3301 ttctcatgca acaagaactt gttggcaaag ctttgaaaaa ggcgattgcg gtggcgaaaa
     3361 agataaagaa cttatcgatc gtgtgggtaa taaattcaaa cacgcttcaa ccttagagca
     3421 tttaaactat actttttata tacaagggat ttcaagagct tgtttgcaag aagtcgcaag
     3481 acaccgtcac actagtccta gtgtaaaaag cacgcgttat accttaaaag aacttcgcaa
     3541 tgaaggtgag tttaaaatag gagattttga aaatgcaagc cgttatcttg tgctttgtgg
     3601 taatgaagag gttgataacg caagcattaa agccttagaa aatttacgca ctattttaca
     3661 aaaaagcatt agtctagata tagccaaata ctgcttacca gaaagctata aaaccgaact
     3721 tacactaacg attaatgcaa gaagtttaca aaattttata tctttgcgta gttcaaaatc
     3781 agctctttgg gagattagaa atttagcaaa tgctttattt gaagccttac cacaagaaca
     3841 caaatttata tttgaacatt gcctacataa agatatagaa taaatcatac taattttatc
     3901 ttatttaaaa tatttttatg ctaccattta taaaatcaag ctttatgcaa gtatattttc
     3961 atataccttg tgcttgatta tagtttctta taaggacttt ttatggataa acaatttttt
     4021 aaagattttc taatgctttc acaagctcat actatagcta ctcttgctat actttgtgtt
     4081 gttttttacg cattaaaaaa aatgcgggat ataaaaatca atttttctct tcgcatgcta
     4141 tttgcgcttt taatgggttt ggggtttggt tttgctttgc aatatttggc aaattttcca
     4201 gatgctaaag aagcaagtaa tattctttgg tatagtgaaa caaaacattg gtttgcattt
     4261 gtaagttctg tttttgtagc ttttataaaa atgctggttg ttcctcttgt aagcatttgc
     4321 attataaaag taattataga aattgataaa aatatcaaaa tatcctcctt gcttggaata
     4381 agtctttttt ggatactctt tagcacagcc atagctgcaa ccttgggtat atttttaggt
     4441 tatagttttg atttaggaag taattttgcc atacatgaag gagataaaca aattcgcgaa
     4501 attcaaactt tttcaaatat tatactaggg ctaataccta gcaacatcat tacggctatt
     4561 aataaagaaa atattatagc tattgtcatt ttttcttttt ttataggaat tagtgctaaa
     4621 aaaatttcta aaaaagaaga gtatgaacaa gcctttaaaa gttttcataa ttttatccta
     4681 accttttata atattatgat gaacatgact gctacagtta ttagatttat gccttatgct
     4741 gtagtttgta tgatggctaa tgtgctttta agcaatggtt ttgaagctat caaaacagct
     4801 ggacttttta taatgcttat ttatatggct atgtttataa tgtttggggt gcatttttta
     4861 cttcttgctt cacaagggtt aaaccctata aaatatgtaa aaaaagcctt tcctgtatgg
     4921 ttatttgcat ttagctcaag atcttcttta ggcactttgc ctatgaccac ttcaacttta
     4981 caaaataaat ttggagttaa ttcagctata gctaattttg tagcatctat aggtacaaca
     5041 acaggactta atggttgtgc gggatatttt ccagctttag cagcagtttt tgtagctttt
     5101 gctacacata cacatattga ttttacattt gctttaatga tagttttggt agctgttatt
     5161 ggatccttgg gtatagctgg ggtacctgga agtgcaacta tggcagcttc tattatgcta
     5221 gcagggattg gatttggtaa taattttgtc atgctaagtt tgattttagc catagatcct
     5281 attatagata tggcaagaac agcaagcaat gtctcaggag ctatgacttc ggcactttgt
     5341 actgcaaaaa atctaaaagc tctagataaa gaaatttaca attcttaatc ttttaaaacc
     5401 caatgctttt cattgggttt tagtatttat tggcaacctt cacattctat gctacgatct
     5461 gcaacattga ctttttcact atcagggctt tcacttctta aataataagt agattttact
     5521 ccaagctccc aagcgagttg ataaatttca tttaaatatc ccccacttgc tttatcaagt
     5581 gataaaaaga tatttaaact ctgcccttga tcgatccatt taccacgcac agcagcagcc
     5641 tttacaagaa ttttttgatc aagttcgtag gctggagtat agtattgcca agtatcaagg
     5701 cttaaatttg gcacaacaac aggtatcata ccacttaaat tttgttcaaa ccactttctt
     5761 ttgtaaacag gttctatagt ctgcgtagta cccaccaaga tagaaataga agaagtaggc
     5821 gcaatggcca tcaaataacc atttctcata ccatcttttt taactttttc tctaagttta
     5881 acccagtcgc attcactttg atcaaataag ccctctctta aagttaaagc tttagcctta
     5941 ggacttgcta catcaatagg aaaaatcccc ttgctccaat ttgatccttc aaaatcttca
     6001 taagaacctt tttcaagagc taaatttgaa ctcgcattaa tagcctcaaa gctaatttgc
     6061 tccataatct catcgatttt atttaaatgc tcatcgcttc cccaatgaat cttagcctca
     6121 gcaagcattt gtgcctcgcc cataactcca agacctatgg cacgagattt taaatttgta
     6181 tcttttactt ttctatgagg ataaaaattt aaatcaatta cattatcaag catacgaata
     6241 gctgttggaa caacacgctc tatatcttct ttagtatata ctttgctaag atttatactt
     6301 gctaaattac aaacggctgt ttttccatca tttttatatt tttccactat ataaacttta
     6361 ttaccttcaa tactatctaa agttgagatt tttttggctg gtttttcata tcccccatcg
     6421 atcacaacct tttgctcttc atcaaaatga agctcatctc cattttcaaa aactacttta
     6481 atttgataat aatttggctc ggtattttga aaaatttcag tacataaatt tgaacttcta
     6541 ataattccta catgagcatt tggatttgct ctgttggcac tatctttaaa acataaaaat
     6601 ggcaagcctg tttcaaaata atttagcaaa attttcttcc aaagctcttt agcttctacg
     6661 atttctttgg taatgctttc atctttttca tattcttcat agcgtttttc aaaagcttca
     6721 ccatacaaat cacacaaatc cgctgtatct gcaggatcaa aaagagtcca tttatcatta
     6781 gctcttactc ttttcataaa aagatcattg atccataaag cagggaaaag ttcatgagca
     6841 cggcgtcttt cttcgcctga atttttacgc aaatcaataa aatcacttat atccatgtgc
     6901 caaggttcta tataaaccgc tatagcccct tttctggttc ctagttgatc tactgccacg
     6961 gcaatatcat tagtaatttt caagaaaggt ataatccctc ctgcggcatt tttatgccca
     7021 tctatgcttc cacccatagc acgcacttta gaccaatccc aacctatacc accaccaaat
     7081 ttagaaagca aagccatttc ttgataagaa tcaaaaatac cttcaatatt atcaggggtt
     7141 gatcctatat aacaagagct aagctgatgg cgtgttgttc ttgcattaga taaagtcgga
     7201 gttgcaagca tgagttcaaa tttagaaata agatcgtaaa atttcttcgc ccattcttga
     7261 ggattaaatt cattctgcgc taaaaacatc gcaatggcca taaacatttg ctgaggaagt
     7321 tctataggca tacctttact atctttaatc aagtatctat catataaagt tttaatacca
     7381 agataagtaa attgcatatc gcgttcaggt ttaatataag catttaaatc atctaaatca
     7441 tatttttctt taagaccaag taaaattctt ccttcttttt cacccttttg aaaatactca
     7501 cgcaaatgat tatagcgatt cataccatta acttttttat ataaatcaaa taaaaaaagt
     7561 ctagctgcaa caaaggtcca atttggacaa tcaatatcta tcttatctac tgcagtttta
     7621 attaaagttt tttgaatttc ttcagttgaa attccatcac gaaattgaat ctttgcatca
     7681 agttcaagtt cgcttaaatt cacaccttct aaatctttta cagcatcaga ggtgcatttt
     7741 ttgatcttag aaacatccaa ttcttctgta cgaccatttc ttttaataac tttcattgcc
     7801 ttccttgctt tttatttaaa tgttctttta aaaattgcat caacattttt tgtatagtag
     7861 ttataatcga aacattttct tatatcctct tcgctcaaac tttttcttaa atcttcatcg
     7921 cttaaaagcg ctaacaaaaa caaactttca tttttttcat tgatagcagc cttgccattt
     7981 tgcaaatctg cccaaacttt catagcgttt ctttgaacta ttttataagc ttcttcacga
     8041 ctaatgcctt taaatggaag ctctaaaagc acccttcctg aaaatacaag cccgcctgta
     8101 agatttaaat ttttcatcat attttcagga taaaccaaaa gcttatcaat caaatttgta
     8161 agacgcataa gcataaaatc agccgtgata aaagcatcag gcaaaataaa tctttcaacg
     8221 ctagaatgag atatatctct ttcatgccaa agtgcaacat tttccaaagc tggagttaca
     8281 aaagatctaa gcacacgaca aagtcctgtg atattttcac ttaaaacagg atttctttta
     8341 tgtggcatag ctgaacttcc tttttgtcct acactaaaat actcctcagc ctcataaact
     8401 tcagttcttt gaaaatgtct tatggctaca gcgatttgct cacaacttga agctaaaatc
     8461 gcaatagcag aaataacctg agcataacga tctctttgaa tcacctgatt tgaaacagga
     8521 gcggccttaa gacctaaatt tttacaaact tcttcttcaa attctaaagg agcatgagca
     8581 aaatttccca ttgcaccgct gatttttcca tagcttatca cttcttttgc atgttctaaa
     8641 agctcttttg catgcgaaat ttcatcatac caaatagcta acaccaaacc aaaagtaata
     8701 ggttctccat gaattccatg acttcttcct accattaagg tgtttttatg ctccaaagca
     8761 cgctttttga ttgcttctaa aagcaaagaa acatcttcta aaataagctc caaactctct
     8821 tttatctgta aagcaacagc tgtatctata caatcagaac ttgtcattgc ataatgcaca
     8881 aaacgactct cttctcccaa actttcactt acacttgtaa gaaaagctat aacatcatgt
     8941 tttgtggttt tttctatttc atctattctt gcaatatcaa attttgcatt tttaagaatt
     9001 ttttcgcagt ctgtgtcatc aatgagaccg agtttattcc aagcttttac agcggctaat
     9061 tctactttta accacgcatc gtattttgct tgcatgtccc attttttagc catgatttct
     9121 ctgctatatc tttcaaccat ctttgaaacc tttttagcta taattttata ttttaaaaaa
     9181 cagaaattat atcaaattat cctaagaaag ttattaaatg gcctacataa aaataaaact
     9241 ctcaaacaat ggaaaaaagg cgtttcaagt ccttatggaa aatttaaaaa ttagcataaa
     9301 tgaagcacaa aaactcatag acaaaaaaag gcttttttgt gatggaattt tagtagaaga
     9361 aaagaataaa attttaaatg gtttagtaga gcttatagtc tatgaaaaca atcccaaagg
     9421 agtagaaatt gtctttgaaa atgaagactt tgccatactt gaaaaagaaa gtggaatctt
     9481 aagccatcca aatggtagac attgcaaata cagtcttagt gatgaaattt ggcatctttg
     9541 gggaaaagaa gcttgcgtag cacacaggct cgataaagaa acgagcggac ttatacttat
     9601 agccaaaaat aaaaaagctc aaattgatct taaaagcttg tttgaaaaaa aactagttca
     9661 aaaagaatac cttgctctag ctcatggaaa aatagaagaa aattttatag ttgataaagc
     9721 tataaattta actaaaaact acgatgatat aaaaacaaga atgcaaattt gcaaagaagg
     9781 aaaacaagct atcactgaat ttgaaatttt agaatacttt cctaaaatca acgctactct
     9841 tttactttgt aaacccttaa caggcagaca acatcaaata agagtacatt tgcattataa
     9901 aaatcatacc attttaggcg atccacttta tgggcttagc aaacaacaaa tcgaaagtat
     9961 tttagatgaa aaattaaatc ctaaagaacg cttaaaactt acaggtgcct tgcgtttgtg
    10021 tttgcattct tatcgtttga aatttcaata taaaaatcaa aattttgata tcaactcaaa
    10081 aataaacata aaagaaattt tcaacaattc cataaaataa aatgatgttt cactacgcta
    10141 caatcaatca cttttttacc aaattttaaa acaaaaaaat aattcttgct aaaactttaa
    10201 gtataattaa ataaaaaagc gagattttcc aatgaaattt gttaatttta tacagggtca
    10261 aaaacacaat ctaggagtac taaattctag tggaaaaatt gtaagtttta ctgatcttgg
    10321 cattgaaact aacgatatga atgaatttat tatctatttt gataaattta aacacaagct
    10381 tacagacttg gattctaaaa tagcctatga aattccaaaa gaaaattatc tagcccctat
    10441 tatagaacct cgtcaagata ttatatgtct tgggattaat tttttagatc atgccaaaga
    10501 atctgccaaa tttaagggtg aaaaatttga agaaagagaa tatcctgtat attttggaaa
    10561 acgctgcaat caagctacgc caccttttgg cgatatacct ttacatgcag atgtaacttc
    10621 tcagcttgat tatgaatgtg agcttgcatt tattttaagt aaagatgctt ataaaatcaa
    10681 agctgaagat gcaaaagatt atatctttgg ctatactatt atcaatgaaa tttcagctcg
    10741 cgaacttcaa aaacgccaca aacaattcta ccgagcaaaa agtcttgaag gtagcactat
    10801 aatgggacct tatatcacaa gcgtagatga aatttcttat cctcctaaac tccaacttca
    10861 aagctatgtc aatgatgaac tacgccaaaa ctctaacacc caattgttta tttttgatat
    10921 tgcttatgtc ttagaagaac ttagcgcagg catgctttta aaagctggaa gtattatatc
    10981 tatgggaact cctagtggag taggtatggg gttaaatcca cctacttttt taaaatcagg
    11041 agataaagta cgttgtgtca tagaaaattt aggagaactt tgtaataaaa taaaataaaa
    11101 aaacattaaa taaaaaatat caattattaa ataatttact aaaattacac tataatggca
    11161 ttttaaaaac ttaaattaag gcagaaattt accatgaaaa aaataataat gattttatat
    11221 ttatcttatg caaatatagt ctttgcagta gatatgataa cccctattcc aaattccatc
    11281 tcttatgata aagaaaaagc taaacttgga aaaagtcttt atatggataa aagtttatcc
    11341 aaagatggaa aagtttcgtg caatacttgc cataggcttg atcaacacgg cgttgatgga
    11401 cttgaatttt caataggagt tgataatcaa ctcgataaac cctttaatac tcctacaacc
    11461 tttaattctg tgtttaattt tgtgcaattt tggaatggca gagctaaaga tttagcagaa
    11521 caagctacag tacctttttt caatcctaaa gaaatggggc taagtcctga acttctttta
    11581 caaaaagtta attcaaatga aaattatgta aaaactttta aaaaacttta tggagaagtt
    11641 acggtagaaa acatagccct tgcagttgct gaatttgaaa aaaccttgat cactccaaat
    11701 tctccttttg atcgctatct tagcggggat caaaatgcta tttcagctca agctaaaaaa
    11761 ggttatgaag attttaaagc caatggctgt atctcttgcc atcaaggtca aaatataggt
    11821 gggaatatgt ttcaaaaaat cggtattttt gaagaatacc caaaccaaga agatttaggg
    11881 cgctatgaaa tcacaaaaag agaagctgat aaaatggtat ttaaagttcc tagtcttaga
    11941 aatatagcca aaaccgcacc ttattttcat gatggatcta tacctacttt agatgcttgt
    12001 gttcaattta tggcttacta tcaactagga aaatttttag atcaagaaac agttgacaat
    12061 atagtcgcat tcttagaaag cttaacagga gaatatcatg acaaataaaa aaagttcatt
    12121 tttgataaaa tttattattt tatctacact agttttagct ttcattcttg ttttattagg
    12181 tattattttt aataactatt cttcatctaa agataataaa gacctgataa acacagttca
    12241 acaactagaa atttcagatg aaaaaatcaa ttctgttttt caaaatagct tcaattttat
    12301 caactacgat ccaagtgttc aagcaataaa aaaaatgcaa gaaaacttta aaaaacttaa
    12361 aacttttggg attgacataa gcaaagcaga agaaattttt aatgccaaac taatccagct
    12421 taattatttc aaatccgcaa attccatagc agtaaattca aaactttatt tgtttgaatt
    12481 agctaaaaat tattttgaag aattagaaca aaaccatgaa acaaataaaa acaactatag
    12541 aacaatgagt tctatgttaa gcgttctttc aactgaaaat attttacaaa aaacaacact
    12601 aaatcaactc aacaatctta tgaaagaaat caaaaatgat acaaaaagtg aaaatttaca
    12661 acttttttta aaacactata aaatgattgt aaaacagatt tctatcatgc aagataattc
    12721 ttctatttat gagaataatt ctcttatgaa agagttaaaa caacttaaca cttttactca
    12781 aaatgctgta gaacaatcca atttatttaa attttatatc gctttagcag tatttggaat
    12841 tactcttgta ttatttgtat tttttatttt attaacacta aaaaaagtca tcatgccaat
    12901 tcatacttta gaaaaactaa gcgctaattt agctagcaaa gaagccaatc tacactctcg
    12961 tttaaacata gatccaaaaa gtgagcttgg acaaagtgct caatatatta attcatttat
    13021 ttccaccgtt caaaactcaa tcatagaagc catagaaaat gctaaatcaa gtcatcaaaa
    13081 ttcacaaaaa ctcaaaaata actctatgat gcttgaaaac agctctaatt cgcaacatga
    13141 acaaattcaa ggcgttaaag aaatcaccta tgttttagat gatcatatca atcttgcagg
    13201 aaatttagca caagaaagta tagaaaatat gcaagatatg cacatactga tggataaggt
    13261 agaacttact ctatctgagc ttgtaaattt gataaatgaa aacaatgaaa aagaacaaaa
    13321 tgtagtagcc aatatggaca atctaaccca aagtgcagat aatattatag aaattacaag
    13381 ttctattaga gatatagccg atcaaaccaa tctacttgcc ctaaatgcag ctattgaagc
    13441 tgcaagagcg ggcgaacatg ggcgtggatt tgctgttgta gctgatgaag ttagacaact
    13501 tgctgataaa acaagcaaat ctcttttaaa catcaatgct actgttaata ctatagtcca
    13561 acaaatcaat gacaacaaag ccttgatgga tcttatccat gattctatga aagaaacctc
    13621 ttcaaaaact aatgatttac aacaagaact tgtaaattct atgcataaat tagaaagctc
    13681 tatagaatca acccaaacca tgaaagataa aagcatggaa gtaaaagata aaatgcttat
    13741 cctaggaaca aacatagata aggttaatga acttgcaaat tctgttaaag atttatcatg
    13801 cgaaatcaat aacatctctc aaaatgttct aaatggtgct tctaaactct ctgaaaaatt
    13861 aagtagcttt cagtaacttt tttcgtgtta atttaaatta acacgaaatt ttaataaaaa
    13921 atttattttt aatttatgtt tttcaagtaa aattagcggt ttttatttca aaggagatac
    13981 tatggagttt cttgaacttt tattagtttt aatcgccttg atactgatta tcaaaaaacc
    14041 agaaaaagaa aatttggctt ttggtttggt aatggtagct tggcttttaa tggttttttt
    14101 ctatgttggc cacaaaacag gcgcactatt aacaataatg aatctgtaag gaagggctag
    14161 atgaacgaaa tcaataaaac aaaaaatttc tacacgctaa tgtgtttagc aggctttttg
    14221 atcatactct tgcctgtagg tattgcaaat tttgtatttg gttatatgtt gggcgatagt
    14281 ccttgcacgc tttgctgggg acaaagagaa gcaatgatct ttatcggtgt aatggcgctt
    14341 ttcattgttc gttatggtat gaaaggcaaa taccttgccg ctcttttaat catgacagca
    14401 gtagggcttt atcagtcttt tgctcactat ggcaatcacg ctcatagaga tttagatcaa
    14461 ggttttggtt tagcagtttt tggtatccat acttattttt gggctgaagt agtattttgg
    14521 gctgttgtat tgcttttggg tgtgattttt gcttttgctc ctaaatttaa tgcttttgaa
    14581 acagaattaa acggggaaaa atttagaaaa tacactaaat ttagctttgc ggcggtttta
    14641 atcagcacca tcatcgtagc ttcaaatgtt ttccaagctt ttgtaagcac aggaattcct
    14701 ccttatgtag gacaaggcga tcctgtaaga tttagcttaa atccaaaata catcatttgg
    14761 agtaaagaag gttggaatgg tttatggcaa aatatttctt tcttaggaaa gcgtgatgtt
    14821 aaagctcctg attatgcttt tgcacctgca agtgaaaaac ttggcataaa atttgataat
    14881 gatatcaaca atgctccatt tgcaaaaatc aatgatgagc ttaaaatcac aaatgaacaa
    14941 accataaatt ttgacaaagc catcaatact cttgattata tcaacaatga atttgtagca
    15001 agttctaaat gggatgtggc tttcttagac aataatttta gcgttaaaga aggttttgag
    15061 cttgatcctt atttttcggc ttctattgat ccaatcatcg gtatcatacc ttatatgaac
    15121 gataaattca ttcttatggg ttcaaacaaa tctttcttaa gatttgcaaa aaatcctaat
    15181 gcaagtgaag aagatatcgc taaacaatac gctgattttg taaaaggtaa tgataaattt
    15241 aaaggccaag gcgaaggttt aggtcgcgga agacttgata ctgtaagagc gaaatttaac
    15301 catgtagcaa gcatgagcac agatggaaat tatctttatc ttgcaactgt tccaaacaac
    15361 aaagacgcta aaacttttgt gatctctaaa gtttctttaa aagatcgtgt tctttcagga
    15421 gaatttactc caaaagcaaa tcttaaagaa ggtaaaactt taggcgatct ttatgtaact
    15481 tctatgactt ttaaagatgg ggaaatttat gcacttagta aaaatcacaa tgtgattgct
    15541 gtaattgatc cagttaagga agaagtagta aaaactatcg ctttcccaag ctctatcact
    15601 aatgctagaa gcattttctt taaagatgga aaaatcaaca ttctttctta tcaagatgga
    15661 gcaaacaagc tttatactct aaactaagct ttaagtccta gtgaaaacta ggacttatat
    15721 ttaatcttat ctttaaaccc tactttttca aaacctctta aacgaagcaa acaactatcg
    15781 cactccccgc aagcttcatc ttcactctca taacaagacc aagtaagttc taaaggtaca
    15841 ttttctttta aggctagttc tacaatttta gctttgttca gtctaacaag cggagttttt
    15901 atataaactt tgaaattctt actcgtgcct tcattgataa attcttgtgc cttttgtata
    15961 aactcatcag tacagtcagg ataaccactg ccatcttctt ctaccacccc tataaaaata
    16021 ctctcacaat tttccttttc agccaaagat cctgctatgc ttaagaaaat tccattgcga
    16081 aaaggcacat aagtgatagg tggggtatcg cttatgcaaa gctcattttt aggaatgtct
    16141 atacttttat cggttaaggc attaccccct atatctttga taaaactcac atctaaaata
    16201 taagattttt ctacttttaa agccttgcaa atttgcttaa aacattctct ttctttctct
    16261 tgagtgcgtt gttcatagtc aaaatgcaaa gcgatgattt cataaccttc ttttttggct
    16321 agataagcac acaaagtact atccataccg ccacttatga tacaaagtgc ttttttactc
    16381 atttttatcc ttaaatttgc tataatttcg caattttaac gaaaattttt aaatttaaat
    16441 tgcaaaaaag gcaaaagcat gataaatata aaactcatag aacacatttt taaagccgct
    16501 tctatcagtc gttggaatga ttatccaaga atggcaaatt tagtggaact tgacaaacaa
    16561 gctcataaat tcatcatcgc atattttatc gctaaaatgg aaaaagatgt agatatgaga
    16621 gtgattatag aagggggaat ttttgagttt ttaagtcgtg tggtagtaac agatatacgc
    16681 cctgatgtgt atcatgaaat cgtgcgtcaa aaaaaagctg aagttaatgc ttgggtttta
    16741 agcaaaatcg aacctatgat agaagatata gaagaaggag agtttttaaa gcgttttgaa
    16801 gcgtatttaa acggcaatgc ttatgctaaa gaaaggctta tcttaaaagc agcttcgtat
    16861 tttgctacaa gatgggaatt taacatagtt tatcaaacct cagctttttt aaacgatatt
    16921 gatgagatta aaaacaaagt tgaagaagag ttagaggatt actatgagct tataggagct
    16981 agaaaaatcg ctttaaatca aaaaatagca aaaattattg atcttagcgg aagacttcgc
    17041 tttcaaaagc gttgggctca aactccacgc ataccagaaa ctgcggtttt aggacatatg
    17101 cttgtggtgg cgattttagg atatttttac tcactaaaaa tcaaggcttg tgataaaaga
    17161 cttgagaata atttttattg tgctttgttt catgatttgc cagagtcttt aacgcgtgat
    17221 attatcagcc ctgtaaaata tggcattgat ggacttcatg atattataaa tgattatgaa
    17281 atgaaactga tcaatgaaag aattttaccc tttgtgcctg agggtttaag ggctgagttt
    17341 tcttatattt taggcattag agaaggtaga aacgatgagt caaattttgt aaaaaatgag
    17401 tttgaaaatc gcacttataa aaatgctaaa atagagcttt gtagcggaag tttaagttct
    17461 tttaatgaaa atgaatttgg tgctatagat ggtaaggcgc ttaaatactg cgataaaatc
    17521 gccgcttata tagaagcaga acttagtata agctatggtg taaagtctaa agaacttgaa
    17581 agtggttttt taggaatgta tgagtttttt aaagaaaatc ctactataga tggggtgaat
    17641 ttttttgaaa tttgtgaaag tttaagagag tattttaaaa tttaaataag atttttatac
    17701 tcctattttc aatatgtttt aaataaaaat attataaatt caaattttat tttgtataaa
    17761 acataaagga gttattatga aaaaatactt tcaaaagcgc tatactttag ccttttttat
    17821 aggtatatta gcgggtattt tcggagctat tgttaaatgg ggttgggaag taccttttcc
    17881 tccaagaaat cccaatgttt tttggccagc agatgcttta gaacgtgtta ctccacctaa
    17941 aatttttcta gaacaactag gcttacctac tgattggact tatatgtttt caggtatgca
    18001 aatgcctttg tcaattttta tagtacatgt cagtttttct attgtttttg gagtggctta
    18061 ttgtatgata gcagaaaaat ggcaccgtat tactatgtgg caaggtgcag tttttggatt
    18121 ttttgtttat ctttttgccc atgttattgt aatgccttta attgcagaag ttccaccact
    18181 ttctgaaatt ccttttgatg aacacctgtc tgaaattttt ggccatattg tttggctgtg
    18241 gggtatggaa atagttcgta gagatataag aaatcgtata actaaagaaa tagaagaatg
    18301 aaaggtttcc tttcattcca tatccaaaac cgcaccttta ctagcattgc taacaagttt
    18361 ttgatacatt ctaagccatc ttgaaggcac ttctttttga ggcaatacaa attctttttt
    18421 gcgttgagtg atttcttctt cgcttaaatt tgcatggatg gtataagcat ctacatcaat
    18481 ttctatttca tctccatctt ttaaaagtcc tataagacca ccttcagctg cttcagggga
    18541 aatatgaccc acgcttaaac cccttgtagc cccgctaaaa cgaccatcag tgattaaagc
    18601 cacatcagca cccaaaccca tacccattaa aagtgaagta gggcttaaca tttcttgcat
    18661 accaggaccc ccttttggac cttcatagcg tattacacaa acatttcctt tttgtacctt
    18721 gcctttgatg atgcctttta tagcttcatc ttgagagtta aaacaaacag ctttgccttt
    18781 aaattttctt tctccgatta ttcctgcggt ttttataaca caaccttgct cagctaaatt
    18841 tccaaacaaa atagcaagcc cacctacttt tgagtaagca ttatctactt tacgaatgat
    18901 attttcatct ttgattttgg cattttttaa gcgttctttg agactttctc ctgtgatagt
    18961 cagtgcatca agttctaaaa tatgtccttg tctgcttgaa atttcagcca taactgcact
    19021 cacaccacct gctttgtgga catcatccat ataaacacta tttagcgatg gggctatttt
    19081 tgctatgtgt gcaactttac ttgagatgaa atttaaatct ttaatatcta gtgccacccc
    19141 tgcttcacgc gaaatggcaa gcatgtgtaa aacagtattg ctacttccac ccattgccat
    19201 atctactacc atggcattac gcacggcttt ttgagtgatg atattgcgaa ttttaaaacg
    19261 ctcatctaag gcgatttcac aaatacgacg cgctgctttt cttaaaagct cttctctttc
    19321 tttgcttaag gctaagatgg ttccattacc ttctagtgct atacccatag cttcgcacaa
    19381 ggtattcatg gaatttgctg taaacattcc cgagcaagat ccaccacttg gacaggctga
    19441 acattctata tctttaaatt cttcttcgct aatttttttg gcttcataag cccctacagc
    19501 ttcaaaaaca gagctaaggc tgatcttttc tccttttttg gttactcctg aagccatagg
    19561 cccaccactt acaaaaatgg ttggaacatt gacccttaaa gctcccatta acataccagg
    19621 agtgatttta tcgcagtttg gaatacagat taaagcatca agttgatgag cattcatcac
    19681 tgtttcaatg gaatttgcga tgatttcacg acttggtaaa gaataaagca taccttcatg
    19741 ccccatagct ataccatcat ctacacctat ggtattaaac tcaaaaggca cacaaccatt
    19801 tttgcgtatc tcatctttaa tgattttagc ataatcattt aaaaaataat gccctgggat
    19861 tatgtctata tagctatttg ctacacctat aaaaggtttg ttaaaatctt catctttcaa
    19921 accacaagca cgaagtaaag aacgattagg tgcttttaaa tgtccttttt ttatcgcatc
    19981 gcttctcatt gtaactcctg ataataattt tttaaaatta tatttagcaa agcttaattt
    20041 ttgtgaaatt tattttgata tacattttca taaataataa aaattattaa ttgacaaaaa
    20101 tattttttta taatacaatg ctttttgata atcaaaaaag gagtcaaaat gagacaatat
    20161 gaaacctata aatgccaaaa atgtggcaat gaagtagaag ttcaaaatgt aggcggtggt
    20221 aaacttagtt gttgtggtga agaaatgaaa tgtatcacta cagatttaac tgcagtaaat
    20281 ttgatgaaag cttttgcagg cgaatctatg gcaagaaaca aatacgattt gtttgctgat
    20341 gtagccgaag aagaaggttg gcacgcggtt gctagacatt ttagagaagc agctgaaaat
    20401 gaaaaatggc atgcaagagc agaatttaaa gcatatcatg aaatcgttga tggcaaacct
    20461 ttagaagtaa ctacaaaaaa cctagtaagt gccgcagaag gcgaaaacta tgagcacaca
    20521 actatgtatc caaattttgc aaaaatcgct gaagatgaag gcaaaaaggc tatagcaaga
    20581 ttatttacag ctattggtaa agtagaaatc gaacacgaaa gagaatatct agcgcttaaa
    20641 aaaatgcttg aagaagaaga attttttaat agcgaagtag aagaattatg ggtttgtgaa
    20701 gtatgcggac atatacatcg tggcaaaaaa gctccagcag cctgtccttt atgtaaagca
    20761 ccaaaagagt attttaaacg cgaatttttg ggttaagtta agaaattctt atccttttta
    20821 agataatatt ataattattt tttaataaaa ggataagaaa atgaaaaaat tactattttt
    20881 attttttgct ttaacggctt ttctctttgg tgctgtaaat atcaacactg caacgctaaa
    20941 agaattaaaa agtttaaatg gtattggcga agctaaggct aaatcgattt tagaataccg
    21001 caaagaagca aattttacaa gtattgatga tcttaaaaaa gttaaaggca taggtgataa
    21061 gctttttgaa aaaatcaaaa atgatatcac agtagaataa aagggcattt ttgcccttct
    21121 ttttagaaaa atttgaaaac tttatttgac acaaaagaac ttttaaacga atttgatata
    21181 aatttaatcg gtattgatga agcaggacgc ggtgctttag caggtcctat gatgatggcg
    21241 gcttgtaaac tgaacaaaaa acttgatggg ttgtgcgatt ctaaaaaact aagcgaaaaa
    21301 aaacgcgaag aactttatga aatcatcatc aaaaattcaa attatctcat acttgctttt
    21361 tcttcagaac aaatcgatgc actaggctta agcacttgtt taaaaacagg cttaaagctt
    21421 ataaaaaagc attttaaaac agaaaataac ttcttatatg atggaaacac caacctaggt
    21481 ataaacggga taaaaacaca aatcaaagcc gatgctagca ttttgcaagt aagtgcagct
    21541 agcatacttg caaaagttag taaagatagg gtgatgaatt tcttagctaa agactttcct
    21601 tgttatgaat ttgaaaaaaa caaagcctat ggcacaaaag ctcataaaga acttatagct
    21661 aaatttggaa tttgcaaact ccaccgaaaa agttttaaac ttttatgatt attttgctaa
    21721 attttgatgc aaactcaaag cacattctat accatctttt atagcccaaa caactaaaga
    21781 ttgtcctttt ctagcatctc cacaagcaaa gattttttta tgagtggttt ggaaattttc
    21841 tgtgcttatg ttgtttttct catctaattt cactccaaaa tttttagcga tagcttcttc
    21901 gcacccgcta aaacccatag ctaaaagtac taaatccgct ttataagttt ttttagaatt
    21961 tggaatttca acatttatag ctttgccttc tttaaactcg cgttttaaat catttgcttc
    22021 aacaccttct acatgagttt ttcctaaaaa tttctttgtc attttttgat attccctagg
    22081 atctttgcca tatacagcaa tggcttcttc taaaccataa tcagtagtaa aaatgtcagc
    22141 ttttaaaggc caaggattgt tttggcttct ttgcaaaggt ctttttggac ttctttcaaa
    22201 acgcactata gatttagccc cttgtcttgt cgccacagca atacaatcca cacttgtatc
    22261 cccacttcct ataactaaga catttttacc tttggccgta tctgcaccct tgcctgtttt
    22321 taacaaagtt ttggtatttt gcgttaaaaa atcaagggca aattcaaccc cttttagctt
    22381 tctaccttct atatcaagat ctataggctt acttgctcct gtacaaagca ccaaagcatc
    22441 aaattctttt agaagttttg aaaccttatc tttgctgtct atattttcat tcactttaaa
    22501 ttcaatccca ctttttttaa gcaaatccac ccgtctttga actatacttt tatcaagctt
    22561 catatcaggg atgccataca tcaaaagtcc gcctatttta tcgcttcttt caaaaacact
    22621 tactttataa cctagtgaat ttaaagtgtt agcacaagca agcccagcag gcccacttcc
    22681 tatgatagcg atttttttgc cattgtattg cttaggttta tttactctta ctaaattttc
    22741 cttaaaagca ttttctataa tggataattc attatttttt atactcacac taacaccatt
    22801 tatcgcacac acacaagaat cctcacaagg agcagggcaa acacgaccgg taaattcagg
    22861 aaaaggattg gtaagatcaa gtctttcata agcttcttcc cataaagaac gataaataag
    22921 atcgttccat tcaggaatga gattgtttaa aggacagccc acatcttttc cttcgctcat
    22981 cacacccgta tgacaaaagg ctaccccaca atccatacat cgtccacctt gaatttcttg
    23041 ttctttttta tccaaaggta tagtaaattc tttgaaattt aaaacccttt ccttaggagc
    23101 aattttttta aaatccattc ttttaaagtc taaaaaacct cttgcatttc ccatttttta
    23161 ctccttattt ttgtgtgatt ttcaaaaatg ctgctaaatt tggatctttt tcatttttac
    23221 aaagatcaag catttttaac atcttttcat aatctcttgg catgacttta aaaaagtctt
    23281 ttttatcgaa tttttctaaa atatctttag cctttttaga atctgtataa gcgatatgtt
    23341 tttctatcac ggcttttaat tctttttcat ccttagcatt aagatcttta atatccacaa
    23401 gctcggtatt tacatgagct tcattgtgtc ttccaaagat ataaacaacg cccccactca
    23461 taccagcagc gaaattcgca cccacatctc caagaactac aacttgccca cctgtcatat
    23521 attcacagcc atgcacacct gttcctaaaa ccacagctaa agcccctgaa tttcttacac
    23581 aaaatctttc ccctgctata ccatctaaat acacttcacc ttttgtagct ccgtataaac
    23641 aagcatttcc tgcgatgata ttttcttcag gtgaaaaagt ggcttcattt gaaatttttg
    23701 ctatgatttt accaccactt aaacccttgc ctaaataatc attgctatca cctataatct
    23761 caagtttaat accctttaac aaaaacgctc caaagctatt gcctgcattg cctatagctt
    23821 tgatatggat actatcttca tctaaagcgt cttttccata agtttttaaa atttcacttg
    23881 aaagcatagt cgcaaaagta cggctttgat ttcctacttc taaagaaagt ttgataggtt
    23941 cttttttctc cacagcattt ttacaaagtg gaagtaaaat tctataatca atcgtttttt
    24001 caagcttgtt atctttatag tctttaaaat gcacagcggt tctattataa gtaggcaagg
    24061 attttaaaat tttatccaaa tttagctttc ctgctttacc ttgcacactt ttttgacgga
    24121 gtttatccac gcgacctatc atatcatcta ggcgttcaaa accaagtctt gccatgtatt
    24181 ctctaagctc ctcagctata aaatacatga aattaatcac atcatctact ttgcccttaa
    24241 aacgatctct aagttctgta tcttgagtag ctataccaaa aggacaggta tttagatgac
    24301 aaactctcat catcgtacaa cctaaaacaa tcaaaggcgc ggttgcaaaa ccaaattctt
    24361 cagctcctaa aagtgccgct atggctaaat cacgcccatt cataagcttt ccatcagttt
    24421 ctaatcttac cctatctcta agcttattta aaatcaaagt ttgatgtgtt tcagccaaac
    24481 ctaactccca aggaattccc gcatgcggta tagaagttct aggacttgca cctgtacctc
    24541 catcataacc tgaaacaagg attaaattcg ctcctgcctt agccacacct gcagcaaccg
    24601 ttcctatgcc attttcgctt acaagtttta ctgaaatttt agcgtctttg ttagcatttt
    24661 ttaggtcata aataagttga gccaaatctt ctatagaata aatatcatga tgaggaggtg
    24721 gggaaataag cgtcacacct gcagtagaat gtctagcctt agctatccaa ggatagactt
    24781 taaagcccat taattgtccg ccttcacctg gttttgcgcc ttgagcgact ttgatttgaa
    24841 tttcttttgc atgacttaag tagtttagat ccacgccaaa acgcccactt gctacttgct
    24901 taatggctga gtttttatcc acaccctctt tgatttcata gcgttcttca tcctcgccac
    24961 cttcacctga atttgattta gcacctattt tattcatagc ctgtgccaaa cactcgtgtg
    25021 cttctttaga aatagaacca taactcatcg cccctgttct aaagcgttta actatacttt
    25081 ctacactttc aaccttatct atactgatag cttcactaaa atcaaattcc atcaaagaac
    25141 gcaaattaac ttgtttttca tctactaaag ccgagtattt tttaaagctt ttatagtctt
    25201 tgttgcgaca ggcttgctga agattaaaaa tcacaagtgg atcaattaaa tgttcttctt
    25261 tagcacttct aaaaccatga attcctttag aatctaaagc cttatgcgta tcgttaaaag
    25321 catgtttgtg taaagcaata agttcttttt caaaatcttc taaatccata ccttcgatgc
    25381 gtgaagttgt agaagtgaag tatttatcaa tcaccttaga gcttaagccc agacattcaa
    25441 aaagtgcaga gccattataa ctttgcaagg tagaaactcc cattttagaa gcaattttga
    25501 ctatgccact tgaacttgcc ttgatgaaat tttctaccgc cttttcataa cttaaattta
    25561 aatctttatt ggcaatgagt ttttgtatgc tctcataaac caaataagga ttaataacag
    25621 tcgcaccata acctaaaaga catgcaaaat gatgaatttc tctaggttca ccactttcga
    25681 tgataagact tgtatgtgtt cttaaatttt ttcttactag atgattatgc actccagaaa
    25741 cagcaagcaa agcagggata taagcgtttt tttcatccac tcctttatcg cttaaaatga
    25801 taatagaaac acctttttta acctcatctt ctatcttaac gcaaagttca tctaaagcct
    25861 tttctaaagt ttttttagaa taatcataaa gtatagaaaa ttctttaact tgaaatttat
    25921 ttaaagcctt aacttcaaaa agttcttcat tgcttatcac aggcaaagct atttttacgc
    25981 gttttgcatt gttttcatcg ggttttaata aattgccttc gcttcctaga taaatccttg
    26041 tagaagtaac gatctcttct cttatggcat caagaggagg attagttact tgtgcaaaaa
    26101 gttgtttaaa ataattatac aaaggttgat aagttttaga aagtatagcc aaaggagtat
    26161 ctacacccat agctgctata gcttctttac cattttgagc catagcagcc acactcattt
    26221 taagctcatc ataactccaa ccaaaagctt tttggagttt taaaacctca tcttctttta
    26281 aaaactgatg tttataaact ccgctttttt gtttttcaag ttcaactaaa tttttaagcc
    26341 attttttata aggcttagca ttagcataat gctctttgat ttcattatca gctataaccc
    26401 tacctcttgc tgtatcaacg agtaaaagtt ttccaggttc taagcgtttt ttggctttga
    26461 tatttttttc atcaagtttt aaagcccctg tttcacttga aagtatgagc atatcatctt
    26521 ttgtaagata ataccttgaa ggacgaaaac catttctatc caaactcgcc cccataatca
    26581 ctccatcagt aaaaactata gcagcaggcc catcccaagg ctccatcaat aaagaatgat
    26641 attcataaaa agcacgcttt ttgctttcca tattttcatt tttatgccaa ggttctggca
    26701 ccatcatcat aaaagcttct tctaaagtac gaccatttag agctaaaaat tctaaagtat
    26761 tatcaaacat tgcagaatca ctgctaggct tagctatgat aggaaaaatt tcatctaaat
    26821 tttcaaaata ctcactttgc atcaagcctt ctctagctct tatgctatca acatttccgc
    26881 gtatggtatt aatctctcca ttatgcacca tataacggtt tggatgggct ctttcccaac
    26941 ttgggaaggt attagtcgaa aagcgagaat gcaccaaagc gatggctgat ttcatattga
    27001 catctttaaa atcaagataa aaatcgctca attgagttga aagaagcatt cctttataaa
    27061 ctatggtgcg tgaagaaaaa cttgaaaaat aaaattttgg cacattaata gctctttttt
    27121 ctataaggcg acgcgtacta taaagcactc tttcaaactc aagtcctgca cttattttac
    27181 ttggtttttt cacaaaggct tgtaaaaaat aaggcatagc ttttaaagca cttgcaccta
    27241 tatcgctagg attaaaaggc acttctctaa aacctaaaaa ttcaagtttt ttatccttta
    27301 aaccttgtaa aaatatctct tttgcttctt cttttgcatc agtattgggt gataaaaaca
    27361 tctgtgctac ggcataatca ccctttttag gaagttcaaa acccaattct tgagttttaa
    27421 aaaaatcatg tggaatttgg atcaaaatcc ccgccccatc acctgaattt tcttcagctc
    27481 ctgcaccacc tcggtgttca agattcatca aaatttctaa agcatcacaa ataaccttat
    27541 aagaggcaat accgcgtata ttagcaactg cagcgatacc acaggcatcg tgttcgttct
    27601 ttgggtgata taaacctatg ctttgattat tttctaggat attttctaaa tccattttgc
    27661 tctccttaat aagactgatt taaattttgt tagctttata aggattatag catacatttt
    27721 tttaaaatcg atataatttt tatcttaaaa ataaataaat taaaaaatat tttgatagat
    27781 ttgtaaaaat tataaaaaca tggcgataat actacctaaa atcaataatg ggccattata
    27841 gaaaataaaa gttggtatgc aagtatcttt aatgtgatcg tgttgtttat cagcatttaa
    27901 tcctacagta gttcccatgg ttgtttcact agctggactt cctgcatctc ctaaagctcc
    27961 tgctactcct aagataaata taataagtgc tgtactaaaa ccaagttcca aacaaatagg
    28021 acaaaaaagc gtagctatga taggtatagt tccaaaagaa gtacctatac ccatagtgat
    28081 gataagtcct attaaaagca tgaaaaatac tgctaaaaat ttactttgct ccatccaagg
    28141 aacgactgaa tttacaagat ctactactga tccactttct tttaaaactt ctccatatcc
    28201 tgcagcaaca aggataacaa aagctataaa acccatcatt ttaagcccat catcaaaaac
    28261 ttcattgact tttgaaaatt caactccacc caaaataacc attaaaacaa aacccaaaag
    28321 ccctgataaa ggcaaattca tagtcaaaat ttgcaaaatt aaagttaaaa caagcccagc
    28381 taaaacgccc cattccttac gcgtcatttc aagattttct aaatccactt tagcaatttc
    28441 tacttcttga tactctcttg gcttacgata aaacacaaaa agcgctagaa aaagtcctgc
    28501 tatcatacaa atagcagcaa aatacatagt atttgtaaca tcatttaaag atacacttac
    28561 attatttgca tttaaattat cttttaaaag atcttgaaaa gtaagcccaa aacctactgg
    28621 caaaaccata taaggcgtag taaggccaaa agttaaagca caagcaaccg ctctacgatc
    28681 aattttaagt ttattaaaaa gacttaaaag aggtggaatc aacaaaggta taaaagctac
    28741 atgaatagga attaaatttt gagaaaaaca agaaatcaaa gctatagaca aaagcaataa
    28801 atatttttta tgagatataa aatgacttac tatcttgatc aaatatgcag ttaaatttgt
    28861 ctttgaaatc gctgcagcaa tggctcctaa gagtatatag ctaagagctg tttttaaatt
    28921 ttctttcatt ccgcttataa gtatattcat agtatctacg agttcaagat gagaaaatac
    28981 acctgcaaca agagctgaga tcaaaagact caaaagcaca ttaaaacgaa acaaacaaag
    29041 taaagtcatc aaaacaacac tgataatgat aggattagta agtaaagtca aaatcattcc
    29101 ttaaataatt ttaaaaattt aattgtagaa a
//
LOCUS       DARBAC010000004        27037 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.004, whole genome shotgun sequence.
ACCESSION   DARBAC010000004 DARBAC010000000
VERSION     DARBAC010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27037
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.004"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(201..1205)
                     /gene="mnmH"
                     /locus_tag="SB799_000125"
     CDS             complement(201..1205)
                     /gene="mnmH"
                     /locus_tag="SB799_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HEG0867401.1"
                     /translation="MLSEVEFAEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKARGASYICQNTAKHILKITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFTLCGNTGCGKTELLEQLPQ
                     AINLEKIANHLGSSFGDILGKQPTQKAFEAELFHNMQNLENFAFIESESRKIGDIILP
                     LKFYEKMQKAFKIYCFCSLENRVKRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQRLITMLLEYYDKTYKKPDKIDLELNTDDILKAKEEILRYFKLKNYILI
                     "
     gene            complement(1195..1680)
                     /locus_tag="SB799_000126"
     CDS             complement(1195..1680)
                     /locus_tag="SB799_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEG0867402.1"
                     /translation="MQYLYAPWRSEYFEKEKSICPFCDCANKIKSDEDLGVIFRAKHC
                     FGVMNRYPYSVGHFMVIPYVHEEHIENLSDEIWQEMSHFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAPHCHYHLVPRWAGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            complement(1690..2466)
                     /gene="trpC"
                     /locus_tag="SB799_000127"
     CDS             complement(1690..2466)
                     /gene="trpC"
                     /locus_tag="SB799_000127"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEG0867403.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            complement(2463..3740)
                     /locus_tag="SB799_000128"
     CDS             complement(2463..3740)
                     /locus_tag="SB799_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HEG0867404.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLTLANNLDKQAELNNLAKPYLNQN
                     DNLKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFALALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCRQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACVKP"
     gene            complement(3713..4087)
                     /locus_tag="SB799_000129"
     CDS             complement(3713..4087)
                     /locus_tag="SB799_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEG0867405.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEALRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVEFEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLF"
     gene            complement(4077..4778)
                     /locus_tag="SB799_000130"
     CDS             complement(4077..4778)
                     /locus_tag="SB799_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEG0867406.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNQIQGDIFHDDFNQFQSIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLTKANSMLKPNGTLYFCYEALALDE
                     ICFILKDIKIKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            complement(4784..4933)
                     /locus_tag="SB799_000131"
     CDS             complement(4784..4933)
                     /locus_tag="SB799_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867407.1"
                     /translation="MIKIAFFITFVISFLTAQSPVNFKEDNNITKEQNIFKEQPPKRI
                     KIPTH"
     gene            complement(4951..5027)
                     /locus_tag="SB799_000132"
     tRNA            complement(4951..5027)
                     /locus_tag="SB799_000132"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4991..4993),aa:Arg,seq:cct)
     gene            complement(5056..7131)
                     /gene="fusA"
                     /locus_tag="SB799_000133"
     CDS             complement(5056..7131)
                     /gene="fusA"
                     /locus_tag="SB799_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEG0867408.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            complement(7144..7614)
                     /gene="rpsG"
                     /locus_tag="SB799_000134"
     CDS             complement(7144..7614)
                     /gene="rpsG"
                     /locus_tag="SB799_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEG0867409.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(7684..8070)
                     /locus_tag="SB799_000135"
     CDS             complement(7684..8070)
                     /locus_tag="SB799_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEG0867410.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGTAK"
     gene            complement(8190..12743)
                     /gene="rpoC"
                     /locus_tag="SB799_000136"
     CDS             complement(8190..12743)
                     /gene="rpoC"
                     /locus_tag="SB799_000136"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEG0867411.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANADSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIIKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAILLVEPKIKTPFKGVINIENIHEDVIVSIKNKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYQLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(12736..16872)
                     /gene="rpoB"
                     /locus_tag="SB799_000137"
     CDS             complement(12736..16872)
                     /gene="rpoB"
                     /locus_tag="SB799_000137"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEG0867412.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKAPLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLIGLRLGDQIQEIFDRKQKDFLKELRAKMLEICSIPRLASEKEFIKSLSDEELLNYA
                     RDWSKGVKFATPVFEGVNIEEFSKLFEMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(16981..17358)
                     /gene="rplL"
                     /locus_tag="SB799_000138"
     CDS             complement(16981..17358)
                     /gene="rplL"
                     /locus_tag="SB799_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEG0867413.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     AAGGAAAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(17379..17858)
                     /locus_tag="SB799_000139"
     CDS             complement(17379..17858)
                     /locus_tag="SB799_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEG0867414.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAYIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(18010..18711)
                     /locus_tag="SB799_000140"
     CDS             complement(18010..18711)
                     /locus_tag="SB799_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEG0867415.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(18766..19191)
                     /gene="rplK"
                     /locus_tag="SB799_000141"
     CDS             complement(18766..19191)
                     /gene="rplK"
                     /locus_tag="SB799_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEG0867416.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(19217..19750)
                     /gene="nusG"
                     /locus_tag="SB799_000142"
     CDS             complement(19217..19750)
                     /gene="nusG"
                     /locus_tag="SB799_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEG0867417.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(19760..19939)
                     /gene="secE"
                     /locus_tag="SB799_000143"
     CDS             complement(19760..19939)
                     /gene="secE"
                     /locus_tag="SB799_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEG0867418.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(19958..20033)
                     /locus_tag="SB799_000144"
     tRNA            complement(19958..20033)
                     /locus_tag="SB799_000144"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19998..20000),aa:Trp,seq:cca)
     gene            complement(20046..20204)
                     /gene="rpmG"
                     /locus_tag="SB799_000145"
     CDS             complement(20046..20204)
                     /gene="rpmG"
                     /locus_tag="SB799_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEG0867419.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(20257..21456)
                     /gene="tuf"
                     /locus_tag="SB799_000146"
     CDS             complement(20257..21456)
                     /gene="tuf"
                     /locus_tag="SB799_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEG0867420.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(21525..21599)
                     /locus_tag="SB799_000147"
     tRNA            complement(21525..21599)
                     /locus_tag="SB799_000147"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21565..21567),aa:Thr,seq:ggt)
     gene            complement(21704..21780)
                     /locus_tag="SB799_000148"
     tRNA            complement(21704..21780)
                     /locus_tag="SB799_000148"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21744..21746),aa:Gly,seq:tcc)
     gene            complement(21787..21872)
                     /locus_tag="SB799_000149"
     tRNA            complement(21787..21872)
                     /locus_tag="SB799_000149"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21836..21838),aa:Tyr,seq:gta)
     gene            complement(21922..21997)
                     /locus_tag="SB799_000150"
     tRNA            complement(21922..21997)
                     /locus_tag="SB799_000150"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21962..21964),aa:Thr,seq:tgt)
     gene            complement(22112..22849)
                     /locus_tag="SB799_000151"
     CDS             complement(22112..22849)
                     /locus_tag="SB799_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0867421.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFENPKSERAKKFLNLFDYHK"
     gene            complement(22851..23507)
                     /locus_tag="SB799_000152"
     CDS             complement(22851..23507)
                     /locus_tag="SB799_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0867422.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLSSVSAAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(23500..24201)
                     /locus_tag="SB799_000153"
     CDS             complement(23500..24201)
                     /locus_tag="SB799_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0867423.1"
                     /translation="MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLHA"
     gene            complement(24218..24814)
                     /gene="nssR"
                     /locus_tag="SB799_000154"
     CDS             complement(24218..24814)
                     /gene="nssR"
                     /locus_tag="SB799_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HEG0867424.1"
                     /translation="MKDYLELLSSVGKLKKIQKNSILFYEGEEAKKFFILLKGKIRIY
                     KSTASDKEITLHYFNPPNFIAEMPAFKKLNYPANAIFEEDGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
     gene            24909..25292
                     /gene="ctb"
                     /locus_tag="SB799_000155"
     CDS             24909..25292
                     /gene="ctb"
                     /locus_tag="SB799_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HEG0867425.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEVWLGLFEESLNMVYNEEM
                     KAVILQRAQMIASHFQNMLYKYGGH"
     gene            complement(25289..>27037)
                     /gene="recG"
                     /locus_tag="SB799_000156"
     CDS             complement(25289..>27037)
                     /gene="recG"
                     /locus_tag="SB799_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEG0867426.1"
                     /translation="LPKKIENLNPSKNPKENEICTQKITIKSVSSRKNQLFGLGFCEE
                     WQENISFVFFHPRAWHFGVCKVGKELIFNAKLSRFNHTWQFNNPKILTSFEGFSPKYQ
                     ILGLKDTKIAAFIHKYLNYENLKESGIEDKYIHFLLNLHAYDEKSFFMFENLQNFSKD
                     LKYIEIYNFLKRLKAKQTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKDLHS
                     KEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILAYQLYEEAKKFLPDFMN
                     ILFIKGGKKEKDLEQNIQKANLIIGTHALIHLESHNAVLVMIDEQHRFGSAQREKIHS
                     LNKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPFKKDITTYCIQNEGFSKLS
                     EKIKEEISKNHQIIIIYPLVSASDNIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEI
                     LERFRDEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATLHQLRGRVGRVGLKSTC
                     YLYTKLKEIPSRLKEFASTLDGFKIAELDLKNRLSGDLLDGFMQHGNEFKFFDFSKDE
                     EILEKVKKDLAKKLPN"
BASE COUNT         8583 a         5296 c         3587 g         9571 t
ORIGIN      
        1 gccctaaata aaatgattta tgtaataaat attactttta tataaaaatt tagggtaaat
       61 gaaaaaacaa tatctaaaag cctaatttac aatactttga gaaattaaaa aataacaatt
      121 tcaaaaataa aaaagaaatt tgtgattttt ttattttttt aaagaaaata gtataatttt
      181 tttgcaaagt gataaaaaaa ttaaattaaa atgtagtttt ttagcttaaa atatcttaaa
      241 atttcttctt tagcttttaa aatatcatca gtatttaact caagatcaat cttatctggt
      301 tttttataag ttttatcata atactccaaa agcatagtaa taagcctttg ccattctttt
      361 ctctcataac tttgaagcaa atcttggcgt aaatttaagc tgatataagg gctgattttt
      421 tgcacacatt gttgaaattt taaaggagtc attttctctt gataaatttt ttgtattctt
      481 ttaacgcgat tttccaaaga acaaaaacaa taaattttaa aagccttttg cattttttca
      541 taaaatttca aaggtaagat gatatcccct attttgcgac tttcactttc tatgaaagca
      601 aaattttcta aattttgcat attgtgaaaa agttctgctt caaaagcttt ttgcgtaggt
      661 tgttttccta aaatatcacc aaaagacgag cctaaatgat ttgctatttt ttccaaattt
      721 atagcttgtg ggagttgttc taaaagctct gtttttccac agcctgtatt gccgcaaaga
      781 gtaaaaaaat caaaatttat ttcattttca aaataatgcg ttacaaaagt tctataagct
      841 ttaaagccac cttttaaacg caccactcta aagccaagct cacttaaaat cactgcgata
      901 gactttgaac gcaaaccccc acgagaacaa taaatcccca ccttttctcc tatgcgaaaa
      961 ttttgggtga tttttaatat atgcttagcg gtattttgac aaatataact cgcaccccta
     1021 gccttggcta aagcttgatt tttcttataa atcgttccta tttcttgata ttcttcatca
     1081 ttgagtgcat aaaaatttaa agctcctatc aaatgagaat gcaaaaattc tctagggctt
     1141 cttgcatcga ttaaaagaga gaaattttct ttttgaaact ctgcaaattc aacttcactg
     1201 agcattttta aaagccaaaa caagtttttg ataaacttgc tcgatattag taccacaaac
     1261 cctagtttct cctatggttg tgataaaatt tgtatctcct gcccagcgtg gcactagatg
     1321 ataatgacaa tgaggtgcta tgccagctcc tgcatctttg cttaaattca taccgatatt
     1381 gaccccattt gcatgaattt gctcttttaa aattttcact cccaaacgca caaaatggct
     1441 catttcttgc caaatttcat cgcttaaatt ttctatatgc tcttcatgta cataaggaat
     1501 caccataaaa tgccccacag aataaggata gcggttcatc actccaaaac aatgctttgc
     1561 tctaaaaatt acgcctaaat cttcatcgct tttgatctta ttagcacaat cacaaaatgg
     1621 acaaatgctt ttttcttttt caaaatactc actccgccat ggtgcataca aatactgcat
     1681 tttccctcct taaagcaaag cttttaaagc ctttccttca tctttttcgc gcataaaata
     1741 ttcgccgatt aaaaaagcat caacgcctaa attttgcaaa tgctctaaaa attctttatt
     1801 ttctaaacca ctttctgcga tgatgatttt tgaatttggg atttgtggga taagtttttc
     1861 gcacaaactc atatccatag taaaatcctc taaattacga tgattgatac cgataatatc
     1921 cgctccagca aaaatagcct tactcaaatc ctctttatca tgaatttcaa ccaaagcctc
     1981 aagacctaaa tgtcttgcaa actcaagcag ttttttaagc tctttcatgc ttagcatttt
     2041 agcgattaac aatacaaagt ctgccccata aaccaaagct tctaaaattt gatactcatc
     2101 aaagataaaa tcttttctaa gtaaaggaat ttgtgtataa cggcgtataa gacttaagta
     2161 ttctaaagaa cctttaaaaa aatgtggctc agtcaaaaca gaaatcgccg cagctttgtt
     2221 cttctcataa tttaaagcaa tactcaaagg atcaaagtct tctctaatga ctcccttgct
     2281 agggcttgct ttttttactt ctgctatgat tttaacttct ttttctactc tttttaaagc
     2341 tttaatcaca tcttttggaa agaaaggatt tgaagctaaa gaacgcccta acatatcata
     2401 aggaagtttt agtttgcgtt cttttaaatc ttcttttgtt ttttcaaaaa ttttatccaa
     2461 tatcatggtt ttacacacgc ctttatcgct tttatatgag ctttactctc atcagaattt
     2521 gcaaattctt tatcatctaa tgtttgtttt aaaatttccc atgcttgcct acaatcgcct
     2581 agtttataat acccccaagc taaagaatct aaataataca aattctgcgg atctttttct
     2641 aaggcaagtt tcacaagctc tatacctttt ttaacatcta aatcataatc tataagcaaa
     2701 tatccatagt agtttaaata caaagcattg ctatctttat cgatagcttg ttcgaatttt
     2761 tcttttacag aatcaattac tttcggagtg atttttttag cttcatttgc agcttcaaat
     2821 tcaaaaactg ccgctcgtag aagatattct ttattttttg ttttatgata aagagctaaa
     2881 ctcatttttt tagcatcatc aaagcgtttt aaattctgat acaaagcgag tttaatatca
     2941 tcatctaaat catactgcaa agaaattttt aaagcttctt ctgttttgcc ttgagaattt
     3001 aaaagctcaa ccaaagccaa tgcaaaactt ttatttttgg taagttgata aagctcttta
     3061 tatatacttt ttaaagcttc gatatttttt tcatcaaaat aaattttagc aagcaagacg
     3121 caagttttga gagtgcaacc attggttttt cttgaaaatt ctaaaacatt tttaatattt
     3181 aaagtatcat ttaaaatcgc ataaattcct atgagtttaa ataaaatttc ttcattttgc
     3241 acttgattat aagcagatct atagtatttt gtagcatttt ttaaatcatt ttttttaacc
     3301 aaaatatccc cgtaaagctc taaatttcta ggatcactat ccttttttgt taaaagctct
     3361 ttcataagtt tttgagcatt gttgatatca tttgaattta aagcataaag agcactaagt
     3421 cgcttaagat tgtcattttg atttaaataa ggctttgcta gattatttaa ctctgcttgc
     3481 ttgtcaagat tgtttgctaa agtaagtaaa aatgcatttt ctaaaaaatt agtattatta
     3541 taatcttgat aaagacttaa aaattcatct ctggcttctt tgtattgttt ataatactca
     3601 taattataag ccttcataac ccttaaatca aaatcattgc ttttatattt tgtataatca
     3661 ggataaacaa cattgatttt tgaacttcca caagctgcca aaaaaaaggc tgctaaaaca
     3721 aataacaaat acctatacat tctttttcta attccttttg atgtgtttta aaatattccc
     3781 aaaatggaaa agttctgcat tgttttggac gaaaatcgta gatactgcaa tttctttttt
     3841 gagtatcaaa aaaaatgcaa gcaaagccat cttcaaattc gacttcctta aaactcattt
     3901 taaagcccac ttttctcaag tatttttcag caaattcttt gctttctaaa tttaaatgct
     3961 ttcttaatgc ttctaattct tctttgcttg caaaaatatt gccactttct ccagtgcaac
     4021 actttccacc gcatttctca caagcatttt catcaaaagc ataagaaaaa tttttatcaa
     4081 atatcataac tttttaacct aaatcttaag tgaatttctt gcatttgttt gcttaaaatt
     4141 tcattttcat atacaaaaaa aggaggtaaa atctcacaag gcgattttga accttttttt
     4201 acctgtatca aaacaagtct tgcttttttg ttttgatgtg tatgtacaaa gcaaagcttt
     4261 gttattttta tttttatatc ttttaaaata aaacaaattt catctaaagc taaagcttca
     4321 tagcaaaaat acaaagtacc atttggctta agcatagaat ttgctttagt taaaaagcta
     4381 tgcaagggta aaaattcctg aaatttactt atagctttat gctgatcttc actcttgtaa
     4441 gctccttgtc tataaaatgg aggattgcaa actatgaagt caaatttttt tatgctttga
     4501 aattgattga aatcatcatg aaaaatatcg ccttgtattt ggttggattt taaatttttt
     4561 tcaatcaatt ttatattttc tttttgaata tcaatcaaag ataaacttaa atttgcaata
     4621 ttttttttaa gtaaaatacc tatgatacca cagcccgcac ctacatcaaa aacagcgcct
     4681 ttaattcctt gttttaaaat aaaatcagct aaaattaaag aatcactatt ataacgatac
     4741 ccttgtgata attgtgctag cgtaatcaaa tctgacatat attttaatgc gttggaattt
     4801 taatgcgttt tggaggttgt tctttaaata tattttgttc ttttgttata ttattatctt
     4861 ctttaaaatt tactgggctt tgtgctgtca aaaaagaaat tacaaaagtt ataaaaaaag
     4921 caatttttat cataataaca cctcataaaa tggtgtccac ggcgagattc gaactcacgg
     4981 cctcaaaatt aggaattttg cgctctatcc tgctgagcta cgaggacaga aagcgggaaa
     5041 aatcccgcta aaaatttaac cgtttctttt tttgatgatt tcatccgcaa catttttagg
     5101 aacttcatca tagtgatcaa attccataga ataagtcgca cgaccttgag tttgacttct
     5161 aagatcagta gaataaccaa acatttcagc caaaggacaa aatgctgtga tgattttatt
     5221 tccaccacgc tcatccatgc tatttacttg accacggcgt ttgttaagat ctccaataac
     5281 atcacccata taatcttcag gagtttctac ttcaactttc atcataggct ctaagatcac
     5341 agcacctgct tttctagcac cttctttaaa gcccatagaa gcagcaagtt taaatgccat
     5401 ctcagatgaa tccacctcgt gataacttcc atcataaaca gttactttaa catcttccac
     5461 aggataacct gctaaaacac cattttgtaa tgcttcttga acacctttat caactgcagg
     5521 aatgtattct tttggaatta ccccaccttt gatatcatta acaaattcat atccactacc
     5581 tggctcaagt ggttcaaggc gtaagaatac atgtccatac tgaccacgac cacctgattg
     5641 tttagcgtat ttgtattctt gttcaacagt ttttctaata gtttcgcgat aagcaacttg
     5701 tggttgacct acttcagctt caactttaaa ttcacgaagc attctatcaa cgataatttc
     5761 aaggtgtaac tcacccatac ctgaaatgat agtttgacca ctttcttcat ctgtagaaac
     5821 tctaaaactt ggatcttctt gtgctaattt atttaaagca atagacattt tttcttgatc
     5881 agctttagtt tttggctcaa ctgcaacaga aataactgga tctggaaaat ccattctttc
     5941 aaggattacc ttatcttttt cacttgcaag agtatcccct gttaaagtat ctttaagtcc
     6001 tacaacagca ccaatttcgc ctgcgtaaag cactttaatc tcttctcttt tgttagagtg
     6061 catttttaac aaacgaccaa ttctttcttt tttatcttta gttgagttat atgcataaga
     6121 accgctttct aaacaaccgc gataaacacg cacgaaagta agttgtccta caaatggatc
     6181 tgtcatgatt ttaaatgcaa gccctgcaaa ctcgccatca tcagttgatt ttacagaaac
     6241 ttctgtgcca tcttcatatt cacccttgat atttgccact tcatcaggag ctggcaaata
     6301 agccacaaca gcatcaagta aaggttgaac ccctttattt ttaaacgctg taccgcaaag
     6361 cataggaacg atagaaagac ttaaacatcc tgctttaatc cctgttttaa tctcttcaag
     6421 gcttaattct tctccgccta aatatttttc catcaactca tctgaagttt cagaaactgc
     6481 ttctatcatt tttgtgcgat attcttctgc cttttcttta agttcagctg gaatttcttt
     6541 ttctacataa tccgttggct tagtatcatc ttcccaaact aaagctttca tagttacaag
     6601 atcgattacg cctttaaaat tatcctcagc accaattgga atttgaagtg gaactggatt
     6661 agcttttaaa cggttgcgaa tttgatcttc tacattataa aaatttgcac cgattctatc
     6721 cattttattt acaaatacta ttcttggaac accgtattta tttgcttgtc tccaaactgt
     6781 ttcactttga ggctgcaccc cacccactga acaaaatacc gcaacagcac catcaagaac
     6841 acgcatagat ctttcaactt caattgtaaa atccacgtgg cctggagtgt caataagatt
     6901 gatttgatga tctttccaaa aacaagttgt agccgcagaa gtgatagtaa tcccacgctc
     6961 tttctcttgt tccatccagt ccatagttgc agcaccatca tgaacttcac cgattttatg
     7021 actcatacct gtaaagaaaa gaattctttc agatgtagtc gttttacccg catcaatgtg
     7081 agcagcaata ccgatatttc taactttttt taaaggagta cttcttgaca tacacactcc
     7141 ttcttaccaa cgatagtgag caaatgcttt atttgcttca gccattttat aagtatcttc
     7201 tttcttctta aatgaagcac ctttgctatt tgctgcatct aaaagctcag ctgcaagttt
     7261 atcaatcata gttctttcgc ttctttttct tgcaaaagaa ataatccaac gaatcgccaa
     7321 agcttgttgt ctagcaggac gaacttcaac tggaacttga taagttgcac cacctacacg
     7381 acgagatttt acttctaata aaggcttaat attttcaatc gcatcattaa aaatatcaat
     7441 accttttttc tcgccacctt ttttatcaat agcttccaaa gcaccataca taattgttgt
     7501 agctgtgctt tttttaccat catacattaa agaattaata aattttgtga ttactttatt
     7561 accataaatc ggatcaggca agacttctct taccggagct tttcttcttc tcattatttt
     7621 tccttcaaat tttaaatttt actcaaacaa aatcaaatct aacggatttg tctgtatgaa
     7681 tgattatttt gcagtgcctg ctttagggcg tttagcacca tatttagaac gagaaactgt
     7741 tctttttgca acacctgctg tatcaagagc accacgaacg atgtgatatt taacccctgg
     7801 taagtctttt accctaccac cacgcactaa aacaatgctg tgttcttgca agttatgacc
     7861 ttcaccgccg atatagctga tcacttcaaa gccactagta agtcttactt tggcaacttt
     7921 tcttaacgct gagtttggtt ttttaggtgt tgtagtataa accctagtgc aaactcccct
     7981 tctttgtgga caatttttaa gcgctggaga tttagatttt tctaaaactt ttttgcgctc
     8041 ttttctaacc aattgattta tggtaggcac aataattcct ttctttaaaa atgtaataaa
     8101 ctttggatga tatctaaatt ttgcttatat tttagttaaa aagattgaaa atgaagaaat
     8161 atagcccaga agggctataa aatagagttt tattcttgtt ctttaagttt taaattttgt
     8221 tcaccataaa gccctgttcc aacaggtatc attctaccta gaataacatt ttcttttaaa
     8281 tcttctaagt agtcaaattt acccgctata cttgcttcgg ttagaacttt agtagtttct
     8341 tggaatgaag ctgcagaaat cacactatcg cttccaatcg ctgctcttgt tacacctaaa
     8401 agcacaggct cagcaatagc aggttctcca cccattctaa tgattctttc gttttcttca
     8461 cggaatttac gtcttgaaac caaatcaccc tcgataaatt tcgtatgtcc actatctaca
     8521 acttttactt gtcttagcat ttgagaaacg ataacttcta tatgtttatc agaaatcaca
     8581 acaccttgtc cgcgataaac ttgttgaatt tcagaaatca aataataatg caaggctttt
     8641 tcacccaaaa ttttaagcac atcatgactt gaaacaactc catctgtaag tttttcacct
     8701 gcatggataa actcgccatc tcttacttga atatgttttg atttatcgat taaatactca
     8761 gcgcttgttc catcttctgc ttggataatg attctttctt tagaacgcaa aggtttatca
     8821 aaacgaacaa caccatcaat ttctgcaatc acagccgcat tttttggttt tcttgcttca
     8881 aaaagttcag aaactcttgg aagacctcct gtaatatctt ttgatttagc tgcagctttt
     8941 ggagtttttg ctaaaatatc tgcttgagcg attttatcac catcatgaac aaaaataacg
     9001 gtttttggtt caagctgata acgcacagcc ttatcacctt ttcctgcgat taccaaagtt
     9061 ggtctaactc cgcttggcaa atactcatta atcactaaag aacgcttacc tgtagcttca
     9121 tcaatttgct catcagcact ataacctgct tcaatatcct caaagcttac aacaccatca
     9181 atttctgcaa tgatagtatt attataagca tcccattctg caatcacttt tctttctttt
     9241 ttaggagcac ttgcaatgat agtatttgca tcatcgattt tttcactatc gttaaattct
     9301 atcttagatt ctcttggaat atagtgtctt tttgcttctc tatcattttc atcagcaatc
     9361 actacaaaga atcctttttc tttaacaata tcgccttttt taacattttt taccctatct
     9421 aaaccatcgc ctttaaggat ataaaattta agcgttcctt tttcgcctgc tttgatattt
     9481 tgaactacag gctcaccatc ttctactaaa atttcactcg caaaagggat acgatttggt
     9541 acattccaac cctctttaat cacttctacg atactttcat tttcttctac ttgcatacca
     9601 ctttgatatg gcaaataaag ttttccatct atactgccac ttacacctgc taattcattt
     9661 ggtttagcaa gatcgtattt tcttagtatg tattttactt cttgtttttt atttttaata
     9721 gaaacaatca catcttcatg aatattttct atattaatca cacctttaaa tggagttttg
     9781 atttttggct ccacaagtaa aattgccgca tttctacgat ttgctacgat atttttacct
     9841 tctttatttt tataagtttt aagattataa aatctgataa aaccttcttt ttgtgcgctt
     9901 acttgtctat cttgtaaatc cgtacttgca gttcccccac tgtggaaagt tcttagagtt
     9961 agctgcgttc ctggttcacc gatagattga gcggaaataa ttcctactgc ttcgcctggt
    10021 tttaccaatt taccttcacc aagattgata ccataacatt ttgcacaaat tcctttttta
    10081 gctttgcagg taataggagt gcggatattg acacttttta taccgctttc tccaagaatt
    10141 tttgcttttt cctcatccat taaagtacct tctgcaaaaa gcacagaatt tgtaatagga
    10201 tcaatcacat cttcagctaa aaccctgcct aaaattcttt cttctaaagt ttctataata
    10261 gagctatctg cggtaatttc attgatttca acaccctcat gcgttccaca atcttcaatg
    10321 gtaattttta cattttgcgc aacatcgatg agttttcttg tcaaataacc cgcatttgct
    10381 gttttaagag cggtatctgc tagacctttt ctagcaccgt gagttgaaat aaagtattca
    10441 agaacattca acccttcacg gaaattcgaa ataataggag tttcgataat agaaccatca
    10501 ggtttagtca taagtcctct catcgcagca agctgagaaa tttgagccgc actaccccta
    10561 gcaccagaat ctgccatcat ataaatagag ttaaaacctt ctttatcttt ttctacaagc
    10621 ttcatcatct cttttgaaag gacattattt gtactcttcc aaatatcgat gattttgttg
    10681 tatctttccc ctgaagtaat caaaccaaga ttataagaat tttgaatttc tcttacttgt
    10741 ttttttgctt catctatagc tttttgcttg tcattaggaa caataatatc tgcaattgaa
    10801 attgaaatac ctgctttagt tgcatactca aaacctaaat ttttgagtct atctaagaaa
    10861 cttgctgtaa tctccaaacc accttgttta taaacataat ccacaagcgc ggcaatgtct
    10921 tttttcttta agactttatt ccagctattt tcaggcacaa aatcaggtaa aatggattta
    10981 ataatcaatc ttcctgctgt agtggtaatc tttctaccat ctaccatggt ttgtatactc
    11041 gcatgaatat ctaaacactt actttcaagt gccatcatca cttcatcaat gcctgtacaa
    11101 attttatgcg aacctttagc acctgctttt tctaatgaaa gataataaat tcctaaaacc
    11161 atatcttgcg atggaacggt tacagactta ccgcttgctg gcaaaagaat attcattgat
    11221 gaaagcataa gcactttaca ttctgcaata gcctcttgag aaagcggtac atgcactgcc
    11281 atttgatccc catcaaagtc tgcattaaat gctgcacaaa ctaaaggatg aagttgtata
    11341 gccttacctt ccaccaaaac aggatgaaaa gcttgaatag aaagtttatg taaagtaggt
    11401 gcacggttta gcataacagg atgccctttt accacttctt ctaaacattc ccaaacttca
    11461 ttagttttat tttctatcat ttttttagct tgttttactg tggttgcata acctttttct
    11521 tcaagtttag ctaaaagatg tggtttaaaa agttctaaag ccattttttt aggcaaacca
    11581 cattgatcca ttctaagttt tggacccaca acaataacgc tacgacctga gaaatccacc
    11641 ctcttaccta ataagttttg tctgaaacgt ccctgtttac ctttaataat ttcacttaaa
    11701 gatttcaatg ggcgtttatt tgctcccttt acagcattag cacgacgacc gttgtcaaaa
    11761 agtgcatcaa cagcctcttg aagcattctt ttttcatttc ttataatgat ttccggtgca
    11821 tcaagttcca taagtttttt aagacgtgta tttctattga taacgcgacg atataagtca
    11881 ttcacatcag aaactgcaaa ttttccacca tctaaagcca ctaaaggacg caaatctggc
    11941 ggtaaaactg gaagatttgt aatcatcatc cattcaggac gatttggtac ggcttcatcg
    12001 ctatcggcat tggcgtttaa atttgaattt aagaaatttt ctacaacttt taagcgttta
    12061 atgatagttt ttttcttagc ctctgaattt gtagccgcca tttcttcttt aagctgattt
    12121 aaaagtgcta caagatctaa atttgcaagt aaatcacgaa caacttctcc acccattctt
    12181 gctttaaagc cactattttc atagcgttgc attaaatttt gatattgctc ttcgtttaaa
    12241 acatcacaat attctacttt tttggtgctt tcattatcat agaaagcatc acctgggttt
    12301 tcaacgatat aagcttcata ataaagcaca cgctcaagat ctttcatctt aacacccaaa
    12361 agcgttccta tacgacttgg aagagaatta acataccaaa tatgagccac aggagttaca
    12421 agctcgatat gtcccattct agaacgacgc acttttgaat ttgctacttc aacgccacat
    12481 ttttcgcact taacaccttt aaaacgcatt tttttatact tgccacaaag acattcataa
    12541 tctcttatag gtccaaaaat ctttgcacaa aaaagcccat ctctttcagg ctttaaggtt
    12601 ctataattga tagtttctgg tttttttact tctccataag accatgattt gattttttca
    12661 ggacttgcaa gtcttagttg aaacgcttcg aaatccctag gtcttgcatc ttctttgatt
    12721 tctattactt taaatttact cattatcttc atccttatca aaaatctcaa catctaaagc
    12781 aagagattta agctcattgg ttaatacaaa aaatgtttca ggaattcctg ttgctggaac
    12841 attttcacct tttgtcaatg ctttataagc actaaatcta ccttctacat catctgattt
    12901 gatagttaac atttctctta aagtatgagc cgctccataa gcttcaagtg cccaaacttc
    12961 catctcccca aatctttgtc ccccaaagag tgctttacca cccacaggtt gttgggtaac
    13021 taagctgtaa ggtcctgtac ttcttgcatg aactttctca tcaactaagt ggtggagttt
    13081 tagcatatac atacatccca catgaacacg ctctgcgatt ttctcacccg tgcgtccatc
    13141 ataaagttct gttttgccgt ccatatctat cttggccatt tcaaaaagct tgctaaattc
    13201 ttctatattt acaccttcaa aaacaggagt agcaaattta actcctttac tccagtctct
    13261 agcatagttt aaaagctctt catcgcttaa gcttttaata aattcttttt cgcttgcaag
    13321 tcttggaata gaacaaattt caagcatttt tgctcttaat tctttaagaa aatctttttg
    13381 ctttctgtca aaaatttctt gaatctgatc tccgagtcta agtccaatta aacccaaatg
    13441 gctttctaaa atttggccta tattcatacg acttggaacg ccaagtggat taagcgcaat
    13501 atccacgctt ttgccatttg gtaaataagg catatccact tcaggaacta tagttgaaac
    13561 tatacctttg tttccgtggc gtcctgccat tttatcaccg actttaagct ttctctttgt
    13621 agcaatataa actttaacaa gcttaattac cccacttggt aaaatatcat ctttttctaa
    13681 aatttcaagc ttttcatcgt gttctgcttt taattttttc ttctcatttt ggaaatgatt
    13741 ttttaaatca tcgtattctt tttgaatctc tttagaataa gctttaatca aagttgttaa
    13801 agtaaaacga ttgatttttt caagttcgct aatatctgca gtttgtcctt ttttataatt
    13861 tttatctcca attttttgat cactatttaa aggggctttg gaaagaagag cgcaaacacg
    13921 aagcatttct tctctatcca tcatcaaaag tctatcatga tgttcttttt ctaaagccat
    13981 tttttcttta tcataagatt ttattgcgcg atcatctttt tcatagcctt ttttagtgaa
    14041 aattttaaca tccacaacaa caccctctaa agaagcggtt gcataaaggg atttattcac
    14101 aacatgtcct gctttttctc caaaaatagc tcttaaaagt ctttcttcag gagttggttt
    14161 aacctcacct tttggagaaa ccttacccac caaaatcata cctggtttga tatgagtacc
    14221 aatttttgca ataccgctct catcaagatg tgcaacatct tcttctttta catttgggat
    14281 atctttggta atttcttcta taccgtcttt tagttctctt gcttcaattt ctttttcata
    14341 aatgtgcacg cttgtaaagg tatcttcacg aataattctc tcacttacaa ctatagcatc
    14401 ctcatagtta taaccattcc aaggcataaa agcgattaaa gcatttttac ctatagcaag
    14461 ttcgccttga tccatagaag gaccatctgc gataatttgt cctgctttta ctatatcacc
    14521 ttttttaaca ataggatgtt gaatataatt tgtattttga ttggttctta aatttttctc
    14581 catagtataa tggtcaataa atggaccttt atcatcttca cctaaaatga aaatgctttt
    14641 attatccact ttctcaacca caccgccacg ctttgcttta acagcttccc aagcatcacg
    14701 tgcaataatt tgttccatgc ctgttcctac tatcggagct gaagcagtaa gaagtggcac
    14761 agcttgacgt tgcatgtttg aacccattag cgctctgttt gcatcatcgt gctctaaaaa
    14821 cggaatcaaa gaagccgcaa ccccaacaac catacctgag caaagatcaa ttaattgcac
    14881 ttcttcgcgt cttgcaagta tagtttcacc atcttgtcta gcctcaacaa attcttctac
    14941 tatattgcct ttagcatcaa ccttagttga agctggtgcg ataaacaagc cttcttcttg
    15001 tgtcgctgta agataaacaa cttcattagt cactttacca tttacaactt ttctatatgg
    15061 cgcttcaaca aagccaagtt catttacttt tgcataagta gaaagagtgt taatcaaacc
    15121 aatattttga ccttcaggtg tttcaactgg acaaattcta ccataatgtg tcgcgtgaac
    15181 atcacgcact tcaaaacctg ctctttcttt tacaagtcca ccttcaccaa gcgctgataa
    15241 acgacgctta tgagtaacct cgcttaaagg gttggtttga tccataaatt gcgaaagctg
    15301 acctcctgta aaaaattcaa tgatagttgt agtaatcatt ttaggattga ttaaatcata
    15361 aggcattact ttatcaagat ccgcatttaa agaagtaaat ttatctctga tcgccttttg
    15421 catttttgca agacctaaat gaagttcatt ggccaaaagt tcacctatag aacggatacg
    15481 acgatttcct aaatgatctc tatcatcaat atgtccttta ccatttttta ctttaattaa
    15541 atattttgca gttttaataa tatcttcatt agtcaaaaca gtaacatact caggtacttc
    15601 aagacctaat ttatggttca ttttcatacg acctaccttg gtaagatcgt atctttcagg
    15661 attgaagaat aaatcattta caaaagcctt cgctgcatct tttaccacag gttcacctgg
    15721 gcgcataact ttgtaaattc taatcgcagc taaatcattt tcatcatcga tattttcact
    15781 ttgtttaaga agttttagag tttctccatc ttgagcaaag gagttaataa tcgctgcatc
    15841 aacgccatta gccaagtcat ttgctatatc aaaacttttt tgctctttaa tcttagcaag
    15901 cttactctca tctaacaaag ttaaagaatc aaataaaacc tctccacttt ctttatcaat
    15961 aataggattt gctaaataac gattaagtaa aatttctaca ggatattcta tccattttaa
    16021 accgtcttta ataagctgtt ctgctttttt ctttgtaagt ctttttccag cttgatgaac
    16081 gatttttcct ttttcatctt taatatcata ttctattcta tccataaaat catttggatt
    16141 aaattctgtt aaaaatttat cttttttcac atgtatagtc tgaataggat aaaacaactt
    16201 aataatatct tgttttttat accctaaagc tctaaaaagc atagttacag gaacttttct
    16261 acgcttgttg attcttacat acaaaacatc tttggcatcg tattcaaaat aaagccacga
    16321 accacgatca ggaataattt gtgctgtata aacaagctta tttgcaaccg ttgagctttc
    16381 ttcttcttta aaaataacac cagggcttct atgtaattga tttacaacca ccctctcaac
    16441 cccattaatg ataaaagata cacgatctgt cattaaagga atttcgcgga tataaatttc
    16501 ttgttcttta atatctttta cgccaacttt ttcccctgtt ttttcatctt tttcatgcag
    16561 agtaagacgg attttcattt ttaaatttac agaataagtc aaacctcttt ccatgcattc
    16621 gcgaatggta tattttggct tgcctatttc actactaaca tattcaagac tcaatctatt
    16681 ttgcggatca tgaataggaa aaattgattt aaaaactttt tctataccac tttcaccatt
    16741 atcaagattt aaaaaataat caaaactctt tttttgtaat tgtagaagat ttgggatttc
    16801 tatttgtttt gaaatgtttg agaagtctac tcttaaacga tttcctaatt tattatctaa
    16861 catatcgcac atacctcatg gtaaattttg taaatttaaa aaagaagacc taaaaattag
    16921 gtaaaaataa aaaaagaaga cttgccttga caaatcttct tctaacttta aagcttaaaa
    16981 ttacttaagt tctactttag caccagcttc ttcaagttgt tttttagctt cctcagcttc
    17041 agctttagcc acaccctctt ttagagttga aggagtttgc tcaactgcat cttttgcttc
    17101 tttaagacca aggcctgtaa gagcacgaac gattttaata acttcaatct ttttagcacc
    17161 gccatcagtt aaaacgatat caaattcagt tttttcttca gcagcagctg cagcaccacc
    17221 agctgcagca ccaccagcta ccattacagg ggcagcagac acaccaaatt tttcttcaaa
    17281 ttcttttaca agttctgata actcaagaac acttaaattt gaaatatatt ctaatacatc
    17341 ttctttagaa attgccattt tttatccttt tatttaattt attcagattc ttttttattt
    17401 ttaagcgcat ttaaacctat tgtgaaattg gtaattggcg cattccaaac ttgcaaaagc
    17461 atagcaagca actcattgcg tgaaggcatt ttagcaagag ctttaacctt agcaacatct
    17521 gcaacttcgc cttcaatata agctgttttg atttcaaatt tatcgttatt ttcttcaaat
    17581 ttagcagcta cttttgaaac acttagctga tcttcgcccc aaagataaat atttgtatct
    17641 ttaagaacta gacctgtttt accggaattg ttaagagcaa tgttagccaa agtattttta
    17701 acaatttgaa cttttacatt gttttctctt gcattatttc taagctcttc tagttttttt
    17761 gtgctaagac ctctgtaatt acaaactaca atagcttcac tagctttaaa accttcttca
    17821 agtttagcaa taatctcaac tttttcgctt ctagtcacat tttctccttt ccgattgaga
    17881 tttcaagtag agtggaaatc caattaagct tacgcctcga ctatcttcaa tctaaaataa
    17941 acatctcaaa aaatcaaaaa ttttttcaaa tgtttatttt agaacaaaag agttgcaaaa
    18001 aagcaactct tatttcatat caagcaattc ttgtgtttca agctttacag aagggctcat
    18061 tgttaaagat aaagccgcat ttttaatata tctaccttta gctgcggcag gtttatgttt
    18121 gttaattgcc tttacaaaag tgctaacatt gtcccataat tgttctttgg aaaaacttac
    18181 tttaccaaga cctgcatgga tatttccttg cttatcaaca cggaaattta cctgaccact
    18241 ttttgcatta ttaactgctt gagcaacatc catagtcact gttccggttt taggatttgg
    18301 cattaaacct tttgggccta aaattctacc aactttacca acaagtccca ttaaatttgg
    18361 agtagcaatc aaaacatcaa aattcatatt acctttttga atttcttcta ctaaatcatc
    18421 gctacccaca atatctgcac cagcattttt cgcttcatca gcttttgcgt cttttgcaat
    18481 tacagcaaca cgaacttttt tacccgttcc agcaggtaaa acgacagatc ctcttaccat
    18541 ttgatctgca tgtcttggat caacattaag ttttaaagca atttctacag tctcatcaaa
    18601 tttagcagac tttaaagtct ttattgtatc aattgcatcg cttaaagcat actctttatt
    18661 tgaatcaatt ttttgtgata attcttttaa tctttttgct atcttagcca tttattttct
    18721 ccgcatttta aagtgctacc gccttttacc ttggcggtga aaggattaat ctacgatttc
    18781 aacacccata gaacgagctg aacctgcaat aattttagca gcttgatctc tatctttagt
    18841 atttaaatct gcaattttct tatctactat ttctaaaact tgagcacgag ttaacttacc
    18901 caccttattt ttaagtggat tatccgtacc tttagaaatt ccagctgctt ttttgatcaa
    18961 atccgtagct ggcggttgtt ttgtaataaa agtaaaactt ttatctgcat aaacagtgat
    19021 aacaacaggg atattaaaac ctgccatatc ttttgttctt tcattaaaag ccttacaaaa
    19081 ctccataata ttaacacctt gctgacccaa agcaggacca acaggtggtg atgggtttgc
    19141 ttttgtggca gcaatttgca atttaatttc gcctacgact tttttagcca taacaaatct
    19201 ccttacttga tataaattaa attattttct caacttgaga atataagatc tccactggag
    19261 ttgagcgtcc aaaaatagaa acatttaatt ttaataaacc acgaaccata tcatactctt
    19321 ctacaattgc agtaaagttt gcaaatggcc cttctgtgat tctcacattt tccccttctt
    19381 caaaagaaat ctttggttta ggcgctgcac gattgtgaac tttttccaaa atcaaattaa
    19441 tatctttttc tgttaaaggg gttggctttt tggattctcc aataaaacga ccaacctttg
    19501 gaagagattg aatgcgatgc caaagctctg tatttaaatc aagaagtgca aaaacgtatc
    19561 ctgaatacaa acttctttcg ctaatcttct cctttccatt cttaaattca ataacatctt
    19621 cagttggaac aacaatttct ttaagttgtt cttcaattcc gttatctttt actaaatttt
    19681 caatggctct tttaactgcc atttcactgc cagcataagt ttgaattgca taccatttat
    19741 gagtactcat ttactctcct tatacgatcg cagaaacaat agaggacata agccaatcca
    19801 ctaacgccaa aaacaaagaa atcaccgcaa caaccacaaa aactgtaata taggcatttc
    19861 ttacctgttc ttttaaagga aaaattactt tccttaattc ggcttttgat aatttaaaat
    19921 aagttattaa tttttccatt tatttaaacc ttaattatgg cagggcaaga gggattcgaa
    19981 cccccaacca tcggatttgg aatccggcgc tctaccgttg gagctattgc cctaagggcg
    20041 caagcttaac tttttagctt aacttctttg tgaagtgtat gtttttttaa tcttgggcaa
    20101 tattttttta attctaattt ttcagtagta tttttactat ttttataggt gctataatta
    20161 atatcaccac attcttcaca ctttaaacca actttaattc tcatttcaat tttccttaaa
    20221 aaattaaagc caagctttta acttggcttt attaaattat ttaataattt tagaaacaac
    20281 acctgaacca acagttttac caccttcacg aatagcaaaa cgagttcctt cttcaagtgc
    20341 tactggagcg atcaagctta cagtaattct cacattttca cctggcataa ccatttcaac
    20401 accatcagct aatttaatcg aacctgtaac atcagttgtt cttacataaa actgtggtct
    20461 atagttgtta aagaatggag tatgtctacc accttcatct ttatttaaga tataaacttc
    20521 agcttcgaag tcagtgtgtg gagtaattga ttttggttta gcaagaacca taccacggat
    20581 aacttcttcc tttttagtac cacgaagaag aacacctacg ttatctcctg cttcgccttg
    20641 atccatttct tttctgaaca tttcaacacc tgttacagtt gttgtttgag tatctttaat
    20701 accaacgatt tcgatagtat cacctacttt tacaacacct ttttcaattc tacctgtaac
    20761 aacagtacca cgacctgaaa ttgagaaaac gtcttctatt ggcattaaga agtctttttc
    20821 agtatcacga gttggagttg gaatatagct atcaactgca gccataagat ccataatttt
    20881 tgctgaccat tcaccatctt gtccagcttt agcttcttca agagctttta aagcagaacc
    20941 agaaataata ggtgtatcat cgcctgggaa atcataagag cttaataatt ctctaatttc
    21001 catttcaact aactctagaa gttcagcatc atcaaccata tctgctttat tcataaaaac
    21061 aacaatatat ggaacgccta cttgacgaga aagaagaatg tgttctctag tttgtggcat
    21121 aggaccatct gcagcagaaa caaccaagat cgctccatcc atttgtgcag cacctgtaat
    21181 catgttttta acataatctg cgtgacctgg gcagtcaacg tgtgcatagt gacgattgtc
    21241 tgtttcatat tcaatatgag aagtagcaat agtaatacca cgctcttttt cttctggagc
    21301 attatcgata ttatcataat ctttaagctc tgctaaacct cttctagaaa gaacagcaga
    21361 aatagcagct gttaaagtag ttttaccatg gtcaacgtga ccaatagtac caatatttac
    21421 gtgtggctta ttacgtgaaa atttttcttt agccattttt ttcctccgta taaaaaataa
    21481 attgagcaaa gcaagtctta tatctatata attttttcaa ttcatggagc tcatagcggg
    21541 aattgaaccc gcgacctctc ccttaccaag ggagtgctct acctctgagc catacgagcg
    21601 ctcagaaaaa ttatacataa taatagacaa caaaaactct taaatgggat atatactgta
    21661 agttaaaggt tttaaaatac agctcccagt tcttttaaat tgttggagcg ggaaacggga
    21721 ctcgaacccg cgaccctcag cttggaaggc tgatgctcta gccaactgag ctactcccgc
    21781 aaagcatggt ggtgagtcgt ggattcgaac cacggaaggc gaaagccagc agatttacag
    21841 tctgccctcg ttggccactt gagtaactca ccataaaaat attgcttttt caatattctg
    21901 gtcaaacact gctaaaataa atggagctgg ttaagggact tgaacccccg acctgctgct
    21961 tacaaggcag ctgctctacc aactgagcta aaccagcaaa aataaaagtg agattataac
    22021 tcaaaaaaaa atttttgtca agactttttt agtttttcta taaaatttta gtcttgtaaa
    22081 gtttattatc ataaaccgat attattttta tctatttatg ataatcaaac aaatttaaaa
    22141 atttctttgc tctttcgctt tttggatttt caaaaaaact tttaggatca ttttcttcga
    22201 tgatttttcc ttcatccata aaaataattt tatctgctac agctttagca aaacccattt
    22261 catgagtaac aataagcata gtcataccct cttttgcaag atttagcatt acctctaaaa
    22321 cttctctaac aatctcagga tccaacgctg ctgtaacctc atcaaaaagc attaactcag
    22381 gattcataca tagacttctt actatggcaa ttctttgctt ttgtcctccg ctaagttctc
    22441 ttggataagc atgaatttta tgcaaaagcc ccaccttttc aagccaaatt ttagcctctt
    22501 ttaaaacctc atctttcttt cttttttgca ctttcatagg ccctaaaagt atattttctt
    22561 caacacttaa atgctcaaaa agctcataag attgaaaaac cataccaact ttttgacgca
    22621 ttcttggcca ttctttaaaa tctttatcta ttttctcatt atcaatataa atattaccac
    22681 ttgcaatctc ttcaagccca ttaatacaac gcaaaagcgt agattttcca catccgctag
    22741 gacctaaaat caccacaact tctttagcct taacttctaa attaatatct tttaaggcgt
    22801 gatgcgaacc ataatacttt tgtaaatttt ctatttttag tatgctcatt ttagctccat
    22861 tttttctcta attttcttga atataaagtg ataggataac aaagtataaa aaagataaaa
    22921 aaaatcaaac cataaataat aaaaggtgca aaatcatttc tattatgaaa ttctataatt
    22981 tgttgcccta cttttacaag ctctaccgcg ccgattaaat aagcaaaggt tgtactttta
    23041 atcatacgag taagtaaatt catgctcata ggagttaaac gacgcatagc ttgtggaata
    23101 ataatataaa caaaactttg caccgtattt aaacctaaag atgatgcact ttcatactga
    23161 tgttttggaa tactctgcaa ggaaacacgc accaaatcca tcatctcaaa acaaccccaa
    23221 atgctaaaaa caataatagc tgcacttaca gaactcaaat cccacccaaa ccatctagga
    23281 aaaccaaaat acaccacaaa aagccatact aaaagtggca taacacgcac aaattctaaa
    23341 cccaaacgac aaaaagcata gatataggta tttttaaaac tcattaaaat tcctaaaaat
    23401 aacccaccta tcgaagtaat aataatgctg ataaatgaaa tttcaagagt gacaaaaagc
    23461 ccttgccaga gtcttaaaag cgtatcggta tttaaaagtt caagcatgaa gcaacctttt
    23521 ttcaaacttt agcaaaataa aagacaaagg taagataata cacaaatatc ccataaacaa
    23581 caaaaacaat agctcatctg tcttataggt taaggaattt aaactcttca ttaaattcac
    23641 caaatctggc aaggcaataa tactaacgac tgaagtttct ttgattaaaa atataatatt
    23701 agcactaata cttggcatag aaatagccaa agcttgcggc aaaatcacat aacgcaaatt
    23761 tccaaatttt gaaaaaccca aagaaagtcc cgcttcaaac tgctgttttc ttatggcttc
    23821 aaatcccgct cttaaacttt cagccatata agaacctcct aaaaaactaa gtcctactat
    23881 agcacaagca aaagaaggcc ttaaagtttc ttctacgctt aagcaaatca aatcaagcgg
    23941 tggaatttgc tctaaatgta tattaaattt aggtaaagca taatataaga aaaaaagttg
    24001 aattaataaa ggcgtatttc ttgaaaactc tatataaagc ttgcaaatat tttctaaaat
    24061 ttttatttta aaataactca ttaaaatgca aaacaagcct attatcaaag aaaaaataat
    24121 tccaaaaaag cttagtttta tcgtaagcca agcagccgtt aaaaaagcag gagcttgaac
    24181 taatataaaa tcaaaatcca ttctctacct taaattttta ccaaagttct ttcatgatca
    24241 tatctttatt taaaatttca attctacctt tttttgtatc aataagttct gaaattttaa
    24301 gttcttttaa cactcgagat aaagattgtg ctctaacatt taaatcaatt gcaatttgtt
    24361 tttgtgaaat tgtatctaaa tttttttcat tttccaaaag atactttaat aatctcgtcc
    24421 ttaaatctaa tgcattttga gataatttct tttctaaaat tttaatttta tcaaaaagtg
    24481 aactgataag taaaaaattg aattctttat tttcactgca taaattttga aaattaataa
    24541 aatcaatttc caaaatttct ccatcttcct caaatatagc attagcagga taatttaatt
    24601 ttttaaaagc aggcatttct gctataaaat ttggaggatt aaaataatgc aaagtaattt
    24661 ctttatcact tgctgtactt ttataaatgc gtatttttcc cttgagtaaa ataaaaaatt
    24721 ttttagcctc ttcgccctca taaaataaaa tactattttt ttgaattttt tttaattttc
    24781 ctacactaga taaaagttct aaataatctt tcattatata cattttccat tcttaactta
    24841 tgttaaattt aatttatctt atttttgcta tattaacgcc ataaaattaa catttaagaa
    24901 aggcttatat gaaatttgaa acaattaatc aagaaagcat agcaaaactc atggaaatat
    24961 tttatgaaaa agttagaaaa gataaggatt tgggccctat ttttaacaat gctattggaa
    25021 caagtgatga agaatggaaa gaacataaag caaaaatagg aaatttttgg gcaggcatgc
    25081 ttttaggaga aggtgattat aatgggcaac ccttaaaaaa gcatctagat ttacctcctt
    25141 ttcctcaaga attttttgaa gtttggctag gactttttga agaaagttta aatatggttt
    25201 ataatgaaga aatgaaagca gttattttac agcgtgcaca aatgatagct tcacattttc
    25261 aaaatatgct ttataaatat ggtggacatt aatttggcaa tttttttgcc aaatcttttt
    25321 tcaccttttc taaaatctcc tcatccttgg aaaaatcaaa aaatttaaac tcatttccat
    25381 gttgcataaa accatcgagc aaatctccac tcaaacgatt tttaagatca agctctgcta
    25441 ttttaaaccc atctaaagtg ctagcaaatt cttttaaacg actcggaatt tctttaagtt
    25501 tagtataaag atagcaagta cttttaagcc ctacacgacc tacacggcca cgaagttgat
    25561 gtaaggtagc aagtcctaaa cgttccgccc ccacaatcac tatcatactc aatcttggca
    25621 aagaaatacc tacttccacc actgtagtgc ttagtaaaat atttccctca tctctaaaac
    25681 gctctaaaat ttcatctttt tgtttatctt ttccatgagt tacaaaaact ttttcataat
    25741 gactctgcca atattctttg gcctgctcta aagaaagata aggaatatta tcactagcac
    25801 tcactaaggg ataaataatg ataatttgat gatttttaga aatttcttcc ttgatcttct
    25861 cgctaagctt agaaaaacct tcattttgta tgcaataagt tgtaatatct tttttaaaag
    25921 gcatttgttt aataaagcta aaatttaaaa gttcagattg tatcatgctt aaagttcttg
    25981 gaataggcgt agctgaaaac tgtataaaat gaggggcaaa ttcttgctta tttaaagaat
    26041 gaattttttc acgctgagct gatccaaaac gatgttgttc atctatcatt acaagcacgg
    26101 cattatgact ttctaaatga attaaagcat gagtgcctat gataagattt gctttttgga
    26161 tattttgttc taaatctttt tcttttttac cccctttaat aaacaaaata ttcataaaat
    26221 caggtaaaaa tttcttagcc tcttcataaa gctgatacgc taaaatacta gtaggtgcca
    26281 ttaaaatagc ttgcttagga taaaccatca aagccgcacc gagtaaaacc aaggttttac
    26341 cacaccccac atcacccata atcacacgcc ttttggcttc ttttgagtgt aaatcttttt
    26401 ctatgtcttt taaggcgtta agctgatctt tagtaagaga aaaaggcaaa tctttaagcc
    26461 aattagctat attaaaaaca ttgatttgat gagctttaaa atgcgtttgt ttagctttta
    26521 aacgctttaa aaaattatat atttctatat attttaaatc tttgctaaaa ttttgcaaat
    26581 tttcaaacat aaaaaaactt ttttcatcat aagcatgtaa atttaaaaga aaatgtatat
    26641 atttatcctc tatgccactt tcttttaaat tttcataatt aagatattta tgtataaaag
    26701 cggcaatttt tgtatctttt aaacctaaaa tttgatactt tggactaaaa ccctcaaaag
    26761 aagttaaaat tttaggattg ttaaattgcc aagtgtgatt aaaacgcgag agtttagcat
    26821 taaaaataag ctcttttcct accttgcaaa ccccaaaatg ccaagctcta ggatgaaaaa
    26881 atacaaaaga aatattttct tgccattctt cacaaaaacc taaaccaaaa agttgatttt
    26941 ttcttgaact aacgcttttt atagtgattt tttgggtgca aatttcattt tctttgggat
    27001 ttttacttgg atttaaattt tcaatttttt taggtaa
//
LOCUS       DARBAC010000005        26766 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.005, whole genome shotgun sequence.
ACCESSION   DARBAC010000005 DARBAC010000000
VERSION     DARBAC010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26766
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.005"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..734
                     /locus_tag="SB799_000157"
     CDS             <1..734
                     /locus_tag="SB799_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEG0867427.1"
                     /translation="HSFQNFYEDFKSHKFIFNHEHQSIFKKNTSQQITLLHPTRIRRP
                     KFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFKL
                     LNSALEELGYKYGDFPVHDNLESALEATKDSLSFRMGIVHRGLEAKGLDANPFVVQKL
                     QSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWKFAIQNKYDFIELCKTFKQFSLAGK
                     KLNIQARIKAGFTQEECEVIEKFYS"
     gene            complement(725..1453)
                     /gene="pssA"
                     /locus_tag="SB799_000158"
     CDS             complement(725..1453)
                     /gene="pssA"
                     /locus_tag="SB799_000158"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEG0867428.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKIRNQE"
     gene            complement(1463..2080)
                     /locus_tag="SB799_000159"
     CDS             complement(1463..2080)
                     /locus_tag="SB799_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEG0867429.1"
                     /translation="MKDFIAKDGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEITIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            complement(2077..4014)
                     /gene="ftsH"
                     /locus_tag="SB799_000160"
     CDS             complement(2077..4014)
                     /gene="ftsH"
                     /locus_tag="SB799_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEG0867430.1"
                     /translation="MNNNTPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NSLPTRLQELEEVKTEVKVEE"
     gene            complement(4018..4863)
                     /locus_tag="SB799_000161"
     CDS             complement(4018..4863)
                     /locus_tag="SB799_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEG0867431.1"
                     /translation="MQKKYYELFFIVEERYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEELSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNFINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     ADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            complement(4886..5278)
                     /locus_tag="SB799_000162"
     CDS             complement(4886..5278)
                     /locus_tag="SB799_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HEG0867432.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            complement(5391..6284)
                     /locus_tag="SB799_000163"
     CDS             complement(5391..6284)
                     /locus_tag="SB799_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HEG0867433.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLKRCVL
                     SDPYPSVLNNELCVTASIPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            complement(6284..8056)
                     /gene="pglF"
                     /locus_tag="SB799_000164"
     CDS             complement(6284..8056)
                     /gene="pglF"
                     /locus_tag="SB799_000164"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HEG0867434.1"
                     /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSKMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFVVEEKEKIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGI"
     gene            complement(8058..9218)
                     /gene="pglE"
                     /locus_tag="SB799_000165"
     CDS             complement(8058..9218)
                     /gene="pglE"
                     /locus_tag="SB799_000165"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HEG0867435.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEYFSFLDELENS
                     RSNRWLSTALIDFDKNELNACQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHTQEVFKGTKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
     gene            complement(9316..9906)
                     /gene="pglD"
                     /locus_tag="SB799_000166"
     CDS             complement(9316..9906)
                     /gene="pglD"
                     /locus_tag="SB799_000166"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HEG0867436.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFEN
                     TLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSASVEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKSQNEKGVFVGVPAKRKI"
     gene            complement(9893..10495)
                     /gene="pglC"
                     /locus_tag="SB799_000167"
     CDS             complement(9893..10495)
                     /gene="pglC"
                     /locus_tag="SB799_000167"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HEG0867437.1"
                     /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLSLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            complement(10488..11618)
                     /gene="pglA"
                     /locus_tag="SB799_000168"
     CDS             complement(10488..11618)
                     /gene="pglA"
                     /locus_tag="SB799_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HEG0867438.1"
                     /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDLIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYIESEKKELFWRNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGVVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV"
     gene            complement(11628..13769)
                     /gene="pglB"
                     /locus_tag="SB799_000169"
     CDS             complement(11628..13769)
                     /gene="pglB"
                     /locus_tag="SB799_000169"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HEG0867439.1"
                     /translation="MLKKEYLKNPYLVLFAMIILAYVFSVFCRFYWVWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSALTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPTILLANEYKRPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDLSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAIMVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFALSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKTDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            complement(13773..14870)
                     /gene="pglJ"
                     /locus_tag="SB799_000170"
     CDS             complement(13773..14870)
                     /gene="pglJ"
                     /locus_tag="SB799_000170"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HEG0867440.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYAKNNFNSLANKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSINPKKCEILYNAIDLENIEQKALEDVALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            complement(14858..15787)
                     /gene="pglI"
                     /locus_tag="SB799_000171"
     CDS             complement(14858..15787)
                     /gene="pglI"
                     /locus_tag="SB799_000171"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HEG0867441.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            complement(15780..16859)
                     /gene="pglH"
                     /locus_tag="SB799_000172"
     CDS             complement(15780..16859)
                     /gene="pglH"
                     /locus_tag="SB799_000172"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HEG0867442.1"
                     /translation="MMKISFIIATLNSGGAERVLVTLANALCKEHEVSIIKFHTGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKADVFISFLDTTNIACI
                     LANIGLKTPLIISEHSNEAYLKPKTWRFLRRVSYPFCDALSVLGSSDKVYYERFVKRV
                     KLLLNPCHFSDEIPFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGELRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISNIKEEWLKLIVEVKNA"
     gene            complement(16856..18550)
                     /gene="pglK"
                     /locus_tag="SB799_000173"
     CDS             complement(16856..18550)
                     /gene="pglK"
                     /locus_tag="SB799_000173"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HEG0867443.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFVSFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGLRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLNIIYQNLRQE
                     EENLGEGKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILIDKQELNASNAKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVD
                     EEKLNKVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEILVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
     gene            complement(18544..19530)
                     /gene="galE"
                     /locus_tag="SB799_000174"
     CDS             complement(18544..19530)
                     /gene="galE"
                     /locus_tag="SB799_000174"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEG0867444.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKIRTFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRNKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLSALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLGLICKSAFDWEKQC"
     gene            complement(19589..20383)
                     /locus_tag="SB799_000175"
     CDS             complement(19589..20383)
                     /locus_tag="SB799_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEG0867445.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIANFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFCENELEKIHEYCESDVLNTYMLFLKYELI
                     KANVSEEDYIDFLSYMRDFLRAKKSDRSYTEVFAKACESEISKVQS"
     gene            20449..21477
                     /gene="waaC"
                     /locus_tag="SB799_000176"
     CDS             20449..21477
                     /gene="waaC"
                     /locus_tag="SB799_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEG0867446.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLIDKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQAKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMDLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNTKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            21467..22345
                     /gene="htrB"
                     /locus_tag="SB799_000177"
     CDS             21467..22345
                     /gene="htrB"
                     /locus_tag="SB799_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HEG0867447.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARITFYLNKK
                     HRKIIDTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENFLIDALALKRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKERALGILTDQDCVENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKAKDSQNANLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNQGIYS"
     gene            22342..23043
                     /locus_tag="SB799_000178"
     CDS             22342..23043
                     /locus_tag="SB799_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0867448.1"
                     /translation="MNISIVILTFNSQKYLQEVLQSVNFANEIILIDSGSTDDSLIIA
                     KTFKNVKIFHQDWLGFGKQKQFGVEKANNDWIFVLDSDEVFTEELKEEVLQIIKNPSF
                     KAYKVARLNFFFGEAITKMGLYPDYNIRLFHKKYAKFNEREVHESIICQEKIGKLKHH
                     FLHYAYENIEQFIDKQNKYSSLNPKKNNLLKALINPYWTFFKLYFVKLGFLEGKRGFI
                     IAKLYAQYTFWKYIK"
     gene            23054..23932
                     /gene="rfbA"
                     /locus_tag="SB799_000179"
     CDS             23054..23932
                     /gene="rfbA"
                     /locus_tag="SB799_000179"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEG0867449.1"
                     /translation="MKGIILAGGSGTRLYPSTLTLCKQLLPIYDKPMIYYPISVLMLA
                     KIKEVLIISTPKDIDRFKELFKDGSFLGMQIQYKIQERPEGLAQGLILAQDFIQNDDI
                     ALILGDNIFYGQGFSDILENAKDDLKKGFASIFSYHVKDPERFGVVEMDQNGNVLSLE
                     EKPKNPKSNYVATGLYFYNNDAIDIAKNIKPSARGELEITDVNIEYLRLNKLKSQHLG
                     RGFAWIDTGTHDSLIEASSFVQTIELRQGYKIACLEEIAYNNNWIDNETLEKRALLLS
                     KSNYGQYLYKILSQGK"
     gene            23932..24963
                     /gene="rfbB"
                     /locus_tag="SB799_000180"
     CDS             23932..24963
                     /gene="rfbB"
                     /locus_tag="SB799_000180"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEG0867450.1"
                     /translation="MYILVTGGAGFIGSNFLLYFFEKNPDAKIINLDFLTYASNISNL
                     NKLKNNPNYVFIQGDISDVFLVNEIFSKYKINAVINFAAESHVDNSIKNPDIFIKTNI
                     YGTWNLLNSAYKTWFLEPFLKKDEFKQSFFYQISTDEVYGSLGENGKFTEDNAYAPNS
                     PYSASKASADMLVRSYHHTYGLNAVISNCSNNYGPFQHDEKLIPTIIRNALNNAQIPI
                     YGDGKNIRDWLYVKDHCVAIESIYKYAFEKIKENNSFFDVFNIGTNEEWQNIDIANKI
                     CSYLDNVLPKNTSYKEQITFVKDRAGHDRRYAIDPTKLQRVIGWKAQENFNSGLDKTI
                     QWYIKKYKG"
     gene            24966..25415
                     /locus_tag="SB799_000181"
     CDS             24966..25415
                     /locus_tag="SB799_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002912325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FdtA/QdtA family cupin domain-containing
                     protein"
                     /protein_id="HEG0867451.1"
                     /translation="MNYTILKFKTINSKNSILNVHQKDVNCPFEIKRIFYIYDFLNDS
                     IRGDHANLNSEFIFIALNGSCEILIDDGQTKQKIILNDKTKGLYIDKMIWKQMYNFSK
                     DCILLVLTNTYYDEKEYIYDYKYFCELKNNIGRRGGVCYKNHALKVA"
     gene            25412..25816
                     /locus_tag="SB799_000182"
     CDS             25412..25816
                     /locus_tag="SB799_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxcM-like domain-containing protein"
                     /protein_id="HEG0867452.1"
                     /translation="MKNYKILKLDAIKDDRGKLVALESNKEIPFEIKRVYYIFDTDPN
                     FPRGAHAHKNLEQVLIMMSGSCDIVLNDGKNCEKICLNRPDMGLYIGKNMWREMKNFS
                     YGAKLLVLASDFYDEKEYIRNYDEFLRNINDT"
     gene            25806..26247
                     /locus_tag="SB799_000183"
                     /pseudo
     CDS             25806..26247
                     /locus_tag="SB799_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247173.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
     gene            26269..>26766
                     /locus_tag="SB799_000184"
     CDS             26269..>26766
                     /locus_tag="SB799_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0867453.1"
                     /translation="MSDFCIIGKNINMYLVDDEDAGFIFELRSDVVKNKFLNKIDNDI
                     KKQREWIRLYKKREKNKKEFYFTIRNKNNEKLGLVRLYDFIDDSFCWGSFIIKHGVAF
                     YISIEVVMNVYEFAFYNLGFNASHFDVRKDNDRVVAFHKKFGAKIIKEDVDNFYFNIS
                     KQEYEI"
BASE COUNT         9803 a         4625 c         3336 g         9002 t
ORIGIN      
        1 ttcactcttt tcaaaatttt tatgaagact ttaaaagcca caaatttatt tttaatcacg
       61 agcatcaaag cattttcaaa aaaaatacat cgcaacaaat taccttgctt catcctacac
      121 gtataagaag gcctaaattt gtcaattcaa ctcatgcgct tgctaaaata attcattcag
      181 tcgctcatat agaatttaat gcaattaacc tggctttaga tgcgagttat cgctttaaaa
      241 atctaccttt gcaattttat tacgattggc tggaggtggc agatgaggaa attaaacatt
      301 tcaaactttt aaattcagca cttgaagaac ttggttacaa atatggagat tttccagtgc
      361 atgataattt agaatctgct ctagaagcta caaaagactc tttaagcttt agaatgggaa
      421 tagttcatag aggtttagaa gctaaagggc ttgatgccaa cccctttgtt gttcaaaaac
      481 ttcaaagctc caatcattcc attaaaaatc ttttaatgga atatcttgaa attatactta
      541 atgatgaaat aaaacacgtt aaaaaaggag atacttggtg gaaatttgca attcaaaaca
      601 agtatgattt tatcgagctt tgtaaaacgt ttaaacaatt ctctcttgca ggaaaaaaac
      661 ttaacattca agcaagaatc aaagctggct tcactcaaga agaatgcgaa gtcattgaaa
      721 aattttactc ttgatttctt atcttaaatt ttgaaacaat aatggtatat aaaacccgaa
      781 taattccata aagcacatac aagcttgcta aaattactaa actttcaaga ggataaagat
      841 ataaaaatga aaatattata attaaaataa tcaaaacttt taaaacacta gaacgattaa
      901 aatcaagctt tttaaagcta ggatagcgta tattacttac cattaaaagc cctaaaattg
      961 cttgaagcac caaaaaaact acaccataag gctttaaaaa atcataacta ataaacgcat
     1021 aagtccatat agcactcaca actgctgcag taggtatagg aagacctata aaaacagaag
     1081 gttcataagt gcctgtggta acattaaatc tcgccaaacg aatagctcca aaaaccacaa
     1141 aaaaagccgt aatcaaagat ccaagttttc caaaatcata acctatagcc atataaaaaa
     1201 gaaccgctgg agcaactcca aaagctacta gatcagctaa agaatcaaat tctactccaa
     1261 attttgaagt agaatttgta agtcttgcaa cacggccatc aagcccatcg caaatcaaag
     1321 ataaaataat ataaatcaaa gctgtataat aatttccatg tattgaagct ataatagaaa
     1381 taacccctaa aaaagctgaa gcagctgtaa aaagattggg taaaatataa attaattgcg
     1441 gtctgttatt cattattttt ccttacgcaa aatagcctag caatgagcct gctttaattt
     1501 catcatttaa gcctatatga attctagtat cttttggtaa aagtaaactt atagagccat
     1561 tgattaaaaa acccattcta tctcctgctt ttaaatcatg agaaatatta tcaagcttta
     1621 attttctatc aaaagaacct gcatagattc gcaaggctat cgttttattc tctttaactt
     1681 ttgccaaaat aaaagctctt tcattcatca tttttgcaga ttttaattca ctgcacaaaa
     1741 aaagcccatg tcgtaaacga atatctatta tagacattgc aaaaggtgta ttaaaattcc
     1801 cagcatcata aagagcgttt ttaatagtaa tttcaacaca ttcacccaaa tctttatgat
     1861 gaatattttc tattttagta accctaccat ccataggtgc aaaaatagct ttttcatcgc
     1921 tacaaacaag ttctcttttg ggcgctctaa aaagaaaaat acaaattaca attaatgcta
     1981 atagcaagat ggaaaaagaa taaaaaatcc acacaaaaat aaaaattaag cttaaaataa
     2041 taagacttaa atatccatct tttgcaataa aatctttcat tcttctactt taacttcagt
     2101 tttaacttct tcgagttctt gtaaacgagt tggtagacta ttttgatcct caaactcttt
     2161 aataatctca cgcactttat taccttcaat agtttcttct tcataaaggg ctgcaaccat
     2221 agtctcaatc gctcccttat aagtatttaa agtatcttta acatctttat agcgttcatc
     2281 taaggttttc tttacataat catctaaaga ttctgccatc ttttcagaat agtcttttat
     2341 agtttgccca ccacttaaga aagtatttct ttgtttttca agcaccataa gtcctgcaat
     2401 ttcactcata ccatacatag aaatcatagc ttttatgata tcggttgctc tttctaaatc
     2461 attacttgca cccgttgaaa tttcacctat aaacacttct tcagctgcac gaccacccaa
     2521 aagtacatct acttcagcga taagttcatg tttttgcatt aaaaatttat tttcctcagg
     2581 agtatttaaa gtataaccta aagccgcaag accacgcgga atcacagaaa ccttacttac
     2641 acgttttgcg cctttggttg tttcagcaat caaggcatga ccacattcat gataagtaac
     2701 aattttcttt tctttttcat taatacgacg tgatttcttc tcaagtcctg ctatagctct
     2761 ttcgacagct tcaactaaat cattttgttc tacatatttt ttagaatccc tacccgctaa
     2821 aagcgctgct tcattaataa tatttgcaag atcagctcct gcaagccctg cagttaagcg
     2881 tgctatatct tctactttaa cttttgggga tattttgaca tctttcatgt gcacttttaa
     2941 aatatcacac ctacctttaa aatcaggttt atcaactaaa acttgtctat caaaccttcc
     3001 tggtcttaaa agcgctgcat ctaaaacttc tgggcgattt gttgctgcta aaacaatgac
     3061 tggggaactt tctgtcccaa agccatccat ttcagccaaa agctgattta aagtttgctc
     3121 tctttcatcg tttccaccca tcatgccact tgctgcacga cttttaccaa tagcatctat
     3181 ttcatctata aaaacaatag caggagcttc tttttttgca ttttcaaaca aatctctcac
     3241 acgagaagca cctacaccca caaacatttc tataaaagat gaacctgaaa cactaaaaaa
     3301 cggcacatca gcttcacctg caactgcttt tgcaagcaaa gtttttcctg tacctggagg
     3361 tccaacaagt aaaagccctt ttggaatttt agctcccaat ttaatatatc tttcaggata
     3421 ctttaaaaaa tctacaattt cttttacttc ttctttagct tcttcaacac cagctacatc
     3481 gctaaatttt actttaggtt tttctgaatt tacaagcttc ttagaacttc ctatacccaa
     3541 tatagaactt cccatatttt tttgcatacg acttgccaaa aacatccaaa taccaaagaa
     3601 aataaatact ggcaaaaccc atgaaaaaag tatatccgta aaccaatttg tttcagaata
     3661 cgcaccataa gcgatatttt tactatctag taaactcaca agctcaggat cattaacttt
     3721 ttttgctgta taaacagtat tgtgagagct tgaaatcgct ttgattgttg tttgtcctat
     3781 gctaacttga ttgatttgtc cactttcaat aagctttttt aactcagaat aagggacatt
     3841 tttatttact tcattgccat tcaatgcccc gccaaaagaa ccattgccat caaaaaatcc
     3901 cttaaaaata attatcatta caattgcaaa aatcgcaaaa ataaaaatgg gatttttgtt
     3961 aaaaaaatta ttaccctgcg gattaccctt attatttggg gtattattat tcattactta
     4021 tcctttttta ttatttttat atacaaaact acaccactca ttgatttgca tttcatcaat
     4081 gagttccaaa tcttgaaatt tttctttaat tcttgttgaa tatttatcta aaattcctga
     4141 caaaataagt atagcattat cttctaaatg gtttttaata tctttttcta aaattaaaat
     4201 cacatctgca atgatatttg caacaattag attatataaa ccatttgctt tatctataga
     4261 tccacaccaa gccttgtgaa aatcaacacc atttaatctt gcattttcta aagaactatc
     4321 aatagccaac tcatcagtat cacaaatttc aacattgcag ccaaactttg ccataataat
     4381 acccaaaatt ccactaccac aaccaagatc taaagctctt aatttacttt tagaaaattt
     4441 ttgtaaaaat tttacacaag aatatgtgct ttcgtgatgt cctgagccaa aggctaaggc
     4501 tggattaatc tttatattta taaaattctt tttttcttct tgccaagtgg tatggatgta
     4561 aacattatcc actaaaatag gttttatgcc ttttttatat tcttgtatcc agtccttgtt
     4621 ttctttctct acaagactta aattagaaat aattttatgg tttaaattga aagtagttgt
     4681 aagtttttga gcaaatattt caagtgccca tgaaagctct tccaaactct catgggatct
     4741 aatgtaaaca ccattatctt tctcttctat ggcttctata cctaaatcaa aagcaaaatc
     4801 aagaaataaa tttttatacc gctcttctac gataaagaac aattcgtaat attttttttg
     4861 catttagaat tttaaaaatc agcctttact cagctgcacc ttctccactt cctgttccta
     4921 aaacatcttc aagtttttcc tttaaaactt gtggagtaaa aggttttaca atatagttat
     4981 ttacgccagc ttttaaagca gtaatcactt cagcttttcc gccctcagtt gtaaccatga
     5041 taataggcat atcttcatat tttttctctg ctcttacttt ttttaccaac tccaagccat
     5101 tcatttctgg catattccaa tctgtaatta aaacttttac atcttcattt ttagttaata
     5161 aatcccaagc ttcaacgcca tgctcagctt ctaaaacatc atcgtgtcca agtcttgtta
     5221 gggtattttt aataatcctt ctcatagtag aactgtcatc aacaactaac aatttcacaa
     5281 tttcgtcctt tcaaagtttt tatagtttta ttttaccctt tttagcctta ttaatcaagc
     5341 taaaaaattt taaaaaacag cattatatca tcttttactt aaatttttac tcaaatatta
     5401 ttatttttat acttaaccgt aaataaatat acacttaaac ctaaaagaag caagctcact
     5461 ccaccgataa gataaatcgc ataaatcatc tgagaaagat caccaatagc aagtttaaat
     5521 accaacatca aagcttctat agctaaagca atgataatag aacccaaaaa tctcaccatg
     5581 gttttttgaa ttccaccttc ttcttttttt gtccttccta atacttcttg ttcgatcaaa
     5641 gtttttgcca aatcaaaaat agctaaagct aaagttatgg caatggtact ttcaaacata
     5701 tgttctatgc ctatagcttg attatcaaaa agactaaaaa aacctttttg aaataaaaaa
     5761 caagtaatca caaataaaac cagtgcgaaa caaaaataca ccaaacgact aaattgagta
     5821 aaaacaaact caaattttcc tgcttgaata atctttaaaa tatcttcaag cttgatatca
     5881 atacaaacaa caaaaagcaa gttattttta tcatcgtaaa ttggtataga agctgttacg
     5941 caaagttcat tgtttaaaac cgaaggataa ggatcgctca aaacacatcg ttttaatttt
     6001 acagctctat aaaaataaga acgagtactt ctatcctcac cctgccctat ttcatgagcc
     6061 ttatttaagg aaatcgcatt ttctatttgc atgcctgaaa tatctaaaat atacaaagca
     6121 tcaaaaacaa caacttcatg agctatttta tccaaagctg ttttaatcgt ttcaaggtga
     6181 atatcaggaa gtttattggg tagatttctt gttaaaatat aactcatata agctctagca
     6241 cgatagcgat tatcttcaaa tctttgtata tcttttatat acattatatg ccttctttat
     6301 tgtgtttaaa ttcaggtaca atctttaata aagcctctga aatatcttca catatttgta
     6361 aattttctat ctctttatta agccaatcaa gatcaacctt ctcattcttt gctacaaaaa
     6421 tactctcata ttgggtttta gcatcatttt catcaatcaa aagctcttca taaagcttct
     6481 caccttttct taaacctgtg attttaattt ctaaatcatt gcgattagaa agtaaaagca
     6541 tttttttagc taaatctatg attttcacag gcttacccat atccaaaaca aaaagttctc
     6601 ccccttttgc gatagctcca gcttgcaaaa caagttgcac tgcctcagcc acaagcataa
     6661 aataacgcac tatatcaggg tgtgttaaag ttaaaggctc attattggca atttgtgctt
     6721 taaatttcgg tatcacacta ccactagaac ctaaaacatt accaaaacgc acacaagcaa
     6781 cttcaaaatt ttcatcactc atacttaaag tataaagctc acaaactctc ttagtgcaac
     6841 ccataatatt tgttggtcgt actgctttat ctgtacttat catcacaaat ttagctactt
     6901 tattttcttt agcactgtcg cataaaattt tggttcctaa aatattattg attactgctg
     6961 aatgtggatt ttgttcgcaa agaggcacat gtttataagc ggctgcatgt aaaataagct
     7021 caggtttata agtttttaat acctcatcta aactttgctt atctaaaata cttaacaaaa
     7081 taggagtaat tttttcttta tataaattta aatcatcatt gatcttataa agattatact
     7141 cactatgatc aaccataata agatgcttag caccaaattt aatacattgc ttacaaagtt
     7201 cactgcctat agttccacct gctccactta ccaaaactac cttgtctttt aaaaaagccg
     7261 ccacagcact atcgtctaaa tcttttggtt ttctagcaag caagtcttct atactaatat
     7321 ctcttgcttc atttcttgta aaagaaaata tttttacatc acaaatacca taagctacaa
     7381 gttcttcaaa aagtttttta agctcttctt gttcaagtct taaagcaata atggcagttt
     7441 ttaccccttg ttctacataa gattttattt tttctttttc ttctacaaca aatttatcac
     7501 aataagtccc tataagctct tttctcgcat caactacgcc cacaggaaaa agccctaaag
     7561 aaccttcttt tgcgcctttt aacaaatgta aagccttaga agttgcccct actacaatac
     7621 aaggagtttc ttcttctttc attttagaag gtttaaaatc cacaagcatt cttttgctaa
     7681 ttcttaaagt acctataaac atataagaaa gaacaaaatc tatcacaata gcacttcttg
     7741 gaaaaggatt aaaaaaatca ctaaaaaaat aaaaaataag aaaaaaacaa aactcagcta
     7801 aaagcaaagc gataaaaatt tttcttgctt cattgaggga aaaaaatctc caagctactt
     7861 tataaattct aaaaacaaac aaaaatgaaa gttttaaaac aagcaaaata atagcagaaa
     7921 ccatcatgcc atgataaaaa atactcggaa tatctccact aaatctcaaa gaaaaagcca
     7981 gataaacact aagtaaaatt aaaacaatat ctgaagttaa aaaaaatgct aatcttttgc
     8041 ttttataaaa aatcatttta agcctttatg ctctttaaga tcagttttga aatttcataa
     8101 acatcatctt tgctcatcgc cgtaccactt ggcaaacaaa ttcctttttg gaaaaataac
     8161 tcactattgc cattaagata agccttagtt cctttaaata cttcttgagt gtgcatagct
     8221 ttccataatg gtcttgtttc tatttgttca tttttcaaat cttctatgag ttttgaaatt
     8281 tttggatgca aagtaatatt tttttgactg atatttatat ctttttgaca agcattaagt
     8341 tcatttttat caaaatcaat caaagctgta cttaaccagc gattacttct tgaattttct
     8401 aattcatcta aaaagctaaa atactctcct aaaaattctt tataccactc ataaatttct
     8461 ctttttttaa gcactctttg ttctaaaacc tccatttgtg ctacaccaat agctcctaaa
     8521 acattgctta aacggtaatt ataaccatag tctaaatgtt cataatgcaa acaattttcc
     8581 ctagcttgag tgctataaaa tcttgctttt tcaatctttt ctttattttt tcctataagc
     8641 atacctccac ctgaagtggt gataatttta ttgccattat aagaataagc tccaaattct
     8701 ccaaaagttc ctaaggcttt attcttataa aaacttccta aagcttcagc agcatcttcg
     8761 attaaaacaa tttcattttc cttgcaaatt tcaacaattt catccatttt agccgcattg
     8821 ccataaagat gagttaaaat caatgctttt ggtttttttt cacattcctt aatagcaagt
     8881 tttaacaaat ctacatcgat attataagtt tcatcacaat ctataaatac aggttttgct
     8941 ttaagataac aaataggcgc cactgaagcg ataaaagtaa aagaagaagc caaaacaata
     9001 tcatcttgtt ttacccctgc cacccttaaa gctaaatgca aagctgctgt agctgaattt
     9061 aaagctaagg cattttcact tttgctataa tcttttacac tttgctcaaa gcgatttaca
     9121 aattcaccca aaggtgctat ataattgctt ttgaaaactt cttctatata ttttaattca
     9181 ttaccgccca tatgcggagg agaaagaaaa aatctcatga tttatccttt gtataaaaca
     9241 aaatttttat aaattaactc tattttacct aaaaaaattt acaaagaatc aaacaaaaat
     9301 ctttttataa tcatttcata tttttctttt tgcaggcact cccacaaaaa cacctttttc
     9361 attttggctt ttaaccaaag ttgctccacc acccaaaata ctatcatctg ctaagcttaa
     9421 attaggcaaa acacaagaat taatccctaa aaaacaattt ttaccgattt ttacattacc
     9481 cgcacattta gcccctacgc ttacatgaga aaattcccct atcacgcatt catgctcaat
     9541 cacacttgaa gtatttaaaa tcacgccttt ttctattttg gctttagcgt taatcactac
     9601 atagggcata attaaaatcc ctgcattttc ttccacgctt gcactaggac ttataagtgc
     9661 acttttatga ataagattaa ctattttaaa gccattttct gaaatttttt gataaatctt
     9721 ttttcgaatt tcattgtttc ctatagctat aaaaaaatca tatttaggca aggtgttttc
     9781 aaatttcatt cctttaaaat catctaaaaa aatacattct ttatagccca tatttttagc
     9841 cacatcttca caaacaagcc catgaccact agcaccataa atataaattt tttcagttct
     9901 tgccattaaa tttctctgtt gtaacatggc cttctttgct taccccgctt cgttttaaaa
     9961 cctttaaagc tgttaaaaac atgattttta aatcaagcaa aaaagaaata tttttcacat
    10021 aatacacatc aagttcgaat tttttctgcc aagaaatagc atttctgcca tttacctgcg
    10081 cccatcctgt tatacctgga cgcaccttat ggcgcaattt ttgctcttca ttataaaggg
    10141 ataaatactc aaccaaaaga ggtctaggcc ccacaaaact catatcccct tttaaaacat
    10201 taaaaagttg caaaagctca tccaaactta agcttctaac aatttttcca aaggctttca
    10261 aacgcaattc atcgcttaat aactcaccct tctcatctct ttcatcgctc atggttttaa
    10321 atttataaat tttaaaaatt ttttcatcta acccagggcg attttgagtg aaaatcacac
    10381 ttccttgagt gatttttaaa agtaaagcag tgattaaaat caccggagaa aaaagtacta
    10441 aaagcactaa agctaaaata aaatcaaaaa ttcttttaaa aactttttca tacattctta
    10501 attaccctat cataaagttt taaataacgc tgtgcgatat tattttcatc gtattgtaaa
    10561 gcatcttggg cagcattttt agctaaattt aatcttaatt tttcatcttc taataaaagt
    10621 gaaatttttt cgcttaaatc cttagcattt tttgtttttg cccaaagtcc atcataagca
    10681 ttagaaatag cctctacaca accttcacaa tcactcacca ctatagcctt gccacaagct
    10741 tttgcctcca aaacacttac aggaaagcct tctttatagc ttggtaaaac aaaaatatca
    10801 caattttgca aaagctcgac tatatcactt ctagcaccca aataatgcac cacacccgag
    10861 tttaaaaact ccaaactcgc acaagaagga ttttcatctc ttccaccaac taaaacaaaa
    10921 tttgctttgt cttttagcat agtagcactt tcataaaatt cttttacacc tttatgccat
    10981 aaagctcttg ctatcataag aacaataggt tttttatcta tatttaaatt tctccaaaaa
    11041 agctcttttt tttccgattc tatataaata ggaaaaaatt tttttaaatt gatccctacg
    11101 gattttatca cacaaatttt attttcctta agtcctaaat tccgcataaa ctcggcatta
    11161 ctttcattga caaaaataaa ttggtgtgca aatttaaaac ttaatttata aagattatta
    11221 ataacaaaac gtactaaatt tgccttaaaa ccttgatcta tataaaaaga tcccaagcct
    11281 tctaccaaag caaaacgata aggaattttt gcccattttg ccgctaaaat tccaaaggta
    11341 ttgcttttgt gtgccgcact ttgaataaga tcaagattta aattttttaa aaccttagca
    11401 agataaaaaa aattctttaa aactacaaaa ggatttaaac tagctcttga aaactcataa
    11461 acaattactt ttaaaccaag atctctaagt ttttgcgtgt attcatcttg cggcactata
    11521 acaaaaactt catcttttct atcttttaat gcttttataa taggcattct aaaatgataa
    11581 atacttgctc ctgcatgtga taaaaatcct attctcattt tcaaccctta aattttaagt
    11641 ttaaaaacct tagcatctct agaattaatc accaagtcaa ataaattctt atcataattt
    11701 cctaaaaaaa acatttgcac ataagcacta ttaaacatgg ttttatccat taaaataaat
    11761 tgtgcgtaag gaatagcact atcctttaaa taaaaaatat aaaactgagc cttatcatca
    11821 attggagtga ttttgtattc accttgttta atagaattaa tctctacgat actatttaca
    11881 gaaaccacat tatcacctat tttaaaactt ctaaaatcat cgcttaaaac cactccgttg
    11941 ctaagataaa tttctccatt tttaacatca agtggataag ctgtgctaaa ggtaaaaggt
    12001 ttatccaaaa ctcctgtatc taaattaata aaagaaaaac tagccaccgt agaaaaaatc
    12061 aaagacattc tagcgggcat ataaagataa atatcacgag tttttggcgt atcgatttta
    12121 aaatcaggtt ttgataatga agctagaaac aaatccacat tgctttgatt ataatctttc
    12181 atcatggctt gcaaaatgtc tgtttttaaa atatcatttt gcggagcata aaagcttttt
    12241 tctgtatatt ctacactaag tcttgccata ttagctgcag cttgttcatc tttgcttaaa
    12301 gcaaaagaag ggaaaaaatt atccttacct aaatgctttc caccatctac taaagttttc
    12361 acatcgctat aataacgcac aggataacca taatcccacc aagttaccac ataatcttct
    12421 ctattggcta tattttttaa ttgatttaat aatgatgctt cattttgaga aaaaactgtt
    12481 ggcgctttat agttgtaaat atggataaat actggagcta aagtcaaaat agttgcaaaa
    12541 acaatacaaa catttgaagt taattggcta tattttttaa ccattatagc cttaaactcg
    12601 ctcaataaaa aaccaaatcc taaggccatt acaggtacag aataaatggt aaatctaagc
    12661 ccccctttta aggctaaaaa cccaagcacc aatataggta aagccataat catactttta
    12721 tgttttctca aaagccatac aaaaccaaac aaagaaaaca aaaaaacaat ttcactacca
    12781 ctaattcttc gcataaattc gctaagatct acattttcaa cttcttgtat ggtttgattg
    12841 acattaaaat acataaagcc ctgcgttaaa ttcgcacttt catcacttct aaaaatataa
    12901 aatttaagct gataaagtat aggatcaacc ccaccactta aaatcaaaaa tatcaaagtt
    12961 gcactaccta aaattcctat aatcataaaa tttaagcgtt tttgctctaa ggcgaataaa
    13021 gcaaaaagta ttactataat ggcactttga taaaaccatg ctatatttga aagagtaaga
    13081 gaagacaaaa tcacagctat ataaaaaatc ttttcttttc tatgaaaaat aagtgtataa
    13141 attaaaaaaa gtccaattaa agctacattt aaagtataac ttgaaggata ccaccaaaga
    13201 taaattccta taaataacgg caaggcaatc aatgaaaaaa agtctttttt taaaatcatt
    13261 cttaccataa aaaataaaat aaacataggc aaaacaatta ccagcatatc cgtatcataa
    13321 tacccactca tagtgcgatt ataataactg tttgctatac ttgctaaaag agcagctaca
    13381 aagcccatta aaggacgttt gtattcgtta gctagcaaaa tagtaggaat caccaccaaa
    13441 gaagataaaa aagtactcat atataaaatg atactttcaa aagaaaaagg tgtgatttta
    13501 taaagccaat aagtaagcgc ggataaagaa gatccataat aactcaaatc attaggctga
    13561 tgaaaacctg ctatcatatc tcttgcgccc tcagcaaaag catagccatc atttgaaatg
    13621 atcattaact gattattgaa aaaatactca ttaaactcac ttgcccacca aacccaataa
    13681 aacctgcaaa atacactaaa aacataagct aatataatca tcgcaaacaa aactaaataa
    13741 gggtttttta aatactcttt tttcaacatc ttttatccta ataaatattt caaagcatcg
    13801 cgtgcaattt ttactttatc aaaagcttta gccctagttt tagccttatt tttatacgct
    13861 tttcttaatt tatcgtcttc aagcatagtc tttaaaccct gaaacatgga gttttcatta
    13921 tctacttcta ctaaaagtcc aaattcatca tcgccaaaaa gctctcttgc gccactttta
    13981 tgatcagtgc aaaccaccgc acaagaacaa gctaagcttt caattaaaac atttgaaaag
    14041 ccttcaaata cagaagcaaa agcaaaaaat tcgcatttag ccatgtattt ataaggatta
    14101 ttatcaaatc ctaaaagcaa aaccttttct tctaaattta actctttaat caaagctaaa
    14161 agctcatctt taagcacacc ttcacctaaa atcacaagct ttaaatctgt tttcaatctt
    14221 gcataagcac gaattaataa agcatgattt ttacctttat caagcctgcc tacacttaaa
    14281 ataaatttat cttttaaagc tacatcttca agagcttttt gctctatatt ttctaaatcg
    14341 atggcattgt ataaaatttc acattttttt ggatttatac taaaattttg cactaaatct
    14401 tctaaatttc ccttagaatt aggcaagatt aaatcagctt ttgggtaaag caaagaaatt
    14461 aaaaatttat ttgccaaaga attaaaatta tttttcgcat acatcacact tggcgtagtg
    14521 cattcattga tcacaaggcg agttttgttt ccaaacattc ttgccattaa ggctatataa
    14581 ttaggtcgat ttaaaaaaac aaattctgta tcaatgccta aatttctgca aagtttttta
    14641 tattttaaag ccaaaaaagg tagttttaaa aatttcaaaa taggattttc actaggtttt
    14701 gaacattcta aaaaatgaat ttgacactct ggaatttcat aagaaatttt atcattcatt
    14761 aaaatcaaat gcacttcaaa tttcaaactt aaaataggca ataaagtcgc cacaactctt
    14821 tcagcaccac cacttcctaa agaataaata aaaatgccta atttttgcat aaagccaccc
    14881 gaatttttga taatttttca atcatattat ttggaattat acttaaaatg agtaatatca
    14941 aagcaggagc gttgattttt atactcaggc ttttaaacaa acacttataa agagctttat
    15001 aattttttgc aagttttgca taataagctg ccattttata ataactcgca caagtttttt
    15061 tataatcttt atccttactc attctaagtt cattttctaa aattttagca agctctaaat
    15121 atcccaaata caccctatga gcatttttac tcgcccctaa agtcacgcta tcttgcctaa
    15181 aaatcctata aatcctaaaa gccttatgga tataaaaact tttttccttg tataaattta
    15241 cccaaagcgt ggcttcattg ccataaaatt cttcattaaa acgcttgttt tcaagtagag
    15301 attttttaaa aacagaaaaa aactctccgc taaatttagc cattaaaaaa tcttttttag
    15361 aaatttcact atctttttcc aagcccttac cgctaaattc cttgcttaaa tttccttctt
    15421 tttctatcaa acaatttcca aaaacatgag cataaccctc atttgctttt tgcatcaagg
    15481 tacttaaagc cccagataaa agctcatcat catcatctaa aaaagttaca aactcgccac
    15541 ttgcttgatc taagccattg tttttattgc catttgggcc ttgtttgtaa ttttgattta
    15601 aaaaatactt aatgcgatca tcatcttttt gtaaattttg caccacactt ttagtatcat
    15661 cactagaatt atcatcgctt acaatgattt ctaaatcttt aaaatcttga ttttgtatgc
    15721 ttttaatagc cttttctaac aaaacttgac gattaaaagt tggcactata acagaaagtt
    15781 taggcatttt taacctcgac tataagctta agccattctt ctttgatgtt agaaatttca
    15841 aagtctttac acctttgttt ggcattattt acaagttctt ttctaaaatt ttcatcattt
    15901 aaaacaagtt caagtttttt agcaagtgct atttcatcat cacaacctac caaaagccca
    15961 tcatgattat ctttgattaa atccttagca ccattataat aagaacttga aattctacaa
    16021 acctcaaaat acaaactttc aattaaaacc gttggcaaac cctctacaaa agaacaaagg
    16081 caaagcactt ttgctttttc ataaagagcc ttgacatttt caacgcgtcc taaaaaatca
    16141 acttttattc ctaaagattt taccttgtat tcaagttctt gccttaactc tccatctcct
    16201 gctataacaa atttataatt ttcttgcaaa tttttatcca aatgtgctat agcttttaaa
    16261 aacattacag ggtttttgtt gtgatctaaa cgccctataa aaagaaccaa attttctttt
    16321 tcaaaactag aatcaaaagg aatttcatcg ctaaaatgac aagggtttaa taaaagctta
    16381 acccttttta caaatctttc ataatacacc ttatcactgc ttccaagcac acttaaagca
    16441 tcacaaaaag gatagcttac ccttcttaaa aaacgccaag ttttaggttt taaatacgct
    16501 tcattactat gctcgctaat gatgagtgga gttttaagtc ctatattagc tagaatacaa
    16561 gcaatattag ttgtatccaa aaaagaaata aaaacatcag ccttactttc ttttaaagcc
    16621 tttcttaagg caaaaaattt cttaaaacga cttgcgattt tatgataaag cgtgtcaaat
    16681 ctaaattgtt ctaaacttgt aactttaact tcattttcaa gcttataaaa agattctcct
    16741 gtatgaaatt taataatact tacttcatgc tctttgcaaa gcgcattagc taaggttact
    16801 aaaacacgct cagcgcctcc tgaatttaaa gttgcgataa taaagcttat tttcatcatt
    16861 tctcctcttt aagcttaccg tgttctaaac gataaacctt atcacattgc gttatcgtag
    16921 aaaggcgatg tgcgataata atcatggttt tatctttaga aattttataa atttcatcca
    16981 tgatttttgc ttcactttga gtatcaagcg cagaagttgc ttcatcaagc actaaaattt
    17041 caggctctaa atacaaagcc cttgctatag ctatgcgttg tttttgtccc ccgcttaaat
    17101 tactcccccc atcgcctact tttgtctgaa ctccttgagg taaatttttt ataaaatgct
    17161 ctaaatttgc ttgtttgata accttattaa gtttttcttc atcaaccgca tctccaaaag
    17221 tgatattttt agctatgcta tcattaaaaa gatagatatt ttgcgggata tagcctattt
    17281 tttggcgata attttttgca ttacttgcat ttaattcttg cttatcaatt aaaatttgcc
    17341 cttcttttgg ttttaaaagt cctatgataa gatctactaa ggtacttttt ccacaaccac
    17401 tctcccctat aaaagcgatt ttttcacctt ttttaatgtt taaattaaga tttttaaata
    17461 aatatttttt tccctcataa ccaaagctaa gattgcaaat tttaagctct tgattaaaac
    17521 ttaattttcc ctcgcccaaa ttttcttctt cttgtcttaa attttgataa ataatattca
    17581 aagaagaatg ataataaagc aaatcatgat aacttgtgat aatacgattt gcgcttggca
    17641 ttaagcgata aagcgctaaa acaaaaatag aaatcgtgga taaaatacct gaaatatcac
    17701 tttcattttt caaaaccaaa aataccacga taaaaacaag cacacaaaag cctattcctt
    17761 caagataaat tctaggcacc gcagctacgc tttcattggt aatatttgct ttagaaaaag
    17821 cttcactttg tgctttaaaa agacttaata ctccatcttc tttggtttta agcttgataa
    17881 atttaaaatt atttaaattt gtatttaaaa tttcgaagaa atttttcatc gcttcttcgc
    17941 gtcttagtcc tgctttttta atgatagggc ttaaaatttt cactaaaata aaagcattta
    18001 acaccataaa aatacttaaa aataaagtga ttttataatt aatcaaaagc attaaagcat
    18061 aaagcaaaag cactacaaaa atttcactca tcaaaagtaa aaatgatgaa atcatagtgc
    18121 ttagattata aacttcccct gtaatggact ttaaaatttc agattgattt ttttgagtaa
    18181 atttttcata attaatattt aaaaatttag aaaaaacctt ataagcgatc gcatgataac
    18241 gtcctttaga aaatcttgcc aaaagatgaa aataatacgc atttaacaaa gctctaaata
    18301 cataaaaaac aataagcccc actccaaaat aaacaatgat ttcaaaaaca gggatattaa
    18361 gatattcttt taggctgatt aaatatttat tacgatcaaa ataagaaaaa tcactagcca
    18421 aagtgataaa aggcattacc aaagaaatcg caaaagtttc tataaaagaa acaaatactg
    18481 aaaaaacaag caagaaaaat aaaaaatttt tatcttcctt gcttaaaata aaaaaaagtt
    18541 tttttagcac tgtttttccc aatcaaaagc agatttacaa ataagcccta aatcatcata
    18601 tttaggctgc caagaagtaa gatttctgat tttacttgca tcagaaatca atacactagg
    18661 atcacccgca cggcgtgggg caagttctac tttaaaatcc actccgctaa cttttttcat
    18721 cgcttcaatc acttctttta cgctaaaacc atgtccataa cctacattaa aaacattgct
    18781 ttcattctct tttaaataat ccaaagccga taaatgcgca cttgaaatat catccacatg
    18841 gataaaatct cttatgcaag tgccatcttt tgtatcataa tcatcgccaa atatgaaaag
    18901 tttattacgt tttcctgcgg cacattcagc tgcaactttt ataagcaaag tcgcttttgg
    18961 atagcgttgt cctaaagtat aatccatgca agcacctgca acattaaaat atcttaaaat
    19021 acaatgctta aattcaggat ttgccatact tgcatcacgc aaaacctctt cgctcataag
    19081 cttactacgc ccataaggat taataggtgc taaaggactt gtttcgctca caacgggagt
    19141 ttgtggttcg ccataagtgg ctgccgttga agaaaatata aatttattca ctccagtttg
    19201 caaacaagtt tcgatgagat ttgtcgtatt aacagtgtta ttcatataat actttaaagg
    19261 gttttgcata ctttcaaaaa cttcaatgct cgctgcaaaa tgcacaatag cgtcaaattt
    19321 ttctctctca aacaatgctt ttacgccttg aaaatcactt aaatcttgtt caaaaaattt
    19381 aaaagttctt attttttgca aatcttctat tgcgatttta gaacccttag aaagattatc
    19441 taaaacacaa atttcatgat ctgtttttaa aaattgtctt aaagtatgag aacctatata
    19501 acctgcacca ccgctaataa gaattttcat catcattcct ttttctaaaa aatatcaaaa
    19561 ataaatttta atatattttc ttaaatactt aagattgaac ttttgaaatt tcactctcac
    19621 aagcttttgc aaaaacttct gtataggaac gatctgattt ttttgcacgc aaaaaatctc
    19681 tcatataaga aagaaaatca atataatctt cttcactaac attagcttta ataagttcat
    19741 attttaaaaa aagcatataa gtatttaaaa catcactttc acaatattcg tgaatttttt
    19801 caagttcatt ttcacaaaaa agtttcatca cctcatcgcc atgcacatca tattttcctg
    19861 gtaaacccac catagaacaa agtgtatcaa gctttattcc acgcccatta gatcctaagg
    19921 attctaataa atcgcaatgt tttaattctg aaaatcttgt tttataatta ttccatttat
    19981 cgctttgagt atctaaataa gttgctgctt ttaaattgta ttttaaagcc cttaaaacaa
    20041 gaacaggcat atcgaaattt ttaccattaa agctgactaa ttttggctca taattttcta
    20101 taaaattaaa aaaattagca atcatttctt tttcattttg cccatcaatt ttatttactt
    20161 tgataaattt tccaaaatta tcacttaaaa ccgcacaaat actgatgatt ttatgataag
    20221 gcaaaggcaa aaactcactc ccactttgtt ctttttgcca ctgaagtgct tttaaactta
    20281 cctccaaatc acttccttca aaacccaaag ttttgcgaat aagctcaaca tctggtacac
    20341 tctcgcaatc aaaaacacaa atataacctt cattttttgc catttttaac ctttttttaa
    20401 ataatttcgc taaaatcata gcaaaaattt taaaatatta ggcttttaat gaaaatagca
    20461 attgttcgtt tatcagcact tggtgatatt atccaaagtg ccgtggtttt gcaatttatc
    20521 aaaaatttta aaaaagatat agaaattcat tggtttgtag atgaaaaatt tgaaggcata
    20581 cttaaaaacc atcctttaat agacaaactc tatgccctac ccttaaaaga caaaaaaatt
    20641 ttaaaaagcc taaaaattct tcttaaagca agaaaaaaca actataatgc agtaatagat
    20701 ctacaagggc ttataaaatc tgctattgta agtcgaattt taagtagaaa taattttggt
    20761 tttgataaaa acagccttaa agaaagtttt gctcataatt tctacaacca aaaacttgag
    20821 ttagattaca atgaaaatgt atttgtaaga tacttaagtc ttacctcctt tatgttaaat
    20881 actgatttta atgtcaaaaa tttagccttt aaacaagata tttttagcgt agatgaaaat
    20941 ttaaaacaac tcttaaacaa taaactcaag ctcgacaaaa acgaaaaaaa catactcata
    21001 cacgtaggtt caagtgtaga aaataaaatc tatcctaaaa ccaaacttgc tatactttgc
    21061 aaacttttaa tcaatgaatt tcaacaagca aaaatttggc tcgcttgggg aaatgtaaaa
    21121 gaatacgaat ttgctaaaga ggttttaaat cttagtggta ttgatgaaac acatatagaa
    21181 ttagcgccaa aattcaatct tgaagaacta atggctttta caaaaatgat ggatcttatc
    21241 ataggaaatg atagcggccc aacacatttg gcttttgctt taaataaggc atctattacg
    21301 atttttggtg caacaccaag ctaccgcaat gcttttcaaa ctcatatcaa taaaatcatt
    21361 gatgcaggta aaaaaatcca aaataccaag catatcgata aaagtgattt ttgtatcacg
    21421 cgtatagaag aagaagatat cttcaaactt gccaaaggct tacttaatga aaaatagtga
    21481 tagaatatat cttagtcttt attatatttt gaaatttttt gttactttta tgcctgagtg
    21541 tatcttgcat tttttagctt tgattgtagc aagaatcact ttttatctta acaaaaaaca
    21601 tcgcaagatc atcgatacaa atttgcaaat ctgcttccct caatacactc aaaaagaacg
    21661 cgataaacta tctttgaaaa tttatgaaaa ttttgctcaa tttggaattg attgtttaca
    21721 aaatcaaaac accaccaaag aaaaaattct caataaagta aattttatca atgaaaattt
    21781 tcttatagac gctctagctt taaagcgtcc tattatcttc acaactgcac actatggaaa
    21841 ctgggaaatt ttaagccttg cttatgcagc taaatatggt gcgatttcca tagtgggaaa
    21901 aaagttaaaa agtgaaatta tgtatgaaat tttaagccaa agtcgtactc aatttgacat
    21961 agagcttatt gacaaaaaag gcggtataag acaaatgcta agcgctctaa aaaaggagcg
    22021 agctttggga attttaactg atcaagactg cgtagaaaac gaaagcgtaa gattaaaatt
    22081 ttttaacaaa gaagtgaatt atcaaatggg agcaagcctt atcgcacaaa gaagcaatgc
    22141 tttgatcatc cctgtttatg cctataaaga agatggtaaa ttttgcatag agttttttaa
    22201 agcaaaagat tctcaaaatg caaacttaga agaactgaca ctttatcaag cacaaagttg
    22261 cgaagaaatg attaaaaaaa gaccttggga atactttttt ttccatagac gctttgcaag
    22321 ttataatcaa ggaatatact catgaatatt tcaatagtaa tactaacttt taatagccaa
    22381 aaatatcttc aagaagtatt gcaaagtgtt aattttgcca atgaaattat tttaatagat
    22441 agcggaagca cagatgatag tttaataata gcaaaaactt ttaaaaatgt gaaaattttc
    22501 catcaagatt ggcttggttt tggaaagcaa aaacaatttg gagttgaaaa agcaaataat
    22561 gattggatat ttgttttaga tagtgatgaa gtttttactg aagaattaaa agaggaagta
    22621 ttgcaaataa ttaaaaatcc atcatttaaa gcatacaaag tagcaagatt aaattttttc
    22681 tttggagaag caataacaaa aatggggcta tatcctgatt ataacataag actatttcat
    22741 aaaaaatatg ccaaatttaa tgaaagagaa gttcacgaaa gcataatctg tcaagaaaaa
    22801 atagggaaat taaaacatca ttttttacat tatgcttatg aaaatatcga gcaatttata
    22861 gataaacaaa acaaatactc aagtctaaat cctaaaaaaa ataaccttct taaagcttta
    22921 ataaatcctt attggacttt ttttaaactt tattttgtaa aattaggttt tttagaaggc
    22981 aaaagaggtt ttatcatagc aaagctttat gcacaatata ctttttggaa atatattaaa
    23041 taggagtgca acaatgaaag gcattatttt agctggaggt agtggaacta gactttatcc
    23101 tagcacatta actttatgca agcaactttt acctatatac gataaaccaa tgatttatta
    23161 tcctatatct gttttaatgc ttgcaaaaat taaagaagtt ttgattattt ctactccaaa
    23221 agatattgat agatttaaag agctattcaa agatggttct tttcttggaa tgcaaattca
    23281 gtataaaatt caagagcgtc cagaaggttt agcacaagga cttattttgg cgcaagattt
    23341 tattcaaaat gatgatattg cattaatttt aggagataat attttttacg gacaaggctt
    23401 tagtgatatt ttggaaaatg caaaagatga cttaaaaaaa gggtttgcta gtattttttc
    23461 ttatcatgta aaagatccag aaagatttgg agtggtagaa atggatcaaa atggaaatgt
    23521 tttaagccta gaagaaaaac ccaaaaatcc aaaaagcaac tatgtggcaa ctggtttata
    23581 tttttataat aatgacgcta tagatattgc aaaaaatata aaaccaagtg caagaggaga
    23641 acttgaaata acagatgtaa atatagaata tttaaggtta aataagctaa aatcacaaca
    23701 tttaggaaga ggttttgctt ggattgacac aggaactcac gatagtctta tagaagctag
    23761 ttcgtttgtg caaaccatag aattaaggca gggttataag attgcctgct tagaagaaat
    23821 agcctacaat aacaactgga tagataatga aaccctagaa aaaagagcat tgttactttc
    23881 aaaaagtaat tatggtcaat atttatataa aatacttagt caaggaaaat aatgtatatt
    23941 ttagttactg gcggagctgg ttttataggt agtaattttt tattatattt ttttgagaaa
    24001 aatccagatg ctaaaattat aaatttagat tttttaacat atgctagcaa tatatcaaat
    24061 ttaaataaat taaaaaataa tcctaattat gtatttattc aaggagatat aagtgatgtt
    24121 tttttggtta atgaaatttt cagcaaatat aaaataaatg cggttataaa ttttgcagca
    24181 gaatcacatg tagataattc tataaaaaat ccagatattt ttataaaaac aaatatatac
    24241 ggaacttgga atttattaaa ctcagcttat aaaacttggt ttctcgaacc ttttcttaaa
    24301 aaagacgaat ttaaacaaag tttcttttat caaataagta cagatgaagt ttatggatct
    24361 ttgggagaaa atggaaaatt tacagaagat aacgcttatg ctccaaattc cccttattca
    24421 gcttcaaaag caagtgctga tatgcttgtt agaagttatc atcatactta tggattaaat
    24481 gctgttattt ctaattgttc taacaattac ggaccttttc agcatgatga aaaacttata
    24541 cctaccataa taagaaatgc attaaataac gctcaaattc caatatatgg agatggtaag
    24601 aatataagag attggctata tgtaaaagat cattgcgtgg ctatagaaag tatttataaa
    24661 tatgcttttg aaaagataaa agaaaataat agcttttttg atgtatttaa tataggaaca
    24721 aatgaagaat ggcaaaatat agacatagct aataaaattt gttcttattt agataatgta
    24781 ttgccaaaaa atacttctta taaagagcaa attacttttg taaaggatag agcaggtcat
    24841 gatagaagat atgccataga tccgacaaaa ttacagaggg ttataggttg gaaagcacaa
    24901 gaaaatttta atagcggttt agataaaact atacaatggt atattaaaaa atacaagggt
    24961 taaatttgaa ctatacaata ttaaaattca aaaccataaa tagtaaaaat tcaatattaa
    25021 atgtccatca aaaagatgta aattgtccat ttgaaattaa aagaattttt tatatatatg
    25081 attttttaaa tgattcaata agaggtgatc atgctaattt aaattcagaa tttattttta
    25141 tagctttaaa tggaagttgc gaaattttaa tagacgatgg acaaacaaaa caaaaaataa
    25201 tattaaatga taaaaccaaa ggcttatata tagataaaat gatatggaaa caaatgtata
    25261 atttttctaa agattgtatt ttattggtat taacaaatac ttattatgat gaaaaagagt
    25321 atatttatga ttataagtat ttttgtgaat taaaaaataa tatagggcgg cggggggggg
    25381 tatgctataa aaatcatgcc ttaaaagtgg catgaaaaat tataaaattt taaagttaga
    25441 tgccataaaa gatgatagag gtaaattagt agctttagaa agcaataaag aaattccatt
    25501 tgagataaaa agggtgtatt atatatttga tacagatcca aattttccaa gaggagcaca
    25561 tgcacataaa aatttagagc aagtgcttat aatgatgagt ggttcttgtg atatagtact
    25621 aaatgatgga aaaaattgtg aaaaaatttg tttaaatcgt cctgatatgg gtctttatat
    25681 aggtaaaaat atgtggagag aaatgaaaaa tttttcttat ggagcaaaat tgctagtttt
    25741 ggcaagtgat ttttatgatg aaaaagagta tataagaaat tatgatgaat ttttaaggaa
    25801 tattaatgat acataaaatg tcagatgtac aaagtagtaa tataggtaaa aatacaaata
    25861 tatggcaatt ttgcgtagtt ttacctaatg ctaaaatagg agataattgc aatatatgtt
    25921 ctcattgctt tatagaaaat gatgttgtga ttggagataa tgttacgatt aagtgcgggg
    25981 ttcaaatatg ggatggtata acaatagaag ataatgtttt tatagggcca aatgtaacat
    26041 tttgcaatga taaatatcca aaatcaaaac aatatccaaa agaattttta aaaactataa
    26101 ttaaaaaagg cgcgagtatt ggtgctaatg cgacaatttt accaggtgta attataggag
    26161 aaaatgcagt gatagggggg ggctatcgtt acaaaagata ttgcagccaa tacaacttat
    26221 tattgcaaaa ttatttcaaa acaataattt tttacaagga ttatgcaaat gagtgatttt
    26281 tgcataattg gaaaaaatat taatatgtat ttagttgatg acgaagatgc tggatttatt
    26341 tttgaactca gaagtgatgt tgtaaaaaat aaatttttaa acaaaataga taatgatata
    26401 aaaaagcaaa gagaatggat tagattatat aagaagagag aaaaaaataa aaaagaattt
    26461 tattttacaa tcagaaataa aaataatgaa aagttaggcc tagttagatt gtatgacttt
    26521 attgacgatt ctttttgctg gggaagtttt ataataaaac atggggttgc cttttatata
    26581 tccatagagg ttgttatgaa tgtgtatgaa ttcgcatttt ataatttagg ttttaatgct
    26641 agtcattttg atgtaagaaa agataacgat agagttgtag cctttcataa aaaatttggt
    26701 gctaaaatta ttaaagaaga tgttgataat ttttatttta acatttcaaa acaagaatat
    26761 gaaatt
//
LOCUS       DARBAC010000006        25818 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.006, whole genome shotgun sequence.
ACCESSION   DARBAC010000006 DARBAC010000000
VERSION     DARBAC010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25818
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.006"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1300)
                     /locus_tag="SB799_000185"
     CDS             complement(<1..1300)
                     /locus_tag="SB799_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HEG0867454.1"
                     /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSNPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELAGQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEITVKNNNENFDY"
     gene            complement(1318..2013)
                     /locus_tag="SB799_000186"
     CDS             complement(1318..2013)
                     /locus_tag="SB799_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867455.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(2000..2770)
                     /locus_tag="SB799_000187"
     CDS             complement(2000..2770)
                     /locus_tag="SB799_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867456.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
     gene            complement(2767..3819)
                     /locus_tag="SB799_000188"
     CDS             complement(2767..3819)
                     /locus_tag="SB799_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEG0867457.1"
                     /translation="MMVRIKVSHLIFLIASIVFIFVSPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSEK"
     gene            complement(3819..4715)
                     /locus_tag="SB799_000189"
     CDS             complement(3819..4715)
                     /locus_tag="SB799_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEG0867458.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(4734..5843)
                     /locus_tag="SB799_000190"
     CDS             complement(4734..5843)
                     /locus_tag="SB799_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0867459.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSTLSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKTKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(5865..6980)
                     /locus_tag="SB799_000191"
     CDS             complement(5865..6980)
                     /locus_tag="SB799_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0867460.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDNFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLAAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNNPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNACVDNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(7011..7445)
                     /locus_tag="SB799_000192"
     CDS             complement(7011..7445)
                     /locus_tag="SB799_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0867461.1"
                     /translation="MIIRWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(7454..7645)
                     /locus_tag="SB799_000193"
     CDS             complement(7454..7645)
                     /locus_tag="SB799_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HEG0867462.1"
                     /translation="MKKIFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTHRYQNKTQTEITIK"
     gene            complement(7697..8203)
                     /locus_tag="SB799_000194"
     CDS             complement(7697..8203)
                     /locus_tag="SB799_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HEG0867463.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(8212..9243)
                     /locus_tag="SB799_000195"
     CDS             complement(8212..9243)
                     /locus_tag="SB799_000195"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEG0867464.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVV
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(9243..10544)
                     /gene="flgR"
                     /locus_tag="SB799_000196"
     CDS             complement(9243..10544)
                     /gene="flgR"
                     /locus_tag="SB799_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HEG0867465.1"
                     /translation="MNLVIVEDDINMRKSLKIALAEYEEFNIKSYKSATEALKKIDEN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASV
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFVAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGMDIKILNEKIKKYQIKDR"
     gene            complement(10601..11050)
                     /gene="flgQ"
                     /locus_tag="SB799_000197"
     CDS             complement(10601..11050)
                     /gene="flgQ"
                     /locus_tag="SB799_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HEG0867466.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDIKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GAKISVKDIVNTDLLRAQSETYIKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(11026..11541)
                     /gene="flgP"
                     /locus_tag="SB799_000198"
     CDS             complement(11026..11541)
                     /gene="flgP"
                     /locus_tag="SB799_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HEG0867467.1"
                     /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSANSTPPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(11605..14196)
                     /gene="gyrA"
                     /locus_tag="SB799_000199"
     CDS             complement(11605..14196)
                     /gene="gyrA"
                     /locus_tag="SB799_000199"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HEG0867468.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKEKQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFASGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDLQ"
     gene            complement(14237..14812)
                     /locus_tag="SB799_000200"
     CDS             complement(14237..14812)
                     /locus_tag="SB799_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEG0867469.1"
                     /translation="MRCINCGAFALLCFCDLCELELSEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNHIKYSGKSLEFRQKHKRNYKLLKTIQEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADAKV"
     gene            complement(14809..15453)
                     /locus_tag="SB799_000201"
     CDS             complement(14809..15453)
                     /locus_tag="SB799_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867470.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPD
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDATGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(15530..17326)
                     /gene="lepA"
                     /locus_tag="SB799_000202"
     CDS             complement(15530..17326)
                     /gene="lepA"
                     /locus_tag="SB799_000202"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEG0867471.1"
                     /translation="MSVKNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMD
                     TMDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLV
                     VDASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAI
                     CVSAKTGVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGNI
                     AKNDEVLVMSTDKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTI
                     TLVKNKAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSL
                     ALGFGFRVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELVKIQNPSEL
                     PPVNKIDHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPL
                     NEIVMDFYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQ
                     SKGRELVSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRK
                     LLEKQKEGKKRMKAIGKVNLPQEAFLSVLKID"
     gene            17452..18726
                     /gene="cmeD"
                     /locus_tag="SB799_000203"
     CDS             17452..18726
                     /gene="cmeD"
                     /locus_tag="SB799_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HEG0867472.1"
                     /translation="MFEKYLKSAMFLALYPLAMLASNLHEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREA
                     NLRALESKEKLSLLDKEQSKNYLALNAITLYFNTLSLEKILLANQQKVAFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSNTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAP
                     FVNLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
     gene            18723..19463
                     /gene="cmeE"
                     /locus_tag="SB799_000204"
     CDS             18723..19463
                     /gene="cmeE"
                     /locus_tag="SB799_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HEG0867473.1"
                     /translation="MKKILFLLLAFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLTLDQESEKIALQNAQNSYQLALVEYENTKSKMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNKAKINIAYYKNIMTKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVKLGDDFFYKIDQNGTELKGKISLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            19466..22483
                     /gene="cmeF"
                     /locus_tag="SB799_000205"
     CDS             19466..22483
                     /gene="cmeF"
                     /locus_tag="SB799_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HEG0867474.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKVNGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSATLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(22508..23314)
                     /locus_tag="SB799_000206"
     CDS             complement(22508..23314)
                     /locus_tag="SB799_000206"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0867475.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHYIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(23315..24034)
                     /locus_tag="SB799_000207"
     CDS             complement(23315..24034)
                     /locus_tag="SB799_000207"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEG0867476.1"
                     /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCSKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVINKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            complement(24034..24285)
                     /locus_tag="SB799_000208"
     CDS             complement(24034..24285)
                     /locus_tag="SB799_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867477.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            complement(24289..25734)
                     /locus_tag="SB799_000209"
     CDS             complement(24289..25734)
                     /locus_tag="SB799_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HEG0867478.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
BASE COUNT         8908 a         4685 c         3271 g         8954 t
ORIGIN      
        1 tataatcaaa attttcatta ttatttttta cggtaatttc acttgcataa gaagctggag
       61 acatagaacc tggataacga tctaatacaa aatctctcaa ataaatatca aaaggcaatt
      121 gttcataaga aagcgcccaa gaaataaaga atttttgacc cgcaagttct atcataatag
      181 gtttattata ttcaaaaata taaaattctt tactttcatt tttatagctt aattctaatt
      241 ttaaagcatt agagccagtt aattctaagt ttttattctc attgcttaag gcaaaatctt
      301 taaaatgcaa taataaagaa tttttccaat tttgaggctc gccaaaagta gaaatcaaca
      361 tagttctacc cacttctaac caagcagatt taaaccataa ccaaaaactt tcatcttgag
      421 gtctattgga accttctaaa gcttcttgcg catgcaaaga agcagcttta actacaaaac
      481 taatatcatt aatttcataa agccttcttt ccttagcatt tgccttttct ccaattttaa
      541 ggtctaaatt ttgtccatct agcatactta gaaaatgtaa gttttcactt gaacttaaag
      601 ttaaattttc gtcaattttt acaaaaggtg ctttaacatt atcattcata aaagcaaagt
      661 taaccccttc tatattctta acttcacctt tttcaaattt aacatcaaca ccttgagatc
      721 ctttttgaga aagcattaaa accaataaag gattagaatt attattttct ttataagtat
      781 aatgagcatt taagattaaa tctttatatt ttaatacagc ttgatcatca cctaaattaa
      841 gttttagttt aaaagaatta gcaaaaggca aatttcctat ataacgatca ttaaccgcac
      901 tatagcgttc tccatctttt atagcagaaa tgcgcaaaga agtcttagaa ctttctataa
      961 gtgaattttg agtatgctct ctaataggta aaataccttc aaaaccagca tatcttgtca
     1021 ttgcagaacc cactaaaata aataaaaaag aaatatgaaa aatcattaaa ggcaattttt
     1081 taagcccaaa cattttataa cgaaacatcc cgcatagtaa attaatacca agtaaaagtt
     1141 gtatatattc aaaccaaaaa gtatcataaa ccattgccca agccgtagga gttccataag
     1201 cactttcaat aaaagttgcc aaagcacaaa aaagcgcaaa aagcaaaaac aatacaaccg
     1261 aaactcttaa atcccctatg ctttttatta tatttttcat tctttttcct ttaaatttta
     1321 aagccctaaa tatttctttc taatctcatc atcacctatt aaatttttag cctcgttttc
     1381 cattacaatg cgaccatttt ccaaaacata agcataatca cttattttta atgcagaata
     1441 agcattttgc tctaccaaaa gaatagttat accctcttct tttaaacgca caataatatc
     1501 aaaaacttca cccacaatct ttggagcaag ccccaaagaa ggctcatcca acatcaaaag
     1561 ttttggctca ctcattaaag cccttgaaat cgcaagcatt tgcgcttccc ctccactcaa
     1621 tgttccagct aaagcatgct ttttacttgc aagtcttgga aaaagtttat acatttgctc
     1681 tcttaaatgc tcataatttt cagcattatt aaaagcacct atttttaaat tttcctctac
     1741 gcttaaatta ataaaaacac gtcttccttc aggaactaaa gctatacctt tttgaactaa
     1801 agtatgagtt aaatgtcttt tagtatcata acctaagaaa ttaacctcac cagttctttt
     1861 aactgagttt aaaagcgcat ttaaagttga agttttacct gctccatttg aacctataag
     1921 agaaacaata tgacctgttt ccactttaaa atcaatccct ttaacagctt caattaatcc
     1981 ataataaaca tgcaaatctt taactattag catcaaaatc ccctaaatac gcagcaatta
     2041 cttctttatg atttacagca tcgcaaagtt taccttcaaa aattgttttt ccataatcaa
     2101 gtaccaatac gcgatcacac aatttattta caaatttcat atcatgttct ataagcaaaa
     2161 cgctaatttt ataatctttt cgtaatttaa aaatgagctc agcaagttca tcgctctcag
     2221 agctattcat cccagcggct ggctcatcaa gcaataataa tcttggctga gtagccattg
     2281 ctcttgcaat ctcaactttt ctttgttgtc cataacttaa gctagtagcc ttttcatagg
     2341 caaattctgc aataccaagt tcttctaata ttgcataagc cttctcttta aatacttgtt
     2401 ctatttttcc aaaacgccct aaatgcaaaa aggcttcaaa aatattatat ttcatttgtt
     2461 tattaaaacc aataagaaca ttttcaagca cattcatgct tgaaaaaagc ctaatatttt
     2521 gaaatgttct agctattcct aaatgcacaa tcttatgagg ttttaagtgg tcaattcttt
     2581 ctcctagaaa ttcaaccgaa cctgaactag gtttatagtt acctgttata atattaaaaa
     2641 gagttgtttt gccagcccca ttaggtccaa ttaaagcaaa aatttcaccc tcattgattt
     2701 taaaagaagt ttcattaata gctttaacac taccaaaact ttttgaaatt tgttttaatt
     2761 ccaaaatcat ttttcactcc ttttaaaacg ctttttaatc cctctaatca catcactcaa
     2821 ctcataataa cccattatgc cttttcttgc aaaaagcatt actaaaatca gaacaataga
     2881 aaaaacaacc attctaagcc ctggcgttga ttggatatca agatttaaag aatctatttt
     2941 tatatttaac tcatctaaaa atctaagcca ctcacttcca ccaataacta atatcgcacc
     3001 tataatagca cctgtagtag aaccaagtcc gcctaaaaca ataataatca aaagctgaaa
     3061 agtaagtaaa aaatcaaatt gagttggaga tacggtagtc aacagacaag ccaaaagtcc
     3121 cccacctaca ccttctaaaa atgctgaagt gctaaaagct aaagttttta tccaaaaagt
     3181 atttattccc atagcacttg cagcatcttc atcatctctt atagccttca ttgcacgacc
     3241 atatttagaa taaactatat ttaaaattaa aataaccgct acaatagcaa taccacctgt
     3301 ccaataaatc gtggaaaatt gtggaatatc taccagtcct cttgagccat tagtaataga
     3361 aggaaaatta atagcagcta ttttaataat tattccaaag cctaaagtta caatagccaa
     3421 ataatcccct ctcacgcgaa atacagcaaa agccaaaatc agggcaagta aagatgaaca
     3481 aattccagct acaattaaag ctagaataaa ggaatttgaa tggatggcta aaataaaaga
     3541 actaggacca tctaaaaaaa actgatcatt tttcgcatca gcacttaaaa gaactaaagc
     3601 agccgcataa gctccaattg caacaaatcc attgggttct agtgaaaatt gtccagttac
     3661 accattaata aggttgtaac tcacagccaa aataataaaa atagcaattt gattaacaat
     3721 gtttaatcca tagtccccaa aaatataagg agaaacgaaa ataaaaacaa ttgaagcaat
     3781 taaaaagatt aaatgtgaaa ccttaattct aaccatcatc aaaacctact cttttcaaaa
     3841 tttataccta aaattcccgt aggtctaaat aacaatataa acaccaaaaa aataaaagca
     3901 aatgcatctt taaagcctga taaatctgga aaaaaagcca caacaacaac ttcagtaaat
     3961 cctataataa gtccacccaa aactgcacct actacagaac ctatacctcc taaaactgca
     4021 gcagcaaaag ctttcaaacc tattaaagtt cccatagtag gttcaacaga gtaataattt
     4081 gcagcccaaa aaacaccccc aactgctgcc aaagctgaac ctagggcaaa aactatagca
     4141 ataatacgat ttgcatctat acccattaaa tttactgttt gtatatcaaa tgccaaagca
     4201 cgaatagcta taccatactt gcttttatac aaaatccata acactgctat taaaataaca
     4261 aatgtaagag caggaaccat taaagaacca taagttgtta tcactccgcc aaaattaaca
     4321 ctttcctcaa aataacttgg cggtgtaaaa gttctaggtg ttgaagtaaa aagcatatta
     4381 aaaagatttt gcaagaaaaa actaatacca attgctgtaa tcaacaatga aattctagga
     4441 gcctgtctta aaggtttata agcgattcta tctgtagcta ttccaacaca ggcagcaaaa
     4501 atcattgcca aagacaaagc tcctagaaaa ggaacattta gattagtcat gcaaaaaaga
     4561 gctgcataag caccaaccat cataatatcg ccgtgagcaa aattaataag tcttaacacg
     4621 ccataaacca tagtatagcc aacagcaata agggcataca tactgcccaa actaagtcca
     4681 ttaacaagtt gttgtaaaaa taaagtagaa tccataatct ttctattttt cctttaagga
     4741 ttgataatat ctttataatt ttgcttttga tttttaattt ctttaaccac tacagaacga
     4801 gttgcatttc ctgtttgatc aatactgata acaccagaaa caccttgata atttttagtt
     4861 tggtgaattt tttcattgac acacttacta gtaagatttt caacgcaagc attcatagca
     4921 tttaacatta caaaatacgc atcagccccc atagctgaaa aatttggaac ttcttttgtt
     4981 cctttagttt tttcataaac actgataaat tctttgctta attttgtagt tggattatta
     5041 gcatcaaaac tatctgtgaa aatataaccc tcgcttgcat ctccagctaa actaataaaa
     5101 gtttgatcag caactccatc tgcagaaccc ataggaatat ttaaacctgc gagttttgat
     5161 tgtcttgcaa ataaagaagc ttcactataa taaagcggta aaaaaataaa ttctggattt
     5221 aaacttttaa cttgagctac aatagctcta aaatctttat cacctgaatt aactcttaaa
     5281 attctaagaa tttgaccgcc attagacttg tactgttttt caaaagcttt tgctaaacct
     5341 aaggaatagt cagtgctttg atctactaca ataacagcac ttttgtaatt aagttttgaa
     5401 aaaacatatt ttgctaaaga tgaaccttga aaactgtcca taaaacatac tcgagaagaa
     5461 tatatttttt tatcaagcaa tctatcacca gttgcagcag gagcgatcaa tggaatttta
     5521 ttatcttctg ctacgcgcat aacttgcaat gtattagcag taaccatttc ccctataaga
     5581 cctataactt tatcttgaga aactaaacga tttgctccac tcgaagattc taatttatca
     5641 cctttagtat caataatagc aagagaaacc ttatctccat tacttaaagt tgattgcatt
     5701 gaatttgcaa gtttaatccc ttctagtgca ctttgtccat atgctgcagt agctccgcta
     5761 agtggtaaaa caactcctat tttgacttcc gcagcactta aacttaaact tagaatactt
     5821 gctaaaatta aacttttttt cattctctac ctttatttta gtaattatgg atttataatt
     5881 gttttataat tttgtttttg attttgaatt tctttaatca caacagaacg aatggcatta
     5941 ccgctttcat ctatgctaat cacaccacca acagcttgaa aatctttagt ttgatgaatt
     6001 ttactattaa tacattcgct gctaagatta tcaacgcaag cattcatagc attcaacatt
     6061 acaaaatacg catcagcccc catagccgaa aatgctggaa gttcttttgt tcctttaact
     6121 ttctcataag ctgcaacaaa atcttttcct aattgtgtag atggattgtt ataatcaaaa
     6181 ctatcagtga aaattactcc attgacagca cttccgccaa gatctataaa agtttgatta
     6241 ttaacaccat ctcctgctgc taaaagttta tcaaaaccaa tttgtcttgc ttgtctcgca
     6301 attaaagcag cttcaggatg ataaataggc atataaacaa aatcaggatt taaactctta
     6361 agttgcgaaa ccacagctct aaaatcttta tctcctgaat taataacaag tttttttata
     6421 attttcccac cattattctt aaaagaattt tcaaaagctc ttgccaaacc taaagaataa
     6481 acattgcttt gatctatgat gataacagca tttttaagtc ctaaatcctt agatacataa
     6541 gtggcaaatt tatctccttg aaaattgtct ttaaaacaaa ctctacttgc atatttcttt
     6601 ttatctagca atttatctcc agatgccact ggagctatta gaggaatttt tttctcttct
     6661 gctatagaaa tagcttgaat ggtatttgga gttgtagctt ctccaataat cccaaggact
     6721 ttatctgttg ctattaaacg attaactccg tttgaagttt caagcttatc tccttttgta
     6781 tctattgtga taagtttaat aacatctcca tttgaaagtt ttggctgtag cttattagcc
     6841 agttcaattc cgttaaaaac atcttgccca taagctgcca cagttccagt taaaggtaaa
     6901 actactccta tattaatatc cttagcatat aagcaattta ccatagttaa aacacttaaa
     6961 gttaaagtta gttttttcat agcattcctt ttaattatag tttttacatt ttattttaga
     7021 aatatattat gttttgtttt ttgcgcaggt tcttcttcaa gaagatcttt tacttgcaaa
     7081 tcaagcgcaa aatttccacc tttaatataa gcaataatat tatctatatc ctcgtggctt
     7141 aaatttctag cataaaaagc catttgagaa gctgttgtag aactactact atcaagagta
     7201 taacctatca aagctccttt aatatcctca ggagacatat cttttaaaat tctagatcct
     7261 ataacactct tttcagcatt atctccatgg caagtattgc atttattttg aaaatacaaa
     7321 gccttcgctt tttccatatc atattgctta tttgcatcaa aggtataagt aaaaaatgat
     7381 ttcaaattaa taccaaaaag cgcaacaaca aatattgaac taataaacaa ccatcgtata
     7441 atcatgattt tccttatttt attgtaattt ccgtttgtgt tttattttga tatctatgtg
     7501 tttttttgtt gtattttttt tcttttttaa tatcatagcg ataacgaaca gtccctgaaa
     7561 cttctatatc tttaaagact tcatctaaag gagctgcaaa aacaaaatga tttaaaatca
     7621 taccaattaa aaatattttt ttcattttta ttctttaaac acaaaaaacg attatatcaa
     7681 aaaaagataa tccttgttaa tgaccacctt tatgtaaaaa ataaagtcct acacaaagag
     7741 ctaaaatcga tccagcaaga aaagccatat ccacaggagt agcaaatttc atctgcaaaa
     7801 ccctttgaaa gaaatttacc actaagacca taatgataac ttttgcaagc ttgtctttta
     7861 attgatctaa gctatgcacc tctaaaacct tgctttgttt tgtttgttta aattcttcta
     7921 tttcgctgat aaaaagctca taaactccaa aagaaaaaat aaacaaaact aaagccataa
     7981 gataaagatc aacagctcct ataattaaag ccaccacatc ctcatgcaaa tccacattag
     8041 aacctgcatc aaaaaaataa ttataagtat aaaatataac ttttaaaaca tcataacttg
     8101 caataaaaaa caatacaaaa gctccaatta aaccaaaaat tacgggtaaa attgtaacaa
     8161 tacgacttct aacaagtaaa gattcaaata ttttctctaa catttttttc cttatttatt
     8221 ttttaattct aaccattttt gcgcaatacg cacagcattt gttgcagcac ctacacgaat
     8281 ttgatctgcc acacaccaaa gatggagtat ttttttatca tacacatcag cacgaattct
     8341 tcctacataa gtttcattag tatcgctagt cattaaaggc atagggtatt ttttattttt
     8401 aggatcatct atgacaacaa cacttggtgc tttttctaaa atttctttag ctttttttac
     8461 atctatttct ttttcaaaat gcatagtaat ggcttcgcta tgacttctta aaacaggcac
     8521 tcttacacaa gttgctgaaa cttctaaatt tttatgtaaa attttttgag tttcattgac
     8581 cattttaagt tcttctttag tgtaatcatt atccataaaa acatcaattt gtggaataag
     8641 attaagtgct aaagtataag gaaaagtttg aggttcaaat tcatcaagtt taaaagcaaa
     8701 aaaactttgc atggcttcaa ccaattcttg cattccttct tttcctgctc cacttgcagc
     8761 ctgataggta cttacatcaa cacgctttaa attaaatgca tcatttaaag gttttaaaac
     8821 ttgtaccatt tgtatagtag aacaatttgg atttgcaata atccctgttt ttttccaatc
     8881 tttaatatcc tcaggattgc attcaggaac caccaaagga acatcttttt ccattctaaa
     8941 atgacttgta ttatcaatta caactgcacc cgattctact gcaaatttag catatttttc
     9001 actcacactt ccacctgcgc taaaaaaagc aatatcaata ggattttctt taaatacatt
     9061 ttcagtaagt tctttgactt tataagcttt gcctttaaat tctacttcac tacctacact
     9121 ttttgcactt gctaaaggta aaatactttc cactggaaaa tcaagttcat ctaaaacatt
     9181 taaaagctct tccccaaccg caccagtagc acccacaatg gctatttttt gtttttttga
     9241 cattacctat cctttatttg atatttttta attttttcat ttaaaatttt tatatccata
     9301 cctaaaattt gagaagcttg atccttgtca taatctacac ttaaaagaac ttcacaaatc
     9361 aattctttct ctaaattctt tacatctttt tttatacttc tagcttctaa gaacaaatct
     9421 tcacttgaaa tttcatcatt ttcacttaaa atacaagctc tttgtacaac ggatattaat
     9481 tctctaatat taccaggaaa atcatattca agtaaagcat ttttagcttc ttggctgagc
     9541 tgtttttcct taaaatcata ttctttacaa gtatcttcta aaaccttttg agctatacct
     9601 aaaatttctt ctttgcgctc tcttaaaggc gggatattaa taggaacagt gtttaaacga
     9661 taatataaat ctgaacgaaa ttcgccattt tttatttttt catctaaatt tgcattagtt
     9721 gcactgataa ttcttacatc tattttgatg cttttcgtac ttccaagtcg cgtaatttct
     9781 ttttcttgca aagctcttaa aagtttggct tgaatttcat aaggcatttc gccaatttca
     9841 tctaaaaaca aagtaccctc attagccatt tcaaaaagcc ctattttagt tgcattagca
     9901 tcggtaaaag cacctttttc aaaaccaaaa agctcacttt caatcaaatt tgcaggaata
     9961 gctgccatat taatagcaac aaaaggctta ttagagcgtt tagaatgggt gtgaatataa
    10021 cgagaaaata cctcttttcc tactccactt tctccaaaaa acattacaga ggcatcagtt
    10081 ttagccgctt tttgacttaa atttaatgtt ttttctaaat taggagaagt tgaaaaaaaa
    10141 tctttatttt cttctttttt ttcatttttt ttgctttttt tatcggctgt tttttctctt
    10201 atgattttag cacgcttaat agcctcgact aaagtatcaa catcaaaagg cttggttaaa
    10261 aaatctttta ctcccaaacg aaccgcttct atagcacgac ttaaagtagc atttcctgtc
    10321 ataataataa aatcatattt attttcacag gctttaacaa attctatgcc atcaattcct
    10381 ggcatattaa tatctgtaat aatcaaatct gtattctcat ctattttttt taaagcttca
    10441 gtagcagatt tataagattt aatattaaat tcttcatact ctgctaatgc aatttttaag
    10501 gatttgcgca tattaatatc atcttctact atgactaaat tcatcctaag ccttttaaaa
    10561 aatttctgct atagtatcca atttgcgctt aattttgaat ttactttttt ttaagataat
    10621 aaattatcgc attttgttcg ccaaattcca cggtaaaacg caagggtaaa attttaatat
    10681 aagtttcact ttgagcacgt aataagtcag tattaacaat atccttaaca ctgattttag
    10741 ctcctataaa gcaatcgctt aactcatctt tatgagaatt taaaaaatta aatttaattg
    10801 tttttggcat attatcatca attaatccta aagaagttcg aggtaaaact tttatatctt
    10861 gatcactata agaaatttca catacccatt gttcttcaac attttcactt tgcgtcattg
    10921 ctaaggataa attttgattt tgatgaaaga gaatgaaatt tttactagaa agctctgccc
    10981 aaaaaataaa ttcatcttgg gcaaaaagct taaagctaag aaagattaat aagcaaacaa
    11041 ttctttccac ttgtctgcat cgattttaag ttctaagttt actctataaa gcccttgatt
    11101 aaaattctca tcaataatac ttgcattttt tatcaaacca tttacttgcg cagtaatagt
    11161 tgaacttcta agcattgcat cttttacagt atctttacca tttactttca caccataaag
    11221 cttacttgca agttgtctgt aagcatctgt aatcgctgct ctttttgcta aagctagggc
    11281 ttgagcagta gatactgtat tcattggagc aattccttca ccaactgctg taaaactaag
    11341 ttccgtttcg ctagcatctg gagccaacat cttttcttct ctgataatat cacgcacatc
    11401 atctttatcg actttttgca cgataacatc ttgagatgga ggagtgctat ttgcacttga
    11461 atttttagtt gcactgtttg cacttggtac acaaccagcg aaaattcctg ctattgctag
    11521 cataaaataa atttttttca tttttacacc ttcaaaatat tgtaattagt aaaataaaaa
    11581 gcaataagcg ttccaacttt aaacttattg caaatctaaa ccaaagtttt catcgcttaa
    11641 ctcatcctcg tcattttcct ctttaggaca cttagcgatg ctaaccacct cgtcattttc
    11701 cacattaact acaatgacgc cacttgtatt acgccctgct tttctaatgc tttgcatatc
    11761 aacacgtatc atcttgcctg aacttgtaag agccatcaaa tccatagttt catctactat
    11821 aactacgcta ataagatctt tggttttttc tgtaagtttc atacaaatta cacccttacc
    11881 acctctgctt tgcaatctat attctccagc attggtgcgt tttcctatac cttttgcact
    11941 tatgcttaaa atttcttgct catcattttc tataacaact gcacctacta attcgtcatt
    12001 tttctcttta aacttaatag ccgtcacccc acgacttaca cgaccgattt cacgtacttt
    12061 agcaagtggg aatttgatac acataccttt tttggttact gcaaagagca ttttaccttg
    12121 tgtgcttaca ctttcttcat tttcaagatt ttcatcatct aaattttcaa tttcttgatt
    12181 ttctaaattt tcttcaccac cactggcaaa aatttcatct tcatctcttt gaacaataat
    12241 agcagttacc aactcatcat tttcatccaa gttgatcgct ctaactccta cacttctgat
    12301 attttgatat tcactcaaat ttgtacgctt tacaatacca tttttagtaa agaaacataa
    12361 agatttactc tcatcaaaat ccgtggttgg aataatagcc atgatttttt cttcagcttg
    12421 taaattaata agatttacca ctgcttttcc tttagccgtt cttgagcctt caggaatttt
    12481 ataaacttta agccaataaa gctgtccacg atctgttaca aacataagcg tatcatgtgt
    12541 atttgccgta aagaaacttt ctataaaatc atcatcataa gtcgtaacgg ctaattttcc
    12601 ttttccgcct cgtttttgct tttcatattg tttactaggc acacgcttaa tataaccacg
    12661 atgggtaata gttacaacca tattttcatt aggaatcaaa tcttcaatat caatatcatc
    12721 ataatcatct tcaatttgag taatacgtgg cacatcaaat ttacttctaa tttcttttaa
    12781 ttcatcgcga attaaatttt caagcaaggt ttcacttttt aaaatttctt caagtcttgc
    12841 aatttctttc attaattctg caagttcatt ttcgattttt tctctttcaa gtcctgttaa
    12901 acgacctagt ttcatatcta aaatagcatt ggcttgaagc tcactaagac caaatttagc
    12961 taccaaagaa tctcttgcgg tattattatc agaactgttt ttaattaaag caatcacttc
    13021 atctatatta tcaagtgcaa ttttaagacc ttctaaaata tgagctcttg ctcttgcctt
    13081 ttgaagttca aaaatcgttc ttctaataat aactgttttt ctatgggtta agaaaagatt
    13141 taaaagttct aacaaagaga aaattttagg ttctttattg tgaattgcca acataatcac
    13201 accaaaagta ctttccatag tggtagattt aaatagatta tttaaaacaa tttcactcat
    13261 agcctcacgt ttaagctcta taacaacgcg gattccttct ttattactct catctcttac
    13321 ttcagatatt ccttcaattt gcttttcttt aacaagctct gcaatctgct ctataagcct
    13381 agctttattg gtttgataag gaagctcatc tataacaata acatctttat ttgtcttttt
    13441 ttcaatatga gttttagctc gcactttcac acgaccacgc cctgtgcgat aagcttctat
    13501 aatgcctttt ttaccataaa ttattccacc tgttggaaaa tctggacctt taataaactg
    13561 cataatctct tccaagcttg catctttatt atcaagcaaa tataaaagtc catctatcaa
    13621 ctcatttaaa ctatgaggtg ggatgtttgt cgccatacct acagctatac cacttgaacc
    13681 atttaataat aaatttggaa ccctagaagg taaaacatca ggttcacttt ctgaaccatc
    13741 ataatttgga acaaaatcga ccgtatcttt atctatatct tttaaaagct catgagaaag
    13801 tttactcatt tttgcttcag tataacgcat cgcagcggcg ctatcaccat ctatagatcc
    13861 aaagttgcct tgtcctgtaa tacttggata tctcatagaa aaatcttgag ccattctaac
    13921 caaagcatca taaactgctg tatctccatg tgggtgataa cggcctataa cagcacccac
    13981 tatacgggct gatttgacaa aatctgttct actttttgcc tcatcatttt gcatagcata
    14041 taaaattctt ctatgaacag gctttaaacc atctcttgcg tcaggcaaag cacgacctat
    14101 aataacactc atagaatagt ctaaataact actttttata gaattttcta tatctacaag
    14161 ttcaatatca gaatctttgc taaaaatatt ctccataaaa atccttctat tagttcaaag
    14221 ttttgattat agcatattaa acttttgcat cagctaaaac aagagcaaaa agtacagaaa
    14281 ttttattttc ttctaaaact tttttagctt ccaaaaggct agaaccagtc gttacaatat
    14341 catctaccaa aattacaggt tcttgaatgg tttttaagag tttataattt cttttatgtt
    14401 tttgacgaaa ttctaaactt tttccagaat atttaatatg attttgtgct tttaaaacat
    14461 taaaaacagg ttttacaaat tttgttttaa gatatctagc taaaatagca gaatgtgaat
    14521 aaagcatatc ttcaacctta tcatctaaag ctataacatt aattgtcatt ctaggatcaa
    14581 aaaaatcttt aaattttgca aaacttaatt tagcaagcat tttataaacg aaataaccat
    14641 aaaaataatg tttagagtga agcaagtgtt gtatttcatg gtatttataa aaagaataga
    14701 ctttgaaatt attatcaagc tttcttacat ttaaggaaaa ttcagaaagc tctagctcac
    14761 ataaatcaca aaagcaaagc agagcaaaag ctccgcaatt tatacacctc aaagttcaga
    14821 gattaaacta gctgctttat ttgccatttg ttttattaac aaatgagtat aaaaagttgt
    14881 ttcttttaga tcatcgaaac cttgtacatc ttgcttggtg cggattgtaa atttcttatt
    14941 tttgtttata tcgctaactt gtaaaactcc tactagtttt gaatgtaatc ctgtagcatc
    15001 ttgagttgct ccataagata taaattctaa atcaatctta ctcacataag gtgaattttg
    15061 atcgttattg tcaagcacaa ctattcctct agcttcaagt tcttgtttta aataagtata
    15121 aaataccgca ttaaaattca catcaacaaa taactttttc cctttagcat ttaaaacttt
    15181 ttgcccttct tttaaatcat aaaatctatg caaataaacc ttttttaaag caataccagt
    15241 gtctaaagtg cgtttattgg cacaacattg aattccaaca tcgctaatgt ataaaagccc
    15301 tttaatcttt gcttcaaagc catcaggact ttcacaagaa ctgcattgag aatttttaga
    15361 aatttgatta acttgagcaa aagtatcttg tttagttgcg caagcactca aaaataaaat
    15421 aggcactata aaaatcaaaa attttttaaa cattttttct ccttagaaaa ttattttaaa
    15481 attgtattaa aaatacaagc aaatttcaag ccaagtttta aatttatcat caatctatct
    15541 ttaaaacact caaaaaagcc tcttgaggta aatttacctt acctatagct ttcattcttt
    15601 ttttaccttc tttttgcttt tctaaaagct ttctttttct agtaatatcc ccaccataac
    15661 attttgctgt cacattttta cccatggatt taacggtttc ccttgcgatg attttatttc
    15721 caatacttgc ttgaatggct acttcaaaaa gctgtctagg aactatttct ttcatagcgc
    15781 taacaagttc tcttccttta ctttgtgctt tttcattagg cacgataatg cttagcgcat
    15841 caacattttc acccgccact ttaatatcaa gttttaccaa atcccctact ctaaattcta
    15901 taggttcata atcaaaactc gcatagcctt ttgttaagga ctttaattta tcataaaaat
    15961 ccatcacaat ctcatttaaa ggcacatcat attctagcaa aacgcgctca ggtgtgatat
    16021 agtccatttt aacctgtact cctcttttgc gatttaaaag agtgattaaa ttccctaaaa
    16081 attcacttgg agtaatgata gtggctttaa cataaggctc ttttatatga tcgattttat
    16141 taacaggagg aagctcgcta ggattttgaa ttttaacaag ctctccatcg gtttgataaa
    16201 tttcataagt cacagttgga gctgtagcaa tcaaatcaag attaaattct ctctcaagtc
    16261 tttctttaat cacttccata tgtaaaagtc ctaaaaaccc taccctaaaa ccaaagccta
    16321 aagccaaaga agtttcaggc tcataagtaa tagaactatc gttaagcttt agcttatcca
    16381 aagcatctct taaatcttca aatttatccg tttctatggg ataaagtcct gcgaacacaa
    16441 aagctttagc cttttcaaaa ccccctatgg cttctttagc tttatttttt actaaagtaa
    16501 tagtatcgcc tacttgtaca tcgcctacag ttttaagccc taaaaccacc acgcctactt
    16561 cacccgattg taaagattga gttttaattg gacttaaagg gtggggataa aaaagatctt
    16621 gaactatatg ttttttatct gtactcatga ctaaaacttc atcattttta gctatatttc
    16681 cttcataaat cctaaccaaa gccaaagcac ccaaataatt atcaaaccaa gaatcataaa
    16741 ttaaagcctt agtaggagct tcatcatctg tttttggtgc agggatttta gtgataattg
    16801 tttctataag ctcttttata cccactcctg tttttgcact cacgcaaatt gcatctttgc
    16861 aatctatacc tataatatgc tcgatttcat gcttgacttt ttcaacatca gcattaggta
    16921 aatcgatttt attaatcaca ggaatgattt caagattatt ttcaagtgct atataaacat
    16981 tagctatagt ctgtgcttca acaccttgag aagcatctac tacaagtaaa gccccttcac
    17041 aacttgccaa agaacgactc acttcataag aaaaatccac atggccagga gtatcaataa
    17101 gatttaaaac aaaattttca ttattaaatt tataatttaa acgcactgat tgtgctttta
    17161 tggtgatacc acgctctttt tctatatcca tagtatccat aacttgcgaa ctcatctgcc
    17221 tatcgctaat agcaccacac tcgctaataa tcctatctgc aagagtagat tttccatgat
    17281 ctatatgagc tataatagaa aaatttctaa tattttttac cgacaaaatt tcatcctaaa
    17341 tataaaattt taaagctagg attttaacaa aatttatgtt taaaacaaat aaattttatt
    17401 ttatataaaa aacttcaatt gaaatttata taaagtatac taaaatatca aatgtttgaa
    17461 aaatatttaa aatcagctat gtttttagct ctttatccct tagcaatgtt agcttctaat
    17521 ttgcacgaat ttatagcact aagtcaaaat aatgagtcct atctcattaa acaaatgcaa
    17581 agcgaacaag caaatttgga caaagaacaa gcttttagaa attatctacc ctctcttagt
    17641 ctaaactcag cttatgtagc caacaataaa gatcgcttca ttatcgatcc acaagaaagt
    17701 ttatttgcta aagtttctct taattttttg ctttttgatg ggggtgctag agaggccaat
    17761 ttaagggctt tagaaagcaa agaaaaatta agccttttag acaaagaaca aagcaaaaat
    17821 taccttgcct taaatgcaat cacactttat tttaacaccc taagtcttga aaaaatttta
    17881 ctagccaatc aacaaaaagt agctttttta aaatcaactt ttgaaagatt gcaaaaattt
    17941 tacgatgcag gacttagccc taaagatgaa cttgaaagca ttaaagccaa atatcattta
    18001 agcttattag agctcagtca aaatgaatta aaacttgcca atatacaaaa agagattaaa
    18061 attttaagca atacagattt taaagtgcaa gggaatgctt ttttagaaaa tccgcaacaa
    18121 gaaaaaagtc aaaactatga agtaatgata gctaaagaac aaatcaatct tgctaaagaa
    18181 agtgtaaatt tagcaaaagc tgaatatttt ccaaaatttt atattcaaga taattttaac
    18241 ttttataaaa acaattataa tccaaaagtt ccagctcctt ttgtaaactt agcagatcaa
    18301 ttcttagaaa aatattctca aggtaatcag tttattttag gtatggaatg gaaaattttt
    18361 gatttcaatg caagggctaa agaagttgaa aaagagcgtt taaacgttca aatagccaat
    18421 gcaaacgcaa gatttagtga gagaaaaaat aaagaagaat taaattattt agacaaaagt
    18481 ttaaaagttt tacaagaaca aattttagct cttaatctta gcttaaatgc tgcaaatttg
    18541 gcttttgaaa gtgtagataa aaaataccaa gcaggacttg tttcttatgt ggaatatctt
    18601 caagctttag aggctaaatt taaagcacaa agcgatttag agcttgctaa aaatgaattt
    18661 gaaattacta aagcaaatta ttattttaat gcgggtatag atcttaattc aaaggttaaa
    18721 gaatgaaaaa aattctattt ttacttcttg cttttaattg cgcctttggc gaagaaattt
    18781 acgcaagttt caatgtagaa gcatcaaaac aaagcaaact tgcccttgaa agcataggtt
    18841 tagttcaaaa aattcctgta gaaattggac aaaaagtcag caaaggagaa cttttactta
    18901 ctcttgatca agaaagtgaa aaaatagctc ttcaaaatgc tcaaaattct tatcaacttg
    18961 cccttgtaga atatgaaaat accaaaagca aaatgcaaaa aatcaaagct gtagaaaatg
    19021 ttatagacaa acaaagctat gaagatatga aagctaagtt tgatgctgct aatttaaatt
    19081 taaacaaagc aaaaatcaat atagcttatt ataaaaatat catgacaaaa aaagaattgc
    19141 gcgcacctta tgatgctatc atcgcaaata aatttataca agttggcgaa ggagtaggag
    19201 gagtagctca acctttgata gaaatttttt cctatccaca aagcaaactg attttaagtt
    19261 ttgatgaaaa atacaaagat aaagttaaat taggcgatga tttcttttat aaaatcgatc
    19321 aaaatggtac agaattgaaa ggaaaaatca gtcttattta tccaagcata gaagtaaaaa
    19381 caagaaaaat ttatgctgaa gtgcaaacta caaatctaac acctgggctt tttggcgaag
    19441 gtagaatcat cactaaagat taaaaatgtt taaactagct ataaaccgac caattactgt
    19501 gctaatgttt ttcttagctc ttatgatttt tgggctaatc tctgctttta gcatgagtgt
    19561 aaatttattt cctaatgttt ccatacctct tataaagatt acaagcaagg taaatggaga
    19621 tttaaatttc gtagaatcaa aagtcaccaa agaaatagaa aatgctctaa gtgagattga
    19681 tggagtaaag accataacct cagctgcgta tgataatttt agtgtgagtg tagtcgagtt
    19741 taaactaggt aaaaatcttg aagtagctgc taatgatgtg cgtgataaaa taggaacttt
    19801 aagcctacct tctaagcctg aaattgaaaa aatcagttca gattctggtt ctgctatttc
    19861 gcttttttta tattctaaag ataaattaca actcatgcgt gaaatcaatg acaaaataaa
    19921 gccttttttg caaagagttg aaggggtagg taaaatcgaa gctaaggggt ttttagaacc
    19981 ccaaattcgc atagaattaa aaccaaatga acttagaaaa tacaatctta acgcccttga
    20041 tgtagcaaat attatcaaaa gtcaaaattt taaacaagcc cttggcgaac ttaataacaa
    20101 tcaagataac tatatcatta aaggctattt tgaagccaca aatttagaag aacttagtaa
    20161 tcttcgcata aaaacaggag tatttttaag tgatattgct aatatttcaa gcctttatga
    20221 agatgaaaaa caaagtgctt tatacgaagg taaagaaggg gtgcttttag aactcggaaa
    20281 aatcacaaat tataacaccc ttgaaatgat taaaaatgtc aaaaatgcct tgcctatttt
    20341 agaaaaacaa attccaaaag atataagcat taatatgctt tatgataaaa gcttaaatat
    20401 ccacaagcac ctttctcaag tgatttttga tatggttttg gggatttttc taacccttgt
    20461 tatcgtgttt ttatttttaa gaaatttaag tgcaactctc attgcttgca tagctatacc
    20521 tacttctatc atttcaactt tttttattat cgatctttta ggctatgatt taaaccgctt
    20581 aacttttata gctttaacct taagcatagg aatttttatc gatgatgcta tagtagtgat
    20641 tgaaaatatt gctaaaaaac taaaaactta tccgccttta caagctgctt ttttaggtat
    20701 caatgaaata ggttttagtg ttttaagcat aagtatagtt ttactttgtg tttttatccc
    20761 tatttcttat atgaactcta tatcagggct ttttttcaat gccttaggca taagcgttgc
    20821 aagtgggata gttataagct ttttggtttc tgtattttta atacctagta ttggggcaag
    20881 atttttaaat ccaaaagaaa acaagtttta tgaaaaaaca gaagcttttt ttgaaaaaat
    20941 agagcaaaag tatgaaaatt tactctataa aattttacaa aataaagtaa aatttatcct
    21001 agccactctt gtttttatag ggctttcttt tgctttagcc actcgcatag ggcttgattt
    21061 tttacctatg gaagatgata gtgaaattca agttttgctt gaaagcaaaa aggatttaag
    21121 tttagaagcc atgaaagaaa aaagtttaaa tttacttgaa aaaatcaaaa atgatagcaa
    21181 tgtcaaatac gcttttttac ttgtaggcta tgatgatgcc aaagatgcta caaaggctaa
    21241 aatttatgtt aaacttaaaa atttagacga aagaaattta agacaaagtg ccatagtaag
    21301 tttatatcgt caaaaatttc aagatgaaag tttaaaaatc aaaattttag aacttccaaa
    21361 gatagagggt gcaggtattg atgatcccgt gcaattttta atcttaggag atgatttaaa
    21421 cactctaaaa gaagctgctt ctcaggcaaa agaaatttta ggcactaatg cacgcattgt
    21481 agatataagt gataatgcta atgctacaaa agatgaagta gccttacaca tcaacaaaga
    21541 aaaagccaaa cttttagatg tcaatcctca atatatcgct ggggttttag ggtattcttt
    21601 ctcgcaactt agcgtaggaa gcatggatag aggcaattca aaagatgata ttatcctaag
    21661 ttttgctcca gaatttaaaa aagacataga agctttaaag cgcattagca ttaaaaacaa
    21721 ccaaggtata aatttagaac tttcaagcgt ggtggatttt atatacagta aagatttaaa
    21781 aactatcaat cgttacaata aaaaccgctc tgtgaaaatc acagctggag tgaatgatct
    21841 ttccttagga gcggtgcaaa aacttttact agataatatg gataaaattt taaataacaa
    21901 tccaagtctt agctatgctt tttcaggctt tatcaatctt ttaggtgaaa ccgtgcaagg
    21961 ttttgctatg gcagtagcac ttgcttttgt tttaatttat cttgttttag ccgcacttta
    22021 tgaaagtttt attctgcctt taatcatcat gataaccatg cctttagcct ttggcggagc
    22081 ttctataggg ctttttatca cagggcataa tttttcactt tttgtactta ttgccatcat
    22141 cttacttttt ggtatggtgg ggaaaaatgc tattttactc gtagatgtag ctaataaaaa
    22201 atgccatgaa ggtttagatc ccgataaagc tcttttaatc gctggaaaat cgcgcttaag
    22261 ggctatattg atgacaactt ttgctatgat ttttgctatg ctcccacttg ctctttcaag
    22321 gggtgcgggc tatgaagcta attctcctat ggcaatagcc attatctttg gacttataag
    22381 ttcgactttg cttaccttac tcgtagtacc tgcacttttt aaattctgtt ttaaactaga
    22441 tagcaaatta agaaaaattt atgagagaga aaaattaaat taaccaaaat gattaattta
    22501 atttttttta agtattattc ttataaagtg cttttaagtt atcataggca atttgtattt
    22561 tttcaaactg ttctcttgcg taagcttttt ctattgcact ttttccttga tgaaaatcag
    22621 gatgataaag ttttaccaaa atcaaatatt tttgtctgat ttcactaaga tcattttgcg
    22681 gagtgcattc taaagtatta aaataattac taaaaagctt agctaaagca ttaaatttcc
    22741 atttcatatt ttctttattg tgaatatttt ggcgaaattt tttatactct tcgcggtcaa
    22801 cttcaaaatt cacgcaatat tttaaatgct cgctctcatc tgcaaaagct tcaaaaagtt
    22861 caagggtatt ctcgttttta tattctaaaa ttagaatatt tgtcatttca ttatattcta
    22921 tataatgatc ttgaaaataa tttcttatat aagtaataaa taatttttca ttagagctta
    22981 acttcatcaa aattctaccc gcaacaaaat caatcttgat aaacaacata ggcttaagca
    23041 tattattttg ctcaaaaatt aatctaaaag ttttaaaatg agcatcttgt aaattctcta
    23101 taccttcatt tgtgcttttg cgatattttt gatctaaaac ttttaagaaa taacggcgct
    23161 gtggaatttc attttcttca aaaaaagaaa aaattttatt ttttcgtcct atgacctttg
    23221 tgaaattttt ggtaatcaag tctttaaaat actgaaatac gctaatatca tctgtattaa
    23281 cattgatagt ttctaaagtt tgcacgattt gcatctattt ctcccataaa acctcatttt
    23341 caaaaagctc tttagtgcct tttaaaattt cattgggtgt ataatcggct ttataagata
    23401 aagattgaca cttttttaca aaatacccaa gataaatata atctaagttc atttttttag
    23461 ctatttgtat ttcattgagc aaagaaaatt tacccaaaga aaaatacgaa aaatcaggat
    23521 cataaaaaca ataaatgctt gaaattccat cctctaaaat atcaatcaaa tcaacgcaaa
    23581 cgagcttatc ttctatataa aatgcaagct catatccaaa attcataaaa ccatcaacat
    23641 aaagattata atactgttta aagcttaaat cataacgctt ccagttcttt ttttcttcca
    23701 taaaacgatg gtatttatca tataaaaaca aatgttcatt gcttaaattg ggtgttctaa
    23761 gtataacttt ggtgttaata tttttattta taacccttct ttcacttctt gaaaaattat
    23821 attcattaac taaaattcta agacttaaac attcatcaca atctttacaa atagggcgtg
    23881 aaaaatacct accaaaacga cgccaacctc gttttattag ctcattattg atttctttag
    23941 agcaattttc aatgtattta tactctattc ttgagcgttt atcttttaag taaggacact
    24001 gatcttcaag agtacaaaaa ccaatctcaa gcattaaatt ttcttaatat ctgtattttt
    24061 gataaattcg gaaaattcat cctgtagttt ttcttgcttt aagaaaattt cttgcatttc
    24121 cttatctatg tttgtttctt gatttttttc gcgaatatct ttggctagtt tttctaaatt
    24181 ttttacactt gctccactct tgcttgattt cttcgctaat tttgaagtat tggtgttagc
    24241 ttgcatttct tttttaatac ttttaagact gtctaaaaaa tccatctatt attccctact
    24301 ttctcgtatt tttttaagcg tagcagctat tgcagctata acttcttctt tattttcttg
    24361 atgacgatct tctgtttttt ctaataattc ttgcatatgt gtctctatga aagaggtgtc
    24421 taaatacccc cttctaaatt ctcttgtttt tgtaatggca attaaaaatg gtattgttgt
    24481 tctaatatca tcaatcacaa attccttcaa agcacgctca agtttattaa ccgctaaatc
    24541 ataacttgtt gctttaataa taagctttgc aagcatggaa tcataataag gcggcacagt
    24601 atagtcttta taaatatgac tatcaactct aacagatggt ccaagagctg ggtagtattc
    24661 tcctattttt ccaggacttg gaataaaatt tttccataca ttttcagcag taattctagc
    24721 ttcaatagca aaacccctag gtttaatatc gctttgttct aagtccaaaa tttctcctgc
    24781 tgcaatacga atttgtctta caataagatc aatacctgta atttcttcag taattggatg
    24841 ctcaacttga attcttgtat tcatttccat aaaataaaag cgattataat catcaagcaa
    24901 aaactctata gttccagcat ttgtataacc tacagcctta gcagctgcca cagctgtaac
    24961 acccatggtt tttctaagat tatctgaaat tccagggcaa ggtgctatct caattacctt
    25021 ttgatgtctt ctttgaatag aacaatccct ttcacaaaga tggataatat ttccgtagtt
    25081 atctcctaaa atttgaaatt ctatatgtct gggattaact acatattttt ccataaatac
    25141 ttcatcatta ttaaagtatg ttaaagcttc tcttttgcaa gattcaaagg cattttcaag
    25201 atcttgttct ttatgaacaa cgcgaattcc gcgtccacct ccaccacctg aagcttttaa
    25261 aataacagga taaccaatct tctcagcaaa aattttaatt tcttccatgc tataggaatt
    25321 taatttttca gtccctggaa caataggtat gccattttta gccattaact tacgagcgat
    25381 atttttattt cccatcttat ggattacttc agattttgga cctataaaaa taattccagc
    25441 atcttcacaa gccttagcaa attcgtaatt ctcacttaaa aatccataac caggatgaat
    25501 cgcatcagca ccacaagcct tagcaatctc aacaatacga gcaacatcta aatatcctct
    25561 tatagcatcc gttcctatgc gataagcctc atctgcgatt tttacatgca aacattcacg
    25621 atcaggctct gtaaaaactg caacactttt aatatgcaaa tctctacaag cacggattac
    25681 tctaacagct atttcagctc tatttgctat gagaatttta tggatttgat tcataatttg
    25741 ccttttttgt tatattttta ttgttaattt tagcaaattt tccttacaaa aacttagcaa
    25801 aaaatttaat ttatttta
//
LOCUS       DARBAC010000007        24988 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.007, whole genome shotgun sequence.
ACCESSION   DARBAC010000007 DARBAC010000000
VERSION     DARBAC010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24988
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.007"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..952)
                     /gene="trpS"
                     /locus_tag="SB799_000210"
     CDS             complement(<1..952)
                     /gene="trpS"
                     /locus_tag="SB799_000210"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEG0867479.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKI"
     gene            complement(949..1446)
                     /locus_tag="SB799_000211"
     CDS             complement(949..1446)
                     /locus_tag="SB799_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEG0867480.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKISEIFAQKGEIFFREQEQKMADFFSSCEKTCIATGGGFVNVSNLEKVGFCIYLKAS
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYELKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(1433..2815)
                     /gene="der"
                     /locus_tag="SB799_000212"
     CDS             complement(1433..2815)
                     /gene="der"
                     /locus_tag="SB799_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEG0867481.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVVNKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEHYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELHLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRSHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            2917..3849
                     /locus_tag="SB799_000213"
     CDS             2917..3849
                     /locus_tag="SB799_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0867482.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            3846..4661
                     /gene="kdsA"
                     /locus_tag="SB799_000214"
     CDS             3846..4661
                     /gene="kdsA"
                     /locus_tag="SB799_000214"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEG0867483.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQAAAVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQKNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            4658..5122
                     /locus_tag="SB799_000215"
     CDS             4658..5122
                     /locus_tag="SB799_000215"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEG0867484.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            5122..5520
                     /gene="nusB"
                     /locus_tag="SB799_000216"
     CDS             5122..5520
                     /gene="nusB"
                     /locus_tag="SB799_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEG0867485.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYHGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            5517..6197
                     /gene="pyrF"
                     /locus_tag="SB799_000217"
     CDS             5517..6197
                     /gene="pyrF"
                     /locus_tag="SB799_000217"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEG0867486.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKIAMQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKI
                     IKEHTQRNFLTLTPGIRPFGEKNDDQKRVANLTMARENLSDFIVVGRPIYKDNNPRKI
                     CEKILQEI"
     gene            6252..7145
                     /gene="msrP"
                     /locus_tag="SB799_000218"
     CDS             6252..7145
                     /gene="msrP"
                     /locus_tag="SB799_000218"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEG0867487.1"
                     /translation="MIITPENLYKKRRDFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFSLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIEFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
     gene            7145..7717
                     /locus_tag="SB799_000219"
     CDS             7145..7717
                     /locus_tag="SB799_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HEG0867488.1"
                     /translation="MRTKYFKFLAYFSFIISLIYGFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTKNYPKILGIFAAFWAILHFLNYFIFDRNAQISRLFDDISHR
                     LLEASGFIAFLIIFLMLLSSFEIFKKLSKIRKLGYLCLVLASYHYFLTPKVPMFWEWS
                     ALIVALFYFIVRYTKTLKKLKSNNLTFIKT"
     gene            complement(7682..9394)
                     /locus_tag="SB799_000220"
     CDS             complement(7682..9394)
                     /locus_tag="SB799_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0867489.1"
                     /translation="MEKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSIS
                     SINAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALL
                     QSELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFVRIQLYERLSFIQKSAYNS
                     EIKNQIKLYEKHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESS
                     ISREMNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDISKSFFIIDEI
                     LQRIINFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDK
                     KVLERLHSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKW
                     VGESEQNVRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIF
                     LEQIERFSGVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFE
                     KDFDINILSNYELSGAQILMVVKNTALKVAVSQDGVFKMQDFIESIQKELNSSFDKSK
                     IVGF"
     gene            complement(9394..10218)
                     /locus_tag="SB799_000221"
     CDS             complement(9394..10218)
                     /locus_tag="SB799_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867490.1"
                     /translation="MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIVDDINGNLEIPLVKTNDFWQDERKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIRQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(10229..10705)
                     /locus_tag="SB799_000222"
     CDS             complement(10229..10705)
                     /locus_tag="SB799_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867491.1"
                     /translation="MKHCLALCFIFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDIL
                     KANALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(10714..11205)
                     /locus_tag="SB799_000223"
     CDS             complement(10714..11205)
                     /locus_tag="SB799_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HEG0867492.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKAIKDSKLKVNSSIRGEEIRVVAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(11195..12130)
                     /locus_tag="SB799_000224"
     CDS             complement(11195..12130)
                     /locus_tag="SB799_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEG0867493.1"
                     /translation="MKIVCLDAATLGDYDLSIFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGINNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQIPYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGSIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKHLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(12133..13302)
                     /locus_tag="SB799_000225"
     CDS             complement(12133..13302)
                     /locus_tag="SB799_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEG0867494.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVIDNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLSHIANEAGFQTNFSFVDEVEFS
                     EEGVFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKVIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(13312..13917)
                     /locus_tag="SB799_000226"
     CDS             complement(13312..13917)
                     /locus_tag="SB799_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HEG0867495.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSTSSAKKSGFFGGGSKAASSSSSFGS"
     gene            complement(14040..14252)
                     /locus_tag="SB799_000227"
     CDS             complement(14040..14252)
                     /locus_tag="SB799_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEG0867496.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            14412..15788
                     /gene="ccoG"
                     /locus_tag="SB799_000228"
     CDS             14412..15788
                     /gene="ccoG"
                     /locus_tag="SB799_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEG0867497.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFALPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYGGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            15775..16407
                     /gene="cmeR"
                     /locus_tag="SB799_000229"
     CDS             15775..16407
                     /gene="cmeR"
                     /locus_tag="SB799_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HEG0867498.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMDFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINGSKA"
     gene            16501..17604
                     /gene="cmeA"
                     /locus_tag="SB799_000230"
     CDS             16501..17604
                     /gene="cmeA"
                     /locus_tag="SB799_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HEG0867499.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMARATFENASKDFNRSKALFSKNAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTVGDALVNIGDYVSASTTKLVRVTNLNPIYADFFISDTDK
                     LNLVRNTQSGKWDLDSIHANLNLNGETIQGKLYFIDSVIDANSGTVKAKAVFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQDQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            17604..20726
                     /gene="cmeB"
                     /locus_tag="SB799_000231"
     CDS             17604..20726
                     /gene="cmeB"
                     /locus_tag="SB799_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HEG0867500.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGVISLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNDDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALVLAIGIVVDDAIIVVENIDRILHENEQINVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLNKAVPNSLVPEED
                     QGLMISIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLQDWKDRNVSADQIIAELNKKFAFDRNASSVFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAAANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKRGKVHE"
     gene            20719..22197
                     /gene="cmeC"
                     /locus_tag="SB799_000232"
     CDS             20719..22197
                     /gene="cmeC"
                     /locus_tag="SB799_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HEG0867501.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSSF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYESAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNT
                     KYSYANSIVDVIKAFGGGFEQSEDTSKNIKEESKNLDMSFRE"
     gene            complement(22220..22471)
                     /locus_tag="SB799_000233"
     CDS             complement(22220..22471)
                     /locus_tag="SB799_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867502.1"
                     /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
     gene            22599..23945
                     /locus_tag="SB799_000234"
     CDS             22599..23945
                     /locus_tag="SB799_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEG0867503.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPKEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKDKGFDFSSMYVGGGTT
                     LINEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYIFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
     gene            complement(23942..24394)
                     /gene="hemJ"
                     /locus_tag="SB799_000235"
     CDS             complement(23942..24394)
                     /gene="hemJ"
                     /locus_tag="SB799_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEG0867504.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEIVKIQERKLYFYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSAKSGKYFRIYNEFPTIMFIIIALMMVIRPF"
     gene            complement(24378..24848)
                     /locus_tag="SB799_000236"
     CDS             complement(24378..24848)
                     /locus_tag="SB799_000236"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEG0867505.1"
                     /translation="MAKTFKFIFYFWGAFVLVFVLDQWVKSLTLAGLRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIVVLFIYLFWQKTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(24841..>24988)
                     /gene="glmM"
                     /locus_tag="SB799_000237"
     CDS             complement(24841..>24988)
                     /gene="glmM"
                     /locus_tag="SB799_000237"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="catalyzes the conversion of glucosamine-6-phosphate
                     to glucosamine-1-phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEG0867506.1"
                     /translation="LENKNINTLFRYSGTENLIRLLLEAKDIKLLEKEMKNVVEFFKK
                     ALNG"
BASE COUNT         8705 a         4016 c         3546 g         8721 t
ORIGIN      
        1 cgattttttc ataaattttt tgcatttttt cttgggcgat ttttcttgct tttgtcgcac
       61 caaaatccaa aatttctttc aaatgtgaag gcttttctaa aagctcattg tatttttctc
      121 tcgcttcttt aaaataagca tttacaagct cgtttaaata cattttaaaa tgtccataac
      181 cctcaccacc tttttcatag cgtatttgta attctttttg ccctgattca tctaaaaaaa
      241 gctttgcgat tttaaaaata ttgcagtttt catgatcttt tggatcttct aaagcggtgc
      301 tatctgtaac tatggaagaa atttgttttt ttaaggtttt ttcactgcta aaaatatcta
      361 tagtattttg ataagattta ctcatttttg ccccatcggt gcctacaact acagctactt
      421 cttcattaac tttagcctct ggaagggtaa aaatttcacc ccattcatta ttaactttta
      481 aagcaatatc gcgtgcgatt tcaacatgct ggatttgatc ttttcctaca gggacaattt
      541 gtgtatcaaa aagcaaaata tcagctgcca ttaaaacagg ataagaaaaa agcccatgtg
      601 aagcactaag ccccttagca actttatcct tgtaactatg cgcacgctct aataaaccca
      661 taggagtaaa ttgcgataaa atccaataaa gctccataac ttccttaacg tcactttgca
      721 accaaaaaac gcttttttga ggatctatac caaggcttaa aaaagccgca gcagctttta
      781 aggaattttg tttaagtttt tctccatctt gagaagaagt catggcatga taattagcaa
      841 taaacataaa catttggctt ttttcttgtg catctaccat ttgcttaatc gcaccaaaat
      901 aattacctat atgcaaatcg ccacttggct gaaggcctgt taatactctc attttatcac
      961 ctttttaatc tcgcttaaaa gctcatctat atttttattt tctatattta aaataaaatt
     1021 tgcctttagt tcatacttgc ttaaacgctc attatataat ttttttgctt taatttcatc
     1081 ataaaataaa ggtcttttag aaatttcatc tttgtctaaa cgctttttta aatattcaaa
     1141 acttgctttt aaataaatac aaaaacctac tttttctaaa tttgaaacat taacaaaccc
     1201 cccgcctgta gcaatacaag ttttctcaca agaactaaaa aaatcagcca ttttttgctc
     1261 ttgttctcta aaaaaaatct cgcctttttg tgcgaaaatt tcactgattt tttgattaaa
     1321 tttttgttct attaaaaaat cactatctaa aaaaacaaga tctaaatcct tagccaaagc
     1381 tcttgctaaa gtgctttttc cagaacccat aaatcctata aaaacgatat ttttagcttt
     1441 catcattttc tttactgccc tttttacgcg aagcaatcac taaaggcaca ccttcgaaat
     1501 taaattcttt tctgatttga ttttgtaaat aacgcttata gctaaaatgc aaggccttag
     1561 gacgattcat aataagcgca atttttggcg gtgctaagtc gtattgtact gcataataaa
     1621 ttttaaccaa tttcccataa tcatgcggca aaggatgtga tcttgtggca ttttctatca
     1681 gagtattaag cttagaagtt tggatttttt gagtgaaatt ctcaaaaatt tgcaaaattt
     1741 tatcgagtaa aacatgcacc ctttttccac ttaaagccga tacgctaatc acaggtgcgt
     1801 aagctagaaa tttaaaacga tcaagatgca attcttttac agttttatca aaatccatct
     1861 cacttttatc ccatttattt aaaacaataa tcacacccaa ataatgctta gccacaagcc
     1921 cagcaatgcg ttcatcaagt tcgttaaagc cctcatgcgc atctaaaacc aaaagtgcta
     1981 tttgagaatg agataaaatt ttttccgtgc gatttagggc aaagcgttcg agtccttgaa
     2041 ttttacccct ttttctaata cctgcagtat caacaaattc tatcacttta tctttatgaa
     2101 ctacactttc attaacagga tctatagtag ttcctgcgat agaacttaca acactgcgtt
     2161 cttgtttaac caaagcattt aaaagacttg attttccaac atttacacgc cctacaatac
     2221 ccactctgat atgattttga tcgacttctt taaattgaaa ttcttttcct tcttcataat
     2281 gctctaaaaa atcttctaaa ttttcttctt catcagggat taaaaactct tcatgtaaaa
     2341 atttttcaag ccattcataa agttcatcta agcctacatt atgggttact gaaagattga
     2401 agatttcctt tactccaaaa tttgcaaact cccaagccct ttcttcatct tttttattat
     2461 ctactttatt aaccactaag gctataggtt ttccaagttt ttttaaagaa taaaaaaact
     2521 gtctatcctc atcatcaggc gctaatttcc catcaactag ataaagtatg atatcgcttt
     2581 ctttagccac ttttaaagtg ttttttttca catttttaaa aagttcatca ctttcatcaa
     2641 gccctccact atcaataagc atggcttttt ttgaatgaat atgaatttgc gttttatttg
     2701 tatctctagt tgtacctgaa atatcacttg taatagctat tctttgtctt gccattctat
     2761 taaaaagact tgattttcca acatttggct tgcctataag tatgatgctt tgcatttttt
     2821 tcctagaaaa ttatattttt aaaattatat aaaatttggc ttaatattaa gcaaaaaaag
     2881 actagaatta gcccagattt tagtcaagga aaaaaaatgc taaaagtaat caagcataat
     2941 ttaggaattt atttcatgat tttagcatgt ttggattttg cacttatggg agcttgtgca
     3001 aaaattctta gcaaggaaat gagttctata gaaattatgt tttttagaaa tatcatagga
     3061 atttttttca tagtctatct tttaaaacga tctaaggcac ataaagaagg gggacatttt
     3121 tggctcttgg tatttcgtgg agtagtaggc acgctttcac tatatatgtt tttctataat
     3181 gtttcaaata ttacactagg tggagctttt gcttttcaaa aaactgctcc tatttttatt
     3241 actttaatag cttttgttgt ttttaaagaa aatattggca tcaaaggctg gataggaatt
     3301 ttaatagcat ttggtggagt gcttttaatc gctcaacctt gggctcataa tttaaatcat
     3361 tcaggctttg atttaaaaaa ttcagttata ggtatcacga gtggattttt agccgcttta
     3421 gctcttacaa gtgtaagaga acttagaaaa tcttacacta cagaacaaat tgccttttct
     3481 tttatccttt taggaacctt aatgccttta atttctatga tcagtgctga attttttgaa
     3541 ccacagcatc ttgattcttt acatttagat ttcattctag caccttttgt gatgccaagt
     3601 cttacagctt ggcttatcat tgccattatg ggaactttag gcaccattta tcaaattcac
     3661 gtcactaaag cttatggtat cgctaaacaa gcaggagtag ttgctggagt tagttatctt
     3721 gatgtggtat ttagtatgat agttgggata attttaggag ataatttacc aagtactatg
     3781 gtttttttag gtataatagg cattattttt ggtggattaa ttttagttaa gaacaaagga
     3841 aaaaaatgaa aaaaatgata ctcattgctg gtccttgcgt gatagaaagc aaagatttga
     3901 tttttaaagt tgctgaacag ttaaaaaatt ttaatgaaaa tccaaatata gaattttatt
     3961 tcaaatcaag ttttgataag gccaatcgca caagtattaa ttcttttcga ggtcctggtc
     4021 ttgaagaagg attaaaaatt ttacaaagcg taaaagatga atttggtatg aaaatcttaa
     4081 ccgatataca cgaaagcaat caagcagcag ccgtaagtga agtagctgat gtcttgcaaa
     4141 ttcctgcttt tttatgtcgt caaaccgatt tacttgtagc cgcagcaaaa actaaggcaa
     4201 aagttaatat caaaaaaggg caatttttaa acccaagcga tatcaaatac agtgttaaaa
     4261 aagttctaca aacccgtggc atagaagatg aaggctatga agctgctcaa aaaaatggtg
     4321 tttttgtagc tgaaagagga gctagctttg gctatggaaa tctagtagta gatatgcgtt
     4381 ctttagttat catgcgtgaa tttgctccag ttatttttga tgctacccat agtgtacaaa
     4441 tgccaggggc tgcaggtgga agtagcgggg ggaaaagcga atttgtagaa cctttagcaa
     4501 gagcggcagc agccgtaggc atagatggct ttttctttga aacacatatt aatccttgcg
     4561 aggctttatg cgatggacct aatatgctta atcttacacg ccttaaaaat tgcgttaata
     4621 cattactaga aatacaaaat atcataaagg aaaacaaatg aatattattg aaggaaaatt
     4681 aaatttagac tcaaatacaa aaattgctat cattaatgca agatttaatc atatcatcac
     4741 agatcgcctt gtagaaggag caaaagatgc ttttttaaga cacggaggca aagaggaaaa
     4801 tctaagcctt atacttgttc ctggtgcttt tgagcttccg tatgcattaa aaaaagctat
     4861 agaaagcaaa aaatttgatg caatttgttg cgtaggtgca gtaattcgtg gctcaactcc
     4921 gcattttgac tatgtttcag cagaaaccac caaaggcata gccaatgtga gtttaaatca
     4981 taatatccct gtaagctttg gtgttttaac tacagataca atagaacaag ccatagaaag
     5041 agctggaagc aaggcaggta ataaaggctt tgaagctatg acaactgtaa tcgagatgtt
     5101 aaatttaagc aaggagcttt aatggcaacg cgtcatcaag ttcgccaaag cgtcatctcc
     5161 ttgctttatg cttttgaatt aaattctcaa aacaacgttt ttgtagatga aattttagat
     5221 gaaaaaaaaa tacgcaatga acaaaaaaat tttaccttaa atttatatca tggaatttta
     5281 gacaatttaa acaatattga tgaaacctta aattcatttc taaatgataa tcaaattaca
     5341 gctttaggac atgtagaaag agctatacta agacttgggg cttatgagtt actttttacc
     5401 gatactccta gcgccattgt tatcaatgag gctatagaac ttgccaaaga acttgctaat
     5461 gacaattctc caaaatttat aaatggagtt ttagatgcct tgataaaggc taaaaaatga
     5521 agctttgtgt cgcacttgat ctttctacaa aagaagaatg cttgcaactt gctaaagaat
     5581 taaaaaattt agacatatgg ttaaaagtag gtttaagagc atatttaaga gatggtttta
     5641 aattcataga agaacttaaa aaagttgatg attttaaaat atttcttgat cttaaaattc
     5701 atgatattcc caacactatg gcagatgctt gcgaagaaat atcaaaactt ggtgttgata
     5761 tgatcaatat ccacgcaagt gctggaaaaa tagctatgca agaagttatg acacggctta
     5821 gcaaattttc aaaaagacct ttagttttag cagtttctgc tcttacgagt tttgatgaag
     5881 aaaatttctt tagtatttat agacaaaaaa tcgaagaagc tgtaattaat ttttcaaaaa
     5941 tatcctatga aaatggactt gatggtatgg tatgctctgt ttttgaaagt aaaatcatca
     6001 aagaacacac tcaaagaaat ttcctaactc tcactccagg aattcgtcca tttggagaga
     6061 aaaatgatga tcaaaaacgc gtcgctaatt taacaatggc tagagaaaat ttaagcgatt
     6121 ttatagtagt tggacgccct atttataaag ataataaccc tagaaaaatt tgcgaaaaaa
     6181 ttctacaaga aatttaataa tcattatcct tgttatgttt taataataaa aatttttaac
     6241 aaggaaaaat tatgattata acccctgaga atttatataa aaaaagaaga gattttttaa
     6301 aacttggagc aggtgcttta ataagttcaa gcgtgcttgc ttctaaatta tctgctttaa
     6361 atttcacaag cgatactaat ccaaacaaac ttgaaatcag cgatgaagaa cttgctacaa
     6421 attatgtcaa tttttatgaa ttttcaacag ataaaaaaaa ggctgtatca ttggcacaaa
     6481 atttcaatac tcaaaattgg aaaatcgata tcagtggaga aatagaaaaa cctttaactt
     6541 taagcatgga agatatttta aaattctcac tagaagaaag aatttatcgt tttcgctgtg
     6601 ttgaaacttg gtctatggtg gtaccttggg taggctttga attgcgtcgt ttgattgaaa
     6661 tggcaaaacc tacaagcgag gcaaaatttg ttaaattcac cactctttta gataagagcc
     6721 aatttcccga tcaagacgct ttatttccaa ctatagacta tccttatgta gaaggacttc
     6781 gcatggatga agctatgcat cctcttacct tgcttgcagt aggaatgtat aaaaaagcct
     6841 taaagcctca aaatggtgct ccaatacgcc ttgttgttcc ttggaaatat ggctttaaaa
     6901 gtattaaatc catagttaaa atagaattta ccaaagaaca gcctaaatcc acttgggaaa
     6961 gttacgctcc aagtgaatat ggtttttatg ctaatgtcaa tcctaatgtt tctcatccta
     7021 gatggtctca agctaacgag agggctttag gagacttctt taccaaacct actttaatgt
     7081 ttaatggcta tgaaaaagaa gtggcaagtt tatataaaaa catggacttg aaagtgaatt
     7141 tttaatgcgg acaaaatact ttaaatttct tgcttatttt agctttatca taagtttaat
     7201 atatggcttt tatcatatca taaaagcctt tgattttgta aaagaagcct atatttacac
     7261 cggaatattt gctttaatct ttttaaattt aagtctttta ttttctttac ttaaatttaa
     7321 aaaaacaaaa aattatccta aaattttagg tatttttgca gctttttggg cgattttaca
     7381 ctttttaaat tattttattt ttgatagaaa tgctcaaatt tcaaggcttt tcgatgatat
     7441 ttcacatcgt ttattagaag caagtggatt tatcgcattt ttaatcatat ttttaatgct
     7501 tttaagttct tttgaaatct ttaaaaaact tagtaaaatc agaaaactag gatatttatg
     7561 cttagttttg gcaagttatc attatttttt aaccccaaaa gttcctatgt tttgggaatg
     7621 gagtgcttta attgtagctt tgttttattt tatagttcgc tatacaaaaa cattaaaaaa
     7681 gttaaaatcc aacaatctta cttttatcaa aacttgaatt taattctttt tgtatgcttt
     7741 ctataaaatc ttgcatttta aaaaccccat cttgtgatac agctactttc aaagctgtat
     7801 tctttactac cattaaaatt tgtgctccac ttaattcata atttgataaa atatttatat
     7861 caaaatcttt ttcaaataat gcttttttag gtagaaattt ttcccaaatt ttaagcctat
     7921 ctttaaaatc aggtttttta aattctatct tataatcaaa tcttcttgaa aatgcactat
     7981 ctaagctttc taaaaaattt gtcgtagcga taatcacacc actaaaacgc tcaatttgct
     8041 ctaagaatat attttgcatt tgattatgca ttttatcact accactactt ccatctacac
     8101 gcgtacttaa aaactgatca gcttcattga gaagtaaaat aggactttgt ttacaagttt
     8161 gcacgatatt tttataagta tcaaaaattt ttcttacatt ttgctcactc tctccaaccc
     8221 atttgctcaa aattttagaa cagtcaaaac taagaacaga ttttttcatt gatttagcca
     8281 tagctaaagc tgacatagtt tttccagtac cagcaggacc ataaaaaata attttagctt
     8341 ctatattttt attactcttt ataccccaag aatgaagtct ttctaggact tttttatctt
     8401 gttgttttaa aatattttct aaaagctctt ttgtattttc aggcataata atatcattga
     8461 tgtcagtgct tggttctata agctcgaaaa tatcttgatc ttttaaaaca ctttcaattt
     8521 tgattttttt actttgtttt ggttcaaaat ttataattct ttgtaaaatt tcatcgataa
     8581 taaaaaaact tttagaaata tctccaaaag catttaaata ttcatcatac tcgattaagt
     8641 ttaaaagagg agcattttct tgtaatagtt ttttattttt atgcctttct aaatcatttt
     8701 cactgattaa agaaagtaaa gaattcattt ctctagaaat cgaactttca ttacttaagg
     8761 cgtattcttc ttttaaaagt gctagaaaaa taatttgttc tttatgttca agattgtatt
     8821 ctttaaaaat atcagccaat acattataaa atttactttt ttttagtctt tctttgatat
     8881 gtttttcata aagtttaatt tgatttttta tttcactatt ataagcactt ttttgtataa
     8941 aacttaatct ttcgtataat tgaatacgca caaattcatc ttttaaatat tctaaataat
     9001 ctgcataagc ctcttgtttc tcaaagttta aacgaggttt tgcttctaaa aattctaaaa
     9061 aatattcact tagactaagc tcactttgca ataaggcaag agttaatgtt tgagttttat
     9121 tattttctaa acttttaaaa aaactcgaat tttgatttac aaaacctctt tcgataagtt
     9181 tttttaaatc ctccaaagca tcaagataaa gatacttatc atttccaaaa attgtcgata
     9241 ataaagtaaa ggcattgata gaagaaatag aaacgacata atttctacaa agctctctaa
     9301 gaatcaaagc ttcattttta gcacacttaa gctctttata aatttgagta tcttctatat
     9361 ttttcaaact taaaaaattt tttaattttt ccattatttt ttaaattcct taagctcatc
     9421 ttcattaaat tctacgcaaa tattttcatc taaaaaatga ccttcaaaag gtagataaca
     9481 aatttttagt tttccattat taagcaaaaa attattatta aattgtaaat tttgcagatc
     9541 ttcaaaacac tcatcacatg tatttttaag cttctcatgt aaaagatttt gaaatttttg
     9601 attttcagta ttatacaaat catttagttt tacaaatgcg tgagcattaa tatcataaac
     9661 aaaattattt aactctaaaa tagcacgact cataccatct tcataaaaat aataccattc
     9721 ttcaaaacta atttttccat cttgtaaaaa aataggtttt tggcgaattt gctcaaagct
     9781 aaatacaccc ttatgaacag gatgaaattc tttaaaatca tcattaaaac ctataaaatc
     9841 aagactacgc tttatacgaa tgccatcttg cgtttcgaca agttctaaag tagttgttcc
     9901 taaattttct ccttgaaaat ttttattatc atacgtaagc attttagaag aattgatttt
     9961 atatttttta cgctcatcct gccaaaaatc atttgtctta acgagcggaa tctctaaatt
    10021 tccatttata tcatcaacaa ttaaaaaact agaacttgtt tgatttttat ccctgtcaaa
    10081 aagtggggtc ataggtgcat tatcataaac tatggcaaaa atttctttat cctgcaaatg
    10141 ataaaaatac aattcacctt tataaacttg cgctaaagct agatttacaa agcaaaatac
    10201 cagtaaaaaa aatttcaaac tctatccttc aattttgaat atgcgttaag ataattttag
    10261 tatgtgaaat tttatcaaaa aaacttactt tattatcaca aacttgataa aaaatttcat
    10321 aattttttgc ttttaaattt tgctcaaaac cacaatcagt tttttctaaa tttttaccct
    10381 gccataaagc atttgccttt aaaatatcac ttaaaatatc atcataatat acatttttaa
    10441 aaaatttttg attaaacact tttttatcat aacacactgc attgatacaa attttatctt
    10501 tgattttgag ttcaaaaaaa gcttgcccta gtttataaac ttccaaattt aaagcattat
    10561 tttctttttt taaaaaagct gcgtcattga tttttatcat aggagaagca atcaaaacca
    10621 tcaagctttg acttgaaaaa ttttgatttt tcacactaca agcacaaaga aaaaaaataa
    10681 aacacagagc taaacaatgc ttcaaatttg accttattta agatttttaa aactgatatt
    10741 taactctaaa tcaagctctt ttacaagctt cattacagct tgtaaatcat caatttgttt
    10801 tgctacaaca cgaatttctt caccacgaat cgaagaatta actttaagtt tgctatcttt
    10861 gatagcttta ttgatttttt tggcattttc actatcaata gcatcgtttg ctttcaaatt
    10921 taaacgaaac attgctccac tttcacgaga aagctcttta atagcattag gattaattcc
    10981 tcttttgata agtttagaaa tcactatatc ttttaaaaca tcaagctttc cttcactaga
    11041 agaactgagt ttaaaaatac tctctttttc gcttaaatca atctcacact taattccttt
    11101 taagtcataa cgactatcaa gttctttttt agcttgttca aaagcatttt ttaactcttg
    11161 tttatccaaa gctgctgaaa tatcaaaact atgttcactt gccattttct atccattctt
    11221 ttaaattatt ataaactata tccattaaag catttaaagc ctccttgctc gcccacgcaa
    11281 catgaggagt gataataaga ttttctttat ttttaatgct taaaagtgga tgatttttca
    11341 tcataggttc aatttctaaa acatcaagcc ctacacgaat atttttttca tctatgattt
    11401 tagctaaatc attttcattg acaatcccac ctcttcctac attaatcaaa atcgcattat
    11461 cttttaaatg ctttaattct tcaaaggcga gtaaattttt ggttttttca tttaaaggtg
    11521 cgtggatact tataatatcg caagttttta ataaatcttt taattccaaa tgtacaaaat
    11581 ctgcgttttt attagctcca ctcgtagaat aataataaat ttcggctcca aaagcctttg
    11641 aaatttttgc cacttcttta cctatgcttc ctaaacctat aataccatgt tttttaccac
    11701 ttaaggtgtt taaaattcta ctataatctg taaaaatagg actttcacac catttaccct
    11761 ctttgctcca tttgtcataa taaggtattt gatttaaaaa agcaaacata aacgcaaaag
    11821 tatgttgcac cacactcata gtagaatacc cagcagcatt ttttacaata ataccttttt
    11881 ctttagcata ctcaatatcg atattattaa tccctgttgc agtttctaaa atgagtttta
    11941 aatttttaca agcatcaatc acatctttat caattacaac cttgtttgtc atggcgacat
    12001 tagcatcttt taaacgctct atggtttgct ctttatttgt tgtagtataa atttgcaaag
    12061 aaccaaattt ttcaaaaata cttaaatcat aatcccctaa agttgccgca tctaaacaaa
    12121 caattttcat ttctaatcct ttataatatg tcctacaaat ttagaataat tatcaagcac
    12181 aagtcctcct tttctaaatc ctaagccaca cccttcataa gcaaagaaaa cacctgcttg
    12241 atagtattcg ttttcacatg aattaaactc tacatattct tgataaataa ccttattatt
    12301 cccataagga cctacattct catgtaaagt ttttccatct ttaattatac tgatatttgc
    12361 gccttctcta ccaaaaacag gttttttaac atagttttta ccttccaaag gagtatcttt
    12421 tgtttctaaa agtaatggat gatttggata aagttcccat agaattttta aaattccctt
    12481 agattgaaat aaaagcgtat aagcaggatt taaaataatt gctctttgat tacgcataat
    12541 ttgagttaaa agcatggcaa gttcaccctc ttctatggct atatcttccc aaggaataag
    12601 cttaaaccaa tactcataat tttcaccctc tttaaaaaca ccctcttcac taaattccac
    12661 ctcatctaca aaggaaaaat tagtttgaaa acctgcttca ttggctatat gagaaagcaa
    12721 ttttgtagtg atttcttctt ctttacttcc tgcaacactt gaaaaaagaa ttttccatcc
    12781 ttgataatgc tcttcaaacc cttcaacact ttcatcaagg gtaataagtc ttttaaaatt
    12841 atccatcaaa ctttcataaa tgctgttaaa ttgtgcactt tcatccattc cattttgttt
    12901 taaaagcgcc cattgtaaaa tcgcactttc aaaaagagca gtaggggtat cagcattaaa
    12961 ttctataagt tttataggct tgccatcaag tccacccgct aaatcaaaac gcccatataa
    13021 atgccaatgc acttcatttt cccaactcat cttaatcgca tcaataagat taaaaggaat
    13081 tccaagctca tcaaaacgat cattatcaat cacttcttgc gctgcagcaa taaacatatc
    13141 ataaagttca tttactgctt cataataagc attagcttcg ctttctttaa cacaaactaa
    13201 cttattgcta atataatcac ttccatcttc atctgtatgc caagaaaaac ctatattttc
    13261 taaataatct ttttgaagtt tatctacttg tagtaattgc attatttatc cttaagagcc
    13321 aaaagaggaa ctagaacttg cagctttaga gcctccacca aaaaaacctg attttttagc
    13381 acttgaagta gaacttgttg tgcctgcttt attaaaacta ttgacacttc tttgataagc
    13441 actttgattt gaaaaagcac cgcgttgttg attagcaaaa ttttgattat tgaaaagttt
    13501 tgaacctatc caacttccca aaatagcacc tgcagcactt gcgagtaaag tttctcctaa
    13561 actcaatccc ccactactga tttgcccatt atctttagtt aaatttgaag ttccattgtc
    13621 aattttagct gcttcttctt taatcaaagc atccatttct tctttggata aaattctttc
    13681 tgtaccatta agatctttta aaactaccct tgtttcatca cttggatatt gatctttgat
    13741 tttatactgc cctggagctg tttcttcgat aattacaaaa gctccttgag cattagctgc
    13801 ttgatttaaa gtatctgcat tgtcattatt acttccacaa cctgctaaag cacctccagc
    13861 aacagctgct aaaccaccta tcataccaat ttgaatgatt tttttgattt ttttcataga
    13921 gtttatccta aaaacagaaa atttaaattt agaaatttta acaaaaaata ataaatactt
    13981 tttaatttaa taccaaatga agttcgtaga tataaaaaaa gccctttcgg gcttttgggt
    14041 tagagtcttg actcgtagcg tctaagcata taaagtcttt taagcatttt tttgcgtgct
    14101 gaaatttttt gttttttgcg aatttcagtc ataggctcga aaaatcttct tgctcttact
    14161 tcagttacaa ctagatttct atctacttgt tttttgaatt tacgatacgc ttcatcaaaa
    14221 gactcgttag gatgcacctt gattcctggc acagtcctca ccacctttct gtgtaaattt
    14281 ttgttgtgaa atataattat aaaacacttc ttattaattc taacttagaa agcatttaaa
    14341 aattgtttta gtttttatcg gttataatcc ttaattacaa agtgctaaaa aattataatt
    14401 aaggtctaaa aatgcaagga cacattacaa actatacaaa aaaacgatat tttgtatatt
    14461 taattgcaag tattatcata tttgccctac ctttcataag aattaatgag aatcattttt
    14521 ttcttttaag ttttgatcat tctaaattaa acctattttt tatttctttt tcaacacaag
    14581 aattttatct catgcctttt gttcttatat ttcttttttt atttattttt tttattacaa
    14641 ctttaggtgg aagaatttgg tgtgcttgga gttgtccaca aacgattttt agagttatat
    14701 atagagatat catacaaact aaatttctta aaattcgcaa aaatatcaat aacaaacaaa
    14761 aagaatatgg ggggcaatat tttaaaaaat ttcttggagt aataattttt tattttatat
    14821 ctttagttgc tgttagtaat ttactttggt actttattcc tcctgaagat tttttcaatt
    14881 atattcaaaa tcctggcgag catctacttt tacttggaat tttattttgt gctagcttac
    14941 tttttacttt ggatattacc tatttacaag aaaaattttg tgtttatgtc tgtccttatg
    15001 caagaataca atctgtaatg ttcgatcatg atacaatgca agtgatctac gatgaaaaac
    15061 gcgggggctt gatctatgat ggacacacca aacttcataa aaaaccgcct gagggagaat
    15121 gcataggttg tgaagcctgt gttagcatct gtccaactca tattgacata cgcaaaggaa
    15181 tgcaacttga atgtattaat tgtcttgaat gtgccgatgc ttgctctaag gtacaaagca
    15241 aatttaatcg tccaagtttg atcaattgga caagtgcaaa agctattgaa acgcgttcta
    15301 aggttcatta tttaagattt agaacgatag catattttat agttctttta attgctttat
    15361 tggctttaat catcatggga agcaaaaaag aaagcatgct tttaaatatc aatcgtagta
    15421 gtgaattata taatatttca aatgttaaag gtgaattagt catttcaaat gcttatacct
    15481 ttttgtttca aaatacagat tctaaacctc atgaatatta ttttacagca aatttagaag
    15541 gaataaatga tggaattgaa atcataagac caaacaaacc ttttaaatta aaagcaggag
    15601 aacaagtcaa aaaaatagtt gttatcaggg ctacaaaaaa tttagcaaat aatgataaaa
    15661 aagatgtaat ctttccttta catataaaag cttacgcaaa ggataatgaa aaaatttcgg
    15721 tttttagaaa aagtatattt gtatacccta aaagcactct tataaaggat aaaaatgaac
    15781 tcaaatagaa caccatcaca aaaagtttta gccagacaag aaaaaatcaa agcagtggcc
    15841 ttagagcttt ttttaacaaa aggataccaa gaaacaagtt tgagtgatat tattaaatta
    15901 tccggaggat cttattctaa tatttatgat ggttttaaaa gtaaagaagg gctattcttt
    15961 gaaattttag atgacatatg taaaaaacac tttcatctta tttattccaa aacacaagaa
    16021 attgaaaatg gcactttaaa agaaatttta acttcttttg gtttagcttt tatagaaatt
    16081 ttcaatcaac cagaagctgt agcttttggt aaaattatct attctcaagt ttatgacaaa
    16141 gatagacatc ttgccaattg gatagaaaat aatcaacaaa atttttccta taacatactt
    16201 atggattttt tcaagcaaca aaataattct tatatgaaaa aaaatgcaga aaaacttgct
    16261 gttctttttt gtactatgtt aaaagaacct tatcatcatc ttaatgtttt aattaatgct
    16321 cctttgaaaa ataaaaaaga acaaaaagaa catgttgaat ttgttgtaaa cgtttttcta
    16381 aatgggatca atggctccaa agcttaaaaa taattttatt aaccaaaatt aagatataat
    16441 tagccaaaaa tttttgtaat aaatattaca atttttaatt taatttttca aggcaaaacc
    16501 atgaaattat ttcaaaaaaa tactatttta gctttaggtg ttgtgctttt actcactgct
    16561 tgtagcaaag aagaagcacc aaaaatacaa atgccgcctc aacctgtaac aaccatgagt
    16621 gctaaatctg aagatttacc acttagtttt acttaccctg ctaaacttgt cagcgattat
    16681 gatgtcatta taaaacctca agttagtggc gtaatagtaa ataaactttt taaagctggg
    16741 gataaggtaa aaaaaggaca aacattattt attatagagc aagataaatt taaagctagt
    16801 gttgattcgg cttacggaca agctttaatg gctagagcaa cttttgaaaa tgcaagcaag
    16861 gattttaatc gttctaaagc tctttttagt aaaaatgcaa tctctcaaaa ggaatacgac
    16921 tcttctcttg ctacatttaa caattcaaaa gctagtctag caagtgctag agcacaactt
    16981 gcaaatgcaa gaattgatct agatcatacc gaaataaaag ctccttttga tggtactgta
    17041 ggagatgctt tagttaatat aggagattat gtaagtgcct caacaactaa actagttaga
    17101 gttacaaatt taaatcctat ttacgcagat ttctttattt cagatacaga taagctaaat
    17161 ttagtccgca atactcaaag tggaaaatgg gacttagaca gcattcatgc aaatttaaat
    17221 cttaatggag aaaccattca aggcaaactt tattttattg attcggttat agatgctaat
    17281 agtggaacag taaaagccaa agccgtattt gataacaaca actcaacact tttaccaggt
    17341 gcttttgcaa caattacttc agaaggtttt atacaaaaaa atggctttaa agtgcctcaa
    17401 atagctgtta aacaagatca aaatgatgtt tatgttcttc ttgttaaaaa tggaaaagta
    17461 gaaaaatctt ctgtacatat aagctaccaa aacaatgaat acgccattat tgacaaagga
    17521 ttgcaaaatg gcgataaaat cattttagat aactttaaaa aaattcaagt tggtagtgaa
    17581 gttaaagaaa ttggagcaca ataatgtttt ctaaattttt tatcgaaaga cctgtttttg
    17641 cttcagttgt tgcaattatc atttctttag ctggagtcat aagtcttaca aatttaccta
    17701 tagaacaata tccttcttta actcctccta cagttaaagt aagtgcaact tacacaggag
    17761 ctgatgcaca aaccattgct tcaacagttg caagtcctat cgaagatgca atcaatggcg
    17821 cggataatat gatttacatg gattcaactt caagttcttc aggaactatg agtttgactg
    17881 tctattttga tatcggtaca gatcctgatc aagccaccat agatgttaat aatagaattt
    17941 cagccgcaac tgcaaaaatg ccagatgcag ttaaaaaact tggagtaaca gttagaaaaa
    18001 cttcctcaac aacacttgct gcaatttcta tgtattcaag tgatggttca atgagtgcag
    18061 tagatgtata taactatatc actttaaatg tgttagatga gttaaaaagg gttccaggag
    18121 ttggagatgc aaatgctata ggaaatcgta attattcttt aagaatttgg ctcaagcctg
    18181 atttattaaa taaatttgga atcacagcta ctgatgtaat ttctgcggtt aatgaccaaa
    18241 atgcccaata cgcaactggt aaaattggcg aagaacctgt aactcaaaaa tccccttatg
    18301 tttattcaat cactatgcaa ggaagattgc aaaatcctag tgaatttgaa aacattattt
    18361 taagaacaaa tgatgatgga tcatttttaa gacttaaaga tgtagctgat gtggaaatag
    18421 gatcacaaca atacagctca caaggacgat taaatggcaa tgatgcagtt ccgattatga
    18481 tcaatcttca atcaggggca aacgcattgc atacagcaga acttgttcaa gctaaaatgc
    18541 aagaactttc aaaaaatttc ccaaaaggtt taacatataa aattccttac gatacaacaa
    18601 aatttgtaat agaatcaatc aaagaagttg ttaaaacttt tgttgaagct ttaattttag
    18661 ttattattgt tatgtatatg ttcttaaaaa atttccgtgc aacccttatt cctatgatag
    18721 ctgtacctgt ttcattgtta ggaacttttg ctggacttta tgttttaggt tttagtatta
    18781 acctacttac gctttttgct ttggttttag ccatagggat cgttgtagat gatgcgatca
    18841 tagttgtaga aaatatcgat aggattttac atgaaaatga acaaataaac gtaaaagatg
    18901 ctgccattca agcgatgcaa gaagttagct ctccggttat ttcaattgtt cttgtgcttt
    18961 gtgctgtttt tgtaccagtt tcttttatat caggttttgt tggagaaatt caaagacaat
    19021 ttgctcttac cttagctata tctgtaacta tatcaggttt tgttgctctt accttaacac
    19081 cttctttatg cgcactcttt ttgcgacgta atgaaggaga accatttaaa tttgtaaaga
    19141 aatttaatga tttttttgat tggagcacct ctgtatttag cgcaggagta gcatatattc
    19201 taaaaagaac cattcgtttt gttttaattt tttgtattat gcttggagcg attttttatc
    19261 ttaataaagc tgtgccaaat tctttagttc ccgaagaaga tcaaggtttg atgattagta
    19321 ttatcaacct tccttcagct tcagcactcc atagaacaat ttcagaagtt gatcacataa
    19381 gccaagaagt tttaaaaact aatggagtta aagatgcaat ggctatgata ggatttgatc
    19441 tttttacaag ttcactcaaa gaaaatgccg ctgcaatgtt tataggtttg caagactgga
    19501 aagatagaaa tgtaagtgct gatcaaatta tagccgaact taataaaaaa tttgcttttg
    19561 atcgcaatgc ttcaagtgta tttataggct tacctcctat acctggattg agtatcacag
    19621 gcggttttga aatgtatgtt caaaacaaaa gcggaaaaag ctatgatgaa atacaaaaag
    19681 atgtaaataa acttgttgct gcagccaacc aaagaaaaga actatcaaga gtaagaacaa
    19741 cacttgatac aactttccct caatacaagc ttataattga tagagataaa ttaaaacact
    19801 acaatcttaa catgcaagat gtttttaaca cgatgaatgc aactataggc acttattatg
    19861 ttaatgattt ttctatgcta ggtaaaaact tccaagtaaa tatccgcgca aaaggtgatt
    19921 ttagaaatac acaagatgca ttaaaaaata tttttgtaag atcaaatgat ggaaaaatga
    19981 taccacttga ttctttctta actttacaaa gaagttcagg gcctgatgat gtaaaacgat
    20041 tcaacctttt cccagcggca caagttcaag gtcaacccgc accaggttat acttcaggtc
    20101 aagctataga agcgattgct caagtagcaa aagaaacttt aggggatgat tattccatag
    20161 cttggagtgg atcagcttat caagaagttt ctagtaaagg aacagcaagc tatgcttttg
    20221 ctttaggtat gatatttgtc tttttaattc tagctgccca atatgaaaga tggcttatac
    20281 ctttagcagt tgtaacagct gtaccttttg cggtatttgg atcattttta ttggtatatt
    20341 taaggggatt tagcaatgac atatattttc aaacaggact tttgctcttg attggacttt
    20401 cagctaaaaa tgctatctta atagtagaat ttgcaatgga agagcgcttt aaaaaaggca
    20461 aaggagtttt tgaagcagct gttgcagcag caaaacttcg ttttcgtcct atcataatga
    20521 cttctttggc atttactttt ggggtcttgc caatgatttt cgcaacagga gcaggaagtg
    20581 cttcaagaca ctctttagga acagggctta ttggtggaat gatcgcagca tcaactttag
    20641 cgatattctt tgtgccttta tttttctatc ttttagaaaa ttttaatgaa tggctagata
    20701 aaaaaagagg taaggttcat gaataaaata atttcaatta gtgctatagc aagttttact
    20761 cttttgattt cagcttgctc tttaagtcca aatttaaata ttcccgaagc aaactatagc
    20821 attgataata agcttggagc cttatcttgg gaaaaagaaa acaatagctc tatcacaaaa
    20881 aattggtgga aagactttga tgatgaaaat ttaaataaag tggttgattt agcacttaaa
    20941 aataataatg atttaaaact tgccttcata cacatggaac aagctgctgc tcaattaggt
    21001 atagatttta gcagtttgtt gccaaaattt gatggtagcg caagcggtag tcgtgcaaaa
    21061 acagctataa atgctccaag caatcgaacc ggggaagtaa gttacggtaa tgattttaaa
    21121 atggggctta atttaagcta tgaaatcgat ctttggggaa aatatcgcga tacatatcgc
    21181 gcctcaaaat caagctttaa agcaagtgag tatgattatg aagctgcaag actttctgtt
    21241 atttcaaata cagttcaaac ttattttaat cttgtaaatg cttatgaaaa tgaaaatgct
    21301 cttaaagaag cctatgaatc tgcaaaagaa atttatagga tcaatgatga aaaatttcaa
    21361 gttggcgctg taggtgaata tgaacttgct caagcaagag ccaacttaga aagtatggct
    21421 ttacaatata atgaagcaaa attaaataaa gaaaattacc ttaaagcttt aaaaatttta
    21481 acttcaaatg atttaaatga catactttac aaaaatcaaa gctatcaagt ttttaatctt
    21541 aaagaatttg acattccaac tggaatttca agcaccatct tgcttcaacg tccagatatt
    21601 ggctcttctt tagaaaaatt aactcagcaa aattatcttg ttggagtagc tcgcacggct
    21661 ttcttaccta gcctttcttt aacaggatta ttgggatttg aaagtgggga tttagatacc
    21721 ttggttaaag gaggttctaa gacttggaat ataggtggaa actttactct gcctattttt
    21781 cattggggtg aaatttacca aaatgtaaat ttagctaaac ttaataaaga tgaagctttt
    21841 gtaaattatc aaaatacttt gattactgct tttggagaaa ttcgctatgc tttagtagct
    21901 agaaaaacta tacgcttaca atacgataat gcacaagcaa gcgaacaatc ttataaaaga
    21961 atctatgaaa ttgctaaaga acgctatgat ataggagaaa tgtctttgca agattattta
    22021 gaggcacgtc aaaattggct taatgctgcg gttgctttta ataatactaa atattcttat
    22081 gccaattcca tagtagatgt aatcaaagca tttggtggag gatttgagca aagtgaagat
    22141 acgagtaaaa atataaaaga agaatcaaaa aatttagata tgtcttttag agaatagttt
    22201 gttctattct ctaaataaat caaaaatctt tgtctaaatc tgcatctgta atttcataag
    22261 ccttgtaaat agcaggcaat aattttctta tagcataatc aaaatgataa aattgcttat
    22321 atacctcttc tggatttaaa tttttagcat tcttaaaatc aaatacttca gtattattga
    22381 ttttggcaat attttcatca aaataagagt aaaactctgc tctttgttta aacaaagcat
    22441 ttaaattttg aacaattttg gctttatcca ttttatatcc tttttaaata atttaaaaac
    22501 ttaatcccat tttttattta agaaataaaa aatttactcc tattttagct aaaaattgat
    22561 aaagttatgt cttaaatatt ttaatatata ggccacttat gaatttattt caaaatttag
    22621 ctttaaaata ctctcatact atgatggaaa aatccctcca aaaaggtttc aatgtcgaac
    22681 ttttaaaaca acccaaagaa aaaattccaa aacaagacaa aagctatatg ctttatgccc
    22741 atgtaccttt ttgccatact ttttgtcctt attgtagttt tcataaatac tattatgatg
    22801 aaaatttagc caaagtatat tttcaaaatc ttagagaaga aattaaaatc atgaaagata
    22861 aaggttttga ttttagctcc atgtatgtgg gtggtggtac aacactgatt aatgaagagg
    22921 aattattaaa aaccttagaa ctttgtaaaa agttatttaa cataaaagaa atttcatgcg
    22981 aaagcgatcc aaatcatatt gatccaaata agctttctat gtttaaaggt ataattgatc
    23041 gtttaagttg tgggattcaa agttttgatg atgaaacttt aaaaaaagtg gcaagatata
    23101 ataaatttgg ttcatctaaa gaacttcaag aaaaaatttc aaaagcttta ggaattttac
    23161 ctatttttag tatagatctt attttcaatc ttccaggaca aagcgaaaaa caacttttaa
    23221 atgacttaga aattgctaaa aatttagccc cgcaacaaat cacaacctat cctttaatga
    23281 aatcaaatct taccaaagat aatatcgcta aaagtttagg agtaagcatt aaagataatg
    23341 aatttactta ttatcaaatc atacgcgaat tttttaaaga ctatactcaa aacaatggtt
    23401 ggagtttttc tttggaaaaa aataaactca atgacgaata tgtcagttct catcatgaat
    23461 acctaggagt gggcagcggg gcttttagct ttttagatgg ggagctttta attaatgcat
    23521 ttaatctaaa tgattatgct aaatttatac aagaaaaaca aaatgctaat atagccaaag
    23581 cttgttttga taaaaaagaa attatcaaat atatcttttt aactgaaatt ttttcaggga
    23641 aaatagaaat tgataaattc aacaaaactc taaattgcaa cctcgaaaaa gaacttttca
    23701 tagaactttt agggcttaaa acaagtggtg ccatcataaa agatcaaaat gctttaatcg
    23761 caactgaatt tggtcaatat ctttttgtgg ttttaatgaa agatttttac acaggaatgg
    23821 atcttgtgcg tgcagtattt agagatgata agcgtcttaa aaataaagat tatatcgata
    23881 tcatgaaaga aaatattgat ccgcttaact ccgctagtat ggaatttaaa gcggagacaa
    23941 actaaaaggg gcgaataacc atcattaaag cgataataat aaacattata gttgggaatt
    24001 cattataaat tctaaagtat ttcccacttt tagcagaagt atcatttgct aaagctttta
    24061 aacaataata attatgtata tgaaaaataa tcaaaagtgt aacacaggta agtttaacat
    24121 gcataaaacc cgcacctacc attaaaactt ccttatgagc atgtaacatt aaacttcctg
    24181 tgattaaagt tacaatcatt gcaggagttt gtatataaaa ataaagtttt ctttcttgaa
    24241 tttttacaat ctcgacaaaa cctttattgt ctttatgttc agcatgatac acaaaaagac
    24301 gaggtaaata aaaaagtcca gccatccaag aaacaaatgc caaataatgc acccatttaa
    24361 tccaaaaata ataatcatta atccattctg tcatcttttt tccttttttt aaatatttct
    24421 tgtattaaaa tcaaagccac acttatattt atcatgacat ctgcaacatt aaaaatagca
    24481 aaattaaacc atttatgcca aaaaaacata tccactacac ctccgtgtat aaaacgatcc
    24541 aataaatttg aaacgccagc accaagcatc attccaaaag ctatgctatg agtttttaaa
    24601 agtgtttttt gccaaaaaag ataaataaaa agcacgacaa ttaaagcaag atgtaaatat
    24661 tttaaattat gttctaaaaa actcaacatt gaaaaagcta cgcctgtatt tagagcataa
    24721 gttaaatcta agtattcact ctgccatcta agtcctgcta aagttaagga ttttacccat
    24781 tgatcaagga caaaaaccaa aacaaaggca ccccaaaaat aaaaaataaa tttaaaagtt
    24841 ttagccattt aaagctttct taaaaaactc cacaacattt ttcatttctt tttctaagag
    24901 cttaatatct ttggcttcta gtaaaagtct tatcaaattt tctgttccag aatagcgaaa
    24961 taaggtattg atatttttat tttctaaa
//
LOCUS       DARBAC010000008        24836 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.008, whole genome shotgun sequence.
ACCESSION   DARBAC010000008 DARBAC010000000
VERSION     DARBAC010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24836
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.008"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            25..1026
                     /gene="mltG"
                     /locus_tag="SB799_000238"
     CDS             25..1026
                     /gene="mltG"
                     /locus_tag="SB799_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEG0867507.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSSIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLELDKDMLLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1106..1537
                     /gene="flgB"
                     /locus_tag="SB799_000239"
     CDS             1106..1537
                     /gene="flgB"
                     /locus_tag="SB799_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEG0867508.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDNKELQLAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1547..2041
                     /gene="flgC"
                     /locus_tag="SB799_000240"
     CDS             1547..2041
                     /gene="flgC"
                     /locus_tag="SB799_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEG0867509.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2048..2344
                     /gene="fliE"
                     /locus_tag="SB799_000241"
     CDS             2048..2344
                     /gene="fliE"
                     /locus_tag="SB799_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEG0867510.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2351..4159
                     /locus_tag="SB799_000242"
     CDS             2351..4159
                     /locus_tag="SB799_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEG0867511.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDECLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNNQTSTNN"
     gene            complement(4156..5925)
                     /locus_tag="SB799_000243"
     CDS             complement(4156..5925)
                     /locus_tag="SB799_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HEG0867512.1"
                     /translation="MQEERNSLKYFKFISWSIFTLVLIFILIRYDELANLLAGVAILL
                     IGMTNLGIGFKAFSGGLLEKILAKSTDTKIKSILFGTLSTLIMQSSTLVSIITISFLS
                     AGLISLGAGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIGVLFFFQKDSVLK
                     GLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVFLGLGALLTGVIQ
                     SSTATMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTNIEGKKLAFANCI
                     FNFGIAFLIVLIFPYFIHFLNFLSIVLNIEDIALKVALFHTLFNLIGVVLFSFFTPQI
                     VLFLNKIVKAPKDKNKDKPLYLDSSLVKFSDTAIEALRKESEHLYNNTYAIVAHAIGF
                     SRKDIQSDKSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETK
                     NHKIFTFKMAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIE
                     ELRVVEDREKLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKITTAEGISILNDTT
                     FAAKIAEELIGAVEVIFSKDISN"
     gene            complement(5929..6363)
                     /locus_tag="SB799_000244"
     CDS             complement(5929..6363)
                     /locus_tag="SB799_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867513.1"
                     /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDEQTLLEPIKMDIYPKF
                     CDLIDEKIREFKENVQNANLTLKNSDQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMNEFEKLKG"
     gene            complement(6363..6680)
                     /locus_tag="SB799_000245"
     CDS             complement(6363..6680)
                     /locus_tag="SB799_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEG0867514.1"
                     /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLAL
                     KGC"
     gene            complement(6677..8503)
                     /gene="htpG"
                     /locus_tag="SB799_000246"
     CDS             complement(6677..8503)
                     /gene="htpG"
                     /locus_tag="SB799_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEG0867515.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEIDDANK
                     EEQGTSITLYLKDDEFANAYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKVEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLIAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
     gene            complement(8576..8944)
                     /gene="crcB"
                     /locus_tag="SB799_000247"
     CDS             complement(8576..8944)
                     /gene="crcB"
                     /locus_tag="SB799_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEG0867516.1"
                     /translation="MLNTLLVVGFGGFIGAILRMLSINLVNKFFPYSISLGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYFNFTLN
                     IILNVFLCLFAAWLGFIIFK"
     gene            complement(8938..9630)
                     /locus_tag="SB799_000248"
     CDS             complement(8938..9630)
                     /locus_tag="SB799_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEG0867517.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVVFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDDKWLENTRKKM
                     QELLDQERAKLC"
     gene            complement(9611..10807)
                     /locus_tag="SB799_000249"
     CDS             complement(9611..10807)
                     /locus_tag="SB799_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEG0867518.1"
                     /translation="MKILLTLIFSVVVLFGRGEISVFSGQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLSNKDFSHLVASFLEIKKVKASYFDDANIIMMVELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKDSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYTLWFLAVLFGALFVWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10804..11451)
                     /gene="purQ"
                     /locus_tag="SB799_000250"
     CDS             complement(10804..11451)
                     /gene="purQ"
                     /locus_tag="SB799_000250"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HEG0867519.1"
                     /translation="MKVAIIRFPGTNCEFDTAYAFEKLGVKTQIVWHEEKEFDTDLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQNLRVVSNDNAFLKNFKKDEIINLPIAHGEGNYYADEATLKELQDKDL
                     ITLKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDIGLKMLKGFLF"
     gene            complement(11453..11698)
                     /gene="purS"
                     /locus_tag="SB799_000251"
     CDS             complement(11453..11698)
                     /gene="purS"
                     /locus_tag="SB799_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEG0867520.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSVIEDYELVIEKE"
     gene            complement(11707..12417)
                     /locus_tag="SB799_000252"
     CDS             complement(11707..12417)
                     /locus_tag="SB799_000252"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEG0867521.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCKISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12419..13753)
                     /locus_tag="SB799_000253"
     CDS             complement(12419..13753)
                     /locus_tag="SB799_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEG0867522.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            13871..14161
                     /locus_tag="SB799_000254"
     CDS             13871..14161
                     /locus_tag="SB799_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HEG0867523.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAVEENDIQSIEELNKAIDMFMK"
     gene            14273..16846
                     /locus_tag="SB799_000255"
     CDS             14273..16846
                     /locus_tag="SB799_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0867524.1"
                     /translation="MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLRALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELAEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(16874..18805)
                     /locus_tag="SB799_000256"
     CDS             complement(16874..18805)
                     /locus_tag="SB799_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEG0867525.1"
                     /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTASLGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKANMKFNESEIIF"
     gene            complement(18802..19353)
                     /gene="maf"
                     /locus_tag="SB799_000257"
     CDS             complement(18802..19353)
                     /gene="maf"
                     /locus_tag="SB799_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEG0867526.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLDKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITHQVGNLSTALGLDIQTLKAYL"
     gene            complement(19353..21881)
                     /gene="alaS"
                     /locus_tag="SB799_000258"
     CDS             complement(19353..21881)
                     /gene="alaS"
                     /locus_tag="SB799_000258"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEG0867527.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEFLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGEEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYIYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELLMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDAGWVMLKNTPFYATSGGQSADSGFMAKREVL
                     DTQKFFNLNLSFVKAGEELKVGDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALSKEELENIEKRVNEMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            21996..23069
                     /locus_tag="SB799_000259"
     CDS             21996..23069
                     /locus_tag="SB799_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEG0867528.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGAKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRALDIGKDDEVIVPSFTFIATAEVVALVGAKPVFVD
                     INLSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQTYNANLKNCQIPQIDPNAFS
                     AYAQYSVLVEDRASVLQKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23074..23940
                     /locus_tag="SB799_000260"
     CDS             23074..23940
                     /locus_tag="SB799_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEG0867529.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLAIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSVKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCELEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQANHLASTSD
                     AYKVQEILERFA"
     gene            23937..>24836
                     /locus_tag="SB799_000261"
     CDS             23937..>24836
                     /locus_tag="SB799_000261"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEG0867530.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCNKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNESDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFD
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLAK
                     CDYDLISCPNDSDEFMEFILNSIN"
BASE COUNT         8765 a         4074 c         3529 g         8468 t
ORIGIN      
        1 aaaaaatcaa attggatact agagatgaca atcccatttt taagcactat aaacaaagct
       61 aatataagca caacaaaaaa tacaacaata tataaaattt tctttttcat acgcaacttc
      121 tttttgatat ttattttggg gattttttat tatctaactc agcctttaaa aagcaattct
      181 gtggtattta ttccccaagg ttcaatttct caaattataa catatttaaa gcaaaataaa
      241 tatcagatga gtagtattga taaatatatt ttattttttt taggacaccc tcaatcaggc
      301 tggatcaaca taggcacaaa agatttaaat agggctgaat ttctacataa actcactatt
      361 gctaaagcag cacttcaaac cattactctt atcccaggag aaacaagcgt aatcttttta
      421 gaacaagcag ccaaacaact tgaacttgat aaagatatgc ttttaaaaga atttcaagct
      481 caagctcctt atgatgaagg agttttttta ccagaaactt ataaaatccc aaaaggcatt
      541 acagaaaatc tactcattca aatgctttta aaccatgctg aaatttctaa taaaaaaact
      601 tctgagaaaa tttttggtga ttataatcca aaaaaatggc accaatatat catcatcgct
      661 tctgtaatac aaaaagaagc tgctaatgac aatgaaatgc ctatagttgc aagcgtaatt
      721 tataatcgac ttaaaaaagg tatgaagctt caaatggatg gaactttaaa ttatggaatt
      781 tactcccatg taaaagttac cccacaaaga ataagacaag ataatagctc ttataatacc
      841 tataaattta caggattgcc taaagaagcg gtttgtaatg tttctttagc tgctattcgt
      901 gcagctattt ttcctttaaa gacagattat ttatattttg tgcgtgataa aaatactgga
      961 gttcatattt ttagcacaaa tatagatgat cacaataaag ccataaattt acaaaaagga
     1021 aaataatttt gatattttta tacaaaatag ttaaattgga acagtatttg cttgttaata
     1081 ttaaaaatta taaaaaggat aaaaaatgat taacccattt aaatcaaaag aactggtcac
     1141 tggtgcttta gcgggtagaa atctaagaaa tcaactcatc aatgccaatc ttgcaaatgt
     1201 tgatactcct ttttataaag caagagatat tgaatttgaa acagctttgg taaatcgtgc
     1261 aaatgaaatt ttcaaaaaaa atgataataa agaattgcaa ttagccgtaa ctgaagaagg
     1321 gcatcaaaaa ccttggaaat tccctgatcc tagtaaatct actatttact taagagatgg
     1381 tcatttagca agaaatgatg caaatactgt tgatctagat gtagaaacca cagaaatgag
     1441 taaaaataca gttatgataa cagctcttga tggagtttta agaagacaaa gcaatatctt
     1501 tagttctata cttgatgcaa gctctaaatt aagttaaagg taaattatgg catacttaag
     1561 tgattttgat attagtggtt atggtttaag tgctcaacgt tttagaatga atgttattag
     1621 ctctaatata gctaatgcaa acactacaag aacagctgaa ggtgggcctt atagaagacg
     1681 cgaagtgatc tttaaagcaa cagattttga taagctttta aatgagcaaa ttaacaaaga
     1741 taataatttt ttaaaatatg aaaatccttt aaatgatcca agttcgccag aagaagctaa
     1801 acctgctatt caaagtgttg tagtggataa agtggtcaga gatgacaaag attttcgtat
     1861 gaagtatgat ccaagccatc ctgatgcaaa tgctgaaggt tatgtagcgt atccaaatgt
     1921 aaaccctgtc attgaaatgg cagatttgat tgaagctaca agagcttatc aagccaatgt
     1981 aagcgctttt acaagtgcaa aaactatagc tcaaagtgcg attgatttat taagaggata
     2041 ataaaaaatg aacaatatta atgatttaag attaaataat aatatttcaa ataccaacaa
     2101 aagtcaaaat tccacaggaa ttggtgatga atttgccaag atgcttaaaa atgaaatcga
     2161 tgatttaaat aaagcacaag aaagtggaga agctgcaatg acagacattg ccacaggaca
     2221 agtaaaagat ttacatcaag cagctatagc tatcactaaa gctgaaagca gtatgaaatt
     2281 tatgctagaa gtaagaaata aagcgatcag tgcttataaa gaaatcacaa gaactcaaat
     2341 ttaaacccta atgcaagaat ataaaaaaaa tagggtttca aaagttgcct ttgcctactg
     2401 catggcactt ttgtttatga ttatttttat cagctctact ttttttctta catcaaaacg
     2461 tcatatacct aacactgaaa aagatcaata cgctcttgct ctaagaggat cgattataac
     2521 taaagataat tttactatca caagttctaa acaaatttat cgtgctgaaa ttgatcttag
     2581 aagtattaac aaagataaat ttgatctatt tttaaagctt tttcaaattt atagtgggat
     2641 aagtaacgat caagtagcag atattaaaaa aagaatgcaa aatcaaaaaa aacgctctta
     2701 taattttgtt cttttgcaaa acttagattc caagcaagca agctatctta aagaccttgc
     2761 taaaaaactt tatatacaag gttttttcaa agcttttaca aacaactctg gaagagttga
     2821 aacaagagga ttaaatatca tcgaacatga agaagataga atttacatgt caaaagattc
     2881 ttttactcct attatcggtt ataccaaaat gatattagat ccagaaagtg gaattttaaa
     2941 aaatatagga gttaaaggtt tagaaaaata ctacgatgaa tgtctaagtc ctgttcaaaa
     3001 tgaaaaaatt caaggactta aagatatagg tggaaatatt attttaaatc taaattcact
     3061 acagcaaaaa aagatcaatg gttgtgattt atatttaaat ctttctttaa aactgcaaaa
     3121 aagcatagag aaagctatag atcaaagaaa tgaggattta aaagccaatg aaatcatcgt
     3181 tggggtaatg gaaagcaaaa caggaagaat tttagctcta gcaagctcaa ggcgctatga
     3241 tccgcaaaat cgtggaaaag atctatcagt tcttaatgca agcgctatag aatacggtta
     3301 tgaagcaggt tctgttatca aaccttttat ctttacaaca gccttaagac ttggtaaaat
     3361 aaaaatggat gaagtgatta atacttatgg cggttcttac aagctaggac gttttaccat
     3421 caaagacgat cacaaaatgg acaaaatgac tatggaggaa gttataagat attcttcaaa
     3481 tataggcatg atacaaattg ctaaaagact taacaatata gaaatcgtat cagggcttaa
     3541 aatatttaaa tttggcgaaa aaagtggtat tgatctaccc tatgaacaaa aaggagaaat
     3601 tccaaatcct aagcgcttaa gagatataga aaaatctgtt ttaagttatg gttatggact
     3661 taaaacaacc tttatacaac tccttgcagc ttataatgtt ttcaacaatg atgggtttta
     3721 tatcacacca cgtttagctg aaaaattcta tcaaaatgga cgctttacaa atcttgatga
     3781 tgatgtaaaa aaagaaaaaa ttctttctag cgaagccgct aaaacgatgc aaaatgttct
     3841 tataaatgtt atagaaaaag gaacaggaaa aaaggcaatt acacaaggta ttattgcagg
     3901 aggtaaaaca ggaacggcaa gaatagccga aagacaaggt tacacctcaa atcgctacaa
     3961 tgcatccttt tttggttttg caaatgattt aaatcacgcc tataccatag gagttctcgt
     4021 aagacatcct actaaacctt atagttatta tgctgcacaa agtgctttgc ctatgtttaa
     4081 agatgttgtt gatattttaa tcaatgaaga atttctaacg cctatacaag acaataacca
     4141 aactagcaca aacaactagt ttgatatatc tttagaaaat atcacctcaa cagcacctat
     4201 aagttcttca gcaatcttag cagcaaaagt tgtatcatta agtattgaaa ttccttcagc
     4261 tgttgtgatt tttcttactg aaataagatg ttcaacattg cttaaggtta aagtatcgat
     4321 ttcttttaaa atttcttttc ctttttgaag atttttaata atcaaataaa gcttttcacg
     4381 atcttcaacc actctaagct cttctatact tcttaaaagc tctcctaaat tcgatctaat
     4441 tttattgtac tctaaagcca aaaattcatt agaagaacta gaatatttct taatatttgc
     4501 ttggataatt tttaaatttt tagttgtttc ggctaaattt ttagctgcca tcttaaaggt
     4561 aaaaatttta tgattctttg tttcatcgtt aatataaact tgtgctttag ttgaaaaatc
     4621 gataatagct tcaaaaagaa cctttatcct agtttgatac aaatagtcca aatccacatt
     4681 tttactaaac cactttttat tttctaaaat ttctttaaaa cttttatcac tttgtatatc
     4741 tttacgacta aaacctatag catgagcaac aattgcatag gtattgttat aaagatgctc
     4801 gctttctttc cttaaagctt cgatggctgt gtcactaaac ttaaccaaac tactatcaag
     4861 atataaaggc ttgtctttat tcttatcttt aggagctttt actatcttat ttaaaaaaag
     4921 aacaatttga ggagtaaaga atgaaaaaag cacaacacca attaaattaa acaaagtgtg
     4981 aaataatgct actttcaaag ctatatcttc tatgtttaat acaatggata aaaaattaag
     5041 aaaatgtata aaataaggaa aaataagcac tattaaaaaa gctataccaa aattaaaaat
     5101 acaatttgca aacgctaatt tctttccttc aatattagta cttaaagaag ctaaaacagc
     5161 cgttacaact cctccaacac tagtgcctaa agttgctgct aaggaatttt ccaaactgat
     5221 ttgtcctgca agtaaagcag cgacaataat agccattgta gctgtgcttg attgtataac
     5281 tcctgtaagc aaagcaccta atcctaaaaa aacaaaaact cctttaaacc cagcaaaatc
     5341 aaaacgagaa agatcaatta tatgtttaaa attttcaaaa ccacttttaa tataatccac
     5401 acccaaaaag aaaaatccta taccaataaa aatattacct aaacctttta aaacactatc
     5461 tttttgaaag aaaaataata ctccaataat caaaagtggg atagctagca ttgaaatttt
     5521 aatatttgtc aaaccaacaa tcagccaaga acttgccgta tttcctaaat ttgctccaaa
     5581 aataatccct atgcccgcac ccaaagaaat aagccctgcg ctcaaaaaag aaatcgtaat
     5641 aatagaaact aaagttgaag attgcataat taaagtactt aaagtaccaa aaagtatact
     5701 ttttatcttt gtatcggttg acttcgctaa aattttttca agcaaaccac cactaaaagc
     5761 tttaaaacct atacctaaat tagtcattcc aataagaagt attgccactc ctgctaaaag
     5821 attggcaagc tcgtcataac gaattaaaat aaaaatcaga actaaagtaa aaatactcca
     5881 tgaaataaat ttaaaatatt ttaaagaatt tctttcctct tgcaatgcct aaccttttag
     5941 tttttcaaat tcattcatca gaaattctct taaattttca gcttcttctt cacctttttc
     6001 tagatactca agcaataaat tttctaattc tttcaaaaaa gaaaaaagtt cattttgcca
     6061 gatgctatcg tttttattgc ttaaattcat ggtttgtatg aaagtcaatt ctctgcttaa
     6121 atccccaagt ttttctaaaa attcatcttt ttgatcagaa ttttttaatg ttaaattagc
     6181 attttggaca ttttctttaa attctctgat tttttcatcg attaaatcac aaaatttcgg
     6241 ataaatatcc attttaatag gctctaaaag ggtttgctcg tctatattta aagtaagctt
     6301 tttaacagca aaataaagag ctaaaaaaga caaagctgct atgagtaaat aaattcctag
     6361 cattaacaac ccttaagggc tagcattccg ccatctaaat tgatgctttc aagtcccaat
     6421 ttttcagcta taaattcagc tgcaaccatg cttctatgac cactacgaca aataaaagca
     6481 agttttttac tttcatctct tttgctttga aattcatcta aaaatttagc atttaaaagc
     6541 ccttgattat catataaagc cacacattgc gcattaggta aaataccttc ttcccattct
     6601 aaaggagtac gcacatcaaa aatttgatat gcgtttaaat cttgctttgt ccaaagactt
     6661 gcagggatat tttctatcat gaaaaagcct tattgataat ttttgtaaga cttgcattaa
     6721 attcagcagg attatccacg cccatacctt cgcttagttt tgccatattt aaaactaggg
     6781 ttgctatatc tgcactaaaa ctttcgttgt ttttaagacc tgtaaaaata gcgtgttttg
     6841 gattgatttc taaaataggt ttgaaatttt gttcttgacc catttgtttt aagagttgtt
     6901 gcatagcaaa atcaggttta tttttatcat aaactataca acttgggcta tctttcaaac
     6961 gactggttag tcttacatct tcaacttgat cttttagaag ttctttaaat ttagctataa
     7021 gtggagcaaa ggtatttttt tcttcatcgc ttagttcatt tttatcttct acttgattga
     7081 tggctacaaa tttcaaacct tcaaattcta gcataggagt tactaaagaa tcaatctcat
     7141 catccatgag taaaacttct atattttttt gtttatactc ttcaagtaaa ggagaggttc
     7201 ttaataaact ttcattattt cctgctatat aaaaaatttc cttttgttcg ccttgaaggt
     7261 catttttata ctcttctaaa gagcgtaaat tttcaccttt ggtgctttta taaagcatga
     7321 gttttaaaag actatctttt tccccgccaa agccataaag tccttctttt aataccttac
     7381 caaaggtttt aaagaaagat aagtattttt ctttatcatt gtttttgagt ttttcaagtt
     7441 cgcctaaaat ctttttaacg ctagcttctt taacgccttt taaaatttga ttttcttgta
     7501 aaatttcacg acttacatta agtggtaaat cttctacatc gataatccct cgcacaaaac
     7561 gcaaataagt tggtaaaagt tctttatcgt catcgctgat aaatacgcgt tttacataaa
     7621 gttttaagcc gctttgataa tccacacgga ataaatcaaa aggtgcattt tgtggtatga
     7681 aaaataaaga attgtattct aattttcctt cacttttagt gtgaagataa agtaaaggtt
     7741 tgtttgaatc atgaaaattt tgctcataaa atctttcata atcttctact ttaaggcttg
     7801 atttttgcat tctccataaa gcgttggctt tattgatttg agaaatttta agttcagttt
     7861 ttccttcttc ttctccttct ttagcaggag taaattcttc tttttccatg aaaattggaa
     7921 attgaatatg attagaatat ttttctataa tgctttcgat tttataagca ttagcaaact
     7981 catcatcttt taagtataaa gtaatgcttg ttccttgttc ttctttgtta gcgtcatcaa
     8041 tctcataacc atttgcatca gaactccaaa gataagcttt atcatctaaa gcttttttgc
     8101 ttaaaacttc gattttacta gccaccataa aagcagaata aaaacctact ccaaattgtc
     8161 ctatgagttg agaatctttt ttagcatcac cactcaaatt ttctaaaaag cttttagtgc
     8221 cgctttttgc tatggttcca aggttgttga taagatcatc tttatccata cctataccat
     8281 tatcactaat acttaaagtt tttttatctt tatcaatttt gatttcaatt ttaggttcga
     8341 attttaagct tttatattta tcatcactta cgctcaaaaa attaagctta tctaaagcat
     8401 cgcttgcgtt tgaaataagc tctcttaaaa aaatttcttt attagaatat aaagaatgta
     8461 tcataagctg taaaagctga ttgacttcgg tttgaaattg cattttaatt tcctttgtaa
     8521 ttttttaaag tggtatttta gcaaaaaata caaattctaa agtaaattta aagatttatt
     8581 tgaaaattat aaaaccaagc catgcggcaa ataagcaaag aaagacattt aagataatat
     8641 ttaacgtaaa attaaaataa tttccacttt gcaaaagaag taaattttga taagaaaaag
     8701 tagaaaaagt tgtaaaagct cctaaaaaac ctgtacttat aaagctttta agtaaaggag
     8761 ataaaccttt attttgtgca taagaaaaca aaagtcctat gataaaagaa cccaaaacat
     8821 taacaaaaag agttccaagg ctgatagaat aaggaaaaaa tttattcact aaatttatag
     8881 aaagcattct taagattgct cctataaatc ccccaaaacc aacaactaaa agggtattta
     8941 gcaaagctta gctctttctt gatcgagcaa ttcttgcatt ttttttctag tgttttcaag
     9001 ccatttgtca tcatttgtat cgactaaatc catacaaatg attttaagca ctccgctgct
     9061 tgcgctaaaa ctttttgtgt ctaaaatttt tgcagaatcc acaattaaaa tgggttgaac
     9121 tttaagattt aatttttcac ttaaaatttt tgctccactt tgaaatttaa gcattttttc
     9181 atttttagat ctagttcctt ctggaaaaat agccaaaacc ctatcttcac taattctttc
     9241 ttttgcttct tttaaaactc gtactaaatc acgcggattt tttctatcta tacaaagaag
     9301 ttttggtttt ttcatagcga ctttgaaaat aggaatttct cctaattctt ttttggcaat
     9361 ccagcataaa ttttttggat ataattcttc taaagcgatg atatctaaag cactttgatg
     9421 attcattaaa atcatctgag cttgtggatt aaaagtacca atgatttctt gtttataaga
     9481 gatggtatat ctttgaaatt tagcccaaat ttttcggatt ttccaaagtg tgttttgaga
     9541 ttttgtaaag caaaaacaaa aaaccaccaa agcaacgctt aaaacaaaaa aaatccaaaa
     9601 ataaagagct ttaatttttt tgtaaatcat ctttattaac ccaacctatt tttccatcag
     9661 aaaacagtac tttaatataa ttttgtcttt tgcctaaaac ttctactttt tcatctgcat
     9721 ttgccgtata aaaataagtt gaaggctctg taggtaaaat tttagcccta gaaccagcct
     9781 tgataattgc attttgagta ttggtatcta caagaaaact aagtgcaaaa caaacaactg
     9841 ccaaagccag aataatgtaa ttttttctcc atacaaataa agctccaaat aaaaccgcta
     9901 aaaaccataa ggtatattgt ttataaatat ttaagtcttt atttacagga tttaaatcac
     9961 tctgagtgct gatctcatcg tcactaattt ttagttttaa atttatattt tcaagctttt
    10021 tactgtcctt attgaaatac gaaaattcaa aatttgtttt acttaatggc aaaatagcat
    10081 aataaaaagc actagaagca ttaaaatccc cttttaaatt ttcaatacct tgcttttgaa
    10141 ttccttctat aaaaaagctt ttaagatttg tattggttgc gtttagttct accatcataa
    10201 tgatattagc atcatcaaaa taactcgctt taactttttt aatttccaaa aaacttgcca
    10261 caaggtgtga aaaatcttta ttggataaag tattttcaaa tttgatagga ttaagattga
    10321 tatcggcctc ttgaaaagct tcattatttc taagaagttt gatagaaatt ttactcaaac
    10381 tagcatttga atttttggct tcaaaccata aagttgtttt atattcgtta ttgataaatt
    10441 cccattttgc atctggattt aaaaaagata aattagtttt ttctacgctt atgttaaaat
    10501 caaattttgt attttccgta gtgcgagcat agatcgtaat aggaaaaact tctccaacat
    10561 ataccctact tggatattca tcatttgtaa gaaccaaact ccctttggct acaaaaggat
    10621 cgtctacatt gctttcaaag tcattgtttt catcacttgg cggaatattt tgataaattt
    10681 tttgttcttc ttggggtaat ttttgtaatt ctttttgcat attttcatct tggccactaa
    10741 atacagaaat ttcacccctg ccaaacaata caacaacact aaaaattaaa gttaataaaa
    10801 ttttcaaaat aaaaagcctt taagcatttt caaacctata tcattaccta ggactttttc
    10861 acaagcacgc tcaggatgtg gcatgagtcc aaagattttt ttgttttcat cacaaattcc
    10921 tgcgatatca aatacagaac catttggatt tggctcgtat tttaaagtaa taagatcttt
    10981 atcttgcaat tcttttaaag tagcctcatc agcgtaataa tttccctctc catgagcaat
    11041 tggtaaatta ataatttcat cttttttgaa atttttcaaa aaggcattat cattagaaac
    11101 tactcttaaa ttttggtttt ttgagataaa actaagattg ttgttatgct tcattgcacc
    11161 ttttaaaaga ccgctttcaa gtaaaatttg aaaaccattg caaataccta agatatatcc
    11221 tccctttttt gcatgattaa aaacaccttg catagcagga gcaagttttg caatagctgc
    11281 acatcttaga taatctccat aagaaaatcc gcctggcaaa acaactaaat ctgtatcaaa
    11341 ttctttttct tcatgccaaa caatctgcgt ttttactcca agtttttcaa aggcataagc
    11401 tgtatcaaat tcacaatttg tccctggaaa tctaataata gcaactttca ttttactctt
    11461 tctcaattac aagctcataa tcttcaatga cgctatttac caacaactct tcacacattt
    11521 tttttacttg ttctttggct aatttttcat ctttctcatc aagagaaatt ttgatttgtt
    11581 ttgctatttt tacttcttta acactattaa aatttaaaga atgcaaagct ttttccaccg
    11641 ctttgccttg tggatctaaa accccatttt ttaaagaaat atttacaata acttccatat
    11701 ttttccttaa tttaatattc tttttaaaac ttcttcataa gccattttta cattgcctag
    11761 atcttgacga aatctatctt tatctaattt ttcattacta aatttatccc aaaatctaca
    11821 actatcaggg cttatttcat cagctaaaac aagctcatta tctttagtta aacccagttc
    11881 gattttaaag tcaatcagcc ttaaattttt attatcaaaa aatggagtta aaatagagtt
    11941 aatctttcta gccatatttt taatttcact aatttgagct tcattttgca ctaaatttaa
    12001 aatcaaacaa tgctcatcat tgataaaagg atcgcctaag gcatcatctt taagacaaaa
    12061 ttccaccaaa gcaaaaggta gcacagtacc atctttaata cccagtcttt ttgtaagaga
    12121 acctgttgca acattgcgta ctataacttc aataggaaca attttacatt ttttaaccac
    12181 ttgttctgta tcgcttatag tttctaccaa atgggtttta atcccatttt tttcgagcaa
    12241 atgaaaaatt tcagtactga ttttacagtt taatgcgcct tttccacttt cattgcctct
    12301 tttttctgca ttaaaagcag ttaaatcatc tttaaactca ctaattagta aattttcatc
    12361 atcagttttg aaaagttttt taccttttcc ttcataaagc atttcttttt ttgtcatttt
    12421 attgtccttg tttgatattt aaaattttaa tagtatcaat agctgatttt aactgtgcgt
    12481 catcattgat ttgtttttga ctgattagat ttttattgtc tttattttct tgtttatctt
    12541 cttttttatt tttatctatt ttttcaagct cactttctaa atgttgtttt aagtcgcttt
    12601 cttttataga aaaaccatct tcttgagtat ttactttacc tggaaaaact tcaatatcag
    12661 gttttacacc cactgcttga atagtacgcc cgcttggaag ataatatctt gcaatagtaa
    12721 gccttaaagc ttcagtttta ttaataggta tgatttgctg aacactacct tttccaaaag
    12781 tattttcacc cacaataaca ccgcgtttaa gatcttgtaa agctccactt acaatttcac
    12841 ttgcactagc acttccacca tttacaagca caaccaaaga agcattagaa attttgtttt
    12901 taggatcggc tttatattct tgattttcac ttgcgatgcg tcctttttga gaaacaataa
    12961 cacctttatc tacaaataaa tttacaagtc ctatggcttg atttaaaagt ccaccaggat
    13021 tatttctaag atctaaaata actcctttaa cattaggata ttttttaagt tctttacttg
    13081 ccacatctac aacattttta tcaaaatttg taaccctaag ataaagaatg ttttcatttt
    13141 ctatcatttt tgcataaaca ctttctatct taataatttc tcttgtaagt gtaacatcaa
    13201 aaggttttgt tgcacctttt ctaaaaatgg ttaaagtgat ttgagttttt ggcttaccac
    13261 gcattttatc tacagcatca ttgagattaa ttcctaaagt ggcctcatca ttaattttta
    13321 aaataatatc tcctgatttt atccctgcct tatctgctgg tgttccttct ataggagaaa
    13381 caactgttaa agcgccatct ttcataccta cggttatacc aaggccgcca aattcgccat
    13441 tggtttgaat tttcatatca ttaaaatctt tttcatttaa aaaagaagaa tgcgcatcaa
    13501 gattgcttaa aagtcctgat aaagatttat ccaccaaatc gctgatattt tgatcatcca
    13561 catagtattg ctctactata gcaagagttt ttgtaagctt atctaaagct tctaggcgtt
    13621 tttgaacctg ctcttctttt tgatcaactt tagcttgtaa atgacttgtt aaaaatagac
    13681 ataaaataaa agtagtggca aagcctgcaa gacccgcaaa aaatcgtttt gttttcaaaa
    13741 taagctccat cattgagttt tagtttaaag agtaaatttt aataaaaatt gcttaaaact
    13801 tcgtaaataa atttaaattc ttaaaaatat gttaaaatag actaaaaatt ccaaaaagaa
    13861 agttaataca atgtgccaag aaaaacatac tcatacacat tctcaaaaac atcttaaagc
    13921 agtttgcaat cgtctaagta gaaccatagg gcatttaagc gctattaaaa gaatggttga
    13981 aaatgacaaa gactgtagtg aaattttaat ccagcttgct gctgtaaaag ccgaagttaa
    14041 caatactgca aaagtagttt taaaagaaca tttagctcat tgtatggtac atgctgtaga
    14101 agaaaatgat attcaaagta tagaagaatt aaacaaggct atagatatgt ttatgaaata
    14161 atctaaaatt agttatttgt cctattattt aaaaaatttt actcaattaa cttgacatta
    14221 tatgactaaa gttatataat agcaagtata taaactaaat aaaggataaa acatggcaaa
    14281 tatacaagat tttttaactg ataatatgct ttcaaacctt gaaagtgcag catctttagc
    14341 tatacattct aaaaataatg aagttgtacc tttacatctt ttacgggctt taagcgtaga
    14401 tagtacaagt attttaaatc aaattttaaa taaattaaat atttctaaag aagccttaga
    14461 acttgaaatt aaaagcagaa tttcaaaact tgcaacgagt tcaaatgtaa accgtgaaaa
    14521 tatacgcttt tccaatgaac ttataaattc attagaaaat gctaaaggat taatgagtgc
    14581 taatggagat agttatttaa gtgtggatac ttggcttata agtgaaagtc aaaaaagtcc
    14641 tattaaagaa attttggctc aatttttaga tttaagagaa tttcaaaaag agcttgaaag
    14701 tctaagagcg ggacgcaaaa tcgatagcaa aacaagcgat gaaaccttag acagcttaaa
    14761 taaatttggt atagatttaa ccttaaaagc aagcgagggt aaacttgatc ctgttatagg
    14821 cagagaagaa gaaatcgagc gtttgatgca aattttaata cgcaaaacca aaaataaccc
    14881 tatactttta ggtgaaccag gcgtaggaaa aacagctata gtagaagctt tagcacaaag
    14941 aattattaaa aaagatgttc caaaatcttt gcaaaataaa aaagttatcg ctcttgatat
    15001 gagtgcttta attgcaggtg caaaatacag aggagaattc gaagatagat taaaagctgt
    15061 ggttaatgaa gtgataaaaa gtgaaaacat cattcttttt atcgatgaaa ttcacactat
    15121 agtaggagct ggagcgagtg aaggcagtat ggatgcggca aatattttaa aacccgctct
    15181 tgcaagaggt gaactccata ctataggcgc aactacttta aaagaatatc gtaaatattt
    15241 tgaaaaagat gcagccttgc aacgccgttt tcaacctgta aatgtaggtg agccaagtgt
    15301 taatgaggct ttggctatgt taaggggtat aaaagaaaag cttgaaattc atcataatgt
    15361 aactataaat gatagcgctt tagtagctgc agctaaactt tcaaagcgtt atatagcgga
    15421 tcgtttttta cctgataagg ccattgattt aatcgatgaa gctgcagctg aactgaaaat
    15481 gcaaattgaa agcgaaccaa gttctttaag aaaagtacgc aaagatatag aaactttaga
    15541 agttgaaaat gaagctttaa aaatggaaaa tgacgagaaa aatcaaaaaa gacttgatga
    15601 aatcgcaaaa gaactagcca atttaaaaga aaaacaaaat gccttaaatt cacagtttga
    15661 aaatgaaaaa agtgtttttg atggcataag tgctaagaaa aaagaaattg atctgcttaa
    15721 aaatgaagct tctttggcta aagctagagg tgaatttcaa aaagcagccg agctagagta
    15781 tggaaaaatt ccaagtcttg aaaaagaagt agaaatttta gaagataaat ggaaaaaaat
    15841 gagtgaaaat ggagttttac ttaaaaatca agtggatgag gatttggttg ctggaatttt
    15901 aagcaaatgg acgggtatta gcgtgcaaaa aatgttaact tctgaaaaac aaaaattctt
    15961 agaagtggaa aaacatttaa aagaaagtgt cataggacaa gataaggcct taagtgcttt
    16021 agctagagcc attaaacgca ataaagcagg acttaatgcg gacaataaac ctataggaag
    16081 ctttttattt ttagggccaa caggggtagg aaaaacacaa tcagctaaag ctttggcaaa
    16141 atttttattt gacgatgaaa aagcaatgat tcgctttgat atgagtgaat ttatggaaaa
    16201 acatagtgtt tcaagactct taggcgcacc tccagggtac ataggacatg aagaaggtgg
    16261 agagcttgct gaagctgtgc gaagaaaacc ttatagcgtg cttttgtttg atgaagttga
    16321 aaaagcacat aaagatgtat ttaatgtgct tttagggatt ttagatgatg gtagagcaac
    16381 cgatagcaaa ggtgtaacag tggattttaa aaataccatt atcattttaa cttctaatat
    16441 tgcctcaagc gctattatga atttaagcgg aaaagaacaa gaagatgcgg taaaaaatga
    16501 gttaaaaaat ttctttaaac ctgagttttt aaaccgctta gatgatatta tcacctttaa
    16561 tccacttgga aaagatgaag cttatgaaat agtcaagctt ttatttaaag atttacaaat
    16621 gagcttagaa aacaagggaa taaaagcaag tttaagcgaa aatgcagccc ttttaatcgc
    16681 taaagatggt tttgaccctg attttggtgc tagaccttta agaagagcta tttatgatct
    16741 tatagaagat aaattaagcg atatgatact tgctgatgaa cttcatgaaa atgatagcat
    16801 tatcattgat gcaaaagatg atgaaataat catcaaaaaa gcttaatcat tttgaaagta
    16861 gatctttcta ctttcaaaat ataatctcgc tttcattaaa tttcatattt gcttttggta
    16921 atggtgattt ggtggtataa taagcacttt ctcctttata atttccacga taaaccccat
    16981 taggaatgct aaattttcta gttgtatcag ggaatttttc tatatattga gttaaaaatt
    17041 ctctaaacac aggagcagct gttctagccc caccttctgt ataacgcata ggcttgttgt
    17101 tatcatttcc ataccaaatg attgcttcta tttcaggcgt aagtccacaa aaccaagcat
    17161 caacactttt attcgttgtt cctgtttttc ctgctatttc tatatctttt actcttgcat
    17221 tgcgtcctgt gcctttttca acaacatttc tcatcatatc taaaaccaga aaactttgcg
    17281 cttcatcgct gactttacgc tcatttgagt taaattccat gatggtttta ccggttttat
    17341 cctgaacttg tctgataatt tgaggatctt taatcgtacc atagttccca aacatggtat
    17401 aaaatttcga atactccaaa ggagaaatac caaaacttcc caatacgatt gataaattag
    17461 gcggtatatc tttaaatcca aattccatta gtttagagta aagaacatca agccccatat
    17521 caagtgcgag attaatggta gctaaatttc ttgatcttgt taaagcttct tttaaggtaa
    17581 ttaaacctaa aaatttaccc ccttcatttt taggtttcca atcctcatta ttacccgctc
    17641 caccttcaaa aattctagaa atatcagcaa tttcactcat aggcgaatat cctaaattaa
    17701 tcgccacttg atacacaaaa ggtttaaaag agcttccagg ttgacgcata ctttgagtag
    17761 cacggttata attacttttt tcataatcaa ccccacctac caaagctaaa acatcgccac
    17821 tttgatgatt taccacgacc atagctccgt ttaaagtgct taaatttgca tctttatcgc
    17881 gttttactat ctcatcataa ccaaatttca aagcattctg cgccatattt tgaacatcta
    17941 agtctatatt taaaatgatt ttatatccac ctgtttttaa gtctttgata ttagggctta
    18001 attgtttaat cacttcatct acgacataag gagcagcatt ttgagtaagc gtatcatcat
    18061 aaacttgcgg aatttcttta atggctgtat cataatctgc ttttgaaatc caacctagat
    18121 tatacattct tgaaataaca ttatttgctc ttgagatgga aagatctaaa tgctttgtag
    18181 gatcataact gctaggtgct tttggcatac ctactaacat agcaatctct ttaaggctta
    18241 attcatttaa atttttatga aaatacccca aagatgcggt ttttactcca taatacccat
    18301 gtccaaaaaa gataaaattt aaataccttt ctaaaatttg ctctttagtt aaaatggttt
    18361 ccattttata agcaagcaaa gcttcgcgaa ttttacgcgt aatcgttctt tctggggtta
    18421 attctgtgtt tttaataaat tgctgggtaa gagtggaagc tccttccatg gtttttccac
    18481 cgctttttat gatttttaca gcagctctaa aaatggcatc gatattaact ccattatgtt
    18541 caaaaaagct tgtatcttct atagcaacta aagcttctat aaggcgtgga ggaagctctt
    18601 cataaggagc gtaaaaacga tgctgttcaa aaatattagc cacaagcttg ccatttctat
    18661 cgtaaatttg tgttgtaaga ggaggtttgt attctttaaa agtataaccc tcagtatcag
    18721 cacttgtgaa aagataagcc acataaataa atccagctat aaacaaaaga gtaaaaaatg
    18781 aaaaaatata ttttaatatt ttcataaata agcctttaaa gtttggatat caagccctaa
    18841 agcagtgctt agatttccta cttggtgggt gatgaaattt tgatgaaaac cctcacacat
    18901 aatacaaccc gccttgcctt tataaagatc attttctaca taatctctta aagcattttc
    18961 atcaaaattt ttaaaataaa gcgtagtttt tgaaagagaa aaaactcttt tttcaggttt
    19021 tacaagcaaa aaagccgata aaatacttgc atacttgcca ttttgcaagg caagcatttc
    19081 ataagcttct tttttatcct ttgctttggt aagaattttt tcatctatac aaactatact
    19141 atctgcaaaa agcaaatttt ggttttgaaa atctttgcct aaagtactta aaaattgtct
    19201 ttctttttca agaactattt tttgaacata taaaaaaggt gaaatattct tatctaaatt
    19261 ttcatcataa tcaaaactaa cttgcctaaa atcaatcttt gcggttttaa gcaagttagc
    19321 tcttgaaatg gaacttgaag caagaattaa cattaaagtg ctttttctat cgtttctaag
    19381 ctttgtttta aagcttcatt gattttgctt aaatcttttc cacctgcagt agcaaaatca
    19441 tctcttccgc caccatttcc acctaaaatt tgtgccgctt ctttaaccaa agctcctgct
    19501 tttaaaggca catctttaac accagctgct aaagtgattt tttcatcttt tacttggata
    19561 agtaaaatca ccgctttagc aaatttgttt ttaaaatcat caatcatagc tttaatatcg
    19621 ccattatcta tacgttttac gcaaatttca acaccttgga tatttttaga atcaagctcg
    19681 gttttacttg aatttttaag ctcatttttt aaacttaaaa tttcattttt aagcttttta
    19741 atcccgctta aaatatcatt atttttaagt tcatctttta ctttagaaag ttcttcaagt
    19801 tgatttttta caaattctaa agccgcttta gaaaccacag cttcaatgcg tctaactcca
    19861 gcactcacac cgctttcttt aactatgtaa aaacttccta tttgagcagt atttttaaca
    19921 tgagttcccc cgcaaagttc cttgctttca cctagagtta aaacacgcac attgccttgg
    19981 tatttttcat taaacaatgc tatagcgccg ctttttttag cttcttctaa aggcatattt
    20041 tctaagatag cttcgcttga gtttataatc atttcattga ctcttttttc aatgttttct
    20101 agctcttctt tgcttaaagc tttatgatga gtaaaatcaa atcttagttt attgctttca
    20161 accaaagatc ctgcttgact tacatgagaa cctaaaattt ctcttaaagc atggtgtaaa
    20221 agatgagtgg ctgagtggtg gcgtgcgatt tgctctcttt tttctgtatc gattcttgca
    20281 tgaactatat cgccaacttt tagttcttcg cctgctttta caaagctaag attgagatta
    20341 aaaaactttt gcgtatctaa aacttcacgc ttggccataa atccactatc agcactttgc
    20401 cccccacttg ttgcataaaa aggtgtgttt ttaagcatca cccaacccgc atctttaagg
    20461 gtggaaactt ctttaaaatc ttcatctaaa agggctaaaa ttttactttc gcattctgct
    20521 ttttcataac ctacgaaatg attttctcca aatttttcaa gcaagttttt aaaatctccg
    20581 cttgcagttt tatctccact tcctttccaa gaagccttag cgcgtgcttt ttgctcattc
    20641 attaaaagtt caaatttttc ttcatcaact ttaagatttt tttctcttag catatcagcc
    20701 gttaaatcaa gcggaaaacc ataagtatca taaagtttaa aggctacttc tccgctaaaa
    20761 atttctttag tgtttttaag ctcttcatta aaaatttcaa tcccattttc tatagtgctt
    20821 aaaaatcttt cttcttcaag gcgaatttgt tcttttataa agtctttttt ctcattaaga
    20881 taggtataat gtccgcccat taaatcgcat acaacatcaa ctagtttata cataaaagct
    20941 tgtttaaaac ctaacaaata tccatgtctt aaagcacgac gcaaaatacg acgcaaaaca
    21001 taacctctac cttctttatc aaaacttacc ccttgtgcaa gcaaaaatac acttgatctt
    21061 atatgatcag ctatgactct aaaacttgct ccgctttcat aaatataagt tttattacaa
    21121 agttttgaaa tttcattgat gattggcata aaaagcgagc tatcaaaatt gctgaattta
    21181 ccttctttaa tcgctgttac tctttcaagt cccattcccg tatcaatgct tggctttggt
    21241 agtgggctaa gcactccatc agcacttctt tcatattgca taaaaacaag attccagatt
    21301 tctaaaaatc tatctccatc tccgcccata taatcttcgc ttgagttaaa atgctcttct
    21361 ccttggtcat aaaaaatctc actacaagga ccacaaggac cagtatcgcc catttgccag
    21421 aagttatctt tatcgccgaa tttgtaaatt ctttcttttt gaatgtgttt ttgccataga
    21481 ttaaaagctt catcatcgtt ttcatgcacg gttacataaa gtctgtcttt aggtagtttt
    21541 aaaaattcag ttacaaattc ccaagcataa gctatggctt gttctttaaa ataatctcca
    21601 aaactaaaat tcccaagcat ttcaaaaaaa gtatgatggc gtgcggtata tcctacatta
    21661 tctaagtcat tgtgctttcc gcccgctctt atacaagttt gacagcttgt tttgcgtgga
    21721 gggtttgggc gtggaatttc tcctgtaaat atacttttaa aaggcaccat acccgcatta
    21781 gtaaaaagta aagttgcatc atcaggaact aaaggacttg acggggttat ctcatgtcct
    21841 tttgatgcaa aaaaatccaa ataagctttt ctaatatcca tgaattttcc taaagaaatt
    21901 tttataaaaa catatcatac caaaattact ttaaattaag taaaactaaa atacaataaa
    21961 catttttatt taattttatt tctctaaggt tttttatgaa ttttatcaat cttcaagccc
    22021 aatatctcgc atacaaagat gaaatcaatg ctgaaattga aagcgtttta tcaagctctt
    22081 cttttatagg cggtgcaaag cttaacgaat ttgagcaaaa tttagctcat tttttaggtg
    22141 ttaaacacgc tataggttgt tcaagtggaa ccagtgcttt atatcttgcc ttaagagcct
    22201 tagatattgg caaagatgat gaagttatag tgcctagttt tactttcata gcaacagctg
    22261 aagttgtggc cttagtaggc gcaaaacctg tttttgtaga tataaattta tcaaattaca
    22321 atcttgattt tgaagcagtg caaaaagcaa taaccccaaa aactaaagct gttatagcag
    22381 taagtatgtt tggacaaatg agtgatttaa gggctttaga agaaatttta aaagataaaa
    22441 atatcacttt gatcgaagat ggtgcacaaa gttttggtgc aagtttcaaa ggagaaaaat
    22501 cctgctccat agctaaaatt tcatgcacga gcttttttcc ttcaaaacct ttgggagctt
    22561 atggcgatgg tggggctatt ttttgccatg atgatgaaat tgctaaaaaa ataagaattt
    22621 tactcaatca cggacaaact cagcgttata aacatgaatt tataggtata aatggacgcc
    22681 ttgatacctt gcaagcggcg attttaaatg ttaagttaaa atacctagaa aaagaattag
    22741 acaaaagaca aaaattagca caaacttata atgcaaattt aaaaaactgc caaattccgc
    22801 aaattgatcc aaatgctttt agcgcttatg cacaatacag cgttttagtt gaagatagag
    22861 ctagtgtatt gcaaaaattt gaaaaagcta atatacctta tgctatacac tatccaaccc
    22921 ctttgcataa acaaccttgc tttagtgagt tttcaaattt agaacttaaa aattcagaat
    22981 acgcaagcga acacatctta tctttgcctt tttcaccttt tttaagtgaa gaagagcaag
    23041 agcaagttat ttgtattttt aaagattaat tccatgaaaa taggtatcat aggccttgga
    23101 aaaatggggc aaaaccactt aaatgaactt agtaaaaatt ctcattttaa gcttaatgca
    23161 ctttttgatc tttgcaaaaa tccaaatcta aatatttttg atgatatttt ttatgatgat
    23221 ttggataaat ttttaaatca aaataatgat attatcatca tagcaacacc tacaaattca
    23281 catttagcaa tagcaaaaaa agtttttaaa caatgcaaat gcgttttaat cgaaaagcct
    23341 ttagctctaa atttaaaaga aatagacgaa atttcaaatt tagctaaaga atacagcgta
    23401 aaagtaggcg taggtttttg tgaaagattt aatcctgcgg ttttagccct aaaaaaagag
    23461 cttgaaaatg aagaaattat cagcattaac atacaaagat tttcacccta cccgcaaaga
    23521 atcagcgatg tagggatttt gcaagatttg gctgtgcatg atcttgattt gctttgtttt
    23581 ttaagcaaac aagaaataac aaaaaccaat ttgcttaaaa aatataccca agatcaaaca
    23641 agagaaagtg aaagcattat tctatgtgag cttgaaaaat gtattgctag catacatcaa
    23701 agttggaata gcacacaaaa actaagaaaa attcatctta ttactaaaaa tcatttttat
    23761 gaagccaatt taaatgactt ttctttatta aaagatggaa attttataga acttactcaa
    23821 caaagtccac ttttttcaga acacgaagct ttgttaaaac ttatcgataa tcaagctaat
    23881 catttagcca gcacgagcga tgcttacaaa gttcaagaaa ttttagaaag gtttgcgtga
    23941 aattagtttt atttttaaat atgggcggag ctacgaattt acaagattgt gaagtttttt
    24001 taaaaaatat gtttaatgat ccttatattt taggaatcaa aaatcgattt ttaagaaaat
    24061 ttgtagcatg gatcataaca aaggctcgcg ttaaagccat gcaagaaaac tataaaaaaa
    24121 tgggtggaaa atccccttta aacgaactta ctcaaagcct gtgtaataaa cttaatttaa
    24181 aacaagatga atttaaattt gattttgtaa atctttatgt gcctcctttt gccacagaaa
    24241 ttttgcaaaa atacacttta aatgaaagtg atgaaatcat tctttttcca ctttatccgc
    24301 accattcttg caccacagta acttcatctt tagaagttct gcaaaatgaa atttcaaagc
    24361 aaaaaattca agcaaaagta aaaactatag atatttttta caaaaatgag ctttataatg
    24421 agatgatagt ttcgcacatt ttggctaaaa aaagtaaatt tgatgccaaa attttgattt
    24481 tctcagcgca ttctttacca caaagcatta ttgacaaagg tgatttatat gaaaagcatg
    24541 taaatgatca tgtagaaatt ttaaaagaaa aactaaaaga tcattttgat gaatttattt
    24601 tagcttatca gtctaaacta ggccctgtaa aatggcttga accaaataca agcgatgttt
    24661 tagcaaattt aaacgataaa gctttgattt accctatttc tttttgcatt gattgttctg
    24721 aaacgatttt tgaactaggt atggagtata aacatttagc aaaatgtgat tatgatttga
    24781 taagttgccc taatgatagt gatgaattta tggaatttat tttaaattct ataaat
//
LOCUS       DARBAC010000009        24297 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.009, whole genome shotgun sequence.
ACCESSION   DARBAC010000009 DARBAC010000000
VERSION     DARBAC010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24297
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.009"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..154
                     /locus_tag="SB799_000262"
     CDS             <1..154
                     /locus_tag="SB799_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEG0867531.1"
                     /translation="NFLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLECVK
                     LAKTLV"
     gene            complement(151..603)
                     /locus_tag="SB799_000263"
     CDS             complement(151..603)
                     /locus_tag="SB799_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867532.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDNIYFNYAKALIKIKYFYPIAQCVNFKFSNFN
                     PDANLNKDGVIIVHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(600..1262)
                     /locus_tag="SB799_000264"
     CDS             complement(600..1262)
                     /locus_tag="SB799_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867533.1"
                     /translation="MSKAFTLFELIISLILFTFITSLLSKSLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISTNFTGSFIPLQAQ
                     LVIKLQNEELIYEMKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQTKYCLEKRI
                     LL"
     gene            complement(1259..1561)
                     /locus_tag="SB799_000265"
     CDS             complement(1259..1561)
                     /locus_tag="SB799_000265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867534.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDGIFQFQKLYFQDQNYSVYFKE"
     gene            complement(1558..2289)
                     /locus_tag="SB799_000266"
     CDS             complement(1558..2289)
                     /locus_tag="SB799_000266"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEG0867535.1"
                     /translation="MLYILANGAMATALAYGLKDDYEICIVGRSIEKLQALTKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVR
                     IMPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(2289..2678)
                     /gene="fliW"
                     /locus_tag="SB799_000267"
     CDS             complement(2289..2678)
                     /gene="fliW"
                     /locus_tag="SB799_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HEG0867536.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLNGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
     gene            2839..3486
                     /locus_tag="SB799_000268"
     CDS             2839..3486
                     /locus_tag="SB799_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEG0867537.1"
                     /translation="MKKGIFLLVFLSVFFNACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            3503..5878
                     /gene="lon"
                     /locus_tag="SB799_000269"
     CDS             3503..5878
                     /gene="lon"
                     /locus_tag="SB799_000269"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEG0867538.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
     gene            complement(5939..6199)
                     /gene="rpsR"
                     /locus_tag="SB799_000270"
     CDS             complement(5939..6199)
                     /gene="rpsR"
                     /locus_tag="SB799_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEG0867539.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(6210..6761)
                     /locus_tag="SB799_000271"
     CDS             complement(6210..6761)
                     /locus_tag="SB799_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEG0867540.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTTNGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGNSNAPQQGGNFGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKTNPAPQRNQNP
                     QHEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(6770..7147)
                     /locus_tag="SB799_000272"
     CDS             complement(6770..7147)
                     /locus_tag="SB799_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEG0867541.1"
                     /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            complement(7234..8099)
                     /locus_tag="SB799_000273"
                     /pseudo
     CDS             complement(7234..8099)
                     /locus_tag="SB799_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
     gene            complement(8092..9198)
                     /gene="rseP"
                     /locus_tag="SB799_000274"
     CDS             complement(8092..9198)
                     /gene="rseP"
                     /locus_tag="SB799_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEG0867542.1"
                     /translation="MRSLLLLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTSYRLSALPLGGYVKLKGQDDMRPSFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIAPNSAAQEIGLQ
                     KNDTILEINGVKIQSFDEISKHLSLEPLKILINREGKNLEFILTPKIGQGYNDFGQII
                     EKPQLGVSPNGTSTLVKHQGLESFKYAVQESFQASTLIIKGIIKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRAFEYLSYTGMAILLSLMLFATYNDISRIIGE"
     gene            complement(9195..9731)
                     /gene="pgsA"
                     /locus_tag="SB799_000275"
     CDS             complement(9195..9731)
                     /gene="pgsA"
                     /locus_tag="SB799_000275"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEG0867543.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIYKFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(9856..10461)
                     /locus_tag="SB799_000276"
     CDS             complement(9856..10461)
                     /locus_tag="SB799_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0867544.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLNKEDLNSILEIARLSPSSLGLE
                     PWKFIVVQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     IQKRLDTYMPFLKSLNQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLDIQKERSSLVVALGYCNDEKNPQKNRFSFDEVVKFI"
     gene            complement(10461..11081)
                     /locus_tag="SB799_000277"
     CDS             complement(10461..11081)
                     /locus_tag="SB799_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0867545.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILKIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     RVDNFLHLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
     gene            complement(11146..11571)
                     /locus_tag="SB799_000278"
     CDS             complement(11146..11571)
                     /locus_tag="SB799_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0867546.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(11583..12671)
                     /locus_tag="SB799_000279"
     CDS             complement(11583..12671)
                     /locus_tag="SB799_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEG0867547.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQNKTDK
                     DLPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     SIKSTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIISYSNRIKHEWLGISESVLENNGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            12770..15523
                     /gene="ileS"
                     /locus_tag="SB799_000280"
     CDS             12770..15523
                     /gene="ileS"
                     /locus_tag="SB799_000280"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEG0867548.1"
                     /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYEKMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRAKELLPSHLLEEFIGLHIFKANEKILELLGEKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYKAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTVINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLEV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            15517..15627
                     /locus_tag="SB799_000281"
     CDS             15517..15627
                     /locus_tag="SB799_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867549.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            15624..16985
                     /gene="gatA"
                     /locus_tag="SB799_000282"
     CDS             15624..16985
                     /gene="gatA"
                     /locus_tag="SB799_000282"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEG0867550.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            16995..18452
                     /gene="guaB"
                     /locus_tag="SB799_000283"
     CDS             16995..18452
                     /gene="guaB"
                     /locus_tag="SB799_000283"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEG0867551.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVNALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            18449..18622
                     /gene="xseB"
                     /locus_tag="SB799_000284"
     CDS             18449..18622
                     /gene="xseB"
                     /locus_tag="SB799_000284"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEG0867552.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            18615..19397
                     /locus_tag="SB799_000285"
     CDS             18615..19397
                     /locus_tag="SB799_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEG0867553.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGANLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTSSELKIFTFNYEKLKCALLFGFEAHFDIFWQQIM
                     TKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFEKIIKEFKN"
     gene            19518..20816
                     /locus_tag="SB799_000286"
     CDS             19518..20816
                     /locus_tag="SB799_000286"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEG0867554.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITKELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHHAYTQFLDVAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELVILPVYAAGEEPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            20809..21159
                     /locus_tag="SB799_000287"
     CDS             20809..21159
                     /locus_tag="SB799_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867555.1"
                     /translation="MSRFFLYLLIILILALITFVLREKLGKKTKPFFGVLLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            21149..23359
                     /locus_tag="SB799_000288"
     CDS             21149..23359
                     /locus_tag="SB799_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEG0867556.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     DSWLQKIEFASGALELCLNFDEKGELKESLDERLVNLNTALRLKNESIIAEFKKFCYT
                     KALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLFAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYNEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKDQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLK
                     DTKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSGAMPKKVAKTSISISKPSNLSVTLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            23368..24297
                     /locus_tag="SB799_000289"
                     /pseudo
     CDS             23368..24297
                     /locus_tag="SB799_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction enzyme HsdR N-terminal
                     domain-containing protein"
BASE COUNT         8638 a         3212 c         4204 g         8243 t
ORIGIN      
        1 aaatttttta aaattttata gcttaaaaga agaagataag gttgtagtta taggacaaag
       61 cacagcaaag aagcttttaa attttaaaaa tctttatata tgcgaaaatc aaagtctttt
      121 agagtgtgtt aagcttgcta agactttggt ttaatttttt aaattccaaa aattttcttt
      181 gggataaatg ataatgcttt ttgtgagtaa aatttcatca ttgacatttt tatcacgatt
      241 taaagcaatg ctaatgtgga ctataataac accatctttg tttaaatttg catcgggatt
      301 gaagttggaa aatttaaaat taacacattg tgcaatagga taaaagtatt ttattttaat
      361 caaagctttt gcgtaattaa aatatatatt atctaaacat tctttatttt cttgctttgc
      421 ttgatataaa aaatatttag aaaattgtgt tgcattgtga cttaaaattt gagcttgaag
      481 gtagtaataa ctatcttgga ttatttttgg agtgtagcta gatatgttta aggtcaagct
      541 catccataga cttattagta gtattaaaaa aattgtccaa attaaaacat aagctttttt
      601 catagtaaaa ttcttttttc aaggcaatat tttgtttgtc tttttaggca aatttttaat
      661 ttattgtttt gcaggttaaa tgagcttatg tttttagaaa ttaatccttg ttggtttaat
      721 tgttcattaa attttggctt catttcatat ataagttctt cattttgcaa tttgataact
      781 aattgagctt gcaaaggaat aaaactacct gtaaaatttg tagatatacc attttctaag
      841 atggatattt tttcaatctt attaatttta taagcatagc taatatgctc attgtcatta
      901 tataaatctt ttctattttg gagttgtgtt ttaaaatcag aatgaggtga ataaagtgta
      961 tgattatttt ctaaaataag agcagaatta ataagataaa gtttattatc ttttaggcta
     1021 attaactcat cttttaaaag acattttaat gtattttgtg aaaatgtaat attaatacaa
     1081 ttttgtatta atttttctat tttaagcaag tttaaatgtg cttgagtgat aagattattt
     1141 gtatgcaaag cagtgaaatt taaatgataa aaatccatta aagattttga aagtaagcta
     1201 gttataaaag taaaaagtat tagtgatatt ataagttcaa aaagtgtaaa agctttgctc
     1261 attctttaaa ataaacacta taattttgat cttgaaagta taatttttga aattgaaata
     1321 taccatcatt aataaactgt tcttgtaaaa ctataggttt taaggctgaa gtttgaagta
     1381 tgatggtttt aaaaatgggc ttttcatata attcttcttg aagtttatag agtctttcaa
     1441 aaatatttaa attttcatag tttttgtaaa gttgagtata gtgataaaaa atgccaatga
     1501 aaattaaaga tatgatcgtt atagcactaa tactttctat aagtatgaaa gcctttttca
     1561 tttagcgctg ctagcattta tggcttcaaa aaaacttccg cgaattcctt tttgttcgag
     1621 tatttttatg ccttttattg taactccgcc aggggagcaa atattttctt tgatgatagc
     1681 tggatgttca tgttctagta aagcactaga gcttttaaat aaagagcgcg taagattgag
     1741 actaagttct tttgacaaac cttcataaac tccagcatta gcaatacttt ctgctataag
     1801 tgctaaaaaa gcaggagcgc agccgctaat cgccatagct gcattcattt gtatttcatt
     1861 atctaattta taagccgagc caaaagtttt taaaatgtct aaaatttcat tttcaaaatg
     1921 agagttttta agtatatatg gtgtagttga agccttatat ttagctgctg tattaggcat
     1981 tattctaaca taattttgag ctttgatggt ttgtagtttt tcaaaatcaa cattagctaa
     2041 aacagagatt aagatgcgtg cttgtccttt tagcatttgg gcaatatttt ctaaagcata
     2101 aggtttgaaa gccaaaataa catctttacc ttctatgtta aaatctttgt aaagtaaggt
     2161 tttaaagcct tctttggtga gggcttgaag tttttctata cttcttccta ctatacaaat
     2221 ttcataatca tcttttaatc cataggctaa ggctgttgcc atagctccat ttgcaagtat
     2281 atagagcatt attttttaat ataattagca atttgatcag cttgaaaaaa gtccggataa
     2341 ttaactgtat ctagtatcac ttgtaccata gtattattat caagattaat gactactgga
     2401 gctagaaaat tcactgtcga ttcttcaatg ctttttgcta tggctactat attaaaaatt
     2461 ttcatattag attcaggtgt taaagaaaga agctcttgat aataagttgg tatatcaaat
     2521 tcataatcag gtctaatcaa ataaggatta attaaaacaa aagaaaagtc tttaccatta
     2581 agacttttaa gtcttacaaa tacttcatcg atagttgaaa attccatatt tttggtttct
     2641 tcaaaaccta agatagggca tttaacagct agggtcatgt tttctcctca agttataatg
     2701 tttaatattt taacataaaa taagcaataa tcattccaaa attttaaatt atttaattaa
     2761 ttttattata attttagaag aacataatta taaaatcgtt aaaatataga tttttgagaa
     2821 tataaatcaa ggtgaagtat gaaaaaaggt atttttttat tggttttttt aagtgttttt
     2881 tttaatgcgt gtagtacaaa aaatgatgaa ggtttataca atcttagtgc tagtgagtgg
     2941 tataagcaaa ttattaaaga tttacaggac aaggatttgg aaaaagccga tgatcattat
     3001 aatggtatgg caagtgagca cgttgccgat cctttattgg aaactacttt aattatttta
     3061 gcacaagctc atatggatga agaggaatat aagttagctg aattttattt agatgaatat
     3121 aataaaaaat ttggaaattc gcgcaatgct gattatattc gttatcttaa aattaaagca
     3181 aaatttgatg catttgcagt gccaaatcgt aatcaggctt taatgcttga aagccaaaaa
     3241 gaaatagata cttttttgaa agattatcct tatacagaat atgaaccttt ggttcaaaca
     3301 atgcttacaa aatttaattt agcggttttt tatcttaata gtactataga aaatctatac
     3361 cagcgcatag ggcatgatga aagtgcgcaa atttataaac aaagacttca agaaagtgaa
     3421 ttttatcagc aaagtattat caaacctgag cttccttggt atagaagtat atttgaaaga
     3481 ttttaataaa caaggaaaat aaatgcagat tgaagagata caaaattatc cagcaaattt
     3541 accagtattg gttgaagatg aattattttt atatcctttt atgataactc ctatttttat
     3601 taacgattca tccaatatga aagctttaga tcttgcgatt aaaaatgata gtatgctttt
     3661 tgttgcacct tcaaagttgg aaaatggaag aaattttgat gaaatttata attgtggagt
     3721 gattgggact atcatgcgaa aagttccttt acccgatgga agggtgaaaa tactttttca
     3781 aggatatgct aagggtaaaa ttatagagca aatttctaat aaacctttag aagccaagat
     3841 agaacttata aaagaagact ttttagaagg aactaaaaaa gaagcgcttc ttgaagtttt
     3901 aaaagagaag gtaaaaaatt tggcaaatat tagtcattat ttttctccag atcttttaag
     3961 aacaattgaa gaaggttttg atgcgtctag gatttgtgat ttgattttaa atactgtgcg
     4021 tattaaaaaa caagttgctt atgagttttt tgttttaaca gatcttgagc aaaaattagt
     4081 aaaattaata gatttaattg cccaagaaat agaagccaat aaaattcaaa aagaaattaa
     4141 aaataaagta cattctcgta ttgataaggt aaataaagaa tattttttaa aagaacaatt
     4201 aagacaaatt caaaaagagc ttggttctga tacacaaaaa gaagatgagg ttagagagta
     4261 tcaaaagcgt ctggagttaa agaagaaatt tatgcacgaa gacgcttata aagaaatcaa
     4321 aaagcaaatt gaaaaattcg aacgcattca tcaagataat tccgaagcat cgatgattca
     4381 aacttacata gaaacagcat tagatattcc ttttgaaaaa atttctaaga aaaaacttga
     4441 tattaaagaa gtttcaaaac agctcaacca tgatcattat gcattaaata aaccaaaaga
     4501 acgcatagaa gaatattttg cagttaggga acttttagaa aaaagaaaaa tagcagaaaa
     4561 agatggtgct aaagttatac tttgtcttta tggacctcct ggcgtgggta aaacttcact
     4621 ggcaaattct gtttcaaaag ctttaaaaag agagcttatt cgcatagcct taggcggact
     4681 tgaagatgtt aatgagctac gtggtcatcg tagaacttat ataggcgcta tgcctggacg
     4741 tattacccaa ggactcatag aggcaaaaca aattaatcct gtaattgtat tggatgaaat
     4801 tgataaatta aatcgcagtt ttagaggcga tccaagtgcg gtgcttttag aaattttaga
     4861 cccagagcaa aattctaaat ttagggatta ttatttaaat tttaatattg atttaagtaa
     4921 agtcattttt atagcaacgg caaatgatat tagcaatatt cctgcacctt taagagatag
     4981 aatggaattt atagaactta gctcttatac tccaagtgaa aaatttcata taatgaaaaa
     5041 atatttaatt ccagatgagc ttaaaaaaca tggcttaaaa tccaatgaat tatctattga
     5101 tgatgaaact atagagttaa tcattagtga ttatactcgt gaatcaggag tcagaaattt
     5161 gcgtcgcaaa gtggcagagt tgtgtcgtaa gagtgctaaa aaactacttt tagaaaatat
     5221 taaaaaagtc attattaata caaaaaattt gaatgaattt ttagataaaa aagtttttga
     5281 aatagaaaaa aataatggag aaaatcaagt aggtcaggtt aatggtttgg cttggacaag
     5341 tgtaggtgga gatgttttaa aagtagaggc tgtaaaaatt aaaggtaaag gagaattaac
     5401 gctcacggga agtttgggtg atgtaatgaa agaatcagct agaattgctt ttagcatgat
     5461 aaaagtttta atcgatgaag gaaaaataaa aatacctaaa aaaataatta tcgatcctaa
     5521 agttaatgtt tatgatagtt ataatattca tatacatgtg ccagatggag ctactccaaa
     5581 agatggccca agtgcgggca ttacgataag cacagccatt gcttctattt ttagtgataa
     5641 aaaggttaaa gcagatgttg caatgacagg tgaaatagat ttaaaaggaa aagttttacc
     5701 aataggcgga ttaaaagaaa aattaattgc agcttataag gcagatataa aaacagcttt
     5761 aatcccaaga aaaaattacg aaagggattt aaaagatatt cctagtgagg ttagagacaa
     5821 tatggaaatc attgctgttg atacttttag tgatgtctta gaatatactt tggtttaatt
     5881 ttattttgag aataaatgta taagaaagca aactttttac aagtttgctt ttaaaagatt
     5941 atagtccttc aaaaggattg ttgattactt cttttctatc cactatataa gggataagag
     6001 ctacatgtct tgcgcgtttg attgcaactt ctaccatttc ttggtatttt ttgcttgtgc
     6061 ctgttaaacg gcgtggcatg attttaaatc tttcagataa agcatgtttt aacattgctg
     6121 tatctttata atcaataaat tcaacttttg cttcagtgta tttgcaatat ttgcgagagt
     6181 attttctttt ttctgccata gtttatcctt taaaatggta aattagtatc atcgctatca
     6241 taagcatcga tatcaatttc ttttaatttt tcttcgtgtt gtgggttttg gtttctttgt
     6301 ggagcggggt ttgtttttgc tttattaaaa ttttgatttt cactcatata aggatcatag
     6361 ctttgatttt catagtttcc actataattg ttgtttgaaa agctattatt gccaaaattt
     6421 ccgccttgtt gtggagcatt ggaattgcca agcatttcca tattttcaac ttgaatgcta
     6481 tgtttagagc gattttgtcc attttgatca ctccattgtt caaatctcaa acgtccttct
     6541 atgagtactt ttgaaccttt tgtaaggtat tggtttgcaa cttctgcggt gcgaccataa
     6601 aagcttatat caataaagca agtttcttct cttttttctc catttgtggt aaatcttctt
     6661 gttactgcta tagcggaagc cccaatagca ctaccgcttt gtgcataacg catttctata
     6721 tcgcgtgtaa gatttccaac caaaacaact ttgttaaaca tctttttcct tattgaattt
     6781 caggagcatc taaaggtttg atttcttttt tagattgctt aatcccgtgg cttagttttt
     6841 cccaagctgc aatttctttt ttgttttcat attttacgat taaaaatctt attacttctt
     6901 cagtgattct taacaccctt tcaagctcag cgatcaagtt tgtaggagct ttgaaataaa
     6961 tcacaaaata agttcctctt tcgtattttt tgattttata cgctaatttt ctagtgccca
     7021 ttggaacaac agtttcaatt tctgcaccat ttttggttag gacttcttta acgaattcca
     7081 acttcgcatt cacttcctct tcggtaagtg ttggttttaa gataaataaa acctcataat
     7141 gtttcatctt ttctccttat ggatattaaa gcccattttt atgagcaagg attttgcata
     7201 aagcaagact aaattatatc aaaatatact taattagtct tgaatatcca atgtcttatc
     7261 taaatttact ttgatttctt caagcatggc aaaacgtttt ttatacatgg agcgtttttg
     7321 tgaagggatt tcttctaggt ttttttgcga gtggtggagt ttatagtatt tgtgtttatc
     7381 gatttttatt aattctccac cattttctag ccaaattttt tgataatcta caaaatatcc
     7441 tttttctttt cctttttgag aacggatttg atttttttca tgtataccta aagtagcttg
     7501 aagttttaaa atttcacaaa gcatcttaga gcattctata agtaaagcaa cagggcgcaa
     7561 accatgacat tttttagtta aaattttatt aatttctaaa atattaaaat ctttgtattt
     7621 atatccttgt atgcaagaaa gtagaagatt attttctaaa gtaaagcaaa aattacattg
     7681 tgagatagtg tattttttaa attttaaaga aaaagcccaa aaaccttctt cgtaaacatt
     7741 atggttatat cctaaaaaag ctcaaaatct tcatcaaaag aaaaaatcat ttgttcttcg
     7801 ggaagaaatt taaaacaagt aagtccctta tcaacatcat aaataagtgt tttaacgcgt
     7861 tcatttgctt taaaactttt atcgcaaaat cttcttatag cattgtagca agcatagggt
     7921 ctttgagaga aaaagtcttt taaatgttta tttttttctt cattaagcgt tttttctaga
     7981 agccttactt gaggaaaata tagaattttt cttgcttgaa aacgcaaata gcgccaaaag
     8041 atgatacttt ttcttctatc agtaaaattt ggaatagggt aggaaaattt tttattcacc
     8101 tataatcctt gatatatcat tataagttgc aaagagcatt aagcttaaaa gtattgccat
     8161 gcctgtatag cttaaatatt caaaagcacg ctgtggaacc ttgcgtctaa aaatcatttc
     8221 ataaagatta aaaagtatgt gccctccatc aagcatagga ataggtaaaa gatttaaaat
     8281 gcctaaattt atagaaatta aagcagtgat aaataaaagc aaagtaaagc tattttgtgc
     8341 agcctttgag gtaatttcag tcatggtgat aataccgcct aaattttttg cttcaacttc
     8401 accacttatg agttttatta tacccttgat gatgagtgta gaagcttgaa aactttcttg
     8461 tacggcatat ttaaaacttt ctaaaccttg atgttttaca agagtgcttg taccatttgg
     8521 actgactcca agttgaggtt tttcaataat ttgcccaaag tcattgtatc cttgtcctat
     8581 ttttggagtt aaaataaatt ctaaattttt tccttctcta ttgattaata ttttcaaagg
     8641 ctctaaactt aaatgctttg aaatttcatc aaagctttga atttttacac cgttaatttc
     8701 taagatagta tcattttttt gaagtcctat ttcttgtgca gcagagtttg gcgctatgtt
     8761 tcctatttgc ggagcaagtt tgtttagacc taaatttcct atgataatat aaagaaaaaa
     8821 agctaaaatc agattaaaaa atggtccagc aaaaagaata taaatctttt ttaaaggact
     8881 taaaatgcta tagctatctt tgtctagatt ttcaaaacta ggacgcatat catcttgtcc
     8941 tttaagttta acatatcctc caagtggcaa agcgcttaag cgatagcttg tgcctttaaa
     9001 ttcacgctct ataagacttt ttccaaatcc tatgctaaag acttcaactt ttacacccaa
     9061 agatcttgca gctaaaaaat gtcctaattc gtgaaagaaa attaaaaatg agatgactaa
     9121 aacagttgct aaaaattcaa tagaataaaa tttaattccc aaaatcaaaa taacaattaa
     9181 aagcaataaa gatctcattt ttctcctttt ttttgagctt ttatataagt atagatgtat
     9241 tcaaatccag aataaagagt taaaatcaaa gctatgtaaa gtagaatttc tccgcctatc
     9301 cactccatga ttaaaaatcc tatcgcagtc atttgaaaag cggttttaag tttgcctgca
     9361 aaagaagcat tgacatttaa attttcgcta atcatcacaa ctctaaaacc tgtgataaaa
     9421 aattccctta ctaatataat ataaattacc cattcattag cttttcctgt aagcaaaagt
     9481 cctaaaaaag ctgctaaaac aagcatttta tcagctaatg gatctaagat tccacccagt
     9541 tttgtagttt gtttccaagt tcttgcgatg tatccatcaa aaaaatcact taaagctgct
     9601 aatgaaaaag ttaaggcagc aaaatagtta atccaacttt gatgaatatt ttcaaattta
     9661 taaattagta aaaaaaataa taaaggtgct aaaaccattc taaaaatcgc caagatattg
     9721 ggtaaattca taacaagcct tgtgaaatta aatgtaaaat tataatcaaa attgtataaa
     9781 atttaagcaa agacttagta aaaatacaaa aaagaatcag tttattttta tttaaatttt
     9841 gcttaaaagc aaaatttaaa taaattttac aacttcatca aaactaaaac gatttttttg
     9901 aggatttttt tcatcgttgc aatatcctaa agccaccacc aagcttgatc tttctttttg
     9961 aatatcaagt gataaataag aatcaagctt ttctttatca aaaccaccta tagtgcagct
    10021 tgctatattt aaagcattag cactgtaaag tatgctagct agagctatat gagcttgttc
    10081 tcttgcataa gatatttttt gttcttgatt tagagatttt aaaaaaggca tataagtatc
    10141 taagcgtttt tgaatttctg tttcactcat atctcttttt ctaagttttt cttcaaaata
    10201 atccaaaaaa tcaagtcttg aaatgatgat aattaatgca gcacaatctt ttacatgttt
    10261 ttgttgattg caaattttag aaagttcttc ttttcttttc tcatcttgca ctactataaa
    10321 tttccaaggt tccagtccta aggaactggg gcttaatctt gctatttcta aaatagaatt
    10381 taaatcctct ttattgagtt tttcattttt aaaatttcta caagaatatc ttgtgctaaa
    10441 aatttcaagt tcttttttca ttatttttcc ttgtaaaatt cgacgacttc attaaaattt
    10501 aagcgttgag tagaatattt tggttcgtgg gctttatatc ctaaggataa aattacagca
    10561 gtttcaaaag gataagttaa atgaagaaaa ttatcaaccc tagctttttc aaagccacct
    10621 atcatacaag aatcaatacc taagctcatt gcagctagcg acatttgcat catagcaaga
    10681 tagcattgaa gttgtgcgta atgatagagt tcattatcat tcattgcatt ggttttatgg
    10741 gtgtaaattt ttaaaatttt ttgaaaattt tcttcgctag aacctgagaa acgacgcact
    10801 tgtttttgtg caaattcatc tttgctttga agatcttttc ttgctagaaa aataatatta
    10861 tgactcgcac ttgctacatt ttgttgattg taacatagag ttgagagttt aagattgtgt
    10921 tctttttgtt ctaatactac aaatttccaa ggctcaaatc catgtgagct tggggctaag
    10981 actccacttt ctaagataaa atgcaaatcc ttttcattga tttttttatc attaaaaagt
    11041 ttacaagctc tgcgttttga aattagttct ttaaaattca ttttattcct taaaatcaaa
    11101 aaataataat attaattata aaatgcaaag cttaatcaaa aaatattata gtttgatatt
    11161 tttcttaaaa acaaaaccgg atttttcaaa acccattttt tggatataaa attcatgagc
    11221 ttgtgttcta aaaaaacttg aacttagttc taattcttca tatccttgat cttttgccca
    11281 aatttggatt tttttcaaaa aagcttgacc tatacctttt cctcttaaag cttcatctac
    11341 gacaaaatca caaatataaa gacaatgatt atgataaagt acattaaagg gcatgactcc
    11401 acaagctgct ttgtagcttc cctcattttc ataggcaaaa agtttataat gttgagtttg
    11461 tgtagcaagt tggattttgt ctaaaaaatc tttcaaagat aggttatttc ttaattgttt
    11521 tatcaaggga taaatttttt ccaagtcttc ttttagctta atttctttca tttttaaatc
    11581 ccttaaattt caaaaatctc aggttttaat tttaaaagta ggcaaaaagt tgccaaaaca
    11641 gcttgttctt gcataaattc acgatctcca tctaaataaa gcgtttcttg gataaaagtt
    11701 ccatctctaa acattgcacc tatataaata gtgcctgatt ttatttttcc ctcatctttt
    11761 tcgccaacta ctccgctaat agctaaggca aaatcaggat tagctgtttt aaaaatacct
    11821 tttagcataa aataaacaca acgttcactg tattcgccat tattttctaa gacgctttcg
    11881 ctaattccaa gccattcgtg tttgatgcgg ttggaataac ttataataga tccttcaaaa
    11941 atttcactta cacctgaaat tttggttaag gtgcttgcac aaagtccacc tgtgcaactt
    12001 tcagcaaaag aaatttttaa ttttttttct aaaagtttag agcttataaa atgtatagga
    12061 tctttaccta aaaatacctt ttgtccaaaa agatttttta cgctatttaa aaaaccatca
    12121 agttttccaa aattagcgca agtggcctta ataagcacaa gattatctaa aagcttggtt
    12181 gattttatac ttatctcata agattttgtt agggtttgca gtagcaatat agcgctttca
    12241 tcatccatgc caaaaatgca aaaatatgca aaatttaatt ttatatgccc aagaagattg
    12301 ggtaattttt cgcttggatt tattttaacg acattgattt ttgaatttga aaaattacac
    12361 acaaagctat ttttactaaa ttctgcttta tctggaacca aggtatcatc ttttaagata
    12421 agattatcat catttaaagt tgctaaaatt ttagcaacag tcgcataatg caaagggctt
    12481 gtaaataaag tgataaaatc atactgattt aagagatttt caagcaaaaa gggtaaatct
    12541 ttatcggttt tattttgtat gcgaatttcg ttgatttctt taaatttttc ttcataagtt
    12601 ctataaatat aatttttgaa tttttcgttt atagtaagct catctcctat aagataaagc
    12661 aaatgtttca taaattttcc tttttttctt ataattatag ccaaaaacaa agtagaaatt
    12721 aaagctaatt tgagtagaat ttaagattat taaaaattag gtggaaaaaa tggactacaa
    12781 agaaactcta cttttgccca gcactacttt tgctatgcgg gcgaatttag cggaacttga
    12841 accgcaaaga tttaaaaaat ggtttgagca aaattatgct tatgaaaaaa tgaaagaaaa
    12901 tcgcaaaaat gcgaaaaaaa gttttacctt acacgatggc cccccttatg ctaacggaca
    12961 tatccatata ggacatgctt taaataaaat tttaaaagaa actattatca aaacgcatta
    13021 ttttaaaggt gaaagtgtgc gttttactcc agggtgggat tgtcatggtt tacctataga
    13081 acaacaagta gaagtaaagc ttggagaaaa gaaaaaaagc ttaagcaaga aagaaattcg
    13141 tgagttttgc agacaacatg cgagtgaatt tgtagatatc caaagagaag aatttaaaaa
    13201 tttaggcatt attgcggatt gggataagcc ttatttgact atgaaatttg agtttgaagc
    13261 agcgatttat agaactttat gcgagattgc taaaaaaggc ttactttgtg agcgttctaa
    13321 acctgttttt tggagttggg cggcaaagtc agctttagcg gaagctgaag tagagtatca
    13381 agataaagaa gattattcta tctttgtggc ttttgattta gatgtaaaag cttgcgaaaa
    13441 attaggcgtt tcaaaagcaa gcgcagtgat atggacaact acgccttgga ctttggtggc
    13501 taatcaagct atagctttaa atcctaatga aaattatgtg atcactaaag aaggtttgat
    13561 ttttgcaagt gctttactta aaagtatggt agaaaaagga cttacaagtg gagaaattca
    13621 aaaagaactc aacgcaaaag aatttgaaaa acttgaagct atcaatcctt taaatggaag
    13681 aaaatctgtt ttaatcatgg gtgagcatgt attgatggat ggtggaagtg ggcttgtgca
    13741 tactgcacca ggacatggcg aagatgatta ctatgcttgt ttgaaatacg gtattgaagt
    13801 tttaatgcct gttgatgatg gtggatgtta tgatgaaact ttaagagcta aagagctttt
    13861 gccttctcat ttgcttgaag agtttatagg tcttcatatt tttaaggcca atgaaaaaat
    13921 tttagaactt ttaggcgaaa aacttttaca ttcttctaaa tttatacact cttatccatt
    13981 ttgttggaga acgcataagc ctgtgattta tagagctact aaacaatggt ttattttaat
    14041 ggatgagcca aaacttcaag gaaaaacttt aagagagtgt gcaaaagaac aacttttaaa
    14101 aacaaccttt tatccgcaaa gtggggtaaa aagaataggt tctatggtgg aaaatcgccc
    14161 agattggtgt atttcaagac aaagggactg gggaacgcct atagcctttt ttagagataa
    14221 aaacactaaa gaagtcattt ttgatgatga gctttttgac tttgtagcgg ctatttttga
    14281 aaaacacggc gctgatgcgt ggtgggagtt tgaaatcaaa gatttaattc ctacaaattc
    14341 aaaatacaaa gctgaaaatt tagaaaaagt atatgatatc ttagatgttt ggtttgatag
    14401 cggaagtact tttaatgcag ttttaaatag cggactttat gacgcaggag aaaaaagagc
    14461 aagtatgtat ttagaaggaa gcgatcagca tcgtggttgg tttcaaagct ctttgcttgt
    14521 aggtacagtg atcaatgaaa gcgcacctta tgaaagcatt ttaactcatg gttttaccac
    14581 cgatgaaaaa gggcaaaaaa tgtctaaatc taaaggcaat gtgatcgctc ctgaatatgt
    14641 agcaaaaacc tatggagttg aaattttaag actttggata cttttaagtg attattcaag
    14701 tgatttaaaa atttcagaca atatcttaaa acaagtgggt gaacaatacc gcaaaataag
    14761 aaacactata agatttttac ttgctaatac caatgattta aaagatttag aagttaaaga
    14821 atttagtttt attgataaat ggatattaag tcgtgcaacc aaagttttta aagcaagtaa
    14881 agaggcattt tttgcttatg aatttgctaa aggttttagt ttgcttttaa attttttaag
    14941 tgcggattta agtgggattt atcttgatat cagtaaagat aggctttatt gcgatagtga
    15001 aaatgcccaa agaagaaaat ccgctcaagt ggctatggct ttgatagcaa aagagctttt
    15061 aaatttactt gctccaaatt taagctatag tgtagatgag gctttagaac atgctaatgt
    15121 tttaatcaaa ggcgatgcaa aagatgtatt tgatctaagt ttaactcagg attttgatta
    15181 tgattttggt atagatgata catttttaat gagtgctaga gagaaatttt ttgaacagat
    15241 tgatatactt aaaaaagata aaatcattaa atctactttg gaattaaatt taaacatcag
    15301 ttttaataaa ttcccaaatg aggaattagc cgattggttt atggtaagtc aaatcagcaa
    15361 tgaaaatgaa gaaattttgg ctgaatttga agtagagaat gagaaattta aaatcaccaa
    15421 agcttcactt tgtaaatgcc caagatgttg gaaacttcaa agtaaagatg aagaaacacc
    15481 ttgtttaaga tgtgaagaag ttttaaaagg gattcaatgc tagaaaatcc tattccaaat
    15541 agcattatca tcacaactat agcggtggtt ttggctttta gtgctttagc agtatttttg
    15601 atcaaaaaaa caaaggaaaa taaatgataa ctttaaaaga agctttaaaa tactccaaag
    15661 aagaacttga aaatttaaaa aaagaactca atgaaaaagc aaaaaaagaa aaaaaaatag
    15721 gtgcttatat cgaacaattt ttagataaag acttaagtgt ttcaggtgaa ggtgtgcctg
    15781 tagctataaa agataatatc agcgtaaagg gctgggagct tactagtgcg agtaagattt
    15841 tacaaggtta tatcgctcct tatgatgcaa gtgtgattgt taatttaaaa gctaatggtt
    15901 tttctccttt tgggcgttgc aatatggatg aatttgctat gggaagttca acagcgagtt
    15961 cttattatgg caaaacttta aatcctttaa attttgagcg tgtgccaggt ggttcaagtg
    16021 gtggaagtgc tgctgcggta gcgggtggct tggctttggc aagtttgggt tctgatacag
    16081 gaggatctgt acgtcagcct gcagcttttt gtggttgcgt aggatttaaa ccgagttatg
    16141 gaagagtgag tcgctatggc ttagcttctt attcttcaag tttggatcaa attggggttt
    16201 taacgcaaaa tgtagaagat gcggcaattt tatatgatgc gatcgcagga tatgataaaa
    16261 tggatagcac gagtgcaaat atcgagttta tcaaaaccgc tccaaattta aatgcaaata
    16321 aaaaattaaa aattgcagtg attgaaaatt atgtcaatga tgcagatagt gaagtaaaaa
    16381 acgcactttt aaaaaccata gatatgttaa aagctaatgg acatgagatt gtatataaaa
    16441 atttgcttga ttctaagttt gatatcgcag cgtattatat catcgcaaca gctgaagcaa
    16501 gtgcaaattt aagtcgttat gatggggtgc gttatggcaa gcgttctgaa aatatccaaa
    16561 atttaaaaga aatgtatgta aatacacgca gcgaaggttt tggagaagaa gtaaaaagaa
    16621 gaattttgtt aggaactttt gttttaagca gtggatatta tgatgcgtat tatattaaag
    16681 cacaaaaagc tagagctttt attaaggcaa aatatgaaga aattttgcaa gattgtgatc
    16741 ttatttttat gcctgtaacg cctacaacgg cttttaaatt tgatactcaa aaaagcccta
    16801 tgcaaactta tttagaagat gtttatacta tctctgtaaa tttagcagga cttggaggca
    16861 ttagtgtgcc tgttgcaaaa gataaagaag agcttaatat atcagcacaa ctgatttgca
    16921 aagcttatga tgaacaaacc ttgttagatg gggctttaag tttagaacaa atgattaaac
    16981 attaaggatg aaagatgaaa attgtaaaaa gagctttaac ttttgaagat gtattattgc
    17041 gtcctgggta ttctgaagtt ttacctaagg aagtaaaaat tcacactaaa ttaacaaaaa
    17101 atatcacttt aaatatgcct ttaatctctg cggctatgga tacagttact gaacacaggg
    17161 ctgctattat gatggcaaga cttggagggc ttggagtgat tcataaaaac atggatatag
    17221 cctcacaggt tagagaagta aaaagagtga aaaaaagcga aagcggggtg attatcgatc
    17281 ctatttttgt aagtcctaag gcaagtgttg cggaagcttt agaaattatg gcagagtata
    17341 gaatttcagg tgttcctgta gtagatgaag ataagaaact aataggcata cttaccaatc
    17401 gtgatttaag atttgagagt gatttttcaa atttggttga aaatgttatg actaaaatgc
    17461 ctttaattac tgctccaaag ggttgtactt tagatgatgc ggaaaaaatt ttcagcacca
    17521 acaaagtaga aaaacttcct atagttgatg aacaaggacg cttggaagga cttatcacta
    17581 taaaagatct taaaaaacgc aaagaatatc ctgatgccaa taaagataat tttggaagat
    17641 tacgcgtggg tgcggctata ggagtagggc aaatggatcg tgtgaatgct ttagttgaag
    17701 caggcgttga tgttgttgtg cttgattctg cgcatgggca ttccaagggt attattgata
    17761 cagtaaaagc aattaaggct aaatatccaa atttagatct tatcgcagga aatatcgcca
    17821 ctgcagctgc agcaaaagca ctttgtgaag caggagtaga tgcggttaaa gtaggtattg
    17881 ggccaggaag tatttgtact acacgtattg tttcaggtgt gggcgtgcct caaatttcag
    17941 ccattgatga gtgcgtggaa gaagcaaata aatttggcgt tcctgtgata gctgatggcg
    18001 ggattaaata ttcaggtgat atcgcaaaag ctttagctgt aggtgcgagt tctgttatga
    18061 taggatcgct tttagctgga acggatgaga gtccaggaga gctttttact tatcaaggaa
    18121 gacaatataa gtcttatcgt ggtatgggct cacttggggc tatgcaaaag ggaagttcgg
    18181 atagatattt tcagcaaggt actgctcaag ataaactcgt tcctgaaggt atagaagggc
    18241 gtgttcctta tgtgggaagt ataagaagcg tggtgcacca acttttagga ggtttgcgtt
    18301 cttctatggg ttatgttggg gctaaagata tagaagattt tcaaaaaaga gctgaatttg
    18361 ttgaaattac taccgcaggg cttaaagaaa gtcatgtaca tgatgttact atcactcatg
    18421 aagcaccaaa ttacaaggtc aatcatcaat gagttttgaa gaaaatttaa aacacgctaa
    18481 tgaatctttg gaaaaattaa acaatcaaga gcttgcctta gatgaaagtg taaaaattta
    18541 caaagagggt ttagaaagta tcaaaaaagc aagacttgag cttgaaaaag caaaattaga
    18601 agtggagcaa atcgatgagt aaaatagcgg ctttacagtt tccaacttta gctttaagtg
    18661 aatcaaggct tgattattat cttaaagctt caaaagacaa tggagcaaat ttggtagttt
    18721 tgggcgaata tgtgatcaat agttttttta cagaactttt gcatatgcca aaaaatatga
    18781 taaaagagca aagtgaagct aaaaaagaaa gcttgattaa acttgctaaa aaatacgaat
    18841 tagaaatcat cgctccttat gtaagcgttg aagctaaaag ttataaaaaa ctttgcttaa
    18901 aagttactcc aaatggtgtt aaaagttatg aacagcaaat tttaatgcct tatgaacatt
    18961 ggaatgaaga aaaatttttc agcaacaaaa cttcatcaga gttaaaaatt tttactttta
    19021 attatgaaaa attaaaatgt gctttacttt ttggttttga ggcgcatttt gatatttttt
    19081 ggcagcagat tatgacgaaa aaaattgatt tggttatcgt tcctagtgct tgtacctttg
    19141 aaagtaaaca aagatgggaa gaacttttaa aaacaagagc ttttttaaat tctacaagca
    19201 ttttaagagt aaatcgcata ggcaaaacaa aagatgagtg gaatttttac ggcgatactt
    19261 tgtttatcaa tgcttttggc gagatagaaa gtaaattagg ttctgaagaa gaaatgctta
    19321 tcatagagcc taaaaaaagt gatgaagcaa gaaaactttg gggttttgaa aagataataa
    19381 aagaatttaa aaattaaatt tatacttata gatttataag tttataaaag ttatctagag
    19441 ctgatagaag ctaaggttta tattttcttt ttagtaaaaa agtgctaaaa tttagccttt
    19501 aaagtataaa ggtttaaatc atgcaaaata tccattttat cggcataggc ggtataggaa
    19561 tttccgcttt agcaagattt ttaaaagaaa aaggttttaa gattagcgga agtgatctta
    19621 aagagagcaa aatcactaaa gaactagaaa aagaaggggt taaagtaagc atccctcatc
    19681 ataaagacaa tattttaaac aaagatttag ttatttattc tgctgctatc aaagaagaaa
    19741 atcctgaatt taaacatgct aaagaattag gcattaaatg cctttcacgc aaggaagcct
    19801 tacctcttat tttagaagat aagcgtgttt ttgcagttgc aggagcacat ggaaaaagca
    19861 cgacttcaag tattttagct tctttgcttg atgatgcttc tgtgatcatc ggagcgattt
    19921 taaaagaatt tggttcaaat atgatttata aagaaagtca aaaccttgtt tttgaagctg
    19981 atgagagcga tagttctttt ttaaattcaa atccttattt ggctatagtt accaatgcgg
    20041 aagcagagca tttagatcat tatggcaatg aagtttcaaa actccatcat gcttatacgc
    20101 agtttttaga tgtggctaaa attcgcgtga ttaatgctga agatgagttt ttgaaaaatt
    20161 ataaaaatga gtcaatcaag ctttatccaa gcaaagatat taaaaactgc accatgtgta
    20221 tagaaaattt caaacctttt acgagttttg agttaaaaga tttaggtgag tttaaagttt
    20281 ttggtatggg atatcattta gctcttgatg cgtctttggc gattttggcg gctctaaatt
    20341 ttttagatat agaaacgata agaactaggc ttaaaaatta tcaaggtatt aaaaagcgtt
    20401 ttgatatttt acatgctgat gaaaatttgg ttttaatcga tgattatggt catcatccta
    20461 ctgaaataaa agcgacttta agcgcagcac aagaatacgc aaaattaggc ggatataaaa
    20521 aaatcacagc catttttgaa ccccaccgct acacgcgttt ggctgcaaat ttaaaggaat
    20581 ttgcaaaggc ttttgaaggt gttgatgagc ttgtaatttt acctgtttat gctgcaggag
    20641 aagagcctat agaacttgat ttaaaagcgg tttttcctaa ggctttattt gtggaagata
    20701 ttaaaagaga gggtaaattt ttggtagctt ctaagggaca ggtttttgaa gaagggctta
    20761 ttataggttt tggtgcagga gatatcagta ataaattaag gcaaaagaat gagtaggttt
    20821 tttttatatc ttttaatcat cttaatttta gccttaatta cttttgtttt gcgtgaaaaa
    20881 ttgggcaaaa aaaccaaacc tttttttggt gttttgcttg tgatttttat tgttttagca
    20941 gtattttttg aatttgaaaa tacgcaaaaa agtcatttaa gaacagatat tatcgtagct
    21001 tttaatcaaa ataaaaatat tttatgtaaa gatatcaatg tttctaaggc gtattttaat
    21061 tatgaatttg gtacaggaag ttttatttca aaagataata atcaaagttt taattcttta
    21121 attatagata ttaaagattg taggttaaat gatgaatgat acaaaagaag aattgatctc
    21181 aaagcttgat ttaaacagct atttagaaga gtttaaagcc ctttttgcaa gagataaaga
    21241 gatttttttg caaggagatt ctaatcttca ttttaaacgc atacatgagc tttgtgaggt
    21301 ggaatttcct actatgccag agcttagcaa tcttgataaa gccttagttc atttaagcaa
    21361 gcaaggaatt ttgcatttag atgaaatttt tgaatttgta aaaatttttc gttattttga
    21421 aaagttaaaa aaaataaaac taggaacaaa tttagactct tggttgcaaa agatagaatt
    21481 tgctagtggg gctttggagc tttgtttgaa tttcgatgaa aaaggggagt taaaagaaag
    21541 tttagatgaa agacttgtaa atcttaatac tgctttaaga ttaaaaaatg aaagcataat
    21601 agctgagttt aagaaatttt gctatacaaa agctttaatg ccttatctta tcgatacaca
    21661 aatccatctt ataaacaatc ttgaagcctt gcttgtaaga ggcgggttta atcacgctat
    21721 taaagcaaaa atcataggca gaagtagtgg cggtggcttt tatatcgtgc ctttaagtgt
    21781 tgagaatttg caaaatgata tagaaaaaat caaaaatcaa aaagaagaaa tttattatga
    21841 atacgctaaa aatttctcag cttttttagc aaaaaatcta ccttttttaa aatttatcaa
    21901 tacagccttt gatctttttg atcattatag tgctagggtt ttgtttgcta aaaaaaggga
    21961 ttttgaattt gttttgtgtg atcaaagtac ggatttggtt cttaaaaatt tcgcccatcc
    22021 tgctttaaaa aatccaaaaa gcgtgagttt ggaatttaaa aaacaagttt taatcatcac
    22081 aggggtaaat gcaggcggaa aatccatgct tttaaaatcc atgttaagcg cagcattttt
    22141 agctaaacat cttttgccta tgcatataaa agcaagtgaa agtaaaatcg gtacttttaa
    22201 agaatttgat gccatcatag aagatccgca aaatgttaaa aacgacattt caacttttgc
    22261 aggaagaatg ttgcattttt ctagactttt ttctaagaaa aatttgcttt taggtatcga
    22321 tgaaatagag cttggaacag attttgaaga agcggcttgt ttgtatagtg tgttaatttc
    22381 aaaactcata gctaataatc ttaaaatcat catcaccacg caccacaaac gccttgctat
    22441 gcttttagca aagaatgagc aagttgaact cattgctgct ttatataatg aagagctttc
    22501 acgcccaaaa tatgagtttt taaaaggtac tataggaaaa tcttatgcct ttgaaaccgc
    22561 tttgcgttat cagattccgc cgaatttagt tagcgaggct aaaaagcttt atggcgagga
    22621 taaagaaaat ttagaagagc ttgtgggtaa aaatatcaat cttgaattag aactaaaagc
    22681 taagcttgaa aatgttgaga aaaaagagca aaaagtcgat gaaattttac tttctttaaa
    22741 agatcaaaaa gaaaaaaatg aacaagaatt tcgcacgagt ttgagaaatt tagaatttaa
    22801 atttcacaaa gccatagaag aagctaagaa aaccatacag cttaaagaca caaaagataa
    22861 gcaaagaagc cttaataaag ccaatgaact taaaaaagaa atcatcttgc caagtatgga
    22921 gcaaaacgaa gaattgcgtg tgggggattt tgtaaaatat gaaaaaatta agggtaaaat
    22981 cataagcatt tctaaaaacg atgctatggt tgaaagtgat gggatcaaac ttcgtgtgcc
    23041 tttaaaactg cttaaaaaaa gtggcgcaat gccaaaaaaa gtagcaaaaa caagtataag
    23101 cataagcaaa ccaagcaatc taagtgtaac tttggatttg cacgggctta ggagtgatga
    23161 agctatttca aggcttgata aatttatttc agatgctttg cttgcaggct ttgatgaagt
    23221 tttagtttac catggtatag gaacaggaaa gcttgccttt gctgtaagag agtttttgaa
    23281 aactcataaa agtgtcaagg gctttaatga cgcaccgatc aatcaaggtg gctttggtgc
    23341 taaggtggtg agattataag gaaataaatg attacaaaag ataatttaaa acaagttcta
    23401 gaaaacttag gctttaaaaa taaaaatgaa aattatgtaa aaacaatcaa taattacaca
    23461 cttttaatag attataaaaa ccaaagtatt aattacccaa aagaaataaa aattcacgat
    23521 aaaactactt ctaatttttc acaccctgaa aattttgtag tttttgaatg tgtgcataga
    23581 cttttagaaa aaggttataa ggctgaacat ttagagttag agccaaaatg gaatcttggc
    23641 agggataaaa aaaggtggta aggctgatat tttagtaaag gataatgaaa acaatcctta
    23701 tttgattata gaatgtaaaa ccacagattc taaaaatagt gaatttataa aagaatggaa
    23761 tagaatgcaa gaagatggcg ggcagctttt ttcttatttt cagcaagaaa aaggtgtaaa
    23821 atatctttgt ctttatacaa gtgattttag cgataagtta gaatataaaa attacatcat
    23881 acaagcttac gataacgaag aatatctaaa agaaaaggaa ttacaaaatt cttataaaaa
    23941 atctaataac aatatagaac tttttaaaac ttggaaagaa agttatgaac tgcaatattt
    24001 taaacaaggt atttttgaag caaatgtcaa tgcttataaa attttagaaa ttactccaac
    24061 ttttgataat cttaaggaac ttaaagaaga aggtaaatat cacgaatttg caaaaatttt
    24121 acgcaagcat aatatatcag gcaaggaaaa tgcctttgat aaacttgtaa atatttttct
    24181 ttgtaaaatc tatgatgaaa cttttaataa aaacaatctc aaatttggat attttggtgt
    24241 aatggcagat acttatgcaa atatgcaaga tagattaatg tggctttata aagaagc
//
LOCUS       DARBAC010000010        24170 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.010, whole genome shotgun sequence.
ACCESSION   DARBAC010000010 DARBAC010000000
VERSION     DARBAC010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24170
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.010"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..809)
                     /locus_tag="SB799_000290"
     CDS             complement(<1..809)
                     /locus_tag="SB799_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867557.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEK"
     gene            complement(793..1305)
                     /locus_tag="SB799_000291"
     CDS             complement(793..1305)
                     /locus_tag="SB799_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867558.1"
                     /translation="MKKILIFCIGLFLGACGYVPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            complement(1302..3731)
                     /locus_tag="SB799_000292"
     CDS             complement(1302..3731)
                     /locus_tag="SB799_000292"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEG0867559.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYTQKSGKLIHSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEIFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            complement(3741..4712)
                     /gene="secF"
                     /locus_tag="SB799_000293"
     CDS             complement(3741..4712)
                     /gene="secF"
                     /locus_tag="SB799_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEG0867560.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            complement(4712..6292)
                     /gene="secD"
                     /locus_tag="SB799_000294"
     CDS             complement(4712..6292)
                     /gene="secD"
                     /locus_tag="SB799_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEG0867561.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSEEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVSDSRNPNLKYTLKSIPILDGSMLTDARVGISDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVIFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRASIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKSNNTRFWFGYRRR"
     gene            complement(6285..6557)
                     /gene="yajC"
                     /locus_tag="SB799_000295"
     CDS             complement(6285..6557)
                     /gene="yajC"
                     /locus_tag="SB799_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEG0867562.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            6530..7855
                     /locus_tag="SB799_000296"
     CDS             6530..7855
                     /locus_tag="SB799_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEG0867563.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKNSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWLNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELILKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKDWKNLSKEIFNDKK"
     gene            complement(8093..9289)
                     /locus_tag="SB799_000297"
     CDS             complement(8093..9289)
                     /locus_tag="SB799_000297"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEG0867564.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCEPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            9429..10652
                     /gene="sstT"
                     /locus_tag="SB799_000298"
     CDS             9429..10652
                     /gene="sstT"
                     /locus_tag="SB799_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEG0867565.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIVLGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFLASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSEIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFIVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVTTMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            10662..11549
                     /locus_tag="SB799_000299"
     CDS             10662..11549
                     /locus_tag="SB799_000299"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEG0867566.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLKGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHIHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVK
                     NGVAIRMAALKKLILENEG"
     gene            11553..13274
                     /locus_tag="SB799_000300"
     CDS             11553..13274
                     /locus_tag="SB799_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEG0867567.1"
                     /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYALNAN
                     EFLQALKDYENLNQALGKIMTYAYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSQEFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEILSKMYDEDRKTRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFNQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTDKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            13268..13705
                     /locus_tag="SB799_000301"
     CDS             13268..13705
                     /locus_tag="SB799_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867568.1"
                     /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDF
                     NPELPKELDVKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQIENNILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            13702..15777
                     /locus_tag="SB799_000302"
     CDS             13702..15777
                     /locus_tag="SB799_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEG0867569.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIKYISYCKNEGKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAVLFRVNALSRAIEEAFMKEKISYKLLSGMRFYERLEIKD
                     LISYLRLILNPNDDLSFRRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPEASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVAITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            15774..16592
                     /gene="truB"
                     /locus_tag="SB799_000303"
     CDS             15774..16592
                     /gene="truB"
                     /locus_tag="SB799_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEG0867570.1"
                     /translation="MNKIFAAFKPRGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIKNIKEFDLANLQQII
                     DQMQGIISYTPPQFSAKRINGTRAYELAKKGIEANLKPCQMEVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYINLKPNF
                     IKDLNKLENGAKIFVEELKFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            16586..16813
                     /gene="csrA"
                     /locus_tag="SB799_000304"
     CDS             16586..16813
                     /gene="csrA"
                     /locus_tag="SB799_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HEG0867571.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            16810..17577
                     /locus_tag="SB799_000305"
     CDS             16810..17577
                     /locus_tag="SB799_000305"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEG0867572.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDLFDELELVDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSKRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLMNETLNLKLNLQELINLSIQLGSDIAFFLSGFHSANVSGCGEIIEEF
                     EDDIPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
     gene            17574..18026
                     /gene="smpB"
                     /locus_tag="SB799_000306"
     CDS             17574..18026
                     /gene="smpB"
                     /locus_tag="SB799_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEG0867573.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            18037..18639
                     /locus_tag="SB799_000307"
     CDS             18037..18639
                     /locus_tag="SB799_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEG0867574.1"
                     /translation="MKKILTLFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFADDYGAYYFLSNGGSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNAPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            18639..18929
                     /locus_tag="SB799_000308"
     CDS             18639..18929
                     /locus_tag="SB799_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HEG0867575.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE"
     gene            18926..21055
                     /locus_tag="SB799_000309"
     CDS             18926..21055
                     /locus_tag="SB799_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0867576.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSIDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIQDSRSYSSYLLKKHNINLTKIQELQNHENIQNLSNHTSNLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLIDELGASFALNPKAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTEFCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKVKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNGKLEFIF"
     gene            21030..21677
                     /locus_tag="SB799_000310"
     CDS             21030..21677
                     /locus_tag="SB799_000310"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEG0867577.1"
                     /translation="MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(21700..22989)
                     /gene="cetZ"
                     /locus_tag="SB799_000311"
     CDS             complement(21700..22989)
                     /gene="cetZ"
                     /locus_tag="SB799_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HEG0867578.1"
                     /translation="MFGAKKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVI
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSG
                     KYIRYGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLEDVNQSVELAKEARECMEKIRESSAEVAKAMS"
     gene            complement(23070..23696)
                     /locus_tag="SB799_000312"
     CDS             complement(23070..23696)
                     /locus_tag="SB799_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEG0867579.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIAAMGFKMIIVGLKDIFNL"
     gene            complement(23711..24070)
                     /locus_tag="SB799_000313"
     CDS             complement(23711..24070)
                     /locus_tag="SB799_000313"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HEG0867580.1"
                     /translation="MKELNEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLY
                     KSEDKFKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     VRHCVNSISLEFVKTKD"
BASE COUNT         8762 a         3916 c         3307 g         8185 t
ORIGIN      
        1 tttttttcat tcgatttatt aagtaagaca agcaattcat agattttttt tagattatca
       61 ttaaaaaaat ttaaattttt ttggacatac atattatcaa ccattatacg atgatttata
      121 aattccatta gttcattttt aaaattttct tcacctatca caaaaggctt ttgtgttaaa
      181 ttttgtataa aaccttgaat ttttaaatct tccaccaatg aaggatttaa acccaagcat
      241 aataattcac taaagtgctc ataactacgc tcttcaagtt taactaagag ttttttaatc
      301 acgctatcat aatcatcata tttactaatg ccatatttac gagcttgttc ttctaagtca
      361 ttttcatcgt aatttctttc aagctctttc cattttttag taagcaagta aatactttca
      421 ctatccatag ttttagaaat tctaatcgaa gtcaccttag ccaaatctct tatcttttta
      481 tccttactta tttgcaaagt tttagatata gtatataaaa aatcaaaaaa ttcactaaat
      541 tgttttccgc tttgtctatt taaaacagaa attaaaaaac taattagttc ttctaaactt
      601 cttatagttt tagaatttaa ttcttgttga taaatcggta aaagcaaggt tttgtatttg
      661 tcaagtttag ctttatttga gcttgtgata ccatatttta aagataattc ttcaaaaatt
      721 tccgtataat tttcaggagt tggttttagt tttctttctt ttaatgcaat taaagtttgc
      781 tttgctattt cattagtatt tggaatcacg tttttgccct ttaatagcaa ttacggaaat
      841 aaactcatca aatgcctcgc ttgaagctgc tcgaatagcc tcataccttg cagaatcact
      901 aataatacta tttggagaaa tttcaaaatt ataacttcca cttgtactaa aagcctgact
      961 tgaaccatct ttaaagacaa cattaaaatc taaatttaat ttagctttat aactaataac
     1021 atagccattt ttatcataag ctaaaggaat aaattctaaa ttattcattt taacattaat
     1081 tacatcatct gcctcgtgtt ttaaagcaag tttacgccct aattttgaaa ttaccatttc
     1141 ttttaaagta tcggcaacat agatactatt ttttgggtct tgttgactta attcaacatt
     1201 aacataaacc ttctcatcga aaatattatt agcgattttt gatgtaggaa catatccaca
     1261 agcacctaaa aataaaccta tacaaaaaat taaaatcttt ttcatttaat cactagatta
     1321 actagctttc cttccacata aatttcttta actatactct taccttcaag ccatttagca
     1381 gtattttctt ttgcaaaagc taaaatttct tctttgctcg cactacttga aatttcaaat
     1441 tcagcccttt ttttaccatt aatacttaca gctaaattta aagtatcttt tacaaaaatc
     1501 tcttctttaa gttctaattt tttgaaattt ttacatttaa aaagctcctc gctaagctca
     1561 aaacaaacat gaggaataat aggctctaaa atatttaaaa taatataaaa agcctcttgc
     1621 tccaaagctt cgtttttaca aagcgctaaa gcatttaaag cttccatgca agctgcaatt
     1681 aaagtattga aagcaaaact ttgatgataa acttcaaaag attttttcaa agcttcatat
     1741 acctttaatc ttgcatattt ttcttctttg tttaaatttt cttgttttaa ttctacaagc
     1801 tcaccttttt taacattttg cgccctatca taaagtttgc aaataaatct ataagcccct
     1861 tcaacagcat catcattcca ttcaagctct ttagccggag gcgcagcaaa aagtataaaa
     1921 agtcttgcgg tatcagcacc gtatttttct ataatctcat caggatctac aacattgcct
     1981 tttgattttg acattttagc accatctttt aacaccatac cctgagttaa aagtctatca
     2041 aaaggttcat tttgcgttaa ataacccaag tctcttaaag ctttttggaa aaatctcgca
     2101 taaagtaaat gcaagattgc atgttcaata ccacctatat attgatccac actcatccaa
     2161 tacttcacac ttttttcatc taaagctttt tcctgccaag ttttctcatc acttgcaaaa
     2221 cgtgcaaaat accaagaact ttcaaaaaaa gtatctaaag tatcgctttc tttttgagcc
     2281 tctttgccac atttgggaca aatacaattt ttccaagttg gatgtttatc aagtggattg
     2341 ccctctcctg taatttgcac atcttcaggc agagtaatag gtaaattttc tagtttttga
     2401 ggtactatac cacagctttg acatttaatc ataggaatag gcgcacccca atatctttga
     2461 cgcgaaacac cccaatcacg aattttaaaa tttacaaccc tttttcctat atttttagct
     2521 tcaaactgag aaataatttt taatcttgcc tcattacaat caagattatc aaattcttga
     2581 ctatggatta attttcctga tttttgcgta taaggtaaat tttcttgagt ttgaataact
     2641 tgtttgatgg caagattata ttttgttgca aattcaaaat ctctttcatc atgagctgga
     2701 acagccataa ccgctccact accataatca gccaagacaa aattagccac ccataaagga
     2761 attttttctc cgcttaaagg atgaatggca taaattccta aaaaataacc ttctttttca
     2821 gaactttgtc tttctcttgg gctttgattt tgaatagctt tgattttatt taatacatct
     2881 tgatttaata aattttgcga aagcaaattt tgaacaattt tatgttctgg agctaaagca
     2941 atatacgaaa ctccataaat tgtatctgct cttgtagtaa aaacttctaa agaactttct
     3001 ttagtttttt gcttgctttc ttcgtctaaa tttaaagaaa attccaaacc ttcgctttta
     3061 ccaatccaat tttcttgcat agttaaaact tgattaggcc atttatcttt taattcttct
     3121 aaatctttta aaagttcctc agcataagca gtgattttta cataataacc tggcattttt
     3181 ttctgcacca cttcatgacc acaacgccaa cattttccgt cttcaacttg ctcattagcc
     3241 aaaaccgttt gatcttgctc acaccaattc acatttgctt ctttagtgta aatcaaacct
     3301 ttttcaaaca tcttaataaa aaattcttgc tcaaattttg tataaagtgg atctgaagta
     3361 gcaagcattc tttttttaga aaaagaaaaa cctaaagaaa aaagttcttt tttcatataa
     3421 gctatatttt cataagtcca tgacttagga tgaattttat gtttaatagc tgcgttttca
     3481 gcaggcatac caaagctatc aaaacctata ggatgtaaaa cattaaatcc tatcttgcga
     3541 taatatcttg ctaaagcatc acctatagta taatttctta catgccccat gtgaatgcgt
     3601 ccgctaggat aaggaaacat cgataaaata tattttttag gcaaatttaa atcatctttt
     3661 ggctcaaaat attcattttc atcccaaatt ttttgccatt ttttttctat taaacttgct
     3721 tcataagcca taaattctcc ttacactgtt cctttttcat acattgcacg attgcgttct
     3781 ttatcttgtt ttctttttgc tttttcaatt tctttatttc taaactcaag cacactaaat
     3841 ttaaaccata ataatgtcgg acttgcaaca aaaatagagc ttaaagttcc cgctataata
     3901 cctacaatta aagccaaaga aaatccttgt atcatttccc cgccaaagaa ataaagtatc
     3961 acaacggttg ctaaagttaa ccctgaagtt aaaaccgttc ttgataaagt tgctgaaaca
     4021 ctttcattga taataggtgc aagttcggtt tttttactgg ttttaatgcc ttctctgatt
     4081 ctatcaaaaa taataattgt atcattcaaa gagtacccaa gcacagttaa aacagcagcc
     4141 aaagtatcta aattaacatc aattttaaat aaagaaattg cccctaaagt aatcacaaca
     4201 tcatgaattt cactgattat agccgcaaga gcaaaacgcc actcaaaacg caacgctatg
     4261 taaattaaaa ttgctatcaa agatacagct atagccataa gtcctttatt tctaagttca
     4321 tcacctactt ttggacctac cacatcagca cgacgcactt caaattttcc cgtatccttt
     4381 aaaagagtgc ttatatgctc gcctatatca ttgcttacat tatcgttgct tcctaaaaag
     4441 cgtatggtta cttcttcatt gcttccaaat tcagttacag ataaattttg aaaagttcct
     4501 tgtttttcta aaatttctcg gatttgtgtt ataggagctg cattttcata tttaagctga
     4561 actaaagttc ctccgctaaa atcaatacca tattgcaaac ccctatccca aagcaaataa
     4621 atagaaccaa aaaacaaaat aaaagaaaga gaaatagcag caaaacgcat tctcataaaa
     4681 tcataaattt tcttttcgct aaaaaactgc attatcttct cctgtaacca aaccaaaatc
     4741 ttgtattatt acttttttct atgcgttgca taaaataatc aaacattccg tgagttccta
     4801 aaatagctgt aatcatagaa acgacaatac caattcccaa agtcacagca aaacctttaa
     4861 ctgctcctgt tccataggca taaagtgcta ccgaagtaac taaagaagtg atatttgaat
     4921 ctataatcgc actcatagca tttttataac cttgttctat actagctctt atatttactc
     4981 catctcgcaa gagttctcgt atgcgctcat tgataatcac atttgcatct accgccatac
     5041 ccacagttaa aacaagtcct gccatccctg gtaaagttaa agttgctcca aacatagcca
     5101 taacagccac tactaccaaa acattaacca acattgcaat atttgcaaaa attcctgcca
     5161 caccgtaata catcatcata aatattacaa taaaaaccga tgcaccgatt aatgctatca
     5221 tactcatttt aatactatca gcacctaaag atggtcctat acttctttgt tcaagtaatt
     5281 ttacaggcgc aagcaaagct ccacttctta aagctaccgc cacatcacgc gcttcttctt
     5341 gggtaaaagc tccactgatt tgcccactac ctccgcctat acgttcattg atagatggag
     5401 cagaatacac tttattatca agtacaatag caagacgctt tccaacattt gctcctgtat
     5461 aatcagcaaa ttttttagaa ccctcggcat ttaaagtaaa attaatcaca ggataattac
     5521 tcttatcact aatccctact ctagcatcag taagcataga tccatctaaa ataggtatgc
     5581 tttttaaggt atattttaaa tttggatttc tagaatcaga cactaaaatc agtccataac
     5641 tcgcagcctc agcatcgctc attgtagaag cttgacccat tttagaatca tcaacttcca
     5701 taagttgcaa atgtgctgct tttgtgatgc gctcttttgc tcttagttca tcttctttgg
     5761 ttttaatccc tgcaagttca accaaaatct tatcatcacc ttgtttagca actgttggct
     5821 ctgctaaacc aaattgatca agcctatttc ttatggtttc aactgcttgc aaaagtgcaa
     5881 aattttctat attttttact tcttctgagg taaaagaaat tttatagtgc atattttcac
     5941 tttgtatatt aattcctttt atttctttaa gcaaattttc aacttttgca atatctgcat
     6001 tatcaagcaa agtaaattct aaaatatcat catgggtatt taagccatca tttaaaatat
     6061 tttctttatt aaaagaataa ctcaatgaag atgcaattga ttttatttta gattttacag
     6121 cttcttcatt atctacacct aagagcatat aaagcccgcc ttgcaaatca agccctaaat
     6181 taatcttcgc accacgttct gactgcaaaa aagaagggag tgaaaaagcc actccaaaaa
     6241 taaataccgc tataaaaata atcaagcgat aattgatttt agaattacgc atcaattttc
     6301 tttgctataa attctcttga aatttttgca gtaacattgt cttcattaag cttaactttg
     6361 ataaaatcct cctctggttt tacgacttcg caaataagtc cgccattagt gatgatttta
     6421 tctccttttt gcaaagactc aagcatttgt ttatgtgctt ttgcttgttt ttgttgcggt
     6481 ctgatcacca agaaataaaa aattgcaaat aacactacaa gaggtaacaa tgaagttaaa
     6541 attgaatttt ctgccatatt tttcctttat tccaaaaaaa ttaaacacta attctatcat
     6601 ttttaaaata ataaaagtct tttttattgc aattttactt tcaaattcta tttatctatc
     6661 attttttgaa aatattttta cacaaactat tagcccattt ttagctattt ggggcttagt
     6721 tttactccta aaaagtaaaa attctaaaca atatttttgg ataggttttt ttgtagggat
     6781 tctttggttt tggtggattg gtttatcttc aatttatttt aatctaaact atttagtgcc
     6841 aattatacca attatcattg gttttattta tggactactt tttagattat gttatttatt
     6901 aaaatttgat tttttaaggc tttgtggaat tttttgcata agttttatcc atcctttagg
     6961 atttgattgg cttaattggg gaatttttac agtttatggt ttttttgacc caagttatcg
     7021 tggtattatt tgcatatttt taatagcata tttcatctat gagggttata tatcaagata
     7081 ttataaaata gcgattgttc ttattttatt ctttagtgga tttcaatata atgaaaaaca
     7141 agctcaaact cttaatttaa actataaact catcaatact aatatctctc aagatcaaaa
     7201 atttttacaa gaaaatttaa aatcaaattc tgatatctta attcaagata tacttcaagc
     7261 tataaatgaa aaaaaagaac ttgtaatctt gcctgaaacc gcttttgctt ttgatttaaa
     7321 aaataccaaa tacgagctta tacttaaaga attatcttat aaaatcacca ttattacagg
     7381 agcatttcat gttgaaaaag agcatactta taatagcact tatatcttta aaaaaggcaa
     7441 tgtctatatt ttaaataagc attttttagt tccctttggt gaagaaattc cattttttaa
     7501 agacttaaca aaaaaatatt ttcttaaaaa tattgaagaa ttttccaaag gtcctataca
     7561 aagcaaatat aaattagata atcaaattat cacaaatgca atttgttatg aagctaccaa
     7621 agaacaaaac tatcaaaatt cacaaattat tatagcccta agcaacaatg cttggtttaa
     7681 taatagcagc gaatacaaac tccagcaact cttaatgaaa ttttatgcaa gtaaatatgg
     7741 ggttagtgtt tatcatgcta caaatggcaa agagaatata gttatactcc ctaaaaagct
     7801 tttaagtaaa gattggaaaa atttatccaa agaaatattt aatgataaaa aataatatta
     7861 aaattttaat tttaaagtaa tttaagttat tttatattat aattctgtca aacaatattt
     7921 tgacttagag gggtttttac cccaaaagct aaattaattt agcttccttc ctaactttta
     7981 tatttatgag ggatattgaa aaatatccct ctaagtcaaa aattaatata acctcattaa
     8041 ttctttataa ttatacaagc cttatttaag cttgtataat attgttaatt ttttaaagta
     8101 gctttttaaa ctgttctaga gcatcaagtt tttcccaagg atagtccttt tgtcctactt
     8161 gcccacgagc tgctacatcc gcataaagaa aagtttcttt acttggttta tccagatgaa
     8221 atttatcacg aatccaattt ggtgttaaag agaaattttg cataacaaaa tcacttaaaa
     8281 catcgtcatt tacactagta tttgtgccca tacaatccac gcttaccgaa gtaggttttg
     8341 caacacctat agcatagcta agttgaacaa tacatttttt agcaagccct gctgcaacta
     8401 tgtttttagc tagccatcta cctgcataaa gtccacttct atcaacctta gtataatctt
     8461 tgctcgattg tgcgccacca cctattggag aataacctcc aaaactatct actataagct
     8521 ttcttcctgt taaaccacta tcatgcaaag aagaatgatt aacatattta ccggttggat
     8581 taattaaaat tctagtttta ttaggatcaa aaagttcttt tggtaaatta ctatctaaga
     8641 taagtttcat caccaaagat cttaaatctt ctattttcat actttcaaca caaggtgcag
     8701 aaactactat agtatggata ctttgcggtt cgcaattttc aaaattcgcc ttagtaccat
     8761 aatcaatagt tacttgagtt ttaatatcta ctccaagttc atgtggattt gcttttgcat
     8821 aagcataaac tctatcgcat agcattcttg cataactaat agctgctggc atgtattctt
     8881 cagcttcgca acttgcaaaa ccaaacataa taccttgatc acctgctcct gtttcgccat
     8941 cttcttgatc gacaccttga ttgatatcag ggctttgttc atttaaaaac accataacat
     9001 caacttcatc aggatgcaaa cactgctctt tactaaaatg ccctgctccg tcataaccaa
     9061 tgttttttaa aacatcttta actaaattat cgtaatcagc tttactaagc ttgtgatttg
     9121 acttaacttc gcctcctatc acaaccttat ttcctgcgac aaaaacctca ctcgccaccc
     9181 ttgaattttt gtcatttttc aagagtatat ccactatcgt atcagcgatt atatcagcgc
     9241 acttgtctgg atgacctgca cttacgactt ctgaagtgaa tagatacata aaaagtcctt
     9301 tcatttaaaa tgaaccacaa ttgtatccaa ataaacttat caaagcttga taaattaaaa
     9361 atttactaaa attaagcaaa agttagttaa aatcaacttc tgatataaaa aatatttaaa
     9421 aggtttttat gttttctaaa atcattcaaa gctacgctaa aggcaacctc atagttcaaa
     9481 tttgtatagg tatagtacta ggaatactca taggcattag ctctaaagaa atatctgaaa
     9541 ttgcaaattt actcggaata ctttttacaa gtgccttaaa agctatcgct cctatgcttg
     9601 tttttatttt aattttaacc tcaatttgca ctaaagattt ttctcaaagt ggtgctaaga
     9661 tcaaaaatat tattattttg tatatagtag gcacctttct tgcttcagct tgtgcggttc
     9721 ttgctaattt tttcttccct gtaaagcttg ttttagatgg agttcaaacc gctacaaact
     9781 catctccaac ccacatgagt gagattttca aagatctttt atttaaaatt gtcgataatc
     9841 ctataaatgc tctatcaagt ggaaattatt taggaatttt aacttgggca atagccggag
     9901 gtatagcatt aaaacactgt tctaacgaag caaaacaagt ttttatagat atcaatgaag
     9961 gggttttaaa aattgttaaa tttatagtaa aacttgctcc ttttggaatt tttggacttg
    10021 tggctaattc tgtagcacaa acaggagcgc aaggtttact aagttatgta aaacttttaa
    10081 ttttacttgt aactactatg ctttttgtta cttttgttat taatgcctta atagtctttt
    10141 tttatacaag aaaaaatcct tttcctttga tttttatctg cttaaggcac agtgcatttt
    10201 ttgctttttt tacaagaagt tcggcagcaa atattcctgt aaatatggca ctttgtgcca
    10261 aacttggcat agataaagaa ttttatggca tttctatacc tttaggagct actatcaaca
    10321 tggcaggagc ggcagttact atagctattt taagccttac tgcagccaat accgttggta
    10381 tagaaatcag tcttttacaa gcctttttat taagcattat tgctaccttt gcagcttgtg
    10441 gggctagcgg agttgcgggc ggatctttac tgcttatacc tttggcttgt tctttattta
    10501 atatagacta tgatattgct atgaaggtag ttgccatagg ttttattata ggggttattc
    10561 aagatagtgt tgaaactgct ttaaatagtt ctacagatgt tctttttaca gcaatttgtt
    10621 ctaaaaatga attaaattac aatatcaaat aaggtaaaaa catgcgtcat ctcatcacta
    10681 caaaagattt taataaagtc gaaattatgg agctttttaa agaagcaagt gatttcttag
    10741 atgaaaaacc tagaactttt cttaaaggaa aaagtatcac gacaattttt tttgaaaact
    10801 ctacacgcac cctttcatct tttgaaagcg ctgcaagaag attaggcgct agggttttac
    10861 gccttgatgt ttcaagatca agctctagca aaggagaaac tctttatgat actgctgcta
    10921 atttagatgc catgagtcct aatgctattg ttgtaagaca cgcaaactca ggagttccct
    10981 tgatattagc aaagcatata cattgtccag ttgttaatgg aggagatgga aaacacgccc
    11041 atcctactca agctttgcta gatttattta ctatttataa tcattttcaa ggtgatgtcg
    11101 aaggtaagaa aatttgcatc gtaggtgata ttaaaaattc ccgcgttgca gcgtctaata
    11161 tagaactttt aagcagattt aatcttgata ttaccctagt agctccaccg cattttatgc
    11221 ctaataccca tcttaaaaaa cattataagc ttgatgagaa tatcatagca aattcagata
    11281 ttatcatgag tcttagaaca caaacagaaa gacataataa aaccgtttac gcttcactta
    11341 aagactatgc aaatgatttt tgtattcaaa aaagcttagt aaaagataaa aagcttattt
    11401 tactacatcc aggccctgta aatcgcaata ttgacataag cgatgaaatg atgagcgatg
    11461 aaagaacttt agttttaaaa caagttaaaa atggagtggc cattagaatg gctgctctta
    11521 aaaaactcat attagaaaat gaaggataaa aaatgttaga atgggattta agtgctttat
    11581 tccacgataa agaagcatta caaaatttta cacaagatca aatccaacaa agtttaaatt
    11641 tcaaaaaaaa ctatgaaaat aaactttatg cattaaatgc taatgagttt ttacaagctt
    11701 taaaagatta tgaaaattta aatcaagccc ttggcaaaat catgacttat gcttatttac
    11761 tttttgctaa aaacactcaa aatggttctt tttatgcaca atacgaagaa gaatgcaaaa
    11821 aaatagaaga aaatttactc tttttcgagc ttgaattttg cgagttagct cctgagaaaa
    11881 gtcaagaatt tacaactttt tgcaaagatt atgattttta tctttctaat ttattgcaaa
    11941 acaaacgcta taatcttagc aaaaacgaag aacgcattat gctctatctt tcaaatacag
    12001 gtgcaaatgc ttttagtaga ctttttgatg aaagtatgag tgctttaaag atcccttttg
    12061 aaggtaaaaa acttagcgaa gaagaaattc taagcaaaat gtatgatgaa gatagaaaaa
    12121 cacgcaaaaa agctgctaaa aaattcagta aagttttgca aaaaaatagc agacttttaa
    12181 gttttattat caatatgata aaaacagaaa gaaaaaatat aagcttatta agaggttatg
    12241 aaaatgctga aatttcaaga catatcagta atcaaatttc acaaaaaagc gttgattctt
    12301 tgatagcaag cgcacaaaaa cattttaact tagtatcgca attttacaaa agaaaaaaac
    12361 aaattttagg ctatgatgag cttaaagact acgacagata tgcacccata ggaaaagaag
    12421 caagttttga ttttaaaaca agtaaaaata ttgttttaga ggcatttcaa gctttttctc
    12481 cgcaatttta tgatatagca aaaaatgctt ttaatcaagg ctggattgat gtttatccac
    12541 aagaaaataa acaagggggt gctttttcac attctgcaac ttctgatgcg catccttttg
    12601 ttttattaaa ctacaccgat aaaaggcgtg atctttttac acttgcacat gaattaggac
    12661 atactatcca tcaaaaactt tcttacaatg taagctactt aaatcaaaac acacctttaa
    12721 ccaccgcaga aacagcttca gtttttgctg aaatgctggt atttgatttt attaaagata
    12781 agttaaaaaa agaagaactc ctatctttat atgcaaataa aatcgaagat atttttgcaa
    12841 ctttttatag acaaattaat tttacttgtt ttgaaagacg cttacatgct caagaaaatg
    12901 aacttagcac cgaagaaatc aataaaattt ggatggaaga atctcaaaag atgtttcaag
    12961 acagcgtaaa acttacaaaa aattatgctt cttggtggag ttatattcct cattttatcc
    13021 attctccttt ttactgctat gcttatgctt atgcacaact tttagtttta gctctttatg
    13081 gactttacaa aagtaaaaaa tgtgaaaatt ttaaagaact ttatatcaaa atgctttctt
    13141 taggtggaag cgtgagtcca aaagaactag taggaatgtt tggctttgat atagaagatg
    13201 aaaatttttg ggaaataggc ataaaagaaa ttcaaaaact catcaatgaa tttatggagt
    13261 tacaatcatg ctagaaacaa tcttaaaaaa tgaaaatttt atccatacca tgcaaaagca
    13321 ttgttatgaa gttatttcac accttataga agaaaatata gaattttcca tagttgcaaa
    13381 tacaaatttc atagatttta accctgaact tcccaaagag cttgatgtta aacaaaatcc
    13441 ttatgctctt tttgctcttg gaggatacac ctttgaatcc atacaactaa ataaagattt
    13501 cattcaattt cacgcaggtt ttggaaatga tgattttgat agttttgtaa aggttgattt
    13561 aggagctatc acgcaaattc aaatagaaaa taacatttta tttgttaatt ttagccttta
    13621 taaacgcgaa gatagtaaaa atttacaaaa atctaaaaat atatttttaa ataatccaaa
    13681 aaataaagat attttcaaaa aatgaatcta tttgaagatt taaatgatag tcaaaaacag
    13741 gcagtaagcc acattgatgg agctatgctt atcctagcgg gtgcaggtag tggaaaaacc
    13801 aaaactatta ccactcgtct tgcttatctt atcggtgaag taggcatccc ctcgcataac
    13861 actcttactc ttacttttac aaataaagca gctagtgtta tgcgtcatag agcattaaat
    13921 tttctacaag gcaatcacaa tcccttgctt tgcacctttc ataaatttgg acttttattt
    13981 ttaaaactcc attttgaaag attggagcgt aaaaatagtt ttattgttat cgatacagat
    14041 gatacaaaaa aaataattaa agacttaatc catgataaaa acaaagataa tgtctatgat
    14101 attatcaaat acatatctta ttgcaaaaat gaaggcaaaa gagtaagcaa tgtctttgaa
    14161 gatttaaatt tactaaaaga acataatttt gaaaaatatc aaaatgaata caaatttgcc
    14221 aactattacc gtgcttatga agaatactta ttaaagcaaa attttgtaga ttttgatgat
    14281 cttttattgc taagcaatct cattttagaa aatgatataa attttgccaa agaacaaagc
    14341 ttactttata attacattac agttgatgag tatcaagata ctaatacctt gcaatataaa
    14401 attctaaaaa atctatgttg tatgcatgaa aatatcacag ttgttggtga tgatgatcaa
    14461 agtatttata gttggcgtgg agcaaaaatt gaaaatattt taaattttca aaacgatttt
    14521 aaaaatgtta aacttgtaaa acttgaacaa aactatcgtt cagtagggac tattttacaa
    14581 gcagcaaata atctcatatc tcacaatgag caacgacttg gaaaaacttt aatctgcact
    14641 aaagatactg gggaaaatat taaaatatta aaaaacgaaa acgaaaaaga tgaaggttta
    14701 tatatcgctc aagaagtgaa aaaattgcta aattctggag tagaagctaa agagatcgcc
    14761 gttttatttc gagttaatgc actatcaaga gcaatagaag aagcatttat gaaggaaaaa
    14821 atttcttata aactgcttag cggtatgcgt ttttatgaga gattagaaat aaaagattta
    14881 atctcgtatc ttagacttat cttaaatcca aatgatgatt tgtcgtttag gcgtattatt
    14941 aatcgcccta aaagatccat aggagaaaaa gccctaaaaa atttagaaga atatgcaaaa
    15001 aaacgtcaaa tttcactttt tgatgcctta tgtgaaagcg atggcggtgt aggaatttta
    15061 acaacaaaaa aagcacaaaa tgaagcaaat atttttatac aaaatattca cactctaaaa
    15121 agctacgata atgcaaaaaa agtttttgac aatatagaag aattatttaa aatcaaagat
    15181 tatttttcag agcaagatga tggagatgaa agaatcagaa atcttgatga gttttatgct
    15241 aatctaagag aaaaactcaa agaagatccc gaagcttctt tagaagatct acttagtgaa
    15301 atttctttat taagtgatca agataattta gatgaagaat gtgtttgctt gatgagtatt
    15361 catgctagca aaggtttgga atttgattat gtttttataa taggctttga tgaaggattt
    15421 tttcctttaa atagcgaaga aaatctcgaa gaagaacgcc gtcttgctta tgttgccatc
    15481 actcgcgcca agaaatttct cacaataagt gttgcaaatt ctcgttttta tcatggttca
    15541 agagcaaata tcaatcctag tcgcttctta gaagaaagta aattaatcaa tgaaaaatca
    15601 aaaaatcaaa atatacaaaa aactagtttt tgcaaaggag atctagttaa acataaaatt
    15661 tttggcattg gcagggttgt tgaagttaat aaaagcggaa aagaggaaaa gcttaatatt
    15721 aattttggtg gtataatgcg tgtaatcatg gcaagctttg tggaaaaagc agtatgaata
    15781 agatctttgc agcctttaaa ccaagaggtt tgagttctaa tgccttttta agtactttaa
    15841 agaaaaaata taaaaataaa aaagcaggat attctggcac tcttgatcct ttcgccaaag
    15901 gggttttaat cgttgcgttt ggacaataca caaaactttt ccgattttta aaaaaaactc
    15961 caaaaaccta taaagctact ttatggcttg gagtttactc cttaagtctt gatgatcaaa
    16021 atataaaaga aattaaaaat ataaaagaat ttgatcttgc aaatttacaa caaatcattg
    16081 atcaaatgca aggaattatc tcctatacac cgccgcaatt tagcgccaaa agaatcaatg
    16141 gaactcgcgc ctatgaactt gcaaaaaaag gtatagaagc aaatttaaaa ccttgccaaa
    16201 tggaagtatt tgattgcaag attttaagct ataatcatcc ttttttaaat atcgaaatca
    16261 cagtcagtga aggtgcttat ataagatctt attgcgaact ttttgctaga aaactaggta
    16321 ttaatgcgac tttaagctct ttagagcgca ttaaagaagg caaatttgtt tataataatg
    16381 agaaaagctt aaatgtgtta aaatacatta acctaaagcc aaattttatc aaggatttaa
    16441 ataaactcga aaatggtgct aaaatttttg tcgaagaatt aaaatttcat gatgaaggag
    16501 attattatat tgaaacagaa aaatatttta gcataattaa tattaaagaa aatacagtaa
    16561 aatatcttct aaataaggtt gaaaaatgtt aatattatca agaaaagaaa atgaaagtat
    16621 aattatcgga gaaggtatag aaatcaaagt cgttcaaaca gggaaaggat atgccaaaat
    16681 aggcatagaa gctccaaaat cccttatgat acttagaaaa gaacttgttc aacaagtaaa
    16741 ggatgaaaat ttgcattctg ttgttcagaa tgatattaaa cttgatgact taagcaaaaa
    16801 actaatcaaa tgaaagctta cgctaaagca aatatttttt taaaacttac cggttttgac
    16861 tcaagaaaat atcatctttt agaatcacga tttatacttt taaaagatct ttttgatgag
    16921 cttgagcttg ttgataaaga atcagactct aaaaaagaat ttgaaatcat tagtaatttt
    16981 aaatgcgaaa ataatattat tcaaaaggct tacttactac tttctaaaag atataacaac
    17041 gaattaaaag aattatttag caaaaaaagc ctaaaactca caaaaaatat cccagtatgt
    17101 gctggacttg gcggtggaag tagcgattgt gcgagttttt tactactaat gaatgaaacc
    17161 ctaaatttaa aattaaacct acaagaactt ataaatttaa gcatacaact aggaagcgat
    17221 attgcctttt ttttaagtgg ctttcactct gctaatgtaa gtggctgtgg cgaaattata
    17281 gaagaatttg aagatgacat acctaattta aaatggactt ttccacaaat atcttgccaa
    17341 actaaagctg tttatgatga atttgataga ggaatatttg actttcaaaa aaacaataat
    17401 caagcgcaaa tctacaaaaa actcagcaca aaagagttgt tacaaaattt taaaaacaaa
    17461 gaattaaatg atttatttac tccttgtgca actttatatc ctaaaatgaa gtcttactta
    17521 caagaagatt tttttctaag cggtagcggt agtagtgttt ttaaggttga tcgatgaaaa
    17581 ttattgcgag aaataaaaaa gctttatttg attatagcat catagaacgc tttgaagccg
    17641 gaattgtcct taaaggaagt gaagttgtag ccttaagagc aggaagagca aatcttaaag
    17701 actcttttgt tcgcattata aaaaatgaga tttttttact taattctcat atttcattgc
    17761 ttcatactac acattctttc tataaacacg aagaaagagg tgctagaaag cttttaatgc
    17821 atagaaagca aattgataaa ttattaggta aagtaagtat agaaggatat actattgttg
    17881 cattagatct ttattttaac acaaaaaata aagtaaaagc cactcttgct ttagctaaag
    17941 ggaaaaattt gcacgacaag cgtgaaactt taaagaaaaa gcaagccgat ttagaagcta
    18001 gagctgctat gaaaaattat aaataaagga aattaaatga aaaaaatttt aaccctattt
    18061 ttaataagtt tagcattttt tcttaatgct tgctccaaag aagaagaaat tcaaaatgat
    18121 tttatgtttg aagagtatca caaaggagat aaaatagtat taaatagtgt aaatggtgga
    18181 agcaaaactt taataagaac agataaaggt tttgtggtag aaggagagga aggaaaagtt
    18241 ctaatgtttg atttttttgg cactttttgc accccatgca aagaagaagc tttagatctt
    18301 agcaaacttt ggaaaaataa ttctagcaaa tttatcatta taggacttac acattttgaa
    18361 gatgttagcg atgaaacagt taaaaaattc gcggatgatt atggtgctta ctattttcta
    18421 agcaatggcg gttctaatga tcgtattatt gctcaaattt taaaagatat agactatcaa
    18481 aatatggagc aacttccttt taaagttgtt ttaaaaaatg gaatttatca aaaaataagc
    18541 gattactgga ataataatgc tccaacaaat ttttatcttg gcaaaattcc aacagaactc
    18601 atgcaagaag atttaaataa aatctacaaa ggaaaataat gccaaaaacc caaactctag
    18661 agcagacaaa acttagtgaa ccaaaaatgt ataaagttat actcttaaat gatgatgtaa
    18721 caaccatgga ttttgttata gaaattttga tgaatatttt tcatcaaaac cttgaaaaag
    18781 caagtcaaac aatgttagaa attcatcaca acggttctgg aatttgtggc atttacactc
    18841 aagaaatagc tctttcaaaa caaaaaaaag ttatagatgc ggctaaactt gctaattttc
    18901 cactacaagc aaaggtagaa gaagaatgaa ataccaagaa aatttacaaa aatatcttga
    18961 taatgccaaa aatctaagct taataaacca ccatgaattt gttacctgtg agcatgtact
    19021 gtttgcatta ctaaaactaa gcattgattt taaggatata tttgaagaat tttcagatgg
    19081 agatcttgaa cttctagaaa ctgaattaaa aaattacatt tctcaaaaca atcaagttat
    19141 taaacaagaa atagaaccta caatatctgt tgttttagat gaaatcttac tttcatctaa
    19201 aaataaaaat aatgaaatta aaattataga ttttttagaa aagctcatac aggattcaag
    19261 aagttattct agctatctct taaaaaaaca caacataaat cttaccaaaa ttcaagaact
    19321 tcaaaatcat gaaaatatac aaaatttaag caaccacaca agtaatttaa cacttttggc
    19381 tcaaaatggc aagattgatc ctttaatagg aagaaaattt gaacttgaaa gaatgatgca
    19441 aattctttca cgtcgcaaga aaaataatcc tattttagta ggagaagcag gagttggcaa
    19501 aacggccatt gtagaaggat tagcattggc tattgcggaa aaaaaggtgc ctaaaaactt
    19561 acaaaatgca aaaattttta gtcttgatat ggctagtata cttgcgggaa caaaataccg
    19621 tggagatttt gagaaaagaa ttaaagaaat tttaaatgaa cttgagaaaa tacccaatgc
    19681 tattttattt attgatgaaa ttcacactat agtaggagct ggaagcacag gagaatctca
    19741 tactgatttt tccaatcttt taaaaccagc tctaagtaat ggaactttaa aatgcatagg
    19801 tgcaacaact tttatggaat ataaaaatac ttttgataaa aataaacctc taagtcgccg
    19861 ttttgctaaa ataaatgtag atgaaccaag ccaagaagaa agtttgcaaa ttcttaaagg
    19921 attaaaaaac aaatatgaag aatttcatca tataaaatta aacgatgaaa ttcttcaata
    19981 tgctgtaatt tggggtaaaa aattttttaa tgataaattt ttacctgatt gcgctataga
    20041 tctgatcgat gaacttggcg cttcttttgc tttaaatcca aaagctaaaa aaaatgcaaa
    20101 tttaaaagat ttagaaaatg ttttagcaaa aatgacccac catcacaaaa tgtttgaatt
    20161 cgatcaaaat aaagctttaa tgaatttaaa aacaaattta aaagcaaaaa tttttggcca
    20221 agatgaagtt atagatagcc ttgtttcatc acttaagcaa agtttcgcag gatttaaaaa
    20281 ttccaataca ccacgcggag tgtttttgtt tactggatca agtggagttg gaaaaacaga
    20341 attttgcaaa gctttagctg aatttttagg tttaaattta gagcgctttg atatgagcga
    20401 atatgcagaa aaacatgcta taagtaaact aataggatct ccagctggat atataggttt
    20461 tgaagagggt ggacttttaa gcaatgctat tcgcaaaaat cctttcagtc ttgttctttt
    20521 tgatgaaata gaaaaggctc atcctgattt aagcaatacc tttttacaga tttttgacaa
    20581 tgctgaactc accgacaata gcggtcttaa agtagatttt aaaaatacaa tcattattat
    20641 gacatctaat ctaggactta aagaaagcaa tgagcttggt tttttaagta aaaatgaaga
    20701 aaaaagtaat cgtgctatca aagatttttt tgctccagaa tttattaatc gcattgataa
    20761 aattttacat tttaatgatt taaacgatgc tatacttgtt aaaattatcg aaaaagaact
    20821 tgatgaaatt tctaaaaatt taaataatat aaaattatca gtggatgata aagtcaaaat
    20881 ttatttagct aaaaaagcct ataataaaga atttggagta aggcttttaa aacgcataat
    20941 ttctgaggaa ataggagaaa aaatcagtga tgaaatttta ttcgggaagc ttaaaaaagg
    21001 cggtatagct aaaatcaaac ttggtaaaaa tggaaagctc gaatttatat tctaaattac
    21061 tcaatgcacc taaaaatgct cctgtatttt taagtcaaaa tttagaagct gattttattg
    21121 taaaagctta tacttttggt ctattcccat ggacaagtaa acctgtaact tggtggtgtc
    21181 cagatcctag atgcatttta attccaaatc aaattcacat ccaaaaaaat atgaaaaaat
    21241 ttattaatct ctatcaaatt aaacttgatt atgatttttt aaaattaatt acattatgtc
    21301 gcgatacacg ctctcaaagc tggatagatg atgaatttat taccacttat tataagttat
    21361 ttacccaagg ctatgcgcat agccttgaac tttatgaaaa taatgaactt ataggtggaa
    21421 tttatggttt aattttaggc aaggttttct ttggtgaaag catggtaagc attaaaaaaa
    21481 atgcatctaa agttgccatg attaaacttt gtgatttatt aaaaccttat gattttatca
    21541 tagattgtca agtttataac caacatttag aatttatggg tgctcataat atttctagga
    21601 aagaattttt aaatatttta aaagaaaaat gcaatcaaga aagtggtttt aaaaatttta
    21661 aagatttaat tacttaaaaa ataagcgtga aaatcacgct tatgacattg ctttagcaac
    21721 ttcagcagag ctttcacgaa ttttctccat acattctctt gcttcttttg caagttcaac
    21781 actctgatta acatcctcta aaccgctttt aatactctca accacttgtg atgtaacatt
    21841 acgaatagaa ttaatcgtag tggtaatttc attaactgaa tgccctgttc tttcagctaa
    21901 atttcttact tcatcagcaa caacagcaaa acctctacca tgttcaccag cacgtgctgc
    21961 ctcaatagca gcatttaaag caagcagatt agtctgatca gcaatatcac taatagtctg
    22021 aataatagat ttaatttcat ctgattgttg atttaatgag gaaacaagat ttgaactttg
    22081 agacatcata tcagcaatat tctgaacatt tgaaacagtg ttttcaatta cacgatctcc
    22141 atcttgagta agattatcat ttttttctgc aagttcgctt atgaggcgaa gtttttcttg
    22201 atctttttta acttgttcgc ttatatctgt agcaaattta ataaccttgt aaatttttcc
    22261 atcatcattt ttaaccggat tataacttgc ttcaaggtat acttttttat tatttcttcc
    22321 gtatcttata tatttacctg attgaaattt gccctctctt aaatcttccc aaaattgaac
    22381 atagtcctta gagtgtctat aattagaatc acagaacata ctatgatgct ttcctttaat
    22441 ctcatcaata ttaaaatcca tagttcttaa aaaattttca ttagccgtaa taatagtccc
    22501 atcaggttta aattcaataa tagccataga acgattagca gcagcaatag tatttctaag
    22561 atcaagcatt tcataatgtc tttgagttat atcattggca aatttaataa ttttataaac
    22621 atgaccatta ttatcactaa ttggaagata atttgcttct aaataaacat ctatccctcc
    22681 cttagctata cgtctaaaaa gaccacttct ggcttttcca tctcttaaat ctttccaaaa
    22741 atcactatat gccgaagaat taacaacttc aggcaaacaa aacatactat gatgcttgcc
    22801 cttgatctct gaaagggagt atttcatagt tgttaaaaaa ttttgatttg cctctaaaat
    22861 aacgccatcg gtggtaaatt caattaccgc catggtattc ccaatagatc ttaaaatatc
    22921 tcctaaacca ttacactttt tttcaagttg ttcaattatt tcagtattat ttttcttagc
    22981 accaaacata aaactcacct ttttaataat aaattatttt aaaattatat catatttata
    23041 tagtattatt tacttaaaat tatattaatt tataagttaa atatatcctt taaacctaca
    23101 ataatcatct taaaccccat agcagcaata aatacttgtg ctatacgaga aaaaacatgt
    23161 aaaatcaatt ttccaactat tttttctata gtagctgcaa aatgaaaaag tataaacata
    23221 aaaataaaag ctatcattac tccgccaaga gcaacatcaa gcccaccatc ttcggctata
    23281 acgataacac tagctaaagt tccaggccca acaagcatag gaaatgccat aggtattaaa
    23341 ctctgtctta aaatttcctt atcatccata tcctgataag aactaaaatc cttagttgca
    23401 atttttgttg aaaaaagtaa atttttaata gccattataa taagaaccaa accaccagaa
    23461 acccttaaat catctaatga aaccctaaaa atatagttca taaacaaagg tcctgataat
    23521 aaaaatacca aaactatagt aaaagctgta tagagaatag ttctaaaaag tttttttcga
    23581 agcattaaag gcaatccatc actcatagcc aaaaattgag ttaaattacc aaaaggattt
    23641 aatatggcaa gtaaagtaat tgcagcaaaa aacatcaaat aaagctcaga acccatacta
    23701 gaaaacacta tcaatcctta gtttttacaa attccaaaga aatagaattt acacaatgtc
    23761 ttacattttt agcagaaaat ccttctcctt caaaaacatg acctaaatgt ccattgcagt
    23821 ttgcacatac aatctcggtt ctaatcccat ctttatcagg aattctttta acagcccctt
    23881 ttatttcatc atcaaagcta ggccacccac aacctgattt aaatttatct tcggatttat
    23941 aaagcgaagc tccacattgc ttgcattgat agattccttt ttcataaaaa tcattatatt
    24001 tcccactaaa aggagcttct gttcctttat ttaaaattac ttttttttct tcttcattta
    24061 attctttcat gatctaccct tgtaaaataa tttttatatt atataattaa aatttcaatt
    24121 ttaaatgata aatttttata attttcaaga aagttttaaa tgcaaaaaga
//
LOCUS       DARBAC010000011        24128 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.011, whole genome shotgun sequence.
ACCESSION   DARBAC010000011 DARBAC010000000
VERSION     DARBAC010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24128
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.011"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            50..292
                     /locus_tag="SB799_000314"
     CDS             50..292
                     /locus_tag="SB799_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867581.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            289..1590
                     /gene="miaB"
                     /locus_tag="SB799_000315"
     CDS             289..1590
                     /gene="miaB"
                     /locus_tag="SB799_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEG0867582.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFEETMDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEETASRRLSTLQNRHSEILDEIVKKQENKTFKVLFEELRAGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            1574..2203
                     /locus_tag="SB799_000316"
     CDS             1574..2203
                     /locus_tag="SB799_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEG0867583.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKASVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWEFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMEQFDKINLADQFKE"
     gene            2205..3164
                     /locus_tag="SB799_000317"
     CDS             2205..3164
                     /locus_tag="SB799_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HEG0867584.1"
                     /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFD
                     KSENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILFNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNIQKEKQPDDQILLYGFKQGHLL
                     AIIVAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNNKF
                     DLLDQENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGIL
                     LYSESDINISAIDFLESETFLEIKTKQINTLDLMIELMQKELK"
     gene            3161..3688
                     /locus_tag="SB799_000318"
     CDS             3161..3688
                     /locus_tag="SB799_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867585.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            3678..4196
                     /locus_tag="SB799_000319"
     CDS             3678..4196
                     /locus_tag="SB799_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867586.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNV
                     KIQETKPKKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(4188..5480)
                     /gene="thiC"
                     /locus_tag="SB799_000320"
     CDS             complement(4188..5480)
                     /gene="thiC"
                     /locus_tag="SB799_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEG0867587.1"
                     /translation="MKTQMNYAKEGVFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQIGAKDFLDVVYHHAKSGVDFMTI
                     HAGINSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDGAQISELIELSLLTQRAWDVGVQVMIEGPGHMAINEIEVN
                     MQLEKRLCKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(5537..5641)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(5663..6424)
                     /locus_tag="SB799_000321"
     CDS             complement(5663..6424)
                     /locus_tag="SB799_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEG0867588.1"
                     /translation="MSSQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPENITELTGITYEMVENAPSLAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENTHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTARIKQK"
     gene            complement(6421..7068)
                     /gene="rpe"
                     /locus_tag="SB799_000322"
     CDS             complement(6421..7068)
                     /gene="rpe"
                     /locus_tag="SB799_000322"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEG0867589.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            7208..7402
                     /locus_tag="SB799_000323"
     CDS             7208..7402
                     /locus_tag="SB799_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEG0867590.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            7587..7802
                     /locus_tag="SB799_000324"
     CDS             7587..7802
                     /locus_tag="SB799_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEG0867591.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            7812..8909
                     /locus_tag="SB799_000325"
     CDS             7812..8909
                     /locus_tag="SB799_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HEG0867592.1"
                     /translation="MFGSKINHSDLQKLEEENKNLAHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIVQGDMLENVNKAEVISSYSKTSLAEMDELNHIA
                     NSINASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(8951..9538)
                     /locus_tag="SB799_000326"
     CDS             complement(8951..9538)
                     /locus_tag="SB799_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEG0867593.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGKFCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDNMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFAEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNIIRTPLLDFAYMWFLKEKWEKY"
     gene            complement(9621..11675)
                     /locus_tag="SB799_000327"
     CDS             complement(9621..11675)
                     /locus_tag="SB799_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEG0867594.1"
                     /translation="MKFKKSLLCFLILSGALLKAEEKYQLNDVVVSASGFEQDLVDAP
                     ASISIITKEELEKKPIKDIGEAIGDIPGVDVTMNKTGTYDFSIRGFGSSYTLVLIDGK
                     RQSVANGFYDNGFSGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINIITKKNP
                     DKTEANIEFNTLLQQHSNHYGNAGGFNAYVATPLIEDTLSISARLKYYDKAASDLKWP
                     TPVWNNSQQRPDNYQIASHSPGAFTSLGFGSRLNWTVDDKNNIYFDIERYINEISVNS
                     TSSRAIKSERQLFKDNIVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLP
                     WNLGQYGNLVNTFGARIDYEMLKNDQASAGSQIRGKNLDQTTVALYGENEYFITDDLI
                     FTTGLRYIYSDLFDSEFTPRVYLVYHLNDNIAFKGGVSKGYKTPAAKELTNGYYNYSN
                     DNAYFGNPDLKPEESINYELGVDFRIFDFAHYSITGFITDFTNQISSEDLTGMQNGIN
                     CSNGTVCTRPINLGKTQTKGIEFAFNTKTYNGFSLNSSYTFMDNRYKDGQKNWFGGDR
                     IENLPRHIAMLKLNYERGKFSSYIKTRARLDTIAKAKGGGNGSLPWQKYKPFYIVDLG
                     INYKINKQSSLSFVVQNLFDKNFFDPQVTKWAGANPAGYANRYQDYTEGRSFWLSYKY
                     DF"
     gene            complement(11827..12765)
                     /locus_tag="SB799_000328"
     CDS             complement(11827..12765)
                     /locus_tag="SB799_000328"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEG0867595.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADRLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(12767..13981)
                     /locus_tag="SB799_000329"
     CDS             complement(12767..13981)
                     /locus_tag="SB799_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEG0867596.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFSEELDKEEFGIVS
                     AAGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVISVMALRDGVVPPTINQLVKDDECDLDYVPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(14007..14240)
                     /gene="acpP"
                     /locus_tag="SB799_000330"
     CDS             complement(14007..14240)
                     /gene="acpP"
                     /locus_tag="SB799_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0867597.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            14350..15018
                     /gene="tenA"
                     /locus_tag="SB799_000331"
     CDS             14350..15018
                     /gene="tenA"
                     /locus_tag="SB799_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEG0867598.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELNIK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVSAQKFQKLSEIFHTATRLEVAFWEHSLRM
                     ELNL"
     gene            complement(15042..15899)
                     /locus_tag="SB799_000332"
     CDS             complement(15042..15899)
                     /locus_tag="SB799_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HEG0867599.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERIN
                     TFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTSSKARLPMIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(15903..16868)
                     /locus_tag="SB799_000333"
     CDS             complement(15903..16868)
                     /locus_tag="SB799_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEG0867600.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMRAGKMNPMHVFGEDEIEGHKDLVKMIKAAQEAAVKE"
     gene            complement(16865..18700)
                     /locus_tag="SB799_000334"
     CDS             complement(16865..18700)
                     /locus_tag="SB799_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEG0867601.1"
                     /translation="MGEFSRRDFIKTACISVGALAASSSGVYALDDSSKMDKDTNLPS
                     CDVLVIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMDHELLDIGVMDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGYLLNNRGERFMKNYHEKLELAPRDVVARAIETEIREGRGY
                     GEGLGAYVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGIE
                     VAKFEDMSTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDAS
                     FGKGAKTHELAQKWQARFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLL
                     AKNLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHT
                     REDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
     gene            complement(19037..19447)
                     /locus_tag="SB799_000335"
     CDS             complement(19037..19447)
                     /locus_tag="SB799_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEG0867602.1"
                     /translation="MMDLKEIAQFLDDNVPAFLATLGTCGNPRVRPIQSPLLVRDKIY
                     FCTANTKGLFKHIKNYNGIEFCSCAKDGTFLRLRANAVFEPNLEVKKMMFEKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
     gene            complement(19454..20197)
                     /gene="fabG"
                     /locus_tag="SB799_000336"
     CDS             complement(19454..20197)
                     /gene="fabG"
                     /locus_tag="SB799_000336"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEG0867603.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELGYLVNNAGVTNDKLALRM
                     KLEDFSSVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            complement(20269..21747)
                     /locus_tag="SB799_000337"
     CDS             complement(20269..21747)
                     /locus_tag="SB799_000337"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEG0867604.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLQKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQAKGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            21827..22888
                     /locus_tag="SB799_000338"
     CDS             21827..22888
                     /locus_tag="SB799_000338"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEG0867605.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIVFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAII
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            22888..24096
                     /locus_tag="SB799_000339"
     CDS             22888..24096
                     /locus_tag="SB799_000339"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEG0867606.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDIMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVIGGNVGTPLAELDPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKRMNECDVVILPKIYANTPTKAHKISYKDEKDLA
                     VKFGIDTEKISFKSPFLLDAIMALAIEKILLDTLSYELLNSFVMEKNKLEELKDSQNR
                     LWVNDTKATNESAVMAALNRYKDKKIHLIIGGDDKGVDLSNLFDFMKNFNIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYVERG
                     KVFKECVNKI"
BASE COUNT         8336 a         4415 c         3263 g         8114 t
ORIGIN      
        1 aaatttgcta aaattataga ttaaaatgaa aattcttaag gatttagcta tggaattaaa
       61 attggcaaga actttgatta atgaaaaacc taaaaatatt agcctagaaa aaatcgaaga
      121 ggctatagaa aaagaaggac aaaagttttt ttattttgat aaagataata cacacaaaca
      181 actcattgcc cttgtaaatc attttgaaaa aaaaggagta agcatttatc atagaaccgt
      241 aaaatacgga cttgatgata atgattttat gtatgaggta catattcttt gagtgctaaa
      301 aaacttttta tccaaacttt aggttgtgcg atgaatgtca gagattctga gcatatgatc
      361 gcagaattaa cacaaaaaga aaattacgca ctaacagaag atatcaaaga agcagatctt
      421 attcttatca atacctgttc agtgcgtgaa aaacctgtgc ataaactttt ctcagaagtg
      481 ggtggctttg aaaaagttaa aaaagaaggt gctaaaatag gagtttgtgg atgcactgca
      541 tcacatttgg gaaatgaaat tttcaaacgt gctccttatg tggattttgt tctaggggca
      601 agaaatattt ccaaaatcac tcaagctata aaaactccaa aatttatggg ggtggacata
      661 gactatgatg aaagtgaatt tgcttttgca gattttagaa atagtattta taaatcctat
      721 attaatatct ccataggttg tgataaacac tgcacttatt gtatagtgcc acatactaga
      781 ggagatgaaa tttccatacc ttttaacatc atctacaaag aagctcaaaa agccgttgaa
      841 aaaggcgcta aagagatttt cttgctagga caaaatgtca ataactacgg caaaagattt
      901 agaaacgaac ataaaaaaat ggacttttca gatcttttag aagaacttag cactatagaa
      961 ggtttggaac gcattcgctt tacaagtcca catcctttgc acatggatga taaattttta
     1021 gaagtttttg ccaataatcc aaaagtttgc aaatccatgc atatgccttt acaaagcggt
     1081 tcaagtgaaa ttttaaaagc catgaaacgt ggctatacta aagaatggta tttaaataga
     1141 gctttaaaac ttagagaact ttgtccaaat gttagcattt ctacagacat tattgtagct
     1201 tttccagggg aaagtgaaaa agattttgaa gaaactatgg atgttttgga aaaagtgcgt
     1261 tttgaacaaa ttttttcttt taaatactcc aaacgccctt taacaaaagc cgcaaccatg
     1321 cctaatcaaa tcgatgaaga aacagcttca agaagactta gcaccttaca aaatcgtcat
     1381 agtgaaattt tagatgaaat tgtaaaaaaa caagaaaata aaacttttaa agttttattt
     1441 gaagaattaa gagcaggcaa tagcattgct ggaagaacag ataataattt tttagttcaa
     1501 gttgaaggta gcgaagaact tttagggcaa tttaaagaag taaaaatcac taatgcaaag
     1561 cgtatggttt tatatgggga aatcgtttaa aatccattgc ttaacatata taattttcat
     1621 cttgcaatgg cttatttttt taagctgtaa aaagcactat aaaggtgaaa aagttgaccg
     1681 taaagctagt gtgatacttt tttggcatgg aaaattagca ctcatgcctt ttgcgtttag
     1741 acattataga caaaaaaata aaaaagccta tgtcatgatc tcccaccata aagatggaga
     1801 acaaattgca aaaatcatca agcttttcgg tcttgatact gtaagaggaa gcacttcaag
     1861 gggtgctagc agtgcactta gagctgcatt taaagtttta gaacaaaatg acgatatagt
     1921 tatcacgcct gatggtccac gtgggcctta tcatagtatt tcagatggtt ctatcatttt
     1981 ggctcaaaaa aaagaactaa agataagaat tttaaactat gaagcaaatc gtttttggga
     2041 atttaaaagt tgggataaga tgatcttgcc aaaacctttt agtaagatta cttatagtct
     2101 aagtgaacct ttggatattt tatctttaga taaagaaaaa gctaaagaat ttctaatgga
     2161 acaatttgat aaaattaact tagctgatca atttaaggaa tgaaatgtta tttttactta
     2221 aaaaaatatt tccacaactt tttattagta ttattttaga agataaaaaa aatattgtaa
     2281 aagcttctat ttacagagga aataaactaa tcagtagcaa tgaaaaaact tttgataaaa
     2341 gtgaaaattt attagaatac ataaaaaatt taagcaagca tttcttattt taccacactg
     2401 ctttattttt agacgccaaa gaacaaggat taatacctag tacaaatatt caagattgtg
     2461 agcactttaa tataggaaaa atcagcttac agcatatttt atttaataat gcccttgttt
     2521 atacggctac cgaacatgtg gaatattata gcgagctttt tgaagaatat agaggtttag
     2581 attttttata ttcccctttt gcccttcttt actacaatat acaaaaagaa aaacagcctg
     2641 atgatcaaat tttactttat ggatttaaac aaggacatct tttggcaatt attgttgcta
     2701 aaggcaatac tattttatac ggtgatttta aaatatttga gcaagaatta ggtttagagc
     2761 ttgaacttcc atcagaagat aatcaagaaa ttgaaaacaa caacgatgat actgaagtta
     2821 ccttagataa cttcaatgaa gccttaaata ataaatttga tctacttgat caagaaaata
     2881 atcttgaaac tttggataat aatgataatt ttaatcttga tgaattaaat caatttagca
     2941 atgatatgga actttgccgt tatattatta cgagcattga aaaattttac aatgatgata
     3001 aatatgctgg ggtatttatc aatggtattt tattatatag cgaatcagat attaacataa
     3061 gtgctattga ttttttagaa agtgaaactt ttttagagat aaaaacgaaa caaatcaaca
     3121 ccttagatct tatgatagaa ttgatgcaaa aggagcttaa atgacttata gcttcataca
     3181 gccaagaaaa aaacctattt tcacactctt tgataaaatt tggctaggac tttttggttt
     3241 tagtatatta tttatcttgc tagtatattt tacatataca ataaaaattg cattaatcaa
     3301 tagctctatc gatgatgaaa aacaacaagt tatagtgctt caaaatcaaa ctaagcaaaa
     3361 tgaaatgctt tatgaaattt tatttgatca aagccaaata gcgaaaaatt ttaacactca
     3421 aaatcaaatt gttaaagaaa gcttaagaaa tctatttgat attattgtaa aaactgataa
     3481 tattactctt gaaagtgttg aacaagacga atattcctta aaacttatcg gagtcactcc
     3541 tacaagagaa atgtttactc tacttttaga aaccccttta aaaagcatct ttgatcaaag
     3601 ctatacaacc tattatcgct tagataatgg gtggtatcgt tttgttagta ttagtaaaca
     3661 aattccagga gttgcagatg aaagataaaa gtctagaaga aattgattta ttaaagctta
     3721 tcatttgcgc gttaagtttt ataagcgttt gcacagcctt gatcttattt ttacttttac
     3781 cgacattaaa aaactacaaa caagcaaatc ttagagaaaa ctcacaactt gctatcttaa
     3841 aagccgctaa atcaaaattt gactttagtg aagataaaat atcaactcta agaagcgaaa
     3901 acaacaaaag tttagagcaa tttgagcaaa attttaatat aggaaatttt gatatttttt
     3961 tacaaaaata ttttcaaaat gtaaaaattc aagaaactaa gcccaaaaaa caagaaaaat
     4021 atctaaaaaa ccgcttagcc attaaagcga caatgaacaa tcctagaaga ctttatgatt
     4081 ttattgatgc tctaaaaaac tataataatt taatcaagct tgattatcca cttaatctta
     4141 aagcaggaga gcaaggtatc tctatagatc ttactctcaa agtttattca agctaaactc
     4201 acatcttcgc cttttaaaat ttgattcata gtattcattg cacacatttt tccacacatg
     4261 gaacatgagt ttaaatcatc agggcgacgc tcattaaaca tttttttagc cttttctcca
     4321 tcaatagcaa gtttaaacat tttctcccaa tctatctctt gtctagcctt actcatctca
     4381 tcatctcttg ctctttcttt tggaagttta gctatatctc ccgcatgagc tgcaatttta
     4441 gtcgcaacta taccctctct aacatcttct aaatttggaa gtcttaagtg ttcagcaggt
     4501 gttacataac acagcatatc agcaccgcta gctgcagcca cagctcctcc aatagcacca
     4561 ctaatatgat cataccctgc accaatatct gttaccaaag gtcctaagac ataaaaaggc
     4621 gctcctttgc ataaacgctt ttctaattgc atatttacct ctatttcatt aatagccata
     4681 tgccctggac cttctatcat tacttgaacc ccaacatccc aagccctttg ggtaagaagc
     4741 gataattcta taagctctga aatttgcgcc ccatcacttg catcgtgagt agagccagga
     4801 cgcaaagcat cgcccaaaga taaagttaca tcgtatttta aacaaatgtc aagcaaatca
     4861 tcataatact caaaaaaagg attttcagca tctttcatca tcatccaagc ataaagcaca
     4921 gagcctcctc ttgaaactat atttgtaagt cttttacttt gtttaaaaat atgcgctgcg
     4981 cgagaattaa tacctgcatg aattgtcata aaatcaaccc cacttttagc atgatgatat
     5041 acaacatcta aaaagtcttt agcaccaatt tgttttaaat ctttttctaa aaatcctacc
     5101 gcatcatata caggaactgt tcctatcata gcttttgaaa cattaacaag ctcgtctcta
     5161 aaacgacttg ttttgccata attgcttaag tccataatcg cttctatgtc aaatttatga
     5221 gcgagctcta cttttttcat ttcctcgcta taatcaacgc aatcatttga aactcctaaa
     5281 tttacattaa ccttagtacg cagtccaaaa cctataccat ttggatcaag acttttatga
     5341 ttaatatttg cagggataat aattttaccg caagcaatat tttcaagcaa aaaatcttta
     5401 cttaaatttt ctttttgtgc aacaatctgc atttctttag taaaaacacc ttctttggca
     5461 taattcattt gagttttcat aaatttatcc tttaaaaaat ttggataaat gaagggtgag
     5521 tataaatttt taaagtattg aaatttataa atcttcccga cgctggcatt atccagatcc
     5581 ggttcggtct aagcttttag cttactctca gcctgttaca caagctcccg tcatttatgt
     5641 tttaattata cactttaaat atttattttt gctttatgcg tgcagttttt gtaaaattta
     5701 taagttcttc tgtagttttt atatgataag gaagttttcc aaggcaatat ttaaaaattt
     5761 cagcagctgc caaagcatca tctaaagccc tatgatgcgt attttccacg cccagaaatt
     5821 ctttcaaaac ctctagttta tattttggac tttctataca acattgtgca aattctatag
     5881 tgcaaatacg acgattaagc aaaatgccaa aaccacactc atttaaagcc ttagaaataa
     5941 aactataatc aaaacgcaca ttatgcgcta caaaaatact gtcttttaaa aaaagcctaa
     6001 aatcacttaa aacctttgct aaacttggag cattttccac catctcataa gtaatacccg
     6061 taagttcggt tatattttct ggaatttctt ttactttaac aaaactttga aagcgtccaa
     6121 tttctttaga attttgaatt tttactgctc caatttctaa aatttccccc ttacttacgc
     6181 cgccagtact ttctatatct actatacaaa aaatttcatc tttaattttt gttgtgcgtg
     6241 ttttaagggt aaaaatatta tctttattca aagttaagcc caaacccaaa agctcaaaag
     6301 tttccaaatc taaatcaaaa ttttttaatt cttcaacttt ggcaaactct tgcatcaccc
     6361 aatcataagg cttgctttgc ttatttaata tagaaataat ctgatcaatt tgctgtgaac
     6421 tcaaaattca agctttaaag atgaaattgc agttttataa tcattagaag aaaaaatata
     6481 acttccagcc accaaaatat cagctccgga ttcctctaaa tcgctagcat ttaaaccatt
     6541 aacaccacca tcaacctcta taaaaacttt agcatttttt ttatcaatca tttggcgcaa
     6601 ttctttgatt ttttcatgta ccaaaggtaa aaatttttgt ccaccaaatc caggattaac
     6661 actcattaaa agtaccatat ctacaaattc tagcatgtgt ttaatagaat caataggagt
     6721 gtgcggattt aaaacaatag caggatggat tccttgactt cttatatatt cacaaagtct
     6781 tataggatga acttcgcttt ccatatgaaa agaaatgaat tttggtttca aagggataaa
     6841 aagatctata aatttactta catctttaac catcaaatgc acatctaatg gcaacttact
     6901 aatagttgaa attttttcga tcacgcaagg tccaaaagtc aaatttggaa caaagtgtcc
     6961 atccattaca tcaatatgta aaagatctgc acctgcagct tcaatagctt taacttcttc
     7021 ttctaatttc aaaaaatttg cagacaataa acttggagct acatacatga tcaaaacctt
     7081 aaagtatata taaatgtgat aaataatatt ttatcgactt atatattaaa aaaactataa
     7141 attatggaat attttaagct taattttgat aaaatctcca tttaaaaatt ttcataagga
     7201 caagaaaatg gcaagagtat gtcaaatcac aggcaagggt ccaatggtgg gtaataatgt
     7261 cagccatgct aacaataaaa caaaaagacg ctttttacct aatctcagaa cagttcgtgt
     7321 aactttagaa gatggcacca cgagaaaaat gagaatcgca gcttctactc taagaactct
     7381 aaaaaaacaa aattctaaat aattttgagg atttattcct caattttaaa atttccaatt
     7441 taaaaataaa ctttaataaa tcacttatat aacacacatt taaaaattat tattaatttt
     7501 attatttttt aagccaaaaa tatcttttaa tagtgtaaaa taccttgtta aatgaatttt
     7561 aaatttcact aatacaagga gagtttatgc tacatgaata tagagaatta atgtcagagc
     7621 taaaaggtaa agatgctcat tttgataaac tatttgatcg tcataatgaa cttgatgaca
     7681 tgattaaaga tgcagaagaa ggtagaactt ctcttagcag catggaaatt tcaactttaa
     7741 aaaaagaaaa gcttcatgta aaagatgaac ttagccaata tctagcaaat tataaaaaat
     7801 aaggcaaaac aatgtttgga agtaaaataa accattctga tcttcaaaaa cttgaagaag
     7861 aaaataaaaa tcttgcacat aaaattgaaa aatttcaatc ggaaaattta gaattaaaaa
     7921 ataaaattac atcattagaa caagcggctt tagagtctaa acttaaaaca gatcttttaa
     7981 atgttttatt aactggggtt ttaaaaaata ttactattgt tcaaggcgat atgttagaaa
     8041 atgtaaataa ggcagaagtt atctctagct attctaaaac ttctcttgct gaaatggatg
     8101 aacttaacca tattgctaat tctatcaatg cttccttagg ggatattaca gaatcagcca
     8161 ataaaacaag agatgttgca ggaacattgc atagaagtgt agatgaaatt actaatgtaa
     8221 ttaatctaat taaagatgtt tccgatcaaa ccaatctttt agctcttaac gctgccatag
     8281 aagctgcacg cgcaggtgaa catgggcgtg gttttgctgt tgttgccgat gaagtaagaa
     8341 aactagctga aaaaacacaa aaagcaacca cagaagttga aatgaatatc aaccttctaa
     8401 agcaaaatgc aaatgaaatg tatactcaaa gtgagcaagt tgaaaaaatt tctatagatt
     8461 ctaatgctca tattatgagt ttttccgaaa aatttaccca cttagtaaat gaagcgcatt
     8521 ctactaattc aaatgcagtt ggtatcgctt cagaagcttt cgtatcttta gcaaaactag
     8581 atcatatagc ttttaaatta aatggttata aagaaatttt ttccaaatca ggaaagcaat
     8641 tagccgatca tacatcttgt cgcttaggaa aatggcttgc tagcacagga aaagaaagat
     8701 ttgggcaaaa taaaagcttc ttaaaaatta acgagccaca tgaaaaagtt catgaaaata
     8761 tgaataatgc tataacaata gcaaatacag aagatattag caaagatatt actcaacaca
     8821 gcataattaa taaatgcgaa gttgctgaaa atgcatcgct tgatcttttc aatgtattta
     8881 aagaaatgct tgatgaatca gatcattaaa tcctaggttg aaccttttta aggtttaacc
     8941 taaataatct ttaatatttt tcccacttct cctttaaaaa ccacatataa gcaaaatcaa
     9001 gcaaaggcgt tcttattata tttttacatt ttttttcaaa atcctgcacc ttaacataaa
     9061 cagcttcaat ctcttcatca tcaactccac ctcctgaaga aattttatct ttttcatcaa
     9121 cttctgcgaa ataaaagctt tgcttgctta cacctgaacc aaaccctgta taaaaatctc
     9181 ctattttttc taaattttta ggagcatatc ctagttcttc tatacattct tcttttgcta
     9241 tttcctctaa agataatttt ttatccacaa gcccagaaca aagctctata gtatagccca
     9301 tattatcatc ttttacataa tctttatcat gcatttgatg ataccaaagt ggtatacgaa
     9361 attggcgtac aaaaataaaa ctttctaatt ctttatgata caaaagcact gaaacactat
     9421 ctttagattc tataaaatcc caagtacaaa acttaccatt actttcataa gcaaatctct
     9481 taggcttaat ataatttgat ttttcaaaag aaagttcttt taaattttta aacgccataa
     9541 taaaaccttt tatttatttt tcacattgta ctttattttt gcttttttga aaatataaag
     9601 gtaattaaag ccttaaaaaa ttaaaaatca tatttataac tcaaccaaaa actccttcct
     9661 tctgtatagt cttgataacg atttgcatat ccagcaggat tggctccagc ccatttagta
     9721 acttgcggat caaagaaatt tttatcaaaa agattttgta ctacaaaact taagctagat
     9781 tgcttattga ttttataatt tatccctaaa tctactatat aaaaaggctt atatttttgc
     9841 catggcaaac taccattacc gccacctttt gctttggcta tagtatcaag tcttgctcgt
     9901 gtttttatat aggagctaaa tttacctcgc tcatagttta attttaacat tgctatatgc
     9961 cttggtaaat tctctattct atcaccacca aaccaatttt tttgaccatc tttgtagcga
    10021 ttatccataa aagtataact tgaatttagg ctaaagccat tgtaagtttt ggtattaaat
    10081 gcaaattcta tacctttagt ctgtgttttt ccaagattaa taggacgcgt acaaacagtg
    10141 ccattgctac aattaatacc attttgcata cctgttaaat cttcactact gatttgattt
    10201 gtaaaatcag taataaatcc tgtgatagaa taatgtgcaa aatcaaatat cctaaaatca
    10261 acacccaatt cataatttat actttcttct ggttttaagt cagggtttcc aaaataagca
    10321 ttgtcattgc tataattata atatccattt gtcaactcct tagcagcagg agttttatag
    10381 ccttttgaaa cacctccttt aaaggctata ttatcattta agtgataaac caaataaacc
    10441 ctaggcgtaa attcagaatc aaacaaatcg ctataaatat aacgcaaacc tgtagtaaaa
    10501 atcaaatcat ctgttataaa atactcattt tccccataaa gcgcaaccgt ggtttgatca
    10561 agatttttac ctcttatttg actacctgcg cttgcttgat cattttttaa catctcataa
    10621 tcaatccttg caccaaaggt atttactaaa ttaccatatt gacctaaatt ccaaggtaaa
    10681 acaaccttac cttctcctac ccaaatttgg ctatgcagct ccttatcctt agtgctacca
    10741 tattgtaaat atgagttagt tgaaccaaaa tcatagttac catcatgatt taaaacaata
    10801 ttatccttaa aaagttgtct ttcactttta atagccctac tacttgtaga attcactgaa
    10861 atttcattaa tatatcgttc tatatcaaaa tatatattat ttttatcatc tactgtccaa
    10921 ttaagcctag aaccaaaacc taaactagta aaagcacctg gactatggct agcaatttga
    10981 taattatcag gtctttgttg actattattc caaaccggtg taggccattt taaatcagaa
    11041 gctgccttat cataatactt caaccttgca gaaattgata atgtatcttc aatcaaagga
    11101 gttgctacat aagcattaaa tcccccagca ttgccatagt gattagagtg ctgttgcaaa
    11161 agagtgttaa attctatatt cgcctcagtc ttatcaggat ttttcttagt gataatattt
    11221 atcacaccgc ctacagcatc actgccataa agcgtagaag ctggaccacg tataacctca
    11281 atacgctcta tcatagataa aggtggaaga taacctgact cactgccact aaagccatta
    11341 tcataaaatc catttgcaac actttgacgt tttccatcaa ttaaaactag agtataagaa
    11401 ctaccaaaac ctcgtatgct aaaatcataa gtgcctgttt tattcatagt cacatctaca
    11461 cctggaatat ctcctatagc ctcccctata tccttaattg gctttttttc aagctcttct
    11521 tttgtaatga tagaaatact agcaggcgca tcaaccaaat cttgttcaaa accactagca
    11581 ctaaccacaa catcattaag ttgatatttt tcttctgctt ttaacaaagc tccagataaa
    11641 attaaaaaac acagtaaact ttttttaaat ttcatatttt taatttgagt caaattaatt
    11701 cctttaaaaa taattatttt gatatttaaa atcatttttg aagtataaaa aaagaatact
    11761 tttaattaac ttaattttga taacaattat aaataataaa attatttaaa aaagcgaagt
    11821 aaaagcctaa gcctcttgat aggctccaag ctttaaaatt ttctgcatac gatttgcaga
    11881 aagttctcgt acgtcaatat tttcaagttc atttagagat ttttttacat aatcagcaat
    11941 agctactgct gcagcttctt tattgcgatg tgcaccattt gtaggctcat ctataacatc
    12001 atcaattaaa ccttgagatt ttaaatcatc agccgttacc ttcatagcct tggttgcagc
    12061 ttcacttttt gcaggatcat tccaaagtat tgcagcacaa ccttcaggag aaattactga
    12121 aaaaacagaa tttttcatca ttgcaagtct atctgcaacc cctatagcta acgccccgcc
    12181 actaccgcct tctccgataa ctatagcaat ggtcggtatt ttcaaatcac ttaattcata
    12241 taaatttcta gcgatagctt cactttgccc tctttcttca gcacctattc caggataagc
    12301 acctggagta tctatcaaaa ataaaatagg aatttgaaat ttctctgcaa gtcttgctac
    12361 tcttaaggct ttacgatatc cttcaggatg tggcatccca aaatttctag cgattttatc
    12421 ttttgttcca cgtccttttt gctcaccaat tacaattatt tttttctctc ctaaataacc
    12481 cataaaacaa acaatagcag gatcatctct aaaggcacga tcaccatgta tttcgtgagc
    12541 gtcatttaaa ataagttcaa tatagtcaag agcataaggg cgatctggat gacgcgctaa
    12601 ttgcaaacgt tgaaaatcac ttaaattctt ataagtttta gaaatttctt tttcaagatt
    12661 tttctttaaa atcgatacag cttcagtatc tcctttaatc tgagcattga taatatcctc
    12721 atcaatttgc tgaatatttt tttcaaaatc taaataagaa gccatattaa tctacttttt
    12781 taaatacaac acagccattt gtgccaccaa aaccaaaaga attactcatc accactttta
    12841 aatctacttt tcttgatata tttggaacat aatcaagatc acattcatca tcttttacga
    12901 gctgattgat tgtaggtgga actaccccat ctcttaaggc cataacacta ataactgctt
    12961 caattgcacc tgcggcaccc aagcaatgac ctgtttgtcc tttggtggaa cttataagcg
    13021 ggatattatt gccaaaaagc tctttaattg ctgctgtttc atttttgtca tttacagggg
    13081 ttgaagttcc atgtgcattg atataatcta cctttggatt ccctgccata tttaaagctt
    13141 ttttcatagc tcttaaaggc ccatctaaag ttggtgaagt aatatgatgt gcatctgcac
    13201 tttctccaaa tccaattaat tcagcataaa ttgtagcacc gcgtttttta gcctcttcat
    13261 attcctcaaa aactaaagct ccagcacctt ctcccatgac aaaaccatct ctttctttgt
    13321 caaatggtct tgaagcatgc tgtggatctt catttctagt tgataaagct ttcattgaag
    13381 caaaaccacc tatacccaca ggacaaatcg cagcttctgc acctatgact aacatctttt
    13441 tagcatttcc caaagctata cttttataag cttctcctat agcatgagtt cctgctgcac
    13501 aagctgtaac acaagaaata tttggccctt taagtccatg ctctatagaa atcaaacctc
    13561 ctaacatatt tacaagtgct gaaggtatga aaaaagggga aattttacgc ggacctcgct
    13621 cggaacaaat aatggaattt ttttctatgt taggcaaacc tccgatacca gcagccgaaa
    13681 caatgccaaa ttcttctttg tctaattctt cgctaaatcc agcatcctgc attgcttctc
    13741 ttgctgcttt aattccaagt tgtatgaaac ggtcaatttt ttttacttct ttgccatcaa
    13801 caacctctaa tggatcaaaa tttttaactt cagctgcaat ttgaacagga aagtctgtgg
    13861 catcaaaaag agtaatttta tttactccgc tttctccatt gcaaattgct ttaaatgaac
    13921 tttctttatc taaaccaagg gcattgatca tgccaatacc tgtaactaca actcttttca
    13981 agaataagct ccttgcaaga aaaaaattat ttttttagat tgtcaatata atttacaaca
    14041 tcttcaattt taattaattt ttcagcatca ctatctggaa tttctacttc aaatttttct
    14101 tctaaagcca taataagctc tacaacatct aaagaatcag cacctaaatc ttcaataatt
    14161 tttgattcca ttttaactgc atctgcatca atacttaatt gctctactac tactgctttt
    14221 acatcatcaa atgttgccat ttgctctcct tcaaaaaatt aaaataaagc gtattttact
    14281 ataaaaagct taaaatattt atagtttttc attatacttg aaaataaaat attaaaacat
    14341 aaaggaaaaa tgatgctttt ctctaattta atcaaagaaa atcaaaaaat ttggaatgct
    14401 tatctacatc atgattttgt taaaaaattg gaagataaaa gcctaaagca agaaaatttt
    14461 cttttttatc tcaagcaaga ttatatttat ttgcttaatt acgcaaaatg ttatgcaaga
    14521 ttagcactta actcaaatac cgcaaaagaa cttcgttttg ctatgaaatt tcaaaattat
    14581 atagttgaag gagaaatgga gcttcatcgt gcaattttat ctcttggcat taatgcagat
    14641 gaactcaata taaaagatga aagtttagtc aatatagcct attcgcgtta tatgttaagc
    14701 gtaggtgaaa atggagattt tttagatatg ttagttgctc ttagtgcttg cgctataggc
    14761 tatgcaaaaa taggtgctga aattataaat cgtttaaaaa atgaaaattt aaaagatcat
    14821 ccttacaagg aatggatttt gacctatgga agtgaaaatt ttcaaaatga agctaaagaa
    14881 tttgaagatt ttgttaattc ttatacttca agtgttagtg cacaaaaatt ccaaaaactc
    14941 agcgaaattt ttcatactgc aacacgcttg gaagtggctt tttgggagca ttctttaaga
    15001 atggaattaa atctttaaac atgggctttt tgcccatgtt tttatgcaat tttacttgca
    15061 tcaataatat tataatctaa accaaccatt tctttagaaa gtcctaatgc aagtcctact
    15121 aattgtgata aatgaatcat cggcaatctt gctttagaac tagtataatc ttgaaatctt
    15181 tcttgataga tatcaagctg catttgacaa agtggacaag gtgttacaac acaatcagct
    15241 tgattttcac ttgcattatt gacaatttga ctagacattt ttttcacaga tttttctgca
    15301 ggataagaag catgaaaacc acaacaatca aggcgttttt caaaaggaac tattttagcc
    15361 cctaaaactt ctactacact ttcaaaactt tttggattgg ttgaactttc ttttttaccg
    15421 aaagcatctt caggtcttaa actatggcaa ccataaaata aagctacttt taaatttgaa
    15481 agcggctttt tcaccttgct ttttaaatta tccaaatcct cataaagctc ccacaaaaga
    15541 cttgtaatag gcgttgaacc ttgatatttc attccacctt gtgctaaaaa agtattgatg
    15601 cgttcttttg cacccttatc aagagtattt tttgctttag ttaaagttag catacaagta
    15661 ctacaagttg taagcattgg cattttcatc tcttctgcta aagcaatatt tcttgcatta
    15721 gctaccaaag tcgcaatagg atcaacacac tgcgcttgag aagccccaca acaactccac
    15781 cccttaattt cattcaactt ccaacccaaa ataggtgcaa tagcttcaag tgaaatttta
    15841 gattcttttg cagcttgaga taaaacacaa cctggaaaaa aagcgtattc tttttgcata
    15901 ttttactcct taacagcagc ttcttgtgcc gcctttatca ttttaaccaa atctttatgt
    15961 ccttctattt catcctcgcc aaaaacatgc ataggattca tttttcctgc acgcataagt
    16021 ttaaaagcta tatctgtttt acccatagaa cctataacac cctcagaacg caaagcaaga
    16081 taaatttcat tcaagcgtcc tgaaccttca actaaatctt tataaaaagc ttcagcatga
    16141 tcaggcccta agccttcatt taaacctttt ttaatcgcca tcactcttaa atttgctata
    16201 tcacttactg aacttatacc ctttggacaa cgatcagcgc actcttgaca atgaacacaa
    16261 agccaaagtc cattcattac gctgggtttt acatgcaaca taggatcctt acctcgagag
    16321 tctgccgctg cacgccaagc atgagtaaaa acaaaaggtt gcatataatc gctactatct
    16381 gcttctaatt tattacactc tgaagcacag ctaccacata aaatacaatc ccattgcttg
    16441 ctaatacgat caaattcttc ttgactttgt ttacagccct tttccgctga aaattcattt
    16501 tttgccacca tggcaggacg aatttttctt aaattttcta tagaaggctc ccaatccaca
    16561 attaaatcag aaattactct aaaatttcca agcggagaaa tgcgtatact tgaaggatta
    16621 tcatattctt ttaacaaatc ttgcatttta gtatcacaag caagataaga atgcccattc
    16681 acacgaactg cacaagcccc acaaatcgca gattgacaag aggcggtaaa atttaaagta
    16741 atatcttttg tttttttaat aaaaagcaaa agagagagca gagtttttcc ttgtatatcc
    16801 ttatcatcaa tatcataact ttgttcatat ttttccttgc cattaaaacg atctatgatg
    16861 attttcattg tactctcctt ccatcaagtg aaaactcagt taccacgaca tctttataac
    16921 taagttttaa ttcatcattt tctaaattta caatgctatg ttttaagaaa tttttatcat
    16981 ctcgctttgg ataatcttct ctagtatgag ccccacgact ttcaagtcta tttctagctg
    17041 ctaaacaagc acagcgagaa agtaaaatca aattaccaag ctctacataa tctgtaaaag
    17101 cagtattcat cacttcatta ggatttggaa tacgaatttt ttcatatctt gcttgtatat
    17161 cttctaaatt ttttgctaga agatcgagtt tttcttgagt tctaaaaatc cccatattat
    17221 cccaattttg acttcctagc tcttctcgca attcatacat ttcttgacca tttccgccat
    17281 tatttgtaat ttctttaaat ctagcctgcc atttttgagc aagttcatga gtttttgccc
    17341 cttttccaaa acttgcatct ttggcataat ttgtcgcacc aatgcctgct aaatgcccag
    17401 ttacaactgc atcggctaaa gaatttcccc ctagtctatt ggctccatgt atagaaatac
    17461 aagaagcttc tccacctaca taaattccag caattttagt actcatatct tcaaatttag
    17521 ccacttcaat tccacccata gaataatgtg ccgttggacg gataggtaca ggagtatcca
    17581 ctaaatcaat attttcaaaa agcattgcag tgtgacgaat ttttggtaaa tcttttaaaa
    17641 ttttttcttt tcctaagtgg cgtacatcgc acaaaacata agctccaagt ccctcgccat
    17701 aacctctacc ttcgcgaatt tctgtttcta tagcacgcgc aactacatct cgcggggcaa
    17761 gctccaattt ttcatggtaa tttttcataa aacgctcacc acgattattt aaaagatatc
    17821 ccccttcacc gcgcgccgct tctgtaataa gagttccacc atttgcaact cctgttgggt
    17881 gaaattgtat catctcagga tcttcaaaac caagtcctgc tctaagagca gctgccacac
    17941 catctcctgt ggcaataaaa ggagttgaag ttctattata aaatatcctt gtgtatcccc
    18001 ctgtagcaat caccaaagct ttgcataata caggataaat tccaccgctt tgtatatctc
    18061 ttaaaacgac accctcgcat tttccatcca taacacctat atccaaaagt tcatgatcca
    18121 ttaaaaattt cacaccacta ctaatagcat catctaaaca agaatgcatt aaaatatgac
    18181 ctgttttatc tgcagaataa ttacagcgtt tcttagaagc tcctcccatt aaacgctgag
    18241 ctactccacc ttgctcattt cttgaaaaca aggttcctat aaaatccata ttaaaaatag
    18301 cctttccagc taattcacaa aattttaaag ccgcgtcttg atctaccaaa taagctccgc
    18361 ctttgatagt atcataagca tgtaatttat aggaatctcc attagaaaaa tcagtaactc
    18421 cattaattcc accctctgcc atacaagttg cgttacgcga tggcatcatc tttgtagcta
    18481 ctacaacgct taattttgga ttttcttttc tcactgcggc tgcagcacgc aaacctgctc
    18541 cacctgatcc aattaccaaa acatcacaag aaggtaaatt tgtatcttta tccatcttag
    18601 atgaatcatc taaggcataa actccacttg aacttgcagc taaagctcct acactaatac
    18661 aggctgtttt tataaaatct cttctagaaa attcacccat atcattctcc ttatttaaaa
    18721 aattaataat aatttttaat gtaagtcaat cttacataac cgcatgccaa aaatccaaaa
    18781 acaaactctc ctttcaatat aaaatggatt aaaaacaaat ttataattta ataaatataa
    18841 aaaagcataa gataagcaat caaagaagat agatgaatat aataaaataa atattaaaaa
    18901 atttttgcaa tatatcataa tctattcctt gcaaattaaa cggaatgatt ataccttaaa
    18961 aaaataacaa aaagttaata ttaattaaga taatatttat cttaattaat atatagttaa
    19021 taaaattatc aaatcattaa gccttaaaaa gcttaaattc tccattcata aattgcattc
    19081 tagcgcttaa atgatcaaga taaaaaactt caaattttgg attttgcgga gtttcataaa
    19141 gatttacaag ataaggatat ttttcaaaca tcattttttt aacttctaaa tttggttcaa
    19201 aaaccgcatt agccctaagt cttaaaaaag tcccatcttt tgcacaagaa caaaattcaa
    19261 taccattata attttttata tgcttaaaaa gtccttttgt atttgctgtg caaaaataaa
    19321 ttttatctct cacaagcaat ggactttgta taggacgcac tctaggattt ccacaagttc
    19381 ctaaagtggc taaaaatgct ggtacattat catctaaaaa ttgtgctatt tcttttaaat
    19441 ccatcatttt tccttacata tataaaccac cattgatctt aagcacatcg cctgtcacat
    19501 aagaggcata atcactaagt aaaaacgcta cacaattagc cacttcttca ggttctgcaa
    19561 agcgttttaa agggatattg tcttgatagg tttgtttgat ttcatcactt aaaacttcag
    19621 tcatatcgct ttttatgaaa cctggagtta cacagttaaa gcgtaaattt ctacttgctc
    19681 cttctttagc aaaagattta gtcatagcta tcattccacc tttactggca gaataattta
    19741 cttgtccagc attgcccatt tctccgacaa tagaagcgat atttacaaca gcaccaaagc
    19801 gttttttact catggttttt aaagcttctc tacaacctaa aaaagctgaa cttaaatttg
    19861 tatccacaac actgctaaag tcctctaatt tcattcttaa agcaagttta tcatttgtaa
    19921 cgcctgcgtt atttacaaga taacctaact ctccatcgct ctccactatg gtttttacac
    19981 cattttcaaa ctcatcttct ttgcttgcat caaatttaat cacagcagca acgccaccac
    20041 ttgcaataat ttcatctttt aaagcatctg caagttcagg ttttgaacga taattgatcc
    20101 aaactttaag tccaaaaccc gccaaagttt ttgcaataga agcacctatt cccttacttg
    20161 ctccggtaat taaaacattt tttccgctaa atttcattat ctatccttaa taagtttaat
    20221 tttaaaaatt gcaatcttaa caaatttctt ataaaaaagg caaacaaact aaaacaaagc
    20281 ctcattcatt tcttttggaa tttctaagtc taaaatttta agcacacttg cagcgatatt
    20341 gctaagcccc atattatctt taatctttga aactcccttt gcttgcacaa aaacaaaaac
    20401 atcaaaagta gtgtgattgg taagcaaatt tcctttttca tcttgcatag cttcgcaatt
    20461 tccatgatcg cttgtaatga taaaagcata atcatgcttt tttgcacatt ctacaatctc
    20521 gcccaaacaa gtatccaccg cttcaacagc ctttatagca gcattaaaat cacctgtatg
    20581 cccaaccata tctccatttg caaaatttac cactataaaa tcctcaccct tttctatgcc
    20641 ttttttcact gcatcacaca cttcaaaagc actcatttgg ggtttttcat cataagtttt
    20701 taccttgggg cttgggatta aaacccttgt ttcattttct aaaagctctt cttttccgcc
    20761 attaaaaaag aaagttacat gggcatattt ttcggtttct gcggtatgaa gctgactaag
    20821 ccctgcttta gaaatcactt gggctaaagt attttcaatt ttttcttttt caaaaagcac
    20881 agggagttta aatttatcat cataaacact catagtaagt aaattttcaa agattttttc
    20941 gcgttcaaac tctttaaaat ccttagaatt taacacttca acaagttgtt tcattctatc
    21001 atttctaaaa ttgataaaga taatgccatc ttcttctctc atgcccttgt aattctcatt
    21061 ttgagctgct ttgataaact catcagtaac attttcatcg taagattttt gtaggtattc
    21121 taataaattt ggcactttat aagccttacc taacaagcac tcataatact cttttaccct
    21181 atcccaacgc ttatctctat ccatagcata aaaacgccca caaagcgtag caaaatgcac
    21241 gcctaagttt tcacaaaatt cttttaaatc ttttatgaaa tttaagccac tttttggact
    21301 tacatcacgc ccatcagtga ttgcgtgagc aaaaacttca ttgccatttt tcgcacaaat
    21361 ttcaagcatg gctttaaaat gcgtatccat agaatgcacc ccgccatcac tataaagccc
    21421 tataatatgc actcttttac attttgctaa aagtttttgt aaattctcat ttttttcaag
    21481 ttctttgttt tcaatggctt tattaatacg cactaaattt tgataaataa tacgcccact
    21541 tcctatacac atatgcccta cttcactatt tcccatctgc ccttctggca aacctacagc
    21601 taaaccactc gtttttagta aagaatttgg gacttcctta aaaagctttt cataacttgg
    21661 ttttttagct gcttcaaaag cattaaactt actattctta ttatacccta ttccatctgt
    21721 aataattaaa acgcattttt gcttcatttt tctctctttt ataagaattt ttttggttag
    21781 attttactaa aattaaactt ttaaaaacca aaaagaaggc taggttttgt attatctttc
    21841 agatttaagt cattatgctt tttttactta tattagtgtg cgtgcaggat ttgcattttt
    21901 tatcgcttta tgtttatctt tatttttaat gcctaaattt attacttggg caaaagctaa
    21961 aaatgctagt caacctattt acgaatacgc cccagaaact cataaaacca aatgccatac
    22021 tccaaccatg ggtgggctta ttttcatcag ttctgcagta atcgcaagtt tattttgtat
    22081 caaatttgat aatatttttg ctataagtgc tttactttgt ttgatacttt tttgtttaat
    22141 aggactcata gatgatttag gcaaagttct aaaaaaagat aatcattcag gacttagtcc
    22201 aagaatgaag cttttagcac aaatcatcgc tggacttatt tgcatcttac ctttatattt
    22261 tagttcagag cttagcacgg aactttttat acctttttac aaacaccctc tttttgatat
    22321 ggaaattttt gccattgttt tttggatttt ggttttaatt tctagctcta atgctgtaaa
    22381 tttaaccgat ggacttgatg gcttagctac agttccaagt attttttctt tatctacttt
    22441 agggatattc ttatatttga gcggaaattt aaattatagt gaatatttac ttttgccaaa
    22501 aattcaagga cttggtgaag tagtgattat ttgtgctgca ttaatcggtg ctttaatggg
    22561 atttttatgg tacaactgtt atcctgcgca ggtttttatg ggggatagcg ggagtttagc
    22621 tttaggtgga ttcataggat ttttagctat cattagcaaa aatgaaattt tacttttact
    22681 cataggtttt gtttttgttc ttgaaactgt ttctgtaatt ttacaagttg gaagttttaa
    22741 aatttttaat aaaagagtat ttaaaatggc acctattcat catcattttg aaaaagttgg
    22801 ctgggtagaa aataaaatta tagtgcgttt ttggatgata gccttacttt caaatttact
    22861 tgcacttgca tcaataaagc taagataatg aaaatttcac tttttggata cggaaaaacc
    22921 acacgcgcta ttgctgaaaa tttggtagat aaatttgggc cttttgatat ctatgatgat
    22981 cattttacag aaacaaaaaa agatacacta ggaaatttac ttttaaatcc taatgatttt
    23041 gatgataatt taagcgatat tgaaattcct agtccaggtt ttccaccaaa gcacaaactc
    23101 attcaaaaag caaaaaattt acaaagcgaa tatgactttt tttatgatat catgccaaaa
    23161 tccgtttgga taagcggaac caatggcaaa actactacca ctcaaatggc tacacattta
    23221 ttatcacaca ttggtgctgt tataggtgga aatgttggaa ctcctttagc agagcttgat
    23281 ccttatgcaa aactttggat acttgaaact tcatctttca ccctacacta cactcataaa
    23341 gctaaacctg aaatttatgc acttttacct ataagtcctg atcatctttc ttggcatgga
    23401 agttttgata attatgttca agataagcta agcgttttaa aaagaatgaa tgaatgcgat
    23461 gtagtaatac tgcctaaaat ttatgcaaat actccaacaa aagctcataa aataagctat
    23521 aaagatgaaa aagatctagc tgttaaattt ggcattgata cggaaaaaat ttcctttaaa
    23581 agtccttttt tactcgatgc tatcatggct ttagctatag aaaaaattct acttgatact
    23641 ttaagctatg agcttttaaa tagctttgta atggaaaaaa ataaacttga agagcttaaa
    23701 gacagtcaaa atagactttg ggtaaatgac actaaagcca caaatgaaag cgcggtaatg
    23761 gctgcactta atcgctataa agataaaaaa atccatctta tcataggggg agatgataag
    23821 ggtgtagatc ttagcaattt atttgatttt atgaaaaatt ttaacataga actctatgct
    23881 ataggtatta gtaccgaaaa aatgcttgat tatgcaaaaa aagcgaattt gaaagcctat
    23941 aaatgtgaag ttttatctaa agctgtaaat gaaatttcaa atcacttaag agtcaatgaa
    24001 gtggctcttt taagtcccgc ttgcgcaagt ttagatcagt tcaactctta cgtagagcgt
    24061 ggaaaagtct ttaaagaatg tgtgaataaa atttaattta ttatacaatc catacaaata
    24121 tattaaac
//
LOCUS       DARBAC010000012        23354 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.012, whole genome shotgun sequence.
ACCESSION   DARBAC010000012 DARBAC010000000
VERSION     DARBAC010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23354
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.012"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1672)
                     /locus_tag="SB799_000340"
     CDS             complement(<1..1672)
                     /locus_tag="SB799_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEG0867607.1"
                     /translation="MKELFQKIWQNELQFLNFDAKFQDKNKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSIQNAQICILNLFKSGFIPKQDLLKALKILEKISK
                     NTEIFDFISQEKVQSIDQKALFQNDFKELNTINLELQKLSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKK
                     EWQNILESSHFNADLKEFIDKLDKSVNIQDFIKDKPLIQNIALCELKNFSSAKNKISA
                     LIKKIEIKSHLDFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLT
                     QKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKSLAPKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKEL
                     HLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSVAKLK
                     NIDSGIDNLVLLLVKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTK"
     gene            complement(1700..2425)
                     /locus_tag="SB799_000341"
     CDS             complement(1700..2425)
                     /locus_tag="SB799_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HEG0867608.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            complement(2418..4409)
                     /locus_tag="SB799_000342"
     CDS             complement(2418..4409)
                     /locus_tag="SB799_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HEG0867609.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            complement(4393..5175)
                     /locus_tag="SB799_000343"
     CDS             complement(4393..5175)
                     /locus_tag="SB799_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HEG0867610.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            complement(5244..6059)
                     /locus_tag="SB799_000344"
     CDS             complement(5244..6059)
                     /locus_tag="SB799_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEG0867611.1"
                     /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            6149..7048
                     /locus_tag="SB799_000345"
     CDS             6149..7048
                     /locus_tag="SB799_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HEG0867612.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALEPINIEQNNNYSDYFENSVLKIRIEKEIDLLKRNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNAQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNLQNSTN
                     LSSSTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENTPTQNI
                     PTNPSSTNQNNQSKNQDGVEIFE"
     gene            complement(7122..7910)
                     /locus_tag="SB799_000346"
     CDS             complement(7122..7910)
                     /locus_tag="SB799_000346"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEG0867613.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAINALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLY
                     KNLQDFDFDLVINSTSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKE
                     YHLKIKDGLDMLLWQGVFAFELFFEIRDKREMIKNAMQQALILK"
     gene            complement(7907..8743)
                     /locus_tag="SB799_000347"
     CDS             complement(7907..8743)
                     /locus_tag="SB799_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEG0867614.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSENTTPQASTPKQEVTQTAKPKEE
                     AKKQTAVKKEKESTKQIPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGGKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFT
                     LK"
     gene            complement(8757..9302)
                     /locus_tag="SB799_000348"
     CDS             complement(8757..9302)
                     /locus_tag="SB799_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HEG0867615.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            complement(9299..10543)
                     /locus_tag="SB799_000349"
     CDS             complement(9299..10543)
                     /locus_tag="SB799_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEG0867616.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVIGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPHAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDINNEKLQ
                     ENIKQELKKLASNFIIYERAMF"
     gene            complement(10540..12045)
                     /gene="lysS"
                     /locus_tag="SB799_000350"
     CDS             complement(10540..12045)
                     /gene="lysS"
                     /locus_tag="SB799_000350"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEG0867617.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFNKDSVGEELYAIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKVDGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            complement(12046..12519)
                     /locus_tag="SB799_000351"
     CDS             complement(12046..12519)
                     /locus_tag="SB799_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEG0867618.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            complement(12521..13084)
                     /locus_tag="SB799_000352"
     CDS             complement(12521..13084)
                     /locus_tag="SB799_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEG0867619.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIVCLLAGNFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHASEKLQDIVSDLNNTQKGE"
     gene            complement(13152..13436)
                     /gene="gatC"
                     /locus_tag="SB799_000353"
     CDS             complement(13152..13436)
                     /gene="gatC"
                     /locus_tag="SB799_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEG0867620.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIVQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            13580..14158
                     /locus_tag="SB799_000354"
     CDS             13580..14158
                     /locus_tag="SB799_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867621.1"
                     /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVII
                     LVAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYAIFLLKEN
                     INDFNNTALQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNK
                     IEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            14155..15153
                     /locus_tag="SB799_000355"
     CDS             14155..15153
                     /locus_tag="SB799_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867622.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPEQTNGDLSHNGNLKSKIV
                     DWNLVSAKLSNNTAILKNNISIDKFKLPKNYILIAYQDGEYFTADDNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQVIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNTQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
     gene            15150..15440
                     /locus_tag="SB799_000356"
     CDS             15150..15440
                     /locus_tag="SB799_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HEG0867623.1"
                     /translation="MIKILEQTIKALKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            15427..16056
                     /locus_tag="SB799_000357"
     CDS             15427..16056
                     /locus_tag="SB799_000357"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEG0867624.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLSIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            16175..17521
                     /locus_tag="SB799_000358"
     CDS             16175..17521
                     /locus_tag="SB799_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEG0867625.1"
                     /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKIAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIVHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFIDKSLFVKDAKKIVPSLKTSDIYYAKGFGGVRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLICNYLGMEFNEDKFSSELL"
     gene            17570..19012
                     /gene="pyk"
                     /locus_tag="SB799_000359"
     CDS             17570..19012
                     /gene="pyk"
                     /locus_tag="SB799_000359"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEG0867626.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVSIDNQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            19110..19745
                     /locus_tag="SB799_000360"
     CDS             19110..19745
                     /locus_tag="SB799_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867627.1"
                     /translation="MQVNTFSNIASMAQTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSGKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQDTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(19776..22238)
                     /gene="pflB"
                     /locus_tag="SB799_000361"
     CDS             complement(19776..22238)
                     /gene="pflB"
                     /locus_tag="SB799_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HEG0867628.1"
                     /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASL
                     PEELPQENSDSGFKFTRESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFSEGKIKPDIIASKPLEQPVVMPDESYKYNDMQRIDGMIQKANALYLKGE
                     VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDV
                     EPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALS
                     TAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDAYKIQVRLNK
                     DLFNIAVAQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDSA
                     DAGVYLNTSKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNIAADSN
                     FKANMQKSMLFLVNNNYISMLPYLDETKKDTPLSLIFEAIVAKNNNLNNQVDVKIAKL
                     RSELPEDILANILYFNSLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPSIAREFYVN
                     LMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYG
                     AKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAI
                     SQYKTLPNNFKSEFFTFDINNN"
     gene            complement(22248..>23354)
                     /gene="serS"
                     /locus_tag="SB799_000362"
     CDS             complement(22248..>23354)
                     /gene="serS"
                     /locus_tag="SB799_000362"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEG0867629.1"
                     /translation="ALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSVKVN
                     ALENELEEIAHAIPNIPDECVPVGEDEDENVELKKVLNPPSFDFTPKEHFELGESLNW
                     LDFVRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSHGFEFVNVPFLVNGATMFGT
                     GQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAG
                     SAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCT
                     GDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLN
                     GSSLAVGRTLVAIMENYQDKEGKIHIPDALKKYF"
BASE COUNT         8199 a         4128 c         3037 g         7990 t
ORIGIN      
        1 ctttcgtggt aatatcaact atatttaaaa tacgagaaag attaagcttt tgtgcattat
       61 ttttcaaata tttaaactca tctatcaagc gttcttttaa ttttttaacc aaaagtaaaa
      121 caagattatc tatgccacta tctatatttt taagttttgc aacggaattt gaaatttcat
      181 cttgtgcttc ttttaataag gtgttttgct tttgaagttc aagtaaaagc ttttgatttt
      241 cttcacttac accttgttta ttctccttaa taagacgatt ttgcatttca tattcgctta
      301 gaatattttt aagctctaaa tgcaattctt ttttgtaagc tcttaaggca atcttacttt
      361 tttctcctgc gtaaagctcg ttaaaaagat agttttcaaa ttcttgcata ccactttttt
      421 gcaaactttc cttaggcgct aaactcttat aaaaatcact tgccatttta gcactcacac
      481 ataaaaaatc aatcttttcc accaaatttt catctaaatc cacaagtctt gattttaagc
      541 tttctttggt ataaacaatg acttcttcta aatccttttt gcttaacaaa tccgctttag
      601 ttaaaacaat taaaaactta ctcagccttg aatttaaaag acaatgcacc aaaaagtctg
      661 catctttttg agtcaagctt tgagaagcat tcattaaatg aattaaaaaa tcactttctc
      721 taagatactc atttgtaaca atttctcttt gaactacaac atcatcaagc cctggagtat
      781 caactatgga aatattattt tttaaaaaat ctaaatgact tttaatttct atttttttaa
      841 ttaaagctga aattttattt ttagctgaac tgaaattttt aagctcgcaa agtgcgatat
      901 tttgtattaa aggtttatct ttgataaaat cctgtatatt tacactctta tccagcttgt
      961 caataaattc ttttaaatct gcattaaagt gcgaactttc aagtatattt tgccattctt
     1021 ttttatccca aaaatatatc tttgcttctt cactcttacc atagcttaat actgttaaat
     1081 tagctgtttc aggtatgttt gaaacgccta aaaaatcttc ttttaaaaga gcatttaaaa
     1141 ggcttgattt tcctgcattc atcacgccag tgatggctat attaaactct aaattttgaa
     1201 atttttccaa agttttttga agtcttgatt ttaaattttc atcaaaactt agcttttgaa
     1261 gctctaaatt aatggtgttt aattctttaa aatcattttg aaataaagct ttttgatcta
     1321 tactttgaac tttttcttgt gaaataaaat caaatatttc agtatttttt gaaatttttt
     1381 ctaaaatttt tagagcctta agtaaatctt gctttggaat aaaacctgat ttaaaaagat
     1441 ttaaaataca aatttgagca ttttgtatac taaaaatatc cactcttaaa tcaatttttt
     1501 tgcaaagctc ttgaaattct tttaagagaa aatatctttc ataattgtct ttattgacac
     1561 ttaaaataat cgcacactcg gctgtatcaa gtttgttttt atcttgaaat ttagcatcaa
     1621 aatttaaaaa ttggagttca ttttgccaaa ttttttggaa taattctttc ataatcttcc
     1681 ccttaaaaag gggaaagatt tatttatttc tttgagcgac aagttgtctt ctcatataag
     1741 cgattttact ttgtaaaggt aattctttag ggcaattatc ttcacaagca agcaacgaca
     1801 tacaaccaaa aacaccatca tcatcgccta ctaattcata aaaatcttcc acacttctat
     1861 ggtcatgcgg atcttgtaaa tatctagctg ttcttaaaag ccctgtagca gctatgaaat
     1921 ttgggcgcat aagtttagtt gcacaagaag ctacacaaat tccacactct atacaacgat
     1981 caagttcaaa agtttcatcc gcaacttctg gctcaatgcg ttcttcaagt ttagaaatat
     2041 cagtttcttt ttcattatgc acccagcttt caacacgctt acacatgtct tcaaaccact
     2101 cgcctgtatt cacgcttaaa tctttaatat gcctaaatgc aggcataggc ataagctcta
     2161 tcactccatc aggataatct ttagtcaaag ttttacaagc aagttttggc actccattaa
     2221 tcatcattgc acaagatccg caaatccctg cacgacaaac aaagtcaaaa ctcagatctg
     2281 catccatttt ttcacggatc aaagtcaaac atacaaaaac cgtcataaaa ggagtttctt
     2341 caagctcata agtcacaaaa tgtggtttag aaattttgct taaaggattg tatttaaatg
     2401 cctttattgt caattttcta ctcataatca actcctattc tttggtttgg tgctttatat
     2461 ttagcttgca attcataagg cattaaagcg ttttgaattt cataacgacc tttgccttca
     2521 gcttccattt tttcacggat agcatccact tcagcttggc gtttttcact taaaggattt
     2581 tctataatat ttcctttagc tccatatcca cggaatgctg gtggaatttc cattttcata
     2641 atatcaagct cttcgtattc tatgcgtggt aaggtttcgc cttctaccca aaaagtattg
     2701 gttcttttca tccaatttaa atcatctctt tttggataat cttccctata atgcgccccg
     2761 cgactttctg ttcttaaaag cgctccataa gctacgcaaa gtgctatttt taacattctt
     2821 ggcactctat acgcttcttc aagctctgga tttgcacaat caagttcttt acaatgtact
     2881 ttaacgtctt gagaatcttt ataaagtttt tcaagttcat ctactgcttc tttcaaacct
     2941 tcacctgttc taaagatggc caccttatcc cacatgattt ctttcattct gtttttgatt
     3001 tcaaaaacat tatgtttacc ttctttatct actaaagatt ttaaatattg atactcttta
     3061 gttaagaagt cttttactac atttgtatca attacttcac cattattttt acaataatct
     3121 gcaaaataat ctcccactat catacctgct acaacagttt cagcacatga atttccacct
     3181 aaacgattaa atccgtgcat atcccagcaa gctgcttccc cacaagcaaa aagtccgttt
     3241 aaccattgac tttcacccgt tggtttagtt ctaattccac ccatagaata atgctgcatt
     3301 ggaagaactg gtgcccaacc ttttggaccc tcgtctgctg gatcaatacc attaaaagtt
     3361 ttacaaatat cttgcacatc acgaagattt ttttccacat gagcacgacc caatatagaa
     3421 atatcaagcc ataaatgatc cccataaggg ctttttacac ctttgccttt acgaatatgt
     3481 tccatcattc tacgacttac cacatcacgg cttgcaagtt cttttttctc tggttcataa
     3541 tcaggcataa aacgatatcc atccacgtca cgtaaaattc cgccatcacc acgacaaccc
     3601 tcagtaagca aaataccgct tggtacaata ggagttggat gaaattgcac tgcttccata
     3661 tttgaaagtc tgcaaagccc tgtttcaaga gcgatggctg cacccgttcc ttcgcaaatt
     3721 accgcatttg tagtttgttt ataaattcta ccatagcccc ctgttgctat catggttcct
     3781 cttgcaatat aagcaatgag ttgtccatta gttaaatctc tagcaattac acctaagcat
     3841 tttttaccat catggatgat tcttaccgct tccattctat cgatgatctt tacttggtgc
     3901 ttaatggctt catttgctac accataaagc atacaatgcc ctgttgcatc tgcgatatag
     3961 caagttctcc attttttagt tccaccaaaa tctctagcat taataagccc gtgcgcttct
     4021 tctttttctt caatcacagt tttttgtgca ttgattacaa cagttcttgg acctttagta
     4081 actctagtcc aaggcacacc ccaagccgca agttcacgca ctgcttttgg tgcagtttga
     4141 gcaaacattc ttgctacttc ttgatcacag ccccaatcac ttccttttac tgtatctgcg
     4201 aagtgaagat cttcattatc accctcacct tttgccccat ttgctaaact tgcctgcata
     4261 cctccttgca ccgctgcaga gtgagaacgc ttcactggac aaatacttaa aagtgttaca
     4321 ctttggccac tctttgctac ttcaatagcc gctctaagac ctgctaatcc tccgcctatt
     4381 actaaagcat cactatattg tatattcata atttgctcca ttgtagtttt ttatcatcgc
     4441 agtagtttgg gtttgatttt ggtagttttc ataacctatt tttataaatg ctgcaagact
     4501 taacacacct aaaactagga agaaaatact gattatccat ttagcagttt taagcttttt
     4561 gcgactttct tttacatttt ttccttcaaa ccaaccccat ttaacacaaa gtctataaag
     4621 ccctatactt ccatgaagtt caacacagac taaaagaaca gcataaaaaa gccacataaa
     4681 atgacttaca accctatctc ctgacatatc gccgctgatt ttatctgcat tggttacaat
     4741 aaaaataaga tgagcagaac ctaagaaaaa cataataaaa cctgtaaaag cttgaaccca
     4801 ccataacgaa gtatcgctgt gattcatttt tttactgtgt gttcttagta tttgatactg
     4861 acggtaatta ataggaaatt ttctcattgc aagtaaagca tgaacgaaaa aaaccactaa
     4921 aacacaggcg gctaaaaatg aagtaagata actcataaca ggattatcgt aaacaaattt
     4981 taattctaaa aaatgcacta cagaattaaa aaaatcctca ctgactaaaa ttgtagaaac
     5041 aaaaagcata tgcacccaca taaaaagacc taaaaaaagc cctgaggcac tttggataaa
     5101 gtctaatttc gcaggcattt tacttttttt gccctcaatg ctcttaccca aataaccttc
     5161 gataagctca cgcatcttta ctcctttgta aaaagaaatt aaaaaaatcc atttcattat
     5221 attacaaaag tctttaagat agattaaata tttacttttt taaactttat acaaatataa
     5281 actaacaaag ctgttataaa cattataaaa cttaaaattt gccccatact cataccccat
     5341 aaaacaaaac ctataccaaa atcaggctcg cgataaaatt cacatataaa tcttgctaat
     5401 gaataagcac cagcataaac aagaatcaat tccccttgaa aactttgctt aaatcttgct
     5461 aaataaacta taataaaaac aacaatacct tctaaaaatg cttcataaag ttgcgatgga
     5521 tggcgcaata ctccatcaac ataaattccc caaggcacat ttgtaatgcg accaaaaagc
     5581 tcttgattta aaaaatttcc tatacgacca aaaacataag ccaatggaac acttaaagca
     5641 accaaatcaa gaaaaatcca aggatttgtt ttatattttt tacaaaacaa taaagtagct
     5701 atcaaaaatc ctataattgc tccatgataa ctcatacctc gaatacctac aaattcacca
     5761 ttaatataag gattaaaaat ttgccaagga tgagtaatat aatacatagt atttgcatca
     5821 taaatcaaaa tatatccaag ccttgcacct aaaataaccc ctatttcaac ccatataaaa
     5881 taactatcca aatgtttttc attaatgtct agttgaaatt ttcttacaaa aaatttagcc
     5941 aaaagcaaag ccaaaagcaa agctataaca tacataatgc cataccaatg cacctttaaa
     6001 ccaaagatgc taaaagctat aacattaaaa tttgaataaa tatgctgcca aaattccata
     6061 tatctttcct aattttcttt tataaaaata taacaaaaaa actttaactt gctataatta
     6121 acacaaacac attaaataaa ggtaaaaaat gaaaaaatat attttacttg ctagtagtat
     6181 gttaatttta gcagcttgtg ggggtacaag cagtaatttt gtcaatgttt ctatgccaaa
     6241 ttttaaaccc caagttccaa caaaggttga acctattgat tctggagtaa gcattgctct
     6301 tgagcctatt aatatagaac aaaataacaa ttattctgat tattttgaaa attcagtgct
     6361 taaaattcgc atagaaaaag aaattgatct tttaaaacga aatttagaag agcagatcaa
     6421 aaccatcgct caactaaaag gctataaaat agttactact aatccagact atactcttaa
     6481 aagttcaatc agtatttata cggaagaaaa aaatgcacaa aaaacaagca attttatgag
     6541 tggagattat gtaaaatcca atttaggtat aaattttaaa ggtaaaatag attttataga
     6601 tgcacacaat ctacaaaatt caaccaatct ttcaagcagc accaaactag attctttagt
     6661 tgcgcttaac tatcctatta aaaatgatga tggggttaat atgtttaaaa ctactatctc
     6721 caccgtacca actcaactta ataaaggttt agagcaacct gcttttgaaa ttgataaaag
     6781 ttttttagct ttttataaaa atacattaaa tacactttat aacaatcttc caaaagcaac
     6841 agacataggc aaaactatac ctaatacaaa cagtggtttt aatagttttg atggcgatgc
     6901 tacttttgaa gaaagtctac ctcaaacaaa ctctaatcaa aataatacaa ttgaaaacac
     6961 acctacacaa aatattccta caaatccatc ttcaacaaat caaaataatc aaagtaaaaa
     7021 tcaagatggg gtagaaatat ttgaatgata aaacttgtga gaaaattaaa ctttctcaca
     7081 caaaaaataa gattttctta tacaaaaaaa taactatcat tctactttaa aatcaatgcc
     7141 tgttgcattg cattttttat catctctctt ttatctcgta tttcaaaaaa aagctcaaaa
     7201 gcaaaaaccc cttgccataa aagcatatca agtccatctt taatttttaa atgatactct
     7261 ttacacaatc tataaaaagg tgtttctctg ccataaatta cctcaaaagc aaatttagct
     7321 ttaggtaaaa ttctatctaa aagctctcta tcacaaggta aattttcatc ttttaatcca
     7381 gcagaagttg aatttataac caaatcaaag tcaaaatctt gcaagttttt ataaagataa
     7441 gttggataag ctaaaaaatc tttaaatctt tctttactac gattagctat atacacttct
     7501 acgccttttt gttttaatgc ataagcaagc gccaaagctg tacctccagc acccaaaatc
     7561 aaagcttttt ttatattatc aaaatcctta atagcctcta aaaaacctaa agcatcagta
     7621 ttataagcgt aaattttatc ttcttttaag cataaagtat ttgcagagcc aatatttcta
     7681 gcaaaatcat ccttcacatc agcaatatct aaagcttttt ccttaaaagg caaagtaata
     7741 ttagctccac taagtcctaa tttaaaaaaa tcttctctta aacagttagc atttcttaaa
     7801 tgatagcgtg tataaatgct atcaagccct aaggcattaa tagcattatt atgcattcta
     7861 ggcgatttag agtgagaaat aggatcgcct ataactgcta aaaatttcat tttaaagtga
     7921 aagaaaaagc atcttttgca atatccttac ggattttagc aagttctgct gcaatatctg
     7981 ccttttcaaa tggtcctatt aaaaccttgg taatttcttt acctccaact gtagttttat
     8041 aaagtttata atcataacct ttctgtttta cagaagcaag ttcttttgat ttttgatcta
     8101 aattacttac tgagaaaatt tgcacataaa tgcccgatgc taaaccactt ggatgcacag
     8161 gtttagcatc aacattttta aataaatcat ttgcattttg ttctttttta gggatttgtt
     8221 ttgtactttc tttttctttt tttacagctg tttgtttttt tgcttcttct ttaggttttg
     8281 cagtttgtgt tacttcttgt ttaggagtac ttgcttgtgg agtggtattt tctgaagtag
     8341 ttgctgtggg ttctgctgga acttcttgat caggcatagc aaaatttgta gtatcattgt
     8401 tatttgaact agaggttgtt gtattttgag ttgtattttg ttcatcttga aattgttttc
     8461 ttaatgcctc aaattgatct tctgctgaag tattatctgt aattggcata ctttcaaaag
     8521 aagtatcatt gttattgtct tgagttgcta taggttcact tggcaataca ctttgatttt
     8581 gcgtattttc atcaccacta ccattaataa gcttcataac tatcatgata gctaaaaaca
     8641 aaataactaa agcaataact cgtaaaagaa ttttttttac tttttcactt ttattacttt
     8701 tttctaaaat aatatcatca aattcatttt tttgattttc cataatttgt cctttcttac
     8761 atatgcttag accaagaact tcctcgttct ttttgataaa cctcataagg caatattaaa
     8821 atattaaatt ccctaggtac atccatacta ggaaacacct tccattctac tggcatttta
     8881 cttgcaaaca tcattgaaag tttagacgct aaagaataac cttcgtttaa cgccgtgtgt
     8941 cctttgtgaa tataaagatg taaatgtcct ggagttttag tcttataggc tgtgaaattt
     9001 ataaaacctt cttctcttaa aataagttgt gcacggtgat aaaatctttc agcattaaaa
     9061 ccattataat caaagacaat attttctact ttattatctt ttgttattaa atcatgagcg
     9121 acaacaattt ttttagcagc gtgttctctc atgacattta aatttaaagg agcatcaact
     9181 ctttcaaatt tatcaaaaaa taagcgacct ctatgtgtaa ttttatttac aattttatcg
     9241 cgtcttatat aataatgatc gccaattatt ttaattagcg acatatccat tggtgaaatc
     9301 aaaacatagc cctttcataa ataataaaat tacttgcaag tttttttaat tcttgtttaa
     9361 tattctcttg taatttttca ttattaatat catctaaaat atctgcaata taatttgaca
     9421 caatttccat ttctttttct ttaaaacctc tggcagtaag cgctggagtt ccaagtctta
     9481 atccacttgt gataaaagga cttctaatct ctcctggaac ggtattttta tttgcagtaa
     9541 tacctgcatt tccaagagct aaatctgcat cttttccact aaattcacga tctaaaaaac
     9601 tcattaaaac aaggtgatta tccgttccat cgctaacaag tttaaatttt ctatccatta
     9661 aaacattagc taaaacttga gcattggttc ttacttgttt tgcataaact ttccactcat
     9721 cgctaagatt aaatttaaat cctactgctt ttgcagcaat tacatgcatc aaaggaccac
     9781 cttgaatacc tggaaaaatg gcagaattaa tttttttagc aagctcttca tcatttgtca
     9841 taataatacc acctcttgga ccacgcaaag ttttatgtgt ggttgagctt actacatgag
     9901 cgtgcggaaa aggacttgga tgctcgcctg ccacaacaag acctgcaata tgtgctatat
     9961 cagcaaaaag ataggcacct atttcatcag caatttctct aaatttagca aaatcaatca
    10021 ctcttgcata agcactagct ccacaaacta ttaattttgg cttttctttc ttagcgattt
    10081 ctcttacttt ttcataatca attcttccat caagttctac gccgtaaaaa caactttcgt
    10141 acattttacc cgaagaactt acttttgcac catgagttaa atgtccacca tgacttaaat
    10201 ccattcctaa aattttatca cctggattaa tcaaagccgc ataaacacct tgattagctt
    10261 gagaacctga attaggctga acattagcaa atttacaatt aaaaagtttt ttacatcttt
    10321 caatagctag agtttcaatc tcatcaacaa attcacaacc accataatat cttttacctg
    10381 gataaccttc tgcgtatttg ttcgtcaaga tacttcctat aacttccatt acttcaggta
    10441 aagtgaaatt ttcactcgct atcatttcaa gaccttcgca ttgacgctct aactctttgt
    10501 ttgttaaatc aaaaatttct ttatcaaaca tttctaaact cattctttct cctttagttc
    10561 tgattttaat ggacgcattg caggaaacaa tatcacatct cgaatagatt ttttatttgt
    10621 caaaagcata acaagtctat ctatacctat accctgccct gccgttggag gcattccata
    10681 acccaaagca tttacaaaat cttcatccat ttcgcaagcc tcttcatcgc ctgcattttt
    10741 agcttcaatt tgttttaaaa atctctcata ttgatcaaga ggatcattaa gctcattaaa
    10801 accatttgcc aattctcttc cacaaataaa caactcaaat ctctcagcaa tctgagaatc
    10861 ctcatcgcta cgtcttgata aaggacttat ggaaatagga aaatcaatca caaaagtagg
    10921 attgatcaat ttttcttcca cataattatc aaaaagttca gcttgtaaat gtccaagttc
    10981 aagcttttca ttcgcttcaa aaccatctac ttttaattta gtaagaattt tttccttatc
    11041 ttcaattaaa tccctatcca aaccaccata tttacaaagt gcatctttgt aagtaattct
    11101 ttcaaaaggt ttagaaaaat ctatcatttt tccatcaaat tctattgttt ttcccaaatt
    11161 aagtttatct aaaagtaaag caaaaagttc ttcagttaaa tccattaaat ctttataatt
    11221 atgataagcc caataaaatt ctatagttgt aaattcagga ttatgggtta aatccatacc
    11281 ttcgtttcta aaacaacgat tgatttcaaa aactgcctca aaaccaccca ctacaagtct
    11341 tttaagataa agttctggag caattcttaa aaatctttct acgcctaaag aattgtgaaa
    11401 agttacaaaa ggcttagcgt ttgctccacc tgcaatcgga tgcatcatag gagtttctac
    11461 ttctaaaaag cctttatttt caaaaaaatg acgaatcaaa ctcaccactt tagaacgcac
    11521 taaaaaatct tttctaactt ctgcattcat tatcatatca acataacgtt tacgatatct
    11581 ttgctcaata tctgttaatc catgatattt ttcaggtaaa ggaacaatag cttttgtagc
    11641 gagttttact tcacttgcat gcaaactaaa ctcacctgtt ttagttacaa aaggaaaacc
    11701 tttaaccaaa acaatatcac ctacttctaa attctttttc aaaatcgcat aaagttcttc
    11761 acctacacta tctttattaa aataaatttg caaatttgta tcttcatctt caatgtttgc
    11821 aaaaatcgat ttcccagcta tacgcaaaag tttcaaacgt cctgcaacaa cagcattgac
    11881 actttcatct cttttttcaa cttgctctaa aatataagaa aatttatcct taaaagtctt
    11941 taaagacatt tctttttcta aaaaatgagg ataaggattg atccctaaat tttttaattc
    12001 cttggctttt tctattcttt gctgctctaa aatattatca aacatttata tttttacctt
    12061 tgctttttga ttgttacaat caccacaaac accataaagc tgcatcaaat gccctgtaag
    12121 tttaaaacca tgttcttttg caatcaaggc ttgctgtctt tctataatag gattttcaaa
    12181 ctctataatt tttccgcaat ttttacatat catatgatca tggtgaggtt tattggcaag
    12241 ctcgtatttt ttacctgctg aaccaaaaga aatggaagtt accatttctg cttcttcaag
    12301 caaatttaaa gtacgataaa cagttgcaat tcctacattt aaatcgggtt cagcttgttt
    12361 gatttccata tataaacttt cgggtgtgta atgagtatca ctgtgataaa gagtttttaa
    12421 aagtacttct ctttgcttgg tatatttaag tccgccttgt cttaatattt ttttaaatct
    12481 ctcaagtaaa acatcatatt ccacattttc tatcagcata tcactcccct ttttgagtat
    12541 tgtttaaatc acttacaata tcttgcaact tttcactagc atgatctaga ctattttctg
    12601 ttaaaggttg attcataata aaagatccag tttctttaag caaattcaaa gtatagctat
    12661 ttttagcaaa attatctaat ttatcattta aaaaatcgat tcttgctaca caaaaaacta
    12721 aaattgcaaa aattaaaaag atttttgccc caccaaatat aaagccacca atacgatcta
    12781 aaaaacctag gccacttaat ttgatcaact tagaaagaaa attacctgcc aacaaacaaa
    12841 ctatccaaaa aataattaat atggccaaaa atccagcaaa tccagctaag ctttgatttt
    12901 ctatcttata aaaagtactt tgtataaatt cagccgcttg agttgcgtat tttgaagcaa
    12961 taaaaacacc accaataata cccaaaagtc caaaaatttc ttttatcaaa ccattgataa
    13021 tacccttaag ccctaaaagc aaggtaaatc ctaaaataaa agcatcaaac caataaaaat
    13081 tcatttcaat cactctctga ttttttttgt tttaaattta ttctacaaat aagcactaaa
    13141 tgctaagtta atcattctat gattttagga acaacaaaaa aatgttcttg tttttttgga
    13201 gcacaatcta aaacctcatc aataacattg ctatttctta tctcatcaat cctcaaagga
    13261 gctccacctt ttatagtgct tacagtaatc tcttgggaat ctagatcaag ttcgtttaat
    13321 ttttcaacaa aattcacaat ttcacttaac tgtacaatgg tttcatttct gttttttgtt
    13381 atttgtaaag cacttaattt ttcaagcttg cttaataatt tctcatctat ttgcatttct
    13441 taaaccttaa taaaaaagtt aaaattttga aaattatatc ataaaaagct ttaaattgtt
    13501 taggatattt tgcaatttat atgatacaat accataattt ttctatacaa aaataaaaat
    13561 attttttcaa ggataaattt tgggactaaa agataattta aaagctgtta aaaatgaact
    13621 taacacagaa gaacaattta tagaaaattt tatcaaagga gagagattta tacgcaagta
    13681 taaattttat atatctgctg ttgtgataat tttagttgct tggtttgctg gaaattttat
    13741 aatctcaaaa ataaacgatt ataaaacaaa agaagcaaat gaaatttatg ccaatctaat
    13801 acaagatcct agcaataaaa atcttttaga acaacttaaa aataaaaata ccaatcttta
    13861 cgctatcttt ttactaaaag aaaatattaa tgattttaat aatacagctc tccaaaatga
    13921 actaaaacaa atttataata atgctcaaac aaacacttta cttaaaaata ttattgcatt
    13981 atctttaggg gataaatcga tatttttaaa aaattatgat aaattattag aagcttacaa
    14041 acttttagag caaaataaaa tcgaagaagc taatgtttta ctttctcaga taaaagaaaa
    14101 ttcaagttta aatcaaatag ctaaaaacct caaacattat caaggcatta cacaatgaaa
    14161 aaaatatttt taacactatt ttgtttaata tttctatgtg cttgtggcac taaaagacaa
    14221 tattttgaac cagaacaaac caatggagat ttaagccaca atggtaattt aaaaagcaaa
    14281 atcgttgact ggaatctagt ttctgcaaaa cttagcaata atactgctat attaaaaaat
    14341 aatatttcta tagataagtt taaacttcct aaaaattata tacttatagc ttatcaagat
    14401 ggagaatatt ttaccgcaga tgacaatggg aatttaaaaa tttttgacaa ttcttataat
    14461 gaaatttata attttcaatt tgacgctagt gttgtaggag tagcttctaa tggagatgat
    14521 ttagcccttg tacttgcaaa taatactata gttcttgcaa atcgttcttt gggtattaaa
    14581 ttcagtcaaa ccctaacctc agctccagct caagacagtc gtaccgctaa tcctatattt
    14641 ttagacaata tcatcgtata tccaacgcta gatggcaaaa ttttaattct ttcaagaaac
    14701 aatcttcaag tcattaaaga tgtggttatt tcagcagaaa attttttcaa caatgtaatc
    14761 catctaagtg taattggaga taaacttata gcagcaacag ctaaaaaaat cattgttgta
    14821 agccctgcta gaactcttta tcttgacgct gacataaaag atgttgcact tagtgatgat
    14881 ggtattttta tactagaaaa agatggcact attattaaaa ctgattataa cttaagaaaa
    14941 attgcagaaa aaaaatttga atttgctatt tttgtaaaaa gcaatatata caataattat
    15001 ttatatattt ttgaaaaaac aggctatctt atcaaaatga atctaaattt agataataca
    15061 caagtattta aactttcaga agctgttgat aaaatttctt tcatggggaa tggtaaattt
    15121 tactacggag ataaaatttt agatttgcta tgataaaaat tttagaacaa acaataaagg
    15181 ctttaaaatt aaatttaaag ccctatgact taagtatgtt gactagaaaa aaaagttata
    15241 tttgcgccaa agatcaaaat aacattcttt ttatgtatac aggaaaaaca aaatttttaa
    15301 tgaaagatgc cttattttta gaaaatctag cacagcaaat taacataaat aacaaatatt
    15361 tttttagcat ggcttctctt tgctctaaag caaaaaatca tctagaaatg aaaggattta
    15421 atatctatgt tgctctgtga tattgggaat tcaaatgcta atttcctaga tgataacaaa
    15481 tattttactc ttagtataga tcagttttta gaatttaaaa atgaacaaaa aattttttat
    15541 atcaatgtca atgaacatct caaagaacat ttaaaaaatc aaaaaaattt tatcaatctt
    15601 gaaccttatt ttttatttga tacaatttat caaggattag gaatcgatcg catagcagct
    15661 tgttatacta ttgaagatgg agttgttgta gatgcaggta gtgctattac aattgatatt
    15721 atttctaatt ctatacatct tggtggtttt atcttgccag gtattgcaaa ttataaaaaa
    15781 atttatagcc atatttcacc acgattaaaa agtgaattta acactcaagt tagtcttgat
    15841 gcattcccac aaaaaaccat ggatgcttta agttatggtg tttttaaagg aatttaccta
    15901 ctgataaaag atgccgctca aaataaaaag ctttatttca ctggtggaga tgggcaattt
    15961 ttagcaaatt atttcgatca cgcaatttat gataaacttt taatctttcg aggaatgaaa
    16021 aagattataa aagaaaatcc taatttactt tattaaaaat gttacaaaaa ttctcattga
    16081 tatcaaacct taatgaaatt taactttttg taaaacaaat tcaattaaac ttctatttag
    16141 aaaaaagttt attaaaataa aaaaaggaaa aacaatgagc caacaagaat ttgatgtgct
    16201 tgtcatcgga gctggaattt caggagcagc attattttac gagcttgcaa gatatacaaa
    16261 tattaaaaat attgctttga tagaaaaata taatacagct gcaacattaa attctaaggg
    16321 aacgagtaat tctcaaacca ttcattgtgg agatattgaa accaattata ctttagaaaa
    16381 agcgcgaaaa gtaaaaagaa cagctgatat gatagttaaa tatggactca tgcaaaatgc
    16441 gcaaaataat ttcatgtttt ctcatcaaaa aatagctcta gctgttggag atatagaatg
    16501 tgattatatg aaaaaacgct atgaagaatt taaagaactt tatccttata taaaattttt
    16561 cgataaagca aaaatcaaac aaattgaacc caaggttgtt ttaggagaag attgcaatca
    16621 agatagacct gaaaatatct gcgccatggg tgttgaaagc ggcgaggttt ttacaactgt
    16681 agattttggg aaaatgagta taaatctaat agaacaagcc caaaaacaaa ataaaaatac
    16741 ttttgttgcc tttaatcaag aaattgttca catagaaaaa aaggatgata tttttatatt
    16801 aaaaacctca aatcatcaag aataccatgc caaaagtgta gttgttaatg ctggggcgca
    16861 ctctttatat ttggcgcata aaatgaattt aggtatggat aagtcttgtt ggcctgttgc
    16921 aggaagtttt tatttaacca aacaaaaact tttaaatggc aaagtttata tggtgcaaaa
    16981 tcctaaactt ccatttgcag ctcttcatgg agatcctgat ttgcttgctg atatgaacac
    17041 tcgctttgga cctactgcac ttgttattcc aaaactagaa cgttatcatg gactaaaatc
    17101 agttccagaa tttttcgaag cactaaaact tgataaaact gttttaaaag taacttttaa
    17161 tatgtttaaa gatgcaacaa ttagaaatta catcttttat aattatcttt ttgaactacc
    17221 ttttattgat aaaagcttat ttgttaaaga tgctaaaaaa atagttccaa gtcttaaaac
    17281 aagtgatatt tattatgcaa agggttttgg aggcgtaaga ccacaagtta ttgataagac
    17341 taaaggggaa ttaatgctag gtgaagcaag catcacagag acccctggca ttattttcaa
    17401 tatgactcca agtcctgggg caacaagttg tctaggaaat gctgaaagag atgcaaagct
    17461 tatatgtaat tacctaggaa tggaatttaa cgaagataaa ttttcttcag aattattgta
    17521 atcattttgt ttctattttt agctacaata atttcaaaag gagtttacca tgcttaaaaa
    17581 aacaaaaatt gtagccacag taggtccagc aagtgaaaag gaagaaattc tacgccaaat
    17641 gattatcaat ggtgtaaatg ttttccgttt aaacttttct catggaacac atgagtatca
    17701 taaaaaaaac ttagatacca taagaagagt agctaaagaa ttgcatactc gtattggaat
    17761 tttacaagac attagtggtc ctaaaattcg tacaggtgaa cttaaagaac catttgaatt
    17821 aaaaaagggt gatagacttg atttttatcg tgaaacaatt ttaggggaga agattgctca
    17881 aaatcattat aaaatcagca tcaatcaaaa atccatttta gatatgttaa aaattgatga
    17941 atatatttat ctatatgatg gatcaattcg tgctaaagta gtaagcatag ataatcaaaa
    18001 aattgaaacc attatagaaa atgatggttt tttaaactca aataaaggta ttaattttcc
    18061 gaatactaaa atcaatattg atgttattac acaaaaagat aaaaatgatt tactttgggg
    18121 tataaaaaat gaagtagatt ttttagcaat atctttcgta caaaatgcac acgatattga
    18181 tgaagttcgt gaaattttag cacaaaataa cgcaaaaata tctatttttg caaaaattga
    18241 aaaatttgat gcagtagaaa atattgatga gattattaaa tctagcgatg gcataatggt
    18301 tgcaagagga gacttaggta ttgaggtacc ttattataaa gttcctaata tccaaaaaga
    18361 aattatacaa aaagcaaaca atgcctctaa gcctgttatt actgcgactc agatgctttt
    18421 ttcattagcc aaaagcaaaa ccgccacaag agctgaaatt tcagatgttg caaatgctgt
    18481 tttagatgga acagatgcag taatgctaag tgaagaaagc gccgttggta tagatcctgc
    18541 aaacgctgtt gatataatgt gccaaactat aatagaaaca gaaaaacgct atccatataa
    18601 caaatttaat gattttaatg atttagacaa tacagataaa atcatgcgtt cttcagctca
    18661 tcttgcaaca gatcttaacg ctgatgctat tttttcttta acaagtagtg gaaaatctgc
    18721 tattaagatt gcgagatatc gtccaaatat agaaatcata gcagtagggc attctgaaaa
    18781 aaccttaaac tctttaagta tagtttgggg agttaatcct gcgatcttgg ttaacaaaag
    18841 taatgaactt acagaattat taaaagactc tgtaagatca agtgttgaaa aaggttttat
    18901 ggatgaagac aaatgctatc ttctaactgc aggctttcca acaggagtag aaggtactag
    18961 caatcttatc cgcattctca ataaagagca aattgcttat tatctacaat aaaacattaa
    19021 attcctttga aaataaggaa tttaatgtcc ttataaattt tttaagtcaa aagtcgatat
    19081 aaattaaagc ctcacacaaa ggagcaaata tgcaagtgaa tactttttca aatatcgcta
    19141 gcatggcaca aacacaagtt agcaataaga aggcagatga tgctaaggaa aacacaaaag
    19201 acaaaaatgt tcaaagtgct aattctagca aggatgtaga taaaaatacc cttgaaaaat
    19261 taaatgcact tggtggaaag ggcattacac aaatttacct agttcagttt caacagcaaa
    19321 caatgaatgc tgtaataggt tcgagcaatg cccaaactgg actagatagt cttttaaatg
    19381 gtgccaattt agatactgcg aaatctatac ttacaaatat tgattttgca tccttaggct
    19441 acagtggcaa aaatccactt gatatgaata cagatgaact tcaacaactt gtaagtgaag
    19501 atggtttttt tggagtggaa aatacagcca atcgcatcgc ggattttgtt attaaaggcg
    19561 gtggcgacga tgttgaaaaa ttgaaaaaag gtcttgaagg tatgaaaaaa ggatttgagc
    19621 aagcagaaaa aatgtggggt ggagaacttc ctcaaatcag tcaagataca atagatgcgg
    19681 cacttaaaaa agttagcgat cgcattgatg aactaggcgg aaaaactcta gatcttcaag
    19741 cttaactaaa aatgcttaga aatttctaag catttttagt tgttattaat atcaaaagta
    19801 aaaaattcac tcttaaaatt attaggtaaa gttttatact gagatatcgc agcttcatag
    19861 ttctttactt cttgatacaa cataccaaga gctgctttac tttctttgtt atttttatct
    19921 gtaagtttag aaagctgcaa aagcgctata gctgaatttg gattatttgc acctacggct
    19981 gctacggctg ctaaaaataa agttttagta tctttagctc cataatcatc aatcaaagaa
    20041 ttgtaaagcg cataagcctc ctcgtattgc tgtgcaaaaa tatccaaata agctaaagtt
    20101 tgcaaaatac cctcatcttt tgctcctgaa acattaatca actctttaaa tttctgtctt
    20161 tctaaattta aaagccctgc aatatgcatt aaattaacat aaaattccct agcgatactt
    20221 ggcccaccaa aaacactacg ataatcaagt tttaaatttt taaaatgaat ttgagcattt
    20281 tgagcatatt ctttaatatt taaatttgaa tttaaagaat taaaatacaa aatatttgcc
    20341 aaaatatctt caggcaactc tgaacgcaat ttagcaattt tcacatctac ttgattatta
    20401 aggttattat ttttagcaac aatagcttca aaaatcaaac tcaaaggcgt gtcttttttt
    20461 gtttcatcta aataaggaag catagaaata taattattat taactaaaaa taacatactt
    20521 ttttgcatat tagctttaaa attagaatca gcagctatat tatcaagaat ttcattgtaa
    20581 agtttagttg tatcaatatc aattaatttt gcacaaaaca tagcaaaagc acctgctaag
    20641 taatttttag gattaagatg atatgaactt gaaaaatgct tataagcaag ttcataattt
    20701 tgcatttggg cataagttaa agccaaatta taatgtaaaa tactatgttc tggataatcc
    20761 ttgataagtt tttgaaattc ttggttagca aggcgtaact tctgatttaa tgcatagtta
    20821 ataatattgg caatttttac attggtagat gaaagagcct tgcttgtatt aagataaact
    20881 cccgcatcag cactatcatc aacgaaatct gtaacattag cttttttaat atataaagca
    20941 gcctgcttac tatcaaaaac ttgataaggc gcaaaataaa aaagcaaatc gaattgatct
    21001 ttttgttttt ttaacaaatc ttttgaaaaa gaattttgag caactgctat attaaaaaga
    21061 tccttattta aacgaacttg aattttataa gcatctaaaa tcttatatct atctttatca
    21121 ttatcataag aattttgcaa gcgcgctaac atatcttgat aatttcctgt tttaatatca
    21181 accaatgtta aagccgccaa actttgatta aaatctcttt caattttcat cgctgtactt
    21241 aaagcgactt tagctttagc atattctcct attctagcgt ataaaagacc taaagataaa
    21301 ctagattcaa aattgccttg agaatttaat tgctgtatag ccttggaatc aaagtccatt
    21361 tttgcataaa ttttagcaga caaatacttt gcaacatcag aatacggctc cacatctgtt
    21421 ctttgtaaca tttgtaaagc ctcagggtaa tatcctttgt aataattaat caagcttaaa
    21481 taataatcat ataattttga ttttccttct tttggaagat acacttgagc taaatcaata
    21541 taatatctaa atttttcctt atcattaagc tttaaagcac aaacagcagc attgatagca
    21601 gctacacttt gattttctcc attggctata gctttcttga agctttcaaa agcttcttgg
    21661 aatttattct cattcatttg agaaacgcct aaattataat tagataaaga ttcgttatat
    21721 acggcaactt gctcataaac ttttaaagcc tgttcaacct caccctttaa atataaagca
    21781 tttgcttttt ggatcatacc atcaattctt tgcatatcat tgtatttata tgattcatca
    21841 ggcataacaa caggttgttc taaaggctta gaagctataa tatctggttt aatttttcct
    21901 tcactaaaag ttaaataaaa aagtgtaaaa actaaaatac aaataatccc caaagataaa
    21961 cccacaagag acataaactt acgatcttta taccaaggcg taggctcttg actttcaact
    22021 tcttcaaaag ttgatacatc ttcaggcgca ctttctcttg taaatttaaa accactatca
    22081 ctattttctt gaggtaattc ttctggcaat gatgcaaatt cttcatcttc tggagcttgc
    22141 ccctcttgcc ctttaaatcc ctctaaactc tcatcaagtc ttggttgatt taagccatct
    22201 tcgggttttt ctagtattat atcttcttgt tcagccatct atactcttta aaaatatttt
    22261 ttcaaagcat caggaatatg aatttttcct tctttatctt gataattttc cataatcgct
    22321 accaaggttc ttcctactgc caaagatgag ccattaagag tgtgaacgag ttcatttttt
    22381 ccttgttcat ttttatagcg aattttagca cgtcttgctt gaaaatcacg acaatttgaa
    22441 accgagctaa tctcacgata tttattttgt cctggaagcc acacttcaag atccacagtt
    22501 tttgctgcac taaaacccaa atctccagtg caaagcatca aatgtctatg tgctaaacct
    22561 aaagaactca gcaaatcact tgcacactca agcatttcat taaacacact atcactttgc
    22621 tcaggtttag tgatacttac aagctctact ttttcaaact ggtgttgtct gataatacct
    22681 cttgtatcac gccctgcact acctgcttct tttctaaaac aagcgctata acaagtcatt
    22741 tttataggta aagtttcact cgctaaaatt tctccactat aaagattggt tactggaatt
    22801 tcagaagttg agattaaata caaatcctca tcatctacct tatacatatc ttctttaaat
    22861 tttggcaact gacccgtccc aaacatagta gcaccattta ccaaaaaagg tacattaaca
    22921 aactcaaatc catgacttct attaaaatct atcatataat ttaccaaagc acggcttaat
    22981 aaagctcctt cgttcttaag cacacaaaaa cggctttgtg aaatttttac cccacgcaca
    23041 aaatcaagcc aatttaaact ctcgcctaat tcaaaatgtt cttttggagt aaaatcaaag
    23101 ctaggcggat ttaatacttt tttaagctcc acattttcat cttcatcttc acccacaggc
    23161 acacattcat caggaatatt tgggatggca tgagcgattt cttcaagctc attttctaaa
    23221 gcatttactt taacgctttg ctcattaatt ttgcttttat tttcgcttaa ttttgctttt
    23281 aaactttctt tatcttcggc tgtagcaagc tctttactga atttattttg aaaagcttga
    23341 aattcttcta aagc
//
LOCUS       DARBAC010000013        23176 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.013, whole genome shotgun sequence.
ACCESSION   DARBAC010000013 DARBAC010000000
VERSION     DARBAC010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23176
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.013"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            36..812
                     /gene="surE"
                     /locus_tag="SB799_000363"
     CDS             36..812
                     /gene="surE"
                     /locus_tag="SB799_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEG0867630.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKANDE"
     gene            802..1461
                     /locus_tag="SB799_000364"
     CDS             802..1461
                     /locus_tag="SB799_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEG0867631.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLDKK
                     A"
     gene            1445..1855
                     /locus_tag="SB799_000365"
                     /pseudo
     CDS             1445..1855
                     /locus_tag="SB799_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            1891..2637
                     /locus_tag="SB799_000366"
     CDS             1891..2637
                     /locus_tag="SB799_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class D beta-lactamase OXA-184"
                     /protein_id="HEG0867632.1"
                     /translation="MKKILLLFSLFYSFALANDKLKDFFKDYNTSGVFITFDGKHYAS
                     NNFKRAKEPFSPASTFKIFNALIALDNGVVKDTKEIFYHYKGEKVFLPSWKQDASLSS
                     AIKRSQVPAFKELARKIGLKTMQESLNKLSYGNTKISKIDTFWLDNSLQISAKNQADL
                     LFKLSQNSLPFSKKSQEEVKKIILFKEDKIQKIYAKTGFNDGINLAWIVGFIESKNKI
                     LSFALNVDIKNIKNLKIREELLEKYIYSLN"
     gene            2750..3568
                     /locus_tag="SB799_000367"
     CDS             2750..3568
                     /locus_tag="SB799_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEG0867633.1"
                     /translation="MSMVTYAFLALALVLLSFNKIKTAYLFFIISVFFAYYFKIINIT
                     FIVINIIAFGLALYYRYKKSLILELILFVFCIGLFLHFIPGINNIKVLDKVYASENSA
                     PFTLYFNFDKPIGVFILFLLLPMLFTNENYTKVSLLKWILLILSPLFLLSIPWYFNVL
                     KFEFSLPWWLPYFLFSNVLLVALVEEVYFRGYLQQRLSQILNPNLALLIASIAFGLIH
                     YRSGILMIIFASLAGIIYGLAYKYNKSLWISVLFHCGLNLIHLIFFTYPFYLKS"
     gene            complement(3581..4453)
                     /locus_tag="SB799_000368"
     CDS             complement(3581..4453)
                     /locus_tag="SB799_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEG0867634.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNVKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDIKIGDT
                     LVLSVKAFNPLILK"
     gene            complement(4450..5124)
                     /gene="modB"
                     /locus_tag="SB799_000369"
     CDS             complement(4450..5124)
                     /gene="modB"
                     /locus_tag="SB799_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEG0867635.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLITFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFIN
                     KKMSFQ"
     gene            complement(5117..5518)
                     /locus_tag="SB799_000370"
     CDS             complement(5117..5518)
                     /locus_tag="SB799_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HEG0867636.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKI
                     GVSVELLFKEHELCFSASKTLLSVENSFLAKITKIKKGELLYQVFFDFKGNELSSIIT
                     KEKALELEICKNQEWLCFVKANDIVLRSHSA"
     gene            complement(5515..6264)
                     /gene="modA"
                     /locus_tag="SB799_000371"
     CDS             complement(5515..6264)
                     /gene="modA"
                     /locus_tag="SB799_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0867637.1"
                     /translation="MKKFVVFFGILLFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKIYVLGVL
                     ALYSLDENLLQGGVENLKEKAGKITHLSIANPKVAPYGVAAKEVLENLDLNELFKDKI
                     VLGENISVPVLHVDSKNADIAIVAYSLVSPINHPKGKAIIIDTKYFSPLEQSYVITKY
                     AKDKKLAFEFSEFIGSSKAKEIFKKYGFSTP"
     gene            complement(6315..7001)
                     /gene="bioC"
                     /locus_tag="SB799_000372"
     CDS             complement(6315..7001)
                     /gene="bioC"
                     /locus_tag="SB799_000372"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEG0867638.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFEKVFEFGCG
                     RGELSKKLQNFITFDEYLKNDILDFKENSNILIFDMNEISKQDLSKEKFDLIVSNATL
                     QWLDLKQIIPSLRDMLNQNGILLLSTFAKQNLKEIKQSTGFGLNYFSLNELEQIFKIY
                     FNEVKITQELVELSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            complement(6998..7609)
                     /locus_tag="SB799_000373"
     CDS             complement(6998..7609)
                     /locus_tag="SB799_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEG0867639.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHPSHFSHLKSDKNVILFYDY
                     ENFDLNFNFKAFDELFLIAFSMGVCVANRVLKELNFKQKIAINGTNLGIDKSKGIHPT
                     IFKKTLQNFKLEHFKKALFKERKSLAKDFIFKDEKALKIELEKLFDFALIKQEENLLW
                     DKVYSSKEDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEL"
     gene            complement(7606..8748)
                     /locus_tag="SB799_000374"
     CDS             complement(7606..8748)
                     /locus_tag="SB799_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HEG0867640.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLAGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEELESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLADKFIHASMIDGLRLSGADFFRFHHKNMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKKRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKAIASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIMELL"
     gene            8816..10099
                     /locus_tag="SB799_000375"
     CDS             8816..10099
                     /locus_tag="SB799_000375"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEG0867641.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWFYDFD
                     DKVYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSTRLCEKV
                     GRDFNKCFYADNGSSAIEVALKMSFHYHLNKGLKKNKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKTLLLECLSTPVPQGKDYTKELEILKDILEKHSNEICAFILEPLVQCAGNM
                     HMYEAGFIDEAIKLCHDFNVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTKDEIYNAFYAPYSEQKAFLHSHSYTGNTLACAAANAVLDIFENENILE
                     KNQILSTFIQQEFSKLKKFDFLGNFRTCGMISAFDILSHKHERVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVVESLEQIFKEF"
     gene            complement(10086..10691)
                     /locus_tag="SB799_000376"
     CDS             complement(10086..10691)
                     /locus_tag="SB799_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEG0867642.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSENLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALEQRNINLLALVMMGKKDTFQ
                     DDFIKNYAKIPIINLDFFDENSILNQDFKEQMQEILQLKIP"
     gene            complement(10701..11015)
                     /locus_tag="SB799_000377"
     CDS             complement(10701..11015)
                     /locus_tag="SB799_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0867643.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALMVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(11018..11356)
                     /locus_tag="SB799_000378"
     CDS             complement(11018..11356)
                     /locus_tag="SB799_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0867644.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWQYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            11490..12026
                     /locus_tag="SB799_000379"
     CDS             11490..12026
                     /locus_tag="SB799_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEG0867645.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            12023..12568
                     /locus_tag="SB799_000380"
     CDS             12023..12568
                     /locus_tag="SB799_000380"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEG0867646.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHTKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            12570..13628
                     /locus_tag="SB799_000381"
     CDS             12570..13628
                     /locus_tag="SB799_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEG0867647.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAIVTFVAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            13672..14880
                     /gene="lysA"
                     /locus_tag="SB799_000382"
     CDS             13672..14880
                     /gene="lysA"
                     /locus_tag="SB799_000382"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEG0867648.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKDECESDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            14882..15649
                     /locus_tag="SB799_000383"
     CDS             14882..15649
                     /locus_tag="SB799_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HEG0867649.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLVIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            15637..16710
                     /gene="pheA"
                     /locus_tag="SB799_000384"
     CDS             15637..16710
                     /gene="pheA"
                     /locus_tag="SB799_000384"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEG0867650.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            16700..17794
                     /locus_tag="SB799_000385"
     CDS             16700..17794
                     /locus_tag="SB799_000385"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEG0867651.1"
                     /translation="MKFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAINDDEFTE
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            17846..19528
                     /gene="fliF"
                     /locus_tag="SB799_000386"
     CDS             17846..19528
                     /gene="fliF"
                     /locus_tag="SB799_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEG0867652.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIIVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDIQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            19528..20556
                     /gene="fliG"
                     /locus_tag="SB799_000387"
     CDS             19528..20556
                     /gene="fliG"
                     /locus_tag="SB799_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEG0867653.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            20564..21394
                     /gene="fliH"
                     /locus_tag="SB799_000388"
     CDS             20564..21394
                     /gene="fliH"
                     /locus_tag="SB799_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEG0867654.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENANISLNDEKAVEENQAIAPTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFAKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            21387..>23176
                     /locus_tag="SB799_000389"
     CDS             21387..>23176
                     /locus_tag="SB799_000389"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEG0867655.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFACVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDAKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVE"
BASE COUNT         8331 a         3146 c         3848 g         7851 t
ORIGIN      
        1 taaaatccag atttttatct tttgcaagga agacaatgaa agaaattctt atcactaatg
       61 acgatggtta tgaaagcgaa ggacttaaaa aactcattaa gatgttaaca aaagaattta
      121 aagccaagat caccatagta gctcctgcta gtgaaaaatc agcttgttcg cactctataa
      181 ccctaaccaa acctttgcgt tttgttaaag tgggaaaaag attttacaaa cttgatgatg
      241 gcactccagc agattgtgtt tatcttgctt tgcatgcttt atacaaaaag cgtttgcctg
      301 atcttgtaat aagtgggatt aataaaggtg ctaatgtagg cgaggatatt acctactcag
      361 gaacttgcgc aggagctatg gaggcggttt tacaaggaat tcctgctatc gctctttctc
      421 aattttataa aaaaagcgaa aaagaactag actataaaaa tgctttacaa attaccaaaa
      481 aaatcattca aaatattttt gataaaggtt ttcctttgga aaaaaaagaa tttttaaata
      541 tcaattttcc tgcaaaatca aaaatcaaag gcattaaaat ttgtaaagca ggcaaaaggg
      601 tttataattt tgaagcccat tcaaatgtca atccgagagg agtagagtac tattggcttg
      661 cagcggcgaa tttagacttt gaagatgaga aaaatagcga tattgcctta cttaaaaaag
      721 gctacgctac aataacccct ataatgctag atcttacagc ttatgaaaga atgaaaaaag
      781 ttaaaaaatg gttaaaggca aatgatgaat gatagattta cacgtataaa atggctagtt
      841 ggagaagaaa aatttcaaaa aatttcacaa acaaaagttt tggtttgcgg acttggtgga
      901 gtgggtggaa tttgcgttga tgcgctttat cgtagtggtt ttaaaaacct tactttaatc
      961 gatgcggata aatttgaaat cactaatcaa aatcgccaaa ttcatagcga aaatataggc
     1021 gaagaaaagg ctaaagtatt tgaaagaatt tataaggtta aaggtatagt cagtaaaatc
     1081 gatgaaaatt ttttaaaaaa ttttgattta agcgagtttg atcttatcat agatgccatt
     1141 gatgatattc ctgcaaaagt agctttggct catcttatag attttaaaaa acaaattttt
     1201 atctcctcaa caggtggagc tagaaagctt gatccaacac gcattaaaac tacaagtatt
     1261 tttaaaactc acggcgatgc tttagcgaaa aaatttcgtt atgagcttag aaaatcaggc
     1321 tttaagggaa attttgatgt ggtgttttct gatgaagaag ctcattgtaa agaccttggt
     1381 tcatttatgg gtgtaacagc ttcttttgga cttgctttag cttctttggc tttaaggaaa
     1441 gtacttgata agaaagcttg atataaaaga tttagcttct tgtatcaagc tttgtaagca
     1501 aaacgtattc actctttgta aaaatgatta cacaaaagaa caaattcatg cttggattaa
     1561 tataaaccaa aaaacttgag aagaaaaatt tcaaaatcaa ctaggctttg tttatgaaga
     1621 aaaaggccaa atcatatatt ttataagtat aaatattaga agaaaaaaca ctcgatcttt
     1681 gctttattca tgcaaactat gctcatcaag gtttattaaa gctttattgg aatttactct
     1741 taaaagctat ccttatagtg aaatttacgc ttttgctagt tttagtgtta aaaatttctt
     1801 tttaaaagca ggatttaaaa tcatcaaaga aaacattgtt ataatagacc aataagaatt
     1861 aaaaaatttc ttcatgaaaa aggaaataaa ttgaaaaaaa tacttttact ttttagtctt
     1921 ttttactctt ttgctttggc aaatgataaa ttaaaagatt tttttaaaga ctacaataca
     1981 agcggagttt ttataacttt tgatggaaaa cattatgcaa gtaataattt taaaagagct
     2041 aaagaacctt tttctcctgc ttcgactttt aaaattttta atgctttaat tgcgcttgat
     2101 aatggtgtag ttaaagatac aaaggaaatt ttttatcatt ataagggtga aaaagtattt
     2161 ttgccctctt ggaaacaaga tgctagttta agctcagcca taaaacgctc tcaagtgcct
     2221 gcttttaaag aattggcaag aaaaatagga cttaaaacca tgcaagaaag cttaaataaa
     2281 ctttcctatg gaaatacaaa aatttcaaaa atcgatacct tttggctgga taattcttta
     2341 caaatttctg caaaaaatca agctgatttg ctttttaaac tttcacaaaa ttctttacct
     2401 ttttccaaga aaagtcaaga agaagttaaa aaaattattc tttttaaaga agataaaatc
     2461 caaaaaattt atgctaaaac aggttttaat gatggtataa atttggcttg gattgttgga
     2521 tttatagaga gtaaaaacaa aattttatct tttgccttaa atgttgatat aaagaacatt
     2581 aaaaatctta aaataagaga agaattgcta gaaaaatata tttattcttt aaactaatta
     2641 agcttttata agaaattgtt taatgatcaa aatatcgcaa tataatagtt tttaagaaaa
     2701 atagatataa aatactgatt atattaaatt tatttaagag aaatgttaga tgtctatggt
     2761 aacttatgct tttttagcac ttgccttggt tttgttgtct tttaataaaa ttaaaacagc
     2821 ttatttattt tttataatta gtgtattttt tgcttattat tttaagataa ttaatatcac
     2881 ttttatagta attaatatta ttgcatttgg gttggcttta tattatagat ataaaaaatc
     2941 acttatttta gaattgatat tgtttgtttt ttgtataggt ttatttttac attttatacc
     3001 aggaattaat aatataaaag ttttagataa ggtttatgca agtgaaaata gtgcaccatt
     3061 tactttatac tttaattttg ataaacctat aggtgtattt atattgtttt tgttattgcc
     3121 tatgttattt acaaatgaaa attatacaaa agtttcgtta ttaaaatgga ttttattaat
     3181 tttaagtcct ttatttttat tatctatacc ttggtatttt aatgttttga aatttgaatt
     3241 tagcttacct tggtggttac cctatttttt attttctaat gttttattgg tagctttggt
     3301 tgaagaagtg tattttagag gttatcttca acaaagactc tctcaaattt taaatccaaa
     3361 tttggcttta ttgatagcaa gtatagcttt tggattgatt cattatagaa gtggaatttt
     3421 aatgattatt tttgcgagtt tagctggaat tatatatgga ttagcatata aatataacaa
     3481 aagtttatgg ataagtgtat tatttcattg tggattaaat ttaattcatt tgatattttt
     3541 tacttatcct ttttatttaa aatcataatc aagttatatg ttatttaaga attaaaggat
     3601 tgaaagcttt tactgaaagt acgagagtat cgcctatttt tatatcttga taagctttta
     3661 gaaattcctc ttcactaaga gtgattttaa taatatcttg atttaaaagc aaggttaaaa
     3721 ccactaaaat atcacttttt ttaatttcta gcaaagttgc acttaagcgt aattttgcgc
     3781 tgatatttga atgagtaaaa aattcatttt taggaaaatc tttaataatt tttccgtttt
     3841 taagctctaa aattctatga cttaacttat aaatttcagc tagatcatga cttaccaata
     3901 aagtacttat tttaaaatac tctaaaatct tggttaattc atcttgtaaa ttggcacgca
     3961 ttttaaaatc caaagcactc aaaggttcat ctaaaagcaa gatttttggt tctcttgcta
     4021 aagctcttgc taaagctact ctttgtgcct gccccccgct taaatgttta ggataaattt
     4081 tagctaaatt ttcaagcttc attaaggcta aaagctcgct aacctttgct ttagaactag
     4141 cggcataggc gatgttttct tttacattca tatttggaaa aagcgcataa tcttgaaaaa
     4201 caaaaccaat ttttcttttt tgtaaagcta aactaaaatt ttttgaagaa tcaaaccaaa
     4261 gttcattatc tacttctata cgccccaatt taggctttat aagtcccgct atgattttta
     4321 aaagagtggt ttttcctgct ccactttcgc caaaaagtgc agtaattttt cctgattcta
     4381 tatctttttt aaaatttaaa tccagtcttc ctttagcggt attcatagga tgattgatat
     4441 caattcttat cattgaaaac tcattttttt attgataaaa taaagactaa aaagtactaa
     4501 aaaagaaaaa ataaacaata taaaagcata ttgatgggct aagctatagt ttaagatttc
     4561 aagttcatca taaatagcta tactagccac taaagtttca ccttgtttat gtcctcctat
     4621 catcatcact actccaaatt cacccacagt atgagcaaaa ctcatcgcac aagcactaaa
     4681 aattcctgct ttagaattag gtaaaattac tctaaaaaga gtataaattt tacttttacc
     4741 taaactataa gaagcatcga gcaaatttgg attaatcgat gaaaaggcac tttgtaaagg
     4801 atttaccata aaaggcaaag aaaaaatcaa agaagcaaaa acaagacctt caaaactaaa
     4861 aaccaaagaa agattaaaat attcttttaa aacttgccct aaaaaactat tagccgaaaa
     4921 agttataagc aaataaaatc ccaaaacact aggaggtaaa atcaaaggca aagaaataaa
     4981 gctttgaagg attgttttaa aaggaaaacg cacaaaactt aacaaataag ctaaaaatac
     5041 accaataaaa aaaagaataa aagtcgtgat aaaagcaagt ttaaaagtaa gataaagagt
     5101 ttgtaaaaaa gctggatcaa gcactatgac tccttaatac aatatcattt gcttttacaa
     5161 aacaaagcca ttcttgattt ttacaaattt caagttctaa agctttttct ttggtgataa
     5221 tactagaaag ttcattacct ttaaaatcaa aaaatacctg atacaaaagt tcgccttttt
     5281 taatttttgt aattttagct aaaaaagaat tttcaacact taaaagagtt ttgcttgcac
     5341 taaaacaaag ctcatgctct ttaaaaagaa gttctacact cacaccaatt tttaaatttt
     5401 ctaaagattt taattcaagc attaaaacac taaaaatcac ttctttagaa agtattttaa
     5461 caataactat atcctcttga tttaaaagct cacaaatttg tccttttata aggttcatgg
     5521 tgtgctaaat ccgtattttt taaaaatttc ttttgctttt gaagagccaa taaattcgct
     5581 aaattcaaag gccaattttt tatccttagc atattttgtg ataacataac tttgctctaa
     5641 agggctaaaa tactttgtat caattataat agccttaccc ttaggatgat taataggaga
     5701 aactaaagaa taagccacta tagctatatc tgcattttta ctatctacat gtaaaacagg
     5761 cactgagata ttttcgccta aaacgatttt atccttaaaa agctcattta aatccaaatt
     5821 ttcaagcact tctttagccg ctactccata aggagctact ttaggattgg ctatgcttag
     5881 atgcgtgatt ttacctgcct tttcttttaa attttcaacg cctccttgga gtaaattttc
     5941 atccaaacta tacaaagcca aaactcctaa aacataaatt tttggcttta ttaaggcatt
     6001 tttatcatca taaatagcct tagcatattt agtatccgct gaaaaaaaga gatcaaattc
     6061 tctcccttgt tttaaaagct cataatattt tccagaagca ccaaaaacca attctatttt
     6121 atcttctgga tgtgttttca aaaactcatc tttaacttca ctcatcgcct ttgaagctga
     6181 agaagctaca aaaatactta aattttgtgc atttaaacac gaaacaaaaa gcaaaatccc
     6241 aaaaaatact acaaactttt tcatttagtt ttccttgtgt aaaaatttaa tttttggatt
     6301 ataacacaaa aaattcattt tatatcattt ttgcataaaa taaatacagg atgataagtg
     6361 agtttgtttt gaaatttttc ttcaaattct tttaaaaaac ctttatttaa aggataaaaa
     6421 cctaaagaat ttactccgct taactttaaa tgtctaaaaa catctaaagc attatcaaag
     6481 cttaattcta cgagttcttg agtaattttt acttcattaa aatagatttt aaaaatttgc
     6541 tctaattcat ttaagctaaa ataatttaaa ccaaaacccg tgctttgttt gatttctttt
     6601 aaattctgtt ttgcaaaagt agaaagaagt aaaatcccat tttgatttag catatcccta
     6661 agactgggta tgatttgttt taaatcaagc cattgcaaag ttgcatttga aacaataaga
     6721 tcaaatttct ctttacttaa atcttgtttt gaaatttcat tcatatcaaa aattaaaata
     6781 ttagaatttt ctttaaaatc taaaatatcg ttttttaaat actcatcaaa agtaatgaaa
     6841 ttttgaagtt ttttgctcaa ttcaccccta ccacaaccaa attcaaacac tttttcaaaa
     6901 tgtgaaattt ttaaatcttt taaaatttca caaagtttta aacccatgaa atcttgcact
     6961 tttgcatgtt tttcataatc ttttgctttt aaaaaattca aagctcatcc caagttttaa
     7021 aatgaaaaaa agcaaaatgc ggttcatcta aaaaaatcaa atttttaaaa ctatttttca
     7081 aggcatttgg cggaaaaatt tcatcttctt tacttgaata aaccttatcc caaagcaaat
     7141 tttcttcttg ttttattaaa gcaaagtcaa aaagtttttc aagctctatt ttcaaagctt
     7201 tttcatcttt aaaaataaaa tctttggcta agcttttgcg ttctttaaat aaagcctttt
     7261 taaaatgttc taatttaaaa ttttgcaggg tttttttaaa aattgtagga tgaattcctt
     7321 ttgatttatc tatacctaaa tttgtgccat ttatggctat tttttgttta aaattaagct
     7381 cttttaaaac tctatttgcg acacaaaccc ccatagaaaa agcgattaaa aaaagctcat
     7441 caaaagcttt gaaattaaaa tttaaatcaa aattttcata atcataaaat aaaatcacat
     7501 ttttatcgct ttttaaatgc gaaaaatgac taggatgtga agcaaaccct ccaaatacca
     7561 ctataagttt ttttgaatca ggatttttgc ataaaaattc atatttcata aaagctccat
     7621 tatcctttca agttcttctg tgttaagtcc tgcgtgcaaa gaaaaacgaa ttctagctgt
     7681 attttttggc acagtaggtt ctttgatcgc aggagcaaaa aatccagctt tttgaagttt
     7741 ttgtgaaatt tctaaggctt ttttattttc acctaaaagc aagcaaataa tataagcatc
     7801 acctaaaacg atgtgatttt tttcttgcaa tttactttta aaaaaagtgc ttaaaagctc
     7861 taatttttct ctttctttct taaaataagg cattttttta aaaataaatt gcgtccaagc
     7921 tacattaata ggtggcaaag ctgtagaata aataaaagct ctagctttgt tgatgaaaaa
     7981 ttttttatat ttttcatcac atattataca agcacccatg gaagcaatgg ctttaccaaa
     8041 ggtaaaaacc aaaaaatcca cttcattttc cagggctagt tttttaacaa gccccaaacc
     8101 ctcttcatca aaacaaccca cgctgtgtgc ttcgtctata taaagcttga ttttatcata
     8161 acgcttttta agctcacaca aagttttaaa atcgctaaaa tctccatcca tactaaacaa
     8221 agcttcgctt aaaacgatga tattttcata attttcataa tgtttttgga ttaaactctc
     8281 taaatgattc atatttttgt gatgaaaacg aaaaaaatca gccccgctaa gtcttaagcc
     8341 atcaatcata cttgcatgaa taaatttatc ggctaaaaaa agcgtcttag aaacgctaga
     8401 aagtgctgct atacaagaga tatttaaatg ataaccacta ttaaaatgta aaatttcctt
     8461 atctttaaat ttagtcttta aaaaactttc taattcttca taaatttcaa aatttccact
     8521 caaacttctt gaactcgaac ttgaaaaaaa caaatcttgt tcttttaggg tgtttaaaaa
     8581 ctcagctttt aactctttag aagacgccaa ataaagataa tcatttcctg ctaaatttaa
     8641 aagtttgtga tcttgcttat aaacaaattt attttcatgt tttaaaggtg ttagagttct
     8701 tagattgtga ttttgctcta gatcttgcaa aattttttca agcttcattt ttttcctgta
     8761 aatttaaaaa tttaaagtat tattttgcca aaatattttt aaaaaagaag ttataatgca
     8821 aaatcaaatc ttaaaaaatc tcgatttaaa acacatttgg cacccttgca cacaaatgaa
     8881 agatcacgaa accctacctt taatccctat aaaaaaagca aaaggcgtgt ggttttatga
     8941 ttttgatgat aaggtttata tggattgtgt gagttcttgg tgggtaaatc tttttggtca
     9001 ttgtaatgaa aaaatcgcaa atgccatcaa aaaacaagtt gatgagcttg agcatgtgat
     9061 tttagcaggt tttacacatg agcctatcat caagctttct acgagacttt gtgaaaaagt
     9121 ggggcgtgat tttaataaat gtttttatgc ggataatgga tcaagtgcca ttgaagtagc
     9181 acttaagatg agttttcatt atcatttaaa taaaggtttg aaaaaaaata aatttttatc
     9241 cctaagcaat tcctatcatg gcgaaacctt aggggcttta agtgtgggcg atgttgcact
     9301 ttataaagat acttacaaaa ccttgctttt agagtgttta agcactcctg tgccacaagg
     9361 taaagactat actaaagagc ttgaaatttt aaaagatatt ttagaaaaac actcgaatga
     9421 aatttgcgct tttatacttg aacccttggt gcaatgtgcg ggaaatatgc acatgtatga
     9481 agctggtttt attgatgaag cgatcaagct ttgccatgat tttaatgtgc aagtgatttt
     9541 tgatgaaatt gcagtgggtt ttggacgcac aggcactttg tttgccttgc atcaatgcaa
     9601 acaaagcccc gattttatct gtctttcaaa ggggattaca ggaggattta tgcctctttc
     9661 tgtagtgctt acaaaggatg aaatttataa tgccttttat gcaccctata gcgaacaaaa
     9721 agccttttta cactctcata gttatacagg aaacactcta gcttgtgcag cagctaatgc
     9781 ggttttagat atctttgaaa atgaaaatat tttagaaaaa aatcaaattt taagcacctt
     9841 tatccagcaa gaattttcaa aacttaaaaa atttgatttt ttaggaaatt ttagaacttg
     9901 tggaatgatc agtgcttttg atattttaag ccataaacac gaacgcgtgg gactttttgt
     9961 atttcaaaaa gccttagaaa aaggtttgct tttaagacct ttagcaaata cgatttattt
    10021 tatgcctcct tacatcatca caaaagaaca aatcgtttat gtagtagaga gtttagaaca
    10081 aatttttaag gaattttaag ttgcaaaatt tcttgcattt gctctttaaa atcttgattt
    10141 aaaatgctat tttcatcaaa aaaatcaaga ttaattatgg gaatttttgc ataatttttt
    10201 ataaaatcat cttgaaaggt atcttttttg cccatcatca caagggctaa aagattaata
    10261 tttctttgct ctaaagcttc aatactaagc aaaatatgat taatgcttcc aagatagtat
    10321 tttgctacta aaatcgtagg gtgtttaaaa atattcacaa aatcaatcat agtgtaattt
    10381 tcatccatag gagaaaaaag cccacccgca agctcaataa gtaggttctc actttttggt
    10441 aaaatgatat ctaaggcttt ataatcaagc ttttctttga tttttccaag atgaggagaa
    10501 gctggagttt gcaaaaaaat accttcttta aaaatctttg tttttgggct aaattttgca
    10561 ataaactcac tatctgttgg agttcctgct tgaatgagtt taaaataatc atagttaaaa
    10621 ttcgcacaaa aagctgcgct aaaatgtgtt tttcctacat cagtatgtat tccacttaca
    10681 taaatttgca caaaaaatcc tcaagaaaga aattttaaac ccgctgtaca ggtaataatc
    10741 acagcgatta aaaaaagttt caaaaaactt ttactttctt tataaaaaag cactcctatc
    10801 attaccccac cagcggttcc agctcctgtc catatagcat aagcaacact catagcgata
    10861 ttttgcatac ttaagcttaa aaaagtaaaa gaaaatccaa aacacaccat caaagctaaa
    10921 aggtaaagct tatttttagt gcttacaagt tctttcatga tcaccacgcc aaaaatttca
    10981 caagcagtag ctaaaaacaa ataaaaccat tccatattta agcttccttg cttacccatt
    11041 taagggctat aatacttaaa agtaaaattg ctataagcac aagtttaatt atagaaacag
    11101 cttcgttaaa aataaacatt tcatttaaaa ccaccccaat agtgccaatg cctacaaaaa
    11161 cactataagt aatacttact tcaagtcttt cacaagcttt taaaaagcaa gtaaaagaaa
    11221 tacaaacccc aatggctgtt aaaatatact gccaaatttc tgtagaatat ttaagtccac
    11281 ttacccaaaa gcattctata attccaccta agattattaa aaaccaagct atattaatat
    11341 tgaatttttc attcacatga agccttaaat taacataata tttgtaaaac aaattatatc
    11401 ttaaagaaat taaaagaagc tataaattta cttttccata agccaaaatt agatataatc
    11461 aaagctcatt ttttaagaaa ggacaaaaga tgttagaagg catcgttaga gagagtatcg
    11521 gtagaaaagc tgctaaagct ttaaaaagag atggttatct aatcgcaaac atctatggaa
    11581 aaggattaga aaacatcaat gccgctttta aagtaaatga gtttattaag gaagttcgta
    11641 aaaaaactac tttaattttt gatgtaaaag taggttctca aactttaagc gttgtagttg
    11701 tagattatca aaaagatcct gtaactgcag aacttaaaca tgtggattta aaagttgcac
    11761 aaaaaggtgt gatttctaaa tacatggttc cagttaaaat cacaggaaca gctataggtc
    11821 ttaaaaataa aggtgtttta atccaatcaa aaagaagatt aaaagtaaaa tgtgcagctg
    11881 aaaatttacc aaatttcttc gaacttgatg taagtaaact tgatgtgggt gatgctttac
    11941 ttgttcgtga tattgtagtt cctgcgggag taactatgat tgatgctgat agagtagcgg
    12001 ttgtaggtgt agaaaaagct agatgatttt agtcgtaggg cttggcaata taggcgtaga
    12061 gtatgaaaat acccgtcata atgtcggttt tatgctaatt gacttacttt taaaagaaag
    12121 caattttaca aatcttacaa actctaaatt taaaggagag ctttttaaaa taggttcttc
    12181 tttacttctt cttaaaccta gtacttatat gaataattca ggacttagcg taaaagcagt
    12241 gaatgatttt tataaatgcg aaagaatgat agttatccat gatgatatag atataaattt
    12301 aggagccttg cgctttaaaa aaggcggttc aagtggtgga cataatgggc ttaaaagcat
    12361 agatacttta tgtggaaatg actatgaaag agtgcgtata ggagtgggaa agggtgaaaa
    12421 tgtgatttcc catgttttag gtaaatttaa atccgaagaa gaaataactt taagcaaagt
    12481 tttagagcat acaaaaaaag ctttgcttga gcttattgaa aatgatgatt tgtctgctat
    12541 atcatccaaa tacagcctaa aggcttaaga tgtggatatt ttttcgtttt atttcaggga
    12601 tttatttaaa aaattttttt attatatttt tttctttact tggtttttat tgcggtattg
    12661 atttactctt aaattttaaa gatctaccaa aagccgcaaa tcttgatttg ctttatgtta
    12721 tgtttttatc tttttcggca gtgccttatg tattacccat ttctttgatt tttgctttgg
    12781 tagtttcttt gatttctatg atcagagcaa atgaatttgt aagtctttat gcgttaggac
    12841 tgagtagaaa ttatgttatt ttatttcctt ttttatgggc tttatttttt tgttgtattt
    12901 atataggatt gaattttact tcttttgctt atgcaaatga ttataagaga aatattttaa
    12961 aaaatggcac tattatgaat caaagtggag aagtgttttt gaaatttaac aataattttg
    13021 tttatatttc aaagataaac aatggacaaa atagtgctca aaatataaaa atttttaata
    13081 ttaatgattt aaatttaagc tcttttgtaa gtgctaaaaa tgcccatttt gaaggtgaaa
    13141 gctggatttt gcgagatggt aatattacat tattacctaa aaattatgaa cttgctaatg
    13201 atggtttaaa gatacaagat ttctccgagc ttaaatcact tgagggtttt aaaccaaaga
    13261 ttatagaagg ggttgctagt aatagtgatt attcaatatc tgatgcactt gaaagttttg
    13321 agctttttaa ggcacaaaat gtcaatacag atactcttaa aatcaatctt tataaatttg
    13381 tttttactcc tttttttgca ccatttttaa tgcttattat gtattatttt tttcctgtaa
    13441 tagcaagatt ttttaatctt gctattgtaa cttttgtagc ttttgtagtg actttgatga
    13501 tttggggagt cttgtttttg cttactagat taagcgaaaa tagtgtgatt gcaagtgaaa
    13561 ttggcattgt agtgcctatt ataattttgg gttgtttaag tgcttatatg tattataagc
    13621 atcgataaat taagctttgt gtagtaaaat tataaaaatt aaaggttaaa tatggattat
    13681 aaacaattaa aacaagaatt taatacccct ttttatattt acaattttga tttcataaaa
    13741 gagcgttttt taaatctcaa agaggctttt aaggctagaa aatctcaaat tttttacgct
    13801 gtaaaagcca attcaaattt aagtttgttg caaatgcttg caaatttaga tagtggattt
    13861 gattgtgtga gtataggcga ggtaaagcgt gccttaaaag caggagcaaa agcttataag
    13921 attattttta gtggagtagg aaaaaccaaa gaagagttaa gacaagcttt agaatatgat
    13981 attttatata ttaaccttga aagcgaagct gaaatgatgc ttttagaaag tgtggctaaa
    14041 gaacttaatc taaaggcaag aatcagtatt cgtgttaatc caaatgttga tgcaaaaact
    14101 catccttata tttctacagg attaaatgaa aataaatttg gtgtcgaaat tgatatagca
    14161 agaaaaatgt atctttatgc aaaaaattca tcttttttag agcctgttgg agtgcatttt
    14221 catataggtt cgcaactttt agatatttct cccattcatg aagcagcagg catcgttgca
    14281 aaacttgtaa gagagttaaa agccttgcaa atcgatctta aattttttga tataggcggt
    14341 ggtttgggtg tggcttatga aaaagatgag tgtgaatctg atctttatga ttatgcacaa
    14401 ggtatattag cacaacttca tgggcttgat ttaactatag gaatggagcc tggaaggtat
    14461 ctagttgcta aaagtggaga atttgtttgt tcagtgcttt atgaaaaaca aaataaaacc
    14521 aagcgttttg ttgtagtaga tggagcgatg aatgatctta tacgcccaag tttatacgag
    14581 gcttatcatg aaataatctt accttataat caaggcgaag agagtttatg tgatgttgta
    14641 ggtggaattt gtgagagtgg ggactttttt gctaaagcaa ggtctttgcc tagcactcaa
    14701 agtgatgata taatggttat taaaaatact ggagcttatg gttttagcat gagtagtaat
    14761 tacaatactc gtaataaagt ttgcgaatta gcccttgaag aaggacaggt aagattgatc
    14821 cgtcaaagag aaaattttga agatcaaatc gctttagaag agaaattttt aaaggcttaa
    14881 aatgtttttt ttagatgttc aagggacttt aatttctgat catgataaat ctttaatcca
    14941 tggtgctaaa gaactgatcg attttttaaa tgcaaaaaat cttccttatc ttatcatcac
    15001 taacaataca aaaaaacttg attttttaga aaaattacag caaaaaggat tggttataaa
    15061 agaaaatgct tatattgatc ctttcagcgt tttaaaacac cttttaagac cttgtaaagt
    15121 tgcggctttt ggtgcagatg agtttgtaaa aagtcttgaa aatcttggtt ttgagctcga
    15181 ttttgtaaat cctagtgctg tgcttgtggc tagttatgat gattttaaat ttaaagattt
    15241 tgccactatg atagaattgg ctagaagaga agttagattt atagctatgc acgaaactag
    15301 tatttataaa aaagatggta ggccttatcc tggtgtaggt agcattatgg ctatgcttaa
    15361 aaatgctatt gattttgaat acgaggttgt gggtaagcct agcattgctt tttataaaga
    15421 agctttaaat ttaataagaa gacaaaattc aaaaatcgat tttgaagata ttaaaatcat
    15481 tagtgatgat tttaggggtg acttgcttaa ggcaaaagaa cttggcatga aaaccttgct
    15541 agttttaagc ggcaagataa gcgacacaaa agggcttgat acggatttgc ttgatggagt
    15601 ttatcctagt gtttttgagt ttttaaagga tctaaaatgc caaatttaga agaatttaga
    15661 aataaaatcg atgcggttga tgataaaatt ttagatcttt taaatgaaag aatgacttat
    15721 gttaaaagta taggtgagct taagcaaagt agtgggggaa gtatttatcg tcctgagcgt
    15781 gaaagagcca ttatcaatcg tttaaaaaat gcaaatttag gacttttaga tcaaaatgcc
    15841 atagaggcaa tttatcaaga aatttttgca gtttcaagaa atttagaaat gcctcaaact
    15901 atagcttatt tagggcctga aggaacttat acacatcaag cagcaagaag tcgttttggt
    15961 gcgatgagtc gttatatagc cttggccaat atcgaagatg tttttaaaga gttaagcaac
    16021 aaagaagcaa aatacggtgt tgtacctata gaaaataata ccgaaggtgc agtgggcatt
    16081 actttagatt gtctaggtaa gtataatgag cttaaaattt ttggcgaaat ttatatggat
    16141 attcatcatt cttttgtagg aattaatgaa aatttaaaag aaatcaaacg catttattcg
    16201 catccgcaag gttataatca atgtcgtaaa tttttagaaa gtcatgaact tagtgctata
    16261 gaatttgttc cttcaaaatc tacagctaat gcagcttacc tagcttcgca agataaatat
    16321 gcggcagcaa tttgttctag aatagcggct aagctttata atgtgcctgt actttttgat
    16381 aaaatagaag ataatgcagc caataaaaca agatttttaa ttttaagcga tattaaaaat
    16441 cctaaaatgc caaattgtaa aacttctatt ttagcacaca cagcacataa acctggggga
    16501 cttagctttt tattagagca gtttaaaaaa gaaaatatca atcttactaa gcttgaatct
    16561 cgccctgtaa aatcaaaaga atttttacac agtttttata tagattttga agggcatatt
    16621 gatgatgaaa atgtaaaaaa agccttaaaa gatatacaag agattgtttg gcttggatct
    16681 tatttatcag gagaaaaaga tgaaatttaa tgaattttta aataatttaa gcaattatga
    16741 acccggcaaa gatatagaag ttattgctaa agaatatggt gttaaagaag tgataaaatt
    16801 agcaagcaat gaaaatcctt ttggcacgcc accaaaagct atagaatgtt taagacaaaa
    16861 tgcaaacaaa gcccatcttt accctgatga tagtatgata gaacttaaaa gcacattggc
    16921 tcaaaaatac aaagttcaaa atgaaaatat cattatcggt gcaggcagtg atcaagtgat
    16981 tgaatttgct atacattcta agttaaattc taaaaatgct tttttgcaag ctggagttac
    17041 ctttgctatg tatgaaattt atgccaaaca atgtggtgca aagtgttata aaactcaaag
    17101 tattactcat aatttagatg agtttaaaaa actttatgaa acgcacaaag atgaaattaa
    17161 acttattttt ttatgcttac caaacaatcc tttaggcgag tgtttggatg caagtgaggc
    17221 gaccgagttt attaaaggtg taaatgagga ttgtttagtt gtgattgatg cagcttataa
    17281 tgaatttgca agttttaaag atagcaaaaa acatttagaa ccttgtgaat tgattaaaga
    17341 atttgacaat gtactttatt taggaacttt ttctaaactt tatggattag gaggcttacg
    17401 cattggttat ggcatagcta atgctaatat tattagtgca ttttacaagc ttcgtgctcc
    17461 ttttaatgtg agcaatcttg ctttaaaagc agcagttgca gcaataaatg atgatgaatt
    17521 tactgaaaaa actttagaga ataatttttc tcaaatggag ctttataaag aatttgctaa
    17581 aaaacataat atcaaaatta tcgatagtta tacaaatttc atcacttatt tttttgatga
    17641 aaaaaatagt acagatttgt ctgaaaaatt gcttaaaaag ggtataataa taagaaattt
    17701 aaaaagctat ggtttaaatg ctatacgcat tactatagga acatcttatg aaaatgaaaa
    17761 attttttaca gaatttgata agattttaag atagataaat caaataaaaa tatgtaaaat
    17821 tcgctaaact aagggatgag aattaatgga ttttaaaaat atgcttcatc aaattgggca
    17881 actttatcaa aatttaactc gcaagcagcg tatagtgatt gctgcatcta ttatagtagt
    17941 ggttgggttt ttggtttttt tagctttatt tcgtggaagt ggtagtaatg caaataatgg
    18001 atatgcagtt ttagttgaaa atgtaagccc aagttcttct gctgcaattg tagctaaact
    18061 tgaacaaaat aatattccct ataaattaga aagtgaaaat aaaattttag ttccacaaga
    18121 tcaggtttat cgtcaaagaa tgtttattgc aagcgaaggt cttataaaag atagtcgcgt
    18181 gggttttgaa gcttttgata ttcaagcttt tggagctaca aatgaagagc aaaaggtaaa
    18241 ataccaaaga gccatagaag gcgaacttgc aagaactatt gagactttag aacctattcg
    18301 tagcgctgtt gtacacatag catttcctaa agatagtgtt tttaccgaaa ggcaaattcc
    18361 gcctacagct tcagttgttg ttaatgttcg cgaaggctta aagcttacta gaaaacaaat
    18421 tgatggtata aaaaatattg tttcagcggc agttccaaaa cttactaaag aaaatgttaa
    18481 gattagtgat caaagtggtg tgcctttaga tgagcaagaa gcatatgaag atgacttggt
    18541 tcgtgcgcaa attaaattta aaagtgatca agaaaaagct ttagaagata agattataga
    18601 aaatttagct ccttttgcag gtggtatgga taaagtaaaa gtgagtgtaa atatagattt
    18661 tgatttttcc aagcaagaat ctcaaagtga aatttatgat ccaaatccta tagtgcgtag
    18721 tgagcaaact ttaaacgagg aaagaacagg tagaaaagat ccagaaattc aaggtgttcc
    18781 aggtgctgtt tctaatatag gtcctgttga aggacttgac aataaaggtc aaattgacac
    18841 ttataaaaaa aatcaagtta ctacaaataa tgaactttct aaaactatta caaataccaa
    18901 aaaacaattt gcaacagttt tacgcacttc agcagctgtc actatagatg gaaaatatca
    18961 agatgtggtt gatgaaaatg gggatgtgaa aagcgaatat gttccattga ctaaagaaga
    19021 gcttgcaagt gttgagagta tagttaaaaa tactattaat tttagcgcta ctagaggcga
    19081 tagtgttgta gtgcaaaatt taccatttca tcgtgagtcg attagagttg agagtaaagt
    19141 taaaactttt tacaatcgtt ttgttgagcc atttattcca ccagttaagt attttattgc
    19201 agcgatttta ctttttattt tttacaaaaa agtcattgct ccatttactc aaaaaatgct
    19261 tgaagatgtc gcagcgcaag aagaaatgca gcaaggtcca aatgctgttt tagatgatgc
    19321 tgaagatgct ttggagaaat ttaatgcagc aaggaaaaaa gttgaagaac aacttggttt
    19381 tggggataat tttaatgaag attctattca atatgaggtt ttacttgaaa aattgcgtgg
    19441 tttagtaagt gataaaggcg aggaaattgc agcactttta caaaacttaa ttcaaaatga
    19501 tagtgaattt ggcgaaaagg atatgtgatg ataaagctaa gtgaagaaca aaaaatggtc
    19561 tatgatgatt tatcgatgcc tgagaaggta gcgatatttc ttatacaact tggcgaagat
    19621 gcaacaactt ctgtgttttc acatatggaa attgatgtaa ttacagaaat ttcacgttat
    19681 attgctatgg ctaaaaatgt tgatagatcc gtagctactg cagttttaga agaattttac
    19741 actctgcttc aatcaaatca atatattaaa agtggtggtt tggaatatgc taaagaaata
    19801 ctttttcgta cttttgggcc agagattgca aataaaattc ttgaaaaact cactaaaagt
    19861 atggagaata atcaaaattt tgcttatttg gcgcaaatta aaccacagca acttgcagac
    19921 tttattacca aagagcaccc acaaaccatc gctcttattt tggcacacat ggattctatt
    19981 catgcggcag aaactttaga gtattttagt gatgaattaa gggctgaggt ggttataaga
    20041 atggcaaatc ttggcgatat ttctccaagt attattaaaa gagtttctgc agtgctagaa
    20101 agcaagcttg aaagtcttac ctcttataag gttgaagtgg gcggcccaag agcggtagca
    20161 gaagtgctta atcgtttggg tcaaaaagca agcaaatcaa ccattactta tattgaacaa
    20221 agtgatgaac gcttagcaga gactattaaa gagcttatgt ttactttcga tgatatacaa
    20281 aaacttagca ctcaagctat aagagaaatt ttaaaagtag ctgataagcg tgatttaatg
    20341 ataggtttaa aaggtgcaag tgaagagtta aagcaaaaat tcttagccaa tatgtctacg
    20401 cgtgcaagcg aagcttttct tgaagaaatg ggttttttgg gtgctgtgcg tgttaaagat
    20461 gttgaagatg cacaaagaaa ggttgttgaa gtggtgcaaa aacttgcaga acaaggtctt
    20521 gttcaaacag gcgatgcgga tgaaatgata gagtaggtga gagatggtta atcgtagcaa
    20581 tgtaatttct ggtggggctt ctgatcagca tgttgttgaa ggatatcgtt ttaaagttat
    20641 ttcagaattt gataatcata caggtgaaaa aaaacatact caaactccag atgaagaaaa
    20701 tgctaatata tctttaaatg acgaaaaagc agttgaagaa aatcaagcta ttgcccctac
    20761 gcaagctgtt atggaaactc aaattccaac atttcaacca agttttgttg aagatttgct
    20821 taaaaaaaca gatgaaatgt caagcaatat tattaaactt caaatgcaaa tagaaagcca
    20881 agagaatgaa tttaataacc gcttaaattc agaacttgaa aatgctaaag aaaaatttgc
    20941 caaagaaggt tatgagaaag caaaagaaga atttcaaaag gaattgagtg attttaaaga
    21001 taagtattta aaaagtatag ccaaactcga taatgcttgc gaaaatcttg aaaatttcat
    21061 agaaaaaaat gagaaagaat tagcagatac tgctatagat atcgctaaag aagtaatctt
    21121 aaaagagctt gaactaaatt caagtaagat agcttatgct ttggccaaag atttaatcgg
    21181 cgagcttaag ggtgctagtg caattgagct taaggttaat gcagaggatt atgagtattt
    21241 aaaagagcaa tttgatcaga atgctcatat taaaataagt cttgatgatg caattagcaa
    21301 aggaagtgtt gttattataa gtgacgcagg caatatagaa tccaatctta actctcgtct
    21361 aactaaaatt aaaaaaatgg tgaataatga gtaaaaaatt tgcccatact caagaagagt
    21421 tagaaaagct aagtttaaaa gaattagaaa atttagcagc atctatgcgt gaaaaaatca
    21481 tacaagttgt gagtaaaaat ggtgggcatt taagttcaaa tttgggtgct gtagaactta
    21541 gtatagcaat gcatttggtt tttgatgcaa aaaaagatcc ttttattttt gatgtgtcgc
    21601 atcagtctta tacacacaag cttttaagcg gaaaagaaga aatatttgat actttaagac
    21661 aaatcaatgg tttaagtggt tatacaaaac ctagcgaggg agattatttt gtagcagggc
    21721 attctagcac ctctatttct ttggcagtag gtgcttgtaa ggccattgct ttaaaaggtg
    21781 aaaagcgtat tcctgttgct ttgattggag atggtgcttt aagtgcgggt atggcctatg
    21841 aggctttaaa tgaattgggt gattctaaat ttgcttgcgt aatactttta aatgataatg
    21901 aaatgagtat ttcaaaacca attggagcaa tttcaaagta tctttctcag gctatggcaa
    21961 cgcagtttta tcaaagtttt aaaaagcgta ttgctaaaat gttggatata ttgcctgata
    22021 gtgctactta tatggccaag cgttttgaag agagttttaa acttattact cctgggcttt
    22081 tgtttgaaga attagggctt gaatatatag ggcctattga tggacataat ttaggtgaaa
    22141 ttatttctgc attaaaacaa gcaaaagcta tgcaaaagcc ttgtgtgata catgctcaaa
    22201 ccataaaagg taaaggctat gctttagctg aaggaaaaca tgctaaatgg cacggggtgg
    22261 gagcttttga tatagatagt ggagagagtg ttaaaaaaag tgatgctaaa aaatctgcta
    22321 ctgaaatttt ttctaagaat ttgcttgatt tagcctcaaa atatgaaaat attgttgggg
    22381 ttacagcggc tatgccaagt ggaacaggtc ttgataagct tatagaaaaa tatccaaatc
    22441 gtttttggga tgtggctatt gcagaacagc atgcagtaac ttctatggcc gctatggcaa
    22501 aagaaggatt taaacctttt attgcaatat atagcacctt tttgcagcgt gcttatgatc
    22561 aagtgatcca tgattgtgcg attatgaatt taaatgtggt ttttgctatg gatagagcag
    22621 ggatagtagg cgaagatggg gagacgcatc aaggtgtttt tgatcttagt tttttagctc
    22681 ctttgccaaa tttcactctt ttagccccaa gagatgaaca aatgatgcaa aatataatgg
    22741 agtatgctta tttacatcaa ggacctattg cttttcgtta tcctagaggg agttttattt
    22801 tggataaaga atttaatcct tgtgagataa aacttggtaa ggcacaatgg cttgtaaaaa
    22861 ataatagtga aattgctttt ttaggttatg gacaaggtgt ggcaaaagcg tggcaagtct
    22921 taagagcctt gcaagaaatg aataataatg ctaatttgat tgatttaatt tttgctaaac
    22981 ctttagatga agagcttttg tgtgagcttg ctaaaaaaag taaaatttgg tttattttta
    23041 gtgaaaatgt taaaattggc ggtatagaaa gtttaattaa taatttttta caaaaatatg
    23101 atttgcatgt aaaagttgtt agctttgaat atgaagacaa atttattgaa catggaaaaa
    23161 caagtgaggt ggaaaa
//
LOCUS       DARBAC010000014        21795 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.014, whole genome shotgun sequence.
ACCESSION   DARBAC010000014 DARBAC010000000
VERSION     DARBAC010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21795)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21795)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21795
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.014"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1154
                     /gene="kpsS"
                     /locus_tag="SB799_000390"
     CDS             <1..1154
                     /gene="kpsS"
                     /locus_tag="SB799_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HEG0867656.1"
                     /translation="SGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYP
                     SGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKELGVEIWIFEEG
                     YLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLF
                     AFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAIL
                     QVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDL
                     SQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEG
                     LSYPKKLQFFWREAHAYKPNPILACNFKKYLLQTNQFNGNFYKNFFLDK"
     gene            1226..2347
                     /locus_tag="SB799_000391"
     CDS             1226..2347
                     /locus_tag="SB799_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HEG0867657.1"
                     /translation="MNREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIEADLSKIE
                     KNEQFPFFKISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKIGTMQERIKLFANVIVEKLKQNESKQDYE
                     LILVAHSVGTIVCIEVLEYILRQHLDLSLLCKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSKFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            2344..3705
                     /locus_tag="SB799_000392"
     CDS             2344..3705
                     /locus_tag="SB799_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEG0867658.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMS
                     SKLDEGKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRTKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     RKL"
     gene            3702..4121
                     /locus_tag="SB799_000393"
     CDS             3702..4121
                     /locus_tag="SB799_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867659.1"
                     /translation="MKRVRVKIRANFRRRAKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
     gene            complement(4122..4469)
                     /locus_tag="SB799_000394"
     CDS             complement(4122..4469)
                     /locus_tag="SB799_000394"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEG0867660.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAIV"
     gene            complement(4469..5005)
                     /gene="fliL"
                     /locus_tag="SB799_000395"
     CDS             complement(4469..5005)
                     /gene="fliL"
                     /locus_tag="SB799_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HEG0867661.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            5128..6498
                     /gene="pgmL"
                     /locus_tag="SB799_000396"
     CDS             5128..6498
                     /gene="pgmL"
                     /locus_tag="SB799_000396"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HEG0867662.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVS
                     VGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSH
                     NPKDYNGFKITINKESFFGEELKEFSKEVYKHLDDEIEENLEVEKYDILSLYVKFMCE
                     QFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAEPDGQFPNHAPDPTEEE
                     NLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIHVNEEEKFKLVEEFQKEIEKGAL
                     KGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEI
                     KARLKN"
     gene            6546..6923
                     /locus_tag="SB799_000397"
     CDS             6546..6923
                     /locus_tag="SB799_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 family protein"
                     /protein_id="HEG0867663.1"
                     /translation="MKKILVLLLLCAFAFGASECDRKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCAKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKA
                     KKEALKEQKEKIKKEIKEYIDNL"
     gene            complement(6954..7853)
                     /gene="nadD"
                     /locus_tag="SB799_000398"
                     /pseudo
     CDS             complement(6954..7853)
                     /gene="nadD"
                     /locus_tag="SB799_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651038.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
     gene            7913..8911
                     /gene="gap"
                     /locus_tag="SB799_000399"
     CDS             7913..8911
                     /gene="gap"
                     /locus_tag="SB799_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEG0867664.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLT
                     MAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDE
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            8914..10116
                     /locus_tag="SB799_000400"
     CDS             8914..10116
                     /locus_tag="SB799_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEG0867665.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKT
                     KAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            10113..10784
                     /locus_tag="SB799_000401"
     CDS             10113..10784
                     /locus_tag="SB799_000401"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEG0867666.1"
                     /translation="MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVVFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKF
                     DFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEVIDLNYEKLIIAYEPIYSIGTGV
                     SAQATDIAKVLEFLASLTKAPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            10788..11612
                     /gene="fabI"
                     /locus_tag="SB799_000402"
     CDS             10788..11612
                     /gene="fabI"
                     /locus_tag="SB799_000402"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEG0867667.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEVHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            11616..13109
                     /locus_tag="SB799_000403"
     CDS             11616..13109
                     /locus_tag="SB799_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEG0867668.1"
                     /translation="MTKLSNEELKNILEGRIKKLENSILKEDKIVNEESVKILAKHLS
                     LGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAERFDDEAAKNGACLFKVGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQ
                     NFDENPMPSKDFWKYLEISFILVKGAFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGVAYSILKAFEDNIAKISSLKAS"
     gene            complement(13106..14947)
                     /gene="feoB"
                     /locus_tag="SB799_000404"
     CDS             complement(13106..14947)
                     /gene="feoB"
                     /locus_tag="SB799_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEG0867669.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSVLSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGI
                     YILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKL
                     SVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIY
                     NPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLYIAKILLN"
     gene            complement(14944..15168)
                     /locus_tag="SB799_000405"
     CDS             complement(14944..15168)
                     /locus_tag="SB799_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEG0867670.1"
                     /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSS
                     LKNATIMVELDTSCVILRSDEAKTIEVNLI"
     gene            complement(15250..16590)
                     /locus_tag="SB799_000406"
     CDS             complement(15250..16590)
                     /locus_tag="SB799_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEG0867671.1"
                     /translation="MFYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKE
                     ECVLNAFKAFENLSTDKNTPIWVNDQKLVPIYAAMLDGIASHALDFDDTHTEAILHAS
                     AILTPLCLSYGFHVNKDAKKIIKAFIVGWEIAARVGIASKGTFHKRGFHTTAIAGIFG
                     SVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHF
                     AKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELGKALGEIWQTMQVSIKPYPSCHFAH
                     GLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLM
                     ALGFFDGKITLDSYENLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGRIIQ
                     KDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF"
     gene            complement(16599..17966)
                     /locus_tag="SB799_000407"
     CDS             complement(16599..17966)
                     /locus_tag="SB799_000407"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEG0867672.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFGVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLDVPNISWQPARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTISNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEKQKTFKEVLLADKRVSKVLKEKEIDALLDATTYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            complement(17976..19139)
                     /locus_tag="SB799_000408"
     CDS             complement(17976..19139)
                     /locus_tag="SB799_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEG0867673.1"
                     /translation="MNSKTKLIHCGRGDQGAEVRSVNPTLMRASTILFKDHATWQKYR
                     ELRKTDRVLSYGARGTTTNFELEKLICTLEGGYRAQLFPTGLAALAMVLLNYASKDAH
                     FLITDAIYGPVRTICELFLDKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYE
                     VIDLPKLCKIAHAHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGI
                     VVINEKEWKNFDKLPEALGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQSR
                     KEIKTIFYPKLKSHPNHEIFMRDHKGANGMITIEFTEGYSKDDAIKFVDKLEYFSIGA
                     SWGGYESLATVTTPPRTATDWSARGPFVRFHIGLEDTKDLIADLTQAFDSIKK"
     gene            complement(19152..20591)
                     /gene="dcuC"
                     /locus_tag="SB799_000409"
     CDS             complement(19152..20591)
                     /gene="dcuC"
                     /locus_tag="SB799_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HEG0867674.1"
                     /translation="MLGIVFSLFSVFLLVFMLYKKINAHMALLLSGLLLLSLAALFGL
                     SPHIVTKGSLNLGFFDIFQVFNQTMSSTLAGLGLTLMTIAGFSAYMDHVGASYALFKV
                     FEKPLKAVKSPYVLLIVAYFIVQFLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSAL
                     SVIAICQYIDHGPGSGNVIMASKVAEVDPAIYFVHYQLPTTLPIIIAVGIAIYLCNKF
                     FDKKDNFVFNAQEIEKELNENEGKEKELKKPPRIYAILPIIPLVLILGFSSVLDSILV
                     LMGISSAEEVKAVASTAIKMNVPVAMVISTFVAIIFEMIRYKSIVETLNSIMIFFKGM
                     GHLFVITVSLIVCGQVFASGLLSVGFVDTLIEFCKNAGFGVLAIIIAVSILLAVCAFL
                     MGSGNAAFFSFAPLIPNIAKHFGVETITMIAPIQIMTGFGRCVSPIAPAILAISAIAK
                     VSPFAVVKRTAIPMLVAAIVNVIMTYIYL"
     gene            complement(20595..20957)
                     /locus_tag="SB799_000410"
     CDS             complement(20595..20957)
                     /locus_tag="SB799_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEG0867675.1"
                     /translation="MSNYPKAIGPYSAYREANGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
     gene            21125..21781
                     /locus_tag="SB799_000411"
     CDS             21125..21781
                     /locus_tag="SB799_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEG0867676.1"
                     /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANN
                     HISGRSLDSPLTAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVG
                     ILCINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSV
                     DSSYLNSNYQLSITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKK
                     "
BASE COUNT         7435 a         3136 c         3766 g         7458 t
ORIGIN      
        1 ttagcggtaa aaatgtttta ctcttgcaag gacctgtggg aaattttttt caccttcttg
       61 caataaaaat gaaaaaaaaa caaaccaaag tttttaaact caattttaac ggtggagatt
      121 tttttttcta tcctagtgga acgaggtgta agtgcgatga aaaagatctt gaaaatttct
      181 atagagattt ttttcaaagc aaaaaaatcg atgctatttt aatgtataat gattgtcgta
      241 ttatccatgc taaggctatt aaagtggcta aagaattagg agttgaaata tggatttttg
      301 aagaaggata tttaaggcct tattgtatta ctttggaaaa agatggggtg aatgcaaatt
      361 cttctttacc gcgtgataaa aatttttatc tttctcaaaa tatttttacc aaagaaagca
      421 taaaagaaat tccaggtgga tttaaattta tggcttttga tgcctttttg tattggttgt
      481 ttgcttttat tttggcccca ttttttaaca acaaacttca tcatcgcact ttatatcctt
      541 ttgaattttt attttggttt agatctttat acagaaaata tctttacaag attacagaaa
      601 aaaaactaaa tgaaaagatt tataatttag aaaaaaagta ctttttggcg attttacaag
      661 tttatagcga tacgcaaatt aaatatcatt acaaaaaaag catagagcac tttatagagg
      721 aaaccatact ttcttttgca aaccatgcaa gagctaaatc ttatctagtt tttaaacacc
      781 atcccatgga taggggttat aagaattatt ctaaactcat aaatgattta agtcaaaaat
      841 atcatgtaga aggaagggtt ttatatgttc atgataccca cttgccagtt cttttaagaa
      901 aggctttagg ttgtattact ataaattcaa cagtaggcct tagtgctatt ttagaaggct
      961 gtccgactaa ggtttgtggc aatgcttttt atgattttga aggcttatct tatccaaaga
     1021 agcttcaatt tttttggcgt gaagctcatg cttataaacc caatcctatt ttggcatgta
     1081 attttaagaa atacctttta caaactaatc aattcaacgg caatttttac aaaaatttct
     1141 ttttagacaa ataagactaa aaagctttga ttaagagagc ttttaaagca aagttgttat
     1201 aattaaaagt aaaaagaaat attgtatgaa tagggaagta ttttatatag caggatatga
     1261 tcctaaaagt tatagatttt attatgattt atttaaaaaa aacctaaaag attattctca
     1321 tgcttttaac attgaagctg atttaagtaa aattgaaaaa aatgagcaat ttcctttttt
     1381 taaaatttct tgcgagggag tgcaaactaa atatcatttt ttaacatgga atgatattgt
     1441 taagaaaaat tggtcagaaa attataaaga tgccttagca gattgttata gtttttttag
     1501 aatttatact atcacagggc tttttatcaa atttggcaaa gagtcgattt atcaacttat
     1561 cacaggttat tatccttttt tttatgtgtt attttcttta ctattttctt tggttttagc
     1621 ttttggaagt tttgcttttt tgcaaaatta tatgcatttt tctttagcta tcatcatagg
     1681 atgtttttta ggatttttac taaatcattt tttatttaaa ttgggtaaga aattagctgt
     1741 attttggata gcaagaattt gtgctttttg tgctacttgg caagataaaa aaataggtac
     1801 tatgcaagaa agaatcaaac tttttgcaaa tgttatagtg gagaagctaa aacaaaacga
     1861 aagcaaacaa gattatgagc ttattttagt agcgcatagt gttggaacta tagtttgtat
     1921 agaagttttg gagtatattt taagacaaca tttagattta tctttgcttt gtaaattaaa
     1981 aattcttact ttaggagaat gcataccttt agtgagttat caaaaaaaag cagatgaatt
     2041 tagaaagaag cttgaatttg tttcaaagtt tgatttaaaa tggtatgatt acacatcgat
     2101 tattgatgga gcatgttttc ctcaagtgga ttttttccgc acgagtggtg taaatgctaa
     2161 atttacaccc ccatttttaa gtgctaaatt tcacacttta tatgaaaaac atgagtataa
     2221 aaaaataaaa agagataaaa acaaagcgca ctttttatat ctttatagta ttagtgttaa
     2281 aggtgattat gatttttttt ctttcatcat aatgcctaaa tttttagaag aaaaggtaaa
     2341 aatatgagtg aatgtccctt ttttccaaaa ccttataaaa acaaggcttc tacactttta
     2401 acttttttgc taaagcgtag atcttggctt gatggccttt atgagcgtag ttataaaatg
     2461 caaacaggct atgtgaagat gccaaatttt gatctttatg ttataaatga cactaaagaa
     2521 gttaaaagaa tgatggttga tgaggttaga gaatttccta aaagtgcatt tttgcatgag
     2581 cttttaagtc cgcttttagg agagagcatt tttactacaa atggtgaagt ttggaaaaaa
     2641 caaagagaac ttttgcgtcc aagttttgaa atgactcgta tcaataaagt gtttaatctt
     2701 atgagtgaag ctgtggcaga tatgatggat cgttttagca agtatccaaa tcatgctgtt
     2761 atcgaagtag atgaagctat gacttttatt accgctgatg tgatttttcg caccattatg
     2821 tcttcaaaac tcgatgaggg aaaaggtaaa aaaatcttaa acgcctttgt gacttttcaa
     2881 gagcaaagcg tgcatacagc catgcgtcgt atgtttcgtt ttccaaaatg gctttcttat
     2941 gtattaggag atcgtaagcg tactaaggcc ggagatgtga ttaggcaggt tttaagtgac
     3001 atcataaaac caagatatga tatggcagat aatgcagaat ttgaagatat tttaggatct
     3061 ttgcttttag tagtggatgc ggatacgaat aagcgttttt cttttgagga aattttagat
     3121 caagtggcta tgcttttttt agcaggacat gaaaccacag caagttcttt gacttggacg
     3181 ctttatttgc ttagtcttta tcctaaggag caagaaaaag cttatgagga gattactcag
     3241 gttttacagg gtggagctat tgaaatttcg catctaagac agtttaaata cttaacaaat
     3301 atttttaaag aatctttaag gctttatcct cctgttggat tttttgcaag agaggcaaaa
     3361 aaagataccc aagttagaga taagcttata aaaaaaggtt ctggggtggt gattgctcct
     3421 tggttgatac acagacatga agaattttgg acaaatccgc atggatttaa tccttctcgt
     3481 tttgaaggag aatacaaaaa agatgcttat ttgccttttg gggtagggga gagaatttgt
     3541 ataggacaag gttttgctat gcaagaagcg attttgattt tggctaatat tttaaaaact
     3601 tacaaactag aacttgaaga aggttttgta cctgatgtag tagggcgttt aacagtgcgt
     3661 tcggctaatg gtatgaggat aaaatttagc aaaagaaagc tatgaaaaga gttagagtta
     3721 aaattcgcgc caattttcgt cgtcgtgcaa aacgcacctt aaaaggaagc ttaaaagaaa
     3781 aattagcagg gactatcctg ctttgtgcga tagtaccttt agcagtttta ggatatcttt
     3841 ttatcgtgat tataggaact ttttttaata ccgcgcgagc aagacagggt gttagagctt
     3901 tagatcattt tgtaaatgca agcttgttta atggctatgc ttgggagagc gtttcttctc
     3961 atgcgtggcg tgaaagaaat cgcaaaaaat gggcaaggat tgttataaaa atcacagatt
     4021 tttttcaaaa agatcattgt aaaagagcaa ataaaagaga acaacctgtg gtggatttca
     4081 tactttcaag aaatttagac aagcaaacta taggaaaata atcaaactat agccactatg
     4141 gctatagcaa aaccattatc atgagaaatg cttagggaag tttgagtgat attaaaatct
     4201 tttgtaattt tttgagaata ttttaattta ggcgcgtttt tttcatcttt tgatatttca
     4261 atatcaaaaa aactgcataa ttcacaaatt ccaacaccca aagccttgct agcggcttct
     4321 ttagcagccc aaagacctgc tagagttgct ggatttttaa tgagtatttg ttcttttggg
     4381 cttagaaatt tatccaaaaa atttttgcca tgtctagaat gaattttttc tatcctagaa
     4441 atggcgatga tatcacagcc tacacgcatt aagaaactac aaaatccgta aaataaacat
     4501 ttttaataaa gccatcggtt aaaatttcat tgatttttcc aactagctca tcttttaaac
     4561 gttctttgcc tttttgtgta cttacttctt caaaagtttt agctgttaat gtacgaataa
     4621 taatatcacg aatcactggg acttttttat caagttcagg ttttaaaagt tcgctatttt
     4681 gttctaattc tatagtgcat tttacatatc ttgagccact atcgctaagt aaatttaggg
     4741 taaaaggatc aagtggatac ataggaccta tattagcaaa atcactacct cgttgagtag
     4801 gggctgaaac cttaggttta tcggcttttg cctcttcttt tggagcttct ttgacttcac
     4861 tttcatcact tgaactgctt gaaataagcc aagcaatcac tcccataata ctaagaagta
     4921 aaacaaaaag taaaataaca ataataatta caagtgaacc gccttttttc tttttcgttt
     4981 cttcgttttc taattcttca tccataaatt ttccttcatt tagtgaaatt aatgtaaaat
     5041 tgtagcaaaa atttcttttc tatccaaatt tgctttagaa aaacgataaa tttaggtcaa
     5101 agaagagatg aatttgaagg aaaaaaaatg ttagatgtga tttttagaga atatgatata
     5161 agaggacttt atggcaaaga actgaatgaa aaaagtgtta aggctatagg tttttgcttg
     5221 ggacaaacca tgctaaataa aggctgtaaa aatgtaagtg tgggctatga tgcaagatat
     5281 agtgcaaatg aactttttaa ttatctagtg agtggactta acaaagcggg aataaaaatc
     5341 tatgatatag ggcttgtacc aactccattg ggatatttta gtctttatga gggcttgaaa
     5401 tttgatgcaa atgttatgat aacaggctct cataacccaa aagattataa tggttttaaa
     5461 atcactatca ataaagaaag tttttttggc gaggaattaa aagagttttc aaaagaagtt
     5521 tataagcatt tggatgatga gattgaagaa aatttagaag tagaaaaata cgatatttta
     5581 agcctttatg tgaagtttat gtgcgagcaa tttagctttt taaaggattt taattataaa
     5641 tttggtgttg attgcacaaa tggtgcggct ggagtggtga taaagccttt aatcaaggct
     5701 ttaaatttaa aagctcatgt aatgtttgca gagcctgatg gacagtttcc aaaccacgct
     5761 ccagatccta cagaagaaga aaacttaagt gcgattagag agtttttaaa tcaaaatcaa
     5821 gattattctt tagcttttgc ttttgatggg gatgctgata gaatggttgc tttgagtaaa
     5881 actcatgtat tttgtggaga tgagctttgt tatttgtttg ctaaaaatat tcctaatcca
     5941 cgcattttag gtgaggtaaa atgttctaaa aatctttttg atgaagtggc taaatttgga
     6001 actattttta tgggaaaaac aggacattct aatatcaaaa aaatgatgaa agaaaaagat
     6061 attgatttag ctgctgaagt gagtgggcat attttcttta aacatagata ttttggttat
     6121 gatgatggaa tttacgcatt tttaagagcc ttagaacttg tttataaagg ttttgattta
     6181 gaaagtatga ttaaagcttt accaaaactc tatactacac ctgaaattaa aattcatgta
     6241 aatgaagaag aaaaatttaa acttgtggaa gaatttcaaa aagagattga aaaaggagct
     6301 ttaaaaggtg ttaaaagtct ttgtgaaatt gatggagcta ggatagattt tggcgatgga
     6361 tgggctttgc ttcgcgcatc taacaccagc ccttatctta tcacacgctt tgaagcaact
     6421 tctttagaaa gagcaaaaga gcttgaaagt acggtattta gtttatttaa tgagataaaa
     6481 gctaggctta agaattgatg agataatatt tcgcgattta aatttatttt aaaaaggaat
     6541 taaaaatgaa aaaaatactt gttctacttt tgttatgtgc gtttgctttt ggcgcaagtg
     6601 aatgtgatag aaaaatcgat cgtatcaata aagaaatcag tttttctaaa gcgcataatg
     6661 atacagctag aaccttaagc ttagagcttg ctttaaaaca agtacaaaat gattgtgcta
     6721 aagatcctat gttttatgat aaaaagttag aagctaaaaa acttaaagaa caagaagtag
     6781 aaaaaatcga aaaagaactt gatgctttaa aagaacaaaa agattatatg agtaaggctg
     6841 agtataaagc taaaaaagaa gctttaaaag aacaaaaaga gaaaatcaaa aaagaaatta
     6901 aagaatatat tgataatctc taaaaattaa aaggctaatt aaatttagcc tttttaaacc
     6961 ctaccttttt taagattttc tagtaattct tctatattat aaattcctct gtgttctggt
     7021 gttaaaagat ggattaaaat atcaccaaga tcaatcacac tccattcttc gctactatct
     7081 atgtttaaaa attcctcacc tttggcttta agttgtgttt taagctcatc gatcaaggat
     7141 agagcgtgtc tttctcctaa agtagctgcg ataatgacat attttacaaa gtattcttgc
     7201 tcgctcatgt caatggtttt gatatcttca gctttttttt catctaaaat tttaacgatt
     7261 aaatctattc tttcttgcat tcttttcctt taatttttga aattgtatca atttttttgt
     7321 aatttttcat aatatttttt tacttcatct ttaatttctt cacaaacttc atttatattt
     7381 aaagtgttgc gtatgaaaga agatgcgatt tttttatcag tttttaaatc tttaaaattt
     7441 ttaggaattt ctatatcatt gcgattagca ataacaaatt ctactaaaga atttaatttt
     7501 tcaaaatcat gccaaagatg aagtttctct aaatgatctg cgccaattaa aagataaaat
     7561 ttgctaggat tataaagctt ataaagatat ttaacacttt ctatactagg aacagggcgt
     7621 ttttgcttgg tttcaaaatc acaaatttca acttttggaa aatgtcccca aagtttttta
     7681 acccataaga atctttgctt ttcatcagca ctaaagtttt gtttaaaagg gttgatataa
     7741 gtaggcataa taataagctt atcaatatct aatttttcca aagcctctaa aacaacgcta
     7801 ttgtgtccat tatgtggtgg atcaaaactg ccaccaaaaa gtgctatctt cattaaaatt
     7861 ttaacctttt ttttgtagaa tattagcatt atattttgca aaaggaaatt aaatggctgt
     7921 aaaagttgct ataaatggtt ttggacgcat aggcagatgt gttgcaagaa tcatcttaga
     7981 aagaaatgat attgagcttg tggcgataaa tgatactacg gatattgaac ttacaaaata
     8041 cctttttaaa tacgatacag tacatggtga atttaaaggc agtgttgata gtgaaggcga
     8101 tgatttagtg gtaaatggta aaaaaatcaa agtatttaaa agtcgcaatg taaaagatct
     8161 tgactttgca aaacacggcg cacaaattgt tttagagtgc acaggagcgc atttaactat
     8221 ggcaaaatgt caagaattta tagatatggg agtacaaaaa gtgatcatga gtgctcctgc
     8281 aaaagatgat actcctactt atgttttagg agtaaattca gaactttaca agggtgaaag
     8341 cattatttct aatgcaagtt gtacaacaaa ttgtttaggt cctgtttgtc gtgttttaca
     8401 agataatttt ggcatagaaa aaggacttat gacaacaata catgcttata caaatggaca
     8461 aagtattatt gatgctaaag ctaaagataa acgccgttct cgtgctgcag cgcaaaatat
     8521 cattccaact tctacaggcg cagcaaaagc tatgaaactt gttatgcctg aacttaatgg
     8581 caagcttcat ggacaaagta tgcgtgtgcc agtgattgat gtatcaagcg tggatttaac
     8641 tgcacaacta agccgtaaag tcagcaaaga tgaaatcaat gaagctttta gaaaagctgc
     8701 aactacaaat ttaaaaggca ttttaatggt agatgatgaa gaaagagttt caagcgattt
     8761 tatcacttgt tcttatggag ctattgtagc aagtgattta actcaagtga ttgcggatga
     8821 ttttatcaag gtaattgctt ggtatgataa tgaatggggc tattcaagtc gtctagtaga
     8881 tatggcagta tatattgcaa ataaggctta atcatgagtg atattatttc tataaaagac
     8941 attgatttag ctaagaaaaa agtttttata agatgtgatt ttaatgttcc tcaagatgat
     9001 tttttaaata tcactgatga tagacgcata agatcagcta ttcctacgat aagatattgt
     9061 ttggataatg gctgtagtgt gattttagcc tctcatttag ggcgtccaaa agaaattagc
     9121 tctaaatatt ctttagaacc tgtggctaag cgtcttgcta gacttttaga taaagaaatt
     9181 attatggcaa aagatgttat cggcgaagat gcaaaaacca aagctatgaa tttaaaagcg
     9241 ggtgaaattt tacttcttga aaatttgcgt tttgaaaaag gcgaaactaa aaatgatgaa
     9301 aatttagcca aagaacttgc ttctatggtt caagtttata tcaatgatgc ttttggagta
     9361 tgccatagag cacattctag tgtagaggcg attactaaat tttttgatga aaaacacaaa
     9421 ggcgcaggat ttttactcca aaaagaaatt gattttgcaa gcaatcttat caaacatcca
     9481 gcacgtcctt ttgtcgctgt tgttggaggt tcaaaggtaa gtggaaaact tcaagcattg
     9541 acaaatttat taccaaaggt agataaatta atcataggcg gaggtatggc atttactttt
     9601 ttaaaagctt taggttatga tataggaaat tcacttttag aagaagaact tttagaagaa
     9661 gctaataaaa ttcttaccaa gggtaaaaat ttaggagtga aaatttatct tccagtagac
     9721 gttgtagccg ctcctgcgtg ctcacaagat gcgccgatga aatttgttcc agcgcaagaa
     9781 attccaaatg gttggatggg tttagatata ggacctgcga gtgtgagact ttttaaggag
     9841 gtgatttctg atgcgcaaac gatttggtgg aatggaccta tgggtgtttt tgaaattgat
     9901 aaattttcaa aaggtagcat taaaatgagt cattatatca gcgaaggaca tgcaacttct
     9961 gttgttggag gcggtgatac ggctgatgtg gttgcgcgtg caggtgatgc agatgaaatg
    10021 acttttattt ccactggagg tggtgcttct cttgaactta tagagggtaa agaacttcca
    10081 ggtgtaaaag ctttaagatc taaggaaaat gaatgatctt tgctgcaaat ttaaaatgca
    10141 atcacacaag ggcaagcttt aaaatttatg ctgaaatttt aaataaaact atgggggcaa
    10201 aatgcgatga tattatcgtt ttcccaccta gcgtagtatt tttagaaaat gaaaataact
    10261 tcatacaagg agcgcaaaat ttttatcctt gtgttaatgg agcttttaca ggcgagcttg
    10321 gaaaagaaca tttggacgaa tttgggatca aatgtgtttt aatcgggcat tctgaaagaa
    10381 gagctttagg agatgaagaa tttattaagg ctaaatttga ttttgctaaa gagcatggtt
    10441 ataaaattgt tttttgtata ggtgaaaatt tagatacaaa aaattcaggc aagactttag
    10501 agtttttaaa aaaacaactt gaagttattg atttaaatta tgaaaaactc atcatcgctt
    10561 atgagcctat ttattctata ggaacgggag tgagtgcaca agctacagat attgctaaag
    10621 tgcttgaatt tttagcgagt ttaaccaaag cacctttgct ttatggtgga agtgtgaatg
    10681 aaaataatat taaagaaatt ttaagtgtaa atcattgtgg tggagttttg ataggctctg
    10741 cagctttaaa agtagaaaat tttataaaat taatcaaagg ataaaagatg attatgaagg
    10801 gtaaaaaagg tcttattgta ggggttgcaa ataataaatc tatcgcttat ggcatagcaa
    10861 aagcatgttt tgatcaagga gccgagcttg cttttacttt tttaaatgat gctttaaaaa
    10921 aacgcgtaga acctatagca caagagttta attctaattt tgtttacgag cttgatgtaa
    10981 acaataatga gcatttagat tctatcgctg aaaaaatcaa aaaagattta ggtgagattg
    11041 attttgtggt acatgcggtt gcttttgctc caaaagaggc tttagaaaat tcttttttag
    11101 aaacttcaaa agaagctttt gatatagcta tgcaaacttc tgtgtattct ttactttctt
    11161 taacacgtgc ggttttacct attttaaaag ataagggttc gattttgact ttaagttatc
    11221 ttggtggggt taaatatgtg cctcattata atgttatggg tgtagcaaaa gctgcacttg
    11281 aaagttctgt gcgttattta gcaagagatt taggggtaaa aggaattcgt gttaatgcta
    11341 tttcagcagg tcctattaaa actttagcag caagtggaat aggagatttt agaatgattt
    11401 taaaatacaa tgaaatcaat tctcctttaa aacgcaatgt gagtatagaa gatgtaggaa
    11461 attcggctat gtatttactt agcgatttgg caaatggtgt tacaggtgaa gtacattatg
    11521 tcgatgcagg atataacatc atgggtatgg gtgatgttga aaaaaatgaa gaagggcaaa
    11581 ctgttctttg ttgggataat caaaaaggat aaaaaatgac aaagcttagc aatgaagaat
    11641 taaaaaatat acttgaaggt cgcattaaaa aacttgaaaa ttccatttta aaagaggata
    11701 agattgtcaa tgaagaaagt gtaaaaattc ttgctaagca tttatcttta ggcaatgaaa
    11761 ttccagctct tgctcaaaga ttttttcaaa tcgcacctaa aacaaagtta gtatggcttc
    11821 atctttgtga atgtacaggg tgtagtgaga gtttgttgcg ttctgagttg ccaagttttg
    11881 atgagcttat ttttgatttt ttttctttag aatatcatga aactttaatg gcagcaaatg
    11941 gcactaaagc tgaagagctt ttagagcatg ttttagaaga agattttatt ttagcggttg
    12001 aaggtggtgt tgcagccatt gatacctttt ttcttactat aggagcacaa ggagagagtg
    12061 gctatgaaat tttagaaaaa ctagccgcta aagccaaggc tatctttgca gtgggtactt
    12121 gttcaagtta tggtggtatt caggctgctt atccaaatcc tagtaaaact tgtggtatta
    12181 gtgaagtttt aagtcagaaa gtagtaaata tcccaggttg tcctccaagt gatataaata
    12241 tcattgcgac tttaagtttt tttgctttat ttggagtttt acctgaactt gatgagcaaa
    12301 atcgtcctgt ttgggcttat ggtaaatgcc tgcatgatat gtgtgaaaga aaggcaaaat
    12361 ttgaaagtgg gatttttgct gaacgttttg acgatgaggc tgcaaagaat ggagcttgtt
    12421 tatttaaggt aggttgtaaa ggaccttata cttacaataa ctgtcctaaa gtgaaattta
    12481 atgctaaaac ttcttggcca gtggccgcag gacatggttg tatagcctgt agtgagaaaa
    12541 atttttggga tgagtttggg aattatgaaa agcctatggc aaatattttt tcttacgcta
    12601 aactttgtaa tgaagagtta aaacaagaat tttttctaga agagcaaatt aaaattttag
    12661 aacaaataga ttttgaattt gaaagcaata taaaacttat tttacaaaat atagctaaaa
    12721 ataaattagg cgctttgctt gtagaaaatt ataaaaaatc ctttgaaaaa aactatgctt
    12781 ttatagaaca aaattttgat gaaaatccta tgccttcaaa agatttttgg aaatatcttg
    12841 agataagctt tattttggtt aaaggcgcat ttttaaaaga taagaatgat tttttaattg
    12901 cggcaaaaaa ttatgctttt aaacatgcaa gtccttatga ttttaagtta aatatgaacg
    12961 ctgaaaaacc aaagcttgat gtgagcaaat cttttcgtat gactttaatc tatctttgcg
    13021 gcggacttga ttttgaaggt gttgcttata gcattttaaa agcttttgaa gataatatcg
    13081 ctaaaatttc atcattaaaa gcaagttagt ttaataaaat tttagcgata taaagtccta
    13141 taaaagctac tatataagca cttgtgcagg taaaaagaaa gagaaagaga gtgtatttta
    13201 gctttccact ttcttttgaa aaaactatag ttgctgcaaa gcagggatta taaatcatta
    13261 caaataaaat aaaagccact gcacttggta tgggtatatt tttagcgata attcctttta
    13321 aatcattatt tgtttcatct acatcttttc ctagtgaata aagcacgccc atagttgaga
    13381 tcatcacttc tttagcagcc aaaccactga ttaaagatac gcttaatttc caatctaact
    13441 caaggggttt aaaaataggt tctatgcctt tgccaaattg tcctaaataa ctttgttcta
    13501 tagctctttc ttgagcatta aaatcattta aattttcttc actttttgga aaattgctag
    13561 caaaccatat gagcaaagag gccaaaagta tgaaagttcc tgctttttta agatacattt
    13621 tggctttatt ataaaccata aaccaaacta aatgccaatt tggcatacga tattttggca
    13681 tttccataac aaaaggttca tcaagtccac gaaatgctgt cattcttaaa aattttgcag
    13741 cacaaagtcc taaaatcgca cctaaaatat aaattccaaa aagataattt cctgcttttt
    13801 cacttggaaa aaaagcaccg ataaaaagca catatacagg aagtcttgcc ccgcaactca
    13861 taaaattgat cacaaaaaga gttaaaagtc tatctctttt gttcttaaga gtgcgtgtag
    13921 ccataaaagc aggtactgaa caaccaaaac cagtgattag tggaataaaa cttttaccat
    13981 gcaaaccaaa tttatgtaaa atcccatcaa gtaaaaaagc tactcttgac atatagcctg
    14041 tggtttctaa aagagctatg cctaaaaata aaatcattat attaggcaaa aaaagtatca
    14101 cagcaccaac acctgcgata atcccatcag ccaaagctga agcgataaag gtattagaaa
    14161 tattgttttt aacaaattca cctaaggtat taaagcccga ttctatataa tccataggaa
    14221 tttgccctaa gctaaaggtg agttgaaata aaagccacat taaaaataaa aatataggta
    14281 agccaaagaa tttatggata agcaaggcat cgattttttt ggttaaattt ctttcttctt
    14341 ttttgtgtgt aataattttt tttgaaagtt cattaataaa atataataaa tcttcttttt
    14401 ctggactttt ttcgcaaagc ggagtgtaaa attgggatct tggaataaat ttactttcaa
    14461 ataaaataat aattttttgc agcaaaagtt ctaaattttc ttttgttttt gctgaaattt
    14521 caacaacttg actttgaaat tcttggctta aaacagaagt gtcaagctct ataccttctt
    14581 ttttggcttc atcacacata tttaaagcta aaagcatttt tttattaagg cttaaaagtt
    14641 ctgcactaag gataagatta cgttctaaat tggtagcatc taaaacatta acaataacat
    14701 catagtcatt ttgatttaaa aaatgacgtg tgattttttc ttcttcgcta tatccatcta
    14761 aagaataagt tcctggcaaa tcaatgactt caaattcata gtttttataa aaagtttttg
    14821 cgcttgcttt ttctatagta actccgctaa aatttcctac tttcatattg gctttgcaaa
    14881 gcgcattaat aagaagactt ttgcctacat taggctgacc tacaagggct attttgattt
    14941 ttttcatata agattcactt ctatggtttt agcttcatca gatcttagga taacacaact
    15001 tgtatcaagt tctaccatta tggtggcatt ttttaaagag gagtgaattt ttttcaagtt
    15061 tttattttta ataaatccaa agcttaaaag tctatttttg agttctttgt gagcgtttaa
    15121 attgacaata atagcttttt gtccatcttt taactcgttt aaagtcattg taattcctaa
    15181 attaataata aatattataa taaaaaagtg taatgaaatt atccttcttg taaaaagaag
    15241 gataaatatt taaaaagaaa agtggtttaa attttctaga ttgatgattt gatctagaat
    15301 tttgttagct ttagcattat caaggtaaat ttgtgcattg gctaaaaatt tagcttttaa
    15361 ttcttcaaaa cttagtggat tatcaaaatt acctttattg ataaaaacat ctttttggat
    15421 tatgcgtcca tcttgcaaac tggcttctaa atgccctgga aaatattttg gaaagccttg
    15481 agattttctt ttttcgtaac tgattttttt agcaaattct agtacttctt cacgctttaa
    15541 attttcataa gaatcaagag tgattttgcc atcaaagaat cctagagcca ttaaaaaagg
    15601 catggaaaat ttagcttcat aagcactatt tggagtgtat tttgcttcca aaggatcaca
    15661 gataaaagaa ataggaactt catctacaaa acaatgaata cttttaattt catcagcttt
    15721 taaaccatca ttttttaaag caatggcaca atcaataagc ccatgagcaa aatgacagct
    15781 tggataaggt ttgattgaaa cttgcatggt ttgccaaatt tcacctaagg ctttgccaag
    15841 ttctgtttta tcgcattctt cttctatgcc aaaacattta aagatattat ccctaccttc
    15901 aaaaatactc aaaggcccac tcatattgtt tttagcaaaa tgagccacca taatgccgtt
    15961 tttaatagca ttggcaatat gtaaaacttt tgaattagat ccattggata aaaactcatt
    16021 aaccccactt gcaaaacttc ctgcaagtcc taaagcatta atgatttgtt ctttgttaag
    16081 atctagcaag attgcacttg cactcacgct tccaaaaatt cctgcaatag cagtagtatg
    16141 aaaaccacgc ttatgaaaag tacctttgct tgcaatgcct actctagctg caatttccca
    16201 gcctactata aaagctttga tgattttttt tgcatctttg ttaacatgaa aaccataact
    16261 taaacaaagt ggagttaaaa tcgcacttgc atgcaaaatc gcttctgtat gcgtatcgtc
    16321 aaaatctaac gcatgagaag caatgccatc tagcatagct gcgtatatag gaactagttt
    16381 ttgatcattt acccaaatag gagtattttt atctgtgctt aaattttcaa aagctttaaa
    16441 agcatttaaa acacattctt ctttgcttgc tgctatggct gttccaaggc tatcaagcat
    16501 aagctcttta gccctttgaa caactgtatt agggatattt tcatatttaa gattgaaaat
    16561 aaaatccgct aaaatttcac tatagaacat gatttttcct attttaagat agcgctattt
    16621 ttgatttttg ctaaaaattc atctacaagt tttggtgcat atcctacata ggttgttgca
    16681 tcaagtaaag catcaatttc tttttctttc aataccttag atactctttt atctgcaagt
    16741 aaaacttctt taaaagtttt ttgtttttct atacctagca tagcattttc ataaacaatt
    16801 tcatgggcat gttgttttcc ataatgatcg cttaatgcaa acataacacg ctcggctaaa
    16861 acaaaaccat taagagtatt taaattttta agcattttgt ctttttttac ttctaaatca
    16921 ctaagagcga atttcatatt tgctaaaacc acagaaagca ttaaaaacat ttcaggtaaa
    16981 agcttccatt ccattttcca aacttgacca tctctttcat gttcatgtct ttcaatatcg
    17041 cttaaaatgg ctaaatttgc tttaaaggca ttgcttattg taaccgcatt ttcgcttact
    17101 gcaggatttc ttttgtgtgg catagtgctt gatcctactt gtccttttcc aaaaggttca
    17161 gcaacttcat caatttcatt atgcgaaagg attaaaattt catgagcgat tttgttaaag
    17221 gttgcgttga tattacctag tacaaaacca agctctataa agcgatcacg tgcgggttgc
    17281 caagaaatat taggcacatc aagtcctaaa ttttctaaag tgagtttttc tacttcattg
    17341 cactcatcac ttaaacttgc tttagttcct acagcaccta ctatactacc tacataaagt
    17401 cttttttcaa gctcaagtat tctttcaaaa tgacgctcaa gttcgcttaa ccaaatagcc
    17461 actttatgtc caaaagtaat aggcaaagct tgaagtgcta aagttcttcc catcatagca
    17521 gtgtttttat gggttttagc tagtttcgct aaggcttttg cgatagcttt taattcactt
    17581 tttacaagag tcattgcttc tttaaattgt aaaaccagtc ctgtatcgat gatatcttga
    17641 gtggttactc caaaatgtac atattcgcct aaattattat cgcaagcttt ttctaatcct
    17701 cttacagtag gaactaaagg gtgtttggtc tttttaaatt cagcaaagat aaagtccata
    17761 tccataaatt tataatgagc tttttttgcg atctcatcag ctgctttttt agggataatt
    17821 ttaagttttg cttgtgcttt tgctaaagct gcttcaacat cgagccattt ttgtatgcgg
    17881 ttttgttcgc aaaaaatagc acgcatttcc tgcgtgctcc atgagtctgc tagtaatcta
    17941 tgatcaaata cgctaattcc tgtcatctta tctccttatt ttttaatact atcaaaagct
    18001 tgtgttaaat cagcaattaa atctttagta tcttcaagac ctatatgaaa tcttacaaat
    18061 ggtcctcttg cactccaatc tgttgcagtt ctaggtggag tagttacggt ggctaagctt
    18121 tcatatccac cccagctagc accaattgaa aagtattcta gtttatctac aaatttaata
    18181 gcatcatctt tgctataacc ttctgtaaat tctatggtaa tcataccatt tgcaccttta
    18241 tgatcacgca tgaaaatttc atgatttggg tgggatttga gttttggata gaaaattgtt
    18301 ttaatttctt ttctactttg taaaaactct acaatttcat cagcactttt ttcatgagct
    18361 ttcattctca catctagtgt tctcatacca cgaagtacta agtaagcatc atcaggactt
    18421 gttgtaaagc ctaaagcttc tggaagtttg tcaaaatttt tccattcttt ttcgttgatt
    18481 actactatac ccatggttac atcagagtgt ccactaagat attttgtagc agcgataact
    18541 gaaatatcca ctccaagttc taaaggattt agaaaatatc cactagaata agtattgtca
    18601 atagctacag ggatattatg cgcatgggca attttgcaaa gttttggtaa atctatgact
    18661 tcataaagta tagaacctgg actttcacat aagataagct tggtattagg tttgattttt
    18721 tcttctacat cacttgcatc agcttttaaa aaatcaattt caactcccat tttgtctaaa
    18781 aataattcgc aaatcgttct tacaggccca taaattgcat cagtgattaa aaaatgtgca
    18841 tctttgcttg catagtttaa aagcaccata gctaatgctg caagtcctgt tgggaaaagt
    18901 tgtgctctat aaccaccctc tagagtgcaa ataagttttt caagttcaaa attggttgtt
    18961 gttcctctag ccccatagct taaaacacga tctgtttttc ttaattctct gtatttttgc
    19021 caagttgcgt gatctttaaa aagtatggtt gatgcacgca taagtgtagg attgactgat
    19081 cttacttcag cgccttgatc gcctctgcca caatgaataa gtttagtttt tgagttcatt
    19141 ttttctcctt tttaaagata gatataagtc ataataacat ttacaatagc cgctacaagc
    19201 ataggaatag ctgttctttt aaccacggca aaaggactta cttttgcaat agctgagata
    19261 gctaaaatcg ctggtgcaat aggactaaca catcttccaa agcccgtcat gatttgaatt
    19321 ggtgctatca tggtgatagt ttcaactcca aagtgttttg ctatatttgg gataagtgga
    19381 gcaaagctaa aaaatgccgc atttcctgaa cccattaaga aagcacaaac tgcaagcaag
    19441 attgaaacgg cgataataat agccaaaact ccaaatcctg catttttgca aaattctatt
    19501 aaagtatcta caaaacctac agataaaaga ccgcttgcaa atacttgacc acaaacgatg
    19561 agtgaaactg tgataacaaa taaatgtccc attcctttaa agaaaatcat aatagaatta
    19621 agagtttcta ctatactttt atagcgtatc atttcaaaaa taatagccac aaaagttgaa
    19681 atcaccattg ctactggaac attcatttta atggcagtgc tagcaactgc tttaacttct
    19741 tcagcactac ttattcccat taaaaccaag atgctatcaa gcacggaact aaatcctagg
    19801 attaaaacca aaggaattat aggtaaaatc gcataaattc taggaggctt tttaagttct
    19861 ttttctttac cttcattttc atttagttct ttttcaattt cttgtgcatt gaagacaaaa
    19921 ttatcttttt tgtcaaaaaa tttattgcaa agatatatcg caatacctac agctataatg
    19981 ataggcaagg ttgtagggag ttgataatga acaaaataaa ttgcaggatc aacttcagct
    20041 acttttgatg ccatgatcac atttccactt ccaggcccat gatcgatata ttgacaaata
    20101 gcaatcacac ttaaggcaga aagttttgaa acaccagagc gtacaagtat aggatacata
    20161 gtaaccataa gtaaaagtgc caagcctgcg tgagaaggga tgaaaagaac taaaaattgc
    20221 acgataaaat aagcaactat gagtaaaaca taaggagatt ttacggcttt taaaggtttt
    20281 tcaaaaactt taaaaagtgc ataagaagcc cctacatgat ccatataagc agaaaaacct
    20341 gctatagtca taagtgtaag tccaagccct gctaatgtac ttgacatggt ttgattgaaa
    20401 acttgaaaaa tatcaaaaaa acctaaattt aaagaacctt tagtgacaat gtgtggagaa
    20461 agtccaaaaa gagcagctaa ggaaagtaaa agtaaaccac ttaaaagcaa tgccatgtga
    20521 gcattgattt ttttataaag cataaaaaca agtaaaaaaa cactaaataa agaaaaaaca
    20581 atacctagca tgttttatcc tttttgagcg atgatctcta tctctacttt agcttttttt
    20641 ggcagatctt ttactgcaaa agcacttctt gctggataag gagctttaaa aaattcagca
    20701 taaatttcat taaatgctac aaaatcatta atatcagcta aaaagcaagt ggttttaatc
    20761 actttatcat aactgatacc attttcttct aagatagcac cgatattttt taaagattgt
    20821 ttggtttgtt ctttgatatc agagctttct atttctcctg aagcagggtt gataggaagt
    20881 tgtcctgata taaataaaag tccatttgct tccctataag ctgagtatgg accaatggcc
    20941 tttggatagt ttgacatgaa ttctcctttg ttaaatatag attaaacaga atgcatttta
    21001 tcactacaat aataatttgt caatagttta ttatcataat aataaaattt tatttttaag
    21061 aaatgtttta aagtataaag agtagaattt aatattatat taatttttta ttgaaggcag
    21121 ttttatggat gagggacaaa aacaacaatt tataaagttg acatattttt taggagaagt
    21181 tttaggtgag caatatgaga tagtttttca tgtaattact gaagatgggg cttatattgc
    21241 ggcaattgct aacaatcaca ttagtgggag aagtttagat tctcccttga ctgcttttgc
    21301 aagtgagctt atgcaaaata aaaaatattt agaaaaagat tttttatgtg attataaggc
    21361 tcttgttgga aaatcaaaat taattagagg atctactttt tttattaaaa atcatgacaa
    21421 attagtaggt attttgtgta tcaatcatga tactagcatt atgagagatt taatatgcaa
    21481 gatgattgat ttagaaaaaa ttggagatat gggtgatatt ttaggaaata ttagtttttc
    21541 tcaaaatgat tcaagcatag aaacattaag tcactcgata gaggatattt tagttcaaag
    21601 tgtagattct agttatttaa attctaatta tcaattaagc attactcaaa aagaagaaat
    21661 tgctgaaaag ctatatgaaa aaggtatttt taatataaaa ggagcggttc ctatcgtagc
    21721 aaaattttta aaaatttcag aacctagtgt ttataggtat ctgaagaaat ttaaaaaata
    21781 actaaaattt tttga
//
LOCUS       DARBAC010000015        21085 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.015, whole genome shotgun sequence.
ACCESSION   DARBAC010000015 DARBAC010000000
VERSION     DARBAC010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21085
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.015"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..392)
                     /locus_tag="SB799_000412"
     CDS             complement(<1..392)
                     /locus_tag="SB799_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEG0867677.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSICLFVVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEIL"
     gene            complement(389..1711)
                     /locus_tag="SB799_000413"
     CDS             complement(389..1711)
                     /locus_tag="SB799_000413"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEG0867678.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFSQ
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYNKEIIS
                     SRGELVEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAISENTALILKTHKSNF
                     ALMGFHSEVNIKDLHELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILIINQMENL"
     gene            1789..3462
                     /locus_tag="SB799_000414"
     CDS             1789..3462
                     /locus_tag="SB799_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002902449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0867679.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEVLVCNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYKARASVYDLGLDLEQSKEVQNRLILADSDTQTV
                     EFLKEHGFKVIALSSVEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAEDLSAVRK
                     DFTRQSGCYNLLNFENLEVLLEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDEKKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLALLQNSGANLVFYTDFVS
                     RGSNEAIVLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFACIECGKE
                     FATKKAVEKIANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMGFAGQN"
     gene            complement(3465..4766)
                     /locus_tag="SB799_000415"
     CDS             complement(3465..4766)
                     /locus_tag="SB799_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0867680.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFF
                     ILSYLFFAFSNSIVFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     SFSTFSENLGVVDIYKNSKNLVVKFDSKLINKEELEGKIKI"
     gene            4933..5535
                     /gene="rdgB"
                     /locus_tag="SB799_000416"
     CDS             4933..5535
                     /gene="rdgB"
                     /locus_tag="SB799_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEG0867681.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSDKGDDKSNR
                     DKLVNEMIKKGFNQSRAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            complement(5566..8037)
                     /locus_tag="SB799_000417"
     CDS             complement(5566..8037)
                     /locus_tag="SB799_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HEG0867682.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNNLIEKRDLASDEKEKDQIRLAIKEHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPK
                     AKVERIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYGISVLAIILALIGIL
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNTSDTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGENINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     ILVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMVSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQYKEHILKQ"
     gene            complement(8037..8606)
                     /locus_tag="SB799_000418"
     CDS             complement(8037..8606)
                     /locus_tag="SB799_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEG0867683.1"
                     /translation="MKKIFLILTLFFNAFALQLDEISSTMQKNIDASLKLLQDSKEDK
                     KQAANGIFKLFDSIIDYKLMAKLSLSKNYSKLTPKEQEKFTAAFETSLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSTVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            complement(8616..9314)
                     /locus_tag="SB799_000419"
     CDS             complement(8616..9314)
                     /locus_tag="SB799_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEG0867684.1"
                     /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNAITPEFIRLGARNFFDNLLAPLRFVGNVLQFKFEE
                     AGEEFKRFAANTIMGFGGLMDVASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYTSFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            complement(9359..9802)
                     /locus_tag="SB799_000420"
     CDS             complement(9359..9802)
                     /locus_tag="SB799_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEG0867685.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKKDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFALNSIHYDDTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKIATIFYKKTALLKPDFKVKEATEWVDFYWDINLD"
     gene            complement(9816..11135)
                     /locus_tag="SB799_000421"
     CDS             complement(9816..11135)
                     /locus_tag="SB799_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEG0867686.1"
                     /translation="MDFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAV
                     FISSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFIFGVLVSSIIAWIFHLDNASFPVQIF
                     SLPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLTALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            complement(11145..12209)
                     /gene="mqnE"
                     /locus_tag="SB799_000422"
     CDS             complement(11145..12209)
                     /gene="mqnE"
                     /locus_tag="SB799_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEG0867687.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKGKQSNATMLFGHIEER
                     HHRIDHMLRLRDLQDQTGGFNAFIPLVWQRDNSFIQTDKIMDSEEILKTIAIARLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            12352..14700
                     /locus_tag="SB799_000423"
     CDS             12352..14700
                     /locus_tag="SB799_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEG0867688.1"
                     /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKK
                     AYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNESISLIFVYKDIKAFHLKPM
                     IKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSIIQTRFICGSRILFKGIKTKFES
                     ILKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLESLLVLFKTSPKNY
                     ALNFIDEKNLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLINVHDLSELMYKKAKKHF
                     GANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLKQEYKFKTLVEVLEYLLKLEDK
                     QVIFDLNLVFALRRLKYSKKDIEKALILFEKIFYKRHSFCVLKLLLDSGILKDLCKPF
                     WTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQKLKTDEKMILKLVILLSAIES
                     ENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSK
                     LENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESARRVKKE
                     LTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDIVMISKLAKENDFKFWFSNETN
                     LSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDDKIYLRFEYDNIISDEQKLKLCE
                     LLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNVFNEL
                     ELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVNLLISE"
     gene            14705..16501
                     /gene="glmS"
                     /locus_tag="SB799_000424"
     CDS             14705..16501
                     /gene="glmS"
                     /locus_tag="SB799_000424"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEG0867689.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDVLKSLSFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MIITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            16636..18027
                     /gene="fumC"
                     /locus_tag="SB799_000425"
     CDS             16636..18027
                     /gene="fumC"
                     /locus_tag="SB799_000425"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEG0867690.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFVSSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVGEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(18057..19100)
                     /locus_tag="SB799_000426"
     CDS             complement(18057..19100)
                     /locus_tag="SB799_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEG0867691.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITM
                     FYGYDGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(19104..20111)
                     /gene="ruvB"
                     /locus_tag="SB799_000427"
     CDS             complement(19104..20111)
                     /gene="ruvB"
                     /locus_tag="SB799_000427"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEG0867692.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYEKTLFE
                     E"
     gene            20202..20612
                     /locus_tag="SB799_000428"
     CDS             20202..20612
                     /locus_tag="SB799_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HEG0867693.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            20613..20971
                     /gene="ssrA"
                     /locus_tag="SB799_000429"
     tmRNA           20613..20971
                     /gene="ssrA"
                     /locus_tag="SB799_000429"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         7394 a         3089 c         3401 g         7201 t
ORIGIN      
        1 tctaaaattt ctacactttt ttgctctata ttttcacaaa gatcacattt gctaagcact
       61 aaaatgatat ttttaatatc aagaattttt aaaatttcta aatgttctaa actttgttct
      121 tttaaaccct cgttaatatc tacgacaaat aaacaaatac taaagccaaa agctccactt
      181 accatagttt taaccaaatc tttatgccct ggaacatcga taaaagaaat gtttttatct
      241 tttaatttaa gatttgaaaa acttaaatta atggtgattt gtctttcttg ttcttctttt
      301 aagctatcgc cttcaaaacc atttaaagct ttaatgagtg aagtttttcc atgatcaata
      361 tgtcctgcgg ttcctataat aacagatttc ataagttttc catttgattg attataagaa
      421 taagtttttg aagttcattt tctcgtatag ttctaaaatc aagaacaaat tcatcatttt
      481 caatgcgtcc tatgatattt tcttttctaa atcgagtttg tagttttaaa gcatctcctt
      541 gaaaagtcag tatataagta tctaaacttt tatcaggcat agaacctcct cctactaaac
      601 ttttgctttt tttaagctgg gtttgaaatt ttaattcttt ttgcactctt aaagcttttt
      661 tttctataaa ggataagtca tcatttaaaa gttttaaggt aataattttt tcataatctt
      721 tttgcaaata agcttttaag ctttcgttta aaaaagatag agttaattta tccactctta
      781 gcattcttaa aagttgattt tgtttaagtt tttctatgag ttcttttttt ccaagtataa
      841 tgcctgcttg cacactacca aaaagtttat ctccactaaa acttaaaata tcacattctt
      901 gtacgagttt tttgatttta ggttcatttt taatcagttt ttcatttaaa ttttcacacc
      961 agccagaacc tagatcataa taactcaaaa gccctttttc ttttgctagt tcatgtagat
     1021 cttttatatt tacttcactg tgaaaaccca taagagcgaa attagacttg tgggttttta
     1081 aaattagagc ggtattttca ctgatagctt gttcatagtc ttttaagtgt gttttgttgc
     1141 tagttccaac ttcgcaaagc tttacacctg cagcttttat tacttcaggc acgcgaaaac
     1201 tgccaccaat ttctacaagt tctcctcttg agcttatgat ttctttattg taacaaagag
     1261 aattaagtac taaaaaaact gccgcagcgt tgttattgac cactaaagca tcttcgcatt
     1321 caaaaagcat tttaagtttt tctagcacca aagcatagcg agagcctctt tttccatttt
     1381 ctaaatcaaa ctctacatta gaataattac aaatgatatc tttacacgct tcataaagtt
     1441 cttcatggat tacacttcta ccaaggtttg tatgtataac cactccgctt gcattaatca
     1501 cactttgtaa atctttgcgg taaaaagttt tgatttcttt tttgatttct aaaagtagtt
     1561 tatctttaga aatttcatct tgggaaaaat tttcttttag ttttgcgaca acttttttac
     1621 aaaaaaatgc tttgatataa aaaggatagg attttaaact ctcatcttca ataagagtgt
     1681 taatttgtgg aaaagttcta aatttgttca tcttaagcct taagaaaata tttggttatt
     1741 ttaacataga atttataaaa tgatgtttta aagagattaa ggaagataat gcaagatttt
     1801 gtttatataa aaaatgatgt tttaatccct ttgcccgatg ctattgaaat tttagatcag
     1861 gcaaatgata aagaagtatt agtttgcaat gataaaaatc aaaaagcaca aatttatgcc
     1921 cctgagatta atttttatct taaaaattct caagatgaaa ttttagagca aagtaaaaat
     1981 gttttaacgc tttataaagc aagagctagt gtttatgatt tagggcttga tttagaacaa
     2041 agcaaagaag tgcaaaatcg tttgatttta gcagacagcg atactcaaac cgtagagttt
     2101 ttaaaagaac atggatttaa ggttattgct ttaagcagtg tagaaatttt agctgttttt
     2161 ggaagtgtag gggagctttg tgctgtggtt aaaaatcaag gcgaagaagt ggaaatagat
     2221 tttgattttt tactttttaa agctgaggat ttaagcgctg tgcgtaaaga ttttacaaga
     2281 caaagtggat gttataatct tttaaatttt gaaaatcttg aagtattgtt agagtttttg
     2341 caaagcaaaa gtccaaaata tcattataaa acttatatta gctataatgc tagcgtgtgt
     2401 caataccacg aaagacgcag tgagcattgt gcaaaatgtg ctgaaatttg tcctactgtg
     2461 gcgattttaa aagatgatga aaaaaagcat ttagaatttt ctcaagtgga ttgtttgggt
     2521 tgtggaggat gtattagcgt gtgtcctagc ggatcacttg attatgctcc tatgccaaga
     2581 gaaagttttt ttaccctttg tgagttttat aaagataaaa aaattttaat cattcctaaa
     2641 aaaatgtctt tagaaaattt aaatcttgct ttaccaaaag atgttttacc ctttatgata
     2701 gagggtgaaa aatggctttc ttctatgcat tttttagccc ttttgcaaaa tagtggagca
     2761 aatttagttt tttatacgga ttttgtatct cgtggtagta atgaggctat tgtgctttta
     2821 aatacttttt ttgagagaaa atttcaaaaa aaagctattt ttgttgctaa agatgaaaaa
     2881 gaattgcaaa atgttttaaa agagcaagaa ttcatacaag atttaaaata tgattttcat
     2941 aacaacacct taactacaag agaaaatttt gccaaaagaa tgcaagaaat gataaaaaat
     3001 gaagattttg gcagtataga aagtggcgaa tggttgcgtt atggtaaggt agaaatcaat
     3061 cctaacacct gtacgctttg tctttcttgt gtgggtgcct gtaatgtagg agctttaatc
     3121 gctgataaac aagaaaatgc tttgaaattt aatgcctctc tttgcacgac ttgtgggtat
     3181 tgtgagttaa gttgcgctga aaaagatact ttaaaattat ttcgtagtgg aatggagttt
     3241 agagcttctt attttgaata tcaaaccatg gcaaaagatg agctttttgc ctgtatagaa
     3301 tgtggtaaag aatttgccac caaaaaagct gtagaaaaaa tagccaattt aatgaaacct
     3361 aaatttggta atgatgagaa taaaatcaaa acactttatt gctgtgcaga ttgcaaggca
     3421 aaagtgatga taaaagcaat gggttttgcg gggcaaaatt agatttagat cttaattttg
     3481 ccttctaatt cttctttatt tataagtttg ctatcaaatt taacaacaag atttttagag
     3541 tttttataaa tatctacaac ccctaaattt tcactaaaag tactgaaact taaaggcgtt
     3601 tctaaaggta gataaaggtt tttaaaatca gctggatttt ttaagaaaaa taatgccaca
     3661 agccaaatta gagctaaaat tactaaaata atagccaaaa gatttaaggc atctagatgt
     3721 aaaaatatcc ctccgataat accacctata aaacttccac catatccaaa agcattaaac
     3781 aaccctaatg ctgcaccttt ttcatgaact ttacaaaatt ttgatgcaca actttgcata
     3841 ataggttcgt gtaaattaaa acctataaaa aaaatcacaa ctgctatgat aaaaaaaact
     3901 atagaattac taaaagcaaa aaaaagataa gaaagtatga aaaaaacaat tcctaagagt
     3961 aaaatttgtt tagctaaacc tcttttttcg cctaaacttc cagcaaagcc catagcgata
     4021 aaacctgcca ccatagaagc gctataaaca atccaaagtt tatcagaagc aaagcctaaa
     4081 tgttttacta gaataatagg aatacttaaa aatgctatac tcataagcat tttttgcatg
     4141 aaattagtaa gattcataag ggctaaattt ttttgtttaa taagatgaaa aaaaggagtt
     4201 ttttcatttt catgagtgat tttgttttct ttaggtacaa cggtataaag taaaattata
     4261 cataaaagag acaaagctgc actaagatca aaaaggctag ataaacccca ttttgcactc
     4321 attaaaggag agattaccat agaagctgca aaactaagtc ctataaaaga acccattact
     4381 gccatggctt taccacgatt ttcttctgtg ataaaatcac ttatcattgc tgtagccaca
     4441 gctccaatag cccctgcacc ttggagcatt ctccctaaaa gcatggtgta aatattttct
     4501 gcaaacgagc agattaaaga gcctattata aaaataatca gtccaatgag catggttttt
     4561 ttacgaccaa ttttatcact taaaatccca aaaggcattt gtaaaatcat ttgggttaag
     4621 gcgtaaacac caactaaaag tcccactaaa aattcattag caccttcaag ttttaaagca
     4681 taaagactta aaactggcaa aactataaaa agcccaaaaa atcttgttcc aactatgaaa
     4741 gataagggta agacattatt tagcattatc aatttcctat taaatttgaa atttaaatta
     4801 ggataatttt actatgaaat ggattaagca ttgattaaca tcgttttatc atttgatatt
     4861 taaaagctac gcacaaggat aaattttata aaatcatatt tttgtttttg atattatttt
     4921 ggagcttttg ttatgaagat tatcctagct acgagcaata aacataaagt tttagaactt
     4981 aaagaaattt taaaagattt tgaaatttat gcttttgatg aagttttaat gccttttgag
     5041 attgaagaaa atggaaaaac ttttaaagaa aacgccttga ttaaagcaag agcggttttt
     5101 aatgctttgg atgaaaagca aaaaaaagat tttatcgctt taagtgatga tagtggcatt
     5161 tgtgtagatg ttttagaagg aaatccagga atttattctg ctcgatttag cgataagggc
     5221 gatgataaaa gtaaccgtga taaacttgtc aatgaaatga taaaaaaagg ttttaatcaa
     5281 agcagggcac attatgttgc tgctattgct atggtgggtt tgatggggga atttagtacg
     5341 catggaacca tgcatggaaa agtaatagat acagaaaaag gtgaaaatgg ttttggttat
     5401 gatagccttt ttattccaaa gggttttgat aaaaccttag cccagcttag cgtggatgag
     5461 aagaataata tctctcatcg ttttaaagct ttagagcttg caaaaatcat tttaaagatt
     5521 ttaaataaag gataaaaatg aaaaattttt taaaatatat agctattatt gttttaatat
     5581 atgctcttta tattggtttg gaaacttggt tttcttagaa taaatagtga ttaaaaagct
     5641 tggtaataag aacaaacttc cacttaaaag caaaatcatt acaaaaacgg ttaaaattcc
     5701 aaaataaatt gttggaataa aattgctact caccataaca ctaaaaccta aaactatgct
     5761 aattgtggta taataaagtg ctgaacctat actaaggtga gaaatcataa tggcttcttc
     5821 taggcttttg tttttaattt cttctctaaa acgataaata taatgtatag catcatcaac
     5881 acctatgcct atagcaatag cagctatagt aatactcatc atatccaaag gaatacctaa
     5941 aagccccata agagcaaaaa ccacacttaa aggaataaca tttaccaata tagccgcaac
     6001 tgaaaatttt aaatctctaa aaacaatgat aaaaagtata aaaatagcta aaattacaaa
     6061 tataagagta tcaaattgcg atgaaaaaag actttggagc atattattat aaagcaccat
     6121 tatgcctgtg atttgaactt ctactccatc gttttttaca agctcgttga gctgtttttt
     6181 aagatctatt aaaaactcat tacgtcttaa attcggatca gaatcaacaa tacgcatgct
     6241 aaatcttaac tcgttatttt ctatgcttac aaaaggtgaa agcaagtctt gtttaaattt
     6301 agcaggtaaa ttctcattta aaaacgcaag ggcaaaatca tctaactctt ttccatcgtt
     6361 gatattttcc cctagggtta aaagactatt aagacttaaa accgagccta caaattcttt
     6421 gttttctaaa aattcatgaa ctttttttgc aatacgtgtt tttttagagt caaaccaata
     6481 agtttcttgt gtggctaaat tttcaaattc actttcaaaa ctatcaagag tatcacttgt
     6541 attttgatcg tttttattat ttggaaaacg aatgatgact tctaaaggca aggttccacc
     6601 tagattttta tcaataacca aaagtccttt tttgatttca ctaccatctt tgaaataatt
     6661 gacaaaagaa ttttcaactc tgagttttaa aatgcctatt aaagctaaga ttatagcaag
     6721 aactgaaatt ccataaatca tgcgacgctt tttaggatca agagcggttt tggcgcaaaa
     6781 ggctaaaaga ttaaatttaa actctttttt atgataattt tttggtttta aaagaactaa
     6841 gatacttgct aaaaacaaat aactaaagat aagagctaaa cctataccta tactcatcat
     6901 aatgccaagt tttatgatag gttcgatatt tgataggatt aaagaaaaaa atcctatcat
     6961 cgttgtaaca atggcataaa ggctaggatt tgctttggct agtaaggttt caagcactat
     7021 gcgctcaact ttagctttgg gatgattttg ggtgctttcg ataaaatgcg tgatcaaatg
     7081 aacaactaca cttaaggtga taattaaaac caaagcaaca taatttgatg aaataactgt
     7141 gatttgaaaa tttaaaagtg caaaaactcc gctagctgca cttaagctta taaaacaaat
     7201 aaaaagaggt aaaaaaacaa aacgccatga acggaaaaaa taataaagtg caagtcctag
     7261 taaaaacaca agagaaacac cataaagcac aagatcagat tttatataag ctatcatatc
     7321 atcagcgatc atgcttacgc caccaaggta gagcgtatct ttattttttt cataatttcg
     7381 aactatgctt ttaatagtat ctagactttg tttcgtgata actttttgct tgtcttgatg
     7441 ttcttttatg gcaagacgaa tttgatcttt ttctttttca tcactagcaa gatcgcgttt
     7501 ttctataaga ttattataaa ctgtatcagg ctttaagtaa ataataagcc ctgttacttt
     7561 tccatctttt gagatgatat tatttttata aaagggacta tttaaaattt cattttgggc
     7621 ttttgtgcgg tttatatctt ggctttctat atttgggata ttttttaaaa gttcttttaa
     7681 atccgtattt tgcgaacttt gaagcaaagg ggcattgatg atactaaaaa cgcgttctac
     7741 taaaggggct ttttctaatt cttcatgaag tttttttaat ttggctaaat tttcatttga
     7801 aaaaggtttt tcatcatagg gtttgaaggc taaaagtaaa aaattatcac ttttataatg
     7861 ttttgaaatt tctctaaaag tttttaaatc tgcatcatct tctaaaagta aactttcagc
     7921 acttgcatct acactaagct taaaagcaaa aaagcttaaa aacagacata taaacaaggt
     7981 tccaaaaaaa gtactttttg gacgagaaat aaaaaacttt aaaagctttg caaacattat
     8041 tctatgacaa tactttcaag tttttgaagt agggcatcaa agccttggtt ggctaaaata
     8101 tctccaaatt gtgatctata agtttgtact atactcacac ctaaaacatc tacatcataa
     8161 ataagccagt tgttattatc attgtaaaat ttgaaaatga tatttttttc ttccccatct
     8221 actaccgtag aagtggttaa aaaataacgt ttttcatttt ttaactcacc atttttgacc
     8281 tttaaaacct gatctttata aagactgagt ttatcggtaa aacttttttt aagacttgtt
     8341 tcaaaggctg cggtaaattt ttcttgttct tttggggtta atttagaata atttttcgaa
     8401 agactcagtt ttgccatgag tttataatct attatgctat caaaaagttt aaaaattcca
     8461 ttagcagctt gttttttatc ttctttacta tcttgtaaaa gttttaagct tgcatcaatg
     8521 tttttttgca tagtgctaga aatttcatct agttgtaagg caaaagcatt aaaaaataaa
     8581 gtcaagatta aaaatatttt tttcattaat ttcctttatt tgctaagttc attgcgtctt
     8641 tgctcgtaag catcacgcaa gaatggatat aaattaggcg tgttgtgata aatttcatca
     8701 atttcatcaa gcctaaaact aagttcatta ccaaatccat aagcacttat agctatactt
     8761 gcccaagtag gatcaatgta agcggtaaaa cttgtatacc aagttgcagg taaagtaaga
     8821 gtgtctctaa gattactagg gccgagtata ggtaagacaa tatgaaaacc gcttcctaca
     8881 ccccagtgag ccaaaacagt tcctaagtcc gcgggatgtt ttttaagacc catttttgat
     8941 gccacatcca taagtccacc aaagcccata atagtattgg cagcaaatct tttaaattct
     9001 tctcccgctt cttcaaattt aaactgcaaa acattgccta caaaacgcaa aggagcaagt
     9061 aaattatcaa agaaatttct tgcccctaat cttataaatt cgggagtgat agcgttatag
     9121 cccttaagaa cgggacgcaa accataatca tacaaagcca cattaaaact tgtcatagct
     9181 ttgttatatc ctgaaagtgg atcgtttact tgatagtttt ggtattcttg ttcaaaatca
     9241 tctaaatttt gttctttagc aaaagcaaaa atagtaaaaa aaattaaaat aaaagatata
     9301 aattttattc tcaagcaaaa actcctaaaa attttaaaag taaaattata gcaaattttt
     9361 aatcaagatt tatatcccag taaaaatcca cccattcagt agcttctttt actttaaaat
     9421 caggcttcaa aagagcagtt tttttataaa aaatggttgc aattttaagt tctatatgag
     9481 gaaatttttc aagcaaaact ttttttattt ctgctaaact ttctccacta tctactatat
     9541 catcaatgag tagaattttt ttgtgcttgc ttaaatcagg aatgttaaaa atttcaattg
     9601 tatcaagttt ttttgtatca tcgtaatgaa ttgagtttaa agcaaaaagc tgacgcgttt
     9661 ttaaagccac tgctaaagaa tgccccaaac tcatccctcc tcttgctata gctaaaagtg
     9721 catcaggatt aaaatctttt ttaatttctt tagcaagaat ttttacatct tctttaaatt
     9781 cttcatagga gtaaaatatc attatatatc cttatttatt gtagtgccat aagtaaaaaa
     9841 ttacccaaag ataataaact taaaactata atgccaagat tgattttatc ccattcgcgt
     9901 ttaaaaattc ttacaagtaa ataagaaaga aaaccaaaag caaaacctgt ggtgatggag
     9961 taagtaaaag gcatcatgat aatagtaaaa aagcttgcta cagctatagc actatcttta
    10021 aaatctatat ttttaacttc cataaacatt aaaattccaa ccattacaag tacggggtat
    10081 attgcgtttg caggaatggc tttaaaaagt ggcagtaaaa aaagtgtaaa agcaaaacaa
    10141 atagctacaa ctaaagctgt aagcccagtt cttcccccgc tttcaacccc tgtagtgctt
    10201 tctacaaaag ctgtaactgt agaagtgcct gtcatagctc ctaaagccga tcctgttgca
    10261 tctgccatta atgttttgct tagttttttt tctccatttt ttggatcatc aaaaatcttt
    10321 cctctttcac ccacacctgt gatagttcct atactatcaa aaagttgagt gataaaaaaa
    10381 gtaagaatta taggtatcat agtaatattt aaggcacttt tgatatcaag ttgtaaaaag
    10441 atggctccta ggccattttc catgctaaaa tttggcaaag aaaagatttg cacaggaaaa
    10501 cttgcattgt ctaaatggaa aatccaagcg ataatagagc ttactaatac cccaaaaata
    10561 aaagctccgc gaagttttat agcccaaaaa aagatgatta aagctagagt gaaaattcca
    10621 aaaagcacat gaggactttt gaaatttcct atgcttacta aagtatcttt attatgcatg
    10681 atcacaccca tttgacttaa gcctaaaaaa gctataaaac aacctatacc cgcacaaatt
    10741 gcaaggcgta aatcttttgg gatattgcgg attacccaaa ggcgaaaatg cgtaaaagaa
    10801 agtatgagaa aaataatact tgaaataaaa acagctccta aggcactttg ccaagctatg
    10861 ttttgaccta aacaaaccgc aaaggtaaaa taagcattta aacccattcc tacactcata
    10921 gctacaggag tattggcaaa aaaagcatta aaagcacttg caactatggt gattaaagct
    10981 gttgcggtga ttaaagcttc tatgggcatt cctgtatttc ctactatgct agaatttacg
    11041 gggataatgt aaaccatagc caaaaaagta gtaagccctg ctataacttc ggttttaaaa
    11101 ctcgtattgt tttctttgag tttaaaaaag tccatttttt ctccttagta ggtttttagc
    11161 tcgttatata aactatcgcg ttctacagga ataagatttg aagtttttat catatcgata
    11221 aaagttttta aacttgtgcc tttagcagat tttgcaccac ctgcactttg tatgctttct
    11281 ttttctatgg taccgtctaa atcattagct ccaaattctt gtgctaccat ggctaaattt
    11341 aaagtcattg ttgcccagta agctttgata tttttaatat tatcaagcac taaacgagca
    11401 atggcaatgg tttttaaaat ttcttcacta tccatgattt tatcagtttg tataaagcta
    11461 ttatcccttt gccaaactag agggataaaa gcattaaatc caccggtttg atcttgaaga
    11521 tcacgcagtc ttaacatatg atcgatcctg tgatgtcttt cttctatatg cccaaaaagc
    11581 atggtagcat tactttgttt gcctttttca tgccaaagtt tatgaatttt aagccaattt
    11641 tcactgctaa cttttccatg acaaattttc ttacgcactt cttcatcaaa aatttcagcc
    11701 ccaccgcctg gcatggaatc aacgccgtat tcaagcattt tttctatcac ttcttcatag
    11761 ctcattttaa aacgacgatg taaaaaatca atctcagcag cagtcatagc ttttacatga
    11821 agattaggat atttttcttt tatcatttta aaaatttcta aataccattg ccaagttgta
    11881 tctttgttgt gagctgaaac gatatgtact tctttggttt ctcgttttac ggtttcatcg
    11941 acaattttca taatctcttc atgagtcatc aaataaggat taggattttt acggtgtgct
    12001 gaaaaggcgc aaaatttaca ggtatctgca cagatattag ttgggttgat atgacgattg
    12061 atattaaaat aaactttttt tccatgaagt ttggtgcgtt ttttgtgagc gtatttgcct
    12121 aaggtaaaaa gatctagatc ccaaagtgca ttggcttctt cttggtttaa tctttcttca
    12181 ttttctagtt tggtaattaa atttttcatt ttaattttac tcttttgctg tttttaaata
    12241 aagcattata atttttgctt actgaaaaag agtttataga aaaagccaaa ataaaagata
    12301 tttttgttaa gattattatt aaaatattaa aatttaaaga gagtagaaat tttgttaaat
    12361 aaagaattag aaatttttaa aaaaaatctt agttcctata cccaaagttg tagaaaattt
    12421 tttcttaagc aaggggcgtt tagcttatat cattctaaaa atatggataa tttcataaaa
    12481 aaagcttatg atatagttct taaagattat tttgatgatt tttcacctcc aagtgataat
    12541 atcccttttt gtgttttagc aagcaaagca tatgcaaata atagtctttg ttttaatgaa
    12601 agtatttctt tgatttttgt ttataaagat attaaggctt ttcatttaaa acctatgatt
    12661 aaggctttta tcgaaatttt aaatgatgcg catttgcaaa ttgactctgt tatcttagaa
    12721 tttaacggac tttataatgc tagcaatgag cttaagactt ctataataca aactcgtttc
    12781 atatgtggtt ctaggatttt atttaaaggg attaagacaa aatttgagag tattttaaaa
    12841 gaaaataaaa atgattttgc caagcttttg ctagaaaatt ttaaagaatt tgatattcca
    12901 tttataaagc aggaatttaa tatcttaaaa gattttggcg gattaaatca tttaagatcc
    12961 ttagagagtt tgcttgttct ttttaagact tctccaaaaa attatgcctt aaattttata
    13021 gatgaaaaaa atttaagtga gttgcgttta gctggagatt ttttactttc tttaaaatca
    13081 gcgatgaatt tattaagcgc taaagatgag gatgagtttt tacttattaa tgttcatgat
    13141 ttgagtgaat taatgtataa aaaagctaaa aaacattttg gagcaaatga gttgttggtt
    13201 caaaaggctt tgcaaagtat gcatactata ggtttttata cgcactttct agcaaagcaa
    13261 attcaagatg gattaaatca tactcttaaa caagaatata aatttaaaac tcttgtggaa
    13321 gttttagaat acttattaaa acttgaagat aaacaggtta ttttcgatct taacttggtt
    13381 tttgccctaa gaagattgaa atacagtaaa aaagatatag aaaaagcttt aatacttttt
    13441 gagaaaattt tttataaaag gcatagtttt tgtgttttaa aacttttgct tgatagtgga
    13501 attttaaaag atttatgcaa gcctttttgg acagttcgtt ttttaagcga tgaagaagga
    13561 aattatagtt ttgatgagca agtttttctt atgttaagtg aatttgaaaa atacgaagat
    13621 gagcttgaga tactccaaaa acttaaaacc gatgaaaaaa tgattttaaa gcttgtgata
    13681 cttttaagcg ctatagaaag tgaaaatgaa atttctttag caggcatata tagagcgtat
    13741 tgctccaaat ttgatttaaa gaatgaaatt ttagaatggg gtcttaagat atttaaaaac
    13801 aataatgcct taaaagatct tgtagaaaaa gaagatatat acaatcctat tgttgtaagt
    13861 agcttggttt ctaagctaga aaatttagaa aatttagagc ttttatacac tttaacttgg
    13921 ctaaaggcta aggctttaaa ttataatgct ttttatttta gagttcttga taaactttta
    13981 gaaaatgcaa aacaaggttt tgaagatgaa aatctacttg aagaaagcgc aagaagagta
    14041 aaaaaagaat taacacttaa aagaagtaag atttttttag agcaagatga aattttgcaa
    14101 gataaaatca tacatatcaa atcaaatctt tttattataa aaaatacttt tgaagatatt
    14161 gttatgattt ctaaattagc caaagaaaat gattttaaat tttggtttag caatgaaaca
    14221 aatcttagtt tgcaaattgt tgcaccactt cattttaata ttgccattat tttaagttct
    14281 ttaacaaatt taaatcttat tttcatgaat ttttttgaac tttttgatga taaaatttat
    14341 ttaagatttg aatatgataa tattattagt gatgagcaaa aactaaaact ttgcgagctt
    14401 ttaaattcaa atctttctgg ttttaatttg aaaaaaatta aaaagccaat cattaaaaaa
    14461 gatgagttaa aattagactt aaattattct aaaatgtatg ccaaattagg tcttaatact
    14521 aaagatcagc aaggtttaat ggcgtatttg atgaatgttt ttaatgaact tgaacttgtt
    14581 ttatgtgcag caaaaattca aaccataaga caaaggacgc gtaatatttt tatttttcaa
    14641 aagaatgaaa aattagaaca tagcgagcaa aagttagtta atttattaat aagtgagtaa
    14701 aaaaatgtgt ggaatcgtag gctatatagg aaataatgaa aaaaaacaaa ttatactaaa
    14761 tggacttaaa gaattagaat atcgtggcta tgatagtgcg ggtatggcag tgatgcaaga
    14821 aggagagctt agttttttta aagctgtagg aaaacttgaa aatttggcga ataaatgcac
    14881 ggattttgaa agtcaaggtt atggttttgc tataggtcat acaagatggg caactcatgg
    14941 taagcctact gaaatcaacg cacatcctca tttaggacag tattcttgtg tgattcacaa
    15001 tggtattata gaaaattata aagaaatcaa agataaactt gaaaaagaag gcgtgagttt
    15061 tttaagtcaa acggatactg aagttattgt ccagcttttt gaattttatg caagaaattt
    15121 gggagttttt gaagcttggc aaaaaaccat caaagaactt cgcggtgctt ttgctacttt
    15181 gttagtaaca aaaaaagatc ccaatcatgt gtattttgca aaaaatgctg cccctttgat
    15241 tatcggtaaa aatgcaaata aagaatggta tttttcttca ggtgatgcac ctttgatagg
    15301 aagttgtgat gaggtaatgt atcttgaaga tttaagcttg ggatacgcga gtaaagatga
    15361 gcttgtcgtt tatgaaaatg atgttttaaa atcactttct ttttctaagc tttcaggtga
    15421 taaggcttat gcaaaaaaag acggctttcg tttttttatg gaaaaagaaa tttatgaaca
    15481 aagtcgtgtg atgagtgaag tgttaatggg acgtattcaa ggcgatgaag tcgtttttga
    15541 tgagctaaat aatgaagatt taagtcaagt agatgaaatc acgctttgtg cttgtggaac
    15601 aagctatcat gctgcaatgg caagtgctta tttgtttgaa agaattgcta aagttaaagc
    15661 taaagtagaa attgcaagtg aatttcgcta ccgtgaagca attataaaaa aagattcttt
    15721 atttatcgtt atttctcaaa gtggagaaac agcagacact ttagaggctt taaagattgc
    15781 aaaagagcag ggcgctaaga cttttgcaat ttgtaatgtg gataattcta atatagtgcg
    15841 tttagcacac ctaagtcttt taactcgtgc gggtatagaa aaaggagttg cttcaactaa
    15901 agcttttgcc actcaggttt taacactttg gatgcttgct atttttatgg cacaaaaaag
    15961 aaatttaaat gtttctgctg aaattaaagc acttttgcat actccaaatt gcgtgagtgt
    16021 aaaacaggct ttacatgaaa aaattcatcg tttatctaag cgttatttag atggacatgg
    16081 ctttttcttt ataggcagag atgtgtttta tcctttggct ttagaaggag ctttgaaact
    16141 taaagaatta tcttatcttc acgctgaggg ttatcctgca ggagagatga aacatggccc
    16201 tattgctttg gctgattcta agctttatac tatagcttta atgccaaagc acatgcttta
    16261 tgaaaaaaca aaatcaaatg ttgaagagct tattgctagg gattctacag tgcttagcat
    16321 ttcaccttta gaatttgatt taagtgatga ttttataaaa accaatgagc aagatcatta
    16381 tatgtgtgaa ttttttgaaa tgatgatcat tactcaactt ttggcgatgg aaatttccat
    16441 aagacttggt aatgatgtgg atatgccaag aaatttggct aaaagcgtaa cagtcgaata
    16501 atccgtgcag tttaaataaa ctgcacataa ctttcaaata cttcaaaaaa atataaataa
    16561 attttaaatt ataagctaac tttatgctta tttttgttta aataattcta acaatatttc
    16621 tagaaaggaa acactatgga atatagagtt gaacacgata ctatgggtga agttaaggtc
    16681 ccaaatgaca aatattgggg agctcaaact gaaagaagtt ttgaaaattt caaaatcggt
    16741 tgtgagaaaa tgccaaaggt tttaatctat gcttttgcaa atcttaaaaa atctttagct
    16801 ttagtcaata acaaacttgg caaacttgat gatgctaaga aaaatgctat agttcaagct
    16861 tgcgatgaga ttatcgcagg taaatttgat gataattttc cacttgcgat ttggcaaaca
    16921 ggttcaggca cacaaagtaa tatgaatatg aatgaagtta ttgcaaatcg tgccactgaa
    16981 atcatgggcg gagattttcg caaagaaaag cttgtacatc caaatgatca tgttaatatg
    17041 agtcaaagtt caaatgatac ttttccaact gctatgagta tcgttgcggt tgagcaagta
    17101 gagaaaaagc ttatccctgc gcttgatgag cttattgcaa cttttgaaaa aaaagtaaaa
    17161 gaatttgatg gtattatcaa gataggacgc acgcatttac aagatgctac gccacttact
    17221 ctagcacaag aatttagtgg atatctttct atgcttttgc attcaaaaga gcaaatcatc
    17281 gcttctttac caactttaag agaacttgcc ataggaggaa ctgcagtagg aacagggctt
    17341 aatgcacatc cagaattaag ccaaaaagta agtgaagagc taactcaact tataggtacg
    17401 aaatttgttt caagtccaaa taaatttcat gctttaacaa gtcatgatgc gattaatttt
    17461 actcatggag ctatgaaagg tttggctgca aatttaatga aaattgcaaa tgatataaga
    17521 tggttagctt caggcccaag atgtggtctt ggtgagctta tcatccctga aaatgagcca
    17581 ggaagttcga ttatgccagg taaggtaaat cctacccagt gcgaagctgt tactatggtt
    17641 gctgtacaag tgatgggaaa tgatgcagct atcggatttg cagcaagtca aggaaatttt
    17701 gaacttaatg tgtttaagcc tgtgattatt tataatttct tgcaaagtct tgatttgttg
    17761 gctgattcta tgcattcatt caatatccat tgtgctgtag gtatagaacc aaatcgtgca
    17821 aaaatcgatc ataatcttca taattcttta atgctagtta ctgctctaaa tccacacata
    17881 ggttatgaaa acgctgctaa agtagccaaa aatgctcata aaaaaggtat ttctttaaaa
    17941 gaaagcgcaa tggagcttgg tttggttggc gaagaagatt tcaataaatt tgttgatcct
    18001 actaaaatga taggcccaaa agcctagaac ataaaacttg ccttttttaa ggcaagttaa
    18061 attaaattct tatcttttaa aatcacatac attcttaaag ttgatacaaa aaaggttaaa
    18121 atcgcaggac ctagtataat accccaaaaa ccaaaggttg aaattcctgc tatcatagcc
    18181 aagaaaatta aaagttcgtt gattttggta ggggttttta caagtttttt gttgatccat
    18241 ttgataatta aaggtttgat taaagtatct gctataaaag aaattacaat tacagaataa
    18301 ataaaaataa caagagctga gttaagattg tttgaggcaa attcataaag acttacaggc
    18361 acataaatta aagctcctcc tatagcaggt atgagagaac ttacagcaaa aattactccc
    18421 attaaaattc catcataacc ataaaacatt gtgattaaac caaaaagtgc accttgaaat
    18481 attgctacaa ttaccataga gtaaagcaca acagccataa cattacccac ttcgcttaaa
    18541 acatcatcga gttctttttt atcaatggga atgatggatt taagatagat aacaagttct
    18601 gttccatata gatttgcaaa gaaataaaac acacaaatta aaaccatatc tataagaaat
    18661 ttagctcctg attttgtaaa acttgaagca taacttagaa tttgtttaga aatgctattt
    18721 aaatctatag aagctaaaaa ttctttgatt ttaggttcta aaaaattaaa gctttcaggc
    18781 aaagtaaatt gatagttttt gacataatca agtgtttgtg tgactaaatt aatatcaaaa
    18841 ttttttaaag ctttggcaag ttctatcata gcataaacaa aaggtgcaaa gaaaagcaaa
    18901 accatacaag ttgttgtaag aatggaagct aaaaatttat gccctttagt aagatttaaa
    18961 aatttcgcat tgatatttga ggtagctacc gccattaaac tagctatgat aattacaagt
    19021 aaaaaacctt taaaaaggta aagcaaaaga aataaaatga ctaaaataaa gcttataaga
    19081 aagaattttc cattttgcaa aatttactcc tcaaataaag ttttttcata gtttagtttt
    19141 aaagcactat agctttttgc actcgctata cgcccttttg cagtgcgttc tatatagcca
    19201 ttagctaata aataaggctc gattacatct tctatggtat tttcatcttc gcttaaagcc
    19261 gcagcaatac ttgcaagtcc gataggtttt tgcttagcag cggttaaaag ttcaagatat
    19321 cttaaatcca tcgcatcaaa accaagctca ttaactccta aagaatttaa ggcctcatta
    19381 gctctttttt ctgtgataat ctcttcatca ttaacatcag caaaatctct aactcttttt
    19441 aaaagcctta gagctattct aggagttgaa cgacttcttt tagcgatctc aagtgcggct
    19501 ttttcttcac aagttttatt aagttttaaa gctgcttttt gcaagattag ggcaagttcg
    19561 ctatctttgt aaaattctaa tctaaattgc ataccaaaac gatcacgtaa aggattgcta
    19621 agcatacctg cacgcgttgt agcccctata agagtaaatt ttggtaaatc gatttttata
    19681 gtttgagcag ctgggccact acctataatg atatcaaggc ggtaatcctc cattgcaggg
    19741 taaagcactt cttcgatagc agggcttaag cggtgaattt catcgataaa aagtatatct
    19801 ccttcgctaa gattggttaa aatggctgct aaatctccgc ttttttctat cataggagcg
    19861 gcggttgttt tgatatttgc acccatttca taggagatga tattagctag tgttgttttt
    19921 ccaagtcctg caggaccgct aaaaagtata tgatctaaac attcattgcg ttttttagct
    19981 gcagctataa agacatttaa atttttttta atgctttctt gacctatata accatcaaaa
    20041 tttgaaggac gcaacgaagt ttcgtaagtt tcatcaaagg agtatttttc tatttctact
    20101 attctatcca tatctttgct tatattttgg aaaaattaaa ataagatttt agctaaaatt
    20161 tgctagaatt tacattaaac tttaatgatt atggtttaaa aatgggaatt ttaacaaaat
    20221 tagaattaga ttatgaaatt gacgatatag aaaaattttt gcaatttttt agaaccatgt
    20281 gcgataggtt tgaaccttta atcatcaagc ttggaagcga tagtgtgcgt tataaagaag
    20341 ccataaaaga gcttgaaact ttagcacaca ataccgcttg ggcagcaaga cgcttaaatc
    20401 ttgaagaagt gactgatttt tgtgtatttt gtgaagagat gatggcgcaa gcaaatcgct
    20461 ttaatgggcc tgctagtgat gaatttacgg attggatgct tttgatgagt gatcagtttg
    20521 aaaaatattg tcgttcatat gaaaatgatg attctgtttt agcggttttt aatcctttaa
    20581 ttgttaatgt tccaaatatt atttctaaat aagggagcga cttggcttcg acaggagtaa
    20641 gtctgcttag atggcatgtc gctttgggca aagcgtaaaa agcccaaata aaattaaacg
    20701 caaacaacgt taaattcgct cctgcttacg caaaagctgc gtaagttcag ttgagcctga
    20761 aatttaagtc atactatcta gcttaatttt cggtcatttt tgatagtgta gccttgcgtt
    20821 tgacaagcgt tgaggtgaaa taaagtctta gccttgcttt tgagttttgg aagatgagcg
    20881 aagtagggtg aagtagtcat ctttgctaag catgtagagg tctttgtggg attatttttg
    20941 gacaggggtt cgattcccct cgcttccacc atcacgctaa ttttaagtaa atcataagtt
    21001 tatttcaaat ttttagaatt ttttatatga agttaagatc gatttattac ccttaaagct
    21061 ttgatatatt aggttttata atttt
//
LOCUS       DARBAC010000016        20613 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.016, whole genome shotgun sequence.
ACCESSION   DARBAC010000016 DARBAC010000000
VERSION     DARBAC010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20613
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.016"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            101..856
                     /locus_tag="SB799_000430"
     CDS             101..856
                     /locus_tag="SB799_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0867694.1"
                     /translation="MKKILSIALVALVGLFLGACSDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATD
                     ERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDK
                     NKQKDIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(880..1518)
                     /locus_tag="SB799_000431"
     CDS             complement(880..1518)
                     /locus_tag="SB799_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HEG0867695.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKLDMDEFMTFFLQSVKGKNEDRISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGVYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1515..2504)
                     /locus_tag="SB799_000432"
     CDS             complement(1515..2504)
                     /locus_tag="SB799_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867696.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENIAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVTKPDLLLLDEP
                     LSALDAKIRKHLRVQIKEIQKELELTTIFVTHDQEEALELSDRIILMNKGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDNLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2508..3287)
                     /locus_tag="SB799_000433"
     CDS             complement(2508..3287)
                     /locus_tag="SB799_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0867697.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAISNV
                     NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3288..4127)
                     /locus_tag="SB799_000434"
     CDS             complement(3288..4127)
                     /locus_tag="SB799_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEG0867698.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFILAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4124..4933)
                     /locus_tag="SB799_000435"
     CDS             complement(4124..4933)
                     /locus_tag="SB799_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEG0867699.1"
                     /translation="MMSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGSAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDVLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4930..6255)
                     /locus_tag="SB799_000436"
     CDS             complement(4930..6255)
                     /locus_tag="SB799_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEG0867700.1"
                     /translation="MKKVILTSAMLCSVLFGIQEHEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGADFDTESIQLINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPNL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVVENDNNFPYSSSREPNKSDDNEFILLEVKDFLKSK"
     gene            complement(6266..7312)
                     /locus_tag="SB799_000437"
     CDS             complement(6266..7312)
                     /locus_tag="SB799_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEG0867701.1"
                     /translation="MSKKFFLSLGLVVLLFSNSQAIDENLIKAVQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYGIEHSDTDMSSAQEIAKFKAEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALSGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7429..8412
                     /gene="corA"
                     /locus_tag="SB799_000438"
     CDS             7429..8412
                     /gene="corA"
                     /locus_tag="SB799_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HEG0867702.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8433..8975
                     /gene="mog"
                     /locus_tag="SB799_000439"
     CDS             8433..8975
                     /gene="mog"
                     /locus_tag="SB799_000439"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HEG0867703.1"
                     /translation="MDTINIGVLTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8972..9157)
                     /locus_tag="SB799_000440"
     CDS             complement(8972..9157)
                     /locus_tag="SB799_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HEG0867704.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLVRANKF"
     gene            9284..10471
                     /locus_tag="SB799_000441"
     CDS             9284..10471
                     /locus_tag="SB799_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEG0867705.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIINIAWIGFGFLYLKELLISSNTRFENTLFLLSFLIITS
                     ILNLPLSIYKSFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYALLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMKKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGAITMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFILANIFSFLISPMLNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10468..11283
                     /locus_tag="SB799_000442"
     CDS             10468..11283
                     /locus_tag="SB799_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEG0867706.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIQI
                     DHEPYFELIKRFKSGEPFEYIFEKVDFWGLEFKIKKGVLIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLHKVDHLIDFKL
                     CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQDYNRAFIAKFTNMRYDKK"
     gene            11296..11766
                     /locus_tag="SB799_000443"
     CDS             11296..11766
                     /locus_tag="SB799_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEG0867707.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFQIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQNLGENATKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11804..12553
                     /gene="flaC"
                     /locus_tag="SB799_000444"
     CDS             11804..12553
                     /gene="flaC"
                     /locus_tag="SB799_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HEG0867708.1"
                     /translation="MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATGGLSID
                     NQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12589..13221
                     /locus_tag="SB799_000445"
     CDS             12589..13221
                     /locus_tag="SB799_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEG0867709.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASTIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKESIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13234..16836)
                     /gene="dnaE"
                     /locus_tag="SB799_000446"
     CDS             complement(13234..16836)
                     /gene="dnaE"
                     /locus_tag="SB799_000446"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEG0867710.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDHSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNITLPEETKEFSFDNDDIVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGPEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            17055..17261
                     /locus_tag="SB799_000447"
                     /pseudo
     CDS             17055..17261
                     /locus_tag="SB799_000447"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
     gene            complement(17274..17603)
                     /locus_tag="SB799_000448"
     CDS             complement(17274..17603)
                     /locus_tag="SB799_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HEG0867711.1"
                     /translation="MKLYGIKNCNSVKKAMDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17600..18940)
                     /locus_tag="SB799_000449"
     CDS             complement(17600..18940)
                     /locus_tag="SB799_000449"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEG0867712.1"
                     /translation="MWTKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVVK
                     IGRIAGQFAKPRSSDFEELNGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAT
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLRGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARK"
     gene            complement(18964..19377)
                     /gene="uraH"
                     /locus_tag="SB799_000450"
     CDS             complement(18964..19377)
                     /gene="uraH"
                     /locus_tag="SB799_000450"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEG0867713.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
     gene            complement(19510..19866)
                     /gene="rplS"
                     /locus_tag="SB799_000451"
     CDS             complement(19510..19866)
                     /gene="rplS"
                     /locus_tag="SB799_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEG0867714.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKELKK"
     gene            complement(19877..20581)
                     /gene="trmD"
                     /locus_tag="SB799_000452"
     CDS             complement(19877..20581)
                     /gene="trmD"
                     /locus_tag="SB799_000452"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEG0867715.1"
                     /translation="MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKN
                     SYHKVDDYKIGGGAGLLMQAEPMYEVLRSIQEKKENPYFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLG
                     NMESLEEESFENNLLEAPAFSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCK
                     TKFFRPDLFLEHERKK"
BASE COUNT         7241 a         3489 c         2762 g         7121 t
ORIGIN      
        1 cacaacatta atataacttt tctaaaaatt gatccagact taattaaata taaatttaaa
       61 ataagtataa ttttaaaaca ttttatatca aaggaaaaaa atgaaaaaaa tattaagcat
      121 tgctctagtt gctttagttg gtttattttt aggtgcttgt agtgattcta aaaataaaga
      181 atcaaatgca agtgtagaat taaaggttgg aactgctcca aattataaac cttttaatta
      241 taaagaaaac tcaaaactta caggttttga tactgatttg gttgaagaga ttgccaaaaa
      301 aaatggtatt aaaattgttt gggttgaaac caatttcgat ggattgattc ctgctttaaa
      361 agctggcaaa atcgatatga ttgcctcagc tatgagcgca actgatgaaa gaagacaaag
      421 tgttgatttt acgaaacctt actatatgag taaaaatctt tatcttaagc taaaaaacaa
      481 cgactctctt caaacaaaga atgatttaga aggtaaaaaa ataggagttc aactaggaac
      541 tttacaagaa aatactgcaa aagctatcaa aaatgcacaa gtacaaagca ataaagattt
      601 aaacatagct gttttagcac taaaaaacaa caaaatcgat gctattgtag ctgatcaaga
      661 tactgctaaa ggttttttag ctgaaaatcc agaattggta agtttctacc aagaaacaga
      721 tggaggagaa ggctttagtt ttgcttttga taaaaataaa caaaaagata ttattgaaat
      781 atttaacaaa ggcatagatg aagcaaaaac tgatggattt tatgatactt taattaaaaa
      841 atatgaatta gaataagcgt gaattttcac gcttatagct taaaaagtta aaatttcata
      901 ttttctctct tttgcaattt ttaaaatttt ttcatcacca ttacatacaa aggctttgct
      961 aacagactct agtaaaggta aatcattgat agaatcacta aaaaaataag aatctttcat
     1021 ccatttttca taatctttac ccaaatactc tttaagtctt aaaaccttac cttctttaaa
     1081 gctataaacc ccgtaagctt ttccactaaa tttatcgccc acacgctcgc attttatggc
     1141 tatgctttct ctcactccca aaaaagaggc gatttttcta actaaaaatt cagccgtagc
     1201 tgaaattata atacaccttt gatcttgata tttgattata agttctttag ctttttcata
     1261 aggttttata taaattttta taaattcatc tactaaagat gaaattctat cttcattttt
     1321 acccttaaca ctttgaagaa aaaaagtcat aaattcatcc atatcaagct ttttttcttg
     1381 atattgtttt tgataaaaaa cgattttttc taaatattct tgaggtaaaa aacctttttc
     1441 aacacaaaat ttaagccaaa gtttagcact atcgccttgt attaaagtat catctaaatc
     1501 aaataaaaca agcttcattt taactctttt gctaaagaaa gattgaattt taaagcgatt
     1561 ttatcacctg cttcataagt actatgagtg ctaaaattta aagtatctac cttaaattca
     1621 atttcttgca ctctaaccct atagcgtatg atattgccta gtaatgattt ttctttgatc
     1681 ttagcctcta agccttcgtt agaaatttct atggtttcag gacgcaaggc tatatctttt
     1741 ttaaaatcgt gttttaaacc caagttatca agctctttag ggcttaaaat attgtaattt
     1801 cctataaagc tagccacaaa atgagattct ggtaaaagat aaagattgtt tgcgttggaa
     1861 ttttgtatga ttttaccctt attcattaaa ataatcctat cggataactc taaagcttct
     1921 tcttgatcgt gcgttacaaa aatagttgtg agttcaagtt ctttttgaat ttctttaatt
     1981 tgcaccctta aatgcttacg aattttagca tcaagtgccg ataaaggctc atcaagtaaa
     2041 agtaaatcag gtttagtcac caaagatctt gctaaagcca ctctttgcat ttgtccgcct
     2101 gaaagcttat gtggataagt tttagcgtat tcttcaagct cgacgagttt taacattttt
     2161 ttcactcttt tttctatgtc ctttttatcc atttttttga tctttaaacc aaaagctata
     2221 ttttcaaaaa cgttaagatt tggaaaaaga gcgtaatttt gaaaaaccat acctatattt
     2281 cttttttgag gacttaattt ggtaagatct ttatcattta aagaaatttt tcctccatta
     2341 atttggctaa gccctgctat acaccttaaa agagtggatt ttccacagcc acttgggccc
     2401 aaaagggtta taaactcacc ctttttagca ctaaaattaa tatcttcgaa aataatttta
     2461 tccccataag cttttttaaa atttttaatc tttaaataag ccatttttca ctccttaatc
     2521 aaactagcta taaaagttgt tataaaaatt aatacaaaat aaactattac caaagcacta
     2581 gaataatgcc cactttgatt tttgatatta taaagataaa cttgtaaagt ctcataagca
     2641 cttcctacaa gaatatttgc gtataaaaat tcacctatta aaaaagaaaa acttaaaaaa
     2701 actgccacca aaattccatt tcttaagtta ggcaagacaa gtttaaaaat cgctcccatt
     2761 aaagaacctc caagcatagc attagatgcg atgagttcat ttaaattgac attagatata
     2821 gcattatcta aagccctata tataaaaggc aaagctatag taaaataagt aaaaatgagt
     2881 atccaagctg tgcctcctat attgtcagca taaagttgca aaagccctac acagctaact
     2941 ataggaggta cagcaaaagg catgataata agtatattta caaaggcttt taattttaaa
     3001 aaataataat ttaacacaaa aaccaaaggg aaaacaagaa tcacagaaag caagatactg
     3061 ccgacacaaa caagcaaaga atgccaaaga gcaagtaaaa atctttcatc atgaaaaagt
     3121 tcctgatacc atttaagcgt aagatcatca ggcaaaacac ttacacccca agaagtggaa
     3181 atagaatata aaaaagtagc cattaaaggc aaagctaaaa ataaaaaaac caaaaacaaa
     3241 actgcataat gataaatttt agcttttaaa ctcaaatttt cattcattta aagcacctta
     3301 aaattatatt ttttagaaag gaaattggct ataaaggtaa caacaagcat gataatagtt
     3361 ataatgatgc ttaaagcact agccatataa ggatcaagat tgatatcgcc tgcgattaaa
     3421 gcagcgattc ttacaggagc gacattaaaa tttcccgaac ttaaagcata aatagtcgca
     3481 taagctccaa aagcattggc aaataaaatc acaaaaacac caaacaaagc aggagcgagc
     3541 aaaggcaaag ctatttttaa ccaatataaa aaattgcctc cacctaacat tttacaagca
     3601 tttaaatgtg aattttcaag acttttaaaa gctggaagca aaagcaagat tgccaaagga
     3661 atttgaaaat acacataaac aatatttact ccgaaattag cataaacact aacaaaaggc
     3721 tctatgccta aatttttcaa aaacacatta actacaccat tgcttccaag aactataatg
     3781 aaagcaaaag ctaaaggaac tcctgaaaaa ttacttatca tagtatttaa agaaaaaaga
     3841 aatttacata tttttgatgg agctaaaata aataaagaat agctcgccaa aagccctatt
     3901 aaaagtccaa aaatactaga aataaaactg atttgtaaag aatttataat gctttgtaga
     3961 tagaatttgg actcaaaaat atgtataaaa ttggctaaag aataaatttc atcctcttct
     4021 acataaaaag cattaaaaac aatccaaatc aaaggtgcta tcataaaaaa agtaaaaact
     4081 ataaaaaaag gtaaaatact taaaaaggct agaaattttt ctttcatttt ttggccttta
     4141 aaatttcatc attatatctc ttatcgtgtt taagtcctaa aatttcacag atactgccac
     4201 aaatttcatc ctgttttatc ttggcatttt catacgaaaa agcactacca aaagtgaaaa
     4261 aaggcactaa aatttcatct tcgcttaagc ctccatgact tttaccctct gtcataccat
     4321 gatcgcttgt gatgattaca ttaatacctt gttctaacca agtaggcaaa tactcagaaa
     4381 tcaaaacatc aacttttttg gttttattag catactcaat agagtgtgag ccaaatttat
     4441 gtcctgcatc atctatattc atagaatgta taagagtaaa atctaaatta tatttgtttc
     4501 ttaaatgctc cccatctgca aataaatgag aatctaaata atcatcttca taataaaaat
     4561 gtccataagg caaagttaaa ttttcatctt ctatatggcg atgtaaagaa ggaataaatt
     4621 cttttttatt ataaagctca aaaacccaat gataagccgc acttccagct tttaagcctt
     4681 gttctttgca aaggtcaaaa atgcttgttt gttttgaaaa actcaattta ttattaatta
     4741 tcccacttaa aacaggcttt acgcctgtta ataagcactc gtataaagga cgagacatac
     4801 taggaagttc gcattctaaa gaataaaatt tgcccaaatt ctctttgcaa agcgcattta
     4861 aatatcccat atttatacta gcgcttttac aatttaagcc atcaagcaca actaaaataa
     4921 ctttggacat catttactct ttaaaaaatc ttttacttca agtaaaataa attcattatc
     4981 atcactctta ttaggttctc tgcttgaaga ataaggaaag ttattgtcat tttctacaac
     5041 tatatgagag tcatctacta tatccacacc ttctatggtt tcaaaaggaa aaacaaattt
     5101 atcatttact aaaggctttt tagaaatttt atttctatcc ttaatattta aaagatctat
     5161 ataagaaatt ttttgagctt catgagtttt atcatctaat ttaaccttat aaattctttt
     5221 aaattgagct acattattaa aacaatgctt agtatcttca ccttctttgc aagccttatc
     5281 tttagtgcct tctttttgat ctctttctat gatgatgccg tatttatcat ctatcatatt
     5341 aaaatcacct atggaatggc ttttatcttc taagaaatat ttataagttt ttccggtgaa
     5401 ttttttattt tttacatcaa attctatgat tcttagatat tctttacctt tttcattctc
     5461 ataagcgttg ttattgtaaa tgcttccttc taaaagcaaa taaagtttag aaccatcttt
     5521 agagcttgcc atagcttcaa agcctttaga acgcttgata ttaaatttct cattttctcc
     5581 atcaggctta tcgctaaatt ttaaatttgg attatcagga gaaataagtt ttttaccctc
     5641 cacatacaca tcaaaaactt cttttaaatt cccattctta tcaaaatgaa gcaaataagg
     5701 accaaattca tcacctatat aaaattcatc attgataagc tgtatactct cagtatcaaa
     5761 atcagcccca cttaaatacc tttctttggt tgtttcggtg gttataggat aagggtattt
     5821 tttatcacta tctttaaaaa aaactgtttt taaaagttcg tattttgagt ttttaaaatc
     5881 aaatttaaac tcgtgagcat aaagcatagc atcataagaa ttatactttt tacccaagcc
     5941 attatcacta atcacccaaa aaacatcttt ttttggaata tattttatcc cactatgtcc
     6001 ttgtataggt tgatttttaa aaggtaaata aaaatctgtt tccctgtttc ccttagattt
     6061 aaaagttcca attttttctt ctctagtgat atttgcaaat ttcccataag ttttaaaaaa
     6121 atcaggagca tccttaggag gttttactgt acttttagaa tctatgataa tatgccctgc
     6181 taaattggcc tcatgctctt gaattccaaa taaaacactg caaagcatag cacttgttaa
     6241 aataaccttt ttcatccaat ctcctttatt tcatatccac tataactttt tcttgccaaa
     6301 gttgtggcaa ttctttagcg cttttttccc aagctttttg atctttgatt gctcttgcat
     6361 ttttgtattg ctcacttggt aaaagtttag cttttatatc atctggcaag gtaatatgat
     6421 caattcttat tggccttgca taaccttttg ctagattgat ttgtccttta tcagaaagta
     6481 taaactcacg agctaattta gccgcatttg gatgttttgc gtatttattg ataatagttg
     6541 tatagcccga aataacacta ccatcagcag ggattaaaac ttcataacga tctttgccca
     6601 ctttatctct atagcctaaa ccattaaaat cccaaactaa acccacttca acttcacctt
     6661 tttcaagatt agctatgctt acatcattat ttacaagtct tccttgtttg gctaaagtat
     6721 taaaaaaagc taaagcagga cttaaatctt tttcatcccc acttaaggca taattagctg
     6781 ccaaaactgc actcacagct tgagctgcta cacttacatc acccacggta attttataat
     6841 ttcccttaag caaatcttgc caagttttag gtatatcttt tactacatct ttattgacta
     6901 taaaagctat ggttcctgta taagctaaaa gccaatttcc atctttatct ttagcccaag
     6961 ttggaatttg atcccagtag cttgtcttaa aaggctgagc tactccttgt ttaaccgcta
     7021 tctctccaaa agaagctcct acatccccta tatcaccgct tgcatttttc ttttcggctt
     7081 taaatttagc aatttcttga gctgaactca tatctgtatc actatgttct atgccataaa
     7141 gatttttaag atctgcccaa gtatccttcc agtttgccca agtatcaggc atagctaaag
     7201 aatttaccct accttctgct tgcacagctt taatcaaatt ctcatcaata gcttgtgaat
     7261 ttgaaaacaa taagacaaca agacctaaac ttaagaaaaa tttcttactc atttttttcc
     7321 tttcaaaaaa tattttggaa atttaatgag ttttagaaac attttagaaa caagttaatt
     7381 tttaagcaaa caaggttata attttaaagt cataaacaag gagcgatcat gctttatatt
     7441 tatatcaaaa ctcaaaatgc tttagttcaa agaatcaatt ttaatctcga tagtcaagaa
     7501 ctaccacaaa atattttatg gattgattta cttcatccaa gtgcagcaga aattgctttt
     7561 atatcaagtg aatttaatct tgagtttcct acaaaagaag aaagggaaga aatagagctt
     7621 agcgcaaaat attgggaaga taatgcgaca ataaccatca atgctcattt tttagtaaga
     7681 gatcttaaaa gcgatgaaga agataggaat ttaatcaagc ttcgcacaga aattgttact
     7741 tttgctaccg ctaaaaatat cttatttact ataagatata acgaatttag cacttttgaa
     7801 gaaattcaag caaggatttt agctagtccg aagaattttg aagatggttt tgatattatt
     7861 gataaaatgt ttgaagtgcg tgttgaaaaa gatgcggatt tactagaatg gatagataaa
     7921 gaagcaagac gcttaagaac aagtgtttta gaaaaaaaag atgaatatag ttatgatgaa
     7981 atgctaaagg atatttcaag tttacaagag cttaatatgc gggtaagaga ttctttgttt
     8041 gataagcgtc gcgctatgac ttctttgcta aaaagcgata aaatcgataa agatataaaa
     8101 caaaatctca ctatagtttt aaaagactta aattctttag ttgaatttag tgtttcacaa
     8161 cttaatatct tagataatat ccaaaccatt ttagccagcc aaatcaacat agaacaaaac
     8221 aaaatcatta aaattttcac cgttgcaact gttgccatga tgccacctac tttaatagga
     8281 actgtttatg gtatgaattt taaattcatg cccgaacttg aacttcacta tgcttatccc
     8341 atagtgcttg gcgtgatggt aatttctatc attttacctt tggttgtttt caagaaaaaa
     8401 ggatggttat aaaaatttat taaggagaaa caatggatac aataaacata ggagttttga
     8461 ccctaagcga tagagcaagt agtggtatat acgaagataa agccactgct gaaattgaaa
     8521 gagtgttaaa ttcatatata aaaaatgata ttatttatca taaagaatta atccctgatg
     8581 attatgattt gatcattaaa aaattacttt atctagcaga tgaaaaaaaa tgcgatttga
     8641 ttgttacaag cggaggtaca ggtccagcac ttcgtgatgt aaccccagaa gccacggaag
     8701 ccgtgtgtga taaaatgatg ccaggttttg gagaacttat gcgcttagaa agtttaaaat
     8761 atgtcccaac agctatactt tcaagacaga gtgcaggaat tcgcaataaa tcttttatca
     8821 ttaatttacc aggaaatcct aaggctataa aagaatgcct agagcctgtt tttccagcta
     8881 taccttactg tatcgatttg atagaaggtg cttatataga agcaaatgat gaagttatta
     8941 aggtttttcg tcctaagaaa aaatgtcaaa attaaaattt attagcccta acaagtctgc
     9001 ttaattgtct agcaagtaga cttgctgaag cttcatcttt gcttatcttt tgtactttat
     9061 ttttaaactt acaaagcctg tcatctaaaa tcacatcatt gatcggaatt ttaggctttt
     9121 ctttttgctt ttgtgaaatc tttttcttaa aaaacattct ttaatccttt tttataaata
     9181 tacatcaact tagttgaaaa gaatattatt ttagatttta aactattaac tttatttcat
     9241 tattttaagc tagaattcga aaaaaaccaa tcaaggaaaa ataatgactt taattgcaat
     9301 tttatgtctt tacacagcgc ttttatcttg gatttcctat gctcaaattc gtttcttaga
     9361 aagagaaaaa gacaaacaag ctcaaatttt aagcgaaaaa gactatcaaa atgcagcaga
     9421 tattgccatc gaaaatgaaa aatttaaact attttccaat ttttataatt taatcatcaa
     9481 tattgcatgg ataggttttg gatttttata tcttaaagaa ttgcttatct caagcaacac
     9541 tcgttttgaa aatactttat ttttattatc ttttttaata atcacaagta ttttaaatct
     9601 acctttaagt atttataaaa gttttatcaa agataaagcc catggttttt caaatatgac
     9661 tgtaaaactt tttatcaaag atactatgaa aagtcttatt ttaactttaa tatttggatt
     9721 tttaatcctt tatgctttgc ttttttgcta tgattttttt ggaacttttt ggtggattgc
     9781 ggcctttatt tttgcctttt gtattatagt gattataaat ctcatctacc ctaccttgat
     9841 agcacctatt tttaataaaa tgaaaaaact agacgatgaa aatttattga aaaaaatcag
     9901 ctctttaatg aaacaatgcg ggtttagtgc aaatggggtt tatgttattg atgcaagcaa
     9961 aagagataag cgtttaaatg cttattttgg tggacttttt aaaagcaaaa gagtggtgct
    10021 ttttgataca ttattaaaag ccttaaatga aagagaactt ttagctgttt taggacatga
    10081 gcttggacat tttgttcata aggatattat caaagcttta tttaacggcg ctataactat
    10141 gtttttactt ttttttgttt ttgcaaattt acctgaattt gtttacttag aaagtcatct
    10201 agaaggagta aatggtggcg tgtttgctct tttatttatc ttggcaaata tttttagctt
    10261 tttaatctct cctatgctta atgccttaag tagaaaaaat gaatttgcag ctgatcaaca
    10321 cggagctaaa gttacaagca aagaagatat gaaaaatgca ttgatagctc tagcaagaga
    10381 aaataaagct tttatcaaaa caagtaaaat atatacattt ttttatctca gccatccaag
    10441 tattagtgat agaatcaagg ctctttcttg actataaaaa atgctcttat ggaagctaaa
    10501 tctagcttaa aaggttatga aaatgaagca gtatttatac tctgtgaata tctaaaaaaa
    10561 gataaagctt ggttattttt aaaccaagat atacaaatag atcatgaacc ttattttgag
    10621 cttataaagc gttttaaatc tggagaacct tttgaatata tatttgaaaa agtggatttt
    10681 tggggcttag aatttaagat aaaaaaaggc gttctaatcc ctcgctacga tagtgaaatt
    10741 ttactttttc aaattttaaa tttatgcaaa aaaaatactt ttaatgggat tttagaaata
    10801 ggatttggaa gcggaatttt aagcattgtt ttagccaaag aacttgggtt aaaaatcaca
    10861 gcctgtgata tcaatcccaa agccttagaa ttagctttag agaatgccaa attacacaaa
    10921 gtcgatcact tgattgactt taaactttgt aattttaagc aaattaaaga aaattatgat
    10981 tttatttttt caaatccacc ctatattaaa aattcatatc ctatagatat ttgggtgcaa
    11041 aaagaaccca aagaggcttt atttggtgga gaaaaaggat atgaaattct agaagaaatc
    11101 atacattttt cccttgataa aaaagttaaa tttttagctt gcgaatttgg ctatgatcaa
    11161 aaagaaattt tggaaaaaat tttatatcaa aataatttca ttgttgattt cttcaaagat
    11221 gaacaagatt ataatcgtgc ttttatagct aaatttacaa atatgcgcta tgataaaaaa
    11281 taaaaggaga aactcttgaa agctgttaat ttatttttac ttgcctccat cataggggtt
    11341 gaactcatac taggaatagt tgttgcacca acaatttttt ttcctcaaaa tcttatagga
    11401 gaaggagtgt tgagccattt tcaaagtggc ttaatgatga cgcaaatttt tattaagatg
    11461 ggatatttgc tgatttttgt ttcagtggtt aattttttat atgaaattta ttctcttata
    11521 aaagatgaaa tgaaatttca aataaaattt tcaaaattta tgctgagttt gcttattttg
    11581 attttaagct taatatttgt tttttatttt actaatacca taattgaact ccaaaactta
    11641 ggcgaaaacg ctacaaaaac tcaagaattt atcagtatcc ataatgcaag tgaagtggtg
    11701 attaaaatca tcttgataat gcaagttttt ttatatttct taagctttaa aatagcaaaa
    11761 aaatgataaa atataaataa atccgaaaga gaaggagtag gccatgatga tctctgatgc
    11821 aactatgatg caacaaaatt attatttaaa caatgcacaa aaagctagtg ataaagcttt
    11881 agaaaatatt gcagctgttc gcgcaataag tggagttgat agtgctaatt tagctattgc
    11941 tgattcttta agatctcaat caagcactat agatcaaggt gtcgcaaatg cttatgatgc
    12001 tataggggtt ttacaaattg cagatgctag ccttaccaat atctctcaaa gcgcagatag
    12061 acttaatgaa ctttcagtga aaatgaacaa tgctgcactt aatgattctc aaaaaggaat
    12121 gctaagaaca gaagcaacac gcatacaaga atccatcaat gattctttta ataatgcaac
    12181 ttataatgga aaaaatgtct ttcaaactat gaattttgta gtaggtagcg gaactgaaac
    12241 tacaaattta aatccattag caacaggtgg attaagcata gataatcaag atagtattac
    12301 aaattttatg gatcaacttg gaagtttaag aagtgaaata ggctcgggta tcaatgccat
    12361 cacatcaaat attaacgcaa gtgttcaaaa tagcatcaac tcaaaagcag ctgaaaataa
    12421 tttactaaat aatgatatgg caaaaaatgt taatgatttt aatgccaatt atctaaaaga
    12481 aaatgctgct gcttttgttg ctgcgcaatc caacatgcag cttcaaagca aaattgctaa
    12541 tttattgcaa taatataagc cctaaatagg gcttatttct ttatcaaaat gactttagag
    12601 caaattttag aaaaaaccaa aaacgttcgt cttgtagccg caagcaagta tgtcgatgca
    12661 agtacaattg aaaagctttt tgatcaaggt atagtagaat ttggagaaaa tcaagtccaa
    12721 gctctagcac aaaaaaaaga aaatcttgat gaaaaaaaac tagacataaa gtggcatttt
    12781 ataggaacgc tacaaagcaa caaaatcaat ctcttaatca aacaaaaacc tatattatgg
    12841 cactcttgta atggtattaa aatagctaaa gctatggaca aaagacttga ttataaatta
    12901 aatactttat tagaaatcaa tagtgcaaat gaaaatagca aaagcggtct agatccaaat
    12961 caagctgtag aagaatattt acaaatacaa gaagaatgct ctaatctaaa tctttgtggc
    13021 gtaatgagca taggatcaca cagccaagat aaagaaagta ttatcaaaag ctttgaaact
    13081 acatttaaaa tttatgaaat tcttcaaaaa catggggcta aaatttgctc tatggggatg
    13141 agtaatgatt ttgaaattgc tataaaatgc ggatccaact tagtaagact tggaagcatt
    13201 ttatttaaaa atcttaagta agaacaatct tacttaagca tatttattag aaatttcctc
    13261 tactatacta tcagagataa taaaatctgt atgataaagc aagcaagatc ccgcgctaat
    13321 aacttttaaa acaagttttt tattgttttt ttcattagga ttatgtgcat ttctagcaat
    13381 ttcatgaatt tcatagatta attctctatt taaccttgtc aaatctagct ctatgatatt
    13441 tttttcaaat tccttaggtt ctgcggtaaa atgattttct tctttatttt tgaaatcttt
    13501 ttttgctcca aattttttta tagctttaat ctcgccatct tcaagacttt gtaaatcttt
    13561 aattgctttt aaaaaaaagc taggcttctc ccctccctca gctttaaatc ccaatacaaa
    13621 accataggca ttatttttta aattttcatc tttgatgata ttttctattt cttctacatt
    13681 gctttcaaat acagtagcat caaacgaaga ataataatcc aaaatttcaa ttctaccata
    13741 acgcttatta tttttactca tcatggattt gaaatcttca attttaccta tacttaaaat
    13801 ttctccattg ttttttaaac tttcaaaatc taaactttta acataatcta tggcattaat
    13861 ttgttcataa aatcgatcta aaggatggcc tgaaacataa attcctaaaa tttctttttc
    13921 atatcctaat ttttccatca cttcaaattc ttcatttttg ggagtaaaat ttacttgaac
    13981 acctgaagtt aattcctctt caccaaaaag agaacttgca gcattttttc ttacttcagc
    14041 catcttacgc gatgcttcgc taagattttc catattatca aacaaagctt ttctcgtaaa
    14101 accaaactca tcaaaagccc ctgccttaat aagactttct aatgttctgc ggtttatctt
    14161 ggtaggatct atcttaccta agaaatcatt aatatcctta aattctccat cttgtcttgc
    14221 ttcaagtaaa ttttcaactg caggaatacc cacacttttt atagccccaa gtccgtatat
    14281 aatagcatcc ttgccatctt gctctaaagc actaaattca cggatcgctt tgttaatcga
    14341 tggaggtaaa agtttaatat tcattttttt catctcatca atataaacag caattttatc
    14401 cacattgttt tcttcgcttg ttaaaagcgc tgccataaat tcactaggat aataagtttt
    14461 taaataagct gtttgaaaag taatcaacgc ataagccgca gagtgagatt tattaaaacc
    14521 atatcctgca aattttacga taagctccca taaatcctca gcttttgctc tatcatatcc
    14581 ttgtttttct gctccatctg caaaatcagt tttaagcttt ttcatcttct caggatcttt
    14641 tttacccata gcacgacgca ctacatcagc acctcctaaa gaaaagccac ctataatttg
    14701 aacaatttgc ataacctgtt cttgataaac aataacccca taagtaggct ctaaaacctt
    14761 ttctaaactg tcaaaaggat attctatact ttttaaacca tgctttctgt cgataaaatc
    14821 atcaagcatt cctgattcca taggacctgg acgataaagc gcaagaaccg caatgatatc
    14881 ttcaaaacgc tctggtttta agcgtgcatt taaactttgc ataccgcctg attcgatttg
    14941 aaaaattccc aaagtatttc cactttgtat ggttttataa actttgctat catttacatc
    15001 tatagtttcc caaataatgt ctttattgta acgcttttta ataagcttga tcgcattatt
    15061 gattactgtt aaggttttaa gacctaaaaa gtcaaatttt atcaaatcca catcttctaa
    15121 atgatcttta gaatactgcg ttaccaaatg tctttcatca tttttacttt gtctaaaaag
    15181 cggagttttc ttccataaac tttcattaga aattacaaca cctgctgcgt gcatacccgc
    15241 attgcgattt aatccttcta aagctcttgc atactcccaa acttcaggac ctttaggatg
    15301 acgatcgata aattctttaa ttttaggttc tttttcataa gcagcatcaa gagtgatttt
    15361 aagctcttcg ggcacaagtt tagcaagctc atcagcatct tgaatactca tatcacaaac
    15421 tctagccaca tcacgaatca cccctttagc caaaagttta ccaaaggtaa tcacctgtgc
    15481 aactttatct gctccatatt tatcaatcac atagtcaatc acttcagcac gtctgtcttg
    15541 acaaaaatcc acatcaatat caggcatgct cacacgctca ggatttaaaa aacgctcaaa
    15601 aagtagacta taaggaatag gatctaaatc cgtaatcctt aaacaataag aaaccaaact
    15661 tcctgcagct gatcctcttc cagggcctac tggaatacct ttatctttag ccactttaat
    15721 aaaatcatga acaataagca tataacctga aaatttcata tttttaatga tgttaatttc
    15781 tacttcaagt ctttgtttgt attcttcatg cttgctttca tcgataaatt ttaatctctc
    15841 ttcaagtccc tttttacaaa gttcttcaaa aactatgtca tcattatcaa agctaaattc
    15901 ttttgtttct tcaggcaagg taatattatg atctttagca tattctcttg taaatttaaa
    15961 attcggtgga gtgggattgc caagattaag ctctaaatta catttttgcg cgatttcttg
    16021 tgtattttct atagcttctg gaatatctgc aaaaagctca ctcatttgct cagggctttt
    16081 aacataaaat tcatgcacac tatgacgcat tctatcagga tcattaagtt tttttcccat
    16141 agctatacac ataaaaacct catgggcagc cgctctttct ttgaaagtat aatgcgtatc
    16201 atttgtagca ataattttta tatttaattc tttagaaagt ctgataatat catcatctat
    16261 cattctttga tcgcctatac catgacgcat gatttcaaaa taaaaatcat ctttaaaaac
    16321 ttttttatac catagcgccg cttcttttgc tgcttcatag ccttttgcac caaaacgcac
    16381 atttctttca ctataagtat ttaagtgcca atttacttca ccttgcaagc aagcagaaga
    16441 acaaataaga ccttcgctat gatcttccaa aagcttttta ttgatacgcg gataataata
    16501 caaaccttta atataacttt gagaacttaa atacattaaa ttttgatatc cgatctcatt
    16561 ttttgcatac aaacaaaggt gaaaacgctg acgagaactt ttatcatcta attcatcgtg
    16621 attatgcaaa tacgcttcca taccaatgat aggttttaaa ccttgtgctt tcattgtttg
    16681 ataaaaatca attgccccaa acatatttcc atgatctgtc atagccacac ttgtagcacc
    16741 ctgctctttt aaagtcaaag ctaattcttt aagcttattg gctccatcaa gcaaagaata
    16801 ttctgtatgt aaatgtaagt gtgtaaattg actcattttc ttcctttagt tttttaaggc
    16861 ttattttaaa attataaatt tttctcgctg aatttgaaag aaattggtcc taaatttcaa
    16921 cttaaatttt acaaaaaggc aaaaattcag ccaaaataaa ctataataaa atctaagatt
    16981 ttaatcttaa taaaaagaac ttttcaaagg atgaaatgat gaaagtaaaa attgcttatt
    17041 gcaatctttg aaattatcgc ccacaagctg caagggttgc agaagaacta caaagcgatt
    17101 tcaaagatgt tgaagtagaa tttgaaattg gcggcagagg taattttatc gttgaagtag
    17161 acggaaaagt tatcttctct aaaacacaac ttattaattg cgaaagtgaa agatttccat
    17221 atcaaaatga aattaatcaa ttaataaaaa atagagtgta atcaaacact ctatcataac
    17281 attttctcat attccttacc aatatatatg ttttgctcat actcgataat aggacgctta
    17341 atacaacttg gattttctaa tacaattttt tcaagttctt tttcatttaa atttttaact
    17401 ttttctttgt ttaaaccaag ttttttagaa gttaatccag cagtattgat aagttcttca
    17461 aaagattttt gttttaacca tgtgtataaa atatcttgat taatcttttt aatatccata
    17521 aaatcaaaca caatgccttt ttgtgttaaa gcatccatag ctttttttac agaattgcaa
    17581 tttttaatac cataaagttt cattttctag ccttttttac caaatctgcg attaaaaaag
    17641 caagttctaa tgcttgatcc gcattaagtc ttggatcgca ttgagtctca taacgatctt
    17701 ccaagctttg agcagtaaca ttgcttgcac cacctgtgca ttctgttaca tctttcccag
    17761 tcatttcaag atgcacccca cctggataaa ctccttcgct tattgcaatc tcaaaaaaag
    17821 atctcacttc ttgcatgatt ttatcaaact cacgtgtttt aaaattacct gcttttactg
    17881 tatttccatg cataggatct atgctatata ctaaatttaa accttcactt ttaagtttag
    17941 agaaaatttt tggcaaatta ttgataattt tatctgcacc catgcggata ataatattta
    18001 atcttccttc ttcattattt ggatttaaaa catttgctaa agctatgata tcatcagcac
    18061 ttgcactagg tcctatttta acccctaaag gattttttac tcctcttaaa aaatgtacat
    18121 gagcttcatc aagtgccctt gttctttcac ctatccaaag catgtgagct gaacaatcgt
    18181 aaatttctcc acttaaacta tccactctag ttaaagcttc ttcataaggc aaaagtaaag
    18241 cttcatgtga agtataaaca ctaacttctc ttaggcttgg agtattactt gtattaatcc
    18301 cacaagcttc cataaaagct aaagcttgtg aaattttttc actgatatca gtatattgct
    18361 tatggagttc actctttttt aaaaaaccca aattccaacg atgtacttca tgcaaatctg
    18421 ctaaaccacc cttagcaaat ccacgtaaca aatttagcgt tgttgcactt tgataataag
    18481 cttcaagcat tctatgtgga tcaggaatgc gtgcttgttc gctaaattca aaaccattaa
    18541 taatatcacc acgataacta ggaagactta taccatttaa ctcttcaaaa tcactacttc
    18601 ttggcttagc aaactgccct gcaatacgac caatttttac aacaggacat ccaccggcaa
    18661 atgtaagcac tatagccatt tgaagtaaaa ttttaaacat atcacggata tttacagcgc
    18721 caaaattttc aaagctttca gcacaatctc caccttgaag taaaaaagct tcttttttgc
    18781 aaactcttgc taaagacttt tgaagatttc tcacttctcc agcaaaaacc aaaggaggaa
    18841 gcttctcaag tcttgctaaa actctattca tttcctcttg atctggatag ataggttgct
    18901 gttttatagg atagtttttc caagaattct tagtccacat ggttttttct ttcgttttat
    18961 ttatcagctt cctctataag ttgaataacc aaaaggagaa agggttattg gaacatgata
    19021 atgtttttga tctttagaaa gctcaaaact tacctctaca aaaggataaa aagtatttat
    19081 tttgtgtgat gtgtaatagt cttttgtgaa aaatttaagc ttataaattc caaaagccct
    19141 attttcagct ttttcatatg gtaataaatc tcctattcta ccattttctt cggtaaattc
    19201 ttcacttact tttttccact gttgatttgc ttccaactta taaagctcaa cttttacttt
    19261 aggagcaggt tgtccagaag taatatccaa gacatgagta cttaattgat attcagtagc
    19321 actcaaaaac attggcacgc ttgctagtat taataaagtt tttttaatag aaaacatttt
    19381 ctctccttgt ataatattta caaggaatat tatacaagag tattattaat aattaaaatc
    19441 aaataataaa aattataaat taattataat tatttaattg ttaggcttat aataaaaaat
    19501 aattataaat tattttttaa gctctttaat acgcgctgct ttaccgcgtc tatctcttaa
    19561 gtagaataat cttgcacggc gcacacgacc acgacgcaaa acagtaatac tttctaaact
    19621 ttcactataa atagggaaaa ttctctcaac gccaacatta ttagcgccca ttttacgcac
    19681 gataaaagtt tcacttacgc cattacctct tctagcaata caaataccct caaaattttg
    19741 gattcttgtt ttatcccctt ctttgatgcg aattgcaagc tttaaagtat caccagcacg
    19801 aaaatctgga acatttttac cttcaatttg ttttgcttca aattgttcta tatatttatt
    19861 tttcataaaa aatcccttat tttttgcgtt catgctctaa aaataaatct ggacgaaaaa
    19921 atttcgtttt gcaagacgcc aaagtagttt ttaaacttgc aattctagcg tgattaccct
    19981 ttaaaaactc tgaaggagta taaaattttt tatttttttt ctcaaaaata aaaggttttg
    20041 aaaaagcagg cgcttcgagt aaattatttt caaagctttc ttcttccaaa ctttccatat
    20101 ttcctaaaac cccgttaaca tttcttaaaa tcgcatcaca cattacaagc gcaggtaatt
    20161 ctcctcctgt taaaataaaa tcccctatgc taaaaacttc attcgcaaaa atttcaagca
    20221 ctctttcatc tataccttca tagcgcccgc atacaaaaac tatatgttct tttttactta
    20281 agcgtttggc gtctttttga ttaaaggttt taccacttgg atttaaaaaa ataaaatagg
    20341 gattttcttt tttttcttga atacttctta gcacctcata cataggttca gcttgcatca
    20401 aaagtccagc tccgccacct attttataat catcgacttt atgataggaa tttttagaaa
    20461 aatctcttgg attataaaaa ttaagtttga aaagtttttt ttcttttgct cttgcaagta
    20521 tagaatcttg aaagtaaaat tccataagat tagggaacaa agaaacgaag ctaaatttca
    20581 tgaattttct aaaattaaaa aagcatcttg cgt
//
LOCUS       DARBAC010000017        20227 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.017, whole genome shotgun sequence.
ACCESSION   DARBAC010000017 DARBAC010000000
VERSION     DARBAC010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20227
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.017"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            39..716
                     /locus_tag="SB799_000453"
     CDS             39..716
                     /locus_tag="SB799_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867716.1"
                     /translation="MENLSKKECLRIEIDKGLENSLKELEDLMEKLPEQQTQTLFEQC
                     TKNAMDAVTGHFGLASTILNAKDGGNVTTLHNFEKGIVATEEDLQKLTKYQQGYKRDS
                     NYDKIKDNIRDNSPKIVRSEYTGEEMERGAGKNKAQLDHVISLKEIDRDPNMHLFLDD
                     AIRAEIANHPDNLKWLDASANASKGDRDLMEWGKEIDPKTGKTNFEKYGIDEKKLKKF
                     TIQPNQT"
     gene            788..1654
                     /locus_tag="SB799_000454"
     CDS             788..1654
                     /locus_tag="SB799_000454"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867717.1"
                     /translation="MKIFVYSAFGVVLKDFIEAVVIELKTTFREFGKENIKEIFKRFA
                     RRMEKVWEKIKAKWKDIFKGSLEAGIQAFFSNLLVFIINTIFTTLKKIVQIIRAGFTS
                     LYQAVKIIINPPKNIPKDEIYFEASKIFVSGMISAISMLGSEMIHKFLLSIPGFNVFL
                     SLPIPFTDETIGDALSLCISAAGGAVLSTIAIFYMDKWRSNSKIGNLQIQIVTQKNLI
                     VQYKIAKTWFALNDAYHIVKNETLATIQQIKKDNQIREQSSQEVETAIEEFENCNITK
                     KLYKKLNQTKEN"
     gene            1654..1914
                     /locus_tag="SB799_000455"
     CDS             1654..1914
                     /locus_tag="SB799_000455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867718.1"
                     /translation="MLELITQKDQDFLQNIENLDEEYIQKFINKKISEIAIAIETAAE
                     NADKAKDRTQKAKNLNTDSDWQTYIPIFGRWLGETSEEKKRN"
     gene            1967..2437
                     /locus_tag="SB799_000456"
     CDS             1967..2437
                     /locus_tag="SB799_000456"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867719.1"
                     /translation="MTTILKEVVIFFTSSFCIATRMNQALSLIIAQGFVKSDGKVIRL
                     SKAAKEQFQQIQKFTLSFIEDHEKHKDTINNIQVELDKKNQIDDEQYKLIEKHYQEFI
                     QYKNYNDKIVQEQECKINELKDILNKRKNVFTNSISILALIVSVASIVLYFIGR"
     gene            2441..2904
                     /locus_tag="SB799_000457"
                     /pseudo
     CDS             2441..2904
                     /locus_tag="SB799_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004316478.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3226..4293
                     /locus_tag="SB799_000458"
     CDS             3226..4293
                     /locus_tag="SB799_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0867720.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNFLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISKNVDESLIPSYYKEKNLEVEDF
                     FIISDLRELVREDFSLLRDKFLANFITPNDHTYAIYGNNYTYPLPVRLKEECSYFLGD
                     EKHYLSVYKSKEYLVMQENFIRFVFGKRIFYLLHPDSISNIIHAELELLQSENDLLND
                     FTSIVVKYSKTLEYEIYAFAKKVLLKACMKDPSLYDLAYNVQGKSFILKDFFTQKPNL
                     GSIKFLLRHENIQCHLGKSLTQFINYPFSKSLTLIQEIRNEAVHAKAPSLNEVKKLRN
                     EILGIEGVSLLKSILTHKEIS"
     gene            4290..5162
                     /locus_tag="SB799_000459"
     CDS             4290..5162
                     /locus_tag="SB799_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEG0867721.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLTFMPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAKLYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLIFFYKEKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKFRTKNENFIPNEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNYQIIDEDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKTR
                     LENILKSYLNNLSK"
     gene            complement(5184..5259)
                     /locus_tag="SB799_000460"
     tRNA            complement(5184..5259)
                     /locus_tag="SB799_000460"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5224..5226),aa:Met,seq:cat)
     gene            complement(5294..5368)
                     /locus_tag="SB799_000461"
     tRNA            complement(5294..5368)
                     /locus_tag="SB799_000461"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5334..5336),aa:Gln,seq:ttg)
     gene            5461..6480
                     /locus_tag="SB799_000462"
     CDS             5461..6480
                     /locus_tag="SB799_000462"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HEG0867722.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            6492..6935
                     /locus_tag="SB799_000463"
     CDS             6492..6935
                     /locus_tag="SB799_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEG0867723.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            6953..8653
                     /locus_tag="SB799_000464"
     CDS             6953..8653
                     /locus_tag="SB799_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEG0867724.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHATDAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYPKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELVKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCE
                     GYEISNKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            8650..9114
                     /gene="ilvN"
                     /locus_tag="SB799_000465"
     CDS             8650..9114
                     /gene="ilvN"
                     /locus_tag="SB799_000465"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEG0867725.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            9111..10076
                     /gene="lpxD"
                     /locus_tag="SB799_000466"
     CDS             9111..10076
                     /gene="lpxD"
                     /locus_tag="SB799_000466"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEG0867726.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAIKFKEKSQD"
     gene            complement(10065..11093)
                     /gene="queA"
                     /locus_tag="SB799_000467"
     CDS             complement(10065..11093)
                     /gene="queA"
                     /locus_tag="SB799_000467"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEG0867727.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFH
                     TTFKNLQDFLPNCAIFFNDTKVIKARIYGNKVSGGKIELFLHQPFLNSHNPLFLAQIK
                     GRVKKDEILYFKKDLKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYARTKTKSG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(11086..11823)
                     /gene="tatC"
                     /locus_tag="SB799_000468"
     CDS             complement(11086..11823)
                     /gene="tatC"
                     /locus_tag="SB799_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEG0867728.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFALRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFALGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAILVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDKESDE"
     gene            complement(11824..12231)
                     /gene="tatB"
                     /locus_tag="SB799_000469"
     CDS             complement(11824..12231)
                     /gene="tatB"
                     /locus_tag="SB799_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HEG0867729.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDNTKNNLSGQNLNTEEKPNLSKLETQDKTEK"
     gene            complement(12290..13357)
                     /locus_tag="SB799_000470"
     CDS             complement(12290..13357)
                     /locus_tag="SB799_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HEG0867730.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLK
                     QFNIQSNQIKTLFIGGGTPSCVDAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKALITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKSQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKDKINILLKEKKLFYK
                     NKRYFNPNFLISDELALYLSS"
     gene            13457..13927
                     /locus_tag="SB799_000471"
     CDS             13457..13927
                     /locus_tag="SB799_000471"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEG0867731.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGATININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEEKGYI"
     gene            13929..15131
                     /locus_tag="SB799_000472"
     CDS             13929..15131
                     /locus_tag="SB799_000472"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEG0867732.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGYPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            15132..15668
                     /locus_tag="SB799_000473"
     CDS             15132..15668
                     /locus_tag="SB799_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HEG0867733.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKAARPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSAFDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSRVQLG"
     gene            15674..16273
                     /locus_tag="SB799_000474"
     CDS             15674..16273
                     /locus_tag="SB799_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEG0867734.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRILFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            16275..17417
                     /gene="folP"
                     /locus_tag="SB799_000475"
     CDS             16275..17417
                     /gene="folP"
                     /locus_tag="SB799_000475"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEG0867735.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNVLLMASKEQIQKLIVKEKLQDFGLK
                     NLALFLQKDFLKPKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYEAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASVIRVHDLYEHKQLFALAQAMDNIGV"
     gene            17418..19361
                     /gene="ligA"
                     /locus_tag="SB799_000476"
     CDS             17418..19361
                     /gene="ligA"
                     /locus_tag="SB799_000476"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEG0867736.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESEFRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGLGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCVNLDEVLKAYDELLALREKKPMMMDGMVV
                     RIDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKDRREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFSDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWHKQSFEAYANLEGFGEQMALSLCEFTRVNRTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRSRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LIKAKELEIKCIDESAFNELVKE"
     gene            19342..>20227
                     /locus_tag="SB799_000477"
     CDS             19342..>20227
                     /locus_tag="SB799_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867737.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRTVFSLFFLIPIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRISMGDFYLYIFSFFLAIFGLISLFLNFLNLEKID
                     FVFIFIILPLLMIFLKKELHLQFVDNAYNDFRIVVIASFFTALFYAFYGLFFTYNEIL
                     NLELFSRKIIAYKSASFVYFDFLSEFLHFISNLKFFIFSYFGYLGFRVLNFIFDFFNF
                     FMFCSLLAFVFNFVLKIKIKIIVLFLCFIMVLGSYFLKEQRNNALKSEQEQILLWMNN
                     FDFLKDNNLSLIQKEKDLF"
BASE COUNT         7370 a         2543 c         3628 g         6686 t
ORIGIN      
        1 tggatttaaa agccaattat gcggatttag aaaaagagtt ggaaaattta tctaaaaaag
       61 aatgtctaag aatagaaatt gataaaggtt tggaaaattc acttaaagaa cttgaagatt
      121 taatggaaaa attacccgaa cagcaaaccc aaacactttt tgaacaatgc actaaaaatg
      181 ctatggatgc tgtgacaggg cattttggac tcgcttcaac aatattaaat gcaaaagatg
      241 gtgggaatgt aacaacacta cataactttg aaaaaggtat tgtagcaaca gaagaagatt
      301 tacaaaagct tacaaaatat caacaaggct ataaacgaga ttcaaactat gataaaataa
      361 aagataatat aagagataat tctccaaaaa ttgtacgtag tgaatacaca ggtgaagaaa
      421 tggaaagggg tgctggaaag aataaagcgc aactagatca tgttatttct ttaaaggaaa
      481 ttgatagaga tcctaatatg catttatttt tagatgatgc aattagggca gaaatagcaa
      541 atcaccctga caatcttaag tggcttgatg caagtgctaa tgcttctaaa ggtgatagag
      601 atcttatgga gtggggtaaa gaaattgatc caaaaacagg aaaaaccaat tttgaaaaat
      661 atggaatcga tgaaaaaaag ctgaaaaaat ttacaataca gccaaatcaa acctaaaaaa
      721 gaaagttata aaagaaaaaa ttgtcaaata ttctaatgaa gttttaagta caggtgctaa
      781 agattcaatg aaaatctttg tttattctgc ctttggagtt gtcttaaaag attttattga
      841 agctgttgtt attgaattaa aaaccacctt tagagagttt ggaaaagaaa atattaaaga
      901 aatttttaaa cgatttgcac gcagaatgga aaaagtttgg gaaaagataa aggcaaaatg
      961 gaaggatata ttcaaaggtt ctttagaagc aggaattcaa gcattttttt ctaatttgtt
     1021 ggtttttatt attaacacta tttttacaac tttaaaaaaa atagtgcaaa tcatacgtgc
     1081 aggctttact tctctatatc aagctgtaaa aatcattatt aatccaccta aaaatatacc
     1141 aaaagatgaa atttactttg aagcatcgaa aatttttgtt agcgggatga tttctgcaat
     1201 ttcaatgtta ggaagtgaaa tgatccacaa gtttctgctg tcaatacctg gatttaatgt
     1261 atttttgtca ctacctatcc cttttaccga tgaaacaata ggggatgccc tttctttatg
     1321 tatttcagcg gctggtggtg ctgtattgag cactatagct attttttata tggataagtg
     1381 gagaagcaat tccaaaattg gcaatttaca aatacaaatt gtaactcaaa aaaatttgat
     1441 agtacaatac aaaattgcca aaacttggtt tgcattgaat gatgcttatc atattgtaaa
     1501 aaacgaaact ttagcaacta tacaacaaat caaaaaagat aaccaaataa gagagcaaag
     1561 ttctcaagaa gtagaaacag caattgaaga atttgaaaat tgtaatatca ctaaaaaatt
     1621 atacaaaaaa cttaatcaaa ctaaggagaa ctgatgctag aacttatcac acaaaaagat
     1681 caagattttt tgcaaaatat tgaaaacctt gatgaagaat atattcaaaa atttattaat
     1741 aaaaaaatca gtgaaatagc tatagctatt gaaacagcag cagagaatgc tgataaagca
     1801 aaagatagaa cacaaaaagc caaaaatctt aatacagata gtgattggca aacttatata
     1861 ccaatttttg gacgttggct tggagaaaca tcagaagaaa aaaaaagaaa ttaaatccaa
     1921 tatgatcctt gaagtagcag agttacagaa tgaatcaatg aatcaaatga caacaattct
     1981 aaaagaagtt gtaatatttt ttacttccag tttttgtatt gctacgcgta tgaatcaagc
     2041 tttatctctt attattgcgc aaggttttgt aaagagcgat ggcaaggtaa ttcgtttatc
     2101 taaagccgct aaagaacaat ttcaacaaat acaaaagttc acactgagtt ttatagaaga
     2161 tcatgaaaaa cacaaagata cgataaataa tatccaagta gaattagata aaaaaaatca
     2221 aattgatgat gaacaatata aactcataga aaaacattat caagaattta tacaatataa
     2281 aaattataat gacaaaattg ttcaagagca agaatgtaaa atcaatgaac tgaaagatat
     2341 tttaaataaa agaaaaaatg tttttacaaa tagcatttca attttagctt tgatagtttc
     2401 tgttgcgtcg attgtattat attttatagg gcgttaattt atgaattttt taagttcttt
     2461 aaaagataag gcggtaaatg cttcagaagc aattaaagac aaaactatta agactgctga
     2521 agttgttaaa gatattggaa tggaagtaaa atgtgggatt ggttggcacg cgggtgaata
     2581 tcaaaatgaa aaagataaac caaaatgttt ttttccaaaa tttgccctga ttgtggaaaa
     2641 tatcttacaa aaaatcaaca tgattttgaa gctcctgaaa tattaaatcc tgataattgt
     2701 tatggatata gacgatgtac tctttgttct attcaagtgt ttgataattt tcataattat
     2761 tatgaaatca aaaaagattc aaaatgcaga atgcacgaaa aatgtaattt atgcggacat
     2821 gaaagattag gacaaacaag acacaattgg aaatacgacg aaagcgggca aaaaatttgt
     2881 ctagattgca aagaaacagt ataaagacag atgttttcta aaattttctc atctcttagc
     2941 cttgcaaatg cgtttaaagg atttttattt aaacgcattt caagccctat gcaaagtgct
     3001 cgtattatta gtatggtttt ggatataaaa aatgctttta atgacagcaa agatcaagca
     3061 agtagtattt gcaaaacttt ggatttgata gtaaatttta aaaaagaaca tccgcaggat
     3121 tttaacgagt tgtttgaaat tttaaaagat ctcatacaag aatacgagca aaatcctaat
     3181 gaaatcaagc aaaatctcaa agaaatcctt aaaataaggc aaagcatgaa ccacctttta
     3241 atcctttata atccctatta tcaagaagat gtcatcaagc aacatttaag cattttacaa
     3301 gaaaaatccc aagttgcctt tggcaaaatc aaatcaaaac tcaacgatca agaaaagcaa
     3361 aatttcttag aagaaattta ccaaagtaca aatgaagaaa atttcttaca acttttttta
     3421 agcgattatg ctaatttatt tgtcgctaag gtggtaaaaa tttctaaaaa tgttgatgaa
     3481 agtttgattc ctagttatta taaagaaaaa aatttagaag tggaagactt ttttattatc
     3541 agtgatttaa gagaattggt cagggaagat tttagtcttt taagagataa atttttagcc
     3601 aatttcatca ccccaaacga tcacacctat gctatctatg gcaataatta cacctatcct
     3661 ttacctgtga gattaaaaga agagtgttct tattttttag gagatgaaaa gcattatcta
     3721 agtgtgtata aaagcaaaga atacctagtc atgcaagaaa atttcatacg ctttgttttt
     3781 ggcaaaagga ttttttatct cttgcaccct gatagcataa gcaatatcat tcatgcagaa
     3841 ttagagcttt tacaaagcga aaacgatctt ttaaatgatt ttacaagcat tgtagtcaaa
     3901 tactccaaaa ccttagaata tgaaatttac gcttttgcca aaaaagttct tttaaaagct
     3961 tgtatgaaag atcctagcct ttatgattta gcttataatg tccaaggtaa atcttttata
     4021 cttaaagatt tttttaccca aaaacccaat cttggaagta ttaaatttct actcagacat
     4081 gaaaatatcc aatgtcattt aggaaaaagt ttaactcaat ttatcaatta tcctttttca
     4141 aaaagtctta ctctcattca agaaatccgc aatgaagccg ttcatgcaaa agctccaagt
     4201 ttaaatgaag tcaaaaaact tagaaatgaa attttaggta tagaaggcgt aagtttgtta
     4261 aaaagcattt taacccacaa ggaaatttca tgaaagaata cgacaaatta agcatacgct
     4321 tggtgcagat tttatcaaaa tttaacaatg gggaaagtct aagcgcccaa gagcttgcac
     4381 aagagtttaa tgtcgataca agaaccatac aaagagatct taacgaaaga cttactttta
     4441 tgcctattaa aaaagaaaat ggaagatatg ttttagaaag ctttgctttg ggaaaattaa
     4501 gctttaaaga tatacaaaat ttcgccacct taagtggtat tgctaagctt tatccaaaac
     4561 tcgatcaagg ctttatagtt gatcttttaa gccatagggt aaataaagtt ttgatggtaa
     4621 aaaacgaagg ttttcaaaag gtggattatg agctttttaa agatcttagt gtagctatac
     4681 tcaaacacaa tgtattgatt tttttctaca aggaaaaaga acgccaaatc aaaccttaca
     4741 aactcgtaaa ttacaaagga atttggtatc ttttagggga tgaaaatgat aaattaaaac
     4801 attttaattt ggataaaatt tcaaaatttc gcactaaaaa tgaaaatttt attcccaatg
     4861 aaaaacttga ggaacaaatc caaaatgatc ctaatatctg gcttggagaa agtaaagaag
     4921 tgattttaaa acttgataaa aatgctaagg aatatttttt tagaaaagaa atactaagta
     4981 attatcaaat cattgatgaa gatgaaacaa gctatacttt aagcactcaa gtttcctatg
     5041 aagatgaaat tttgcatttg gttaagcagt ggattcctta tataaaaatt ctagccccta
     5101 tagaactgaa aacacggctg gaaaatattt taaaaagtta tttaaacaat ctatctaaat
     5161 aaaatttatt ttaaatccat aactggttgc gaaggggaga tttgaactcc cgaccttcgg
     5221 gttatgagcc cgacgagcta accactgctc tacttcgcgg catataagat actttgaaat
     5281 ataaaataag aagtggatgg ggtaaaggga ttcgaacccc tgaatgacag gaccaaaacc
     5341 tgttgcctta ccgcttggcg ataccccaat aaatattttt taaaagtgtg attataatga
     5401 attttaattt atttgtcaag caatttaagt tataatttta aaaattttaa ggaaataaaa
     5461 atgaaatttg ttagcgtaga acaagcgatt aaggatttac aagcaggaaa aatgcttgtt
     5521 atggtagatg cagaagatag agaaaatgaa ggcgatttaa tctttcctgc gcaatttagc
     5581 actcaagaaa aagtaaattt catgataaaa gaagctcgtg gtgtggtttg tgtagcctta
     5641 gatgaaactt tggcaaaaaa atttgaactt cctttaatgg tgcctaaaaa tacttcaaac
     5701 cacgaaactg cttttaccat aaccgtagat gcaaaagatg ctacaacagg agttagtgct
     5761 tatgaaagaa atatgactat acaaattttt gctgacgata atgctaaagc gagtgatttt
     5821 gtaagaccag ggcatatcaa tcctttaatc gcaaaaaaag gtggggtttt agaacgcaca
     5881 ggtcatacag aaggcacggt tgatctttgt aaattagcag gattaaaagg tgcatgtgtg
     5941 atttgtgaaa tcgtaaaaga taatggagat atggcaagaa gagaagatct agaaattttt
     6001 tgccaaaaac atgatctaaa catgatagcc gtaagcgatc ttatagaata tcgcctaaaa
     6061 catgaaagcc ttattaagct tgaagaaaaa agtcaaagtg ttttagcagg ctttaaagca
     6121 gaaaaattta tctttagcga tcataatcaa acccaacaca tagctttttg ctttaaagat
     6181 attaaaaaat gtgaaaatgt taaatttcat atcagtggta gtgattttga gcttttaact
     6241 tcagataaat tttcaaaact tttagagcaa atcaaatttc ttagtgaaaa tggtggcgtt
     6301 atagttttca tgcaaggaga aaaatccagt accactcaat acaaaaacta tggtatagga
     6361 gcacagattt taagatattt tggtatagaa gaaattaaac ttttatctca aagttgtgat
     6421 aaagactata taggcttaga aggttttggt ttaaacctta aagcttgtaa ttttaactaa
     6481 aaaggaaaaa aatgacttta aaagaacaaa ttttaaacga tatcaaagag gcaatgaaac
     6541 aaaaagatga ttttaaaaga gatagtttaa gaactctaaa tgcagctttt aagcaaatag
     6601 aagtggatga aagaatagaa ttagataatg aaagaattta taaaatcatt gcaagtgaaa
     6661 tcaaaaaacg caaagacgca atcgaacttt atcttaaggc aaatcgtgaa gatttagcac
     6721 aaaaagaaca aaatgaaata agtctttttg aaatttattt gcctaaacaa ctaagtgatg
     6781 aggagttaac tttagcctta aaacaactta tagaagaatt gggtgtaagt tcactaaaag
     6841 aacaaggttt ggtaatgaaa gaagctaaaa taaaattagg tgcgagtgtt gatggcaaaa
     6901 gacttaattt agcacttaaa gagcttttac aataattttt tggagtgtta ttatgaaaga
     6961 gttaagcggt tcagcaatga tttgcgaggc tttaaaagaa gaaaatgtta aaattgtttt
     7021 tggttatcct ggaggcgctg cgcttaatat ttatgatgaa atttacaatc aaaagtactt
     7081 taaacatatt ttagtgcgtc atgaacaagc agctttgcat gctactgatg cttatgcaag
     7141 aatgagtgga gaagtgggcg tagctatagt tacaagcgga ccaggtttta caaatactat
     7201 tacaggtcta gctacggctt atagtgattc tatccctttg gtgttgattt cagggcaggt
     7261 ggcaaattct cttattggta cagatgcttt tcaagaaatt gatgcagtag gcatttcaag
     7321 accttgcgtg aagcataatt atttagttac ttgcatagaa gagtttccac gcattttaaa
     7381 agaggctttt tatatagcaa gaagtggtag acctgggcct gtgcatatag atgtgccaaa
     7441 agatgtaagt gcaactttgg gactttggga atatcctaaa gaaatttcta tgaaaactta
     7501 taagcccgtt tataagggta actcaaagca aattaaaaaa tttgcagagc ttttaaaaga
     7561 agcaaaaaga cctttgtttt acttgggtgg aggatgtatc agttctaatg caagtgagca
     7621 aatcagagag cttgtaaaat ttacaaaaat tccagcagtt gaaaccttga tggcgcttgg
     7681 aactttaaga agtgatgatg tttttaatct taaaatggca ggcatgcatg gaagctatgc
     7741 tgctaatatg gctttaagtg agtgtgattt gcttgtgagt gtaggagcga gatttgatga
     7801 taggattaca ggaaaaacaa gtgaatttgc taaacatgcg actatagttc atgttgatat
     7861 tgatcctagt tctatttcaa agattatcaa tgcgcattat cctatagtag gagatattaa
     7921 agaagttctt aaagagcttt tagaagagct taaaaaggaa aatttcaaca caacttttaa
     7981 agaatggcac gaaactttaa agcgttataa tgaactttat ccgctttctt atgaagatag
     8041 caatgagatt ttaaaaccgc aatgggtgat tgaagaatgt gcgaaaatgg ctccagatgc
     8101 aaggattatt actgatgtgg gtcagcatca aatgtgggtg gcgcagtttt atccttttaa
     8161 ttatccaaga caacttgcaa caagtggagg gcaaggaact atgggatatt ctttacctgc
     8221 ggctttgggt gcaaaacttg ctgtgggtga agaagtggtg attaatttcg taggtgatgg
     8281 atcggttttg atgaatatcc aagagcttat gactgcctat gagtatggta taaaaactat
     8341 aaatattatt ttaaataatg cctttttagg tatggtaaga caatggcaaa gtatgtttta
     8401 taaagagcat ttttcacaaa ctgatttaag cactcagcct gattttatca aaatagctca
     8461 aggttttggt tgtgaaggtt atgaaatttc aaacaaagaa gaattcattc aagcttttag
     8521 ccaagcttta aaaagtgata aaacctctct tttaaatgta aaaattgatc gctttgaaga
     8581 tgttttacct atggtgcctg caggaggtgc gatttataat atgattttac caaaggcaaa
     8641 ggatagacaa tgagaagggt tttatcggta attgttttaa atgagcatgg ggttttatct
     8701 cgtatagtag gacttttttc aggaagaggt tataatattg actcgcttac agtagcacct
     8761 ttggaaaata aagaattttc tcgtattaat atagtcactt caggaaatga aagaactttt
     8821 gagcagatag tcaaacaact tcataagctt attcctactt ataaagtgat agaaagcgaa
     8881 gaatttattg acaaagaaat ggctttggtg aaaattcctt taaatgaaaa tttaggtgga
     8941 cttgatgccg ttttgaaagc ttataatggt actattgcaa atagcaatga gaattttttg
     9001 tttttaatgg ttgctgatga tgcaaatcga attgataatt ttttaaaaac aattaaaaaa
     9061 tacaatccta gtgatatagt tcgcagtgga tctgttttga tggagattaa atgaaattaa
     9121 gtgaaatagc agaattttta agcttggaat ataaaggcga ggatatagaa atcagtgctt
     9181 taaattcttt attgaaagca aattttacag agcttactta ttgtgatggt gagaaaaata
     9241 ccaaagatat acctcacaca ggagctgctg ctattttagt atctaaagaa tatgaaaatt
     9301 tagtacctaa agatactaaa gctttgatta ctcaaagtcc acatttgagt tttgcttttt
     9361 taagcaagct ttttgctaaa cctttgataa gcacagctaa agaaaaagta caaaatatcg
     9421 caaaaagcgc aagaatcatg cctaatgttt atataggcga taatgtaaat atcggtgaaa
     9481 atgtaattat tatggcagga gcttatatag gcgataatgt cagcattggt gatgagagta
     9541 ttatccatcc taatgtagtg atttataatg acactaaaat cggtaaaaaa tgtcatttgc
     9601 ttgccaattg tgtaatagga agtgacggtt ttggttatgc gcacaataaa aacggcgaac
     9661 attataaaat ttatcataat ggtaatgtgg ttttagaaga ttttgtagaa gtgggggctt
     9721 gtacaactat agatagagca gtttttgata gtactattat caaagcaggt actaaggtag
     9781 acaatctagt tcaaatcgga cataattgca atataggtca aaattgcatc attgtggcgc
     9841 aaactggaat ttcaggttca agtgagttag gacgcaatgt tattatgggt ggtcaaagtg
     9901 caacgagtgg acatttaaaa ataggcgatt ttagcactat agctgcaaga ggtggtgtga
     9961 gtaaaaattt agaaggcggg cgtgtttatg gaggttttcc tatcatgctt caaaaagatt
    10021 ggctaaaact tcaagctaaa atagcaataa aatttaaaga aaaatcacaa gattaacatc
    10081 gcatcgccat aagagtaaaa gcgatatttt tcttttatgg cgagttcata aagttttaaa
    10141 cactgttctc taccgataaa agctgaaact agcatgataa gagtagattt tggtaaatga
    10201 aaattggtta aaagatgatt ttgtcttata ggtggatttt gcgggtgtaa aaaaagatcg
    10261 caaaaaccgc tttttgtttt agttcttgca taatattcta tggttcttgt taccgttgtt
    10321 cctacgccta aaatagcttg tttagaatct ataatttcac atgcttgctg cggaatatta
    10381 aaaaattcac tatgcatttt atgctcttgt atattttcgc attccacgct tttaaaggtt
    10441 ccagctccta catgcaaggt taaatgataa atttcgtgtt tttttcttaa attttcaagc
    10501 atagtctcac taaaatgtaa acttgcagtc ggagcagcca ctgcgcctaa attttttgca
    10561 aagatacttt gataatcttt taaatcgctt ttttcatcct cccttttaat ataaggaggc
    10621 aagggtatat gtcctatctt gtcaagcagg ttgtaaagat ttgaggtgtc taaggtttta
    10681 tcattttgaa aaaattgaac ttttcgaaga ccatcattta aaagttctac aacgcgtatt
    10741 tttaaatcct ttttaaaata taagatttca tcttttttaa cacgcccttt aatttgagct
    10801 agaaaaagtg gattgtgaga atttaaaaaa ggctgatgca agaaaagctc tatttttcct
    10861 ccgcttactt tattgccata aattcttgct ttaataactt tggtatcatt gaaaaaaatc
    10921 gcgcagttgg gtaaaaagtc ttgtaaattt ttaaaagtag tatgaaaaat ttctttgttt
    10981 ttgcgatcaa aaaccaaaag cctagcatct tcttttggat ttgtaggata gttggctatg
    11041 agttcattag ctagagtgta atcatagctt gaaagaagta agtctttatt catcactttc
    11101 tttatctttt ggagcaggat ttaccttttg aacaattaaa atagaaagtc cataaagtcc
    11161 gcaaagtggt cctgccatta aaaattgaga taaaacatca ggtggagtca taaaggctga
    11221 aaaaacaaaa ataactaaaa tagctatgcg aaaatggcgt tttaaaaaac tatcatctat
    11281 aagtccaatt ttagcaaaga aaaaggcaat tacaggcatt tcaaaagcta agccaaaagc
    11341 cacaacaact ttggtaaaaa aatctacata agttcctatg gtaatcacag gattaaaatc
    11401 ttcatttaaa ccaaaattaa tcaaaaattt aaaagccaaa ggcactacaa caaaatagca
    11461 aaaacaagcc cccaaggcaa acataatgct tgcaaagcta acaaaaggca ccacaaggcg
    11521 tttttcatta tcataaagtc ctggagctac aaatttccaa aattgccaaa aaattacagg
    11581 tagagaaaag ataaaggctg caaaaaaact aaccttcatt gcggtaaata aggcttcttg
    11641 tacttcaatt acattcacat gtttggctac ttcgggtaaa acagctataa gtggagcttt
    11701 tagaatatct aagatatagc ttcgtagagc aaaacataca ataaacataa ctacaatgca
    11761 agcaacgctt ataaaaaggc gttttctaag ttctattaaa tgaggtctta attcttcaaa
    11821 catttatttt tccgttttat cttgtgtttc taatttgcta agatttggtt tttcttctgt
    11881 atttaaattt tgtccgctaa ggttattttt tgtgttatca tctctgctat caaaggttaa
    11941 atctaccttt gttttatcta aaatatctct tttaaggtca tcaaattctt caaaactgag
    12001 ttttttgcgt atattttcat tagtgcttga aaattcatct ttgtatttct tagcttcttc
    12061 ttttaagtca ttgatgcgta tttctttttc tatgcttgat tttgcatcat ctatgttgcg
    12121 ttttacagcc tttagaattt ttgctatttg tactatagct tctggaagtt tatcaggccc
    12181 taagactaaa atcgctacaa ctaaaataac tataatttca ccaaaactca ttaatcgtta
    12241 ctctttaatt tgatatttta aataaatatt ttacttaaaa aacttaaatt taagatgaga
    12301 gatataaagc aagttcatcg ctaatgagaa aattaggatt aaaatatctt ttatttttgt
    12361 aaaaaagttt tttttctttt aataatatat ttattttgtc tttttgccat tgattgagtt
    12421 ttgtttcatc aatccctact atacttctaa gtcctaaaaa taggtgttct aaattcaagt
    12481 ctttagagct tagttgctct atagatctaa aagtaggatt ttctatgtaa ttttttaaat
    12541 tttttgctgt ataaaaacgc ttattttcat aaaatcctac tgcacttaat ccacaagcta
    12601 ggtagttttt tccttgccaa taagcaagat tatgcttgca aatttgagat ttagtttttg
    12661 aaaaattact gatttcatat tgaaaaaagt caagctctag aagttgtttg ataaaaaatt
    12721 tcattaaatt aggagcattt tttttgaaat gttctttttt ggcaaaggct gtgtttgatt
    12781 ctatggttaa attataagca ctaaggtgtg tgattaaagc cttgatttgt tttaagtgta
    12841 agagttcaaa ttcaagcatt tttttattgt ctaattttgt atcataaata agatctaaat
    12901 tgatattttt aaaacctact ttatttgcat tttctaatgc tttgataatc atttcttgat
    12961 tgtgaattct tccaagaaag tgaagttttt taggatgaaa actttgagct ccaaaagaaa
    13021 tgcgattaac tcctagattt ttcatatttt taagccaatt taatgttgct gagttgggat
    13081 tggcttcgca tgaaatttct acatttttat ctagtaaggg atataaaatt ttaaaaatat
    13141 cttcataatt atacgcatcg acacaacttg gtgttcctcc gcctataaat aaggttttaa
    13201 tttgatttga ttgaatgtta aattgtttta attgaaaaac aatatcttct tttaaagcct
    13261 taaaataggc tttttcataa tcattttttt tcaaacttgt aaaagcgcaa taattacatt
    13321 tgctttcaca aaatggaata tgaatataaa aatgcataaa aaccctaaaa tattttatta
    13381 aatttttaat gtattttaat aaaaatttga tttgatttag gttaaaatta tatccttgaa
    13441 attaaggaaa aatattgtgg aaaacgagaa aaattataga ccaaatgttg cagctattgt
    13501 tttatcaagt tcttatcctt ttgagtgtaa gatttttata gctaaaagaa gtgatatgga
    13561 taatatttgg caatttccac aaggaggtat tgataaaggt gaaagtgtca aaaacgcttt
    13621 atttagagaa ctaaaagaag aaataggtac tgatgaggtt gaaatcattg ctgagtatcc
    13681 agaatggttg agttatgatt ttccgagtaa aattgttaaa aaaatgtatc cttatgatgg
    13741 gcagattcaa aaatattttt tagtgcgttt aaagcacggt gctacaatca atatcaatac
    13801 caaacatcct gaatttgatg attatcaatt tgtgagtgtt aaacaaattt ttgaaatgat
    13861 taatcatttc aaaaaaaata tttatgttaa agtgatcaaa tattttgaag agaaaggtta
    13921 tatctaaaat gcttatagtt caaaaatatg gtggaacaag cgttggaaca cttgagcgta
    13981 ttgaagcagt agccaatagg gttatccaaa gtgcgcaaca gggtaatcaa cttgttgttg
    14041 tagtatctgc aatgagtggg gtgacaaata ctcttattga gcaagctgaa tattttagta
    14101 aaactcctaa tggtaaagat atggatatgc ttttaagcag tggagagcgt gtaacaagtg
    14161 ctttactttc tattgcttta aatgaaaagg gttatcctgc tatatcattt tctgggagaa
    14221 aagcgggaat tattacagat agtgttttta caaaggcaag aattcatcat attgatacaa
    14281 aagcgataaa atcagaactt caaaatggta aaatagtcgt tatagcaggt tttcaaggtg
    14341 tagatgagga aggtaatgta actaccttag ggcgtggtgg aagcgactta agtgctgtgg
    14401 cggtagcagg tgccttaaat gcggatttgt gtgaaattta taccgatgtt gatggggttt
    14461 atacaacaga tccaagaatt gaaccaaagg caaagaaatt ggataaaatt tcttatgaag
    14521 aaatgcttga acttgcaagt ttgggtgcaa aagttttgca aaatcgctct gtagagcttg
    14581 caaaaaaatt aaatgttaac ttagtaacta gaagtagttt taacaataac gaaggaacaa
    14641 tgataacaaa ggaagatgga atggaacaag ctttagtaag tggtattgct ttggataaaa
    14701 atcaagcaag agtaacttta agaaatgtag aagataagcc tggaatcgca gctgaaattt
    14761 tttctgtttt agcaaatgaa aatattaatg tagatatgat tatacaaaat gttggagttg
    14821 atggcgctac aaatttgggt tttacggttc ctcagaatga acttgaatta gctaaaaatg
    14881 ctatgcaaaa aattttaagc tcaaaaacaa ctatagaaag tgatagtgct gtagtaaaag
    14941 tttctatagt cggcgtaggc atgaaatcac attcaggagt ggcaagtaaa gcttttaaag
    15001 ctttagctga tgaggggatt aatatcggta tgatttctac tagtgaaata aaaatttcaa
    15061 tgatagttca tgaaaaatac ggagaacttg cagttagagc actacatgag tgctacggac
    15121 ttgataaata aatgagtgat tttttaagtt ttactcttga aaatattcgc aatggcggag
    15181 cttttatggc atggttggag tcgcgtcgtt tagaatgggc tcctttgatg gctgcaagac
    15241 ttaaatatct tttagaggga cgcacttttg tcttaatgtg cgatgaacaa agatcttggt
    15301 atgaagagta ttttttaaaa aatataaatt caaaagccgc tcgtcccatg cttccttttg
    15361 tgtcgttaaa ttctttatgc aagaagaaag tacaaagttc agaagatata gctttactta
    15421 atgacttgct tgacatttct tttcctaatg gttatgtgta tttttatata ggaagtgctt
    15481 ttgataataa atctttaatc gctaaatcaa gagatgatag tttattgtgg ctttttgatg
    15541 agcagttaca agatagtttt tatttaaatt ctaaagataa agacttggat atcaagctta
    15601 ttagtttata tcaacttttt gatgtaagtt tggatgcaat attattttcc agggtgcaat
    15661 taggataaat attttgttta ttagtaagat tattatcagt gaagattttt taggtattaa
    15721 agaagaaatg attaataatt ttggtattaa aaaattaaga ttttttatgc cacaaaatga
    15781 atttttactt gatgatgcaa gagcagttga aaaagaaagc tatatcgcag aaaccgaaga
    15841 aaaaattatt gttttaatgg cggattctta taggatagaa gcacaaaatt ttttacttaa
    15901 acttcttgaa gaacctccaa aaaatattaa atttcttatt gtgatacctt ctaaaaattt
    15961 acttttacct actataaaat cacgtcttat ttgtgaaaaa agaaaagttg aaaaggaagt
    16021 taaaaaactt gatttagatc ttaaaagaat ggatttaaga atactttttg attttttgca
    16081 aaaaaatgaa aatttggata aaaatgaact tatggatcaa atcgcattgc ttgctaaaga
    16141 atgtgtgaaa tataaagatt ttaatgctga agaattagag tttttttatg aaagttatga
    16201 gcttgcaaaa ttaaattcta aaagcggggt gcttttagct actcttttgc taaattacta
    16261 tacaaagaaa taaaatgaaa ttttttaaaa tcaatccaaa caccgatttt aatttgcttt
    16321 gttctttcat aaaccctcat aaaatgggac aaaagattat gagtgaaaaa acaaaaattc
    16381 attttatttt tatcaaagat atttctactc ctgcggcaaa tattttaaaa caagatgctt
    16441 taagagtagg agctgaactt attactcata aagaagtaat tactgcaaaa atcactcatt
    16501 caaatgtgct tttaatggca agtaaagagc aaattcaaaa gcttattgtc aaagaaaaac
    16561 ttcaagattt tggacttaaa aatttggctc tttttttgca aaaagatttt ttaaaaccga
    16621 aaaaagccga gcttatggca gtgattaatg ttaatgaaga cagttttaat gcaaaaagtc
    16681 gtgtgagtga agaagacttt gaaaaaagac ttaatgactt tcttgcttta aagcctgaat
    16741 atatcgatat aggtgcggtt agttcaagac ctgggagtga gtattgtggt aaggaagagg
    16801 aatttaaaag actgaaaaaa gtacttgact taatttatga gaaaaattat tacgaacaag
    16861 caatttttag tttagatagt tttgatgaat attgtctaga atatgcttta aataagggtt
    16921 ttaaactcat taatgatatt acaagtttaa gaaatcttaa tctagccaaa cttgcaagta
    16981 agtatgaggc aaaatattgc ttaatgcaca tgcaaaacaa tccaaataac atgcaagata
    17041 atccttttta tgaagatttg cttgatgaga tgactttgtt ttttaaagaa aaacttgagc
    17101 ttttagaaag ttttggagta aaagaaagta ttttagatgt aggtattggt tttggaaaga
    17161 gtgcgggcca taatatgatt ttaatcaaac acttagaaca ttttttacaa tttaataagc
    17221 ctttgcttat aggtgcgagt cgcaaaagtg tgattaatgc gtattttcaa agcgagatta
    17281 aagatcgttt agcaggaact ttgtatttgc atttaaaggc ttttgaaaat ggtgctagtg
    17341 ttataagagt gcatgattta tatgagcaca aacaactttt tgctttagca caggcaatgg
    17401 ataatatagg agtttagatg aaaaaagaag agtatttaga aaaagttgct ttagcaaatt
    17461 tgtggatgag ggcatattat gaaaaagatg aacccttggc tagcgatgaa gaatacgatg
    17521 ctttaatcag agaattaaga gcttttgaag aacaaaataa agatgaaatt tcaaaagact
    17581 ctccaacgca aaaaatagct cctactatac aaagcgagtt taaaaaaata gctcatttaa
    17641 agcgtatgtg gtcgatggaa gatgtgtttg atgagagtga gtttagggct tgggcaaaac
    17701 gcgcaaaatg tgaaaaaaac ttttttatag agcctaaatt tgatggagcg agtttaaatt
    17761 tgctttatga aaatggtaaa ttagtaagcg gtgccactag gggcgatggc gaagtgggtg
    17821 aggatataac gcttaatgtt tttgagatag aaaatatacc taaaaatata gcctataaag
    17881 aaaggataga aattcgtgga gaagtggtga ttttaaaaga tgattttgag aaaatcaacg
    17941 aaaaaagagc ccttttaaat caaagtttat ttgccaatcc acgcaatgct gcaagtggga
    18001 gtttaaggca gcttgataca agcatcacca aagaaaggaa tttgaaattt tatccttggg
    18061 gactagggga aaatacctta aattttacta aacacagtga ggtgatgcaa tttatcagag
    18121 agctcggttt tttaaaagat gattttgtaa gactttgtgt taatttagac gaggttttaa
    18181 aagcttatga tgagctttta gctttaagag aaaaaaagcc tatgatgatg gatggtatgg
    18241 tggtaagaat tgatgatctt gcactttgtg aagaattagg ctatacggta aaatttccaa
    18301 aatttatggc agcttttaaa tttcctgcac ttgaaaaaac cacgcgttta ataggcgtaa
    18361 atttacaagt gggaagaagt ggagtgatca ctcctgtggc ggttttagaa cctgtaaatt
    18421 tagatggggt tgtagtaaaa tcagccacac tccataattt tgatgagatt gcaagacttg
    18481 atgttaaaat caatgatttt gtaagcgtga taagaagtgg cgatgttatc cctaaaatca
    18541 ctaaggtttt taaagatcgt agagaaggtt tagagatgga aatttcacgc cctaagcttt
    18601 gtcctacttg ccaaagtgag cttttagatg aaggaacttt aataaaatgt caaaatatag
    18661 attgtgagga tagacttgta aattctatca ttcattttgt ttctaaaaaa tgtcttaata
    18721 tcgacgggct tggagaaaat atagtagagc ttttatacaa acacaaaaaa atcactacgc
    18781 ttgagagcat ttttcattta aaatttagtg attttgaagg tttggaaggc tttaaggaaa
    18841 agaaaattaa caatctttta aatgctatag aacaagcaag agaatgtgag ctttttcgtt
    18901 ttatcacagc tttagggata gagcatattg gcgaggttgc ggctaaaaaa ttaagtttaa
    18961 gttttggtaa agagtggcac aagcaaagct ttgaagctta tgccaattta gaaggttttg
    19021 gagagcaaat ggctttaagt ctttgcgaat ttacgcgtgt taatcgtaca agaattgatg
    19081 agttttacaa gcttttaaat ttgaaaatag aaaaacttga aatcaaaagc gatggtgtga
    19141 tttttggtaa aacttttgta attacaggta ctctttcacg ctcaagagat gagtttaagg
    19201 ctttgataga aaagcttggg ggtaaggtaa gtggctcagt ttctaaaaag actgactatg
    19261 tgctttttgg agaagaggca ggttctaagc tgattaaggc taaagagctt gaaataaaat
    19321 gtatagatga aagtgctttt aatgagcttg ttaaagaata gttcttatat tttaacgctt
    19381 ttaagccttt ttggcttttt actaacttgg caaaggactg ttttttcttt atttttttta
    19441 attcctattt ttttaacact tttttgggaa ttctttttat ttttaaagct tagaaaaaat
    19501 attataaaag aagctacttt gattaaggga agtttgtttt atcgtattag tatgggggat
    19561 ttttatcttt atatttttag ttttttcttg gcgatttttg gacttatttc tttattttta
    19621 aattttttaa atcttgaaaa aattgatttt gtttttatat ttataatttt gcctttattg
    19681 atgatatttt taaaaaaaga attacatttg caatttgtag ataatgctta taatgatttt
    19741 agaatagttg ttatcgctag tttttttact gctttatttt atgcatttta tgggcttttt
    19801 tttacttaca atgaaatttt aaatttagaa cttttttcta ggaaaatcat tgcttataag
    19861 agcgcttctt ttgtttattt tgattttttg tctgaatttt tacattttat ttcaaattta
    19921 aaatttttta ttttttctta ttttggatat ttgggattta gggttttaaa ttttattttt
    19981 gattttttta atttttttat gttttgttct cttttggctt ttgtttttaa ttttgttttg
    20041 aaaataaaga taaaaataat tgttttattt ttgtgtttta tcatggtttt aggaagttat
    20101 tttttaaaag agcaaagaaa taatgcctta aaatccgaac aagaacaaat acttttatgg
    20161 atgaataatt ttgatttttt aaaagataat aacttaagtt taattcaaaa agaaaaagat
    20221 ctttttg
//
LOCUS       DARBAC010000018        19981 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.018, whole genome shotgun sequence.
ACCESSION   DARBAC010000018 DARBAC010000000
VERSION     DARBAC010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19981
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.018"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            102..404
                     /locus_tag="SB799_000478"
     CDS             102..404
                     /locus_tag="SB799_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEG0867738.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            complement(427..633)
                     /gene="ccoS"
                     /locus_tag="SB799_000479"
     CDS             complement(427..633)
                     /gene="ccoS"
                     /locus_tag="SB799_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEG0867739.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDAIELERRKKEALNKKRLS"
     gene            complement(630..2987)
                     /gene="cadA"
                     /locus_tag="SB799_000480"
     CDS             complement(630..2987)
                     /gene="cadA"
                     /locus_tag="SB799_000480"
                     /EC_number="7.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase"
                     /protein_id="HEG0867740.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKFFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLSHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGLFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLKMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFNGKEFAPKKVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGESIPKLIQKEDEIFSACMVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLSAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKVLDLNELYNFVKLSKHPISQNIASYLKQKGAKDLNLNFKKHSSIQAKGLS
                     AELNEELLLGGSSKFLQEKSIATKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIA
                     YLKKEKKELMILSGDHQKAVEKIARKLEIQNYQASCLPEDKMKAIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            3097..4395
                     /gene="rho"
                     /locus_tag="SB799_000481"
     CDS             3097..4395
                     /gene="rho"
                     /locus_tag="SB799_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEG0867741.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            4399..5928
                     /locus_tag="SB799_000482"
     CDS             4399..5928
                     /locus_tag="SB799_000482"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEG0867742.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEIDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEETLKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPQKIKAFYQAILTKDKEKVFAYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSILIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDAQIQEIKQENTTNITPRITPAPIIPNLEKKIEKNAYEILLDSIYDRDFDLA
                     ECFKQSTKFISFENNTLNISSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKAL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGEPSIE
                     N"
     gene            complement(5925..6446)
                     /locus_tag="SB799_000483"
     CDS             complement(5925..6446)
                     /locus_tag="SB799_000483"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HEG0867743.1"
                     /translation="MQQKCFCISKMIRFSKIIILLTVASLAGIVVFGNVTDYNSNFQF
                     VSHVMSMDTKPDYLGNAIVYRAITSPVIHHIGYIAIILFETFITLTALKGAYDMFKAR
                     NLDAQSFHNAKIFGIISLTCCCILWFFAFQVVAAEWFGMWMSKVWNGLPDATRLVTYM
                     FLALIFISLKNDD"
     gene            complement(6518..8617)
                     /gene="copA"
                     /locus_tag="SB799_000484"
     CDS             complement(6518..8617)
                     /gene="copA"
                     /locus_tag="SB799_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HEG0867744.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQEKRKDIIAKIKNLGFEILEDEQSLNAYKVKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGLKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGTLRIKANKKAMDSTLEQIKNLVFEAGNIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWALKADLNTAFLHACAVLLISCPCALGLATPIALVVASSNAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDQIFDLKGEGRVIVGSGIKYKEDSDIYLAGSAKFLHENEIDTKESDIFFDTFKEYVR
                     VYFAKNKKCLGGVLLSNALKDGAKELVLNLKKQNLKTFILSGDHVKNVEKIAKELQID
                     EFYAQLKSEEKLRIIQKFKKTLFVGDGINDAAALSAATVSMSFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFITLSPHIAALAM
                     CFSSITVVLNSLRLKRI"
     gene            complement(8617..8811)
                     /locus_tag="SB799_000485"
     CDS             complement(8617..8811)
                     /locus_tag="SB799_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HEG0867745.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIIERL"
     gene            complement(8801..9751)
                     /gene="czcD"
                     /locus_tag="SB799_000486"
     CDS             complement(8801..9751)
                     /gene="czcD"
                     /locus_tag="SB799_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HEG0867746.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSVDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSGIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCDLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            complement(9825..10088)
                     /locus_tag="SB799_000487"
     CDS             complement(9825..10088)
                     /locus_tag="SB799_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HEG0867747.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQASRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            complement(10159..10653)
                     /locus_tag="SB799_000488"
     CDS             complement(10159..10653)
                     /locus_tag="SB799_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEG0867748.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIALAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(10650..11426)
                     /locus_tag="SB799_000489"
     CDS             complement(10650..11426)
                     /locus_tag="SB799_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HEG0867749.1"
                     /translation="MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVGILICCIALGIYMTLSISDFGILR"
     gene            11493..12419
                     /locus_tag="SB799_000490"
     CDS             11493..12419
                     /locus_tag="SB799_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEG0867750.1"
                     /translation="MAKIGIVGLGYVGASSAYSIVTQGICSELYLYDIKQDLALAHAR
                     DLEDMSAIHFSYTKIFHVPNLENLASCDIIILAFRKESLKELPSRLVELQNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKFLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQKLGKDLDIQKLEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDMAFSMPAIIGKDGIEK
                     VFELKFNEKEKIKLENSKQQIKNAIQSVKDKI"
     gene            complement(12416..13018)
                     /locus_tag="SB799_000491"
     CDS             complement(12416..13018)
                     /locus_tag="SB799_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0867751.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGKLDITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEVKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLVNFILFTALGSAIWVAILVFLGYY
                     IGQNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(13099..13326)
                     /locus_tag="SB799_000492"
     CDS             complement(13099..13326)
                     /locus_tag="SB799_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867752.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            complement(13337..14746)
                     /locus_tag="SB799_000493"
     CDS             complement(13337..14746)
                     /locus_tag="SB799_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HEG0867753.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAEI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVGGQD
                     YSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPLDLDAGRNTRSSGP
                     VLYVDRAYLDYYITPEWIATIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEESGKVRDWMSDQKDADANLYYAAVEGELPIEG
                     MGDNLIIFNVAHMTDFALPIPGSTTLLGDDDGVINLGNLTLANIHFENYKAFGTNFNY
                     FVSLGYSNGANAHTLSANPTVQSQLEINEKDGYAVHVGGRYDFTKALKVGYEFFWGSR
                     YWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGG
                     AKKDKARADNIMLMYNVKF"
     gene            complement(14910..15392)
                     /locus_tag="SB799_000494"
     CDS             complement(14910..15392)
                     /locus_tag="SB799_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEG0867754.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGIHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            complement(15402..16109)
                     /locus_tag="SB799_000495"
     CDS             complement(15402..16109)
                     /locus_tag="SB799_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEG0867755.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFARKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            16218..16559
                     /locus_tag="SB799_000496"
     CDS             16218..16559
                     /locus_tag="SB799_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0867756.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIVLSIVG
                     IIMINIGEVKE"
     gene            16559..16867
                     /locus_tag="SB799_000497"
     CDS             16559..16867
                     /locus_tag="SB799_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEG0867757.1"
                     /translation="MYIFIIVLSALLDIVANLLLKKSDGFKHKIWGLAAIVNAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(16885..18477)
                     /locus_tag="SB799_000498"
     CDS             complement(16885..18477)
                     /locus_tag="SB799_000498"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEG0867758.1"
                     /translation="MKSIIFNEIKKILECDFTLENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALANPNDFSKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLILIKQNLEQAKIKIDSYVSERSYYDALNATLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVIDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMRADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSINENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(18489..18728)
                     /locus_tag="SB799_000499"
     CDS             complement(18489..18728)
                     /locus_tag="SB799_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEG0867759.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTSADASIDKTKKA"
     gene            complement(18730..19347)
                     /gene="gmk"
                     /locus_tag="SB799_000500"
     CDS             complement(18730..19347)
                     /gene="gmk"
                     /locus_tag="SB799_000500"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEG0867760.1"
                     /translation="MQGFILLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPRE
                     GEKNGIHYHFISHEEFQKGIDGDHFLEWAKVHENFYGTSLKHTQDALDNGKIVVFDID
                     VQGFKIARQKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKELS
                     DYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            complement(19350..>19981)
                     /locus_tag="SB799_000501"
     CDS             complement(19350..>19981)
                     /locus_tag="SB799_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEG0867761.1"
                     /translation="NKELQANISDFDDLPVVEEQEKEMDFDDIPEDAEFLGQAKDNEE
                     SEENLEEFSPVVEEDVQDEMDDFISNLSTQDQIKEELAQLDELDYGIDSDNSSKVLED
                     FKDEPILDDTELGTNEEEVVVPNLNISDFDALKESDIQEALGEEIVEKNEEPIVSNAT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
BASE COUNT         7023 a         3619 c         2630 g         6709 t
ORIGIN      
        1 tttaaaaaga aaataaacat tatctttaat ttcttaagat ttttattaaa aataaagata
       61 tataatacct agcaatctaa tttttactaa ggagaaaaca aatgaaaaaa ttattagtag
      121 tttctgcttt ggcatgtctt ggtgtttctg cttttgctgc agatggtgct acacttttta
      181 aaaaatgtgc agtatgtcat ggtgcaaatg ctgacaaagt ttacttaaac aaagttccag
      241 ctttaaaaac tctttcttct gctgaaagac ttcaatacat gaaagaatat tcagaaggca
      301 aaagaaatgc ttatggtcaa ggtgcgatca tgaaacttaa ccttaaaggt ttaactgaag
      361 aagattttaa agctatcgaa gctcatattg aaactttaaa ataatttcta aaaaaggctt
      421 ttctttttaa gaaagccttt ttttattcaa agcttctttt ttacgccttt ctaattctat
      481 agcatcacgt aaagaatcct catcatcatt taaagtagta aatttataat catcatcaaa
      541 ttgtttattc ttaatccccc aaagcaaagt tgccaaaatg ataaaaaacg ctaagataga
      601 aactcctatc atcatcatga ttatactatt cattctttga tccttaaagc atttaaaacg
      661 actattatac tactaaaaga catagaaata gcagcaaata aaggattaat catacctaaa
      721 aaagccaaag gtatggtaca agcattatag aacaaagaaa aagcaaggtt ttgcttgata
      781 attttaaagg tgtttttaga taatttgatg gcttttttta aagaaagcaa gtcatttttc
      841 aaaagcaaaa catcgctact ttctatagct agatcacttc cttctcttaa agtcatcgaa
      901 acacttgcat attttaaagc tagagcgtca tttaccccat cacctacaaa taaaactttg
      961 taatttttgc ttaaattttc tatagctttc atcttatcct cgggtagaca agaagcttga
     1021 taattttgaa tttctaactt tctagcgatt ttttccactg ctttttgatg atcgccacta
     1081 agtatcatta attctttctt ttctttttta agataagcga taagctcttt tgcaccttct
     1141 cttaaaacac tatcaaactc aaaaaaagct aaaattttac cttccttagc aaaaataaaa
     1201 tgagtattat caaattcctt agttgcaata ctcttttctt gcaaaaattt agaacttccg
     1261 cctaaaagca actcttcatt taactcagca cttaaacctt tagcttgaat acttgaatgc
     1321 tttttaaaat tcaaatttaa atccttagct cctttttgct ttaaatacga cgcaatattt
     1381 tgagatatag gatgtttaga aagttttaca aaattataaa gctcatttaa atcaagcact
     1441 ttatctaaaa aaacctcttt aagttcaagc tctattttag ttaaaatacc tgttttatca
     1501 aacaccacac aatcacattt gcttaaatct tctatcacac tagaactttt aaataaaata
     1561 tgctttttta aagccctacc taaggccaca agattgctca cgggcgttgc taaagccaaa
     1621 gcacaaggac aagcgataat caaaactgca atcgcattga ctaaagaaat ttcaaaactc
     1681 tcttctttgt aaaaaaacca aaaagcaaaa caaataaaag cgatcaataa aaccgttcta
     1741 gaaaaataag ccgaaagact attaaccaaa ctttcaagtt ttgctttttt agaacttgca
     1801 agttctaaaa gctgaataat ttgactgagt tttgaatcct tataaagctt tgttgcttca
     1861 tactccacac ttccatcaag caccatacaa gctgaaaaaa tttcatcttc tttttgtatg
     1921 agttttggaa tactttctcc atttaaagaa gaagtatcca cactcatttc accactttta
     1981 caaatcccat cgattaaaat tttatctcca gttttaagca aaattctatc ccctaaacaa
     2041 accttttgaa cttttttagg agcaaattct ttaccattga aaactaaaac ttcattttgt
     2101 aaaaaatcat taagcccatc tatggtatct aaagcacgct ttttgctaaa catctcaaga
     2161 tattttccta taaacacaaa gcaaattatc atcgccacag aatcaaaata cacttccccc
     2221 accctaaaaa acatagccca taaagaataa acataagcca aactcgctcc gctaatcacc
     2281 aatacatcca tatttaaact atgcattttt aaagttttaa aagcactttt ataaaaatga
     2341 gagcccgtat aaaaaagcac aggagaacaa aggataaatt cagcaaaatt taaaatatcc
     2401 ttagtatcct tatccatacc gctaaaaagt cctgcgtatt ttgccactgc tatccacatg
     2461 atattcatca cacaagctat agctacgaca agcttagaat aaaattccct ttttaataaa
     2521 tccgcttttt ttgaagcctt gctcgcatca taagcactcg ctttatagcc tatactttca
     2581 ataagtctta aaatttgcac caaagaaatg ctttgttcat caaaaacaat gcgtgcttta
     2641 tggcttaaat gattgatatc aagttctaaa attccttctt gcttggttaa aattttctca
     2701 ttaagccaca cacaagctgc acattctata ccgtgtatca tgagataaat ttcactaaat
     2761 ccttctttgg ttttagtgat aaactcatca taatttttca tttcattttg aaaatttaca
     2821 gggcttaggg tttgatttcc aagcttttca taaaactcat ctagtccact ttcatgtaaa
     2881 atttcccaaa cgctctcaca acccttacaa caaaaaaatt tacccttata ctctatcatt
     2941 tgagcttgtt tataatcaag tttgcaatgt tcacatttca taatcattct ttaaaaaaat
     3001 attttttata attataaaca aaatttgaca aaaagtgcat ttttttacta aaatcacatt
     3061 ttacaaaaat tattctgcta aatcttacga ggacttatgg aaaaagaaaa aaaacaacat
     3121 caaagaaccc acgttccagt ggaaggttat aaaatcgaag aattaaaatt attagatcta
     3181 gaaaatctag ttaaaatcgc taatgaatgt gaaatcgaaa acccaagaga atttcgccgt
     3241 caagaactta tttttgaaat tttaaaagca caaacaaaaa aaggcggttt tatacttttt
     3301 acagggattt tagaaatttc ttccgaaggt tatggctttt taagaggtat ggactctaat
     3361 cttagcgata gtgttaatga cgcttatgtt tcaaattcac aaattagaaa atttgctctg
     3421 cgtgtaggcg atatcgttac aggacaagtt agagaaccta aagatcaaga aaaatactat
     3481 gctcttttaa aaatcgaagc gatcaattat ctgcctttac aagaagccaa agaaagacct
     3541 ttatttgata acttaacccc tatttttcca acggaaaaaa tcaaactcga atacgatgcg
     3601 atgaagctta cgggtcgtgt tttagatctt tttaccccta taggaaaagg acaacgtggg
     3661 ctcatcgttg ctccaccacg cacaggtaaa acagaactta tgaaagaact tgctactgct
     3721 attgcaaaaa accatcctga aatgcattta attgtgcttt tagttgatga aagacctgaa
     3781 gaagttaccg atatgcaaag atgtgtaaaa ggcgaagttt ttagctctac ttttgattta
     3841 cctgcttata accatgtgcg tgtagctgaa ctcgtaatag aaaaagccaa aagaatggta
     3901 gaaacaggaa aagatgttat tatcctgctt gatagcatca caagactggc acgtgcttac
     3961 aacaccgcaa ctccaagcag tggaaaagtc ctaagcggcg gggtggatgc taatgcccta
     4021 cacaaaccaa aacgtttctt tggtgcagct agaaatatag aaaatggagg ctctttaacc
     4081 atagttgcta cagctttaat tgacacaggt tcaagaatgg atgatgtgat ttttgaagaa
     4141 tttaaaggca caggaaatag cgaaatagtt cttgatagaa atatcgctga tagaagaatt
     4201 tatcctgcaa ttaatatcat caaatcagga acaagaaaag aagaattact ccaaggcgtg
     4261 gcaaatcttc aaaaaatttg ggcgatccgt tcagcgattt ctcaaatgga tgatgttgaa
     4321 gcgttgaaat ttttatattc taaaatgctt aaaaccaaag acaatgtaga acttttatct
     4381 ataatgaacg agtaaaaaat gcttcaagct ttagcgatta aatacaggcc aaaaaccttt
     4441 gatgaactca taggacaaaa aacagttagt gtaagtttaa aatacgccct aaatcataat
     4501 cgcttagctc atgcttatct tttttcggga cttagaggaa gtggaaaaac ttcaagtgct
     4561 agaatttttt ctcgtgcttt agtttgcgaa caaggaccaa gcgatactcc atgtggcact
     4621 tgcaaacact gtcttgcagc acttgaaggc aaacatatag acattataga aatagatgct
     4681 gcaagtaacc gtgggcttga agatatacaa gccttaatcg aacaaaccaa atacacccct
     4741 tctatggcaa gatttaaaat tttcatcatt gatgaagtac atatgcttac cccacaggct
     4801 gcaaatgcac ttttaaaaac cttagaagaa cccccaagtt atgttaaatt tatacttgca
     4861 accacagatc ctttaaaact tccagctact gtgctttcaa gaacgcaaca ttttcgcttt
     4921 aaacaaattc cacagagtga aattttaaat catcttaaag aaattttact taaagaaaat
     4981 gttaaatttg aagaagaaac tttaaaattt atagcaagaa gtggcaatgg atctttaaga
     5041 gatactttaa ccttgcttga tcaagccatt attttttgcc aaaatgaaat cagcattagc
     5101 aagattaccg atatgttagg ctttttagat cctcaaaaaa tcaaagcctt ttatcaggct
     5161 atcttaacaa aagacaagga aaaagttttt gcatacttag aagaattaca agactatgaa
     5221 gcctcaagcg tgattgatga aatgcttttt tatttaaaag aaagcttttt tgcaaaaagt
     5281 acagaatttt ctattttaat ttatgaaaga tttttccgta ttttatcaaa agctaaaaat
     5341 atgctttgcg atgatgatgg ctttacgctt tgtgttatgg cttttatgat gatggaagca
     5401 agccatttaa aagaaattga tgcacaaatc caagaaatca aacaagaaaa tacaacaaat
     5461 attacaccta ggatcacacc tgctcctatc atacctaatc ttgagaaaaa aatagaaaaa
     5521 aatgcttatg aaatcttgct tgatagtatt tatgataggg attttgatct tgcagaatgc
     5581 tttaaacaaa gcacaaaatt tattagtttt gaaaacaata ccttaaatat aagctcaaac
     5641 gcacaaggac aaaatcgcga tacactcaat aaaggtttta aactcataca agaacttttt
     5701 aaagctaaat ttggagaaaa tgctaaaatt aatgtgcaaa aagcactaac aattgatgaa
     5761 aataagcttc aatccttaac tcaagaatta ccaaacaatg aaaataaaaa catagatatt
     5821 caaagttcta ttaatatgct taaagaaggg gccaaaaaat ttgacccaca agaagatctt
     5881 aaagaggctc ttaaagattg ttttggagag cctagtatag aaaattaatc atcgttttta
     5941 agagagatga aaatcaaagc taaaaacata taagttacca atcttgtagc atcaggtaaa
     6001 ccgttccaaa ctttgctcat ccacattcca aaccattctg cagcaactac ttggaaggca
     6061 aaaaaccata aaatacaaca acaagttaaa gaaataatcc caaaaatctt agcattatga
     6121 aagctttggg catctaaatt tctagcttta aacatatcat aagcaccttt tagagctgtt
     6181 aaggtaataa aagtttcaaa aagaataatt gctatatagc ctatatgatg aatcacagga
     6241 gaagtaatag ccctataaac tatagcatta cccaaataat caggctttgt atccatactc
     6301 atcacatgcg aaacaaattg gaaattagaa ttgtaatctg tcacatttcc aaaaaccact
     6361 atacctgcta acgatgcaac ggtaagcaaa ataataattt ttgaaaatct aatcattttg
     6421 cttatgcaaa aacatttttg ttgcatttat actcctttaa taatatattt tggtaatatt
     6481 aattatatat aatatattct taataaaaat taaattttta aattctttta agtcttaaag
     6541 aattaagcac cacggtaata gagctaaaac acattgcaag tgctgctata tgaggactta
     6601 aagtgataaa aggtacaaat cctgccgcga taggaatgca aagcacatta taaataaaag
     6661 cccaaaaaag atttagctta ataatactgc gtgttttttt agcaagttta aaacatttaa
     6721 aaatcgccga taaatcatct tttatcaaga taaaatctcc tgtttttttt gcaagttcat
     6781 ttgcttttga aaaactcata ctcacagttg cggcagataa agccgccgca tcattgatcc
     6841 catctcctac aaaaagagtt tttttaaatt tttgaatgat tcgtagtttt tcttcactct
     6901 taagttgagc ataaaattcg tctatttgta attctttggc tattttttct acatttttta
     6961 catgatcgcc gcttaaaata aaagttttaa gattttgctt ttttaaattt aacacaagct
     7021 ctttggctcc atcttttaaa gcattgctta acaaaacacc gcctaaacac tttttattct
     7081 tagcaaaata caccctaaca tattctttaa aagtatcaaa aaagatatca ctttcttttg
     7141 tgtcaatttc attttcgtgc aaaaacttcg cactacctgc gagataaata tcactatctt
     7201 ctttgtattt tataccagaa cccacaatca ctcttccctc accctttaaa tcaaaaattt
     7261 gatctttatg caaagcctta gctataggat gagagcttaa actttcaatt tgacataatt
     7321 tatcaaaatc atctttagaa agattgtgtt taaaaatact caaattttcc tttgtcaatg
     7381 tacccgtttt atcaaaaaaa gcatacttaa ctaaggctaa tttttctaaa gcggcaggat
     7441 ttttaataag aatgaaattt tttgccgcat ttgaacttgc cacaaccaaa gctataggtg
     7501 ttgcaagccc taaagcacaa ggacaagaga tcaaaagcac agcacaagcg tgtaaaaaag
     7561 ctgtatttaa atctgctttt agcgcccaaa aaacaaaaac taaaaaagca aaaaatatta
     7621 taccccctac aaaatattta gaaatttgat ctgctaaatt tgccaaagga cttttgatat
     7681 ttcctgcttc aaaaactaga tttttgattt gttctaaagt actatccata gcctttttgt
     7741 ttgctttgat ccttaaagta ccatttaaaa ctactgctcc tgcttgaact tcgtcgcctt
     7801 ctttttttaa aacaggcaaa aactccccat ttaaaaaact catatcaagc tctgcactcc
     7861 ctaaaagcac cactccatct gcgacaatgc tttctccttc ttttaccaaa agcacatcgc
     7921 cacttttgac aaaagaactt gaaatttctt tgatactttc atcttcaagc aaaatttttg
     7981 tcttttttgt gtctatattt tctaaaattc tttgataatc ttgtgcttta aatttagcct
     8041 tactttcaag atattttcct aaaagcacaa aagaaataat catcattgca ccgctaaaat
     8101 acaaatcttc ttctttaaaa atttgcaaat acaccaaaaa agaatacaca aaagcactca
     8161 aagtccccaa agctacaagg gtgttcatat ctaaattttt acttttaagt cctaaaaaag
     8221 catgagaaaa aaagtctctc ccacaataaa atatcccaaa aaaactcaaa gccatttgga
     8281 tattttgcga aaaagaactt ttaacaaaca tttcaaaata cataataatc acactcaaaa
     8341 ctatacttaa gagcaaattt tttcttaatt ctaagtgttt ttttaccttg tatgcgttta
     8401 agctttgttc atcttctaaa atttcaaagc ctaaattttt aatttttgcg atgatatctt
     8461 tgcgtttttc ttgatcttca agtaaaaaaa ccccactaga attcacataa gaaacactag
     8521 catctttaac accatcaatt tttttacaag ctctttctat agcattagaa caattaacgc
     8581 aagtcatttt gcctattttt atacgcaatt cttccattat aaacgctcta tgatctcaaa
     8641 acctaaatct tgaaattctt ttgtaaaatt tgatacttga ttttcttcta aatttaaact
     8701 taaaattttt tgctccaaat ccacttctat atttccaaat tcatcttcaa gagaattttt
     8761 gatcaaattt acacaattca tgcaattaac attttttact ttaaatttca ttttcgctcc
     8821 ttataggttg tatagtaatg tgcccgattt caaattcatg tagtaattta tgggataaat
     8881 cctgagatag tttttcaaat tcctttagat cgcaaactct tacttttaaa tgcatggaag
     8941 ctactaacat tttattggta atttgagtaa tatgcaaatc caccacctca tccacactag
     9001 gatttaaaag caaaacttgt cttacttttt ctatatccac aggagaactt tcaagcaaga
     9061 cattagcact ttgtttaagc aagataatcg cccatcttaa aagcaagatt gataatacaa
     9121 tagctaaaat cgtatctata taaacaatac cactaaaata caccacaatc ccacctataa
     9181 taaccgctaa agagcccaat aaatcactca tcatatgcaa aaaagcggac ttcatattga
     9241 cattttctaa atttgcaccc ttaaacatca tcaaagcatt aatcccattt accaaaaagc
     9301 ccaaaatagc tacaattatc atggttttag catcaatttc ttttggatta ataaattttt
     9361 ctatagcctc ataaatgata aataaagccg ataaaataat ggttaaagca ttgataaaag
     9421 ccactaaaac ttcaagacga aaatacccaa aggtcttttg atgatcttgc catttttcta
     9481 cagctataat ggctaaaaaa ctaagagcta aggcaaaaac atcagaaaac atatgcaaag
     9541 tatcgcttaa aagtgctaaa gaatttgaaa ggattgaata aataaattgc acaagcatca
     9601 tagaaaaagt cattaaaaga gaaattttta aaatcttttt atccacactc cttgcatcag
     9661 catgggaatg atgatgttca tgagaatgtt cttcgtgatt atgatgacaa gatttgttag
     9721 ctaaaggctc gtgtgataaa aatttataca tcttatatcc tttttgcttg acattttaag
     9781 atattaagct aaaaaggata taaatatttg ttatttttat aaaattaaaa gtcaaaaagc
     9841 tcgcctagcc aactttcttt ctttttcttt ttatagtagt cattgtgctg atgataagct
     9901 gagtcattat atcttgactc ttgtcttgaa gcttggttaa aatttgctgt attagggaca
     9961 ctgcgttcta tgattttgtc aagttctcca cgatcaagcc aaacgccacg acactttgga
    10021 caataatcaa tctcaactcc actcctatca ctcataacca aatctacatt acaaactgga
    10081 cataacatac aatacctttt tttaaaattt ttaatttaaa attataaaaa gaaatattaa
    10141 acaaatttgc aacaagtttt aatgtttttt tgcatgtcta gtcatcataa aactttgttc
    10201 aaaaaatata agcaaagtaa cactcactcc tatagctaga gccaaagtca cagaaacagt
    10261 tgtaaaaaaa taatcaaaaa attgaaccaa aaattcagac ttagccttca aatcatcact
    10321 gcgtataaaa gaaataagat acaaaatcgc tttataagcg taaattccag gtatcatagg
    10381 aataagagca ggaaaagcga taatttcagc aggggtttta atgatttttg ctaaagcaat
    10441 tcctaaacat cctatgcaaa atgaagcaac aaaagttgca attgctaaag tttgaaaatg
    10501 aaaatattcc accaaagtaa aacgaagccc atgtgcaatt gctgctaaaa gagcagataa
    10561 aataagggtt tttaaaggtg ggttgcaagc ataagcaaaa ccaaatcccg ccacagcagc
    10621 aaaaaacata tctcttaaaa taaattcaat catcttaaaa tcccaaaatc cgaaatacta
    10681 agcgtcatgt aaattccaag cgctatacaa caaatcaaaa tccctacact gataatacga
    10741 ctaagtccca ttaaaatatg atcttttaat atatcaatca cagaatttat aaaaaatacc
    10801 cctggtataa gatacaagat actagaaccc aaagccacat cagaagtatt ggtatatccc
    10861 atatccagcc caaaaaatac aaaccacgat gagataaaag aacaaagaat atattgaatt
    10921 cttaaatcaa tctttgcttt agttaaaata tatcttaata acaatcccac aaatgttgca
    10981 aaaaatacta aatttccagc accaaaatca ccaccaaaaa gtctacaaaa agccgaattt
    11041 gccatagaaa caaataaaag attaagcaaa taagaatgct ttttttgttg agaaatttgc
    11101 tcaaaaacga ctttcgcttt ttcaagatcg tatttgtgat catatatagc ccagcttaaa
    11161 gcacttaaat caaaaataag cttaaaatta acatgggcat gatgattggg tataacataa
    11221 gttctttgaa tggagttatc atccatatct acaacattta aagtgatatg atgaaaaaag
    11281 aaattgatat ttatctcata gccataaacc tcagctattc ttcctacgca ttttgccacc
    11341 ctagctgtat aagttccagc acctagcaaa gttttagtat atacgattaa aaaattagtt
    11401 aatctttgta tatcaggttt ttccatattt taataatctt tgattgaatt tgttataatt
    11461 atagcaaatt ttaaaataaa taaggagaaa aaatggcaaa aatcggtata gttggtttag
    11521 gttatgtagg agcttctagt gcttatagca tagttactca aggaatttgt tcagaacttt
    11581 acttatatga tataaaacaa gatttagctc tagctcatgc aagagatttg gaagatatgt
    11641 cagccattca tttttcttat acaaaaattt ttcatgtgcc aaatttagaa aatttagctt
    11701 cttgcgatat tatcatttta gcttttagaa aagaaagttt aaaagaacta cctagtcgct
    11761 tagtagaact tcaaaacaat atcctcgaac ttaaagacat tgtcttaacc ttaaaaaatg
    11821 ctaattttaa aggtaaatac atcgtcgcaa caaatccaaa tgacaccata acttactaca
    11881 ctcaagtatt aagccaatta cctaaaaatc atgtttttgg cagtggaaca aatttagata
    11941 gttcaagact taagaaattt ttagccaaag atttaaacat aaattcaaaa gatatttttg
    12001 cttgtatgat tggcgaacat ggagattctc agtttgcagc actttctaat gcaagcgttt
    12061 taggacaaaa tttattagat ttttataagc aaaaattagg caaagattta gacatacaaa
    12121 aacttgaaaa agctgtgatt agcgaagggt atttcatcta tgaacgcaaa ggaaggacag
    12181 aatttggcat aggaacttct tgtgcaaatt tagccaaagc catcctagaa gatagaaaaa
    12241 gtttacatcc tgtaagtgtg gtttttgatg atatggcttt ttcaatgccc gctatcatag
    12301 gaaaagatgg tatagaaaaa gtttttgaat taaaattcaa tgaaaaagaa aaaataaaat
    12361 tagaaaattc aaaacaacaa atcaaaaacg ctatacaaag cgtaaaagat aaaatttaag
    12421 cctttttaaa aggctttttg attttgatat aaattaaact tgctaaaatc acaaaaacaa
    12481 ttataatgat taaaatttga gttaaataag ttttaatcaa ctcttcattt tgtcctatat
    12541 aataacccaa aaatacaagt atagccaccc aaatagcact accaagtgca gtaaaaagta
    12601 taaaatttac aagtttcatt tttaccaaac ctgcaggcat agaaatatac tgacgaatcc
    12661 ctggcaaaag acgacaagta aaggttgaaa attccccgtg tttgttaaaa aattcttcaa
    12721 atttagcaaa tttgacttca tttataccaa aatacttacc ccattttaat acaaaatttt
    12781 taccccaaaa aaagcaaata taataattaa tcaaagcccc taaaacagaa cctaaagtcc
    12841 cactaagtat acaaagagtg atatcaagtt tgcctttatg tgccaaatat ccagcaggta
    12901 tcataacaac ttcacttgga aaaggtataa aacaactctc taaggtcatt aagataataa
    12961 tacccaaata cccccaagca ctagccgtct caacaataaa agaaatgatt tcttgcatat
    13021 tagccttatt tgaagaaaat tttaaaaaat tgtagcttaa aagattaaac agtaaaaagc
    13081 ggttttacac cgcttttttt atttacctgc aactgaaact tgatttggat tgtctgctgc
    13141 acgagcgatc atgcactctt ttaaaacagc agcatcagct ggatcgctaa cttttttatt
    13201 aatccagcgt tcaacttgtt tcattgtttt tgactctggc tctggagctt cgtattttgc
    13261 cattaaactt gcacaatcag ccaaagcaat gataggtaat aaacttgcaa aaagtatttt
    13321 tctcatcttt tgctccttag aattttacat tatacattaa catgatatta tcagctcttg
    13381 ctttatcttt tttcgctcca ccaaatggta agccacgatt accccaaata ttttggatat
    13441 tagtataact taagcgtaag aattgatatc tatcaagttg ataaatcaca taaaaatcat
    13501 gtgccgttcc tcttgtcatt cttatattaa gtggatcatt gatacttgga cggctcatag
    13561 tataccaata tctacttccc cagaagaact cataccctac ttttaaagcc ttggtaaaat
    13621 catagcgtcc gcctacatgc acagcatagc catctttttc attaatttcc aattgagatt
    13681 gtacagtagg atttgcactt agagtatgtg catttgctcc gttagaatac cctaaagata
    13741 caaaataatt aaaatttgta ccaaaagctt tgtaattttc aaaatgaata ttagctaaag
    13801 taagattacc taaattaata actccatcat catcacctag taatgtcgtc gatcctggaa
    13861 taggcaatgc aaaatcagtc atatgagcta cattgaagat aataagatta tctcccatac
    13921 cttctatagg aagctctcct tctactgcag catagtaaag atttgcatca gcatcttttt
    13981 gatcgctcat ccagtctctt actttaccac tttcttcatc ccattgataa gttttaccat
    14041 aagctgcacg gatagctacc ttatgatctt gcaaactttc aggtttataa gtgatcactg
    14101 ctgcatcacc tagagcgttg attgccaagg ctggataagt tgattgtctt aaagcattgt
    14161 ttctaagatt acttcctgga ccatcggttc ctggctgtct tcctatggtt gcaatccact
    14221 caggtgtgat atagtagtca agataagctc tatctacata aagtacaggc ccacttgatc
    14281 ttgtatttct tcctgcatct aaatcaagtg gacttccact ccaacccatt tgagaccagt
    14341 ttttagccat agacaaacga ccatagaatt tggttttatc attaatatca gcattcatat
    14401 ttaaatgaag ctcattcatc catttgttat tagcactata atcttgtccg ccaactttat
    14461 agtttgtatt tgaaaccgct gttgaaaact caagtccaaa tttaaccttg cttaaagcag
    14521 cttgaaattc tgtttcatcg gctctatcat taagatcagc aagttcagct tttacagctt
    14581 cattttgctt agcttgagct tctctttctt ttctgatttc tgcaagttca gcttgaattt
    14641 gcgcaagctg tttttgaagc ttggttatct catcatctgt atttttagca aaaagtgaag
    14701 atgaaagaag acaggcactt aaaataagtg aaaacttagt tttcataatc ataactcctt
    14761 gtaattttgt tacatttagt aaattaaaat tgtgattata gaaaaaaaag tttaaaaaaa
    14821 aattatacat taatcatttt tagctagtca aacttatgac tagctttgta aatattgtag
    14881 tttcaaaaaa gttttaaaat tttaaatttt taaattttat cgcaaatttt tatgtctaaa
    14941 attttatctc cttggcgtat agagtctaaa acttctaaac tttcttcatc ttttggatca
    15001 atttgcccaa aaacagtatg aattccatct aaatgagctt gagggctgtg acaaataaaa
    15061 aattgagaac cacccgtatc gcgtcctgcg tgtgccatag ataaggttcc acgctcatgt
    15121 ttatgttctt gatcatcaca ttcgcaaatg atttcatatc caggcccacc tatgccattg
    15181 ccgtgcggac aacctccttg tatgacaaaa tttgggatca cgcgatgaaa atttaaatct
    15241 ttataaaatc cttcattagc caaagtagca aaattacaaa ccgtttgtgg agcctcatca
    15301 ccaaaaagtt ttagtttcat tgtgcctttt tcagtttcta tgagagcaaa tttgtattca
    15361 tttactttgc ttgtgtcgat tgtttttatc attatttctc cttaatctat atttgtataa
    15421 acagcttgaa catcatcatc atcttctaac ttatctaaaa gtttttctat atcgctaagc
    15481 tgttcttcgc taaagcttac aggattgttt ggtatatact caagccctgc ttttttaaga
    15541 actaaaccct tagcttctat agcagaactt agctcaccaa aggcagtata atcaccgcta
    15601 attactaact cttcttcatt ttgttctaat tcttcaagtc ctgcatcaat caaatcaagt
    15661 tctaattctt ctaaatctcc tgcaaatttt tcaagatgaa aaaccgcttt tctagcaaac
    15721 ataaagccta aagatccatt ttgtaaaact tctcctccat ttttactaaa aatagctttt
    15781 acattagcca cggtgcgtgt agggttatcg ctcatacatt caactataac caaagctcca
    15841 tgtgcagctt ttccttcata atgaatgttt ttaatatctg cgctatcttt tccactcgca
    15901 cgcttaatag ccgcatctat attatctttt ggcatattat ttgcttttgc tgtggctata
    15961 gcacttctta attttggatt catatcagga tcagtgccac cttctttagc agctacttgt
    16021 atggctttag caagcttagg aaaaagctta ctcattttat cccatctagc ctctttagaa
    16081 gctcttcggt attcaaacgc tcgtcccata aattctcact ttctttaaag atttttaaac
    16141 ttaaaagtat aaactaaaaa ggctaattaa agctttaaat ggtatgattt taccatttat
    16201 ttttggggag aagctttttg aatatcgcaa aaaaagaact ttttgttgct tggtttttct
    16261 tgattgctgc tattgtattt gaagttttag gtactagttt tttaaaaatg gaaaatcaaa
    16321 ttttaggcta tatatttatg gctttattta tagctttttc ttattttttt atgggcaagg
    16381 cgattaaaaa aattcaagta ggcatagcct atgctgtatg ggaactttta gggattattc
    16441 ttatactttt agtttctttt atagttttta aagagagttt aaccttaact caaattctag
    16501 gcattgttct ttctatcgtt ggaattatca tgattaacat aggcgaggtt aaagaataat
    16561 gtatattttt atcattgttc tatcggcatt gttagatatc gtagcaaatt tattactaaa
    16621 aaaatcagat ggttttaagc ataaaatttg gggcttggct gcgattgtca atgctatact
    16681 tgcttttttc ctactttctt tttctttaaa atatgttcct ttaagcatag cttactcaac
    16741 ttggggtgct ataggcatca taggaacttg tcttggtgga tggattttat ataaagaaaa
    16801 attaaacaaa ataggaattt taggtatcat tatcgtaata atagcagtat ttttgctaaa
    16861 ttattaaaac agcaaaatgc tgttttaatg ttccattttg tttttcgctt caatacccat
    16921 taaagaaaat gcggttttaa tactaagagc aactaaagaa aataatttaa gcaaatcatt
    16981 ttcatttata gaacctacaa ctttattttc attgtagaat ttatgaaaat ttgcagccaa
    17041 atttttaaga taatcaggaa ttttttgcaa agctctagcc tcaaaagcat cgtttaaaat
    17101 agcttttaaa ttcaaagctt caaaaagtaa attaacacca tcttgattta aactttgtaa
    17161 atcagctctc attacatcat cgattttttt accagcttta gcaaacactt gatgaattct
    17221 agcgtgtgcg tagttgatat aatacacagg attagaacta tcttcttttt gcaaatcact
    17281 aatatcaaat tccaaatgag tatcgcactt tttactcaaa aagatataac gcaaagcatc
    17341 acttcctatt tcatcaatca catcgctcat caagataaaa tttcctgctc ttttactcat
    17401 tttataaggc tctccatctt taagcaagga aaccatttgt gctaaaataa tctcaagatt
    17461 attagagtca aatcccaaaa actccatcgc agctttcatt ctagggatat aaccatgatg
    17521 atctgctccc cagatattaa tacactttcc ataaccacga ctcattttat ccttatgata
    17581 aacaatatct gctgccaaat aagtcccgcg tccatcttca cggataatta ccctatcttt
    17641 ttcatcgccc ttttgcgaag aagcaagcca aattttacct tcttgctcgt aaattccttt
    17701 atgctctttc aaagattcta aagttgcatt taaagcgtca taatacgatc tctcgcttac
    17761 atagctgtca attttaatct ttgcttgttc taaattttgt ttaatcaaaa taagcatttt
    17821 atcttttgcc caatcagcta aactagggat attttcttca ctaaaaaatt ctttaccaaa
    17881 tttttcaaaa gcttcttttg ccaaatctgc tatatactcg cctttgtaat attgctctgg
    17941 atattcaaca ttttcatgaa gtatattttc tttcacactt agtaaaatag aaagccctag
    18001 taaataaatt tgattacccg catcattgac atagtattct gtatcaaatt tataacccaa
    18061 atgtcttgca agtcttgtta aggtgtctcc aaaaacagcg cctcttgcat gtcctatatg
    18121 taaaggtcca gtaggatttg cactcacata ttcaagcaaa aaactttctt gttttttttc
    18181 tcctttagaa aaatcatttg gatttgctaa agcctgattt gcaagttcat ttaaaaaagt
    18241 tttggaaatt ctaaaattta aatacccatt tacagcttca accgattcaa aacaatcatg
    18301 attttgaaat ttgctcgcta agtcgctagc gatcaacata ggagattttt ttaattcctt
    18361 agccagtgaa aaagccaaag gggtagcaaa atgtgctaaa tttttatcct ttggattttc
    18421 aagtgtaaaa tcacactcta aaatcttttt aatttcatta aaaataatac ttttcaaaag
    18481 actaaacctt aagctttttt tgttttgtct atacttgcat cagcacttgt attattagtt
    18541 gtgtttttgt tttcttctat tttttgagta ttttttgcta cttcatcatc attattcatt
    18601 tcatctttaa aagttttaat acctttgcct aaaccctttg caagttctgg aatttttttt
    18661 gctccaaaaa gcaatacaac aatcaataaa ataatcaacc aatgacttgg acttgaccaa
    18721 ccacccattt tattctcctt cattccaaat attttgaatt tgtcctagat tctgcccttt
    18781 ggttctaaat ttatgggcaa ttaaaatcgc tcgcaatgct tcataacttt gctttagctc
    18841 atcattaatg ataagataat catagtcgct aagttctttc atttcatcac tagcgttttg
    18901 taatcttttt tctagttgta ttattgtatc agtatttcgc ttaataagtc ttttttttag
    18961 ctcatcttta ttttttgtag taataaaaac agaaacaatc ttatcagcca ttttttgtct
    19021 ggctatttta aatccttgca catcaatatc aaaaacaact atttttccat tatctaaagc
    19081 atcttgagtg tgctttaaag aagtgccata aaaattttca tgcaccttag cccattctaa
    19141 aaaatgatca ccatctatac ctttttgaaa ttcttcatgg gatatgaaat gataatgtat
    19201 tccatttttt tcaccctctc ttggtttgcg agttgttgaa gaaatagaaa aataaagctc
    19261 atcttcaaat tcatcaaaaa gtttttttaa aagagttgat tttccagctc cactaggacc
    19321 tgaaatcaac aaaataaaac cttgcaattt taatcctctt taaaactaat gtttatattt
    19381 atattcatat tcataccctt aagagcagct tttaaggtat catccttaat acttgaagtg
    19441 atcgctcctg ctatgctttg gctaagctca ttaactatct cttcactatt atcatcttta
    19501 gttgcattgc ttactatagg ctcttcattt ttttctacaa tttcctctcc aagagcttct
    19561 tgtatatcac tttctttcaa tgcatcaaaa tcacttatat ttaaatttgg cacaaccact
    19621 tcctcttcat ttgttcctaa ttctgtatcg tctaaaattg gctcatcttt aaaatcttct
    19681 aaaaccttgc tactattatc actatcaata ccataatcaa gctcatcaag ttgagctagt
    19741 tcttctttga tttgatcttg agtgctcaaa tttgaaataa aatcatccat ttcatcttga
    19801 acatcttctt ccacaacagg agaaaactcc tctaaatttt cctctgattc ttcattatct
    19861 tttgcttgac ctaaaaattc agcatcctca ggaatatcat caaaatccat ttctttttct
    19921 tgctcttcaa ccacaggaag atcatcaaag tcgcttatat tagcttgtaa ttctttgtta
    19981 t
//
LOCUS       DARBAC010000019        19791 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.019, whole genome shotgun sequence.
ACCESSION   DARBAC010000019 DARBAC010000000
VERSION     DARBAC010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19791
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.019"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..107
                     /locus_tag="SB799_000502"
     CDS             <1..107
                     /locus_tag="SB799_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HEG0867762.1"
                     /translation="ILKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            108..1670
                     /locus_tag="SB799_000503"
     CDS             108..1670
                     /locus_tag="SB799_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEG0867763.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQNFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKENNDTIAMENHKSILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIILTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            1670..2794
                     /gene="cydB"
                     /locus_tag="SB799_000504"
     CDS             1670..2794
                     /gene="cydB"
                     /locus_tag="SB799_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEG0867764.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRAMKKLMINSILFL
                     PFFLGFLAWIFLKDGFSVDANGVVSMSANLYLYNFLNQMIFAILLAIGVILVLLGMVQ
                     GAKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLNDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(2988..3683)
                     /locus_tag="SB799_000505"
     CDS             complement(2988..3683)
                     /locus_tag="SB799_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEG0867765.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVN
                     FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPIL
                     HIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDII
                     FNELCKGEIKQDSKEKYLNIINKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLI
                     HALDAANEALKDL"
     gene            complement(3803..4498)
                     /gene="ung"
                     /locus_tag="SB799_000506"
     CDS             complement(3803..4498)
                     /gene="ung"
                     /locus_tag="SB799_000506"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEG0867766.1"
                     /translation="MEEITINIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQN
                     IIIYPPANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNV
                     FKELQNDLNITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHK
                     LSNEKSGLVFMLWGNYAKNKEILIDNAKHLILKAAHPSPLARTGFLGCKHFSKANEFL
                     KKVGKIPIDWKIV"
     gene            4769..6175
                     /gene="aspA"
                     /locus_tag="SB799_000507"
     CDS             4769..6175
                     /gene="aspA"
                     /locus_tag="SB799_000507"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEG0867767.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVAAYSLFNSIVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            6192..7529
                     /locus_tag="SB799_000508"
     CDS             6192..7529
                     /locus_tag="SB799_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEG0867768.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     ILHGEDKPGAKLSVGIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLI"
     gene            7637..8998
                     /locus_tag="SB799_000509"
     CDS             7637..8998
                     /locus_tag="SB799_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3014 family protein"
                     /protein_id="HEG0867769.1"
                     /translation="MKIKVGLIFSGIVCLFLTACVNQVKQNTTFENALTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAAEESYKYDVDLENVGSKAA
                     KFVGTTLLNDTIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRALMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKAADLLREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVVVRSFAPYLPASVAI
                     MEK"
     gene            9008..9376
                     /locus_tag="SB799_000510"
     CDS             9008..9376
                     /locus_tag="SB799_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HEG0867770.1"
                     /translation="MKKNILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDLIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLASDTRAKDFRLEIKAKN"
     gene            9400..10023
                     /gene="lpoB"
                     /locus_tag="SB799_000511"
     CDS             9400..10023
                     /gene="lpoB"
                     /locus_tag="SB799_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HEG0867771.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
     gene            10105..11442
                     /locus_tag="SB799_000512"
     CDS             10105..11442
                     /locus_tag="SB799_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867772.1"
                     /translation="MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKD
                     ITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAM
                     LNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL
                     DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDV
                     GVIAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGA
                     PIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLKDERTTGD
                     TYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSEN
                     GIEHVGAVRFYSYENLANTNEALNSKSNTTKNEAKKSSSIQRSSNVVNSMDDF"
     gene            11452..12654
                     /locus_tag="SB799_000513"
     CDS             11452..12654
                     /locus_tag="SB799_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867773.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANEAALK
                     QIANRIAGDILNAIYPLKVASVENNEVVFSQSLNQGDVYECFALGKAIKDTYTKENIG
                     RVENKTGSIEITRTSPKLSYAKITEGGVKVGDICRPLIGSNSGNGYTIGRDANYQTEE
                     GGGVNLGF"
     gene            12813..13121
                     /gene="rplU"
                     /locus_tag="SB799_000514"
     CDS             12813..13121
                     /gene="rplU"
                     /locus_tag="SB799_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEG0867774.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            13132..13386
                     /gene="rpmA"
                     /locus_tag="SB799_000515"
     CDS             13132..13386
                     /gene="rpmA"
                     /locus_tag="SB799_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEG0867775.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            13495..14532
                     /gene="obgE"
                     /locus_tag="SB799_000516"
     CDS             13495..14532
                     /gene="obgE"
                     /locus_tag="SB799_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEG0867776.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISIVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVNLGEEFAEQITLNINELENYLKEINNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKTLRNNK"
     gene            14655..15410
                     /gene="proB"
                     /locus_tag="SB799_000517"
     CDS             14655..15410
                     /gene="proB"
                     /locus_tag="SB799_000517"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEG0867777.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE"
     gene            15484..16401
                     /locus_tag="SB799_000518"
     CDS             15484..16401
                     /locus_tag="SB799_000518"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEG0867778.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAVLESLECDIKDK
                     NSSEVFELLANLAAKLILSTLLNFDKIIPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNARMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSEDSLC"
     gene            16364..17017
                     /locus_tag="SB799_000519"
     CDS             16364..17017
                     /locus_tag="SB799_000519"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEG0867779.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCEQIRNGKIDGNFAIYALEQTN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKELLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFSPQNTALCDIEISLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            17014..17799
                     /locus_tag="SB799_000520"
     CDS             17014..17799
                     /locus_tag="SB799_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEG0867780.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            17805..18641
                     /locus_tag="SB799_000521"
     CDS             17805..18641
                     /locus_tag="SB799_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEG0867781.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KL"
     gene            18702..19127
                     /locus_tag="SB799_000522"
     CDS             18702..19127
                     /locus_tag="SB799_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEG0867782.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLGVNDELEAIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAVQKKELQEHLNIHLPELKQALQNNIKKI"
     gene            19138..19650
                     /locus_tag="SB799_000523"
     CDS             19138..19650
                     /locus_tag="SB799_000523"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEG0867783.1"
                     /translation="MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            19653..>19791
                     /locus_tag="SB799_000524"
     CDS             19653..>19791
                     /locus_tag="SB799_000524"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The delta subunit is part of
                     the catalytic core of the ATP synthase complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit delta"
                     /protein_id="HEG0867784.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NE"
BASE COUNT         7049 a         2586 c         3518 g         6638 t
ORIGIN      
        1 tgattttaaa actttttgtt tttgatgtaa attttaattc tatttttaaa agcgacaaag
       61 aaaaaagcac ttttgtactc aaaaatctta cactcgaagg aaaataaatg aacgaactta
      121 gtagcgttga ttggtcaaga gcgcagtttg ctttaactgc actttatcat tttttgtttg
      181 tgcctttaac cttaggcttg tcttttatga ttgctatcat ggaaaccatc tatgtaaaaa
      241 ccaaaaatga aagatggaaa aaaatcacca aattttggct ttcattattt gccataaatt
      301 ttgctatcgg tgtagctaca ggtattataa tggaatttga atttggaaca aactgggcaa
      361 attatagctg gtttgtgggc gatatttttg gtgcaccttt ggcggttgaa ggtattatgg
      421 catttttctt agaggctact ttttttgcag ttatgttttt tggctgggat aaagtaagta
      481 agggttttca cttactttca acttggtgtg tggctatagg aagcaatctt tctgcttttt
      541 ggattttagt ggcaaatggt tggatgcaat atcctgtagg aatgagcttt aaccctgata
      601 cagcaagaaa tgaaatgcaa aacttttttg aagtagcgct ttctcctgta gctatttcaa
      661 aatttttaca taccataggc agtggttatg tgatttcagc tttatttgta atgggaattt
      721 cagcttggtt tatgttaaag ggacgccata ttatcgaggc taaaaaaagc ttagttgtag
      781 gagctagttt tggtttggtt tgttcaatct ttttattttt cagtggagat gaaagtgctt
      841 atcgtgtaac tcaaactcaa cctatgaaac ttgcagctat ggaaggggtt tatcaaggtg
      901 aacatcgtgc agggcttgtg ccttttggaa ttttaaatcc taaaaaaacc atagataata
      961 acgaaagtgt gtttttattt gacattacta taccttacgc tctttctata ctaggaaacc
     1021 gtgatccaaa ttcttttgtt ccaggaattg aagatttgat ctatggaaat gaaagtaaag
     1081 gtatagaacc tatgcaaaat cgtatcgata gaggaaaaat cgctatacaa gctctaaaag
     1141 actataaact tgctaaagaa aacaatgata caatagctat ggaaaatcac aaatccattt
     1201 tagaaactca ttttaaagat tttggttatg gatatttaga aaaaccaagt gatactattc
     1261 cgcctgtggc tttaactttt tatagctttc acatcatggt tgctttagga agttttttct
     1321 ttttactttt catcgttaca ctttatctta ctatggcaaa tgatattgag aaatttagaa
     1381 aagtactttg ggtgtgtttg ttatccattc cattgggtta tatcgccgct gaagcaggct
     1441 ggattgttgc tgaagtaggc agacaacctt gggcaattca agacttactt cccgtacata
     1501 tcgcagcaac acaacttgga aaagtcaatg ttcaaatttc attttggatt tttgcagtac
     1561 tttttacagc cttattgatt gcagaagtta aaatcatact tactcagatt aaaaaaggtt
     1621 ttgacgcaca tgcaggacat actccactta tgggcaaagg agaaaaataa tgttttttgg
     1681 tttagaactt gaaggtttgc aaatttattg gtggttgatt ttaagtttgc tcggcggact
     1741 tttggttttt atgttttttg tccaaggtgg acagacttta atcgatgagc ttagcaagga
     1801 tgagcttgaa aaaaccatgc tagtcaattc tttagggcgt aaatgggagc ttggttttac
     1861 aactctcgtg ctttttggcg gagcagcttt tgcagctttt ccactttttt atagtacaag
     1921 ttttggcgga gcttattggg cttggctttg tattttattt tgttttattt tacaagctgt
     1981 ggcttatgag tatcgtaaaa aagaaaataa tgtttatggc tctaaaacct atgaaatttt
     2041 tcttaaaatc aatggttatt taggtgtatt tttaatcgga gttgcagtaa gtagcttttt
     2101 tagcggttct gaatttatct taaatgagca taattttgtt tcttggcaaa accctttgca
     2161 cggcttagaa cttttactca atccttttaa ttatctctta ggcttagctt tagtattttt
     2221 agcaagactt ttaggcgcag cgtattttat gaacaatatc aatgatgaga atatcaaaat
     2281 aagagctatg aaaaaactta tgatcaatag tattttattt ttaccttttt tcttaggttt
     2341 tttagcgtgg atttttttaa aagatggttt tagcgtagat gccaatggag ttgtaagcat
     2401 gagtgcgaat ttgtatttat ataatttctt aaatcaaatg atttttgcta tcttgcttgc
     2461 tatcggtgtg attttagtgc ttttaggtat ggttcaagga gcaaaaggtt gctctaaagc
     2521 tatttttacc ctaggacttg gaacggtttt aacggttttt gctttattat caagcattgg
     2581 tttaggtcaa agtgcttttt acccatcttt aaatgatttg caaagttctt taactttaaa
     2641 aaatgcaagt tcaagctatt atactctaag cgtcatggct tatgtatctt tacttgtacc
     2701 ttttgtttta gcttatatta tctatgtttg gaatgcaatg gataaagtaa aaatcacacg
     2761 cgaagaaatc gcaaacgatg atcacgcata ttaaggagaa aaaatgttac atgctttgtt
     2821 tttattggct tggcctttag taatttatct aagctataaa tttataatgc taaatatcaa
     2881 tcaattagaa aaagatagca aactataaag caagataaga tttaaaccga tataagtata
     2941 aatcttttca aaatattgca atttgcccat ttttgagcat cttttaatca taaatctttt
     3001 aaagcttcat tggcagcatc aagggcgtga ataaggcttg tatcaaaaat tttgatattt
     3061 gtatcatttt tggatattaa taaaccaatt tcagtgcaag ctaaaagtac tccctttgcc
     3121 cctttttctt gtagtttatt tataatattt aaatattttt ctttagaatc ttgcttgatt
     3181 tcacctttgc aaagctcatt aaaaataata tcattaacga tttttatatc ttcatcacta
     3241 ggagtaataa cgctaatatt ttcttcaatc agtatttttt tataaaaatc ctgcgtcatt
     3301 gtgtatttag tacccaataa accaattttt tgtatgtttt cttgttttaa agccttagca
     3361 gaactttttg caatatgcaa aatagggata tttatatttt gttgaatttc atcaaaaacc
     3421 ttatgcatag tattagttgc aattattata aaattagccc ctgcaagttc taatttttta
     3481 gcacattgag tcaaaatttg tgcagcttct tgccatttat cttggctttg taaattttct
     3541 atttcttcaa aattaacact gtaaagtaaa atttttgcag aatttaaaga ttttaattta
     3601 tcatttatag cttgatttat tgttttataa taagtaatag tgctttcaaa actcattccg
     3661 cctataatac caatggtttt catttttctc cttaagaatt aatttttgag ttattttatt
     3721 acaatatatt tcatagaaat atgatttatt tttaaataaa taaatatatt ttaatatttt
     3781 tattaaaatt taaaataatt ttttaaacta ttttccaatc tataggaatt ttaccaactt
     3841 tttttaaaaa ttcattagcc tttgaaaaat gcttacaacc taaaaatcct gttctagcta
     3901 aagggcttgg gtgggctgct tttaaaatca aatgcttagc attatcaatc aaaatctcct
     3961 tgttttttgc gtaatttccc caaagcataa aaacaagccc tgatttttca ttgcttaatt
     4021 tatgtattat agcatcacta aattcttgcc aaccccacga actatggcta gctgctttat
     4081 ttgcttcaac gctaagaata gaatttaaga gcaaaactcc ttgttttgcc caagagctta
     4141 aatctccgct ttttgctggg gtgatgttta aatcattttg caattcttta aaaacattat
     4201 taagacttgg tgggattttt acattttttg gaaccgaaaa actaagcccc attgcttgat
     4261 ttggttgatg ataaggatct tgtcctagga taataatttt aatttctttt aaaggacata
     4321 aattaaaagc attaaagatt aaatttgcag gtggataaat aattatattt tgattaatcg
     4381 catttaggta ttgttttttg atttctagaa aatatttttt ttgaaattcg tctcttaaaa
     4441 attctttcca gtcatcattt attttaatct tatctatgtt tattgtaatt tcttccatat
     4501 tatccctaat tatttaaatt attaaaaatt ttattctaac aaaaaagctt gcaaaaatat
     4561 attaattttt tttgaagtaa ataaaatttt ttatattaat aaaaattaaa tataaagaca
     4621 taataggata taaaaatact taatttattg tatttgaaag tagttttatt gttaaccaat
     4681 tattaactaa aaatgcaata tcattatttt atgatttaaa tcaaaaattt ttgattttaa
     4741 attaaaatac ttttatgaaa ggttcaaaat gggaacaaga aaagaacatg attttattgg
     4801 ggaattagaa atctctgatg aggtttatta tggagtgcaa acttttagag ctgttgaaaa
     4861 ttttgatatt tctcatgata gattaaaaga ttttcctcgc tttgttagag ctttggctag
     4921 agtaaaaaaa gctgcagcta tggcaaatca tgaattaggt cttttagata aaaatatcca
     4981 agatgcgatt attaaagcgt gcgataaaat tttagaaggc gggtattatg atcaatttgt
     5041 agtagatatg atccaaggag gtgctggaac aagtacaaat atgaatgcta atgaagttat
     5101 agcgaacata ggacttgaac ttatgggtca taaaaaaggt gaataccaat atcttcatcc
     5161 aaatgatcat gttaatttaa gtcaaagtac taatgatgct tatcctacag ctttacacct
     5221 tgccttgcat gattatttaa gtgatttggc aaaagctatg gaacatctaa aaaaagctta
     5281 tgagagaaaa gctgaagaat ttaaagatgt tcttaaaatg ggtagaaccc aactgcaaga
     5341 tgctgtacct atgactttag gtcgtgaatt taaaactttt gctgtaatga taggcgaaga
     5401 tatacaaaga gtattggaag ctagaaaatt aattttagag atcaatttgg gtggaactgc
     5461 tattggaacg ggaattaatt ctcatcctga ttatccgaag gttgtagaaa gaaaaataag
     5521 agaagtgaca ggttttgaat atactgtggc tgaggatttg atcgaggcga ctcaagatac
     5581 gggagcttat gtacaaattt caggtgtttt aaaacgtgtt gcaacaaaac tttctaaagt
     5641 atgtaatgac ttaagacttt taagcagtgg tccaaaatgt ggtcttaatg agattaatct
     5701 tccaaaaatg caaccaggta gttctattat gccaggtaag gtaaatcctg ttattcctga
     5761 agtagttaat caagtttgtt attttgttat tggagcagat gtaactgtaa cttttgcttg
     5821 tgagggtgga caattacaac ttaatgtttt tgaaccagtt gcagcgtata gcttatttaa
     5881 ttctattgta atgctagaaa aagcaatgta tactttagct gataaatgta tagatggtat
     5941 tactgcaaat gaaaaaattt gttcagactt cgtctataat tcagtaggta tagtaacagc
     6001 tttaaatcct tatattggtt atgaaaattc agcttctata gctaaagagg caatgaatac
     6061 tggaaaaaga gtggctgata ttgcgcttga aagagggctt ttaagtaaag aacaaattga
     6121 tgaaatttta actccatcaa atatgctaaa tcctcacatg gaagctaaaa aatagcattt
     6181 taggatttaa tatggatata atgataattt tgcaagtaat cgtccttctt ggggcgattt
     6241 ttatcggtat tcgcctaggc ggtattgcta taggttatgc tggaggatta ggtgtagtta
     6301 tactaggact tgttttaggt atgaaacctg gtaatattcc ttgggatgtt attttaatta
     6361 ttgctgcagc tattgcagca atttctgcta tgcaacaagc aggtggactt gattatatgg
     6421 taagggtgac agaaaaaatt ttaagatcaa gccctaaatt tataaattat ttagctccag
     6481 cttgtggatg gttgcttaca atcttagcag gaacaggaaa tgcagtattt tctttaatgc
     6541 ctgttgtagt tgatgttgca aaatctcaaa atataaaacc tagtgttcca ctttcattaa
     6601 tggttgtttc ttcgcaaatt ggaatcactg cttctcctgt gagtgcagct gtggtttata
     6661 tgagtggcgt tttagagcca cttggatgga attatccaac tttaattgga atttggatca
     6721 gtacaacttt tatagcttgt atgcttacag cttttatagt gagtttaatc actcctatgg
     6781 atttaagcaa agatagcgtt tatcaagaac gcttaaaagc aggacttgtt aaagatgcag
     6841 gagctatttt acatggtgaa gataaaccag gtgctaaact ttcagtagga attttcttga
     6901 tcactgtttt ggcagttgta ctttatgcaa ccgcaatttc aagcaatatt aaatggattg
     6961 atcctgttgt ggttccaaga gatgcagcta ttatgagctt tttacttact gcagcaactt
     7021 tgatcacttg gctttgtaaa gttgaaccag gtaaaattct tgataccagc gtatttaaaa
     7081 gtggtatgac tgcttgtgtt tgtgtttttg gtgtagcatg gcttggaaat acttttgttg
     7141 caggacacga agcttctatt aaagaagtag caggcgactg ggttaaacaa acccctgcta
     7201 tgttagcagt tgcatttttc tttgcaagca tgcttttata ttctcaagca gcaaccgcaa
     7261 aggccattgt acctgtaatt atcactgctt taggaatttc agcagcaaat ccgcatgatt
     7321 cttatatgct tgtagcttgt tttgcagcag tttcggcact ttttgtgctt ccaacttatc
     7381 caaccttact cggtgctgtg caaatggatg atacaggaac gactagaatt ggtaaattta
     7441 tatttaatca ctctttcttt ataccaggag ttttagctat tgcaattgct gtagcattag
     7501 gctttgtatt agctcctatg cttatttaaa tcaaacccta ggtttttctc tcctagggtt
     7561 aaaatttttt cattagtttt taagtatata ctacgctata atattcattt ttaattttct
     7621 ttaagaaagg aatttaatga agataaaagt tgggttgatt ttttcaggta ttgtttgcct
     7681 ttttttaaca gcttgtgtta atcaggttaa acaaaataca acatttgaaa atgctttaac
     7741 acaaaaatat tgtggtgatg attttttcaa tcaaaattta gaaaaaatta aaaaaaatga
     7801 tgatgtcatt tatacaggat taaatgcagg tttgattgct agaaattgtg gtgattttaa
     7861 caaaagtaat gtattttttg atgctgcgga agaatcttat aaatatgatg tggatttaga
     7921 aaatgtaggc tctaaagcag ctaaatttgt tggtacaacc ttgcttaatg atactatagt
     7981 tgattatgat ggttctttat atgaaagaat tatggttaat atatataaag ctctaaacta
     8041 tatggaagaa gatgattatg aaaatgcaag agttgagttt aatcgtgctt taatgcgtca
     8101 agataaggca aaagaatatt ttgctaaaga aattgagaaa aatcgtgctg atttagataa
     8161 ggcaaaagaa gataaaaatt atgataaaaa tatgaatgaa aactcaaaag ttatagaagc
     8221 acaatacgat aacttgttta aagagtttga tacaacaaaa aatttcataa atccttatgc
     8281 gacttatctt gcttcaatat ttttctttat ggataaagat tatagaaaag ctgcagattt
     8341 attgagagaa gtagctatta tttatccaaa aaataaaact atcaaaaaag aggctaaaat
     8401 ttttaaagaa tatgccacaa aaataaaagt caaaaaagct aaaaaatatg tttttgtagt
     8461 ttatgaaaat ggatttggtg tagttaagga tgaatttgct ttaaccttac cttttatagt
     8521 ggataaaaaa attattagca caaatattgc tttacaaacc ttgaaaaaaa gggaagcttc
     8581 ttttgcaaat ttaaatataa atggtcaaaa tacaaatgat tttgtagatt tagacaatat
     8641 tgttgctact gaatttaaaa taaatatgcc tgcaatgatt gctaaagcct tagctcaaac
     8701 tataattaaa accactttaa atgtagctgt tgcaaataat gactctacag gtggatggct
     8761 aagtcttgca acagcagtag caactgctgc aaccaacaaa gctgatgtgc gttcttggag
     8821 aggtttgcca aaaagtattg ccatagcaac aatagaaaac gacggaaatt tagaaatcaa
     8881 agatccacaa ggcaatattt tgtttcaaaa atcattggat aaaaataaaa atgctcttgt
     8941 tgtagtgcgt tcttttgctc cgtatttacc tgcaagtgtt gctatcatgg aaaaataagg
     9001 ctaaaagatg aaaaaaaata ttttatttat tttaatgttt ttacttagtg cttgtgcgcc
     9061 aagttatcaa ataaattcaa atcaaaatac tgtaatttta ggttcaaatt taccaaaaag
     9121 tttagtaaaa cagtttcaaa agcgtataaa tagcaatggt tatttagaat ttgaagtgat
     9181 tttacgcagt acttttgcta aagatttaat ttataaagtg gattggttag ataaagatgg
     9241 ttttgtgcta agagatgttt taaatgagga ctatcaagcc cttagaattc cagcaggaca
     9301 agaggtgatt cttcgtaaac ttgcatctga tacaagagcg aaggatttta gattagaaat
     9361 taaagcaaaa aattaatctc attttaggaa ggataaatca tgaaaaaaac aaaaatttta
     9421 ggaacagctc ttattggagc tttgcttttt agtggttgtg cgcaaacagc ttatacagat
     9481 ggaaaggcaa gtcaagtgaa aaaaggcgat gctttaacct tgggtcttga tagacaagat
     9541 tttgaaagtg cagctgaaac tatgataaat agtatgttaa gcgatcctgc ttttgcaaat
     9601 attaaaccag gtacaagaaa ggttattgct attggtaggg ttgtgaatga taccccgcaa
     9661 agaatcgata ctgaaaaact taccgcaaaa atcacttctg cattaagaaa atcaggtaaa
     9721 tttgttctaa cttcagcagt tgctgcaggc ggagcacttg atagcatgag tgaagatgta
     9781 agagaattaa gagataatga tgagtttaat caaaaaacca tagcaaaaaa agggacattg
     9841 gtatcgcctg atttttctct tgcgggtaaa attagacaag ataatgtaaa acttagtaat
     9901 ggtaaaactc aagtagaata ctttttcttg ttaagactta ctgatctaac atcaggttta
     9961 gtttattggg aagatgagca aactattgat aaaaccggtt ctagtaaatc agttacttgg
    10021 taaaataaaa attaatttat gaataaaatt tttagctcaa gtgtttagct tgagcttttt
    10081 ttatgatttt taaaaggata tgaaatgaaa aaaatattat ttatcggctc tttagttatg
    10141 gcaagtttac tttatgcaca aggttcccag cctgtagaaa ttacacaaca agatataaat
    10201 actcaaaatg aaatgtctga tgcaagcact aaggatatta ccccaaaatc aattgaagat
    10261 ttttttgaag aatttgcgga taatttcggt atagaatatg gtataaccaa agatggaaaa
    10321 actttttata caggaaaaag tactgttgct gtaaatgata ctgatccaca atttgcacaa
    10381 gctttacaaa atgcttatca aaaagcaatg ttaaatttac aaagcgaatt tataagagat
    10441 gcttttggaa gaattgctac aagcaagatt caaaattatg aagcagataa ttctactaat
    10501 gctaaggaat ttgatgaatt gccaaaaggt gataaggttg atcaaatttt aaataaactt
    10561 acacaattag ctggtgctca gcttgataag gcattaaaag atttaggtat agatacaaat
    10621 tctttaagcg aagacagaaa aaagacttta ttaaagcaag aatttcttaa taaaaccatg
    10681 acaaatgcca taggttctat gagtggactt gttcctgtgc aaactatagt tacacaaaga
    10741 agaggtgagt atgatgtagg tgttattgct gttatttcca ataaaactcg ccaattagca
    10801 aaagatatgg cactagcaag acagagtgct attaagggta aaggcaaggc aataagtgag
    10861 tatctgccaa aagatacaaa aggcttttta aatgaatatg gaattcgctt agtttatgat
    10921 gaaaatggtg cgcctattat tttaagttat ggaaactggg gttatgtagc agatcctagc
    10981 aatgctaaaa aaacaaatat tttagaagat agagccaaag aaacagcact tactatggct
    11041 gatgctgcta ttatagagtt tattaataca aatttaagtc ttaaagatga aagaacaact
    11101 ggtgatactt acgaggaaat catcaaacaa agtattaatg ttaatgatag ttccactcaa
    11161 gaacaaactc aaaacataac aaatattatt gataaagtaa atagtaaaat aaaagcaagc
    11221 gcaagcggta aaattcgtgg tattcgtact cttaaaaaat ggagttatac aagtgaaaat
    11281 ggtattgaac atgtaggagc tgtgagattt tattcttatg aaaatttagc taacacaaat
    11341 gaggctttaa attcaaagtc aaatacaaca aaaaatgaag ctaaaaaatc ttctagcata
    11401 caaagaagct ctaatgttgt aaatagcatg gatgattttt aaaggtaaaa gatgaaaata
    11461 attaaaattc tttttttagg cttattttta agcctaagtc ttaatgctaa agttataacc
    11521 acaacttcaa caaaatcaag cacaggcgaa ggcacaggct tgactaggga agatgcgata
    11581 aacaatgcca ttatagaagc tataggaaaa atgagcggag taagcatcaa ttctcttaag
    11641 aaatctaaca ctagtgtttc aactgataat tcaggttcaa acatacaaga taattacagc
    11701 gagcaaattt caaaagccac caaaggtaga gccgatactt atgaaatcaa tagtgttgaa
    11761 caagatgcaa atggtaaata tacagccaat gtaacgattt ttaaaaccac aacaacaaaa
    11821 aagtatcaag ctccaggttt aagtgcagat aatagaagaa gtattactgt ttttgattct
    11881 actccagatg ctgcaaaaag aggtataggc tcagctttgc aacaaaaaat catttccgat
    11941 ttattgcaaa gtcgtaaatt taatgtttta gaccgtgatt ctagtggcta ttatgaaatg
    12001 gaaaaagctt taatcaaaag tggcgacgca gctagcgatg aagtttataa acttaaaaat
    12061 gtgttagcaa cagattatat tttattgttt tctatttcag gacttgaagg taaacaaaaa
    12121 acaagcaatt taacaggaaa aagcaaaact gaaattgaag ttatcgtaga ttatcgtgtg
    12181 cttttatttg ctacaagaca aattaaattt tctaatactt taagtatgaa agtcaatctt
    12241 aaagacaata gtcttagtgc caatgaagct gcactcaaac aaattgcaaa tcgtattgca
    12301 ggagatattt taaatgcaat ttatcctttg aaagttgcaa gcgttgaaaa caatgaagta
    12361 gtattttctc aaagcttaaa tcaaggtgat gtttatgaat gttttgctct tggcaaggct
    12421 ataaaagata cttatacaaa agaaaatata ggaagagtag aaaacaaaac aggaagtatt
    12481 gaaatcactc gcacaagccc taaactttct tatgcaaaaa tcacagaagg tggtgtaaaa
    12541 gtgggcgata tttgtagacc tttaattggt agcaatagtg gaaatggcta cactataggt
    12601 cgtgatgcaa attatcaaac cgaagaaggt ggcggagtaa atctgggatt ttaaattttt
    12661 agagtttgat ttttctcaaa ctctaaatcc tttcttaaat tcatcaaaaa ttaaagaaaa
    12721 attttgtaaa atcgaaattt tattaaacca ctaaagcttt taaatccgtt attgcggtgc
    12781 tttatggtac taccaattta taaggaaaag caatgtatgc tattatcaaa cacagcggaa
    12841 agcaatacaa agtaagtgtt ggcgatgagc taaaactaga tcactttgaa gctgaaagca
    12901 aagcaagtat tgaagtaagc gaagttcttg ctatcaatga taaagaatta aaggtaggtg
    12961 cgcctttcgt agcaggtgca aaagttgttt tggaagtgat caatcacgga aaagataaaa
    13021 aagttgtgat ttacaaaaaa agacgcagaa aagattctaa actcaaacgc ggttttagaa
    13081 gacaatttac tcgcgttgta gtaaaagata tcaaagctta aggagtaaag aatggcacac
    13141 aagaaaggtc aaggttcaac tcaaaataac cgcgattcta taggtcgtcg tttaggtgtt
    13201 aaaaaatttg gtggcgagtt tgttagagct ggaaatatca tcatccgcca aagaggaact
    13261 gcaactcatg caggtaacaa tgtaggtatg gggaaagatc atactatctt tgctttgatt
    13321 gatggttttg taaaattcga aagaaaagat aaagatagaa aaaaagtttc tgtataccct
    13381 gcataagttt ttaggacgct tttttagcgt cttgaaaact ttaaatttat aaatttaact
    13441 tctttttatt tgctcaaatt tagctttata aatttaaagt caaaggcaat ttaaatgttt
    13501 attgatagtg ttaaaattac tttagcttca ggcgatggtg gtaaaggtgc tgtaagtttt
    13561 cgtcgtgaaa aacatgttcc acttggtggc cctgatgggg gagatggtgg aaatggtggc
    13621 gatattattt tcgtatgtga taataatacc cacactcttg taaatttcaa aggcaaaaga
    13681 gaattacgcg cacaaaatgg tgctggtgga atgggacgca ataaaaatgg caaaaaaggt
    13741 gaaaatttag aacttatagt acccgaagga acgcaagtta tcgatgcaca aactaatgaa
    13801 attttactcg atcttaccaa agaaggacaa agagagcttt ttttaaaagg tggaaaaggc
    13861 ggacttggca acactcattt taaacacgcc accaatcaac gccccgatta cgcacaacct
    13921 ggtataaaag gagaaagtcg cttagtcaga cttgaactta aacttattgc cgatgtaggg
    13981 cttgtaggtt ttccaaatgt aggaaaatct actcttataa gcattgtttc aaatgcaaaa
    14041 cctgaaattg caaattatga atttactacc cttactccaa aacttggact cgtggatgta
    14101 gatgagtata attcctttgt tatggctgat attccaggga ttatcgaagg agcaagtggg
    14161 ggtaaaggct taggacttgc ctttttaaag cacatagaaa gaacgagctt tttacttttc
    14221 gtgctagatc ctatgaggca aatgccttta aaagaacaat ttatagtact aagaaaagaa
    14281 cttgaaaaat tttccaatga actttttggg cgtaaatttg gtatcatgat ttcaaaaagt
    14341 gatagtgtta atttaggaga agaatttgcc gagcaaatta ctttaaacat taatgagtta
    14401 gaaaattatc tcaaagaaat aaataaccca caaagctttt taatcaaagt ctcaagcctt
    14461 gaaaaaacag gacttaaaga acttaaattc atgcttttag aagaaattaa aactttaaga
    14521 aataacaaat aaaaatttta acaatctagg aagtgtttta tattaaaaat ttcaaacact
    14581 ccctattttt tcaaaaaata actagtttat atgaaatttt ggctaaaatt ataaaaattt
    14641 tttaaggaat aagcatgaaa agaatagttg ttaaagtggg ttctcatgtg attagcgaag
    14701 aaaacacttt aagttttgag cgtcttaaaa atttagtcgc atttttagct aaactcatgg
    14761 aaaaatatga agtgatttta gtaacttcag cggctatttc agcaggacac accaaactag
    14821 atatcgatag aaaaaacctc attaataaac aagttttagc cgctattgga caaccttttt
    14881 taatcagtgt ttataatgaa cttttagcca aatttaacaa actaggcgga caaattttac
    14941 ttacaggtaa ggattttgac tctagaaaag ctactaaaca cgcaaaaaat gctatcgata
    15001 tgatgataaa tttaggaatt ttacctatca tcaatgaaaa tgacgctaca gctatagaag
    15061 aaattgtctt tggtgataat gatagcttaa gtgcttatgc tacgcatttt tttgatgcgg
    15121 atttgcttgt gattttaagc gatattgatg gattttatga taaaaatcct agtgaattta
    15181 gtgatgcaaa gcgtttagaa aaaatcactc atattaaaga agaatggcta caagcaacca
    15241 taaaaacagg tagtgagcac ggaacaggtg gtatagtaac caaacttaaa gcagctaaat
    15301 ttttacttga acacaataaa aaaatgtttt tagcaagtgg ctttgattta agtgtggcaa
    15361 agacattttt attagaagat aagcaaatag gtggaacttt gtttgagtga ttaatttatt
    15421 aaattctctt ttaaaatcaa ataagttata attaaaactt ttaatttcac acaaagcgaa
    15481 aaaatgaaaa aaattatttt tatgggtact ccatcttatg caacttgtat tttaaaagca
    15541 ctagtagaaa atgaaaattt taaactcgta gcacttttta cccagcctga taaagccgta
    15601 ggtagaaagc aaattttaac tccaagtgat actaaggctt ttttaagtca aaattatcct
    15661 agtattccta tttttactcc aagttcttta aaagatgaaa atattataag agagattaag
    15721 gatttaaatc ctgattttat cgtggttgct gcctatggaa aaattttacc taaagccatt
    15781 ttggatttag caccttgtgt gaatttgcac gcttctttac ttccaaaata ccgtggtgcc
    15841 agtccgattc aaagtgcgat tttaaataaa gatgaaaaaa gtggagtttg caccatgctt
    15901 atggaagaag ggcttgatac aggtgctgta cttgaaagct tagagtgtga tataaaagat
    15961 aaaaattcaa gtgaagtttt tgaactttta gcaaatttgg ccgctaagct catcctctct
    16021 actcttttaa attttgataa aattatccct aaaaaacaag aggaaagtct agcaacgctt
    16081 tgtagaaaaa tcaaaaaaga agatgggctt ataaatttgc aaaatgcaag agaactttat
    16141 caaaaatatc tagcttttac cccttggcct ggagttttct tggaaaatgg acttaaattc
    16201 ttagagcttg aacttgtgga tgaattaaaa caaaatgcta ggatgggtga aattttagaa
    16261 ttagaaaaag aaagtttttt gcttgcttgc aaacaaggag ttttgcgtat taaaaaactt
    16321 caagaaagtg gaaaaaaagc tcttgatggt aggacttatt taaatggaaa aaggcttaaa
    16381 agtgaagata gtttgtgttg aaagtataga ctcaactcat ctttttttat gcgagcaaat
    16441 acgcaatgga aagattgatg gaaattttgc tatttatgct ttagaacaaa caaatggagt
    16501 tggaagtagg gaaaattctt ggcaaagctc taaaggaaat ttacatcttt ctttttgtat
    16561 taaagaagaa gatttgccaa aagatttgcc tttggcttct gtaagtattt attttgctta
    16621 tttacttaaa gaacttttac aagaaaaagg ttctaaaatt tggcttaaat ggcctaatga
    16681 tttatattta gatgataaaa aagctggagg ggttataagt gctaaaattt caaattttat
    16741 cataggcggt atgggtttaa atctgaaatt ttcaccccaa aatacagctt tatgtgatat
    16801 agaaatttcg cttaaagatt tagtgagtga gtttttgcaa aaagtagaaa aaaaaatttt
    16861 atggaagaat atttttagca agtatatgtt agaatttgaa aaatcaagaa aatttagcgt
    16921 ccatcatgaa ggtaaagttt tttcacttga aaattctttt ttgtatgaag atggttcaat
    16981 tttactaggt gataaaaggg tgtatagttt aagatgagcg aaattattac aatagcaaat
    17041 caaaaaggtg gagtaggaaa gactacaaca gcagtaaatt tagccgcttc tttagctgtg
    17101 gctgaaaaaa aagtactttt gattgatgtt gatccgcaag ctaatgcgac tacaggactt
    17161 ggttttaatc gtaataatta tgagtataat atttaccatg tttttatagg aagaaaaaag
    17221 ctttcagata ttattttaaa aacagaattg ccacaacttc atttagctcc ttcaaatata
    17281 ggtcttgtag gtatagaaca agagcttgct aaaggtgaaa ataatgagaa aaaaatgctg
    17341 cttaaaaatc aaattcaaga agtgattgat gaatatgatt ttattattat tgattctccg
    17401 cctgctcttg gaagtattac tataaatgct tttgcagcaa gtgatagtgt aattatccct
    17461 atacagtgtg aattttatgc gctcgagggt gtagctatgg ttttaaatac aattaaaatt
    17521 atcaaaaaaa ctattaattc taaactcagg gttcgtggat ttttaccgac aatgtatagc
    17581 tctcaaaata atctttctaa agatgttgta gatgatttga aacaaaattt taaaaaacaa
    17641 ctttttacta ttaatggaaa cgaagatgac tttattgtga tccctcgcaa tgtaaaactt
    17701 gcagaaagtc caagttttgg aaagcctata attctttatg atattaaatc gccaggttct
    17761 gttgcttatc aaaatttggc gtattctata ttaggataat tataatgggg ttaaataaag
    17821 ataggggttt aagtagttta atcagtgata tggatactgt ttatagtaaa gaattgggtt
    17881 ttgataaaaa tcaaagcact atgatagaaa ttgatcaaat ttcacccaat ccatttcagc
    17941 caagaaagaa ttttgatcaa gaagctttag atgaacttgc taattctatc aaagaatttg
    18001 gacttattca gcctattatt gtatttaaaa aaaataataa atttatttta attgctgggg
    18061 aacgtcgctt aagagcagtg aaagcattag gaaaaaaaga aattctagct tttattgctg
    18121 atattgatga gaataagctt agagaattgg ctcttattga aaatatacaa agagagaatt
    18181 taaaccctat tgagcttgct aattcttata aggatttaat gcaagttcat aaaattactc
    18241 aagagaattt agcagaactt attcataagt ctcgtactca aataacaaat actttaagac
    18301 ttctgaattt agatattaga actcaagagt tgattgcttc tggaaaaatt tctcagggtc
    18361 atgctaaagt tttggttggt ttagatcaaa aagatgaaaa aatgttggtt gatagcataa
    18421 taggtcaaaa acttaatgtt agagatactg aaaaaatagt taaaaaaata aaaaataatg
    18481 aaagcttacc taatcaagaa tttgaagatg aaataaaaaa attaaaacaa atactaaatc
    18541 gctttggatt tgactgcaaa aataaaaata atgattttgt aattcattta gaaaatattg
    18601 ataaaattaa aaaattaatc aaaatgcttg aaaagcttta accaaaatct tagctttttt
    18661 atggtaaaat agtccttcga aaattctaac caaggagaat tatgtttgaa gatatgcatc
    18721 cttccataat gcttgctact atggctattt ttttagctat gatagttatt ttaaatagta
    18781 tgctgtataa gccgctttta aaatttatgg atgaaagaaa tgattctata aaaaatgatg
    18841 agaataaagt aaaagaaaat tctcaagaag ttttaggtgt gaatgatgaa ttagaagcta
    18901 ttcatattaa cactagagaa gaaattcaaa aaattaaaca aagtgctata gctgctgcta
    18961 aagaagaggc agagcaaatt cttagaagca agaaagaaga attagaaaga aaaatggcca
    19021 gtttttatgc agatttagcc gttcaaaaaa aagagttgca agaacattta aacatacatt
    19081 tacctgagct taagcaagct ttgcaaaata acataaagaa aatttaagag gagagaaatg
    19141 agtaagttat tctttattat atttttgcta cctttatatg cttttggtgc atcaaatggt
    19201 agtggagaat atgatattat tccaaggact attaattttc taatttttgt ggctatattg
    19261 tattattttg ttgcaactcc atttaaaaat ttttacaaaa accgtattgt aaaaatttct
    19321 tctaaacttg atgaaattca aaaaaaactt ttagaaagta aagctaagaa attagacacg
    19381 atgaaaaaac ttgaagaagc taaggcaagt gctgctgccg ctttaattac agcaaaaaaa
    19441 gaagctgaaa ttttagttca aaatattaag aaagagactc aagatgagtt agatttactt
    19501 caaaaacatt ttgaggaaca aaaagattat gaatttagaa aaatggaaaa agaattagta
    19561 tcaaatactt taaatgaaat tttttctgat ccaaatatga cattaaaaca gagtgaaata
    19621 atagaactta tgatgaagaa ggtatcttaa atatggaaaa tataattgca agaagatatg
    19681 caaaagcgat agcttcaaga gctgatataa atgattttta tcagaatttg tgtattttaa
    19741 attctgcttt tgttttgcca aaatttaaaa atattataga atctaatgag a
//
LOCUS       DARBAC010000020        19718 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.020, whole genome shotgun sequence.
ACCESSION   DARBAC010000020 DARBAC010000000
VERSION     DARBAC010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19718
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.020"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..543
                     /locus_tag="SB799_000525"
     CDS             <1..543
                     /locus_tag="SB799_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEG0867785.1"
                     /translation="LFELAGKVEFMFDKPVYKDDVKALLAEFFNYMKDHFNDEEKYMK
                     LIGYPDLEEHKRIHKEIIQSMIDLIKNIKSTNDLKEKLYTVSKKWLLEHILYEDMKVE
                     QYRRSSLASEDDGEVSFEEVKEEKDDENAVYLYTCECVGQMHDVPFGIHQKIQLKGVK
                     FKCKKCKEAIQFYKKYSENF"
     gene            604..789
                     /locus_tag="SB799_000526"
     CDS             604..789
                     /locus_tag="SB799_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867786.1"
                     /translation="MDKKIKYFILDKFDYSYPILTKDTKCSFCENFFPIEYSSNLKTI
                     EKECPFCNNKMDIKLKD"
     gene            complement(786..1817)
                     /locus_tag="SB799_000527"
     CDS             complement(786..1817)
                     /locus_tag="SB799_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HEG0867787.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(1896..2792)
                     /gene="sppA"
                     /locus_tag="SB799_000528"
     CDS             complement(1896..2792)
                     /gene="sppA"
                     /locus_tag="SB799_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEG0867788.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILMPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVVDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            complement(2780..4009)
                     /locus_tag="SB799_000529"
     CDS             complement(2780..4009)
                     /locus_tag="SB799_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEG0867789.1"
                     /translation="MFIAAARYLFLCDEDFTILENQAFVFEDKILELGELDNLRKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASQKGIRVVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAYFALDLAKKQNLLVSTHFLESK
                     AENIWLRESKGGFKKWLENFTLHPKPLYAPKDFAKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMATLYPARALNLNLGELKKGKIADFSVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            4100..4579
                     /gene="aroQ"
                     /locus_tag="SB799_000530"
     CDS             4100..4579
                     /gene="aroQ"
                     /locus_tag="SB799_000530"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEG0867790.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            4582..5055
                     /gene="folK"
                     /locus_tag="SB799_000531"
     CDS             4582..5055
                     /gene="folK"
                     /locus_tag="SB799_000531"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEG0867791.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
     gene            5065..6519
                     /gene="flhF"
                     /locus_tag="SB799_000532"
     CDS             5065..6519
                     /gene="flhF"
                     /locus_tag="SB799_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HEG0867792.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLTKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSF
                     FSTGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            6512..7378
                     /gene="flhG"
                     /locus_tag="SB799_000533"
     CDS             6512..7378
                     /gene="flhG"
                     /locus_tag="SB799_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HEG0867793.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDELKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            7397..7753
                     /locus_tag="SB799_000534"
     CDS             7397..7753
                     /locus_tag="SB799_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867794.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNESKERRRNAKRAA"
     gene            7734..8426
                     /locus_tag="SB799_000535"
     CDS             7734..8426
                     /locus_tag="SB799_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HEG0867795.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNNNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLENECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            8426..9505
                     /gene="fliM"
                     /locus_tag="SB799_000536"
     CDS             8426..9505
                     /gene="fliM"
                     /locus_tag="SB799_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEG0867796.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            9502..10344
                     /gene="fliY"
                     /locus_tag="SB799_000537"
     CDS             9502..10344
                     /gene="fliY"
                     /locus_tag="SB799_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HEG0867797.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNASDTLKAP
                     LVYAIFDIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNAEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            10413..11018
                     /locus_tag="SB799_000538"
     CDS             10413..11018
                     /locus_tag="SB799_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEG0867798.1"
                     /translation="MDTKIIKDVEKFENIPDLEKAITFFGSARLKEDNFYYQQAKILA
                     QKCAQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            11018..12034
                     /gene="mnmA"
                     /locus_tag="SB799_000539"
     CDS             11018..12034
                     /gene="mnmA"
                     /locus_tag="SB799_000539"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEG0867799.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQKDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFKLKNINLFI
                     DAKELDCEVKIRYRSKSTPCKVEIYEDKSAKITLKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(12062..12388)
                     /locus_tag="SB799_000540"
     CDS             complement(12062..12388)
                     /locus_tag="SB799_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002923175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0867800.1"
                     /translation="MIFLSLAFLYTHYFFASITAHISAMFFVFYSAGLALGAPPLLYA
                     FIMIASGNVMMALTHYATGTAPVIFGTGYVTLKKWWSIGFVISIVDIVVMIAVGLFWW
                     KILGFY"
     gene            complement(12431..12694)
                     /locus_tag="SB799_000541"
     CDS             complement(12431..12694)
                     /locus_tag="SB799_000541"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0867801.1"
                     /translation="MKKSCSVFLSRFYFYGLELWACFFGISLDATSVALLGLSLVLIS
                     GVLTFGEVLAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA"
     gene            complement(12609..12824)
                     /locus_tag="SB799_000542"
     CDS             complement(12609..12824)
                     /locus_tag="SB799_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0867802.1"
                     /translation="MFITATAPNPLVLYFLSPLEIKSTPNASTFAKDKLKELVKMKNS
                     EKIMLSVFVSLLLLWAGALGLFFWNFS"
     gene            complement(12767..13111)
                     /locus_tag="SB799_000543"
     CDS             complement(12767..13111)
                     /locus_tag="SB799_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0867803.1"
                     /translation="MARGVIKTGLGEHLAYHFISILGKKTLGIAYFIAFCETILAPVT
                     PSNTARAGAIINSIVQVIARSFKSTPEDGTQNKIGTYLSLVNYQEPILFHQLCLLQLQ
                     LQILWCFIFSLR"
     gene            complement(13334..13483)
                     /locus_tag="SB799_000544"
     CDS             complement(13334..13483)
                     /locus_tag="SB799_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEG0867804.1"
                     /translation="MENNSWHFLGLFIAVIMAVILQVMPLGAVCMIAIAIVALSGITT
                     TQLKI"
     gene            complement(13706..13803)
                     /gene="ffs"
                     /locus_tag="SB799_000545"
     ncRNA           complement(13706..13803)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="SB799_000545"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            13986..14750
                     /locus_tag="SB799_000546"
     CDS             13986..14750
                     /locus_tag="SB799_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEG0867805.1"
                     /translation="MKVKWSRDFSIKNMQLDKQHELIFEITNLANDLALKIQENNTQY
                     KDDLKQILAKLFQYIKIHFKDEEKFMESIDFPLIEEHKKSHQILVEKTKELLEHSDNI
                     VKMSQELSILTKDWILDHFANEDLWIANFTKKTLHLQEIHYTLEQYIKLKSIKQDLRA
                     EKTHDYICNCSLRIHAVPQTIHQELVSKENTLKCEKCGQILVHLDYFDLNQNFEKFNA
                     IFEDALQNHHFTTQKNDMGGGIDEFSSKNLRNFQSF"
     gene            14707..16578
                     /locus_tag="SB799_000547"
     CDS             14707..16578
                     /locus_tag="SB799_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEG0867806.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNIDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPNAIEMKFSNLY
                     HDIIKKYNHLSISYKKFIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYPN
                     TNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS"
     gene            complement(16582..18219)
                     /locus_tag="SB799_000548"
     CDS             complement(16582..18219)
                     /locus_tag="SB799_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEG0867807.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSGAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKEGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(18223..19107)
                     /locus_tag="SB799_000549"
     CDS             complement(18223..19107)
                     /locus_tag="SB799_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HEG0867808.1"
                     /translation="MISSSDWNLNTAATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            complement(19161..>19718)
                     /locus_tag="SB799_000550"
     CDS             complement(19161..>19718)
                     /locus_tag="SB799_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0867809.1"
                     /translation="ENNANFNNNTTNKETFTQEQTKTHSENVDKNSLDELNSLVKDLN
                     KVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSITLNPNNLGEVEVTLIQRGN
                     NLHINFNSNANAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQGKNRSGY
                     GFKDALDGKNESEKVNLELVLAKYF"
BASE COUNT         7303 a         3121 c         2998 g         6296 t
ORIGIN      
        1 ctttttgaac ttgcaggtaa agtagagttt atgtttgata aacctgttta caaggatgat
       61 gtaaaagctt tattggctga attttttaac tacatgaaag atcattttaa tgatgaagaa
      121 aaatatatga aacttatagg atatcctgat ttagaagaac ataaaagaat tcataaagaa
      181 atcattcaat ccatgataga tcttattaaa aatataaagt ccactaatga tttaaaagag
      241 aagctttaca cagtttctaa aaaatggctt ttagaacata tactctatga agatatgaaa
      301 gttgaacaat acagaagatc ttctttagct tctgaagatg atggggaagt aagctttgaa
      361 gaagtcaaag aagaaaaaga tgatgaaaat gcagtttatc tttatacatg tgaatgcgta
      421 ggacaaatgc atgatgtacc ttttggaatt catcaaaaaa ttcaacttaa gggtgtaaaa
      481 tttaaatgta aaaaatgtaa agaagccata cagttttata aaaaatattc agaaaatttc
      541 taattaacta tttatgcgtt aaaataataa ataaagtata agttagacaa agaaggaaat
      601 ttaatggata aaaaaataaa atattttatt ttggataaat ttgactattc ctatcctata
      661 ctaaccaaag atacaaaatg ctcattttgt gaaaattttt tcccgataga atatagctca
      721 aacttaaaaa caatagaaaa agaatgtcca ttttgcaata ataaaatgga cattaaactt
      781 aaagactaag ccttagtttt acttacaata ttaataatat ttgaagctac ttcatcagca
      841 agttctaaat gggaagtaaa gcctacacaa gaacaattaa tctcgcctaa aacatattta
      901 tcattgccct tttcatcagt atctaaaata aaatcagccg tccaaatcaa tggtaagtcg
      961 taattgccta atttttccct taccttagga agctcgccta aaaacatatc caccaaagtt
     1021 ttccaatctt ctggcttatc atagcgatat tttgccccac taaaaagcgt agcagaaaaa
     1081 gcatcagcat cttcagctgg ttttttatgc actacattta caggggtgtt ataaagcatt
     1141 aaaagtctga tttcaccttc tttaatgcgc ggtaaaaaag tcatatccac aagcatacca
     1201 ttatcaccta tgatatattg ctcacaaaaa tccataaatt ctccaagttc tctatgttct
     1261 acatgattat ccttagcttc tgtgcatttg atttttgtgt ttaaaggcaa actatctcca
     1321 ctaacattac cctctacact cacacgccaa attccctctc ctgtagagcc acgattttgt
     1381 tttaaaaccc tttcaccttt agccaaactt tttggaaaat tttctttaaa agtcttaata
     1441 tcatagtaag cataagtatc gcttggaaca agatcagtat ctgctaattt tgtaagcgca
     1501 tctttagcgc cataacctat catagcatca ggatgaggca tacctacaag cttatcggca
     1561 caaagttttc ttaacatatc aaaatactca ttttcttctt taagattgcc aggattgatg
     1621 cgagaaacat aaccatcaaa attttctttt acatatttgt aaatttcatc ttttttaccc
     1681 acttcaaaaa aaatcacctc agcattccaa cccttagctt ttaaggcatt taccataggc
     1741 atagtatctt ttctataacc atcttcacct ttatcactcc cacctttaac ttcgaaaaaa
     1801 acaatatttt ttttcattat tttactcctt atctaagata taaataatta ttgcataaaa
     1861 atattacaaa aattaaataa aaatatttat atattttatc tagcgtttat aaaactgcta
     1921 ttagtcttat aagcgatttc gattaagctt ttacttatca agcttgatgt ttgtccttct
     1981 aggcgattaa gaaatttatc aatcttatct tcttctttcc aaacaggatt tgaaacatta
     2041 gcaagttttt caagctcctt tttagcattt tcataattac taagctcatc tataagacca
     2101 agctccttag ctttggcagc taaaaacact cttgcatttg cccattgatc ttttttatta
     2161 agatctaatg ctctttcctt ggcaacaaaa cctgtaaaaa gatcataact ttgatcaatt
     2221 aaaccctgta aaaaatttct ttcattctca ttccaagctc ttgcaaaagt tccagcactt
     2281 ttaaattcac ctgcttgaat agtttgttct ttaataccga gtttattagc caatccgctt
     2341 aaatcagctc cttgcataat cacaccgata gagcctataa aacttgctgg attggctaaa
     2401 attttattag ctccaactcc tgctaaataa cttccgcttg ccatagttcc gcttgcataa
     2461 acaagcacag gctttttaat ttttaaatcc tttatagcta gagctagttc catactagga
     2521 gcaaaagctc caccaggaga gtctacaaca aaaagcactc ctttaatatt gctatcattt
     2581 ttagcattga taattttttc caaaaccgca gagctatcaa aaatttcacc ctttaaatca
     2641 atgcgttcta aatttgcaag attggagctt gaatttgcac taggcattaa aatccatata
     2701 acaatcaaca ataaaacaaa ggttttaaaa taagtattga taaattttat accgcatcct
     2761 aaagccttaa aaaatgattt taaaatttgc attcttttcc ttttataaat aatttatcca
     2821 cttccttagc atttaaaata aactgcaaag gagcttgctt tttatcacat tctcctagct
     2881 caaatacgct aaaatcagca attttacctt ttttaagctc tcctaaattt aaatttaaag
     2941 cccttgcagg ataaagcgtt gccatttgca aaagcttaga ggctaactct aataaatcaa
     3001 aattcttatg tataagcaaa ttcgcgcgca tttcatcaag taaggacaat gaaatatttg
     3061 agctaagtcc atcggttcct aaatggatat tcaatccact ttttaaagct gtttttaaat
     3121 ctaagctttt ttgacttaaa aggcgatttg aaaatgcaca atgtgtaata gaatgtaaat
     3181 ttttatccaa ccattcatat tcttttagat aaacacaatg cgtaaaaaga gtccttactc
     3241 ctttaaagag tttagcaaaa tcctttggtg cataaagagg cttaggatga agtgtgaaat
     3301 tttcaagcca ttttttaaac ccccctttag actctctaag ccagatattt tcagccttgc
     3361 tttctaaaaa atgcgtgcta actagtaaat tttgcttttt agctaaatca agagcaaaat
     3421 aagccaaact aggatgagtt gaataaggag aatgaatcga aattgctggg ataaaaaaat
     3481 catttttaaa tttcaaagaa ttttcaaatc tttttaaaaa ttcttgtttt ttatcttcaa
     3541 cttgattttc atttgtaccc aaaatttcat taaaaaatac tacacgtata cccttttgac
     3601 tagcctttaa acaaggatct aaatcactcc caaaacttga aatttcacct atagtgccta
     3661 taccgctttt ttgcattttt ttaatgcttt gaagtattaa ttcttctttg gcctgcgcat
     3721 ttaacatgga acgagaattt ataacacttt taagccaaat taaaaattct ccaaaatgta
     3781 aagttgttga atttgcacta aattctaagt gtgtgtgagg atttataaaa gcaggtaaaa
     3841 taaccgaatt tttaggtgtt ttgataattt tagccttggg atattttttt cttaaattat
     3901 ccaattcacc caattctaaa attttatctt caaaaacaaa ggcttgattt tctagtattg
     3961 taaaatcttc atcgcataaa aaaagatatc ttgcagcagc tataaacacg attttccttt
     4021 caaaaattac attgtagcaa aaatttattt ttaaaatgtt ataataaaag gttaaaaata
     4081 aatttttaag gttaaatcca tgaaaataat gattatccaa ggcccaaatg ttaatatgct
     4141 tggcgtaaga gaagtgggaa tttatggtgc tatgaaaatg gaagaaattc atgagcaaat
     4201 gaaacttgca gcatcgcaaa acaatgtaga acttgacttt ttccaaagta attttgaagg
     4261 tgaaatcgta gataaaattc aagaatgcct tggaacagtt gatggaatta ttatcaatgc
     4321 agcaggctat actcatactt cagtagctat tcgcgatgct attgcagcag tagctttacc
     4381 tacaattgaa gtacatatta gcaatgttta tcgcagagaa gaatttcgtc aaaaaagtct
     4441 tatagcgcct gtatgttctg gaactattgt tggttttggt ccttttggct atcacttggc
     4501 tttaatgggt ataattcaaa tttgcgaaca aataaaaaat ttgcgcgcga tgcaacaagc
     4561 acaacaaacg aataaataat aatgctaaaa attcaaggag taaaacactt tgaaaaaagt
     4621 cgtttttttc ctttttttag tcaaaatata cgatctttta aatatttagc tcttataggc
     4681 ttaggaagca atatagagcc cgaaaaaaaa agatttgata tgctttttcg agtaatgatg
     4741 gatgataaaa gatttaaaat tttatccaca tctcctatgt tgataaatga agcctttggt
     4801 tttaaagagc aaaaagattt taccaatgct gttatgttga tacaaactaa tttgcatgca
     4861 cgagcacttt tgaaagtttt actttattat gaagtaaaat ttaaacgcaa gagaactttc
     4921 aaaaacgctc ctagaacgct tgatttagat cttttatact tttcacaaaa agtcaagcgt
     4981 gataagtggt gtgaggtgcc tcataaaggg gctaaagaaa gagtgagtgt aattttgcct
     5041 ttaggcatga tataaggaat ataaatggga caacttatac atacttttac tgttgaagat
     5101 acagaacaaa ttatacccaa agtaaaagaa gattacggag ataaagcttt aattataaca
     5161 aataaacaaa ttcgtcctaa aaccttaaat cgcagtgcgc tttatgaggt tatggtagcc
     5221 atagaagaaa gcgactatga agaacactta aaaaaacaag gaaaatcttt acctgcaaaa
     5281 aaaagctcgc caaaaccatc ttctacctct cttgcagaag aaaaaattag atctcaaatc
     5341 cctcaagaag atgaagatgt agtcttggat ttctcaaaca ctcgcttaaa tacaaattta
     5401 aacactgtaa aaaacaatga cttaactaaa aaaacctatc aagattttcc acaaaacaaa
     5461 atcaaccctc atcaaaataa gactctaggc tttgatgatt ttaaagaaaa actaagtgaa
     5521 gttagcaatg aaatttctaa agtcacaaac acacctttag aaaattacac ccctaatcca
     5581 aattataata aaaaaataga aaattttgaa aagcaatttg aaaaacaaat caacaagctt
     5641 aacgataaaa tagatcttct tgcagatatg atgtgggacg ataaagctga agctagaaaa
     5701 aatcttatga tacctcctga atttgcaagt atttataaac aagccaaaga aagtggaatg
     5761 cttgaaaatc atctagaagc gattatgaaa gcaactatag aaaatatgcc agctgctatg
     5821 aaaaccaaca aagatgcggt tcaaagatat tttcactcac ttttaagaaa tatcttgcct
     5881 tgtcgtgttg aaagcgatat aaaaaaacaa aaaatcatga tgctagtagg cccaacagga
     5941 gtcggaaaaa caacaacctt agctaagtta gcttttcgct atgcttatgg agataagcgt
     6001 tataaaacag gtattattac gcttgatact tatagaatcg gtgcggttga gcaacttttt
     6061 cagtatgcaa aaatgatgaa acttcctatt attgatagca tagaaccaaa ggatttagat
     6121 gaagcgataa aaagcttaaa taattgcgaa gtaattttag ttgatactat aggaaattca
     6181 caatacgatc aaagcaaact tgctaaaact aaagaatttt taatgcactc aaatgcagaa
     6241 attgatgtaa atttagtggt ttctgcaaac accaaacatg aagatttaat ggaaatttat
     6301 aaaaattttt cattcttaaa tattgatact ttgattatta ctaaatttga tgaaacaaag
     6361 gtttttggaa atatcttctc tcttatttat gaaacaaata ttcctctaag ctttttctct
     6421 acaggacaag aagtgccaga tgatttagaa gtagccaata gtgattttct agttcattgt
     6481 attttagaag ggtttaacaa aggaaaaaat aatgaataac caagcaaata aacttcgcaa
     6541 tctcatgagt caaaatggaa ccaaaaaatc ccaaaacact cattttatag ctattacaag
     6601 tggaaaaggt ggcgttggaa aaagtacgat tagcgcaaat ctagccaatg ttttagcaaa
     6661 taatggctat aaagttgggc tttttgatgc tgatattggc ttggcaaatt tggatgtcat
     6721 tttaaatgta cgcatacaaa aaaatctctt gcatgtttta cgcggagaat gttctttgga
     6781 agatatttta atagaagtta agccaaattt atggctcatc ccaggcgaaa gtggagatga
     6841 gattttaaaa tataatgata aaaatattta cgagagattt ttaaatcaag caagtatttt
     6901 agatgagctt gattttctta ttatcgacac aggtgcgggt attggtggaa atattttaaa
     6961 ttttttagaa atggctgatg aagttatagt agtaactgtt cctgatcctg cagcaatcac
     7021 tgatgcgtat gcaaccataa aaacaacttc taagacaaaa gaaaatttac taatgctctt
     7081 taatgttgta aaaaatgaaa atgaagcttt aaaagttttt gaaaatatta aaaaagttgc
     7141 agatgcaaac attaaaaatc ctttaaattt agaattctta ggtcatttaa gcgcttctaa
     7201 agatgtaagt ggtagtatta aaaaaagaac tttatttagc gatgaaaaca cagcctcaag
     7261 tgatgagctt aaagccctag cctccaagct tttatataga ttggaacgga aagtgcttga
     7321 taatgtttca aatcgtagtt tttcaagttt ttttagaaaa attattgaaa gattttagca
     7381 ataaagagaa gagattatga ggccagaaaa ttacgtagca tttttcactg tttgtggatt
     7441 ttttatagga cttgcattta gcattattag tatagatgaa gcctttgata tactgatttt
     7501 tacttgtttt attactttta tgttttatgt ttttgttcat attgctatta tgaattttat
     7561 agatgtaaag aaaattagtg gcagaatctt taataaacac gattatgaaa aaactagcaa
     7621 taatattatc aacgatttag ttattcgtga aaagaaaatg gatataattt tagaaaagct
     7681 caatgaagaa agagaagagc taaagaaaaa tgaatccaaa gaaagacgaa gaaatgctaa
     7741 aagagccgcc taaagcttat gcacaaatgc taaagaaaga gcaagatgag cttgtacttt
     7801 cttacatgcc agctctacgt gctatggctt ttagactaaa agaacgcttg ccttcaagca
     7861 tagatgttaa tgatcttatt agcataggcg ttgaagaaat gataaagctt tcacgccgtt
     7921 acgataaaga acaaaataat aacttctggg gttttgcaag aaaaagagtt aatggctcta
     7981 tgcttgatta tcttagaagt cttgatgtaa tgagtcgcaa taatcgcaaa attattaaag
     8041 atattgatgc aatcatggat gaatatttcc ttgagaatga atgcgaacct gatgatgagt
     8101 atctagccaa aaaacttgat ttagatgtag aaaaaatcaa agaggtaaga acagctcatg
     8161 ctattagcta taccctgccc atcgatgagc aaatcgaact ttataacgaa gacaatactt
     8221 tagaaaaaat tgaaaaagaa gaacttttag aaaaaattca cgaagtgcta gatgatctta
     8281 aagagcgcga tcagttaatt attcagcttt attattatga agaattaagc ctaaaagaaa
     8341 tcagtgaaat tttacaaatc agtgaaagca gaatttcaca aattcacaaa aaacttctta
     8401 aaaaacttag agaaaggcta gtgtaatggc tgagatactt tcccaagaag aaattgatgc
     8461 tctacttgaa gttgtcgatg ataacaccga cacacccata gcctcaaatt caaaagatga
     8521 aaaagatgaa agaaatatcg ttgtatacga ttttaagcgt ccaaacagag tttcaaaaga
     8581 acaacttagg acgattaaag gcatacatga taaattggca agaaatttag cctctcaaat
     8641 ttcatcaatg atgagaagta ttgttgaaac taaacttcat tcagtcgatc agatgactta
     8701 tggagagttt ttaatgtctt tgccaagccc aacaagtttt aacgtttttt ctatcaaacc
     8761 tttagatgga aactgtgttt tagaaatcaa tccaagcata gcttttccta tgatagacag
     8821 gcttttaggt ggtcaaggcg atagctatga agcttcgcgt gagcttacgg atattgagct
     8881 taatttgctt gattctattt tgcgtatcat tatgcaaaga cttaaagaaa gttgggctac
     8941 tgtaactgaa atttatccta gtatagaagc taaagaatca agtccaaatg ttgtgcaaat
     9001 cgtatctcaa aatgagattg ttatcatggt agtaatggaa atcatcatag gaaattcaag
     9061 cggtatggta aatatctgct atcctgtagt gcatttagaa agtatattaa gccgtttggc
     9121 aaaccgcgac attatgatgg gtgaaacctc agccaaaaaa tcacgcaaca aagaacttaa
     9181 aactttaatc ggtcgtgctg aagtggtata tgaggcaatt ttaggaaaaa ccttaattaa
     9241 tgttcatgaa tttctagaac ttaaacaagg cgatatctta agacttgata gagaagcaga
     9301 tgataaagct atagtaagca tcgataaaaa agatgttttc ttagcgcaaa ttggattgca
     9361 tcgttttaga aaatctatta aaattttaga actcatacgc acagataaag atgaaatcaa
     9421 agaaattttg gaaaaatacg aagaagaacg taaagctaaa gctagtgttt atgatgagcc
     9481 tgaagaggag gatgaagaaa tatgatcaat gattttttaa aaatgtttac aaatgaatgc
     9541 atcagcacca ttgaaggttt aacaggaaaa agtgctgaat ttagcgaata caaagaattt
     9601 gatgtcaatg caagcgatac tttaaaagca cctttagtgt atgctatatt tgatatagca
     9661 aatggtggaa aaataggaat tttagccggt gctgttttaa tgagtgctat tggtgaatgg
     9721 atgatgggtg aagaagagat caccaaaaac gataaactag gtcctgatga aatggatgca
     9781 gctaaagaag ccatccaaaa tatcatttca gcattttcta caactttagg agctcaaaaa
     9841 gacattccaa aaatggattt tagtatagaa tcttgtgaat ttgtgcctga aagcgtagat
     9901 tttaaagatt ttaaaaaatt atttttatat gatgtaaaaa taggcgattt agaagaacaa
     9961 gtttctttag ccatggatca aacacttcac aacattctaa gtggaaaacc tgctgaaaca
    10021 ggaaatacaa gcactgattc taatcacaac gctgaagaaa aagcgataat gcttagcgaa
    10081 gaacttaaaa atatcaatct tatcatggat gttcgtttgc ctgtgcgtgt gcgtataggc
    10141 aataaaaaaa tgcttttaaa agatgtttta actatggata taggttcagt tgtggagctt
    10201 aatcaacttg caaacgatcc gcttgaaatt ttaatcggag ataaaagaat tgcttatggc
    10261 gaagtagtaa ttgtcgatgg taattttggt gttcaaatca cagaaatcgg atctaaaaaa
    10321 gaaagattag agcaattaag ataaaattac tctataaatt taaaaaaatt agctataatg
    10381 attttttata gttttgccaa aaaaggtatt tgatggatac aaaaatcata aaagatgttg
    10441 aaaaatttga aaatataccc gatctagaaa aggctattac tttttttggt tcagcaagac
    10501 ttaaagaaga taatttttat tatcagcagg ctaaaatttt ggcacaaaaa tgtgctcaaa
    10561 atggtttttg tgtgataagt ggtggaggtg gtggtattat gcgtgcagcc aacgaaggtg
    10621 ctttttcaca aaaaaataat acaaattcaa tgagttctgt agggtttaat atatttttac
    10681 ctcacgagca aaaacttaat gattttgtag aatataatat tacttttgag agcttagcca
    10741 tacgcaaaat ggctcttatt gaaaagagtc tagcttttgt gatcttccca ggcggctttg
    10801 gaacacttga tgaattgtgt gaaattctta cattaaaaca attagaattt aaaaaagatg
    10861 ttcctattat tttgtttggg agtgaatttt ggcgaggttt tgatgagttc gtcagaaatt
    10921 ctttactcaa acttgaagtg atttctaaag gagatgagtt aaagtataaa atcactgacg
    10981 acttagattt tataattaat actttaaagg aaatttaatg aaaattctag tcgctatgag
    11041 cggtggagtt gatagtacag tcactgctta taaacttaaa aatttaggtc atgaagttat
    11101 aggttgttat atgaagcttc atggcaagcc aaattaccac gaagaaaata tcaaaaaagt
    11161 agaaaaagtt gcaaactttt tgcaaattcc ttatcatatt ttagacttac aaaaagattt
    11221 taaaaacaaa gtttacatgc cttttgtgga tacttataaa gagggtaaaa caccaaatcc
    11281 ttgcgcttta tgtaaccgct ttatcaaact tggaaaactt ttagaatttg ctaaaagttt
    11341 aggttgtgaa aaacttgcca cagggcatta tgcaagactt gaaaacaact taataaaaac
    11401 cgcggtagat gaaagcaagg atcaaagcta ttttttagct agcgcagata aagaagcttt
    11461 aaaatatctt atttttccgc taggcgaaat gaaaaaagaa gatgtgaaaa aatttgcttc
    11521 cactatagag gttttaaaat cttttgccac tcaaaaggaa agttctgaaa tttgctttgt
    11581 tgaagatact tatgtgcaag ttttagatca gtttatggat acaaaaattc ctggagaagt
    11641 attagatagt agcggaaaag tggtaggcaa acatgagggc tatatgcact ataccatagg
    11701 caaaagaagg ggctttgaag tgcgtggggc acatgaacca cattttgttt taaaaatcaa
    11761 tcctaagcaa aatcaaatca tcgtaggaac caaagaagaa cttaaaatca gtgaatttaa
    11821 gctaaaaaat atcaatcttt ttatagacgc taaagagctt gattgcgaag taaaaatccg
    11881 ctatcgttca aaatctacac cttgtaaggt agaaatttat gaagataaaa gcgcaaaaat
    11941 cactctaaaa gatcctgttt atggacttgc tagcggacaa atggcagtct tttatgatca
    12001 tgataaagtc atagcaagcg gttttataga ataatttcta ggaattaatt cctagaaatt
    12061 attaataaaa tcctaaaatt ttccaccaaa aaagcccaac agctatcatc actactatat
    12121 caactatgga aatcacaaaa cctatactcc accatttttt aagagttaca tagcccgttc
    12181 caaaaataac aggagctgtt cctgttgcat agtgagttaa tgccatcata acattacctg
    12241 aagctatcat aataaaagca taaagaagtg gtggtgctcc taaggcaagc cctgcactat
    12301 aaaaaacaaa aaacattgct gatatatgag ctgtaatgga agcaaagaaa tagtgtgtat
    12361 ataaaaaagc aaggcttaaa aatatcataa tagaaatttc cccaagtccc atagcagaag
    12421 caaattcacc ttaagcttca gctaaaaact gtgtaacgcc aagtttgcca agtaaagttg
    12481 ccatcattac aagagctgaa aaccatacta aagtattcca agcagctttt tcggccaaaa
    12541 cttccccaaa agttaaaact ccactaatca acaccaaaga caacccaagc aaagccacac
    12601 tagtcgcatc aagagaaatt ccaaaaaaac aagcccaaag ctccagccca taaaagtaaa
    12661 agcgagacaa aaacactgag catgattttt tcactatttt tcatttttac aagttctttt
    12721 aatttatctt tagcaaaagt agaagcatta ggcgtggatt taatttctag cggagagaga
    12781 aaataaagca ccaaaggatt tggagctgta gctgtaataa acatagctga tgaaatagga
    12841 ttggctcttg ataatttacc aaagaaagat aagtgcctat tttattttgt gttccatctt
    12901 caggagtgga tttaaaactt cttgcaataa cttgaactat agaatttatg atagcccctg
    12961 ctcttgcagt atttgaagga gtaactggag ctaaaatagt ttcacaaaaa gctataaaat
    13021 aagcaatacc taaggttttt ttaccaagaa tactgataaa atgataagcc aaatgctctc
    13081 caagtcctgt tttaataact ccacgagcca caataataga ataactataa gctaaataag
    13141 agaatttgaa aaaccactta aagcgtcttt tatacccgtt ttagatttta aatttgatat
    13201 agcagtattt accttttcat cttatactct tttgatataa aaaatcaagt actgaagtat
    13261 ttaaaggaaa ttttagtctc atcaataagt tgttgcgtag aagttttcga agtagctttg
    13321 gtgtaaattt tacttagatt ttcaattggg tagtggtaat gccactaaga gctactatgg
    13381 caatagctat catacaaaca gcccccaaag gcattacttg taaaatcact gccataatca
    13441 cagcaataaa aagcccaaga aaatgccaag aattattttc caaacctaca aggagtaggt
    13501 ataggccaaa acacagctgc aattaaaata cgcagcacca acaagggaat tttctttcta
    13561 tccattgttt atcctttgat attggtaatg aaattctagt taactaatat tttaataaat
    13621 cttaaaatta taatttttaa ataaattttt aatttataaa aaagctagcc taattgaaaa
    13681 atgggaattt taaaatgaat aaaacccttc cccagataac tgcggcacac actaaaatca
    13741 agtgctctgc tgtgttccca ccctgaagcg gtgcttaaaa atagcattgc acaggtctaa
    13801 gaaaaggctc taaaattata tcacaatata cttaaaaagc cttgagaatt ataaaactaa
    13861 aaaaataata tataaataat aaattggtta aaattttata cattttttaa aatttattta
    13921 taaaaactat tattttattc tctaaaaata cgatataaaa ataatttata tcgcaaggaa
    13981 aaaatatgaa agttaaatgg agtagagatt ttagcattaa aaatatgcaa ttggacaaac
    14041 aacatgaact aatttttgaa attaccaatc ttgcaaatga tttagctctc aaaattcaag
    14101 aaaacaatac acagtataaa gatgatctaa aacaaattct tgcaaaacta tttcaataca
    14161 tcaaaattca ttttaaagat gaagaaaaat ttatggaaag cattgatttt cctttgattg
    14221 aagaacataa aaaatctcat caaatattag tagaaaaaac taaagagctt ttagagcatt
    14281 cagataatat tgtaaaaatg tctcaagaac tttccatatt aaccaaagat tggattttag
    14341 atcattttgc taatgaagat ttatggatag ctaattttac aaaaaaaacc ctacaccttc
    14401 aagaaatcca ttataccttg gaacaataca taaaactaaa atcaatcaaa caagacctaa
    14461 gagctgaaaa aactcatgat tatatttgca attgttcttt gcgtatccat gcagttccac
    14521 agactataca tcaagagctt gttagcaaag aaaatacctt aaagtgcgaa aaatgtgggc
    14581 aaattttagt tcatttggat tattttgatt tgaatcaaaa tttcgaaaaa ttcaatgcta
    14641 tttttgaaga tgcactacaa aatcaccatt tcacgactca aaaaaatgat atgggggggg
    14701 ggatagatga attttcaagt aaaaacctta gaaactttca atccttttga aagtttaaat
    14761 catgaacaag caaacacaga acaaattctt gattttagag ttatagattt taaacttctg
    14821 tgttctagtg taaaaccagc aaaaacaaaa acttatgaaa gaaaggattt tgacttattt
    14881 tatgcagatg atttttttgt aaaaaactac aataccatag tgcaaaaatt tcttatagaa
    14941 atttacccaa aaacccaaag ttttcctttt acagtcaaac ttagatccaa ctccaaccta
    15001 acccatctaa aagccagtat caaccttaca gaaaatttta aatattatcc taatttaaaa
    15061 tttgatattt tacaaaatat ctacaaaata atgatcaaac aaaaattttt aatcttaaga
    15121 cttgataaaa atttatttga caagattgat gattttatct tatcaataca aaaaagtcca
    15181 tctattaaag aaatagagct tgaaattgcc aaaggtgtag ataagattga acataaaagt
    15241 gatgaaatta tttatcatag agatgttaac gaagaatgtt ttgacgaaaa tattaactat
    15301 gatgaaggaa actactgtaa acctattgaa aaaaatgagc tactttttga atacatttat
    15361 agaattcttg gaaaagaagg acgaaattta agaggagaga tacttcattt aaatccaata
    15421 gcctttcttg ataatccttt tatcataaaa gatgaaagca tttacacaga agaattagaa
    15481 gatagaatta aatattttag cgccaattat ggatttttaa acaaagatca tacaggatat
    15541 tgtatcgcaa ataatttaaa attatcacaa atagggctta aaacaaccgg ttcaatcaaa
    15601 acaaatatcg atgaaaatat aaacttagaa atcactaatt ttgatataag tgatgatgct
    15661 attaaatcag gtattgtaaa tgttcaagct tcaaatataa aagtaaatgg gaatgttgga
    15721 gcaacaaaac tttatggaaa aaatatcagt atcaaaggct taactcatgc aaaaagcgaa
    15781 atttttgcac aagatatttt tattacaaca cacaaaggaa ctttgcaagc tgacactgta
    15841 tatataaaaa atttagaaaa tgggacaatt atagctaaaa atgtatttgt tgaaaactgc
    15901 atgggtggaa aaatagaagc agaaaatatt tatatttgca atttactaac ggataatact
    15961 ttatatccaa gaaaaaatct aatcataaca aacaatataa aatttaaaaa caatatcgta
    16021 gtttcaccac tagtttctat tgaaaacaac tcagatacag aatgcgaaaa tcttaaaaat
    16081 ctaagcctta aaataaaaag taagcttgat gacaccataa gcaaaatgca aaattactat
    16141 gattatctaa tcaaaaatca aatcaaaatc atcaaacttc aaaagactaa aaatcctaac
    16201 gccatagaaa tgaaattttc aaatctttat cacgatatca taaaaaaata caatcatctt
    16261 agcatttcgt ataaaaaatt tataaaatta aaatatcaaa ttgatgcgaa attaaatttc
    16321 ttaaatgaaa tggtttacaa tgtaaaaata tacataaaag ccgaaaatat cggagaggat
    16381 aattttttaa aattttatcc taacacaaac accaaccttg aactaaaaca tcatataaat
    16441 ttaaaagact atgaaaaggt tttatatctt gaaaaaggac agcaagtaag ttatattaaa
    16501 tcaagccata attatagcga aagcgacata gaagaaatta aaattatttt tgaaaaatta
    16561 gaaaaagata attcctaaga attatctttt catattaatg gctttttgta tcatctgatc
    16621 acttgtagtg atactttttg agcttgcatc aaaggctttt tgagttacga taaggtttga
    16681 aagctctgcg cttaaatcaa catttgattg ttctaagaat ccgcctttaa atttagctgt
    16741 attaacaact tgaccatctt tcataataaa acttgcatca ccgctatttg ccgttgctgc
    16801 aaaaatatta tctcccatag caactaatcc ttgctcattg ataaaattat ataaagcaag
    16861 ctttccaact atggcatttt taccattgct aaattgcgca acaatacttc catcatcgga
    16921 tatattatat tgttcaaaaa acccttcagc tacaccatct tgttgtgtaa ctacattttt
    16981 ttcgacgcct tctttaatat aaatcccact ataacccgaa ccaggcttgt tagcatcata
    17041 aggagaacct aaatcaatat taattgttcc accatttgga tttgcaatgc ttgtaatatt
    17101 gttttgaagc aaagcaccat ttttatcaaa aaccatattt ccttcagtcg gattgcctac
    17161 ggcattgcca ttagaatcat aaatttgtgc aatagcttta tattgtatat tatcgccttc
    17221 ttgcggtaaa actctttcaa gtgtaaccct taaagtgctt ttacttccat ctgcattata
    17281 aataggggat tctaaaatat ctttattggc tttttgttgc tctgttgaaa tttgagctgt
    17341 atcaagcttg atgctatttt catccaatcc ttttaaatca agctcgttac ttttaaaatt
    17401 tagattttca tctaaagtcg cttcaaagct tgtttttacg ccattatcat cagtgaaatt
    17461 taaaataatc ctatcacccg ctttagcact aaacacatct tctttgctaa cactaccact
    17521 aactacatat tttccatctt cagtttttgt aatgttaaat ttactaggat caagatctac
    17581 tttaactact tctgttgttg tgttagtatt taaacttcca ctccatttta cattttgagt
    17641 tacttgagga ggtaaataca tattcacagg tactttaata gccccttgag aagcggttgt
    17701 gcctatactg aaagaattat ttgaatttac agtaaaacca ttatttaccg gagttcctgt
    17761 gttaagataa tcccccataa gcccagcaac tctatcgcta tagttaatac cagtaaaagc
    17821 aggattcatt gttcctaaaa caaaatttcc ataagaatct accaaatatc cattggcatc
    17881 tcttctaaat gatccatttc tagtatagta agcattgcca tcagccccta aaaccccaaa
    17941 aaatcctttt ccttgcaaag ccacatcaaa ttcgccatca cttgcaacag gagaaccctg
    18001 ttcgaaaaca acttgagaag atgctgcacc gctaccataa ccaccttgag cagggttggt
    18061 tgattgggtt gttatggtag tataaaaaat atctttaaat tgagcatcag agtatttaaa
    18121 gcccgtggta ttgacatttg ctatgttatt agcagtgata tcaataccaa agctattgct
    18181 ttttactcca gaaatcccat tataaaatga attcatcatg gcttatgcct tttcctcttt
    18241 gtcgccatct tctgtagatc cagacccaga agaatctcca tcgcttgaac caccacttga
    18301 gtctccactt gaaccgcttc ctccagtaga tgaagatgaa ccaagcttat aatctgttat
    18361 ttcttgtatt gcatcaaaag gaacttcttg tccagccatt tttgcatagg caacaccatc
    18421 tttaaaaaca acaccttcga taggataagt tccgtaattt gcagtgattt tttcaccatt
    18481 tttattatta taaaccattt taacagtgta ctcaccatca cctgcataaa ccccatcgtt
    18541 atttcttcct ggccactcca tagtaaataa accttgagaa atagatttag catcgctttt
    18601 ttcactgaaa acaagtttat tattgctatc ataaatttct agcgtaacac cgttttcatc
    18661 agaatcttca ggcaaataca ttttaagagc gataagctca tctgcacctg taagtttgat
    18721 tttattatct gaaacagttg ccattttacc aatagcccct aaagctgaag tactcatact
    18781 tgtactaaaa gaatcagaaa gcttttgcat agtttcaacc attttttgca tagttgtatt
    18841 ggtattttgc tgcatttcaa gtgcgctaag ctgcgaagtt tgagtaagca ttttatcgct
    18901 atccatagga tctgttggat cttgatgttg aagctctatc aaaagaagtt ttaaaaacgc
    18961 atccttatct aaggtagcgt ttggattgct cactattcct gagctactgc ttgaatctgt
    19021 tctagttgtt ccactagtac ttcctgaaga agtagtacct gaagttgtag cagcagtatt
    19081 taaattccaa tccgatgatg atatcattat aaactccttt ttatttagtt ttttattatt
    19141 taagcaataa gtgttccaac ttagaaatac ttcgctaaaa caagctctag attgactttt
    19201 tcactttcat tttttccatc taaagcatct ttaaaaccat atccactacg attttttcct
    19261 tgattttgat tttgctctct tttgccttga tcactaaaat tcatttcaag tccagtaaat
    19321 cccatattta caagagaatt tttaaactcg gcttgatttt ggataaacaa attcattgca
    19381 ttggcattgg agttgaaatt gatatgaagg ttattacctc tttgtatcaa agttacctcc
    19441 acttctccaa gattattagg atttagagtg atactaagtt tagtaatagg cgctttgtat
    19501 tgatccacag cctcttttaa atcttgtgaa aaatactgca aagtttcttt aggagtgata
    19561 ttgcgagcat tgttttgtgt tactttattt aaatctttaa ctaaagaatt taactcatct
    19621 aagctatttt tatctacatt ttcactgtgc gtttttgttt gctcttgagt aaaagtttct
    19681 ttattagtag tattattatt aaaatttgca ttattctc
//
LOCUS       DARBAC010000021        19554 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.021, whole genome shotgun sequence.
ACCESSION   DARBAC010000021 DARBAC010000000
VERSION     DARBAC010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19554
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.021"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..313
                     /locus_tag="SB799_000551"
     CDS             <1..313
                     /locus_tag="SB799_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEG0867810.1"
                     /translation="DLFLRQNAKKIFTFYLKKWSQKTGLFYTHLSIKNMKTRWGSCNH
                     NKAYVNLNLKLIQKSLRAIEYVILHEISHLKFPNHSKEFYAFMEHFMSDFRQREKEFL
                     S"
     gene            355..1875
                     /locus_tag="SB799_000552"
     CDS             355..1875
                     /locus_tag="SB799_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867811.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYTLSKEENIYHFSIDA
                     DEENLKTFCDSLNFMSHSVFLKKFDVKAGQDFNLCMPEGKEFSRFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNFAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFNDFKIRLARDLFCFALGLKLFGNEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKKDKNMARISYLVSRYKEKAFILELSKDDEDILLINKELNLLKLSL
                     PKHSKELYEEIKKDEIGARLLENFSKEFPLLDESFELRNNFYSLLGLVGRVLNLGKNL
                     QESASELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
     gene            1856..4045
                     /gene="hypF"
                     /locus_tag="SB799_000553"
     CDS             1856..4045
                     /gene="hypF"
                     /locus_tag="SB799_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HEG0867812.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILSCTQKECENFIENLKNNLPPLARIDKLIITQISIPNYENFSITPSLKNAKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRTHTSMQELLMCEF
                     CKSEYKDPKNRRFHAQPISCPKCKINVFLKNPKGEILAKDQEAFMQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKALRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESI
                     IKDEFNLCQKLSEVFDFYLDYDREIMNASDDSIAQVVNGETMFLRTSRGLNPFYLERN
                     FNKKGTFLALGAELKNEFVVFYENKLLISPYIGDLKSLDVYERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKEF
                     LAKIPKIKLENLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKLFVEKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFVPLKYPCNDSSIALGQMVHFLNLEK"
     gene            4122..4865
                     /gene="hypB"
                     /locus_tag="SB799_000554"
     CDS             4122..4865
                     /gene="hypB"
                     /locus_tag="SB799_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HEG0867813.1"
                     /translation="MCKDCGCSINSNHTHDHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     ALRVKNAGALAYQITTGQSCHLDAFMVHEALHHLVIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNP
                     RADIITLDAKNGTNMELWYKVLKLKKEFF"
     gene            4865..5146
                     /locus_tag="SB799_000555"
     CDS             4865..5146
                     /locus_tag="SB799_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEG0867814.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            5130..6221
                     /gene="hypD"
                     /locus_tag="SB799_000556"
     CDS             5130..6221
                     /gene="hypD"
                     /locus_tag="SB799_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEG0867815.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKDGGLELKEEFSAYDASKKFDCTVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNV"
     gene            6218..7192
                     /gene="hypE"
                     /locus_tag="SB799_000557"
     CDS             6218..7192
                     /gene="hypE"
                     /locus_tag="SB799_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEG0867816.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADVKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDELKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            7192..7536
                     /gene="hypA"
                     /locus_tag="SB799_000558"
     CDS             7192..7536
                     /gene="hypA"
                     /locus_tag="SB799_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HEG0867817.1"
                     /translation="MHELSIVESLIELCEENALNNKACNVQEIYVKIGRLSGIEADLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDKTSILEENVFKCPKCQSIEYKITQ
                     GEDLHLMRLVME"
     gene            complement(7538..8503)
                     /locus_tag="SB799_000559"
     CDS             complement(7538..8503)
                     /locus_tag="SB799_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEG0867818.1"
                     /translation="MYRKELQTLLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKILVELCKNNTDNFF
                     LLELYDENSKQSDIEKIFSPHFARFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     TSFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEIALINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFS
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKN"
     gene            complement(8496..10430)
                     /locus_tag="SB799_000560"
     CDS             complement(8496..10430)
                     /locus_tag="SB799_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEG0867819.1"
                     /translation="MKEFLNSLSYGISPHEASNEFKQILRELLASHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKRANETSLVITKRYGEAVLGMNIKTGLSTALKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDIQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPRPLSENICSLKPHLDRLAYCFKITLDHENKVIKEELFEGIINSKRRFN
                     YDEVDEILIQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADARKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALSDELNLRAEVDKLIIKAQKKAEYSSINAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLENVEVQIMEAD
                     IVMAKIYAKITQRLIKEENV"
     gene            10549..11571
                     /gene="ilvC"
                     /locus_tag="SB799_000561"
     CDS             10549..11571
                     /gene="ilvC"
                     /locus_tag="SB799_000561"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEG0867820.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     IIGLREGSVSAVKAKNAGFEVMSVSEASKTADVVMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVAPKGIDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            11575..12657
                     /locus_tag="SB799_000562"
     CDS             11575..12657
                     /locus_tag="SB799_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEG0867821.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKP
                     DYFIDKQEDLISSNKDHYEIGIFQENEFDNNKFVSILEQKIQEIDDLNTSLNEQNLSS
                     VEQNLSLEQNQSLEQNFIPKDTNLTQDQNLTFNEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPELDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEVLKNQNIFFVDSKTI
                     GNSKANKIAKELNVPYIQRDVFLDNEDDVNYVKKQIQNAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKSVDLVYLSEIYGK"
     gene            12647..13420
                     /locus_tag="SB799_000563"
     CDS             12647..13420
                     /locus_tag="SB799_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEG0867822.1"
                     /translation="MASEILPDEFLELFKDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVITLSKAVVVAQADIKSGSMQS
                     AKLALELNKPLYVLPQRLGESTGTNLLLKENKAKLICDFKEFVSEFASIDINQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLA"
     gene            13417..13800
                     /gene="ruvX"
                     /locus_tag="SB799_000564"
     CDS             13417..13800
                     /gene="ruvX"
                     /locus_tag="SB799_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEG0867823.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGV
                     ANTRKKDGKLDSLSAFIMIKDYFAL"
     gene            13829..14668
                     /locus_tag="SB799_000565"
     CDS             13829..14668
                     /locus_tag="SB799_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEG0867824.1"
                     /translation="MQNILSSFTQEKNVCVFANTLKISIEELEKEFLKQKLKFKKINA
                     YCYLFDAKDKAILSSMKAFNEAHFYIQNYSSYLCALNLEVKAGQRVLDMCAAPGGKSI
                     NLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLENVEAKAGQSEEFAEISKCRRILPSLDYDGFFIAKLR
                     KLC"
     gene            complement(14844..15341)
                     /gene="msrA"
                     /locus_tag="SB799_000566"
     CDS             complement(14844..15341)
                     /gene="msrA"
                     /locus_tag="SB799_000566"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEG0867825.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVIDTEVGYSGGNPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPNQGYCQAVIAPKLQ
                     KIQSG"
     gene            complement(15382..15900)
                     /gene="ppa"
                     /locus_tag="SB799_000567"
     CDS             complement(15382..15900)
                     /gene="ppa"
                     /locus_tag="SB799_000567"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEG0867826.1"
                     /translation="MDLSKIKIGDIPNKINAVIEIPYGSSIKYEIDKDSGAIMVDRVM
                     ASAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            complement(15910..16488)
                     /locus_tag="SB799_000568"
     CDS             complement(15910..16488)
                     /locus_tag="SB799_000568"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEG0867827.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            complement(16485..18236)
                     /gene="aspS"
                     /locus_tag="SB799_000569"
     CDS             complement(16485..18236)
                     /gene="aspS"
                     /locus_tag="SB799_000569"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEG0867828.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLIAEGTIRPRGEGLVNPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDVEMSFCKQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKEDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELNLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNIDEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            18327..19187
                     /locus_tag="SB799_000570"
     CDS             18327..19187
                     /locus_tag="SB799_000570"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEG0867829.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLF
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCILCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            19187..>19554
                     /locus_tag="SB799_000571"
     CDS             19187..>19554
                     /locus_tag="SB799_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0867830.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIELDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGN"
BASE COUNT         6711 a         2627 c         3418 g         6798 t
ORIGIN      
        1 agatttattt ttaagacaaa atgccaaaaa gatttttact ttttatctta aaaaatggag
       61 tcaaaaaaca ggtttatttt acacacactt aagcattaaa aatatgaaaa cgcgttgggg
      121 ttcttgtaat cataataaag cttatgttaa tttaaattta aaactcattc aaaagagttt
      181 aagggctatt gaatatgtga ttttgcatga aataagccac ttaaaattcc ctaatcacag
      241 caaagaattt tacgctttta tggagcattt tatgagcgat tttagacaaa gagagaaaga
      301 atttttaagt taaaaatgtt atatttatag tttatttttc aaaaaaggca taatatgact
      361 ttggattttg attttattta taatgcggat aatgatattt ttgaatattt attgcgtttt
      421 tatgcgaaaa attacaatta tacccttagc aaagaagaaa atatttatca tttttctatc
      481 gatgcagatg aagaaaattt aaagactttt tgtgattctt tgaatttcat gagtcatagt
      541 gtttttttga aaaaatttga tgtaaaagcg ggacaggatt ttaacctttg tatgccagaa
      601 ggtaaagaat tttcaagatt ttcttatatt acgcatttaa attctaatgc ctatcaagaa
      661 aaaaaacttt taaacaaaaa cgaatggggc gtgttttgtg agtgtgaatt ttcaagcaat
      721 ttatcagaat ttgaaaaaat caatgaagaa aatttcaata cttttttaaa ttttgccttt
      781 gatttgttaa gtcaagaaaa aaagatttat ttaaaagata aaaatggcat ttatgaattt
      841 tctttgttta agaacgaatt tataggagat tttttgcttc cttgtgatat taaagctata
      901 aattcagttt ttgtttgttc aaatgaaaat ttaaaacttc ttgcaagttt ggaaaaacct
      961 ttgatgaagc taaggcttaa tgccatgttt agaaaaaatc ataatcttga ttttaatgat
     1021 tttaaaatca gacttgctag agatttgttt tgctttgctt taggtttgaa actttttgga
     1081 aatgaatata aatttttaag cgtaaaaaag atagaagaat atcaaaaaga tttttatatc
     1141 agtgctttag atgagcaagt ggtggttttg gaaggttttg aatttatcaa tgctaaggca
     1201 agagagctta ttttttctaa aaaagataaa aatatggcaa gaatttctta tcttgtaagc
     1261 cgttataagg aaaaggcttt tattttagag ctaagtaaag atgatgaaga tattttgctt
     1321 atcaataaag agcttaattt gcttaaactt tctttaccaa aacacagcaa agagctttat
     1381 gaagagatta aaaaagatga aattggcgca aggcttttag aaaattttag caaggaattt
     1441 cctcttttag atgaaagttt tgaacttcga aataattttt attctttgct tggcttagtg
     1501 ggtagagtgc taaatttggg taaaaattta caagagagtg ctagtgagct tttaaaaatt
     1561 gccgatgagt caaaaatgcc tcgtggagta aagattgatt atcgtttgaa agaagataaa
     1621 agttttgatt atacaagaac cttaagatct gctatgagtt ttatgttagc aggtgtagat
     1681 agtgctaata tcgcttatgg agcggttgaa agtttggctt atttcttgcg tgatacttat
     1741 gatgaattaa gagagaaaaa gcaaagcgat ttagcactta taagtggatc tttgtttgaa
     1801 cataaatctt tgcttaaaaa tactctcaaa catcttaaaa attgtcaatt aagcgatgtg
     1861 ccacttagga tataagatca aaatttcagg tttagttcaa ggggtgggtt ttcgtccctt
     1921 agtttatgaa ctagctttga aatcaaagct ttttggagag gtaagaaatg atggttttgg
     1981 ggtggaaatc atcctttctt gcactcaaaa agaatgtgaa aatttcatag aaaatttaaa
     2041 aaataatctc ccacctttag caagaataga taagcttata atcacacaaa tttctattcc
     2101 aaactatgaa aattttagta tcactccttc tttaaagaat gcaaaaagca cacctatgtt
     2161 aagtgatttt gcgctttgta aagagtgtaa aaaagaattt tttgatgaaa aaaatccacg
     2221 ctttttatat ccttttatca cttgcacaca ttgtgggcca cgctttagta ttataaaaag
     2281 tcttccttat gatagaaccc atacttctat gcaagaatta ttgatgtgtg agttttgtaa
     2341 aagcgaatac aaagatccta aaaataggcg ttttcatgcc cagcctatta gttgtcctaa
     2401 gtgtaaaatc aatgtttttc ttaaaaatcc aaagggtgaa attttagcta aagatcaaga
     2461 agcttttatg caaagtgcga agtttttaaa ggaaggtaaa attttagcca taaaaggcat
     2521 gggtggtttt catctcatgt gcgatgcttt taatgaagaa gctttaaaag ctctaagact
     2581 tagaaaaaat cgccctaaaa aaccttttgc tttgatgtgt aaagatttac aaagtgctaa
     2641 agaacttgcc tttatagatg aaaaagaaga agctttgctt ggtggggttt tagctcctat
     2701 tgtgatttta aaggcgaaaa aagccttttc tttaatcgca cctgatgttg ataaaattgg
     2761 tattatgcta gcttatacgc ctttacatct tttgcttttt gagtatttta aaggaagtct
     2821 tgtagcaaca agtgcgaatt taagcggaga aagtattatt aaagatgagt ttaatttgtg
     2881 tcaaaaactt agcgaagtat ttgattttta tttagattat gatagagaaa ttatgaatgc
     2941 aagtgatgat agcatagctc aagtggtaaa tggtgaaacc atgtttttgc gtacttcaag
     3001 gggtttaaat cctttttatt tggaaagaaa ttttaataaa aaaggcactt ttttagcttt
     3061 gggagcggag cttaaaaatg aatttgtggt tttttatgaa aataaacttt taatttctcc
     3121 ttatataggg gatttgaaaa gcttagatgt gtatgagaga ttttttaaac ttttagaatt
     3181 ttttaaacaa aattatgatt tgaaatttga tgcgatttta tgcgataaac acccgcattt
     3241 tagctatgca aaagaatttg aagaaaggat taaaatttct catcattatg cgcatttttg
     3301 tgcggcttat tttgaatatg aagaaaattt tgcaaaagac gaaaaggctt tagcttttat
     3361 ttgtgatgga acaggttatg gtgaagatgg caaaatttgg ggtggagaag tttttgtagg
     3421 aaatttgaaa gaatatgaaa gaattgcaca ttttgaaaat ttcactctta taaatagtga
     3481 tattaaaaat atacaaaatt tggctctaag tcttattttt cattatgatt tagaagataa
     3541 ggctaaggag tttttagcaa aaattccaaa aatcaaactt gaaaatctta aaaaaattta
     3601 ttcacattct aacttacaaa cgagttcttt aggacgcatt atcgatgctt ttggaagtat
     3661 tgtttttaac ttagaaaaaa gttcttatga agctcaagtt ggcttaatgt gtgaagcttt
     3721 ttatgataaa aatcttgatt tttcttataa gctttttgta gaaaaagggc aggttaattt
     3781 taaaaattta atcctagggg ctttacaaga tgaaaaaact aaggcaatta caggtatgtt
     3841 taatgccttg gcaaatttta tcatagattt tagcaaagat tatgatttaa aagtgctttt
     3901 gagcggagga gtttttcaaa acaaaacctt gcttgaaatt ttaaaagcta aaaattttga
     3961 tttttttgta cctttaaaat acccttgcaa tgatagctcc atagccttag gacaaatggt
     4021 acatttttta aatttagaaa aataaagcaa atattctaaa aactcataat tttttaatgc
     4081 ttttaaggtt aaaatgaaac aaaaaatata aaggaaagaa aatgtgtaaa gattgcggct
     4141 gttctataaa ttcaaaccat acgcacgatc atcatcatga tcaccaccat gaaaatccaa
     4201 gcttaaaaga aagtaaaacc atagaagtga tttctaaaat tttaagcaaa aacgatgaag
     4261 aagctaaaca caatagagcg cattttaatg aggctaacac gctttgtatc aatttaatga
     4321 gttctccagg tagcggaaaa accacgcttt tagaaagcac gatcaaggct ttgaaaaatg
     4381 aacttaaaat tgctgtgatt gaaggggatt tagaaaccaa taatgacgcc ctaagagtaa
     4441 aaaatgccgg agctttggcg tatcaaatca ctacagggca aagctgtcat ttggatgctt
     4501 ttatggtgca tgaggctttg catcatttag tcattgatga tgtggatttg ctttttatag
     4561 aaaatgttgg aaatttggtt tgtcctgcaa gttatgattt aggagagcat ttaaatgtgg
     4621 ttttgctttc agtaaccgaa ggaagtgata aaccgcaaaa ataccctgtg atgtttaaaa
     4681 aggctgatat agttttaatc acaaaggcag atttggctca tcattttgat tttgatgtta
     4741 aagaggcgac taggttgatt aaagaattaa atcctagagc agatattatc actcttgatg
     4801 caaaaaatgg caccaatatg gagctttggt ataaggtgct taaacttaaa aaggagtttt
     4861 tttaatgtgt ttgtctatac cttctgaaat tttagaaatc gatgagttaa acaatgcttt
     4921 agtgcaaact ttaggtgtga aaagaaaagt taatttggat ttgattgatg agcctttaaa
     4981 acaaggcgat tatgtgttaa tccatgtagg cgttgctatg gaaaaaatcg acaaagaagc
     5041 tgcactagaa agcattaaaa cctatcaaga aatagtagaa aaaatgaata gtggagagat
     5101 aaaaagtgat gaaggagatt tgggtttaaa tgaatttcat cgatgaattt agagataaag
     5161 aaagcatttt agctttaaaa aaactcatag aacaagaact taaaaatcct atcaatatca
     5221 tggaaatttg cggtgggcat acgcatagta ttatgaaata tgccctacct tctattttgc
     5281 caaaggaaat taactttatc catgggccag gatgtcctgt ttgtgttatg ccaagagttc
     5341 gcattgatac agctatcaag ttagcctcca tgaaagatac gattttttgt actttaggag
     5401 atcttttaag ggtgcctgga agtgaaattt ctctgcttga tttaagagct aaaggggctg
     5461 atgttagagc gctttattct ccacttgagg ttttggaaat cgctaagcaa aatttaaaca
     5521 aaaatatcat cttttttgct ataggttttg aaactactac gcctatgagt gctttacttc
     5581 ttcaaaaggt tatagaagaa aaaataaata atgtcttttt tcatatcaat catatcacag
     5641 ttccagcgcc tgtagaagcg atcatgaatg atgaaaatgt aaaaatcaat gcttttttag
     5701 gcccttctca tgtgagtgtg attacaggtt atggtattta tgagccttta gcagcaaagt
     5761 ttaaaacccc tatagcggtg agtggttttg agccagttga tattttagaa agtgtgttaa
     5821 atatcataaa acaaagcaat gaaggcactt ttaaagtgta taatcaatac aaaagagccg
     5881 taagtaaaga aggtaatgtt aaagcacaaa atttagtaaa aaaatacttt agggtgtgtg
     5941 attttgaatt tcgtggctta gggcttatta aagatggggg cttggaacta aaagaagaat
     6001 ttagtgctta tgatgcgagt aaaaaatttg attgtacggt gcaaagtaaa aatgaaagca
     6061 aagcctgtat ttgtgggcaa attttaagag gtttggccaa gccttatgat tgtaaagttt
     6121 ttggtaaggc ttgtacgcca agaagtccta taggaagttg tatggtttct ggcgagggtg
     6181 cttgtgcggc gtattataaa tactcaaagg tgaatgtatg aaaaatattt ccttagccca
     6241 cggaggtggc ggagaagaga tgaacgagct tttaactaag ctttttaaga tctttgataa
     6301 tgaaatttta aatgcaaata atgatgcagc gattttagga aatttggctt taagcacaga
     6361 ttcttttgtt ttaagtccga tttttttaga tgaagaggtt aatataggaa aactttgtgt
     6421 ttgtggttct attaacgatg ttttgatggt aggtgctaag ccaaaatatc taagtttagg
     6481 gcttatctta gaagaaggtt ttgagctaga aaaactagaa cgcattttaa aaagcattaa
     6541 agaagaatgt gaaaaatgcg gagttatgtt agtttgtggc gatactaaag ttgttcctaa
     6601 gggcaaagca gatgaaattt atatcaacac tacggcctta ggtgaaatta tttctaaaaa
     6661 agaaagtaaa aatatcaaag cagggcttag catacttctt tcaggtgata taggaaggca
     6721 tggagctagt gttttaatca aaagaaatga gttagaagct gatgttaaaa gtgattgtaa
     6781 ggctttggat aaagaggttt tagagctttt agaaaaagat ataaaggttg tagcaatgag
     6841 agatgctact cgtggggggc ttagcgcggt tttaaatgag tgggcaaagc aaagcggaaa
     6901 tgatcttttg atctttgaag aaaaaatcat cgttcaagat gaggttttag gactttgcga
     6961 gctttttggt tatgaagctt atgaacttgc aaatgaaggc acttttatac tttgtgtgga
     7021 aaaagaagat gagttaaaag ccttggaaat tctaaaaaaa tacaatgtaa atgcgagtat
     7081 tataggagaa gttttagaag agaaaaaagc acgcgtgatc ttacaaaacg cttatggggc
     7141 aaaacgcttt ttagaaagcc ctaaaggcga acttttacca agaatttgtt aatgcacgaa
     7201 ttaagtatag tagaatcttt aatcgaactt tgtgaagaaa atgccttaaa caataaggct
     7261 tgtaatgtac aagaaattta tgtaaaaatc gggcgtttaa gcggtataga agcggatctt
     7321 tttaagcgtt gttttgaaac ttttaaagaa aactcaaata tttgtaaaaa tgctaaactt
     7381 tttatagaac ttgctccgct tgaaatttta tgcttaaaat gcgataaaac aagtatttta
     7441 gaagaaaatg tttttaagtg tcctaaatgt caaagtatag aatataaaat cacacaaggt
     7501 gaggacttac accttatgcg acttgtgatg gagtgagtta gtttttcaaa atccttgcaa
     7561 gtttaagcaa atttgaaatt aaaaattctt tttttacgag cttagaattg gttttaagct
     7621 cgtattcgct tttaagtaaa agagtgaaaa tttctttata ttgttcgatt tttaaactaa
     7681 aggcttgaga gcttaaattt tgtcccactt gaggaggtgg agtatagcct aaaagatctt
     7741 taaagtcaat tttaccattg actttagcat aaagtgcgat tttaaataaa cgataaaaag
     7801 aattatataa agagttgatt aaagcaattt cattaaaatt gtctaaaatt ttttcaagtt
     7861 cgcttttaaa gtcttgtttt tttaaaattt tctcaaaaaa gctttcaaaa cttcctgtat
     7921 tcaaactata gcagtattgt tctatggttt tttcatctac tcttaaaccg ctaaatttat
     7981 taagttcact cgcagcaaga tataaatttt catcaaaact tgtaaaaagg gtaaataaag
     8041 cattttgagt gatttcaacc cctagttgtt ttgcttttat gcttaaaagc tccacgcctt
     8101 ctttagctcc gttagcttta aaaaatcttg caaaatgagg agagaaaatt ttttctatgt
     8161 cgctttgctt tgagttttca tcataaagct ctaaaagaaa gaaattgtcc gtattgtttt
     8221 tgcaaagttc gactaaaatt ttaagatctt ttgttggaat ttttttagaa gttttgattt
     8281 ctagtaattt tttttcgcta aaaagcgatc ctgcgcttaa aaaatcactc gcacgagtga
     8341 agttgtattc ttcaaaaaaa agttttaaag tttcatcggg cttatatttt tcttttataa
     8401 attcagcata aagttcgctt tgaaaattat ccgctccata aagaaagaaa aaattaggta
     8461 ttgaatcttt agaaagtagg gtttgaagct cttttctata cattttcttc ctttatgagt
     8521 ctttgggtga ttttagcata aatttttgcc ataactatat ccgcttccat gatttgcact
     8581 tcaacatttt ctagtaaatt tacacgtgta tcataaagga ttatatctgc tcctttgatt
     8641 tcatcatcta gtttagctat gcaaactcca tcattttgca caactaaagc tttaaatttt
     8701 ttgcctatat ttttagctgc ccatctagca aattttctat ccataaaatc aaaagcaacc
     8761 ttatccgcct ctctttcaag tgtgctaaga ttctcgcaag tgctttctat gtttaaaagt
     8821 agataattaa aaagtttttc atcgtttttt tgtttggctt ttaaaagtct gtgtaaaata
     8881 agatcagaat accttcttat agggcttgta aaatgtgagt atttatcaaa acctaagcca
     8941 aaatgccccg catttatgct agagtattcc gctttttttt gtgctttgat gatgagttta
     9001 tctacttctg ctcttaaatt taactcatcg gataaagctt gtatgtcgcg tatgagttca
     9061 ggaagattgg gtttaaaatt tacatcgatg cctagttcgc gtaattcatt taaaagctta
     9121 tcgatttttc ttgcatcagc acttaagtga tttctaaaaa cacctatatc tatgagtttt
     9181 gctgcggctt tattagctaa aagcatacaa tcttcgatta aattatgcga aggcgtgtct
     9241 ttttcaaaaa ctgtgctttt tagacttaaa ttttcatcta aattcattct taattcttcg
     9301 gtgcgaaatt caaaggcatt tttaagacgc attttgcgta aattttttgt gatttcaaaa
     9361 agctcataaa gccatgaaag ctcttttaaa tcaggttttt gtatcaaaat ttcatcaact
     9421 tcatcgtaat taaaacggcg ttttgaattg ataatacctt caaaaagttc ttcttttatg
     9481 actttatttt catgatcgag tgtgatttta aaacaatacg ctaagcgatc taaatgaggt
     9541 tttaaagaac agatattttc acttaaagga cgcggtagca taggtatagc aatatgtgga
     9601 aaataaatag aaaatccacg atttcttgct tctttatcta tagcactata agcataaaca
     9661 tattcgctaa catcagcaat agctacataa atttctcgtt tttggatgtc aaaataaatc
     9721 gcatcatcaa aatcttttgc atgtatagga tctatggtgc aaaaaggcaa ggctcttaaa
     9781 tccatgcgat tttcatacat actcgcatca acactatcgc cgtttgctag agcttctttg
     9841 atacaagcgt cgctaaattc gttattttta ttaaaaagag ctaaggagat tttttcatct
     9901 acgctttcat catcgatatg tcctaaaact tctatgatat tgttattttc attttctatt
     9961 tttaaaattg tccctaaagg tagtgctttt aaggattttt gagaagcttt taaggcagtg
    10021 cttaatcctg ttttgatatt cattccaagc acggcttcgc cgtacctttt ggtgattact
    10081 aaagaggttt cattggctct ttttagaact aaaatcacct ttgcactagg gcgttttttc
    10141 tttaaaggta gaagttttac tgcgactata tctttatagt ttgcaccttt taggtttttg
    10201 ttttctatca aaagatcttt tttgaaactt tcatcaaagc attgtaaaaa acctgtgcct
    10261 ttgcttgaaa tatcaagcac tccaaaggca aaaccattat taagataata tttgtttttg
    10321 tgttctttga tgatatgact agctaaaagc tctcttaaaa tttgtttaaa ttcattgctt
    10381 gcttcatgag ggctaatgcc ataactaaga ctgtttaaaa attctttcac ttttgatact
    10441 ttatgatttt ttgtaaaatt cttacataaa gtttataaaa aaaatatgaa atttatactt
    10501 taattgctat aataatacct ttaatttttg aatttttaag gagtgaatat ggctattaca
    10561 gtatattatg ataaagattg tgatttaaat ttaatcaaat caaaaaaagt agcaattata
    10621 ggctttggct ctcaaggaca cgctcatgcg atgaatttaa gagataatgg cgtaaatgta
    10681 attatcggac ttcgtgaagg tagtgtaagt gctgttaaag caaaaaatgc tggttttgaa
    10741 gtaatgagtg taagtgaagc ttctaagaca gcagatgtgg ttatgatttt agctcctgat
    10801 gaaattcaag cagatatttt taatgtcgaa ataaaaccaa atttaagtga aggcaaggct
    10861 atagcttttg cgcacggttt taatatccac tatggtcaaa ttgttgctcc aaaaggtata
    10921 gatgttatca tgatagcacc taaagcacca ggacacacag taagaaatga atttacttta
    10981 ggaggtggaa ctccttgttt aatagccatc catcaagatg aaagtaaaaa tgctaaaaat
    11041 ttagccttaa gttatgcaag tgcgattggg ggcggacgca caggtattat agaaacaacc
    11101 tttaaagccg aaacagaaac agatcttttt ggtgaacaag ctgtgctttg tggtgggctt
    11161 agtgctttga ttcaagcagg ttttgagact ttggttgaag caggttatga acctgaaatg
    11221 gcttattttg agtgtttgca tgaaatgaaa ctcattgtgg atttgattta tcaaggtggt
    11281 attgcagata tgcgttattc tatctcaaat actgcagaat acggcgatta tattacaggg
    11341 ccaaagatta ttactgaaga gactaaaaaa gcgatgaaag gtgttttaaa agatatacaa
    11401 aatggtgttt ttgcaaaaga ttttatctta gaacgccgtg caggttttgc tagaatgcat
    11461 gcagaacgca aaaatatgaa tgattctttg atagaaaaaa cagggcgcaa tttgcgtgcg
    11521 atgatgcctt ggatcagtgc taaaaaatta gtagataaag ataagaacta aacattgtca
    11581 aagaaaaaat tagttcaaat tcagcgttat ttaatcatag ctatactttt tttactttgt
    11641 atagctttag ctttgggaat tttagtaaaa tatcaaaatt cccaagatgt ttcttctgtt
    11701 aagccggatt attttattga taaacaagaa gatttaattt catcaaataa agatcattat
    11761 gaaattggta tttttcaaga gaatgagttt gataataata aatttgtaag tattttagag
    11821 caaaaaattc aagaaatcga tgatttaaat acaagtttaa atgagcaaaa tttaagcagt
    11881 gtggagcaga atttaagttt agagcaaaat cagagtttgg aacaaaattt tattccaaaa
    11941 gatacaaatt taacccaaga tcaaaattta acttttaatg aagatattca tttaaataaa
    12001 atttctaaaa aaccaaaact tgctattatt atcgatgata tggcaaatgc aagtcaggtt
    12061 agaggtttaa aagctttaaa tttaaagtta aatccttctt tttttccgcc agataaaaac
    12121 catagcgaaa cgccaaaact tgctttaaaa tttgattttt atatggtgca tttaccttta
    12181 gcagcgatta attacaataa acctgaactt gatactttaa atccaaatga tagcaaagaa
    12241 agaattttta aaaaaatcaa gcaaattaaa aaagatttta aggatttaag atacatcaat
    12301 aatcacacgg gaagtttatt tacaagcaat gaagaagcta tgagaaagct ttatgaggtt
    12361 ttaaaaaatc aaaatatatt ttttgtagat tctaaaacta taggaaattc taaagcaaat
    12421 aaaatagcca aagagttaaa tgttccttat atacaaagag atgtgttttt ggataatgaa
    12481 gatgatgtta attatgttaa aaaacaaatt caaaatgcag taaaacttgc acaaaaaaaa
    12541 ggttttgtta tagccatagg acatcctagg aaaaatactt ttaaagcttt agagcaaagt
    12601 aaagatttgt taaaaagcgt tgatcttgtg tatttgagtg aaatttatgg caagtgaaat
    12661 tttgcctgat gaatttttag aactttttaa agatttaaaa aagcctccta aaaaattaca
    12721 ctataaagga aatttatctt tattaaaaca agataaaatt gctattatag gttcaaggcg
    12781 tatgagtgtt tatacgaaaa attgtgtttt ttccttagcg agtatgctta aaaatgctca
    12841 tctttgtgtg gtaagtggcg gtgctttggg tgtggatatc accgcaagta tggcggctat
    12901 gccaaatact ataggtattt ttgctaatgg tttggatcaa atttatccaa gaactaatga
    12961 aaaaatcatt aaacaaattt atgaaaatgc tttggcttta agcgaatacg aagatgatta
    13021 tttgccaaaa aattatgact ttttactaag aaatcgtttg gttattactt taagtaaggc
    13081 cgttgtagtt gcacaagcag atataaaaag tggttctatg caaagtgcaa aacttgcttt
    13141 agaactcaat aaacctttat atgttttacc gcaaagacta ggagaaagta cagggactaa
    13201 tttgctttta aaggaaaata aagcaaaatt gatttgtgat ttcaaagaat ttgtaagtga
    13261 gtttgcaagt atagatataa atcaagatga gtttttagag ttttgtaaaa aaggtgtgag
    13321 tgttgatgag gctttaaaaa tttatggaca aaaagtttat gaatatgaac ttgagggaaa
    13381 aatttccata gaagggcttt ttataagggt tttagcatga gagctttggc tttagatgta
    13441 ggtttaaaac gcataggtgt agcgctttgc atagataaaa agatcgcttt gcctttagat
    13501 gcagttttaa gaaaaaatcg caatcaagcc gctaatgaaa ttaaaaattt acttaaaata
    13561 catgagattt ctttactcat tgttggcatt cctaagggtg gatcaagtga agaagaaatg
    13621 acaagacgca ttaagcattt tgtttctttg cttgaatttg ataaagaaat ttgctttgta
    13681 gatgaaagcg gaacaagcaa agaagcttta ggatacggcg tagccaatac acgcaaaaaa
    13741 gatggtaaat tagactcttt atccgctttt atcatgataa aggattattt tgctctctag
    13801 aatagaaaaa ctttatacca aagatgaaat gcaaaatatt ttatcttctt ttactcaaga
    13861 aaaaaatgtt tgtgtatttg caaatacttt aaaaattagc attgaagaat tagaaaaaga
    13921 atttttaaaa caaaaattaa aatttaaaaa gatcaatgct tattgttatt tgtttgatgc
    13981 caaagataag gctatcttaa gttctatgaa agcttttaat gaggcgcact tttatataca
    14041 aaattattct tcttatttgt gtgctttaaa tttagaagtc aaagcagggc aaagggttct
    14101 tgatatgtgt gcagctccgg gtggtaaaag tatcaatctt gcaaatttta tgcaaaatac
    14161 aggttattta gcttgcaatg agatgagtag ggatagattt tttattttgc aaaaaaatct
    14221 taaaaattac ggcgtgaatg ctaaagtttt tatgaaagat ggtaaaaata taggcaattt
    14281 atgtccttta aaatttgata aaatcttact tgatgcacct tgttcgactt ttgctaaaat
    14341 aggttttgat ttggaaaaaa gttataaaga aatcaaaaat attgcaaaaa ctcaaaaaaa
    14401 acttctacat tctgctttaa aggcattaaa aataggtgga gagcttgtat atagtacttg
    14461 cacctttacc aaagaagaaa atgaagaagt gatagagaat gctttaaaaa gtgagtttaa
    14521 attagagctt ttagatattg atttggaaaa tgttgaggct aaagcagggc aaagtgaaga
    14581 atttgctgaa atttcaaaat gcagacggat tttaccaagc ttagactatg atggattttt
    14641 catagctaaa cttaggaaat tatgttaatt gataaaatta ttcacattta aatacaaatt
    14701 cataaaaaaa cttaaaaaac aataaataat tttttcttta ttttaaagct taaagttcta
    14761 tttttaagta ctttgaaaag aaaatcacag cgtgaaaagg ctgtgaataa agttgaattt
    14821 tttttaacct taaaaagatg aaattagcct gattgtattt tttgcagttt tggagctatt
    14881 acagcttgac aatatccttg attgggatta tttataaaat aatgttgatg atagttttca
    14941 gctttgtagt aagtttgcaa tcttgaaatt ttagtaacta tttttttgct aaatattttt
    15001 tgctgttctt cgatgaaatt ttgagctaaa attttatctt cttcattttc gtaaaagatt
    15061 attgagcgat attgtatacc aatatctcca ccttgtttat ctatacttgt tggatcatga
    15121 attttaaaaa agagtgttaa gatttcaaga agagagattt gtttttcatc gtaatttatt
    15181 ttgacaactt ctatgttacc atcaccatta cacacgcttt catagctagg atttggattt
    15241 cctccgctat atccaacttc agtatcgatt acacctttta ggcgttcaaa tacggcttca
    15301 acacaccaaa aacaaccacc acctaaaacg atatttttca ttgcgagttt tccttgagtt
    15361 tagccctttg aagggctaag attatttgta gtttttgatt gctttttcta aaatttcaat
    15421 tgcagctttt tcatctttaa aatcttgtac tttaacccat ttgtttggct ctaaaatttt
    15481 ataagtttca aagaaatttt tgattttatt taaagttgct tgtggtaaat ccgtgtaagt
    15541 ttttatattg tcatatcttg catctatttt tgaatttgga actgcaagaa gtttttcatc
    15601 cattccgctt tcatcttcca tgattaaaac accaattaag cgacaaggaa tcacggctcc
    15661 agcttggata ggatattcat taagcactaa aatatccaca ggatcaccat catcagccaa
    15721 agtattggca ataaaaccat agtttgctgg gtaaaacatc gcactagcca taacgcgatc
    15781 taccatgata gcaccactat ctttatcgat ttcgtatttg atgcttgagc cgtatggaat
    15841 ttcgattacg gcattgattt tatttggaat atctccgatt ttgattttgc ttaaatccat
    15901 tttttctcct tatatacttt gaattttttt aatcagttct ttcatgtctg caacgatagg
    15961 ttcgatagtg cgttccccat cgataataaa atgaagtttt ttcttttgat aaaaatctaa
    16021 aatttcattt aaaggttctg tataaacttt cattctatta taaaacactt cttcattatc
    16081 atctgcacca cgatttctgc ctaaaactct ttctttggca acttcttcgc ttactcttac
    16141 ttctatgaca cctttaagac aaatttcatt ttgctcactt aaaaccttat caaattccat
    16201 catttgctct acacttcttg gataaccatc gatgataata gttttagttg gagcagcttt
    16261 tagagcacaa actatagtat ttacaacaac atctaaagga acaagattgc ctttggatat
    16321 aaaactatct atagtttttc caagctcact cccgcttgct acttcagctc ttaaaagatc
    16381 tcctgttgaa tagtgtgtga tatttgtcgc atctgcttgt gcgattaaac tagcatcggt
    16441 agtttttcca ctacctggtg cacctatgat taaaaacaat tctttcattt tatattctcc
    16501 cttaatttga ttcctaattc tctcattgct tcattgctag caggcgatgg tgcatctgtc
    16561 attaagcatt gcgctctttg ggtttttgga aaggctataa cctctcttat actgtttgct
    16621 cctgtaacta gcatgatgag tctatcaagt cctatagcga tacctccatg tggtggagca
    16681 ccaaaactta aagcatcaag caagaagcca aatttttctt tttgttgttc ttcatcgata
    16741 tttaaaagtt taaatacttt ttgttgaata tcgtttttat ggattcttat actacctcca
    16801 cctagctcaa cgccatttaa aactacatca taagcaatag atgaaatttc ttctaaatca
    16861 gtctcatcga tattttttgg catggtaaaa ggatggtgca tcgcagaata acttccatca
    16921 tcattttgtt caaacatagg aaaatcaaca acccataaga attctaaggc atttggatct
    16981 ataagattta actcgttggc taagaaaatt ctaaatcttc ccatataatc aagcacggtt
    17041 tttttagctc ctgcaccgaa aaataccaca tctcctactt caagctcaca gcgtttgctt
    17101 agctcattta aatcttcttc gctaaagaat ttgcaaagcg gacctttaag cccatcttct
    17161 ttaacttgta taaaagctaa gccttgggca ccaaatttac gcacaaattc ttcaaatctt
    17221 tgcatttgtc tttttgaaaa aatagtatcg ccttttggaa cgcgtatggc tttgatgcga
    17281 tttttctttg tatctttggc aatatttgca aaaatttcat tatttgactt agcaaaaata
    17341 tcaatcacat caataaattt aagatcaaat cttaaatccg gcttatcaga gccataattc
    17401 tccatagcgt ctttgtattg catttgtcta aaaggggttt gaatttcttt gccgcaagct
    17461 ttgaaaatat cttttaaaaa agtttcagct acattgatta catctttttg tttgcaaaaa
    17521 ctcatttcaa catcaatttg tgtgaattca ggttggcgat cagctcttaa atcttcatct
    17581 ctaaaacatt ttgcgatttg aaaataacga tcaaaaccgc tacacattaa aagttgtttg
    17641 aaaagctgag ggctttgtgg aagagcataa aattcaccct gatgcacacg agaaggcacg
    17701 agataatctc ttgcaccttc gggagtagct ttggtaagaa taggggtttc aacttctaaa
    17761 aatcccatat ttgccaaaga atttctagct gctatacaag ctttagaacg caaggcaaaa
    17821 ttttcataaa gtttaggatt tcttaaatct aaaaagcgat attttaagcg taattcttca
    17881 tttacacttt catcagcgat agcaaaagga ggtacggcac tttcattttc tatggtaagt
    17941 ttagaaacaa ctacttcgat ttctcctgtt tttaatttag gatttacaag tccttcgcca
    18001 cgcggacgaa tagtaccttc tgcaataagt acaaattcat ttcttgcatt ggaagcgatt
    18061 tcatgagctt ctttgctatc atttggatcg caaacaagtt ggataatacc acttctatct
    18121 cttaaatcta taaaaataac tccaccatga tcgcggtagc tatttaccca accgcaaagt
    18181 ttaacgcttt gaccaacatg ggaaattccc aagtctgtat tataatgact tcgcaaattt
    18241 attccttgaa aaagattttt taagataatg agcaaaatta tagtattttt attcttttgc
    18301 tttgctaaga tttgatataa ttttttatgc aaaataaaat agattataaa aatattaaaa
    18361 aaatcggact tgttacacga cccaatgtga gtttagataa ggaaatttta aaacttcaat
    18421 cgattttatc tatatataaa gttgagcttg tattgtttaa agaaagttct gaaattttag
    18481 atttgccaaa gtatggattg gatgatttgt ttaaaatatc tgattttgtt atttctttag
    18541 gtggagatgg aactttgatt tctttatgtc gtaaagcttg tgaatatgat aaagcagttt
    18601 taggaattca tgctggacat ttaggttttt taacagattt taaagttgat gaagctgaaa
    18661 atttttttca agcttttttt caaggagaat ttagaataga aaagccttat ttgttaagtg
    18721 tttttttaga agataagcaa ggaaaaatct tagaaaaatt ggcttttaat gatgtggtta
    18781 tcagtaaaaa caatcaagct tctatggctc atatagaagt ttttagaaaa gaaaagaaat
    18841 ttaatgaata ttttggagat gggcttattg ttgcaactcc tgcgggttca acagcttata
    18901 atttaagtgc aaatgggccc atagtttata ctttagctca agcttttatc ttaactcctg
    18961 tttgttctca ttctttaaca caacgcccta ttgttttgcc aaaaggtttt gaaatagaga
    19021 ttatggcaaa ggattgtata ctttgtattg atgggcaaga aaattataaa atgaatgatt
    19081 ttaaaagtat aaaagtgggt ttaagtgata aaaatgtggc tttaattcac ccaaaaaata
    19141 gggattattt tcaaatttta aaagaaaaat tacactgggg aaattgatga taaatagaat
    19201 ttttatgaaa gaaaatcttg gttttaaaaa ggctgagctt gaaatttcta aagggcttac
    19261 cgtttttaca ggcctaagtg gagctggaaa atcggtcttg tttaaaggaa ttttatccgc
    19321 attttctttg agtgaaagtg aggctaaaat tgtcgaaata gaactagatg ataagttgga
    19381 tttagaaagt tttggtatag aaagtgaaga ggagaatgtt tttaagcttt taaaagaaaa
    19441 aaacacaaaa tattttatta acaatcaaag catagcgaaa aaaagtttgc aaaatttaag
    19501 taaaactttt attaagtatt taagtgcaaa ggaaaataac gaatttggaa atga
//
LOCUS       DARBAC010000022        19551 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.022, whole genome shotgun sequence.
ACCESSION   DARBAC010000022 DARBAC010000000
VERSION     DARBAC010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19551
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.022"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..390
                     /locus_tag="SB799_000572"
     CDS             <1..390
                     /locus_tag="SB799_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEG0867831.1"
                     /translation="NKENSTWFDPEKIYKRGRNKEEIIKNYYYCKMPCVSLMTSEGEN
                     LKGKELASNGAIFVCPVSSSLSRLKGLNEFEGDFLNLDDNIEKFFEFYIKDFYKACDY
                     CRDFSKPYKRIPIAIQTNKTLKLEKED"
     gene            complement(503..579)
                     /locus_tag="SB799_000573"
     tRNA            complement(503..579)
                     /locus_tag="SB799_000573"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(543..545),aa:Met,seq:cat)
     gene            715..802
                     /locus_tag="SB799_000574"
     tRNA            715..802
                     /locus_tag="SB799_000574"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:749..751,aa:Ser,seq:gga)
     gene            916..1872
                     /locus_tag="SB799_000575"
                     /pseudo
     CDS             916..1872
                     /locus_tag="SB799_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002932162.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
     gene            2012..2087
                     /locus_tag="SB799_000576"
     tRNA            2012..2087
                     /locus_tag="SB799_000576"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2045..2047,aa:Ala,seq:ggc)
     gene            2091..2166
                     /locus_tag="SB799_000577"
     tRNA            2091..2166
                     /locus_tag="SB799_000577"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2124..2126,aa:Val,seq:gac)
     gene            2194..2724
                     /locus_tag="SB799_000578"
     CDS             2194..2724
                     /locus_tag="SB799_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0867832.1"
                     /translation="MQNTIIQKAVHKDLNSILEITKDALNAMKAMNFHQWDENYPNEI
                     VFKEDIQAQELYVFKENDEILGFICINEKFEPEFYKQVIFNKNYDEKAFYLHRLAVKQ
                     NAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(2704..3306)
                     /gene="leuD"
                     /locus_tag="SB799_000579"
     CDS             complement(2704..3306)
                     /gene="leuD"
                     /locus_tag="SB799_000579"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEG0867833.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKEEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(3308..4720)
                     /gene="leuC"
                     /locus_tag="SB799_000580"
     CDS             complement(3308..4720)
                     /gene="leuC"
                     /locus_tag="SB799_000580"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEG0867834.1"
                     /translation="MIMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSVDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPELGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLIAQYGTAKGTGYAIEFCGELIRNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ESITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALSYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(4707..5783)
                     /gene="leuB"
                     /locus_tag="SB799_000581"
     CDS             complement(4707..5783)
                     /gene="leuB"
                     /locus_tag="SB799_000581"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEG0867835.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERIAHIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYQDINLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     TKSYLNTDEMGDCILEILKENNNG"
     gene            complement(5780..7315)
                     /gene="leuA"
                     /locus_tag="SB799_000582"
     CDS             complement(5780..7315)
                     /gene="leuA"
                     /locus_tag="SB799_000582"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEG0867836.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLSINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRALDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYENEEENK
                     FILEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARITNLKPALKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGISTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            7635..8264
                     /locus_tag="SB799_000583"
     CDS             7635..8264
                     /locus_tag="SB799_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867837.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTDSQICEKLLDDVEKYFIGGG"
     gene            complement(8300..8944)
                     /locus_tag="SB799_000584"
     CDS             complement(8300..8944)
                     /locus_tag="SB799_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEG0867838.1"
                     /translation="MNKKLLSIIASTTLFSNLALADENSGFFIGADAAWMHAQVKSEL
                     KHKNTKRNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGD
                     FTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG
                     ALYDLTPHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF"
     gene            complement(9082..9465)
                     /gene="queF"
                     /locus_tag="SB799_000585"
     CDS             complement(9082..9465)
                     /gene="queF"
                     /locus_tag="SB799_000585"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEG0867839.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFIYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            complement(9712..12279)
                     /gene="flgE"
                     /locus_tag="SB799_000586"
     CDS             complement(9712..12279)
                     /gene="flgE"
                     /locus_tag="SB799_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEG0867840.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTNYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGTAKTPIYGLDSVHGYNKKDGTAKNENDTGITQ
                     FYTTSKNSIEVTEKGVDAGSLFNANGTGLNLREGQGIWVSYADAKFSTAGEGAQANQG
                     NNGVFDPNQKVNQNPVIFWGHEQKPTTLDITLNGVHIQNNSIKSLDEAIAYINTFTAP
                     TDTRDGTGVKAVKKADGSGIDFINDNADGTTDNMKNIDLQVNANNSAGELINIRVAGN
                     PADFDWNNINLRPAGNPIVNGAGSAWIAGNAAQNQNRIQIVTAHKYIYSSTPVELDPM
                     YNPDGGPVFNPANQNTAGTAENNYMNAIQGSLLNTTPRTFRTTEDLRELLQRDARYGV
                     DYDGSGGFEADGRDVNEGVKVTVGATGEFIISNPNEIPARPGVTPPGGQDNRKPHNIS
                     FNVTAYTDTQGKISKNDAFTTIFKGFDGVLTVGNSNRQSEQLFLSAFSAGLEIYDSLG
                     SKHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIIVGTARFNNDGSLS
                     NYTPKTINFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKP
                     DAIRVDDKGNILGEFTNGKTFAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGE
                     AGTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
     gene            complement(12483..12965)
                     /gene="ruvC"
                     /locus_tag="SB799_000587"
     CDS             complement(12483..12965)
                     /gene="ruvC"
                     /locus_tag="SB799_000587"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEG0867841.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEANKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            13061..14383
                     /gene="dnaA"
                     /locus_tag="SB799_000588"
     CDS             13061..14383
                     /gene="dnaA"
                     /locus_tag="SB799_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEG0867842.1"
                     /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQSNKSTKIDIAHIKAQSTILN
                     PSFTFESFVVGDSNKYAYGACKAIAHKDKLGKLYNPIFIYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRTVIYLARTLTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDASLKAKIEELKNKILVKSQS"
     gene            14543..15610
                     /locus_tag="SB799_000589"
     CDS             14543..15610
                     /locus_tag="SB799_000589"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEG0867843.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKYLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMVL"
     gene            15639..17948
                     /gene="gyrB"
                     /locus_tag="SB799_000590"
     CDS             15639..17948
                     /gene="gyrB"
                     /locus_tag="SB799_000590"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEG0867844.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQ
                     GYNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEANYIFDKIKDRGLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(17974..18315)
                     /locus_tag="SB799_000591"
     CDS             complement(17974..18315)
                     /locus_tag="SB799_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HEG0867845.1"
                     /translation="MKKTILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQNKTH"
     gene            complement(18318..>19551)
                     /locus_tag="SB799_000592"
     CDS             complement(18318..>19551)
                     /locus_tag="SB799_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HEG0867846.1"
                     /translation="QNDQKENRRDFLKNIGFGLFGISVLSNFSFENFLGSKALAKELP
                     DFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLHKG
                     WTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYGAV
                     ACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDETL
                     IAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVPVN
                     PVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEVYV
                     SNDYGVTWAKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLAQW
                     NPGGYINNACHRVNVYGV"
BASE COUNT         6839 a         3313 c         2824 g         6575 t
ORIGIN      
        1 aataaagaaa attctacatg gtttgatcca gaaaaaattt acaaaagagg gcgcaacaaa
       61 gaagagatta taaaaaatta ctattattgc aaaatgccct gtgtaagttt aatgacaagc
      121 gaaggagaaa atctaaaagg taaagaattg gcttcaaatg gagctatttt cgtatgtcca
      181 gtttcaagtt ctttaagtcg tcttaaaggt ttaaatgaat ttgaaggcga ttttctaaat
      241 ttagatgata atatagaaaa attttttgaa ttttatatta aagatttcta taaagcttgt
      301 gattattgta gagattttag caaaccttat aaaagaattc ctattgccat tcaaaccaat
      361 aagactttaa aacttgaaaa agaagattaa aaatatattt caatctttaa tattagtata
      421 tttgcttttg ttcataataa actagcaact aaaaacaaat atttttaaat ttttaaaaaa
      481 caaaagaagc aataaaaatg gatggtgtca agggggagac ttgaactccc gacctccggc
      541 ttatgagacc agcgctctaa ccagctgagc taccctgact aaaaataaaa atataattat
      601 actacttttt actaaaaatt ttctgatttt ttaaaaaaat aattttattt tcaatattta
      661 aaaaatttct ttatttttaa agcttttata gatataatga acactttatt tcatagacag
      721 gtgtccgagc ggttgaagga gcacgcctgg aacgcgtgta aagtgcaagc tttcgagggt
      781 tcgaatccct tcctgtctgc cattcttatt tttaatattt aaaatattat tgttttgtca
      841 aaagttattt tattgtttat aaattcttaa atttttgata aaatattaaa aattttattt
      901 attaggtttt ttataatgtt acaatcaaga cttttgatga atttaaaagg aataggaata
      961 tcttttatac caagatattt tttcaaataa atttagataa aaatttttaa tgatatttta
     1021 aaatacaata ttaaagactt agaagaaata caaactcgag ttaaatatta taatcaaata
     1081 gatgaatttt ttacacctac agcaaaggaa aaaataggaa aatttccttt taaaagcacc
     1141 tcttatgctt ttgatgctta tgaaatcagt aaatacttta aagatgaatt tttatggaat
     1201 aaagaatttg gcgatgtaag acatactttt aaagaagcaa ctatttgcaa atcgagatct
     1261 ttggaaaata atataaataa tattttatta aaacttgata aaaataggca cttttgcttt
     1321 ttaaaagata acataaacta tgaaaataaa aaggatatag cgatatttag aggagcagta
     1381 tatcaaaaac atcgaaaaga attttttgat tcttattttg gtagaacttt ttgcgatata
     1441 ggagatactt caaaacaacc tagccaatgg aaaaaaaact ttttaaacaa aaaagaacaa
     1501 atgaaatata aatttataat ttctttagag ggtaacgatg tagcaagcaa cttaaaatgg
     1561 gctatgaatt ctaattcttt agttttagct ccaaaaataa cttgcgaaac ttggtttatg
     1621 gaaggaactt taaaaccaaa ttatcacttt gctttgattg ataatgagaa tttgtcagca
     1681 gtaattgaat attttaaaag tcgcccaaaa gatgcattgg aaattattaa taatgctcat
     1741 caatatatta agaaattttt agataagaaa aaagaattcc atataggaat tttggttttg
     1801 accaaatatt tttattattc tagacaactt gaacttaaca aaaaaagaga tattttagaa
     1861 ttaatcaaat agtaaaatta ctctcattaa ttctctaatt tttcataaaa aataaatctt
     1921 tttatacata tattacatca taaattaaaa atttgatttt agttttcagc caaaaacaag
     1981 taatattgcg ataaaatctc agacttataa aggggcatta gctcagctgg gagagcacaa
     2041 cgctggcagc gttggggtca gcggttcgaa cccgctatgc tccaccatat ggttccgtag
     2101 ctcagctggt agagcactac cttgacatgg tagtggccgt tggttcaagt ccaatcggag
     2161 ccaccatcac ccttccttat acaaaggatt atcatgcaaa acactatcat acaaaaagcc
     2221 gtccataaag atttaaattc tatacttgaa atcacaaaag atgctttaaa tgctatgaaa
     2281 gctatgaatt ttcatcaatg ggatgagaat tatcccaatg aaatagtttt taaagaagat
     2341 atacaagcac aagaacttta tgtgtttaaa gaaaatgatg aaattttagg ctttatctgt
     2401 atcaatgaaa aatttgaacc tgaattttac aaacaagtta tttttaacaa aaattatgat
     2461 gagaaagcct tttatctaca ccgtttagcc gtcaaacaaa atgcaaaagg caaaggcgta
     2521 gcacaaaaac ttttaaattt ttgcgaaaat tttgccttgg aaaatcacaa ggcaagttta
     2581 agagcagata ctcatagtaa aaattttcct atgaattcgc tttttaaaaa gcttgatttt
     2641 aatttttgtg gaaactttga catacctaat taccaagatc cttttttagc ttatgaaaaa
     2701 attctaaacc aaaaagcttt ttgagttttt ttcataggct ttgatttgtg cttcatgttt
     2761 taaagttaaa gctatattat caagtccttc caaaagacaa attctgtgaa aatcatctaa
     2821 atcaaaagaa aaaatcttat ctttaaaaaa tactcttttt tccaacaaag aaatttctat
     2881 atttttatct tgggattttt ttaactcatc aactatttcc aaaacctcgt ctttagcaag
     2941 ttctatggta agcaaaccat ttcctaaggc attgttttta aaaatatccg caaaagaagg
     3001 tgcaataata gctctaatac cataatcaac caaagcccaa ggcgcatgct ctcttgaaga
     3061 gccactacca aaattttcaa aacttaccaa aatagagcta ttttgatatt cttctttgtt
     3121 aagattaaaa tccatattta aaacactttc tttatcatct aaataacgca aatcatggaa
     3181 caaatgcttg ccaaaacctt gcttagacac tgcaagtaaa aattgcttag gtataatttg
     3241 atctgtgtct atattggcat attctaaagg acaagctata cctttatgta taataaattt
     3301 ttgcatatta aactcctaaa tactttctat tatcacaaat aacaccttct atggcacaag
     3361 ctgccgcact tgcaggactc atcaaatgag tgatagaacc tttaccttgt ctgcctacaa
     3421 agttacgatt tgaagttgaa gcaactcttt gacctgaatt tgccttgtca tcattcatac
     3481 caagacacat agaacaccct gcatatctcc actcacaccc tgcctcgata aaaatcttat
     3541 caagtcctaa attttcagct tcttttctta cttgcattga accaggcacg attaaagctt
     3601 taacattttt atgaattttg cgccctttta agatatcagc ggctattttg agatcttcta
     3661 aacgcccatt tgtgcaagat cctataaata caatgtcgat ttttacccct tctataactt
     3721 gatcttgctc taaatttaca taagataaag catcaagcaa agatttttgc tcactttgat
     3781 ttttaaaatc acttattttt ggaatttttt catctatacc aatcacttgc gaagggtttg
     3841 ttccatagct aatttgtggt tttatcttgc ttacatctag agtaatactc tcatcatatt
     3901 ttgctccttc atcgcttctt aaactcttcc aatactcgca atacttttga aattcttctc
     3961 ctttaggtgc aaattccttt cccttaatat actcaaaagt gatctcatca ggagctatca
     4021 tacctacttt cgctccaaat tctatagcca tattacaaag agtcattcta gcttccatgc
     4081 ttaaatttct tataagttct ccgcaaaatt ctatagcata gcctgtgcct tttgctgtgc
     4141 catattgtgc aatcaaatac aaaatcaaat ccttagcata aacgcctttt tgaaactgcc
     4201 ctttacattc gattttcatg gttttaagtt tggcttgttt taaagtttgc gttgccatga
     4261 catgctctac ttcactcgtg cctataccaa aggctaaagc tccaaaagcc ccatgtgttg
     4321 ccgtatgaga atccccacaa actaaagtaa ccccaggtaa agtaaagcca agctcaggac
     4381 ctactatatg aactatgcct tgatttttat ctccaagtcc taaaagcctt actccaaatt
     4441 ccttagtatt ttgcatcaaa gttgtaattt gctcttttgc catatcagaa caagcattta
     4501 aatccacact tttagttgaa acatcatgat ctatggtagc caaagttaaa tccgctcttg
     4561 ccattctacg cttagccatt ttaagccctg aaaatgcttg agggcttgtt acttcatgga
     4621 ttaaatgtct atcgatataa agtataggaa gttcgttttt gccttcataa accacatgag
     4681 catcaaagac tttctcatat aaagttttag ccattattat tctcctttaa aatttctaaa
     4741 atacaatccc ccatttcatc ggtatttaaa tacgacttag tatttaaatc cttggtcatt
     4801 tttccttgcg ccaatgccaa agatatagca ttttctatat cctgtgcggc ttgttcttct
     4861 ttgaaactat actttaacat caaagccgca cttaaaattt gagctatagg attagctata
     4921 tttaaatgag ctatatcagg cgcacttcca cctgctggct cataaagtcc aaaaccttta
     4981 tcgtttaaac ttgctgaact taacaaaccc aaagatccat taatggcagc taactcatca
     5041 ctcaaaatat caccaaaaag atttgaacaa agcataacat caaaaatgct aggatttttt
     5101 acaatctgca tcgcagcatt atccacatac atgtactcta agtttatatc ttgataatct
     5161 tttgcaacat ttgccaccac ttctcgccac aaaatagaac ttgctaaaac attcgccttg
     5221 tcgattaaat gcactttttt ctttcttatt cttgcacttt caaaagcgat atgagctatc
     5281 ctttctatct cttttttagt gtaaatttca gtatcatacg cactttcttt acctaaatct
     5341 tgcttaccaa aataaatccc acctgtaagc tctctaacac ataaaatatc cactcctttt
     5401 tggataatct cattttttaa aggtgaagca tgagttaaac tttcataaat tttacaagga
     5461 cgcaaatttg caaacaaatt aaaatgcttt cttaaaggca aaagcgaggc tctttcaggt
     5521 ctttgatcta tgggcaaatt atcccactta ggccctccaa cagagccaaa taaaatcgca
     5581 tcactttgct cacaaagctt taaagtttca tcacttaaag ccactccata agcatctata
     5641 cttgcaccgc ctattttagc ttcattaaat tcaaaactaa aattgtattt ttgcgcgata
     5701 aaagttaaaa tttttaaagc ctctttcatt accaaaggcc ctataccatc tcctgctaag
     5761 acagctactt tataagtttt catgccattt tcctttcttc tacttttaaa gagcgataaa
     5821 tcgcattgta agcactcaca aaagcttgtg ctgaagcttc tataacatct gttgaaattc
     5881 cttttccatg gaattttctc cctttaaatt ccaaatccac atccacttgt ccttgagcat
     5941 ctacccctga actttttgca ttgatactat aagcttttag cgcaggcttt aaattcgtta
     6001 tcctagcaat gcagttaaaa actgcttcaa caggaccatt tcctgtgcaa gcttcagttt
     6061 ttaactcttc tttaatacgc atacaaacac aagcagttgg gatattgcca ctaatcacgc
     6121 ttaatttttc aagtataaat ttattttctt cttcattttc atagcttaaa aacatcaaag
     6181 cttccaaatc ataatcatac acttgaccct ttttatccgc aaggcgtaaa aaacgctcat
     6241 aaacatcatc taaattataa gtattttcat catagcctaa attttcaagg caagttttta
     6301 tcatagccct tccacttctt gccgtcatta acatacgatt ttcatgaatt cctatggcac
     6361 tagggcttat gatctcgtaa gtttgcctat ttttaagcac tccatcttga tgaatgcctg
     6421 aactatgaga aaacgcattg ctacccacta tagctttatg cgaaggtata ctttcattag
     6481 tgatagctga aactaatttt gaagttttaa agatattttc acatttaata tcagtataaa
     6541 aaccttttaa ataatctttc ctagttttta tcgccataac cacttcctct aaagcacaat
     6601 tacccgccct ttcgccaagt ccatttatag tgcactctat ctgtcttgca ccttgtaaaa
     6661 tagcacttaa actattgccc gttgccatac ctaagtcatt gtgacaatgc acagaaatga
     6721 tagctttgtc tatatttggc actttgttaa ataaaatttt gatgatatta gcaaattcac
     6781 ttggtaaggt atagcctacg gtatctggga tatttatagt tttagcgcct gcttttatcg
     6841 cattttccac cataaaacaa agattatcta tcggagttct tcctgcatct tcgcatgaga
     6901 attctacatc atcagtataa gatcttgctc ttataatcgc tctttttgcc atagacaaaa
     6961 tttcatcaaa atcttttttt aatttatctt gcatatgcaa agtcgaagtg gctataaaag
     7021 tatgaattct aaaatgcttt gccactttta aagcttcata agccatatct atatctttat
     7081 ccaatgctct agaaagtgca caaatagttg agtttttaac cttagaagcg atcttttgca
     7141 ccgctttaaa atccccttgt gaagataccg gaaaacctgc ttctataaca tctacgccta
     7201 aattttcaag cgctaaagcg atttgtaatt tttgattgat actcaaagaa ctgcctaaag
     7261 cttgttctcc atcacgcaaa gtggtatcaa agattatgat tttattatct ttcatgattt
     7321 aatcctttaa aaccaaacag actgaatgaa ttaaaaattc aaaaacttaa caacaatgat
     7381 aaaaaattaa aaatgtaaaa aatgattaaa aataaaattg agttttagag tgagagttgc
     7441 agtagcagat taaaagtatt gtctttactt ttttgttgga ctgaatttga aatttcaaaa
     7501 atttgtttca tcttttcctc ctttgttaaa attaatactt aatgtatcat atttttagta
     7561 aatgtgtttg taaaattctt aaattaagaa aattattgat ataattgtaa ttttaagtaa
     7621 caaaaaggaa gttgatgtta aaagaactct tagagattaa aaaagaaatg gaacctgtta
     7681 tccacgaagc caatgtgaaa ttaaatgtcc tagctcgtga agtcatagtc cgaaaaaaag
     7741 aatacgaaat ttatgggcct atggtagatc gtgtttatct tgataatgcc atttatgtta
     7801 aagttatgtc aagtggacgt gatgtaaaaa cagacaatgt gactataaaa aatggttttt
     7861 atatggtttt tgttgcccct gaaaaagaaa gcacaaaaga tatcaaaaat aaactcaaag
     7921 tagcttatga aggacttgat aacaaattta tcgctacact tatacgctct tgccaacgct
     7981 ttaaagagat cataaacaaa acccaagcta cacttgctaa agcttctaaa atgaatgtgg
     8041 tagtaaaaac gaatttaggt gaagcaagtg ctgctctaaa atttaacatc actatagaat
     8101 atactaaaga gaatcaaaaa ctcactcgtg aaaattcaaa atcagcagga agtttcagag
     8161 atactaaaac ttatatcaat cttgtagtag aaaaaaatac agattctcaa atttgtgaaa
     8221 aactacttga tgatgttgaa aaatacttta tcggtggagg ttgatttcat taatgcaagt
     8281 tataaaaact tgcattagat taaaatttat aattatatcc taaatataca ccataatttg
     8341 tttgtttagg atcgtaaaag tttgaaccca ctttattttg ataaaaattt ctagaattat
     8401 aatgaatttg ctctgcttta aagcctaatt ctatttcatt atgtggtgtc aaatcatata
     8461 aagcacctat tttcgctcca taaaaataac cgtcaaaatt ttgcgacaaa gataaaaagc
     8521 ttgtttttaa ggtaagatct gttcttgcat atcctccata cacacctaaa acagctctgg
     8581 ttttttcaaa aagcttagga gtaaaatcat aacctgttaa aaatttatgt gtagtaaaat
     8641 caccttcgat ttgaatttta ggagttttga taaaatcact aaattcatca gaataattat
     8701 aaccagcata aattctatga ttttcattta aacgatatcc aagttttaga ccaaacgatg
     8761 gtatattacc tgaaatatct ccattaaaat ttcgctttgt attcttatgt tttaactcac
     8821 tttttacttg agcatgcatc caagctgcat cagcacctat aaaaaaacca gaattctcat
     8881 ctgctaaagc caaatttgaa aacaaagtag tacttgcgat aatgcttaat aattttttat
     8941 tcataaccta actccttata ataaaattcg atctaaaaaa tttagatctt tttatattat
     9001 atattcttca aagattaaat aagaattttt gataaaatac ttaatctttg cataaaaata
     9061 tgttaatatt ttactcaaat attattttgg cactaccata tcgctacgac attctatcac
     9121 cgtatgcaca tttccacgcg gattaaaatc ccccacaact ttaatccatt ttggttttaa
     9181 tttatctttt aaagtattgt aaatttcatt gatacttgct tcatgtgaaa catttctata
     9241 tataaaagta ttgatataaa gttttatcgc cttaagctca accacaaatt tatcaggcat
     9301 atactcaaga taaatcgtcg caaagtcagg ataacccgaa cgcggacaac aacacataaa
     9361 ttcaggcaaa gtgattttaa tgatatagtc attttttgca tcatttggcc aaatttccat
     9421 attttctaca tcaaattctt tgatttcttt ttcaccataa cgcataaatt ttccttaaat
     9481 ttaaattcaa gcaaaaatta taacaaaata agtttttaaa acgattatga tacagataag
     9541 aaaatgcaat tttattgcaa ctcaccccct agcaagagtg agttagcaat aaattgaagg
     9601 cagttcaagc ctaagcctag tattacaaga ctaccaagat aggcttgtaa agcaaggctt
     9661 gctcccttaa agggagcaaa aaacaatatt ttatagaata ctaagcttaa attattgttt
     9721 aagctggatt agagtttgaa gcatttgatc actcgttgaa atggtttttg agtttgcttg
     9781 ataacctctt tgaatgataa taagctctgt taaagaacga cttaaatcca catttgacat
     9841 ttcaagagct gaggttttca tttcaccacg acctcctgtt cctgcttcac ctactacgat
     9901 attaccacta tttgcagtga ctttaaaaag atttccacca atttcctcaa gacctgagtt
     9961 atttgccact gaagccattg ctatttttgc tacagcaaag gttttgccat tagtaaattc
    10021 acctaagata ttacctttat catccacacg gatagcatca ggttttaagt tacctgaagt
    10081 ataaccatca gttgcctgtc ctgttagagt tgaagcagaa tttgagctta caaggccgtc
    10141 attgcttcca cttgttccaa aagaaagttt gatttgttga tttggtgcgg caccattgtt
    10201 tggtgagaaa tttatagttt ttggtgtata gtttgataaa gaaccatcgt tgttaaatct
    10261 tgctgttcct acgatgatat tgtttggtcc ttcacctgta gtgttaatct ctgcaggttc
    10321 tggtacacgg atgatcattt gccattcatt acccccatct tgagtggtac tttgcttaac
    10381 aaactgcact tctaaagtat gttttgaacc taaggaatca taaatttcaa gtccagctga
    10441 aaaagcactt aagaagagtt gttcgctttg gcgattagaa tttcccacgg ttaaaactcc
    10501 atcaaaacct ttaaaaatag ttgtaaaagc atcattttta ctaattttac cttgagtatc
    10561 agtataagct gttacattaa aacttatatt atgaggtttt ctattatctt gtccacctgg
    10621 aggtgttaca cctggcctag ctggaatttc atttggattt gatattataa attcgcctgt
    10681 tgcacccact gtaactttta ctccttcatt aacatctcta ccatcagctt caaatccgcc
    10741 acttccatca taatccaccc catatctagc atctctttgt aaaagctctc ttaaatcctc
    10801 tgtggttcta aaagttcttg gagttgtatt taacaaagaa ccttgaatgg cattcatata
    10861 attattttca gcagtaccag cagtattttg atttgcagga ttaaaaacag gtccaccatc
    10921 tggattatac ataggatcta attcaactgg agttgaacta taaatatatt tatgtgctgt
    10981 tactatttgt attctatttt gattttgagc agcatttcct gctatccaag cacttccagc
    11041 accattcact ataggattac cagcaggtct taaattgata ttattccaat caaaatctgc
    11101 aggattacca gcaaccctta tattaataag ttctccagct gaattattgg cattaacttg
    11161 taaatctata tttttcatgt tatctgtagt gccatcggca ttatcattga taaaatcaat
    11221 cccactacca tctgcttttt ttaccgcttt tactcctgtt ccatcccttg tatccgttgg
    11281 tgcagtgaag gtattgatat aagctatagc ttcatctaaa ctttttatag aattattctg
    11341 tatatgaact ccatttaaag taatatccaa agttgtaggt ttttgttcat gtccccaaaa
    11401 tataacagga ttttgattta ctttttgatt aggatcaaaa acaccattat taccttgatt
    11461 tgcttgagct ccttctccag ctgtactaaa cttagcatct gcataagata cccaaattcc
    11521 ttgaccttct cttaaattta aacctgtacc attagcatta aaaagtgatc ccgcatccac
    11581 acccttttcc gtcacttcta tagaattttt ggaagtcgtg taaaactgag tgattcctgt
    11641 atcattttca ttttttgctg ttccatcttt tttgttatat ccatgaacag aatcaagtcc
    11701 atatatagga gttttagctg ttcctatatt taaaccacta tttaaattcg ctttgatggc
    11761 tacttctgtc gattttgctg cagggatatg catacctgga tcgataaaaa tattttgcgg
    11821 agttcttgag ctatctatac tttgagtatc ccagttgata ttccaccctt ggacaacaaa
    11881 acctgcatta ttaacaaaat ttccataagc atcgagttta aaatccccgc tccttgtaag
    11941 atagtttgta agaccaccat catcactcac cataaaaaaa ccatcaccat ttatagcaac
    12001 atcagtgttt ttatctgtgg tttgaactga accttgagaa tgaattctag ttgtagaact
    12061 tactgaaaca ccaagaccga tttgaagtgg attagatccg cctcttccat cagttggagc
    12121 tgtagcgatt ttcacagttt ggctaaacat agtcccaaaa tctgcacggg agtatttaaa
    12181 accagtggta ttaacatttg aaatgttatt accttcaaca tccatcgcaa cttgatgtgc
    12241 ttgtagtccg cttacgccag accaaagtga tctcatcatc ttaaatcctt tataaaatat
    12301 tgctttaaaa aatttaacgc tttggcttta aaaaactttt gcgtttatgt gaagtttaca
    12361 agcaagttct gttccaactt ttgaaatttt ttatgaattt tttaaaaatt tatagaaaaa
    12421 atttaaaggt attttgggag tttatgaagc tttgggcttt tgtgtaataa aaattaccaa
    12481 aatcacaccc taactcttaa atttgctgca tgggttaaag ctactgcgat agcatctgtg
    12541 atatccaaag gcttgatatc tttactaagt cctaaaagcc tttttaccat aaaagcaact
    12601 tgttctttag ttgctttggc ttttcctgta acggcttttt ttacttgtaa gggagtgtat
    12661 tctgcaaaat ctccatgaat ttgaagaatt tttaaagata gggctccgcg aaattgtgcg
    12721 agttttaaaa cggtttttgg attgtaagca aaaaagatat cttctatagc cacctcatca
    12781 aaagaatgat ttttaaaaat caagtccaaa ccctcacaaa gctctgtgat ttgatactgt
    12841 aaggtacttg gctttatctt tataagtcct gcttctatga gaatgttttt tcctttgttg
    12901 gcttctatga tagcataacc acaatttctc gaacctggat ctatacctaa aattttcaaa
    12961 ttcatacctt ttgaaaaata aaatacaaaa gcggatttta accttttttt ataaaattta
    13021 agataaaatt tatacattat gcaaaattta aagagagatt atgaatccaa gccaaatact
    13081 tgaaaattta aaaaaagaat taagtgaaaa cgaatacgaa aactatttat caaatttaaa
    13141 attcaacgaa aaacaaagca aagcagatct tttagttttt aatgctccaa atgaactcat
    13201 ggctaaattc atacaaacaa aatacggtaa aaaaatcgcg catttttatg aagtgcaaag
    13261 cggaaataaa gccatcataa atatacaagc acaaagtgct aaacaaagca acaaaagcac
    13321 aaaaatcgac atagctcata taaaagcaca aagcacgatt ttaaatcctt cttttacttt
    13381 tgaaagtttt gttgtagggg attctaacaa atacgcttat ggagcatgta aagccatagc
    13441 acataaagac aaacttggaa aactttataa tccaatcttt atttatgggc ctacaggact
    13501 tggaaaaaca catttacttc aagcagttgg aaatgcaagc ttagaaatgg gaaaaaaagt
    13561 tatttacgct accagtgaaa atttcatcaa cgattttact tcaaatttaa aaaatggttc
    13621 tttagataaa tttcatgaaa agtatagaaa ctgcgatgtt ttacttatag atgatgtaca
    13681 gtttttagga aaaaccgata aaattcaaga agaatttttc tttatattta atgaaatcaa
    13741 aaataatgat ggacaaatca tcatgacttc agacaatcca cccaacatgc taaaaggtat
    13801 aaccgaacgc ttaaaaagtc gttttgcaca tgggatcata gctgatataa ctccacctca
    13861 actagataca aaaatagcca tcataagaaa aaaatgtgaa tttaacgata tcaatctttc
    13921 taatgatatc ataaactata tcgccacttc tttaggggat aatataagag aaatcgaagg
    13981 tattatcata agtttaaatg cttatgcaac catactagga caagaaatca cacttgaact
    14041 tgccaaaagt gtgatgaaag atcatatcaa agaaaagaaa gaaaatatca ctatagatga
    14101 cattttatct ttggtatgta aagaatttaa catcaaacca agcgatgtga aatccaataa
    14161 aaaaactcaa aatatagtca cagcaagacg cactgtgatt tacctagcta ggacacttac
    14221 agctttgact atgccgcaac ttgcgaatta ttttgaaatg aaagatcata cggctatttc
    14281 acataatgtt aaaaaaatca cagaaatgat agaaaatgat gcttctttaa aagcaaaaat
    14341 cgaagaactt aaaaacaaaa ttcttgttaa aagtcaaagt taagtgaaag gatgtgaaaa
    14401 ataaattcta gagtgtgaaa aaaagaaatt aagcaaagta tgataaaata caaatttgat
    14461 tattttgctt tgaagaattt cacaatttca acaagcttat tattacaacg aatttaaaat
    14521 taaaataaac caaggagaaa aaatgaagtt aagtatcaat aaaaatactt tagaatctgc
    14581 agtgatttta tgtaatgctt atgtagaaaa aaaagactca agcaccatta cttctcatct
    14641 tttttttcat gctgatgaag ataaacttct tattagagct agtgattatg aaataggtat
    14701 caactataaa ataaaaaaaa tccgcgtaga atcaagtggt tttgctactg caaatgcaaa
    14761 aagtattgca gatgttatta aaagcttaaa caatgaagaa gttgttttag aaaccattga
    14821 taatttctta tttataagac aaaaaagcac aaaatacaaa cttcctatgt ttaatcatga
    14881 agattttcca aattttccaa atacagaagg aaaaaaccaa tttgacattg attcaagtga
    14941 cttaagtcgt tctcttaaaa agatattacc aagtattgat acaaacaacc caaaatactc
    15001 cttaaatggt gcatttttag atataaaaac agataaaatt aacttcgtag gaactgatac
    15061 aaaacgcctt gcaatctata ctttagaaaa agcaaataat caagaattta gttttagtat
    15121 ccctaaaaaa gctattatgg aaatgcaaaa acttttctat gaaaaaatag aaatttttta
    15181 tgatcaaaat atgcttatcg ctaaaaatga aaattttgaa ttctttacaa aacttatcaa
    15241 tgataaattt ccagattatg aaaaagttat accaaaaact ttcaaacaag aactcagttt
    15301 ttcaactgaa gattttatag atagtcttaa aaaaatcagc gttgtaactg aaaaaatgaa
    15361 acttcatttt aacaaagata aaatcatctt tgaaggtata agtttagaca atatggaagc
    15421 aaaaacagaa cttgaaattc aaacaggagt aagtgaagaa tttaatctta ctataaaaat
    15481 caaatattta cttgatttct taacttctat agaagaagaa aaattcactt taagtgtaaa
    15541 tgaacctaat tcagcattta tagtcaaatc ccaaggacta tcaatgatta tcatgcctat
    15601 ggttttgtaa taaaacaagt aaaagataaa ggaaaaatat gcaagaaaat tacggtgcga
    15661 gtaatattaa agtcctaaaa ggcctagaag ctgttagaaa acgcccaggt atgtatatag
    15721 gagatacaaa cataggcgga cttcatcata tgatttatga agttgtggat aattctatcg
    15781 atgaagctat ggcaggacat tgtgatacta tagatgtaga aatcactact gaaggaagct
    15841 gtatagttag tgataatggt cgtggtattc ctgttgatat gcacccaact gaaaatatgc
    15901 caactttaac tgttgtttta actgtccttc atgcaggggg aaaattcgat aaagatactt
    15961 acaaagtttc aggcggtttg cacggtgttg gggtttcggt tgtaaatgca ctttctaaaa
    16021 aacttgtagc tacagttgaa agaaatggag aaatttatcg tcaagaattt tcagaaggta
    16081 aagttatcag tgaatttggt gtgataggaa aaagtaaaaa aacaggaaca actatagaat
    16141 tttggcctga tgatcaaatt tttgaagtga ctgaatttga ttatgaaatt ttggctaaaa
    16201 gatttcgtga acttgcatac ttaaatccaa aaattactat aaattttaaa gataaccgcg
    16261 taggcaaaca tgaaagtttt cactttgaag gtggaatttc tcagtttgtt acagacttaa
    16321 ataaaaaaga agctttaact aaagcaattt tctttagcgt agatgaagaa gatgtgaatg
    16381 ttgaagtagc tttgctttac aatgatactt atagtgaaaa tttactctct tttgtaaata
    16441 atatcaaaac tccagatggt ggaacacacg aagctggttt tagaatgggt ttaactcgtg
    16501 tgataagtaa ctatatagaa gcaaatgcaa gtgctagaga aaaggataat aaaatcacgg
    16561 gtgatgatgt gcgtgaaggt ttgatcgcta ttgtgagtgt aaaggtacct gaaccacaat
    16621 ttgaaggaca aaccaaagga aaacttggtt caacttatgt gcgtcctata gtttcaaaag
    16681 ctagttttga atatttgact aaatattttg aagaaaatcc tattgaagct aaagctataa
    16741 tgaacaaagc cttaatggca gctagaggaa gagaagcagc gaaaaaagct agagaattaa
    16801 cgcgtaaaaa agaaagttta agcgtaggaa ctttaccagg gaaattagct gattgtcaaa
    16861 gtaaagatcc aagtgaaagt gaaatttatc ttgtggaagg ggattctgca ggaggttctg
    16921 caaaacaagg tagagaaaga tcttttcaag ctatattgcc tttgcgtggt aaaattttaa
    16981 atgttgaaaa agcaagatta gataaaattt taaaatctga gcaaattcaa aatatgatta
    17041 ccgcttttgg ctgtggtata ggtgaagatt ttgatctttc aaaacttaga tatcataaaa
    17101 tcatcatcat gacagatgcg gatgttgatg gatcacatat acaaaccttg cttttaactt
    17161 tcttcttccg ttttatgaat gaacttgtag caaatggaca tatttatcta gcacaaccac
    17221 ctttatatct ttataaaaaa gctaaaaagc aaatttattt aaaggatgaa aaagctttga
    17281 gcgaatacct gatagaaaca ggaatagaag gtttaaacta tgaaggtata ggaatgaatg
    17341 atttaaaaga ttatttaaaa atcgttgcag cttatcgtgc gattttaaaa gatcttgaaa
    17401 agcgttttaa tgtgatttct gtgatacgct atatgataga aaattcaaat ttagttaaag
    17461 gaaataatga agaattattt agtgtaatca aacaattttt agaaacacaa ggatacaata
    17521 tcttaaatca ttatatcaac gaaaatgaaa ttcgagcttt cgttcaaact caaaatggct
    17581 tagaagaact tgtgatcaat gaagaacttt tcactcatcc actatatgaa gaagcaaatt
    17641 atatttttga taagattaaa gatagaggct tggaatttga taaagatatt ttagaagttc
    17701 ttgaagatgt tgaaaccaat gctaaaaaag gtgctactat acaacgctat aaaggtttag
    17761 gggaaatgaa tcctgagcaa ctttgggaaa ccacaatgga tccaagtgta agaagacttt
    17821 taaaaatcac tattgaagat gcacaaagtg caaatgatac ctttaatctc tttatgggtg
    17881 atgaggttga accaagacgc gattatatcc aagcacacgc taaagatgta aagcatttgg
    17941 atgtgtaaat ttatcattga agaaatgatt tcttcaatga gttttgtttt gtaagagtat
    18001 agctagagga attcttcttc ttgtatcgta tttttctcca taatattttt caagataatt
    18061 taaaattttt tcttcatctt caggttctat ttcccaaagt ccttcactat cttgcatcca
    18121 tcttatagct gctaaccaag cttttctact tgcatgcata ttggtaatga gattggatcc
    18181 atgacaagct aaacaatttg cttccactaa aggtgaatca ggatcgataa tcaatcctgt
    18241 atcagggtta atttcaagat tttgagccca acttgcactt aaaaacaatg ctaagatcaa
    18301 tatagttttt ttcatactta aactccataa acattaactc tatggcatgc attattgata
    18361 tatcctcctg gattccactg tgctaaaacc ataggttgac tgttaccttg actatcgata
    18421 gctcttgccc aaatttcata atatcctttt gttggtattg atatttgagc actccatttt
    18481 tgccatgcta atctatttaa tggtttttct acctttgctt tagcccatgt taccccataa
    18541 tcattgctta cataaacttc actaacttca agttctccag cccaagcttt acctctaact
    18601 tcaaattttt tatttgcttt tatttcagaa ccatttttga tattagtaat tacagatctt
    18661 ataggcattg attctatgat tttcatctcg cctttatagt taaaatctcc tggttttacc
    18721 ggatttacag gaactttata agaaccttcc attttttcac catcatgaat tttatttctt
    18781 actgaaattt tataaagcca tttaccgctt gtacttgcag ggtaaccacc acaaacaagt
    18841 ctaagtggat agccattgac taaaggaata tctttgcctt cataagccca agctattaga
    18901 gtttcatctt gtaaagcttt agaaatagga actcctctac taataggtga agtttcttca
    18961 ccatttaatt ttgtatctat gccataatat ccgatataaa ccgcatcatt tttgatacca
    19021 caatctttta aaatatcttt taaacgcact cctgtccatc taccgcaagc tactgcacca
    19081 taaccccatt gagttccttt tgtgctaggt ataacttcag atctaccatt tccaccgcat
    19141 tcaactgtta aggcataagt ataggtttta aatttctttt ttaaatcttc tatggtgtaa
    19201 gattttttat tgataatgct ttctccatcg atttctaaag tccaaccttt atgaagtctt
    19261 tcttttatcg tttctaggct tggtggtaag ccattatttc taacaaagaa attttcaggt
    19321 ttagtaaaat cagaatcaag agcataaatt tcagtttctg ctgttaatgg tttttcacca
    19381 tgatagataa gatctttttt accttctatt ttaaaatcag gcaattcttt tgccaaagcc
    19441 ttacttccta aaaaattctc aaaagaaaaa tttgacaata cactaatgcc aaataaacca
    19501 aatcctatat tttttagaaa gtctctacga ttttcttttt gatcgttctg t
//
LOCUS       DARBAC010000023        18792 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.023, whole genome shotgun sequence.
ACCESSION   DARBAC010000023 DARBAC010000000
VERSION     DARBAC010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18792
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.023"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            65..736
                     /locus_tag="SB799_000593"
     CDS             65..736
                     /locus_tag="SB799_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0867847.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDERRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            733..1968
                     /locus_tag="SB799_000594"
     CDS             733..1968
                     /locus_tag="SB799_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0867848.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNTYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAIQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLRSLEP
                     LKKLRRQVAEVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     SAILEEAKEHLMRDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            1968..2540
                     /gene="recR"
                     /locus_tag="SB799_000595"
     CDS             1968..2540
                     /gene="recR"
                     /locus_tag="SB799_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEG0867849.1"
                     /translation="MAKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCGQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(2537..3073)
                     /locus_tag="SB799_000596"
     CDS             complement(2537..3073)
                     /locus_tag="SB799_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HEG0867850.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCRQLEKNYKFTHPEFTLDFIDG
                     GTLALQLSYIIARYDRLIVLDCIEAQDASIGDIFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLTKEGFAYE
                     KIADFSLQELADISYKNY"
     gene            complement(3070..3762)
                     /gene="cybH"
                     /locus_tag="SB799_000597"
     CDS             complement(3070..3762)
                     /gene="cybH"
                     /locus_tag="SB799_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HEG0867851.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVMLGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKYIKEEKH"
     gene            complement(3773..5488)
                     /locus_tag="SB799_000598"
     CDS             complement(3773..5488)
                     /locus_tag="SB799_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEG0867852.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLTPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIV
                     VNYAKGNPNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGIGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDAKGNNLSEYK
                     VNVNL"
     gene            complement(5491..6630)
                     /locus_tag="SB799_000599"
     CDS             complement(5491..6630)
                     /locus_tag="SB799_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HEG0867853.1"
                     /translation="MIDYHQIESRLSALEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPDFWDTMGPFEEPMA
                     SRKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(6750..8591)
                     /gene="mnmC"
                     /locus_tag="SB799_000600"
     CDS             complement(6750..8591)
                     /gene="mnmC"
                     /locus_tag="SB799_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEG0867854.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLQTTPSKRPKKLFYISIEAFYIEKEQLREIYQKL
                     GFYEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDITILKELDFKADIWYLDG
                     FSPNKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKRE
                     MIKAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDVFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFA
                     HNDLMQERFDTQRENVLFKISKNQAFLEEGGVIFPKNLVKNLFEKSKACIYFNHEFQA
                     YKFENECFTLKFKNDIVKSDYAVLIYAMGADTKDFVFYDEMKLSKVRGQVTHLKPFLN
                     TPFPLSSKAYICPVKDDLQVIGASYDRLDASLESKEEDDKQNIENIAEFIDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEVFYKEEYKALLWTKNKEQKLAKISCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLYLEKKYIHAIHPARFLIRKLKKGL"
     gene            complement(8588..10567)
                     /locus_tag="SB799_000601"
     CDS             complement(8588..10567)
                     /locus_tag="SB799_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEG0867855.1"
                     /translation="MAKIFVFLVFVFTTLFGAYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFEGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKLIFSKETTSQKKTEQVSKI
                     SEKKQDQKTEIKTKALETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNKNLTLGFYAQTTNQNVNKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(10567..11658)
                     /locus_tag="SB799_000602"
     CDS             complement(10567..11658)
                     /locus_tag="SB799_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEG0867856.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRIGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(11655..12860)
                     /locus_tag="SB799_000603"
     CDS             complement(11655..12860)
                     /locus_tag="SB799_000603"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEG0867857.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(12872..15067)
                     /locus_tag="SB799_000604"
     CDS             complement(12872..15067)
                     /locus_tag="SB799_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEG0867858.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLARRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
     gene            complement(15051..15275)
                     /locus_tag="SB799_000605"
     CDS             complement(15051..15275)
                     /locus_tag="SB799_000605"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEG0867859.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            complement(15286..16005)
                     /locus_tag="SB799_000606"
     CDS             complement(15286..16005)
                     /locus_tag="SB799_000606"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEG0867860.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSIVKNN"
     gene            complement(16057..17250)
                     /locus_tag="SB799_000607"
     CDS             complement(16057..17250)
                     /locus_tag="SB799_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEG0867861.1"
                     /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSN
                     MEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQINKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRAIYAKKLDDLQAQ
                     QEELRKTLNQLKIINDKEDANSNKNDTKIVKNNQKIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(17247..18053)
                     /locus_tag="SB799_000608"
     CDS             complement(17247..18053)
                     /locus_tag="SB799_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEG0867862.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILITNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(18040..18705)
                     /locus_tag="SB799_000609"
     CDS             complement(18040..18705)
                     /locus_tag="SB799_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867863.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQAAKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
BASE COUNT         6239 a         3485 c         2411 g         6657 t
ORIGIN      
        1 caaattttaa ataaaattat gtaaagattt taaagactac ataaaaattt acaaggacac
       61 tagaatgatt aatgtgttga tgatagaaga tgatcctgac tttgcacaat tattatctga
      121 atatttagcg caatttaata ttaaaatcac aaattttgaa aatcctaaaa gtgctttaaa
      181 tgtgggtatt caaggctatg attgtctgat tttagattta actttacctg gaattgatgg
      241 tcttgaagtt tgtagagaaa tccgacaaaa aagcaatatt cctattatca tctcatcggc
      301 tagaggtgac ttaagcgata aagttgtggg gcttcaaatc ggtgctgatg attatctacc
      361 aaagccttac gatccaaaag aaatgtatgc aaggattatg agtcttattc gtcgcacaaa
      421 aagagttgaa cacactaata atgaaaatat taactctgct ttcaaaattg atgaaagaag
      481 acatgagatc acctatgaag ataaggtttt aacacttact cctgctgaat ttgaaatttt
      541 agaatacctt atccaacaac acggatatag tgtttcaaga gaacagcttg taagtcgctg
      601 taaaaatcta aaagataaag attctaaaag ccttgatgtt atcatcggtc gcttaagggt
      661 aaaaatagga gatagttcaa aatctccaaa acatattttt tctgttagag gtataggata
      721 taaactgata ggatgacaaa aaattattct attcatacca aactgattat tttatttgtt
      781 gttacttttt tcttggtttg tgtgcttttt atcgttcttt taaaaataga agggaatacc
      841 tataatgaag aagaaagttt aaaacaagaa aatcttataa aaaatttact catctcctat
      901 gaaaacactt caggtgttga aataggagct tatcttggaa acagcggttt taacgctata
      961 caaaatccca atcttgtaaa agctataaga aataatggac aatcactttt taaagcaggc
     1021 ggagagcttt gtactctttc ttctttaaaa tatcatagca atctttattt tgatgttcaa
     1081 tgtaaagatt ttgatggctt atatgaagaa aatactagcg atagggttta taatctttta
     1141 ttgataggat ttttctcttt ttctttgctg gttgttttta tgtatttttc ggtattaaga
     1201 tctttagagc ctttaaaaaa attaagaaga caagttgccg aagttgcaaa tggggaacaa
     1261 cctgattttt tagactatca agaagatgaa gtaggtaaga tcgcctttga atttcaaaaa
     1321 gctttcaaga aaaaccaaga attaatccaa tcaagacaac ttttcctaag aacaatcatg
     1381 catgagttaa aaacccctat aggaaaaggg agaatcattt ctgaaatgat caaagaagac
     1441 agacaaaaag aaagacttat cgctatattt ttacgcatgg attctttgat caatgaattt
     1501 gccaaaatcg aaaatttatt ttcaaaaaac tacaacttac actttaaacc tagtcgtttt
     1561 agcgctatac ttgaagaagc taaagaacac cttatgagag atgattttaa caaagtggta
     1621 aaagttgata taagatatga tgctttaatc aatgttgata tggaaatttt ctctgtaatt
     1681 ttaaaaaatc ttatcgataa tgccttaaaa tactcaaaca atggcacttg tgagcttttt
     1741 tgttgtaaag aatgttttac cattaaaaat ccaggcaaac ctttagcaga gcctatagag
     1801 cattatcttg aagcttttac aagagaaaaa cataatcagg tcaaaggtat ggggctagga
     1861 ctttatatag tttcagaggt atgtaaactg cataattttg atttgattta tttttatgat
     1921 gatggaaagc attgctttaa aattttcttt ggagataaag aaaaataatg gcaaaaggcc
     1981 tagaaaaatt caatgaactt gttgaaagtt ttgcaaattt acctaccata ggaaaaaaaa
     2041 ccgctataag gcttgcttat catctttgca taaataatca aatcgatggc atgaaactcg
     2101 cacacaatat agaaaatgct atccgcttta taaaaccttg tgggcaatgc ggtgctttaa
     2161 gcgaaaatga gctttgcgaa atttgtagcg atgaagaaag aaataaaaac attttatgta
     2221 tagttgaaag cccaaaagat atactaacac tcgaagagag tcaaagttac aatgggctat
     2281 attttgtttt agatgagtta aatgaagaaa aacttgaaaa actaaagcaa atcatactta
     2341 agctaaatat ctctgagctc atttttgcat tgacacatag cattaattct gatgcaacta
     2401 tcttttttat agaagataaa tttaaaggct taaacctaac ttttagtaaa atcgctcaag
     2461 gaattccaag tggtgtgaat ttagaaaatg tggatttaat ctctttaaat aaagctatga
     2521 attttagaac aaaaatttag taatttttat aagaaatatc ggctaattct tgcaaagaaa
     2581 aatccgcaat cttttcataa gcaaaacctt ccttggttaa aaaatcaagt aaagtttttt
     2641 ccatgatttt agctccttgt ataagctcat ctgaaagctt aaaactcatc gcttcaatac
     2701 gctttggcac acaagctaag atgtgtgttt taggcaaatc tcctgcaagt tccatgtatt
     2761 gtaaggtttg aagcatttct atttcatgag cacttccact ccagctgatt ttattaggca
     2821 tagcatcata aggaaagaaa aatatatctc ctatactcgc atcttgcgct tctatgcagt
     2881 ctaaaacgat aagtctatcg tacctagcga tgatatagct aagttgcaaa gctaaagttc
     2941 caccatcaat aaaatctaaa gtaaattcag gatgagtaaa tttgtagttt ttttcaagtt
     3001 gtctgcaaag atgaacgcct aagccttcat ctgcaaacat gatattgcct attccaagga
     3061 ctaagaattt caatgctttt cttcttttat atatttatat ccgctaataa tagcatccat
     3121 agcaccatct ttacctttta ctgcgttaaa aatcgccata taaatatgta ctggtacaaa
     3181 aatcataatc acccacatca aaattctatg ataagttctt acatcagcca agccacccat
     3241 tgcagcttca agcggtctta aaatatgata taaaagccca cctaagccct catgataagt
     3301 atgagtataa agaataagcc ctgtaagaat gatacctaac atcacaagat aaaagaaaaa
     3361 ataagttaca aattgcaaag gattataaac cccttttaaa tgcggatgtt ttcctaagaa
     3421 aatgtaaaat tttacttgtt ctatccataa tttgatatta aaaatatccc atacacttct
     3481 gcgttctttt gcgcttacct tatcgcagaa aaacaaatat actttaaaaa taatacaagc
     3541 gattaaaaca aaacccaccg cttgatgcac taagcggtat tttgcttgca taaaatttac
     3601 gggttcgccg ttgctaatag gactttgaaa cacataagaa agataatatc ctgtgccaat
     3661 aagaatcact atagcaatag ctcttaccca gtgcgttaaa cgcaaaccta tgctaaattc
     3721 atattcagct tttctttgca atttttcttc tttgttttgc atgaaagcct ccttatagat
     3781 tgacattcac tttatattcg cttagattat tgcccttagc atccattaca tgcaccgcac
     3841 aagcaataca aggatcataa gagtgaattt ttctaatgat ttcaagtggt tgttttacat
     3901 cagcgatttt aagtcctatc aaacattgct cataacttcc acctatgcca tttgcgtctt
     3961 ttggacttgc attccaagta gaaggcacta cagcttgcca gttttcaatg acgccatttt
     4021 taattctaca ccaatggctt aatgttccgc gtggcacatg ccccatatag cgtcctttat
     4081 attctttaga attatcaatc acataaggag cacaagtact ctgatctact tttaaatttt
     4141 caactaaatt attaaacgct tttaaagcat tatttgcaac gatttttgct tcaatacaac
     4201 gcgcagctgt tcttccaagt gtgctaaata cagcatttaa aggaagtcct gtttctttta
     4261 agaactcatc tactacagga acaacatttg gattaccctt agcataattt acaacgatat
     4321 ttgctaaagg tcctacttgc atagggtttc cttcatagcg tggagcttta atccaactat
     4381 atttaccctt agtatcaaac actttagaat ggacattatt tccatgatga tctacgcttt
     4441 ctccatctac aagtcctgta taatttggat ttgttttgcc atcataagga tgtaaaggtt
     4501 cattgtctgc ataccaagaa tgagttgcct cttcggtaat cttatcttct tctacttcat
     4561 aaaccttgct taaatctcca tttttgataa taccactttc aaaaagccat tcatctcttc
     4621 cgatttgaaa ttctttaaag gtgtaaagat tatttacccc tatatcattt aaaacacttg
     4681 cttcatgtgc ataagctttt cctgccatca caagatcagg ataatacgca cgattaacaa
     4741 agtcttgcac ttcttggaat ttaaccatat attcacccat tcttgcagga tcaagtaaat
     4801 ccataacgca agttacacca ccaacagtta agctttgtgg atgtgggttt ttagctccaa
     4861 aaatcgccat acattgagca atgattcttt gaattcttaa acattctaga tagtgagaaa
     4921 gaacaattaa attttgctca ggagttaaac gataagttgg atgaccatag tacgcattag
     4981 caaaaggtcc taaatttcct ttatctacaa aagttttaag tctttgttgc acttcaagaa
     5041 gtttatctgc acctgttgca taaggatttg aagtgtattt aaaagcttca tcgcttgctt
     5101 ttttaacatc agcacttaaa gcacttacca catcagccca atcaagccca tgaagttgat
     5161 aaaaatgcac aatatgatcg tgtaaaaata aagctgcatt cattaaagtt cttgttaaaa
     5221 gcgcatttaa aggcggagta atacctaaag cattttcaac agcaactata cctgctttat
     5281 aatgtgaaaa agtacaaact ccacaaattc tttgtgtcat aaaacccgca tctcttggat
     5341 cacgcccttt tactatggtt tcaataccac gccacaaagt agagcccgca taagcttctt
     5401 ttaccacatt attatcatca acaacaactt caactcttaa atgcccttca attcttgtaa
     5461 taggatctac gattattttt tgactcattt ttattcctta tctttttgca tggaagatat
     5521 cactgcgtgt gctgctatag caacgcctgt aagtgtaagc acacctatgc cgattttatc
     5581 tgaaacacta tccgcaccca agccaaaaac agtatcaaat ttacgactag ccataggctc
     5641 ttcaaaaggc cccatagtat cccaaaaatc aggctcagaa caacctatac aaccatgtcc
     5701 tgcttgaata ggccaagaag tgtgctggtt aaatctctct cttgagcagt tattaaaagt
     5761 ataaggccct ttacaaccta ctttataaag acaaaaacct tgttttgctc cttcatctcc
     5821 aaaagcatgt acaaactcac ccgcatcaaa atgtccgcgt ctttcacaaa gatcatgaat
     5881 tcttagacca taagcccatt ttggtctatt atacacatca agtgctggta actcaccaaa
     5941 taataaataa tgaagcacat tacccactat atttttttca cttggaggac agcctggaac
     6001 attgatcaca gttttgcttg ttactttgct taaaggctgt gcgttactag gatttggtct
     6061 tgcggcttgg attcctccaa agctagaaca ggttcctata gcaaaaattg ccaaagcatt
     6121 ttcacttgcc atttttgaga gctcatagcc tgtttttcca tgtgcaccta tggttaaaaa
     6181 atgctctgta tcacccatag ggataccacc ttcaaccatt aaaatgtatt tatttttatg
     6241 cttttgaatg gcactttcta aattttcttc agcttgccaa cctgctgcag ccatcactgt
     6301 ttcgtgatat tctaaagaaa tataatcaaa aatcaaacta tcaatcgttg gagtatcact
     6361 tcttaacaaa ctctcgctac agcctgtaca ctcagccata tgaagccaca caacaggaag
     6421 cctatcagca agctcagcag cttttgccac cataggagta aaactcgctg gcaaagccaa
     6481 aaatgcagtc atagcacctg cccatttcat aaaatccctt ctagaaaaac ctgacttttc
     6541 taatgctttt gtaatactat cattgtcttt caaagaagga agcttttcaa gagccgataa
     6601 acgcgactct atttgatgat aatcaatcat tatatttcct ttataacatg aaatttattc
     6661 tctataataa taaaataaag gaagttaaaa taaagttaaa aacttactct cataagcaaa
     6721 tattagtatt actcttaatt aaagcttaat cataagcctt ttttgagttt tcgaatcaaa
     6781 aatcttgcag ggtgaatagc gtggatgtat tttttttcta aatacaaggg ttcattattt
     6841 atcaatgcac acaaatacct tgccgctaaa acacttgtgc taaaacccct tgatccatga
     6901 gcaaaattaa aatacaaatt acaagatatt ttagctagct tttgctcctt gttttttgtc
     6961 cataataaag ctttatattc ttctttataa aacacttcat cataggcatt tccaactatc
     7021 ataaagcgat cactcgaata agatctaaag cctaccttag aacctatgat ttctaatttt
     7081 gtatttttat ctataaattc ggctatattt tctatatttt gtttatcatc ttcttctttt
     7141 gattctaaac ttgcatcaag cctatcataa cttgctccaa tcacttgcaa atcatctttt
     7201 acagggcaaa tataagcctt agaagataaa ggaaatggag tatttaaaaa aggttttaga
     7261 tgtgtaactt gacctcttac tttgcttaat ttcatctcat cataaaaaac aaaatctttt
     7321 gtatctgcac ccatagcata aatcaaaacc gcataatcac ttttaacaat atcattttta
     7381 aattttaaag taaaacactc attttcaaat ttataagctt gaaattcatg attaaaatat
     7441 atacaagctt tacttttttc aaaaagattt ttaaccaaat tttttggaaa aatcactcca
     7501 ccctcttcta aaaaagcttg attttttgaa attttaaaca aaacattttc tctttgtgtg
     7561 tcaaatcttt cttgcatcaa atcattatgt gcaaactcca ccacaccctt aaattctaaa
     7621 tctaaaattt gtctataaaa acggcttgct tctataaaag aaagctctga aaactcccct
     7681 aaatttacct taggttttaa gattaaagag cttaaaattc cactttcatt tccacttgca
     7741 cccttgccta attctaaatg tttttcaaaa acatctatct caaaacctct taaactaagc
     7801 tcataagcta aaacagcgct tgatatacct gcaccaataa tagctacttt tttatttttt
     7861 aaagatgaaa atgttcttga aaaatacgct tctttgtctt taaactcaag ctcattttcc
     7921 aaataagctt taatcatttc tctttttcta aaacctttgg ttttttctac tctaaagcca
     7981 tattttttta aatttttttg taaaaaactt gccgaagaaa aggtacaaat ttgtgtattt
     8041 tttttagaaa gtcttgccac ttcaaaaatt aaattttcat caaacatttg cgaattttta
     8101 tttggagaaa atccatctaa ataccaaata tcagctttaa aatccaattc ttttaaaata
     8161 gtaatatctt caaaaacaag atctaaaaaa cagtcttcaa aataaaaacg ataaatccct
     8221 tctttagctt taggataaaa ttttaaaaat tgttctaaaa gctctttaaa ctcttcataa
     8281 aatcctagtt tttgataaat ttctcttaat tgttcttttt cgatataaaa agcttctatg
     8341 ctaatataaa aaagtttctt aggacgctta gaaggagtag tttgtaaaaa gcgcttcaaa
     8401 gtaagaaaaa aatttaaacc tataccaaaa ccactctctg cgataatgaa attttcttga
     8461 tttttccatt caaaagaatg agtataaaca aatttacttt catttaaacc atctttggaa
     8521 ttaaaataaa aatcatcaaa atccaaagaa aaaggagtat tatctttaaa gattaactta
     8581 gcttttttca tcggttgtta taaaaataac tctcaactcc atcagcaata cccttaacca
     8641 ataaatcttg aaaagcttta ttggcgattc ttttgccttc atttggatgt gtgatatagc
     8701 caatttcaat caaaattgca ggcatttgcg cacctactaa aacccaaaaa ggtgcttctc
     8761 ttacaccgcc atctacgatt ttatactttt tgcgtgtttg agtgagtata tttttttgta
     8821 catcaatggc tagtttattt gaagcaacga ttttttcacg atttaagaaa tttaaaatac
     8881 tttgttttga gaaataatta atctcttcaa aatctccttg attttctttt tctgctgcct
     8941 ttttacttct ttcacttctt gcaggactta aaaagaaagt ttccacacct tcactacttt
     9001 tggcttttgt ggcatttggt gctgcattag catgtataga aataaacaaa tccgctcttt
     9061 tatcattggc atatttagtt ctatcacgaa gattgataaa tttatccgaa cttctagtat
     9121 aaagcacttt ataaccgcgt tttttaagtt catttccaag ttttaaagcc gtgcttaaaa
     9181 ctatatcttt ttcttttaag cttccttttt tatcacttaa ggcaccgcta tcttttccac
     9241 catgccccgc atcgataacc acaagctttc ctgatttgta atttgtattt aaagttttac
     9301 tagaactttg agttgctttt ttgtttacat tttgatttgt agtttgtgca taaaaaccta
     9361 aagtgagatt tttattatcc aactccttta agagtttaaa ttctttagga gcactcaaaa
     9421 ccacacgaac agtttttgga ttgtattgag taactgtaat cacattttgt ccaaaagtaa
     9481 agctttttct attaccttct aacacaccct taaaacttac aacatatcgg aatttttgat
     9541 ctttggtatc aaatactgct atttcttttt catctaaatc atcgcttaaa tttaacacca
     9601 cagcattaga aattttatcc acatctaaaa catataaagg ctcttgattt tctttttcgt
     9661 tattggtttt tttatcttgt ttttttgttt ctaaagcttt ggttttaatt tctgtttttt
     9721 gatcttgctt tttctctgaa attttactaa cttgctcagt ctttttttgg ctagtagttt
     9781 cttttgaaaa aattaatttt tcttctttaa aagatatatc aataggaatt ttttctttag
     9841 cataaaccac tatgcgtatg gttttgggat taaattgtga aatcactaaa cgatagtcat
     9901 caaatttaaa ctctttttta cccccttcta aaaccccctc aaaatcacta ataaaacgat
     9961 agtttccttt ttcgtctaaa gcaaaacttt ttaattgatc cttatccaaa tctgcattta
    10021 gttcaaactc tacaccttgg tttgttttac ttgactttaa aacataaatt ttatcatcgc
    10081 tttttgcttt agaaacgata ctactctttg gtgcttgcga agttttagaa tttgtttttt
    10141 ctgtattttt tatttgttcg ttagatgatt ttttttcatt tttttgaact gtttttatag
    10201 gttcaaaagt tgatttttca gtatcttgag aaatattttg aaccttaata tctttaataa
    10261 cagcctttct taaagcatta atacttgctt cacttatacc actttctttt aactcattag
    10321 catatgactt gtcatctaaa tttaaagtat ttgaactgat gatcaatctt tttaaaattt
    10381 caattttagt tttttcatct tcattaataa cactttgtat ataaaggctt ttgagctgat
    10441 ggtgaaattt tacttgtact tcacttttag aaccgataaa atttttatcg aaatttgcaa
    10501 gttcattttc ataggctcca aaaagagttg tgaaaacaaa tactaaaaat acaaaaattt
    10561 tagccattat tcaccattaa ccaatttttc cataagttct ttaacactga taagcttatc
    10621 taaacgatat ccatttgcac ctgtaaagaa aagccctgtt tcttttttac ctgaccacgc
    10681 atcaaaaagc ctatctgcta tacaataccc tactttagtt gcctcttttc cgcgtccaca
    10741 aggcgctaca caattgctta tacaattgat ctttggacct attcttttat ctaccaaatt
    10801 taaaagattg gttctaaccc cacgtgcagg atagcccaca ggagatttaa taagctctat
    10861 atcttcttct ttagaagcta gtaaaacgct tttaaattct tcgcttgcat cacattcaaa
    10921 agttcctatg aaacgcgttc ccatttgaac accactagcc cctaaagaaa tagcgttttc
    10981 tatatctttt ttatcccaaa ttccacctgc agcaatcaca ggaaaagacc cccaattttt
    11041 agcctcttct accacaggag cgattaattt ttctagctga taatttggat ctaagcactg
    11101 ctcataagta aaaccttgat gacctccact ttttggccct tctaaaacca ctgcatcagg
    11161 caagcgattg taacggcttt gccatctttt gcaaataatt tttaaagcct ttgcagatga
    11221 aatgataggc actaaagcca catcaggaaa atctgcagta aattcaggta aatttgtggg
    11281 aagtccagca cctgaaacaa tcacattaaa accaacttca caagcatcgc gtgctattct
    11341 tgcataatca ttacttgcac ataagatatt acaccctaaa ggtgcatcgc cacaaacttt
    11401 tcttgcatta ttaatcaaag cttgcaaacc cttgcgtgag taaaaatttt cacttccata
    11461 aggcttagca tttaattctt tacttgcata ctttctttct tcataatatc ctgttcccac
    11521 agaagaaatg atcccaagtc caccatttaa agaaactgca gaagctaatc tatcccagct
    11581 tatgcctagt cccattcccc cttgaaaaat gggatatttt atagtatgtt ttcctatttg
    11641 taagggttgt aaattcattc ttttaccttt aattttgcaa attttctttt acctatttgt
    11701 aagatgtatt ctccttgttc taaatgcatt tgctcgtcgc taactttttg agaatttaca
    11761 cttactgcat tagcactgat gcttcttctt gccgcagaag tagaactttc caaaccacat
    11821 tcaaccaaag ccttagcaag ccaaattttt ccttgtattt caaattcagc catatcactt
    11881 ggtaaagcat tttgagaatg aatcctatca aattcagact tagcattatt agcctcttct
    11941 ttggagtgaa aacgctccgt aatctctaaa gctaaatttt ctttagcttt tttaggatgt
    12001 aaattgcctt gttctatatc tttttttatt tgcgcgattt cttctagact tttttgactt
    12061 aaaagttcat aatatctaaa catcaattca tcactaatac ttaaaatttt agcatacata
    12121 tcattagctt tttctgtaac accaatgtaa ttatttaaac tcttactcat tttgtttaca
    12181 ccatctaaac cttcgagtaa aggcatcata atcacagctt gttcttttcc tatattataa
    12241 accctttgaa gctgtcttcc cattaaaaga ttaaattttt gatccgttcc gcccatttca
    12301 atatcgcttt ttaaagccac gctatcatat ccttgaagta aaggatacaa aaactcgcaa
    12361 atcgaaatag ggctttgctc tttaaatctc ttggtaaaat cgtcacgctc aagcattcta
    12421 gctacactaa aagttgaagt aagctctact atacccgcag ctccaagttc attaagccaa
    12481 gtagaattaa acttaatctg tgttttttct ttatccaaaa ccttaaaaac ctgcgtttca
    12541 taagttttag cattgattaa aacttgctct ttatccagct ttttacgcgt tgcacttttt
    12601 ccacttggat cgccaatttg tcctgtaaaa tccccaatca aaaattgcac aatagctcca
    12661 tgtttttgca aaaaagccat ttttgttaaa accacgctat gacctaaatg taaatcaggt
    12721 gctgtaggat caaaccctgc ctttatgaag aaattttcac ccttttcata ataattttta
    12781 attaaatttt ctattctttc ttcatcaata agctctgcac agccacgctt aacttctgct
    12841 aatatttttt ttatatccat aataaacctt tttaaccttc tttataagca tcatttaaag
    12901 atgtaaaatc taaaatttta caacgagatt ttaacctatc cttgacacta tctgggttga
    12961 tattatcagg aatttccatt gtaatctcaa aataatctac cgccgaattt aaatcacttg
    13021 ataaattaat tgttaataaa tttatctgca ttttagctaa aaatgccaaa aattccgcta
    13081 aaacaccttt tttattttcc aaagaaaaaa tcaatttata agatttaggg atgttagaat
    13141 cccattttat aaataccata tcttgattat tatctatcat tttatcagct ctatcgcaaa
    13201 gcttatgatg gacaatagcg ttaccacctt taacaaaagc taaaacagca tcacctcttt
    13261 ttggatggca acaaaaatca aaatccacat tagcgatttt atggttgcaa tatagagtaa
    13321 aatttcctat tttttgttct ttaatctcat atttatcaaa ccaatatgac ttcttggcgt
    13381 attttttaag accattaact atatctttta aataagcact atctgttgct acttgtctaa
    13441 tacgtctggc taaattttct ttttctatcc aagtttcaat tctgttttta tcaactccaa
    13501 aaataaaact taacatatta atagaacttg ctagattaat ctctctgatt ttttgcttac
    13561 aaaattccct tatacttgct tttgcttttc ctgttttaac actatctatc caagaacagc
    13621 gataaaattt atcattacta gtaaccactc gcacaatatc gccattttta agctcggtta
    13681 acaaaggtac tttaatacga tttacataag cactttttgc atgaagccct actttggtat
    13741 gcacttcata ggcaaaatca agaaccgttg caccacgagg caaagtgaaa atttctccct
    13801 taggagaata aactgcgaca tcttcaacat aaagactatc tttagcatat tcataaagtt
    13861 caatagcatt ataatcttct gcattttcaa gattgtttat actttgcatt gaaatatctg
    13921 taagccaatc aagacgaggc gcaaccacac tgccatcttc tttatatttc caatgcgctg
    13981 ctataccaaa ttccgcaatt ttatgcatat caaaagttcg aatttgtgct tctataatac
    14041 ttttagcatc aaaaagtgtg gtatgtatgg tttgataacc attttgttta ggcaaggcta
    14101 tataatcctt aaaacgcgaa accaaggggt taaaatgtgt atgtaaaatt cccaaagcta
    14161 aataacaatc acttactttt tcaaccaaaa ttcttacccc aagcaaatca agaacttctt
    14221 caataccaat gccttttctt tgcattttaa gataaataga atagctatgt ttaatgcgtt
    14281 tttgaatttc aaaactacct tgtctaaagc cattgctcaa aaataaaagt tcgattttgg
    14341 aaataaattc atttaaacct aattgcattt cttgattatt ggagttgata taattgtcaa
    14401 taagcttata ctcatctggc ataagatatt taaaactaag atcttccaaa taatttttta
    14461 tgcttgaaat accgagtcta tgggctattg gagcatatac aactaaagtt tcttcgctga
    14521 ttcttttttg cttatcttct cttagaatat caagagtaag catattatgc agcctatcac
    14581 ataacttcac aatcaaaacc ccaacatctt caatgcttgc taaaagcata tttctgaaag
    14641 tcaaggctga tttagttaaa ctttttttag attttgatga aatgagatta tcttctctaa
    14701 tttctataat tttagtaagt cctaaaacaa gttttaaaac ctcagaacca aactgctctc
    14761 taagttcttc ttcagtgcag tttgtatctt caatcacatc atgcaataaa gcagctaaaa
    14821 tattgctttt attttcactt aaaaatccaa ccagtgttgc cactaaaata ggatgtaccg
    14881 cataaggctc tccacttttt ctaaactgcc cttcatggca aaatatacag taatctaccg
    14941 ctttttcaag aatggcatca tggccacaaa tttcgaaaag caaagcctta gcagcttcta
    15001 aatctttaca attttttaca ttatcgatta attgttcaag caataattct tcatcgattg
    15061 gtttcaacta aaccctctaa agtgatttta ttttctgcaa tttcatataa agctatatct
    15121 gcaagtttat ttttattttt atcaaagtct accaaagggg ttgctccatt tgccaattgt
    15181 tccgctcttt ttgctaccac taaagaaagg cgatatctat cattacccat tttttccaaa
    15241 gcttttgccg ctacttcttc tattctttta tccataattt tctccttaat tatttttaac
    15301 gattgaacaa aggctagtat caccttgtat gattttaagt aaattaccct cttcaaacat
    15361 attacaaacc acaataggaa gtttgttatc tttagctaaa gctatagctg tatcatccat
    15421 cactttaata ttatcttgca tagcctcatc ataacttaaa gtatttaaaa atactgcatc
    15481 atcaaattgt tttggatctt tatcataaac tccattaact tttgtagctt ttattaccat
    15541 atctgcatca atttccacag ctcttaaaat agctgttgta tctgtagtaa aataagggtt
    15601 tccagtacct gcggcaaaaa ccacaacacg acccttttct aagtgtcttt gcgctcttct
    15661 cataatataa gtttcacaaa atgcttccat ctgaatggcg ctttgaaccc taacttcaag
    15721 tccagagctt tctaaagctt cttgtatagc aatagcattg ataaccgtag caagcattcc
    15781 catatgatct ccacttgtcc ttttaatcaa tccgccctta gcagcactta ctccgcgaat
    15841 aatattacca ccgcctataa ctatgcctac ttctatttga ttttttataa gttctttaat
    15901 ctctgaagct atgaatttta aaatagaatt ttctatacca aagccatttt cacctgctaa
    15961 agcctctcct gaaaatttta ctaaaactct ttttctctct tgcattattt ctccttattt
    16021 aacttgaaat tatattttaa attccattaa atttagctaa tttaagctaa tgagttccaa
    16081 aggattgata tgaaaatttt tttgagttac ttcaaaagta agatcatttt ttattctacc
    16141 cactacggca ccttttttaa tattcttacc aactttaata ttaggagcaa tcttatctaa
    16201 atgtgcgtat attgtatgta tgccattatc atgttcaaca ataacaactc gagctaacat
    16261 actagtatct ttggcaaaaa ctatttttcc atctagcaca tttttaacaa ctgcatcgct
    16321 tttattgctt cttaaaacta cattctcgtt aaaaatttta agattgtaaa caggatcaac
    16381 ataatttcca aatttttgct tcacagtaaa agaatccaat ggagctatgg ttttttttcc
    16441 tgtgtaacgc ttgactgaac ttccttgata gcttgaacct aattgtctta ttttttgatt
    16501 attttttact attttagtat catttttgtt tgaatttgca tcttctttat cattaataat
    16561 ttttaattga tttaatgttt ttctaagctc ttcttgctga gcttgcaaat catcgagttt
    16621 ttttgcatat atagctcgat ctgttttttg tttattaatt tcgctaattt gtttttgttt
    16681 taaactttga agcttggcta attgagcgtt gtaatcctta agactttcat taattttatt
    16741 aatctgagct tgtttatcat caataagcct gcttactccc tcataatctt tagaaatttt
    16801 aaaaatttct tcatttaaaa ctttgtttaa acttcctaaa atttcaaaag ccataaaact
    16861 ttcttcactt tcaatatagc cttgagggat aggtaaatca taagcaaaat ctttggccat
    16921 taaagatata agcttacctt ccatatttga tttactttta agcaaatctt cattttggct
    16981 tgtaagggtg tttaactctt gattttgagc cttagcactt gcttcaagct tagaagtttg
    17041 tgaatttaag ctttcaattt gcaaacttag atctttcaaa cttttttcac catttaaaat
    17101 gtcgctagcc aaatcttcaa gttttttatt taactgttct tgtatgcgtt tattttcttc
    17161 taaacttttt gttttttcat ttatagcgtt tgctaaactt atatcaacaa acaaaaaaaa
    17221 acaaaaaaag ataagaatat tttttctcat cttttaacct taaacataac cgtatttaca
    17281 cacaacaagc aaataaacaa agtagctaaa aaaattaaag tcaaatgtaa aataaaatta
    17341 ataggtggaa aaataatatc tacagccttt aaactttctt ggataataga aagatcaaaa
    17401 atttgggtaa aaaaggcaag taaaataaca aaagcaataa aacaatcaac cacaaccacc
    17461 ttataaagca taaaagatct aaaccaaaac ggagctccaa ataaacacat aatttcaata
    17521 cgatcggtat gttcataaag ccaaattctc atctgtttta aaaacaaaac aaaggcaagt
    17581 aaaataatga taaacaaaaa taaccaaaaa acaaatttca tcaaaataag caaagagtat
    17641 atcttatcat gggttttgga aaaagtttca accttactaa cacctacaat atttaaaagt
    17701 tgatttttaa tcgaatttag ttcattttga tcgggtaaag aatttaattt taaagtataa
    17761 aattttggca gagaatcttt taaaactttc aaattctttt cagaaacatc atttttcaaa
    17821 cgatcgatta aatccttagg atctaaagat tcaagtccag caaaaaatgg tacttttgtt
    17881 tttactacat tctgatcaag ttcagttttg ctgacaacta taatattata atctttatta
    17941 acaagttctt cataatgctt taaagttgca tttgtaatca aaataaattc aaaagcaaac
    18001 atcataaaaa gtaaaggtaa aattaaagat aaatgtgttt taaaaaattt cattcatttt
    18061 tccattttct atattaaaac gacgataatc cactcttaaa ttactaggaa ttctatgtgt
    18121 taccactata acacaagttc ctaaaagctc tctagcagat tttaaaagag tccatataat
    18181 atcagaagaa tactcgtcca aatttcccgt tggctcatcg caaagcaaaa gctttggatt
    18241 atgagctaaa gccctagcca tagcgacgcg ttgttgctca ccaccgctaa gttgattagg
    18301 caatttatct gctttaaaag ttaaatttac atgctttaaa agcttagcag cttgatcatg
    18361 gcatactttt ttgctataac ctttaatcat taaaggcaac ataacatttt tttcaacact
    18421 atattcttgt acaagtttat aatcttgaaa aataatccct attctttgac gcaattttaa
    18481 aagttctaaa tttccaattt tattcatcaa agatccacat acttcaagct taccagaaat
    18541 aggttctaaa tctccataaa aagactttaa aagcgtactc ttaccactcc cacttttacc
    18601 cgtaataaaa acaaaatcat catccttaaa agcaaaactc gcttctttaa taactaattc
    18661 atcataacct aaagtaagtt tatttgcttg gattaaatta ggcatccttt ttccttaatt
    18721 tcccttttta aatttttaaa ttatgcttta tttttgctta attttcaaga aaaattatat
    18781 tttaaactga ac
//
LOCUS       DARBAC010000024        18271 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.024, whole genome shotgun sequence.
ACCESSION   DARBAC010000024 DARBAC010000000
VERSION     DARBAC010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18271
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.024"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1513
                     /gene="kdpA"
                     /locus_tag="SB799_000610"
     CDS             <1..1513
                     /gene="kdpA"
                     /locus_tag="SB799_000610"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
                     /protein_id="HEG0867864.1"
                     /translation="SLHLIAFNALVAIFSFVIFYLQDKLFLNPNLINSMKGDLNLNTV
                     ISFITNTNLQHYSGESALSLLSQNTGILLAMFVSSASGYSACMAFCRALCGMQMGNFY
                     EDFTRIITRLMLPLSFILAVIFISEGVVQNYHANFSVLTLENKFQSIATGPVAALESI
                     KHLGTNGGGFFGANSSMPFENPTSLTNFLQILSMMLIPSACVVAFGLMVYHRKERQGF
                     ALMGKEGGVIFGAMGIIFIISLLLIYFSEKMSNPNLDSLGLNANLGNLEGKEIRFGTD
                     GSSLFSAVTTAFTTGSVNNMHDSLNPLSISATLLNMMLNVAFGGEGVGLMNMIIYVLL
                     TVFICALMIGRTPEFLGKKIESAQMKLIALVILIHPLLILVLSALAVVFAKDSISNPS
                     FHGLAQILYEFSSSAANNGSGLEGLKDDNLFWNLSTAFAMFCGRYLVLIAQLAIAGSL
                     LAKNTQENTANSLKTDNLTFMFVLVCIIYIFTALTFFPVLTLSSVAEYLSLWH"
     gene            1523..3568
                     /gene="kdpB"
                     /locus_tag="SB799_000611"
     CDS             1523..3568
                     /gene="kdpB"
                     /locus_tag="SB799_000611"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEG0867865.1"
                     /translation="MSKKQNKLITKEILNNAIKGAFLKFDPRFMVKNPVMFMVEVGLI
                     LTLILSIFPTLFNGNSDERIYNILITFILFITLLFANFAESIAEGRGKAQAATLRQSK
                     KDSKARRIKSDGSEEMLNSSELKIGDIVLVKAGELIPNDGEIIEGAASVDESAITGES
                     APVMREAGGDFSSVTGGTTVLTDFLKIKILVGAGESFLDKMINLVEGAARQKTPNEIA
                     LNTLLIVLSLSFLVVVVSLYLFMQFLGVSLPISWLVALLVCLIPTTIGGLLSAIGIAG
                     MDRVTRFNVIALSGKAVESCGDVDTMILDKTGTITFGNRLANEFYEVQGISKEEMIKA
                     CVLSSLKDETPEGKSIVALAQKMGYELEGNDIKEFIEFSAQNRMSGVDLQDNTKIRKG
                     AFDAIRAYISEMNGKIPSDLETKVMEISNLGGTPLVVCKNEKILGVIYLKDTVKPGLK
                     ERFDELRKMGIKTLMCTGDNPLTAATIAKEAGLDGFIAECKPEDKIEAIKKEQAQGKI
                     VAMTGDGTNDAPALAQADVGIAMNSGTQAAKEAANMIDLDSNPTKILEVVEIGKGLLI
                     TRGSLTTFSMANDIAKYFTILPAMFSVVLPQMQILNIMHLATPQSAILSALIFNAIII
                     PLLIPIAMRGVKFKPMKSEHLLLRNLSIYGLGGMIAPFIGIKIIDIPTAWILRILGV"
     gene            3570..4178
                     /gene="kdpC"
                     /locus_tag="SB799_000612"
     CDS             3570..4178
                     /gene="kdpC"
                     /locus_tag="SB799_000612"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HEG0867866.1"
                     /translation="MLRTLLSFFVVMLILCTLIYPFALNTVAKFIFPYQSSGSLVDKE
                     GRPTLDISKAVGSKLLGQDFNKPYFLHSRASVSNYNTSDTNESSVSSGGFNYAMSNPA
                     LKERVQKDLQKFLDENPQITKEQIPLDLLSASGSGLDPHISLQAALVQIPRISQSSKI
                     TKEELEKIIQENTESKFLGIFGEEKVNVLAVNIAIAKAMKKE"
     gene            4181..6112
                     /locus_tag="SB799_000613"
     CDS             4181..6112
                     /locus_tag="SB799_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HEG0867867.1"
                     /translation="MQRQSPEQILKKLEVKAKEEEKNKLAKLKIFLGYAAGSGKTYAM
                     LSEARTLRDNGVDVVLGYIEPHDRPETMALTQGFESIANLEIPYKNIVLKEFDLDATL
                     KRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANI
                     SKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERL
                     IALREIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALA
                     FHAKLSALYIKNPNIKEEKALEENIELAKSFDAEIISVYDDDIARQIAEYSSLSNVSK
                     IVLGKNKDKKKFKEEIFEAVAKKAPNIDLYLVNENQISTPKIRSKKGFDFLGFLKITG
                     VLLLATFIAFVFHKFNTQPSNIVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFF
                     LEPIFSLKVHDSGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSEK
                     LARVKSKQELWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSAD
                     EIAIAQWVATNKERAGVCTNTLPNANAMYLPIEDGEKTKGVIGIVLKEKRPLQDFQYE
                     ILSALLNEAGVRTRDIFLL"
     gene            complement(6107..8080)
                     /gene="uvrB"
                     /locus_tag="SB799_000614"
     CDS             complement(6107..8080)
                     /gene="uvrB"
                     /locus_tag="SB799_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEG0867868.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNIPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSTTASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKDRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQMAYNKKYNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKL
                     VKELRKQMLEAAKALEFEKAAAIRDEINKLRDL"
     gene            8234..8464
                     /locus_tag="SB799_000615"
     CDS             8234..8464
                     /locus_tag="SB799_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867869.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            8454..8696
                     /locus_tag="SB799_000616"
     CDS             8454..8696
                     /locus_tag="SB799_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867870.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            8693..9130
                     /locus_tag="SB799_000617"
     CDS             8693..9130
                     /locus_tag="SB799_000617"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEG0867871.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            9112..10965
                     /locus_tag="SB799_000618"
     CDS             9112..10965
                     /locus_tag="SB799_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEG0867872.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKN
                     LKAIVLKECQKPDFKTVEIKEITKYFLTPLQFELANFIVYYYASKLGFVLGFFETSPK
                     YECQKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMKKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIKVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFR
                     QIICKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNTILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IEDYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKNAQKLCEKLAYQFKNIKQVELV
                     GYGICGVEMLHGKYRFYLLLRSENYKALVAIENYILQFKNVSADIDPIDFI"
     gene            complement(10958..11716)
                     /locus_tag="SB799_000619"
     CDS             complement(10958..11716)
                     /locus_tag="SB799_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP:phosphoglutamine cytidylyltransferase"
                     /protein_id="HEG0867873.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFILKCIEEKQ
                     DLIISYADIVYFQDCVQKLINAKEELAIVVDKSWRKLWNKRFANPLEDAETLKMTNGY
                     IIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGNWCEIDFMSDLKINFI"
     gene            complement(11718..12320)
                     /locus_tag="SB799_000620"
     CDS             complement(11718..12320)
                     /locus_tag="SB799_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEG0867874.1"
                     /translation="MFIGITQRLIYNESYHEERECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSHYKHLIKAVILSGGNDLSFYSPNVLSKKRDLYEKQVIEICLKEKIPLLGICR
                     GAQMIAHYFNSHISPCENHIGKHEVFFSKEKFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYENIFGIMWHIERENGLNNIQILKEWFSLIKE"
     gene            complement(12311..14650)
                     /locus_tag="SB799_000621"
     CDS             complement(12311..14650)
                     /locus_tag="SB799_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867875.1"
                     /translation="MAELKFKTKAQNLKNLQTKLKKAKVLSLVLTSLEELISNEDKVL
                     QDIQTLKANRLIIRSSSLSEDSMKNSNAGAFLSLANIKADSKDELLKALYEVANSMPS
                     KSDEILVQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSKSAKTYYH
                     YRDYLEFKDIRLQKIIELIKELEVLYNCCFLDVEFAFAIQDDEEELFCLQVRPLVMHE
                     KNNLFHSLPKEALYRFYKRFESLKESRSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLVNFYLDKLNKNHELHDKIEFNIVYSCYDFNSSKKLEELLNHGFNENEIKRLEFSL
                     LELTNKIINPRSGLYLKDIQKAYKLKERYDGIINSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEIDFITKEEKDDFLNSLNTVSKNLSKQTNHLNFHNKDQFL
                     KDFGHLRAGTYNILSPRYDEDFELYFDVDQKDSKVYLQDKAFVFSEEKTKALNALLRE
                     HGLEINACEFFDFLKQAIEGRELVKFEFTRLLSKAIVYIEELGKYYGIEKEDLAHLDI
                     KSILNLYSSLYSINPKEQFVEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSITAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            complement(14665..15426)
                     /locus_tag="SB799_000622"
     CDS             complement(14665..15426)
                     /locus_tag="SB799_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEG0867876.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKGEKVDWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKSEGYFSCMWNHRDLNDPVQKIAEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLEAD
                     EGNELFNKISDKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(15479..16252)
                     /locus_tag="SB799_000623"
     CDS             complement(15479..16252)
                     /locus_tag="SB799_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0867877.1"
                     /translation="MKQGDFTEVAKHYHNRPAYSPFLLEKLVACINDKNKNLKDLNIV
                     EVGAGTGKLTKMLGEMFGCQISAVEPNDNMREEGQKFTQNLSNISWHKGSGEETCMSN
                     NQADWVIMASSFHWTDPKKSLPEFNRILTGGGYFTAIWNPRHIVEGSVFDEIEKEIKH
                     IVPELARVSSGTQNVKKWEEILVSTGDFTDCFFMECDYKEFWDKERYLGAWHSVNDIQ
                     AQAGEKRWKEILEMIEAKISHMQSIEIPYKIRAWTARKA"
     gene            complement(16536..16703)
                     /locus_tag="SB799_000624"
     CDS             complement(16536..16703)
                     /locus_tag="SB799_000624"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867878.1"
                     /translation="MKLYIILTFLKDDESIDIYYPPNFYEDTSIFNIVEHSFFNSREY
                     YKNYKLLIVLI"
     gene            complement(16937..17242)
                     /locus_tag="SB799_000625"
     CDS             complement(16937..17242)
                     /locus_tag="SB799_000625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867879.1"
                     /translation="MQKIDENFKKEKEQNKDLELNKFQITSREIFTIKTPENKDVEVE
                     LTCTAGLIQTSQINYEEIVRKEFLYKCFPVTWNDFLKLNKYEKNWHIQLKIVMILDC"
     gene            complement(17416..17859)
                     /locus_tag="SB799_000626"
     CDS             complement(17416..17859)
                     /locus_tag="SB799_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002934531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEG0867880.1"
                     /translation="MIFFNNLQRDANFYSIPKLNVSASTSGDNELIGLEGYETGEMLE
                     LSKAFFKTTPKNMKAIKVDGYSMVPMLLPDSWVVFEETHKYQGDGLYILNFDNQLMVK
                     LLQLDPISKVLDIISVNKDYKSYSLDLKDSQVELIIQGKVLRFII"
     gene            17843..18010
                     /locus_tag="SB799_000627"
                     /pseudo
     CDS             17843..18010
                     /locus_tag="SB799_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004297138.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
BASE COUNT         6158 a         2716 c         2787 g         6610 t
ORIGIN      
        1 ttctttgcat ttaattgctt ttaatgcctt agtggctatt ttttctttcg tgatttttta
       61 tttgcaagat aaactttttt taaatcccaa tttgataaat tctatgaaag gggatttgaa
      121 tttaaatact gtaattagtt ttattacaaa tacaaacctt cagcattata gtggagagag
      181 tgctttaagt ttgctttccc aaaatacagg cattttactt gctatgtttg tttcaagtgc
      241 aagtggatat tctgcttgta tggctttttg tcgtgcttta tgtggtatgc aaatgggaaa
      301 tttttatgaa gattttacgc gtattattac gcgtttgatg ttgcctttaa gttttatttt
      361 ggctgtaatt tttatctctg aaggcgtggt gcaaaactat cacgcaaatt ttagcgtgct
      421 tactttagaa aataaatttc aaagcattgc cacaggtcct gttgcagctc ttgagtctat
      481 aaaacattta gggacaaatg ggggtggttt ttttggtgct aattcaagca tgccttttga
      541 aaatcctact tcacttacaa attttttaca aattttatcc atgatgctta ttcctagtgc
      601 ctgtgttgta gcttttggat tgatggttta tcatagaaaa gaaagacaag gttttgctct
      661 tatgggaaaa gaagggggag ttatttttgg tgcaatgggg attattttta tcatttcttt
      721 gcttttaatt tattttagcg aaaaaatgtc aaatccaaat ttggattctt tgggtttaaa
      781 tgcaaatttg ggaaatttag aaggtaaaga aataagattt ggcacagatg gttcgagttt
      841 atttagtgct gtaactactg cttttactac aggaagcgtc aataatatgc acgatagttt
      901 aaatccttta agcatcagtg ctactttgct aaatatgatg ttaaatgtgg cttttggtgg
      961 cgaaggagta gggcttatga atatgattat ttatgtgctt ttaaccgtgt ttatttgtgc
     1021 attaatgata ggcagaactc cagaattctt gggtaaaaaa atagaaagcg cacaaatgaa
     1081 gcttatagct ttggtaattc ttatccatcc tttattaatc cttgttttaa gtgcattagc
     1141 tgttgttttt gcaaaagata gtataagcaa tcctagcttt catggcttgg ctcaaatttt
     1201 atatgaattt agttcttcgg cagcaaataa tggttcagga cttgaaggtt taaaagatga
     1261 taatttattt tggaatttaa gtacagcttt tgctatgttt tgtgggcgtt atttggtttt
     1321 aatagctcag cttgctatag ctggatcgct tttggctaaa aatacacaag aaaatactgc
     1381 aaattcttta aaaacggata atttaacttt tatgtttgtg cttgtttgta ttatatatat
     1441 ttttactgca cttacttttt ttccagtgct tactttatca agcgttgcag aatatttatc
     1501 tttatggcat taaggagagt caatgtctaa aaaacaaaat aaactcatta caaaagaaat
     1561 tttaaataat gccataaaag gagcattttt aaaatttgat ccacgcttta tggtaaaaaa
     1621 tcctgttatg tttatggtgg aagttggatt gattcttact ttgattttaa gtatttttcc
     1681 tactttgttt aatggaaatt ctgatgaaag aatttataac atcttaatca cttttatttt
     1741 atttataacc ttgctttttg caaattttgc agaaagtatt gcagaaggaa ggggtaaagc
     1801 ccaagcagct accttaagac aaagcaaaaa ggattctaaa gctagacgca taaaaagtga
     1861 tggcagtgaa gaaatgctta attctagcga gttaaaaata ggtgatatag ttttagttaa
     1921 agcaggtgaa cttataccta atgatggaga aattatagaa ggtgctgcaa gtgttgatga
     1981 atcagctatt acaggtgaaa gtgctcctgt tatgcgtgaa gcgggcggtg atttttcttc
     2041 tgttacaggt gggactacgg ttttaactga ttttttaaag attaaaattt tagttggagc
     2101 tggggaaagt tttttagata aaatgatcaa tcttgtagaa ggtgctgcgc gtcaaaaaac
     2161 tccaaatgaa attgctctta atactctttt aattgttctt agtttgagtt ttttggtggt
     2221 ggttgtaagt ttatatcttt ttatgcaatt tttaggcgtg agtttgccta tttcgtggtt
     2281 agtagcattg cttgtatgtc ttattcctac aactataggg gggcttttat cagctatagg
     2341 aatagcaggt atggataggg taacgcgttt taatgtgatc gcactttcag gcaaggctgt
     2401 tgaaagttgt ggtgatgttg atactatgat tttggataaa acaggaacga ttacttttgg
     2461 aaaccgtttg gcaaatgaat tttatgaagt ccaaggtata agtaaagaag aaatgattaa
     2521 agcttgtgtt ttatcctctt taaaagatga aactccagaa ggtaaaagca tagttgcatt
     2581 ggctcaaaaa atgggttatg aattagaagg taatgatatt aaagaattta tcgaatttag
     2641 cgctcaaaat agaatgagtg gtgtggattt acaagataat acaaaaattc gcaaaggtgc
     2701 ttttgatgct ataagagctt atataagcga aatgaatgga aaaattccta gcgatttaga
     2761 aactaaggta atggaaattt caaatcttgg tggcactcct ttggtagtgt gtaaaaatga
     2821 aaaaatttta ggagtgattt atctaaagga tacagtaaaa ccaggactta aagagcgctt
     2881 tgatgagctt agaaaaatgg gcataaaaac tttaatgtgt actggagaca atcctttaac
     2941 agcagctact atagctaaag aagcagggct tgatggattt atagcagaat gcaagcctga
     3001 agataaaata gaagccatta aaaaagaaca agctcaaggt aagatagtag ccatgacagg
     3061 agatggaacc aatgatgctc cggctcttgc acaagctgat gtaggtatag ctatgaactc
     3121 aggaactcag gcggccaaag aagcagccaa tatgatagat cttgattcta atcctactaa
     3181 aattttagaa gtggttgaaa taggaaaagg tttgcttatt actagaggca gtcttacaac
     3241 ttttagtatg gcaaatgata ttgctaagta ttttactatt ttacctgcta tgtttagtgt
     3301 ggttttacct caaatgcaaa ttttaaatat tatgcatttg gctaccccgc aaagcgctat
     3361 tttatcagca cttattttta atgctattat tatacctttg ctcataccta ttgctatgcg
     3421 tggagttaaa tttaagccta tgaaaagtga gcatttgctt ttaagaaatt tgagtattta
     3481 tggtttaggt ggtatgatag caccttttat agggataaaa ataattgata ttcctacagc
     3541 ttggatactt agaattttag gagtgtgata tgcttagaac tttgcttagt ttttttgtgg
     3601 taatgctaat attgtgtact cttatttatc cttttgcttt aaatacggtt gcaaaattta
     3661 tttttcctta tcaatcaagt ggaagtttag tggataaaga aggtcgtccg actttggata
     3721 taagcaaagc ggtaggttca aagcttttgg gtcaagattt taataagcct tattttctac
     3781 attcaagagc atctgtatca aattacaata caagtgatac aaatgaaagc agtgtaagtt
     3841 caggtggatt taattatgct atgtcaaatc ctgctttaaa agagcgtgtg caaaaagatt
     3901 tgcaaaaatt tttagatgag aatccgcaaa ttacaaaaga acaaattcct ttggatttgt
     3961 taagtgcttc gggatcagga cttgatcctc atatcagtct tcaagcagcc ctagtgcaaa
     4021 ttcctaggat aagtcaatct tcaaaaatta ccaaagaaga actagaaaaa atcattcaag
     4081 aaaataccga gtctaaattt ttagggattt ttggggaaga aaaggttaat gttttagctg
     4141 ttaatatagc tattgctaaa gccatgaaaa aagaataaac atgcaaagac aaagtcctga
     4201 acaaattctt aaaaaacttg aggttaaagc caaggaagaa gaaaaaaaca aacttgcaaa
     4261 attaaaaatc ttcttaggtt atgctgcagg ttctggaaaa acttatgcta tgttaagtga
     4321 agctagaact ttaagggata atggagttga tgttgtttta ggctatatag agcctcacga
     4381 tagacctgaa acaatggctt taacacaagg ttttgaaagt atagctaatc ttgaaattcc
     4441 ttataaaaat atagtattaa aagaatttga tttagacgct acccttaaga gaaaacctgc
     4501 tttggtttta gtagatgagc ttgcacacac taatgctaaa gggttgcgta atgaaaagcg
     4561 ttttcaagat atagaagaac ttctaaaagc agggattgat gtttatacta ctttaaatat
     4621 acaacattta gaaagtttaa atgatttagt cgctaatatc agtaagatag aagttaaaga
     4681 gcgtattcct gatcgtattt ttgatgaggc tgatcaggtt gaacttgttg atattgaacc
     4741 taataagctt ttaaaaagaa tgcaagatgg taaaatttat aaggaaaaac aagctaaact
     4801 agcacttgaa aatttctttc gtcaagaaag acttatagct ttgcgtgaga ttgccttaag
     4861 aagacttgct tcaagagtga atttaagagc aagtgaacaa aggcttatta atgatgattt
     4921 agcttatcat actggagagc atattttagt ttgtattaat gcttcaaatg caaaggttat
     4981 tcgtgcagct gcaagacttg ctttagcttt tcatgctaaa ttgagtgcgc tttatataaa
     5041 aaatcccaat attaaagaag aaaaagcctt agaagaaaat atagaactag ctaaaagttt
     5101 tgatgctgaa atcattagcg tatatgatga tgatatagca agacaaattg cagagtattc
     5161 aagccttagc aatgtttcta aaattgtttt aggtaaaaat aaagataaaa aaaagtttaa
     5221 agaagagatt tttgaagctg ttgctaaaaa agcacctaat attgatttat atcttgttaa
     5281 tgaaaatcaa atttctactc ctaaaatacg aagtaaaaaa ggttttgatt ttttaggttt
     5341 tttaaaaatc acaggagttt tgcttttagc aacttttata gcttttgtat ttcataaatt
     5401 taatactcag ccaagtaata tagttatgat ttttatttta gcagtttttg cttcttcttt
     5461 tatttctgat aataaaattt tcgcctttta ttcttctttg gtaagtgttt tgatttataa
     5521 ttttttcttt ttagaaccta tttttagtct taaagttcat gatagtggaa atattattac
     5581 ttttacaact atgtttatag ttggattttt aacagctgtt tttactagaa gattaaaatt
     5641 gcaatctaaa gaactcacta aaagagctta tagaacggct attttgcttg aaaatagtga
     5701 aaagttagca agagtgaaaa gcaaacaaga gctttgggaa caacttggaa atcaagcttt
     5761 aaaattatta aatttaccta ttattattta tcctataaat aaaaacaata ttttatcgaa
     5821 acctttgttg ttttttaacg atgataagca aatgttaaaa aattgtttta gtgctgatga
     5881 gattgctatt gctcaatggg ttgcaacaaa taaagaaaga gcaggtgttt gtacaaatac
     5941 cctgcctaat gctaatgcta tgtatttacc tatagaagat ggggaaaaaa ctaaaggggt
     6001 cataggtata gttttaaaag aaaaacgtcc cttgcaagac tttcagtatg aaattttaag
     6061 tgctttactt aatgaggcag gagttagaac aagggatata tttttattat aaatccctta
     6121 atttattaat ctcatctcta attgcggcag ctttttcaaa ctcaagtgct tttgctgctt
     6181 caagcatttg ctttcttaat tctttgacaa gttttgctct ttcgctagca ggcatttttt
     6241 ctagtttttt acctttgcga taaatttcgc ctaaatcctc ttcatttttc aaactctctt
     6301 caatatggcg tttgactgaa gttggggtaa tattgtattt tttattataa gccatttgaa
     6361 gtttgcggcg ttcattggtg gtatccatag cttcttgcat ggattttgtg atttttttgc
     6421 aaaaaagcaa aaccttgcca ttgacatttc tagctgctct tcccatggtt tggattaaac
     6481 ttgtagtgct tcttaaaaag ccttccttat ctgcatccat aatggcaatg agtgaaactt
     6541 caggcaaatc aagtccttct ctaagtaagt taatgccaat tagcatatca aaagcaccgc
     6601 ttcttaaacc tcttatgatt tcattgcgtt ctatagcatc gatgtctgag tgcatgtatt
     6661 tgacttttat accaagctct aaataatacc ttgtaagttc ttcagcgagt tttttagtta
     6721 gcacggttac taaaacccgt tcgtttcttt gtatgacttt tttagcctca tcaaataaaa
     6781 tttcaacctg attatcacta tcttttaatt ctattaaagg atcaagcagt cctgtaggac
     6841 gcatgatttg atgaaagatg ttttctttgc taagttcaag ttctaaaggt gcaggtgtag
     6901 ctgaaacaaa aagaaattga caatttttat ggataaattc atcaaacatt aaaggacgat
     6961 tatccaaggc tgaaggcaaa cgaaaaccat aatccactaa ggtttgcttt ctgcttctat
     7021 ctcctgcaaa catacctcta aattgcggta aagatacatg gctttcatcg actataacaa
     7081 gaaattttct atctttaatc gcaaaataat caaaaagcgt ataaggagta tcaccttctt
     7141 taagccctgt taaatgcctt gcataatttt caacgccttt acacattcct gtgcttgtaa
     7201 gcatctcaag atcaaattca accctttgtt taaggcgttg atattctacg agtttatttt
     7261 catgctcaaa ataagcaagg cgttcgttaa gttctgcttt tatgtctttt atcgcttgtt
     7321 ttaatcttgt ttcgcccacg ctaaactggc ttgtaggata gagtatgaag cgttttaaat
     7381 ctttaccttt tttattttct aaaacattgt aatgatacat agcatcaagc tcatcgccaa
     7441 aaaattcaag tcttactact tcatcttcat aataagctgg ataaatgtct ataatatctc
     7501 cttgaactct aaaatctgca cgatcaaaaa aattatcatt tcttttataa cccatatcta
     7561 caagtttttt taaaagttct ttttgtgaaa tttgcatacc tagttcaaag attaaaacca
     7621 tgcctatgta ttcatttgga ttaccaagtc cataatttgc tgaaacacta gctatgcaaa
     7681 ctacatcttc ataacttaaa agagaagcag tagtactcag tcttaaacgc tctaagtctt
     7741 cattggtcga gctgtctttt tctatgaaaa catcagtgcg tgggatatag gcttcaggtt
     7801 gataataatc ataataagat ataaaatatt ctacatgatt tttagaaaaa aagcctttaa
     7861 attcactata aagttgtgca caaaggcttt tgttgtgact catgataaga gtgggtatat
     7921 taagttcttt aatgacattt gccatggtaa aggtttttcc acttcctgta acgcctagta
     7981 aggtttgata tttgttgcct ttttttatac tttttactat gccttttatg gcttcttgtt
     8041 gatcgggact gggtttaaat tcgctggtaa gttctaacat ttttctactt tatttttatt
     8101 tttgaaaaaa ttttaaaaga aaatgcttta attaaaaatt aattgacaat aaaaacctaa
     8161 atttaaattt ttttctgcta caatatcaaa taatattttc cataaattac aaatttctta
     8221 agaaggcaaa aatatgtttg atgaaaaaat aatcaatact atgacagata aagtaaatga
     8281 attaattgaa aagtataacg aagtttgcga agccaatgag gctttaagaa atgagcttgt
     8341 aagcgttaaa gcacaaaatg aagcgaaaag taatcaaatc atgcgtttag aagaagaact
     8401 taaatctcgc aatatagaaa gcgaagatat ttacaagaaa atagaggctg ttcttggcag
     8461 ataatctaaa acaagtcatt gttaatgtca atgcaaaaga tttcattgtt aagtgcagtg
     8521 aagaatttgc aaatttttta gaagatgata tcgctttgat ttctggcggt actaaaaaaa
     8581 tagaacttaa acgctttgta gatgcgtttg ttaaaaaaag ttatgaaaat tatattttag
     8641 aaagagaact taagaaacta ataaaagcaa tcaatgaaga actcccgaca aaatgaataa
     8701 agcttttact ctgcttgagc ttgtttttgt gattttgatt ttgggaattt tatcaagctt
     8761 atctttatct tttatcaata ctacaaaaga tgaggttaaa attttaaaat taaaaatgga
     8821 ctatgaaatg ctaagctcag ctcttgcttt aatgcgtagt caaatgagac ttaaaaattt
     8881 aaattttcca gaaattttag ataatgcgca aaacaatcaa gccaaagaaa aactctttta
     8941 ttgtttaaat gattgtgatt attctttgct tgatacacct atttattctg attttaaatc
     9001 ttggataaaa ataggtaaaa atcactatag atttgcatta aacgccaaag agatggttga
     9061 atttatttat gattctaaag aaggcttgtt aaagtgtata ggaagttcta gatgcaaaga
     9121 tctgatataa gatattatga acttgcaatt tgtggtttgt atttggataa tttaactttt
     9181 catagttttg atgaaatcaa acctttaaca caagtattag tggatttaaa aactaaaaaa
     9241 aaccttaaag ctatcgtgct taaagaatgt caaaaacctg attttaaaac cgtagaaatt
     9301 aaagaaatta caaagtattt tttaactcct ttgcaatttg aattggcaaa ttttattgtt
     9361 tattattatg cttcaaaact tggttttgtt ttgggctttt ttgaaaccag tcctaaatat
     9421 gaatgtcaaa aaatgttttt taaagatacc cctaagctaa gcaatcaaca acaaaatgcc
     9481 ttaagttttc ttcaaaaaga aaataattcc ttactttttg ctgatacagg tagtggcaag
     9541 actgaaattt atatttcttt gataaaagag tgtttagaac agggtaagca agctttactt
     9601 ttaatgccag aaatcgcact tactccacaa atgaaaaagc gtttagaagt gtattttaag
     9661 gataattttt tcctgtggca ttctaaaatt tcaaagaaaa aaaagcaaga atatttagag
     9721 cgtttttgca agggagaagt acttttagta gcgggtgcaa gatcggcttt gtttttgcct
     9781 tttagaaatt taggacttat tgtagtagat gaagaacatg ataattctta taaggcttct
     9841 aatcagcctt ttatcaatgc aagagattta gcgctttttt tgggtcaaaa aaataatatt
     9901 aaagtggttt taggttctgc aaccccatct ttgacgagtt tttacaaaca aaaaagtttt
     9961 agactaaaag gaactttttt tgagagcaaa aaacattttt tatatgatga aaatgagctt
    10021 ggtataacgc ctatgctttt aagcgaatta gaaaaaagtt taaaacatca aaaacaagct
    10081 atagtgtttt tacctacaag ggctaatttt aggcaaatca tttgcaagga ttgcggagaa
    10141 acgataaaat gtcctttttg ttctatcgcc atgagtatgc ataaaaagaa aaatgtttta
    10201 aaatgtcatt attgtaatta tacttcttta atagagcaaa attgtccaag ttgcaaagga
    10261 gaaatgttag aagctagaaa aatggggact gctgaacttt tagagctttt gcaaaatgct
    10321 ttgcctttag caaaaatagc aaaatttgat agcgatgaaa tcacaagcgt taaaaagctt
    10381 aatactattt taaaagactt taatgaaaat aagatcgata tacttattgg cacctctatg
    10441 cttgctaaag ggcatgatta tcatagcgtg gatttgagtg tgattttagg gcttgatgag
    10501 tatttgttgc gtcctagttt tagagcgagt gaagaaactt tagctttagc tatgcaagtt
    10561 gctggtaggg cagggcgtaa aggcgaagca agagtgcttt tacaaacaaa aaatagagct
    10621 ttttttgaaa ggtatataga ggattatgat gcttttttaa aagatgagtt agaaaataga
    10681 aaagatcttt atcctccatt taaacgcctt ttaagagttc ttatagaaga taaagatcaa
    10741 aaaaatgcac aaaaactttg tgaaaaactt gcctatcaat ttaaaaatat caaacaagta
    10801 gaattagtag gctatggaat ttgtggagtt gaaatgctgc atggaaaata tcgtttttat
    10861 ttattactta gaagtgaaaa ttataaagct ttagtggcaa ttgaaaatta tattttgcaa
    10921 tttaaaaatg taagtgcgga tattgatcct attgatttta tatgaaatta atttttaaat
    10981 cactcataaa atcaatttca caccaattgc catcaatttc cactgctttt gcgttgttgt
    11041 atttttcaat caaagcctgc aaaaaacttg tcatatacat attttcaaaa tttttattat
    11101 catataaaat atctcggtca agcatttcat aaaaagcaat aacttcagaa agaaattgat
    11161 aagaaaattt aaaaagtcct atatattgag cttctatctc atcataggca ttagcttttt
    11221 ttccaagttc tataatataa ccatttgtca tctttaatgt ttcagcatct tctaaaggat
    11281 ttgcaaagcg tttgttccaa agcttacgcc aagacttatc aactactata gcaagttctt
    11341 ctttggcatt tataagcttt tgcacgcaat cttgaaaata aacaatatcc gcataagaaa
    11401 taatcaaatc ttgtttttct tcgatgcatt ttaatataaa atctttagcg caaaaaaaag
    11461 tatgaaccat attggtttta tcatattttg aattaataaa aaaatgctca atatcatatt
    11521 tattaagata attttttagc acatcgttta aatatccacc cacaacagct atttcattta
    11581 tacctgctga ttttaaagct tcgatttcat aatctattat ttttttattc ttatactcaa
    11641 ccatacactt tggttgatct tttgttaaag gcatcagcct tgatccaaaa cctgctgcta
    11701 agataattgc attcatatta ttccttgatt aaactaaacc actcttttaa aatttgaata
    11761 ttattaagcc cattttctct ttcaatatgc cacattatac caaaaatatt ttcatactta
    11821 tgtttaaaag cttctatggt attatctttt gctaagcaaa gttctacaag atcttcgcct
    11881 aatttttcaa tagcaaaatt atgaaaagaa ttacttataa atttttcttt tgagaaaaat
    11941 acttcatgtt tgcctatatg attttcacaa ggacttatat ggctgttaaa ataatgagct
    12001 atcatctgag ctcctctgca aattcctaaa agtggtattt tttcttttaa acaaatttct
    12061 ataacttgct tttcatataa atctctcttt ttagataaga cattaggact ataaaaactt
    12121 aaatcattac caccgcttaa tatcacagct tttattagat gtttataatg agaaaaatct
    12181 atttcatagc taagaggaag aggagtaaaa tttttaaata aatctttatt aaataatttt
    12241 ccccaatcca aagccaaaca ttctctttct tcatgataac tttcgttgta aataagcctt
    12301 tgagtaatac ctataaacaa aatatttgct cactttcaca ttctatattt atttttttag
    12361 cttttaaata tttttcaaaa ttttcttctc caactcctat aacagcaggc attccaagtt
    12421 ctgaggcacg aatggccata tgtgaattag cacccccata acatgtaata agtcctgcta
    12481 tattttttgt aaataaataa tcatatccag gatctgctgc ataaattaaa acaatctttc
    12541 cttctaaatc tttatcattt tccttcgccg taaatgcagt aatgctcttt tgtgtaataa
    12601 aatttggaat aatactatga ttataaaaag aaaaaatttc atcggcattg caaagcaaag
    12661 aaggaagttt tatagcttgt gtaagttcat attctttttt attgcgatta atttcttcta
    12721 caaactgctc ttttggattt atagaataaa gactagaata aagatttaaa atgcttttta
    12781 tatcaagatg agccaaatct tctttttcaa taccataata tttgcctaat tcttctatat
    12841 aaactatagc cttagaaagc aatctagtga attcaaattt aacgagctct ctaccctcga
    12901 tagcctgctt taaaaaatca aaaaattcac aagcattaat ctctagtcca tgttctctaa
    12961 gtaaagcatt taaagctttt gtcttttctt ctgaaaaaac aaaagcttta tcttgcaaat
    13021 aaactttact atctttttga tccacatcaa aataaagttc aaaatcttca tcatatcttg
    13081 gagataaaat attataagtt cctgctctta agtgtccaaa atctttcaaa aattgatctt
    13141 tgttgtgaaa attaagatgg tttgtttgtt tacttaaatt tttactcact gtattgagtg
    13201 aatttaaaaa atcatctttt tcctctttgg ttataaaatc aatctcaact aaagaattta
    13261 aaagttgcat tgctacaaat gcagccctag ccacccccgc aaaaggcaga gttccataac
    13321 gtttacattc ttcaataagc caataaattt tatcaattaa agaaaaatta gaattaataa
    13381 tgccatcata tctttctttt agcttataag ctttttgtat gtcttttaaa taaagccctg
    13441 atctaggatt aataatcttg tttgtaagtt ctaataatga aaattctaat cttttgattt
    13501 cattttcatt aaaaccatga tttaaaagtt cttctaattt tttagaacta ttaaagtcat
    13561 aacaagaata aacaatatta aattcaatct tatcgtgcaa ttcatgattt ttattaagct
    13621 tatctaagta aaaattgaca agtttttgcg cgatattttc atctaatttt tttggtataa
    13681 aagaattaaa agataatctt acatccacat aaggaatgcc taaaaaagaa tggattaaag
    13741 gatgggatct taaatctcta taaccataat tatctctttg atacgcccag atattatccg
    13801 taatgatttc tttatataaa ctaaaagcta aacgcttagg tcttaaccct atgatttcag
    13861 ctggattcca atcaggcatt accccaaaaa tggctttatc tcccaaaact ctagatcttg
    13921 attcttttaa agactcaaaa cgtttataaa atctatataa agcttctttt ggtaaagagt
    13981 gaaataaatt atttttttca tgcataacca aaggacgcac ttgcaagcaa aaaagttctt
    14041 cctcatcatc ttgaatagca aatgcaaatt caacatctaa aaaacaacag ttatataaaa
    14101 cttctaattc ttttataagt tctataattt tttgaagtct aatatcttta aattctaaat
    14161 aatctctgta atgatagtaa gtttttgcac tcttactact tccatctgta atagagctat
    14221 ttgaaccatt ttcatcatat tgaagacaaa aataagggga aaaattatcc ttatcaacac
    14281 taaaaccaac gccacaaaga gtaatatttt caagcatagg ttgaactaaa atttcatcgc
    14341 tttttgatgg catagaattg gcaacttcat ataaagcttt taataattca tctttagaat
    14401 cagctttaat atttgccaaa gaaagaaaag cacctgcatt ggagtttttc atactatctt
    14461 cacttaaaga agaacttctt ataatgagtc tattagcctt taaagtttga atgtcctgta
    14521 aaactttatc ttcatttgat attaattctt caagcgaagt taaaaccaaa gatagaactt
    14581 ttgctttttt taattttgtt tgtaaatttt ttaaattttg tgctttggtt ttaaatttta
    14641 actccgccat atttttcctt agttttatat ttttttagca ctccaacaac gagtggtata
    14701 ttttatgcta aattccttag gaagtctttg agaaatttta tcactaattt tattaaaaag
    14761 ttcatttcct tcatcagcct ccaaatccca gtaaggattt ttaacgcttt tccatgcatt
    14821 aatataattt tcaatgcttt gatgaaaata aaaatcctct tcaatataaa caatattatc
    14881 aaaaagatcc tttcgactct ctataattgg tctttgatct tctcttcttg ttccccttgt
    14941 ataatttggt acaaattcta caatagtatc ttcagctatt ttttgtacag gatcgtttaa
    15001 atccctgtga ttccacatac aagaaaaata tccctctgat tttaataagc gatgcgcttc
    15061 ctctaaggct tcatttctat ccattacatt aaaactacta ccaaaagtca cccaatcaaa
    15121 ttcactattt tgaagtgttg agtttaaacc tgttgcccta acccaatcaa ccttctcacc
    15181 tttagttctt tctatcccga tctcacgcat cgcatcattt ggttctacag atactacctt
    15241 acatcctctt tctaaaagca taatgcttaa atttccagtt cctgcaccga tatcagcgac
    15301 tttaatatct ttttttccaa ctaaactaat aagcatatct atagtttttg gagcataatt
    15361 tggtctatag ctataaaatt tagcatgctt ggtataatcc cacacttgtt ctactagttt
    15421 ttgcatttta tttccttttt ttcatctttg acaagcttga tgaaaaaaag gaggtatttt
    15481 atgcttttct agctgtccat gctcttattt tataaggaat ctctatactt tgcatatgag
    15541 aaattttagc ttctatcatc tctaaaattt ccttccacct tttttcacct gcttgtgctt
    15601 gtatatcatt tacagaatgc caagctccaa gataacgttc tttatcccaa aactctttat
    15661 agtcacactc cataaaaaag cagtctgtga aatctcctgt tgaaacaaga atttcttccc
    15721 attttttaac attttgagtg ccactgctta cacgagcaag ctctggaaca atatgtttaa
    15781 tctccttttc gatttcatca aaaaccgaac cctctacaat gtggcgagga ttccaaatcg
    15841 cagtgaaata ccccccccct gtcaatatac gattaaattc tgggagagat tttttaggat
    15901 ctgtccaatg aaaagaacta gccatgatga cccaatcagc ttgattattg ctcatgcagg
    15961 tttcttcacc acttcctttg tgccaagaaa tatttgataa attttgtgta aatttttgcc
    16021 cttcttcacg catattatcg tttggttcca cagcgctaat ttggcatcca aacatttctc
    16081 ccaacatctt agtaagtttt ccagtgccag ctcctacttc aacaatattt aaatctttta
    16141 aatttttatt tttatcattg atacaagcta caagtttttc aagtaaaaac ggactataag
    16201 caggtctatt atgataatgc tttgcaacct ctgtaaaatc tccttgtttc atattgattc
    16261 ctttctctaa attaaaatgc aattatatct tttttttatt aatttacaaa tcttttgtcg
    16321 gcggaaaaat aaaatttcca tttggaaaaa taaaacttcc ataaaagtgg aaattttatt
    16381 tttctacaaa ccttaaactt aaaatataac tttattaaaa taaaactaac aaaaaattcg
    16441 tttatgatgt tcattttctt taacaatagt tttcatatcc aaataatgct ttactatata
    16501 ttttggaatg ttaaagtcgc aatcagagtg tggctttaaa tcaaaacgat taaaagtttg
    16561 taatttttat aatattccct actgttaaaa aaactatgtt ctactatatt aaaaattgat
    16621 gtatcttcat aaaaatttgg cggataatat atatctatac tttcatcatc ttttaaaaaa
    16681 gtaagtatta tataaagctt cattcaactc atcaccccta tgcattgttt gcataggaaa
    16741 atagcttcct tctggtattt cattaaaaag aagtcgatat agtagcgata agcttttaaa
    16801 cttaatttgc tttttatttg aacggggtcc gaaaattcgt gcaaatatct cttcctagat
    16861 cgtatatctt ttttaaaata ttcaggaagt tcactttgtc attttaaata tttgaatatt
    16921 tgctcataaa cctcttttaa caatccaata tcatcacaat ctttaactgt atatgccaat
    16981 ttttttcata cttgttaagc tttaaaaaat cattccaagt tactggaaaa catttgtata
    17041 aaaattcttt tctaacaatc tcttcataat taatttggct agtttgaatt aatccagctg
    17101 tacaagttaa ttcaacctca acatctttat tctctggagt ttttatggta aaaatttcgc
    17161 gtgaggttat ttgaaattta ttaagttcca agtccttatt ttgctctttt tcttttttaa
    17221 aattttcatc aattttctgc attttttacc tatgctcttc gttgattttt tgcatttcct
    17281 gcttatattc attccaaatt tcttttagcg gcttatttgg tgttcctttt atttttctat
    17341 ataaataatt acataaaaga aaataaagat acttattaat attagcaaca caatattcac
    17401 tttaattcct ttaaattata taataaaacg caaaactttg ccttgtataa tcagctcaac
    17461 ttgcgagtct tttaagtcca aactatagct tttataatcc ttatttacac taataatatc
    17521 taaaacttta cttattggat ctaattgcaa aagtttaacc attaattggt tatcaaaatt
    17581 taaaatatac aatccatctc cttgatactt atgcgtttct tcaaaaacaa cccagctatc
    17641 aggtaaaagc attggaacca tagaataacc atcaacttta atagctttca tatttttagg
    17701 cgttgtttta aaaaaggctt tactaagctc aagcatttca cctgtttcat atccttcgag
    17761 cccaattaac tcattgtcac cactggtaga agccgaaaca ttaagttttg gtattgaata
    17821 aaaattagca tctcgctgca agttgttaaa aaatatcaag ggtaaattta tgctttctta
    17881 taatgattgt gagcttataa gagagcttta taaagatttt aatattaagg aattaaaagt
    17941 aaggtattct ttaaataata atgttttaaa aagaaaagaa agtaaagagc ttttgattat
    18001 gaatttttag caagctaaga gagtaaaaat actctcttta atatttaatt ttgtaaaaat
    18061 atggtaaagt acctttaaaa ttaaaaataa tttaaggatt tattatagaa aacaattaca
    18121 ccaattctga tattattact attgcaagtt cttatctaac ttatggaagt ttaattgttg
    18181 ctattgctac tttcttaaca gctgttattg ccatagggct tactatatat tataaccgtg
    18241 ataaacaaag attaataaaa gaaacaactg a
//
LOCUS       DARBAC010000025        18242 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.025, whole genome shotgun sequence.
ACCESSION   DARBAC010000025 DARBAC010000000
VERSION     DARBAC010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18242
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.025"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            176..550
                     /locus_tag="SB799_000628"
     CDS             176..550
                     /locus_tag="SB799_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEG0867881.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDAS
                     KGHFLLAKANCNFLKPAKLGDMIEIKTKILEVKNASVEILQEIYKDEILLFKMELTLA
                     FIKNEKPARMDMQLKKLFEELF"
     gene            complement(542..1732)
                     /locus_tag="SB799_000629"
     CDS             complement(542..1732)
                     /locus_tag="SB799_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867882.1"
                     /translation="MKKIFLIFFLSCFLLNAKEQKLVDVKPVENFYPKLSVQECNTNC
                     LFDLLESRLYLSFLSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEK
                     TIKSYSNTIINSSIAYLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGF
                     TLKGANELKNYSGNMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNANIAI
                     FSDGSALSSNLNSRILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKT
                     ALASSQLRIYNIHPYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNE
                     IFNQSIDYNWIAYATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASF
                     EELK"
     gene            complement(1729..2337)
                     /locus_tag="SB799_000630"
     CDS             complement(1729..2337)
                     /locus_tag="SB799_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEG0867883.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNVKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEIFAYKNFFIMPSYDLDFIEKNPSYEKNFIQDLKKIKGFL"
     gene            complement(2334..2813)
                     /locus_tag="SB799_000631"
     CDS             complement(2334..2813)
                     /locus_tag="SB799_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0867884.1"
                     /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHS
                     LLKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKAVF
                     KFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            2944..3078
                     /gene="rpmH"
                     /locus_tag="SB799_000632"
     CDS             2944..3078
                     /gene="rpmH"
                     /locus_tag="SB799_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEG0867885.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            3075..3401
                     /gene="rnpA"
                     /locus_tag="SB799_000633"
     CDS             3075..3401
                     /gene="rnpA"
                     /locus_tag="SB799_000633"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEG0867886.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            3398..3739
                     /gene="yidD"
                     /locus_tag="SB799_000634"
     CDS             3398..3739
                     /gene="yidD"
                     /locus_tag="SB799_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEG0867887.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKGGFDYPRVSKNFYPMNLCFKPIFLAKKQLCFLYIPYKNKSFY
                     LIKIIFKRTNQ"
     gene            3736..5328
                     /gene="yidC"
                     /locus_tag="SB799_000635"
     CDS             3736..5328
                     /gene="yidC"
                     /locus_tag="SB799_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEG0867888.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNIT
                     QQNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DKKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLGKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANKNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGVTMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFAKEHHKKQAEHEK"
     gene            5325..6143
                     /locus_tag="SB799_000636"
     CDS             5325..6143
                     /locus_tag="SB799_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HEG0867889.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFASSKNHKPETHEPKQENKIEIKNEKNKIQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYNEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            6136..7464
                     /gene="mnmE"
                     /locus_tag="SB799_000637"
     CDS             6136..7464
                     /gene="mnmE"
                     /locus_tag="SB799_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEG0867890.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESK
                     DAIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            7475..9661
                     /gene="purL"
                     /locus_tag="SB799_000638"
     CDS             7475..9661
                     /gene="purL"
                     /locus_tag="SB799_000638"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEG0867891.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVMGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPTSEPKYLSEIKNYKFE
                     LKSSIQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGKLGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLTSDFDDEKMIFDESASRAIIGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYFESFKEQIQ"
     gene            9658..10428
                     /locus_tag="SB799_000639"
     CDS             9658..10428
                     /locus_tag="SB799_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HEG0867892.1"
                     /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSTKKELSLDEAFAILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEEELKIGVEKFQKINEAYEKVKKHLER"
     gene            10431..11963
                     /gene="purH"
                     /locus_tag="SB799_000640"
     CDS             10431..11963
                     /gene="purH"
                     /locus_tag="SB799_000640"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEG0867893.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFRANFKALKSEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            12062..13654
                     /locus_tag="SB799_000641"
     CDS             12062..13654
                     /locus_tag="SB799_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEG0867894.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDI
                     SHSLEGVQKDISKTSQSYIIIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACGYINQFIEKTHKAVSGASHNSKNVEKQSNLLNSNAISL
                     SDISSQSHKQIDQSFKLGANVGNELGELASLSNKANSANEKSFLLLEQMLKSLFNVAN
                     KVSTVSQNENELAKKVENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFG
                     RGFSVIAEDVRQLAQNSEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTAL
                     LVDDANEVKLCNEDARALVTQCTEKIKISQENIQNLLSRMQENVEVSEKNEEISKILL
                     QVADELKIVCHNLESELNQFQI"
     gene            13664..14098
                     /locus_tag="SB799_000642"
     CDS             13664..14098
                     /locus_tag="SB799_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEG0867895.1"
                     /translation="MKKTLQIALAAAFFAGCASTSVTSSTSKGNNELVQNQLFKIEKI
                     IVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
     gene            14197..15174
                     /locus_tag="SB799_000643"
     CDS             14197..15174
                     /locus_tag="SB799_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEG0867896.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWNPYLEEILQSYKEFVKAVS
                     EFQKVLLIAPKQSDFENFKDIKNVEYFKCDTNDTWIRDFGAIDIVENGRFKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDTKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLIELPIPKPLCYEGRRLGATYANFVFINNALIVPF
                     YKDKNDEIIAKRLSKALPNHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            15171..16058
                     /locus_tag="SB799_000644"
     CDS             15171..16058
                     /locus_tag="SB799_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEG0867897.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTEFSAFKIIKKALAFLMDEALPKKQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            16055..16927
                     /locus_tag="SB799_000645"
     CDS             16055..16927
                     /locus_tag="SB799_000645"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HEG0867898.1"
                     /translation="MKIALIQQKFHSNKEQTIKKTCEFIEEASKQGAELICLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLITSLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFADLTKRFID"
     gene            complement(16939..>18242)
                     /locus_tag="SB799_000646"
     CDS             complement(16939..>18242)
                     /locus_tag="SB799_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEG0867899.1"
                     /translation="ACSTKNLTSLHHENLEQKNENQHYAKLEYEQNVSILPQFAYDIN
                     FDAKRYKKYFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFFNKQIIPLSWFKNATN
                     NANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIPFDYASDGILNAGTPV
                     LISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLNFITPLKEKFPIYSED
                     GKFFFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFNDKNLKNQLSQV
                     LNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFNHFDISTLSNSQKKDF
                     LNRFGKAYLSLLYLPGHIMLYVGQIADNNIAIHNIWGLRKDTTQRLLISSSVITSLEI
                     GKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
BASE COUNT         6530 a         2275 c         3278 g         6159 t
ORIGIN      
        1 ataaaaaagt tattttttaa ttttattttt ataatatata tttaatatta ttaaaaagct
       61 ttattaaatt aagattggac ggaatttttt aatataaact aaaaagcgat atcaaagaat
      121 ttccgttgta taatccaatg ttttttaaat gtaaaatatt ttttaaggta aagcgatgaa
      181 aatgcgtgtg tattatgaag atactgatgc gggtggagtg gtgtatcata gtaattattt
      241 aaaattttgc gagagagcaa gaagtgaaat ttttttcaat aaaaaagtag atatttttga
      301 tgcgtctaag ggacattttt tgcttgcaaa agcaaattgt aatttcttaa aacctgcaaa
      361 acttggagat atgatagaga ttaaaacaaa aattttagaa gtcaaaaatg cttctgtgga
      421 aattttacaa gaaatttata aagatgaaat tttgcttttt aaaatggaat taactttagc
      481 ttttattaaa aacgaaaaac cagctagaat ggatatgcag ttaaaaaagc tctttgaaga
      541 attattttaa ttcttcaaag cttgcttgtt tgccttgcat aagacgcact ttgtaatcaa
      601 cttgagaatt tttgattttc tcatcaaata aactttcgct ttttttattt aagaattcgg
      661 tataaaagta atcaactcct atactagtag cataagcaat ccagttataa tctatacttt
      721 gattaaaaat ttcattaaga tagactaagt tatcatcgtg gttattgatg gaattagcaa
      781 tgatgaaatt ttctctatct ccttgttgtg ttaaacttaa aaatgttgga ttatagttga
      841 tttgagtgga taaaagcaca taaggatgaa tgttataaat tcttagttga gaacttgcta
      901 gagctgtttt gatcaatgga gtgttaaaaa atattgaggc attattaact ccaccttgtg
      961 atcttaaaag cctgctaaaa tcaagcttct cgccttctat ggtatatatt ctagcattat
     1021 tattttgagc aagaattctt gaatttagat tgcttgataa agcagagcca tcgctaaata
     1081 ttgcgatatt agcatttgat ttgcttaaaa gtgtggcaat ttgagcatca tagtcaatac
     1141 ttccaaaaat aatattttga tttgaaattt gtatgttgtt tttatggata gttggtatga
     1201 aaattttcat atttcctgag taatttttca actcgttagc accttttaga gtaaatccag
     1261 ctatggcata ctgatatcct tgagcttgtg ctgcatcaag tgcggctcgg attttatcac
     1321 tatcttctgt gccggttaaa aaaactttta ctttgatttc agctctttgt cttaaaagat
     1381 aagctatgct tgaatttatt atagtatttg agtaactttt tatagttttt tctgggataa
     1441 ttatcgcaag tttaacagaa gtaatttttt gaacattttt ttcaaaatca gtaatggaat
     1501 ttaataattt tgcataaaca ttagatagaa attgatcgtt ttgatctgca aattcactta
     1561 aaaaactgag atacaatctt gattctaaaa gatcaaaaag acagtttgtg ttgcattctt
     1621 gaacgcttaa tttaggataa aaattttcaa caggttttac atcgactaat ttttgctctt
     1681 ttgcattaag caaaaagcaa gataagaaaa atattagaaa tatttttttc ataaaaatcc
     1741 tttaattttt tttaaatctt gtatgaaatt tttttcataa cttggatttt tttctataaa
     1801 atctaaatca taacttggca ttatgaaaaa atttttataa gcaaaaattt caccttttaa
     1861 aatgtgataa tctttaaatc ccaagctttt aaatgtgtat tctcctagac aaagcaaaaa
     1921 agcaggttga atcagtttta gttcgttcca gaaaaatggt aagcaagatt gtagcgaaaa
     1981 atcatcaaat tttccattac aaaaacattt aaatagataa gaaaaataaa aatcttcatc
     2041 gcaaagccct aaaatttgat aaatatagtg ttttaatttt tcaccttttt ttgaattaag
     2101 taaaattcca ctttcatttt cactcttttg cccaaaaaca tcaagaatta gcaatttgac
     2161 attttttatc ttaggctcca taagactaaa ttttcttgtt ttggaaaatt ggcataaggt
     2221 gcaagatgaa acaagttgtt ttaattcttg aaaattttgt acttgttcaa aatggtttgt
     2281 atgtgtatca acaaagttaa accccatagc ttttaaataa taaagacttc ttatcataaa
     2341 tcacacaatt tttctaaatt ttctccactt agacgataat ttctccattg tttaagatgt
     2401 ttagcgttta aactttcata aaaattaata cctaaaatat tatcatttaa gcaaacccag
     2461 tcaagtcttt ttaaattttc ttttttgcaa atttctccta aaaatttaaa aacagctttt
     2521 ccataacctt ttttacgaaa atcttctcgt atataaatat cttcaaggta aattccaccg
     2581 ctgccccaaa aagacgaaaa agtataaaaa taaatcatat agcctatagt tttttcattt
     2641 tcttttaaca aaaaagcacg agcaaattta ttttttagta aagaatgttc cagtttttct
     2701 ttcgtgcatt gaagaaaatc taacatatct tcgtattttg caaattctat gatcatctct
     2761 tgtaaaatat ctaaatcttc ttgtcttaaa tcaataattt taaattctga catttttaac
     2821 cttttaaaaa taatttcaaa atttatcaaa agaatttaaa aattactctt aatcaaaagc
     2881 aatttataag taagattaag ataaaataca agtttatttt ataatttttt aaggaaaaat
     2941 caaatgaaaa gaacttatca gccacatggc actccaagaa aacgcactca tggtttccgt
     3001 gttcgtatga aaactaaaaa tggtcgcaag gtgatcaatg caagacgcgc taaaggtaga
     3061 aaaagacttg ctgtgtgaaa aattttgata aatttagcac aaacgaggaa ttttcatctg
     3121 tatataaagt aggtaaaaaa tggcattgcg aaggtgtgat cattttttat ctgaatagtt
     3181 atgaaaaaaa aatagcagtt gttgctagta aaaaagttgg aaaagcagtg gttagaaatc
     3241 gttcaaaacg aattttaagg gctttgtttg ctaagtttga aagatatctt caagatggca
     3301 aatatatttt tgtagctaaa aatgaaatca ctgaactttc tttttctagg ttagaaaaaa
     3361 atctaaaatg gggattgaaa aaactagaat gtttcaaatg atatgcctaa aaatactccg
     3421 tttttatcag aaattcttaa gccctttaaa acccgctgct tgtaggtatt atcctagttg
     3481 ttctgagtat gcgctttggc agtttcaaaa aaagaatttt tttctagctt ttttttctac
     3541 tttttttaga attttaagat gtaacccttt ttttaaaggg ggttttgatt atcctagagt
     3601 ttctaaaaat ttttatccta tgaatttatg ttttaagcct atatttttag caaaaaaaca
     3661 actttgtttt ttatatatac cttataaaaa taaaagtttt tatcttataa aaatcatctt
     3721 taaaaggaca aatcagtgaa taattcaaat aatatttttc agcaaaagcg tatacttttg
     3781 gctgttgtga tttctttttt attttttgtt gtttatgatt attttttcat tccaaagcaa
     3841 cctttaaaaa tagaacaaaa cattacacaa caaaatcaac aaaacacaag cataaataac
     3901 actcctaata tacaaaatac caccacaaat actccaagtg cagctttagt ttcgcaagat
     3961 agtgtgatat ctaaggttca aagcaagcat tttgaagcac aaattgactc ttttggtaga
     4021 atttctgctt tttatttaaa agataaaaaa taccaaaatg agaaaggaga atttataaat
     4081 cttgttagca aggaaaatag tccttatcct ttagaaatgc gttttagtga tccaagtatt
     4141 aactcagagg cttttaaaat tccttatgtt gctaacgcta gcaatctttt tgttgatgaa
     4201 aatggaagtc aagttttaaa actcactcaa aatctttctg gattgaaaat cgaaaaagat
     4261 attacttttt atccaaaagg aaattatgag atagaagtta aactcggcaa gaatgcaaat
     4321 tattttataa gtccaggata tcgtccaaat attgccgtag atagttatac agttcatggt
     4381 gctttggtaa tggataataa agaaaccatc gaaacttata aagatggaga tgtagaaaag
     4441 gatgaaagtg ctaataatgt cgtaatgact tcggcttttg atagatacta tgcaactttc
     4501 ttttataatt ttgataaacc tttaaatgtg gcaattagca aggatgctaa taaaaaccct
     4561 atagtttttg cttatagtga taatgaattt aaagcagggg gttatatagg ttctaaagaa
     4621 catgtgattt taagaagtat agatccacgc cttgaagcag ttgttgaata tggttggttt
     4681 acttttattg ctaagcctat gtttgagttt ttgaatttct tgcatcagta tataggaaat
     4741 tggggttggg ctatcgttgt gatgacttta attgtgcgta ttattttatt cccgctaact
     4801 tataagtcta tgatttctat gaataaactt aaagatcttg ctcctaaaat gaaagatatt
     4861 agagagcgtt acaaaggcga tccacaaaaa atgaatatgc acatgatgga gctttataaa
     4921 aaacatggtg caaatcctat gagtggttgt ttgcctatac ttttacaaat tcctattttc
     4981 tttgctattt atcgcgtttt gcttaatgct attgagttaa aagcagctcc ttgggcgttt
     5041 tggatacatg atttatcggt aatggatcct tattttattt tgcctatttt aatgggtgta
     5101 acgatgtttt tacaacagct tattacacct atgactatac aagatcctat gcaagctaag
     5161 attatgaaat ttttaccagt gatttttact tttttcttta tcactttccc agcaggactt
     5221 acgctttatt ggtttgtaaa taacctttgt tctttggttc aacaatgggt tatcaataaa
     5281 atatttgcca aagaacatca caaaaaacaa gcggagcatg aaaaatgaaa atcgaagcca
     5341 ttgatcttca aagtgcctta acagaagctt caagaagttt agaatgttct gtgatggact
     5401 tagaatatga gattattcag catccaagaa aaggtttttt tggatttgga agaaaaaagg
     5461 caattataga ggctaaagca aaaaaaagga ttttgaaaaa aaatcctaaa aaagaatttg
     5521 caagttcaaa aaatcacaaa ccagaaacac atgagccaaa acaagaaaac aagattgaaa
     5581 taaaaaatga aaaaaataaa attcaaaaag aaaaatacac agtaaaaagt gatgaaattt
     5641 ttgatagttt tcatcgagaa agcaaaggag tgcgtaatac tcaggatatt ttagatgaga
     5701 ttcgtattca gcttgtaaaa cttttagaaa gctcccagtt taaaatagag cttagtgaac
     5761 ttagaatgta taatgaagat tgtgttttga ttcgattgga tggggaagat gctgctttga
     5821 tgataggcaa agaagcgcat cgttacaagg ctatttctta tcttttgcat aattggatca
     5881 atttaaaata taatctttta gtacgccttg agatcgctca atttttagaa aatcaaattc
     5941 aaggtatgca gctttattta caaagcgtga ttgaaaaaat taaaattcat ggacgcggac
     6001 aaaccaaacc tttagatggg gttttgataa aaattgcttt agagcagtta agagctgaat
     6061 ttccagataa atatgtagga attaagcaaa ataatgatca aagatttgtt gtaataaacg
     6121 actttttcaa aaaagatgag tgatactata gcggctattg ccacagctca tggtgtgggt
     6181 tcgatttcta ttgtaagatt aagcggtgaa agggctttag aatttgcctt aaagcttagc
     6241 cacaaaacca aactcacccc ccgccatgct acttttacaa aactttttaa tcaaaataat
     6301 gaaattattg atgaagctat aatgatatat tttaaagccc cttatagttt tacaggggaa
     6361 gatatagtag agtttcaaac tcatggagga tttagtgtga gtgaagtttt actcgaagaa
     6421 cttgtaagtt taggagcaag acttgcttta gcaggggaat ttagcaaaag agcgtgttta
     6481 aatggtaaaa tgactccttt aaaagcttta aatatacaag atctcatact ttcaaaatct
     6541 gcacttgcag ctaaaattat agcacgcaac atgcaaggaa acttaggaga acttttagaa
     6601 aaaattcgca cagatttggt taaaaccttg gcttttgtag aaactagcat tgattatgct
     6661 gatgatgatt taccttctga tttattagag caaatttcta ctatgtgtga agaaaattct
     6721 aaaattttaa aagaaattta tacgctttct caaagcaaaa aaggactcat agaaggtttt
     6781 aaaatcgcta ttgtaggtaa gccaaatgta ggcaaatctt cgcttttaaa tgccttgctt
     6841 tcttatgaaa gagctattgt ttcagatata gcaggcacca ctcgtgatac tatagaagag
     6901 agctttaaat taggaacgca tttattacgc attatagata cagcgggtat tagggaaagt
     6961 aaagatgcta tagaacaaat cggcgtagct ttaagtaaaa aaagtttaga agatgcagat
     7021 attattttgg cagtctttga tgcttcaaga gtgcaagata aagaagatga gaaaattttt
     7081 gacttattag caaatactga taaaaaaatc ttttggattt taaataaaag tgatttagaa
     7141 aatgttttca aaaatactca aaataaaaat tttatcaagc ttagtgctca aaaagatatc
     7201 actttgttaa aagaagaatt gcaaaattat cttaattctt ttgatagcga aggtattatg
     7261 gtaagttctt tagatcttat taatgcttgc aaaatttcaa gtgaagcgat ttttagagct
     7321 aaaggacttt tagaggaaag ttctttagaa ctttttgctt ttgaacttaa tttagctatt
     7381 aatgaacttg caagatttac caaagatttt caaagagatg aaattttaga cgaaatgttt
     7441 ggtaattttt gtttaggaaa atgaaaggat aaaaatggat aaagaaacca taaaagcaca
     7501 taaaatcagc gatgaagaat atgcacaaat tttagaaatt ttaggacgag aaccaaatct
     7561 gttagaactt ggggttattt ctgcgatgtg gagtgagcat tgctcttata aatccagtaa
     7621 aaaatatctt aatggttttc caactaaagc accttgggtg attcaaggcc caggagaaaa
     7681 cgcaggggtt attgatatcg ggcaaggtat ggcagcagtt tttaaagtag aaagtcacaa
     7741 tcatcctagc tttatcgaac cttttgcagg tgcggctaca ggagtagggg gaattttgcg
     7801 tgatgttttt actatgggtg caagagtggt tgcggggcta aattctttaa aatttggcga
     7861 tattcatgat gaaaaatgtg gcaaacatca aaaatacctt gttaaaggcg tggtaaatgg
     7921 aatttctcat tatggaaatt gcatgggtgt gccaactata ggtggagaat gtgcttttga
     7981 tgagtgtttt aatggaaata tcttagttaa tgcctttgct ttaggggttt gtaaaagtga
     8041 agatatcttt tatgctaagg ctgaaggtgt aggaaatcct gtgatttatg tgggttcaaa
     8101 aacagggcgt gatggacttg gtggagcggt tatggcaagt gatagcttca atgaagaaag
     8161 caaatctttg cgtcctacag tgcaaattgg cgatcctttc agtgaaaaac ttcttatgga
     8221 ggcttgttta gagcttttta aaaccgatta tattgtgggt attcaagata tgggtgctgc
     8281 agggcttact tcaagttctt ttgaaatggc aggaagaagt ggcagtggca tgaaacttta
     8341 cttagataaa actcctatgc gtgaaagcgg tatgactcct tatgagttaa tgcttagcga
     8401 atctcaagaa agaatgctta tttgtgcgaa aaaaggctat gaagataagg ttatagaaat
     8461 tttcaaaaaa tgggatttag atgctgtggt tatgggtgaa gttaccaata caggaaaaat
     8521 ggagcttttt tggcatgatg agcttgtagg gcttattcct atcgagcctt taagtgaaaa
     8581 ggcaccgatt ttaagccgtc ctacaagcga gccaaaatat ttaagtgaaa ttaaaaatta
     8641 taaatttgag ttaaaatcaa gcattcaaga gctttttata caaatgcttc aaaatgaaaa
     8701 tattaataat aaagctttta tttatgatca atttgattca agcgtgcaaa ccaataccat
     8761 aaaagctgat ggaaaattag gtgctagtgt tattcgtatc aaagaaaatg gtgcaagtgt
     8821 ggctatggct atagaatgta attcacgctt aaattatgta aatcctaaaa taggagcagc
     8881 tttagcagta gcttctgcag gaagaaaagt tgcttgcaca ggagctaagc ctttggcaat
     8941 aagtgattgt ttaaattatg gaaatccgca aaatcctgaa gtgatgtggc aattcgcaca
     9001 aggttgcgaa ggtattaaag aagcttgtaa agagttaaat actccagtag taagcggcaa
     9061 tgtttcactt tataatgaaa ctgaaggcgt aagtatttat ccaagtccta ctatagtaag
     9121 cgtaggggtt ttagaagatg caaataaaac cttaaaagct agttttgaaa aagaaaattt
     9181 aagcgtttat cttttgggtg aaagtttagg agaatttggc ggatctatgg taatgaaaat
     9241 ccaagataaa aaagtatcag gaagtcttaa agagcttgat tataaagctg aacttgcact
     9301 ttgggatttg ctttataaag ccaatcaaaa ttctttactt gagtgtgcca atagcgtagg
     9361 aatagggggt attgctatga ctttggcaaa aatgtttgct atttctagtg tgggtgcaaa
     9421 tttaacaagt gattttgatg atgaaaaaat gatttttgat gagagtgcaa gtcgtgctat
     9481 aatagggctt agtaaagaaa atgaagaagc ttttttaaat ttagctaaag aatttggagt
     9541 aaaagcttat aaattaggtg tgagtacaag ccaaaaacat tttaaacttg atagcattga
     9601 gttaagcaag gctgaacttg ataagcttta ttttgaaagt tttaaagagc aaatccaatg
     9661 actttagttt taattatact cgttgttttg gtgttttact ggtattataa aacttgggga
     9721 aaacaggatt ttttaaactc agctacaaga ggagccaaag gctttgctaa gggttttgct
     9781 cgtggggtta tggaagaaag aatggatgag tttaaaaggc gtatgaatta ctatgttatc
     9841 gcacttttgg caaaaattgc aaaaagcgat ggcagggtaa gtgaaaatga agctgaaatg
     9901 atcaaagatc ttttagatgc aaatgccaaa gatgaaaaag aaagagcttt tttaaaagca
     9961 agttttaacg aacataaaga aaatttaagc gatgcttttt atgtggcaaa agatttttta
    10021 aaagaagtgc ctttgcctaa aaatgagcgt tttaatgtct tgcgtgtgct tgtttttatg
    10081 gctttaatcg atgcagattt taatgctaaa aagcgtgaaa ttttagagca aatcgctaaa
    10141 gcctttgata tagcaaaaag cgaactagac gcttttatag caagtctttc aaatttaaaa
    10201 agtactaaaa aagaattaag tcttgatgaa gcttttgcta ttttagaact tccaaataat
    10261 gcggatttaa atgcggtaaa aaaacaatac cgcaatttag caaaaaaata ccatcctgat
    10321 attttaaatg caaacaatgt tagcgaagaa gagcttaaaa tcggcgtaga gaaatttcaa
    10381 aaaatcaacg aagcttatga aaaagttaaa aaacatttag aaaggtaaaa atgagagcat
    10441 tacttagtgt gagtgataaa gaaggcatag tagaatttgg caaagagctt gaaaatttag
    10501 gttttgagat tctttcaact ggggggactt ttaagctttt aaaagaaaat ggaataaaag
    10561 ttatagaagt gagtgatttt acaaagagtc ctgagctttt tgaagggcgt gtgaagactt
    10621 tgcaccctaa gattcacggt gggattttgc ataaaagaag cgatgaaaat catatcaaac
    10681 aagcaaaaga aaatgaaatt ttaggcattg atctagtttg tgtaaattta tatcctttta
    10741 aaaaaactac cattatgagc gatgattttg atgaaattat agaaaatatc gacataggcg
    10801 gacctgcgat gataagaagt gcagcaaaga actataaaga tgtgatggtg ctttgcgatc
    10861 cacttgatta tgaaaaagtg attgagactt taaaaaaagg tcaaaatgat gagaattttc
    10921 gtttaaattt gatgataaaa gcttatgagc atacagcaaa ttacgatgct tatattgcaa
    10981 attatatgaa tgaacgcttt aacggaggtt ttggagcgag taaatttata gtaggacaaa
    11041 aagtatttga tacaaaatat ggagaaaatc cacatcaaaa aggggcttta tacgagtttg
    11101 atgccttttt tagagcaaat ttcaaagccc ttaaaagcga agcaagtttt aacaatctaa
    11161 ccgatattaa cgcagcttta aatttagcta gtagtttcga taaagctcca gctattgcta
    11221 tagtaaaaca tggaaatcct tgcggttttg ctataaaaga aaatttagta caaagctata
    11281 tacatgcttt aaaatgcgat agcgtcagtg cttatggagg agtggttgca atcaatggaa
    11341 ctcttgatga ggctttagca aataaaatca atgaaattta tgtagaagta atcattgcag
    11401 ccaatgtaga tgaaaaagct ttagccgtgt ttgaaggtaa aaaacgcatt aaaattttca
    11461 ctcaagaaag tccgttttta attcgcagtt ttgataaata tgattttaaa catattgatg
    11521 ggggttttgt atatcaaaac agcgatgaag taggcgaaga tgagcttaaa aatgcaaagc
    11581 ttatgagtca aagagaggca agtaaggaag aattaaaaga tcttgaaatc gctatgaaaa
    11641 tagcagcatt taccaaatca aacaatgttg tttatgtaaa aaatggcgct atggtggcta
    11701 taggtatggg tatgacaagt agaatcgatg cagcaaaggc agcaatcgct aaagctaaag
    11761 aaatgggact tgatttgcaa ggttgcgttt tagcaagtga agcctttttt ccttttagag
    11821 atagcataga tgaagcaagt aaagtagggg ttaaagctat agtagaacca ggcggaagta
    11881 taagagatga tgaagtggta aaggcggctg atgagtatgg tatggcgctt tattttacag
    11941 gagtaagaca ttttttacat taagtttaat ggaatgttat gttttttaca cataattcaa
    12001 taaaaattaa ataaattatg tgtaaaatat ttccgaaaaa ttttattttt aggaaactat
    12061 gatgtttaaa actataggat ttaaggtttc tgctgcaatt tttgtggtgt tgcttataag
    12121 ttttattgta atgcaagtga ttttaaattt ggactttaaa aatactgcca ataaaatgag
    12181 cagggcaaat ttagataccg taagtacttc tgtttttcaa acaatgagaa tggctatgaa
    12241 tttaggagat cctgaaaaaa ttaaagaagc cattgaagat gcaaaaagta tagagggtat
    12301 tagtgatatt aaaatttatc cttcaaaaga tactatagat ctttttgaga tgaaagcccc
    12361 tcaaatttca aatgataagc gtattataga acaattttca aatcctaaaa ttcaagcttt
    12421 agaagaaaat gtaaatggtg ttgtgcattt aagattgata cgccctttga ttgcagatga
    12481 aagttgtgtt gcttgtcatg caaatgctaa tgtagggagt gtgatagggg ttatggatat
    12541 atcgcattct ttagaaggtg ttcaaaaaga tataagtaaa accagtcaat cttatattat
    12601 aatatttact attgctttga tttttaccct ttgtgtggtt cttttaatgc ttaaagttgt
    12661 tgttggaaag cctgttttag agcttttaaa tcatgctaaa gaattagctc aaggaagtgg
    12721 caatttaaaa gctcgtattt cagttaaagg tcaagatgaa attgctttag cttgtggata
    12781 tatcaatcaa tttatcgaaa aaactcacaa ggcagttagc ggtgcaagtc ataattcaaa
    12841 aaatgtagaa aaacaaagca atcttttaaa ttcaaatgct atttctttaa gtgatatcag
    12901 ttcacaaagt cataagcaaa tagatcaaag ttttaaactt ggtgcaaatg ttggcaatga
    12961 acttggagaa cttgctagtt tgtcaaataa agcaaatagt gccaatgaaa aatccttttt
    13021 attattagaa caaatgctta aatctttgtt taatgttgct aataaagtat caacagtatc
    13081 ccaaaatgaa aatgaattgg ctaaaaaagt tgaaaacatg gtcaatcaag caggtaatat
    13141 acaaaaagca actcaaatga tggatgagat cgcagataaa accaatttac tatccctaaa
    13201 tgctggcata gaagcagcta gggctggtgc atttggacga ggtttttctg taattgctga
    13261 ggatgttagg cagttggctc agaacagtga agaatttttg ggaaatgtag ctcaaattac
    13321 aaaagagctt ttgcaaagta ttaatgaggt tagcgcagaa ttaaagaaaa atgctcaaag
    13381 tgtacaagct ttaaatgatg acaccgcttt attggttgat gatgctaatg aggttaaatt
    13441 atgtaacgaa gatgctaggg ctttggtaac tcaatgtact gaaaaaataa aaatttccca
    13501 agagaatata caaaatttac tttctcgtat gcaagaaaat gttgaagtaa gtgaaaagaa
    13561 tgaagaaatt tctaaaattc tgcttcaagt tgcagatgag ttaaaaatag tgtgtcataa
    13621 tctcgaaagc gaacttaacc aatttcaaat ttaaaggaat aaaatgaaaa aaacgcttca
    13681 aattgcttta gcagcagctt tttttgcagg ttgtgctagt acttctgtta cttcatctac
    13741 ttctaaaggt aataatgaac ttgtgcaaaa tcagcttttc aaaatagaaa aaattatagt
    13801 taatggtaaa acttttgatc caaaaaacgc agaggaaagt ccaaatatca gttttgaaaa
    13861 taataaattt tatggttatt caggatgcaa tcgttttttt ggttcttacc aaactaaggc
    13921 ggatacttta caaatcgaag gtgatcgcgt agcttcaact caaatgcttt gtcacccaat
    13981 ggatgtaatg gattttgaaa attctttcct ttcaaatttc aaaggaactt ttaaaatttc
    14041 aaatgaaaat ggaaaacttg ttttaagcaa tgatgaaatg aaaatctttt ttaaataata
    14101 ccctaaagcc tcgaaatatc gaggcaaact tcttaaattt gacaaaagtc taaaaaatga
    14161 tacaattata attttattat caaaaaaggt agttaaatga taaaatcaat tcctgaatgg
    14221 agtgagcaag aatacctcat gctttcttta cctcatgaaa aaagcgattg gaatccctac
    14281 ttagaggaaa ttttacaaag ttataaagaa tttgtaaaag cagtgagtga atttcaaaaa
    14341 gttttactta tagctcctaa acagagtgat tttgaaaatt ttaaagatat aaaaaatgta
    14401 gagtatttta aatgtgatac caatgatact tggatacgtg attttggagc tatagatata
    14461 gtggaaaatg gtcgctttaa ggctcttgat tttactttta atgcttgggg aaataaattt
    14521 caaagcgagc ttgataatgc tgtaaattct aagcttttta aagaaaaatt taaagaggag
    14581 cttaaaaagg ttgattttat tttagaagga ggaagtattg actttaatgg agagggtgtg
    14641 atgcttacaa gctctcattg tcttttaaat gaaaatagaa attctcatct aaacaaaact
    14701 caaattgata caaaattaaa agaaattttt ggcttaaaac aaattatttg gctagaaaat
    14761 ggttttataa aaggtgatga tacagatcat catatcgata ccttagcaag atttatagat
    14821 aaaaatacca tagcgcattg tatttgtgaa gatgaagagg atgagcatta tttgccttta
    14881 caaaaaatga aagaagagct taaaaaaaca ggctttgatt taatagaact tcctatacct
    14941 aagcctttat gctatgaagg aagaagattg ggggcgactt atgcgaattt tgtttttata
    15001 aataatgctt taattgtgcc tttttacaag gataaaaatg atgaaatcat agctaaaaga
    15061 ctttctaaag ctttacctaa tcataaaatt ataggagtag atgcaagagt gtttttacga
    15121 caaaacggtt ctttgcattg ttcttgtcaa aatcgtttca aaggtttaag atgagtttgc
    15181 aaaaaaaagc aactcttgta gcaagtttat gtgctattgt tttagccttg gttaaattta
    15241 tagtaggctt aacaagtggt tctgttgcag tgctttcaag tgcgattgat tctttaatgg
    15301 attttgctat ttctgctttt aattttttag ctcttaaaaa aagctcacaa aaggcgaatg
    15361 aaaattataa ttttggtttt tctaaaattg aagctttaat gggtttgtta gaaggtgttt
    15421 ttatagttgg cgtggggatt tttatttttt atgagagtat tttaaagatt tattataaag
    15481 aagaaattaa agatttaaat tcaagcatct atgtgatgat ttttgcttta attatgactt
    15541 tttttcttgt acttttttta aattatgtag ctaaaaaaac caaaagtttg attatagaaa
    15601 gtgatgcttt gcattacaaa acagattgct taaccaatgc ttgtacttta ggggctttgg
    15661 ttttgattta ttttacaaat ttacatatta ttgatgctat ttttgggata gtgatcagtc
    15721 tttatacgga gttttctgct tttaaaatca ttaaaaaagc tttggctttt ttaatggatg
    15781 aggctttacc taagaaacaa gtggataaaa tttgtacttt gatttctaat aatcctgaaa
    15841 taatttccta tcatgaatta aagacgcgta aaactccaag ttgtaattat ttaagcgtgc
    15901 atttggtttt ttgccctata atttcgcttt taaatgcgca taaaatttca gatgaaatag
    15961 aagaaggtgt gcgtaagatg tttgaaaatg aaaaatggga tatacaaatt catttagatc
    16021 cttatgatga tgcagaacaa gaaaggcaaa gacaatgaaa atcgctttaa tacaacaaaa
    16081 atttcactca aacaaagaac aaactataaa aaaaacttgc gaatttatag aagaagcctc
    16141 taaacaagga gctgagctta tttgtttggg agaacttcat caaagtgagt atttttgtca
    16201 aagtgaaaat gtggattttt ttgactatgc taatgattat gaaaaagatg tgaaattttg
    16261 ggcaaatata gctagaaaaa atcaaatagt gcttattact tcattatttg aaaaacgaag
    16321 tgctggactt tatcataata ctgcagtggt ttttgaaaaa gatggttcta tagcaggcaa
    16381 atatcgcaaa atgcacatac ctgatgatcc ttgtttttat gaaaaatttt attttactcc
    16441 tggagatttg ggttttgaac ctataaatac aagtttaggc aagcttggag tgcttatttg
    16501 ttgggatcag tggtatcctg aagcagcaag aattatggct ttaaaaggag ctgagattct
    16561 tatttatccc acggcaattg gttggtttga taaggataaa gatgaagaaa aacaaagaca
    16621 gctcaatgct tggcttggcg tacaaaaagg acatgctata gctaatggtt tatatgtagt
    16681 agctatcaat agagtaggtt ttgaaaaaga tgtaagcggg gtagaagagg gcattagatt
    16741 ttggggaaat tcttttgttt ttggccctca aggtgaagaa ctttgtcttt tagattctca
    16801 aaacgaatgt gtaaaaatca tagaaataga taaaaaaaga agtgaaaatg tgcgtcgttg
    16861 gtggcctttt ttgcgagata gacgcataga atattttgca gatttaacta aaagatttat
    16921 tgattaaatc aataaatctt atttgttttg tatattttca agatagcttt ttatttgctc
    16981 tttttcttgt tcgtttaaat ttataaaact tatttcttta agtcttgata aaagcaaatt
    17041 atcttctaaa atttcatttt ttcctatttc taaagaagtg atgacgctag aacttatgag
    17101 aagtctttgg gttgtatctt ttcttaagcc ccatatatta tgtatagcaa tattattatc
    17161 tgcaatttgt cctacataaa gcataatatg tccaggtaaa taaagtaaac taagataagc
    17221 tttcccaaag cggtttaaaa aatctttttt ttgagaattg ctaagagtgc ttatatcaaa
    17281 atgattaaaa gaattttttt gtgcagctga atttcttggt agataaagtc caaaagctga
    17341 aaagatatca cgagttagta aagaacaatc tctttcaaaa ttataaccgc cccagccata
    17401 aggcaaattt aaaacttgtg aaagttgatt ttttaaattt ttatcattga attgtaaagg
    17461 aaatttagat acatcttttt tagaaatttt atatttttta gagcctattt ttccataaaa
    17521 atagttttta tcttctttgt agtaaggata aatagcgcca attctacttt caaagaaaaa
    17581 tttaccatcc tcgctataga taggaaattt ttcttttagc ggtgtgataa agttgagatt
    17641 ttcatagatt ttcgctctat cgtttgagaa aaattccaaa tttttacttt caacaaatcc
    17701 aaatccagct tcacctaaaa caaaagcata acgcttatct ttactaaaat gtgaaattaa
    17761 gacaggggtt ccagcattta aaatgccatc gcttgcatag tcaaaaggaa ttccttcatt
    17821 ttcaaaaaaa ggatttttta agatagctct ttgggttgga agatttttaa tgattgtatt
    17881 ttggataatt aaagcttttt gattaagttt gccaaattct tggatatttg cgttatttgt
    17941 agcgttttta aaccatgaaa gtggaataat ttgtttattg aaaaaataat aagtattttt
    18001 tgaatttaaa tataagggaa aggaccaaaa aatattttgt cctttgtaat ttttaaacga
    18061 atcatgccaa gggttaaaga aatatttttt atatcgtttt gcatcaaaat taatatcgta
    18121 agcaaattgt ggcaaaatgc ttacattttg ttcgtattca agttttgcat aatgttgatt
    18181 ttcatttttt tgttctaaat tttcatgatg aagtgaagtt aaattttttg ttgaacaagc
    18241 tg
//
LOCUS       DARBAC010000026        18153 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.026, whole genome shotgun sequence.
ACCESSION   DARBAC010000026 DARBAC010000000
VERSION     DARBAC010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18153
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.026"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..366)
                     /locus_tag="SB799_000647"
     CDS             complement(<1..366)
                     /locus_tag="SB799_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867900.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFVYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRAVAQLFKTLKTHEKIPH"
     gene            complement(356..718)
                     /gene="dksA"
                     /locus_tag="SB799_000648"
     CDS             complement(356..718)
                     /gene="dksA"
                     /locus_tag="SB799_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HEG0867901.1"
                     /translation="MKKNEIQNFKNILEERKKTILENLQSNSNEIEALHNSVPSDSVD
                     FSIIETGSQIDFTISTNLKEELIEIENSLDKIKNGTYGICESCDDEIDSQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            complement(730..1179)
                     /locus_tag="SB799_000649"
     CDS             complement(730..1179)
                     /locus_tag="SB799_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEG0867902.1"
                     /translation="MQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKELTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(1181..2023)
                     /locus_tag="SB799_000650"
     CDS             complement(1181..2023)
                     /locus_tag="SB799_000650"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEG0867903.1"
                     /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAVQRAITSKTPLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(2032..2754)
                     /locus_tag="SB799_000651"
     CDS             complement(2032..2754)
                     /locus_tag="SB799_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEG0867904.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDENQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKDNPKQMILDPLDGSSNFVSKIPFYGTSIALI
                     EKDQAKSAFVCNLVSQEIFAFNNNQSFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTVAALTIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(2754..4973)
                     /gene="bamA"
                     /locus_tag="SB799_000652"
     CDS             complement(2754..4973)
                     /gene="bamA"
                     /locus_tag="SB799_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEG0867905.1"
                     /translation="MKKHLISICALVAIANAATIKDIKFIGLNHLSNTSAINITGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNRILEIIVTEKPTIAKVTITGIASNDRK
                     QVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLINPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITVGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNNTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            5050..5877
                     /locus_tag="SB799_000653"
     CDS             5050..5877
                     /locus_tag="SB799_000653"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEG0867906.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALRL
                     GLIHELIEFKDLALCDMIFVATPVNAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            5957..7330
                     /locus_tag="SB799_000654"
     CDS             5957..7330
                     /locus_tag="SB799_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0867907.1"
                     /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHVKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGRIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKV
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            7330..8214
                     /locus_tag="SB799_000655"
     CDS             7330..8214
                     /locus_tag="SB799_000655"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEG0867908.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDDRGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYISYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            8253..8654
                     /locus_tag="SB799_000656"
     CDS             8253..8654
                     /locus_tag="SB799_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HEG0867909.1"
                     /translation="MIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            8663..9541
                     /locus_tag="SB799_000657"
     CDS             8663..9541
                     /locus_tag="SB799_000657"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEG0867910.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALVKKMQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            9566..9823
                     /locus_tag="SB799_000658"
     CDS             9566..9823
                     /locus_tag="SB799_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEG0867911.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEKEDKILQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            9810..12422
                     /gene="infB"
                     /locus_tag="SB799_000659"
     CDS             9810..12422
                     /gene="infB"
                     /locus_tag="SB799_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEG0867912.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKVEKENAKEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKN
                     SNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDIS
                     LDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPPKK
                     IEKKEVEEVSSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEI
                     LAAEFGIEINIINEADEFDYVKDYEEEIDEKDLVTRAPVITIMGHVDHGKTSLLDYIR
                     KSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVA
                     ADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSY
                     EFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATIIV
                     QNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAV
                     KTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLE
                     ALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAK
                     DKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMV
                     TEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGD
                     YIESYKEVQEQASL"
     gene            12419..12781
                     /gene="rbfA"
                     /locus_tag="SB799_000660"
     CDS             12419..12781
                     /gene="rbfA"
                     /locus_tag="SB799_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEG0867913.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            12771..13193
                     /gene="rimP"
                     /locus_tag="SB799_000661"
     CDS             12771..13193
                     /gene="rimP"
                     /locus_tag="SB799_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEG0867914.1"
                     /translation="MNLEALCKEAELSFYDDELVSENGRKIYRIYVQKEGGVNLDDCA
                     RLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSRIEHFAKSIGELVKITTNEKEKFE
                     AKIIAVDDENITLENLENKEKTTINFNDIKKARTFIQW"
     gene            13252..14823
                     /locus_tag="SB799_000662"
     CDS             13252..14823
                     /locus_tag="SB799_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002885414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0867915.1"
                     /translation="MLENKCDWKISKADQNGNVYYYFPKDEDEFKEAVVKNGGMSVYV
                     YQEGKFIDEFHTKSQGDKWTSSILNYLKTMSKDGGIFYRYYKNCKFFAIPKNTFSKDD
                     FKIIKDNINNNIPLNQILYGPPGTGKTYHTIDKALEIFGENLESRDEKKAKFDEYARK
                     GQIVFTTFHQSYGYEEFVEGIKPVMNNEANSQEIQYKIKDGIFKDFCDKALVVKQNFN
                     FNQIKDDFLDHCREKKSIIYKNKEYKFEEPNNLITGNLKIHINYIRDMIEQIGLSYGN
                     LSDIEIEGYIRLKIDSGDNIINNYKIILDYFYYKYINFSFVFVIDEINRGNVSKIFGE
                     LITLIEPSKRIGEKEELKVKLPYSGEEFGVPKNVYIIGTMNTADRSITSLDTALRRRF
                     EFIEMMPDVSKLSMDCEGINLQELLKAINTRIEYLLDREKTIGHAFFISVENLESLKK
                     VFKNRIIPLLQEYFYNDYALIDAVLNKNGMLEISVENKDYLKNMTEFIESDKVVYKFS
                     DSNNWSKDTFIKIYE"
     gene            14823..16160
                     /locus_tag="SB799_000663"
     CDS             14823..16160
                     /locus_tag="SB799_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HEG0867916.1"
                     /translation="MKTSNTFSIIEHQAFSKEDLKEIFKEKAEGFYKDLEDFAKNNEN
                     LLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLKRYYEL
                     DNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFL
                     DEFDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKRNLIHKERFFTSNDEFVLDIAP
                     NRLIKSTLNFLKSKTSLNKFRLIKAMQMLDEVEFSKNYEKDFSYKISRHFDYYENLLL
                     WCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPTQDIKVQNNGKYLI
                     SKNDEKCFMLKPDLYIENKMILDTKWKIPNDSEDEKKQGIEQSDLYQMFAYACKFKIY
                     DIKLVYPLCEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVLFAPLPF"
     gene            complement(16149..16952)
                     /locus_tag="SB799_000664"
     CDS             complement(16149..16952)
                     /locus_tag="SB799_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEG0867917.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLVHLIGKFLKR"
     gene            complement(16945..17799)
                     /locus_tag="SB799_000665"
     CDS             complement(16945..17799)
                     /locus_tag="SB799_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEG0867918.1"
                     /translation="MLFFEISNLNYTYDNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKALQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YGKKDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEENCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            complement(17812..>18153)
                     /locus_tag="SB799_000666"
     CDS             complement(17812..>18153)
                     /locus_tag="SB799_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEG0867919.1"
                     /translation="SLNLQIASKLEKLKNRDFVVYHPSWTYFAKRYNLTQIPVEILGK
                     EPKSKDLQKLITLMKDKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDWENEL
                     LKTADAFSHNL"
BASE COUNT         6633 a         2395 c         3090 g         6035 t
ORIGIN      
        1 gtgtggaatt ttttcatgtg tttttagggt tttaaaaagt tgtgccacag ctctaaattc
       61 ttttgtttga aaagtggttt taagatcttt ttcaaggagc aaatcttgag tataagcttc
      121 aaatttagct gcatctttaa aaaaatgctt aaattttaaa taacgcaaaa atccataaaa
      181 tgctatgtgc aaaacggcta aaatcatata aacaaataaa ggaataacaa gccatatcat
      241 aataggtagt tcaaaggtat aagtactgat atttagagta tagcttccta gttctagatg
      301 ccaagcaaag gcaaaaataa gtgctatata aataaaactt gcaagtaaaa agagtttaat
      361 tttcatgttt ttttccttgt tctgcaattt gacggcaagt gatacaatat cttgcgtgag
      421 gtttgacttt tagtctttga gagtcgattt catcatcgca agattcgcaa attccataag
      481 tgccgttttt gattttatct aaagaatttt cgatttctat aagttcttct ttgagattgg
      541 tgctgatagt aaagtcaatt tgagagcctg tttctatgat agaaaaatct acactatcgc
      601 ttgggacgct attgtgaaga gcttcgattt catttgaatt gctttgcaaa ttttctaaga
      661 tggttttttt tctttcttct aaaatatttt tgaaattttg tatttcattt tttttcattt
      721 taaaactttc tatttgtgat aagggtgatt gttgttgatg caaaatgcac gataaatttg
      781 ttctaaaagt aaggttttaa caaattgatg tgctaaagta agtttgctta atgatagtct
      841 aaaatccaaa ctttgattaa attcttctct taaaccataa gcaccaccta taaaaaaact
      901 taattcattt ttatcttgga tgagttttgc aaattctata cttgtaagtt ctttcccttt
      961 ttcatcaaga gcgatacaat agcctttttt ataaggcata aaagcttctt catagctttt
     1021 ttttgcttct atggcattta aattttgagc taaggctatt tttttattaa aaacatttat
     1081 ttcttttaaa gtggcgtatt tagaaataag tttagagtat ttctcactcc aagttttaaa
     1141 ttcatcactt ttttgaatac aaaagatatt aacttgcaaa ttattttcca ctgaaaaatt
     1201 ttagcacatc gctaagatat tgtttttgtt ctcctctttc aactatggca tctataagtc
     1261 catgttctaa caagaactct gctttttgaa agccttcagg taaatctgct cctatagttt
     1321 gtttaataac tcttgcacca gcaaaaccga ctaaagcttc aggttcagcg atgattaaat
     1381 ctccaagcca agcaaaagaa gcacttactc cgcccatagt aggatcagtt aaaatgctaa
     1441 tataaggaag tttttctttg ctaagaagtt taagtgcggc gctagttttg ctcatttgca
     1501 tcaaagaata agtactttct tgcattctag ctccaccgct tgcacttacg atgacaagag
     1561 gggttttgct tgtgatggct ctttgtacag ctctaacgat tttttctcct tcaacagaac
     1621 ctaaagatcc gcccataaaa gaaaaatcaa atacaacaag ttgggttttt aaaccattga
     1681 tttcacattc tccactaata acagaacttt ttctacctgt tttactttca ccttcgctaa
     1741 ggcgtttttt ataggattta ctatcaacaa attttaaagg atctatagcc tctaaatttg
     1801 catcatactc aataaaactg ccttcatcgc ttaaaagttt aatacgttca tcagctgaaa
     1861 ttctcatgtg ataattacat ttagggcaaa cattaaaaca agattctatt tctttataat
     1921 acatcaaagc atgacaactt tggcatttta cccagtgatt tggagcttct ttaacgctag
     1981 gttgttgtct tcttattttt gaaaaaatat ctgcaaaatt catatattca cctaattatt
     2041 ttttaaaaat tctaagatta tatcaaaaat tttcttgtct tggcttagga gaaggaaatt
     2101 ttcatttttt tctatatata aattttgatg aattgttaaa gcagctactg tatcaaaaat
     2161 tcgtgttttt ccaagaatta atacaaaact aaaatacgaa gcataagcga gacttaaggc
     2221 tgttgcgccc aaagagcgaa attttaattg attttttgtt aaaaaatcga gaagttctgg
     2281 ataaagtgaa attttttcaa ctatacctat tttagaaaat agattaggtg ttaagggtga
     2341 gtattttgga tcggaaagat tagatttaaa agattgattg ttattaaaag caaaaatttc
     2401 ttgactgaca agattgcaaa caaaagcgct ttttgcctga tctttttcta tgagagctat
     2461 agaagttcca taaaatggta ttttagaaac aaaatttgaa cttccatcca aaggatcaag
     2521 aatcatttgt tttgggttat ctttcccgat caagccactt tcttcagaaa aaatttgccc
     2581 aaaacaacta agatatttta tgaaaatttg ttcacatttt aagtcaagct catagccttg
     2641 attttcatca tagcctaatt tagagcaaag tttaagatca ttttgtggga tattgtttag
     2701 atacttgcgt atttgcaaat ttgcattcaa gcaagcatct aaaaattctt tcattaaaag
     2761 cgtgttccaa gattaaattc aaaactatta gtatcatcac cttttttatc attaagaggt
     2821 ttggcaaata caagctgtaa aggtccaatt ggtgtaatcc attcaatgcc tatacctgta
     2881 ctcattcttt ttatttcatc taaattttta cgccctatca taccataatc aaaaaacacg
     2941 ctaccacgaa gtttgattct atcaatcaaa gggaagctaa gttctacgga attggcaaaa
     3001 gctatggttc cacctacttc atctccccat tggtttttag gacttaccgt tctgctttca
     3061 aaaccgcgta tcgatctaat accacctaaa taaattcttt gattaattgg caaatagcct
     3121 tcatcccata ctttataaaa actcgcttta tagcgataaa taagatcata tcctatatag
     3181 tcttgcaaac cttgataaaa gttaaattta gagcttgatg aaataaattc ttgatctccg
     3241 ccaagtccag cgtattctaa actagttgaa gcaatgatac ctgatcgtgg cagataataa
     3301 tcatctgtat tgttaaaggt gattgctgga gttatagagc ttttaatact tttgccaagt
     3361 tcatatcctg ttcttaaaag agttggactt aagtgatata tatcgctttg ttcaagatta
     3421 taagttaagc ttacattata gtatcttgca aattggcgtc caactgttat atcaaagccg
     3481 taattttttt ctgaataatt atcccattca tagtcatttg aataaagtgt tccacccaga
     3541 ctatattgac tatcaagaac gcgtggattt atgagactaa tccttcctga taaggtatca
     3601 tcgcttttat ctacgcttac agagcttttt attcctgaac caaagatatt tgtatctgat
     3661 aaagaagcat taagtaaaat accatcgctt gatccatagc caatacctcc agaaatagct
     3721 cctgtagaag cttctttaac atcaacaatc aaatcaatat gtgtatcatc aactttttct
     3781 tctttaatat ttacatcgtc aaaataagaa gttcttttta aagcattttt tgactcgctt
     3841 aagtctgttc tattgtataa attaccttct gttatatata attctcggcg tatgacgcga
     3901 tctacagtac gtgaatttcc tgaaataata acatttctta tataaacttt atcatgaggg
     3961 attactttaa atacaacggt ggcttcttga gtttgatcat ttttttgaat atcaggatag
     4021 acttctacaa acgcatagcc taaatcagca ctttgtgttt ctatggtttt aacatctttt
     4081 ctaatgtctt cgatattgat agttttgcca gcacttgatc ttaaatcttt tacggtttgt
     4141 gcattttgtt tatcatcaaa taaaggattt tctatgctta tacttttaat tttataaggc
     4201 tttccttctt tgataaaata agtcaaattt gcttgataag tatctgtgta ggttttaaga
     4261 taaggcgagg atacttgaac atctaaatat ccttttttca tatattcatc agcaattctt
     4321 gaactatcgt tactaagttc aaaaactttt aattttccat cattgcgtcc ccacatccat
     4381 cccataaatt ctttttcttt gttaacaaca gcaggttcta tatcagaata tgaaaatttc
     4441 ttggctccac ttaaatgaac attatcaata atgatatttt cgccacgatt tactataaat
     4501 tcaagctcta gtccatcggt attttctaaa gtcttttttt tgtattctac aatagtatca
     4561 aaataacttt ttgcttcata ataagcttta atgcgttcaa tagcttcttt tatacttcct
     4621 tcatcaagta gtgtgcctct tttaatccct aaaatacttt caacttgttt tctatcattt
     4681 gaagctatac ctgtgatagt aacctttgct atagttggtt tttcggtaac tataatttcc
     4741 aaaattctat tgttgttttc tactgcaata ttttcgaaat aattttgttt ataaagatta
     4801 agaatagcag tgttgatttt tgcaggattt atttcctcgc ctattttaag ccccgtgata
     4861 tttatagcgc ttgtgttcga taaatgattt aatccgataa atttaatatc tttaatggtt
     4921 gctgcattgg ctatagcaac taaagcacaa atactaataa gatgtttttt cattgatttt
     4981 ttacctaaag ctttattaaa agctgtataa tagcaaaaaa aatttaacaa aaaaactaag
     5041 gtagaaagta tgaaaatagc aattataggg cttgggctta tgggtggatc tttagggctt
     5101 tgtttgaaag aaaataagct tatttcttgt gtttatggta tggatttaag taaagaaaat
     5161 gaaaaagatg ccctgcgatt aggtcttatt catgagctta tagaatttaa agatttagct
     5221 ttatgtgata tgatttttgt cgcaactcct gttaatgcta ttatagaaat tttgcaaaag
     5281 ttagttgatt taccttctaa tgtaacaatt atagagcttg gaagtacaaa aagaaaaatt
     5341 atagaaagtt tgcctaagaa tttaatcaaa caaactcttt ttgctcatcc tatgacagga
     5401 actgaaaatt caggtccaaa agcagctttt aaagagcttt ataaagatgc agtttgtgtt
     5461 ctttgcgata gtgaaatagc tgatgatttg catcaaaaaa gagcggtaga aattttttct
     5521 catttaggga tgaaaattgt ttttatggat agtaaagccc atgatcatca tgctgctatc
     5581 atttcacatt tgcctcatgt tataagtttt tctttggcaa attttgtaat gaaagaagaa
     5641 gataaaagaa atattgttca tttagctgga ggatctttta aaggtatgag cagaattgcc
     5701 aaatcatcgc cacaaatgtg ggaaagtatt tttttacaaa ataaagataa cttattaagt
     5761 tctattgatt tttttcaaca agaattagag agatgtaaac aaatgataca attagacaaa
     5821 aatgatgaat taagagaatg gatgaaacaa gctaatactc taagagaaat tttataaatt
     5881 tgctagatat ttactgaaaa tataatagaa tttatactaa aaacaacaaa aacattgaaa
     5941 atttttaagg aaggttatgg caaaaagaaa aggcaaaact tatttatctg ttttaatttt
     6001 agttttaata gcaattttga ttttttttat ttcaagatta agtatttttg aaaaaaatcc
     6061 tcctcaaatt ttaatgccag atgttgtata tactgatctt aaaaaaccta ttttagtgca
     6121 tgttaaagat gatgaaagtt ctatcaaaaa tgtacaaatt atattgcata aagacgacaa
     6181 tactagtgca atggttatag cagatgaaaa gatttctaat ttaaaagata ttaccttaca
     6241 agttgctttg ccaaaatttg gttacaaaga aaatgtaaaa tcttttgttt tggaggtgat
     6301 agctaaagat tctagttttt ggaatttttt tagtggcaat gaagcaagaa aacaaattgc
     6361 ggtattagta gataatacgg ctccaaaaat caatatcata agcaattctt accaaatcga
     6421 gcaaggcggt gccggggctg ttgtttttaa ggccgatgat gctaatttag ataaggtgta
     6481 tatagaaaca aataaaggta gaatctttaa agccacacct tatgtaaaag aagggtatta
     6541 tgcggctttg attgcttggg atgcaagaga tgaggaattt cgcgcatttg ttatcgctac
     6601 ggataaagtg ggaaatattt caaaagaacg tataaggtat tattttgtta atcgtaaata
     6661 tcgtgtttca aatatcaatc taacggataa atttttagat ggaaagattg agaatttagc
     6721 aaatcaatac gctccaaaag ataataatct caatcgttat gaaaaattta agtttgtcaa
     6781 tgaaacttta agaaatagca atgaagaact tatccatgaa atcacttcaa aagtacctga
     6841 ggaaaaaatt gataattttg atttgaattt atttttacct cttaaaaatg gtatgaaagt
     6901 agcggatttt gctgatcata ggtattattc ttataatggg caatttgtga gtgattctta
     6961 tcatatgggg cttgatctag caagcgtagc acaagctcct atcataagca ataacgcagg
     7021 caaggttgtt tttgctgctg aaaatggaat ttatggttta aatttaattg tttatcatgg
     7081 ttttggagta tatagtcttt atgggcactg ttcttctaaa aatgttgatt tagatgaaat
     7141 gattaataaa caaagcatta taggcaaaac aggaacaagt ggtttagcct taggtgatca
     7201 tttgcatttt ggagttttag ttcaaggagt tgaaacgcgt cctgaacaat ggcaagataa
     7261 aaaatggata gaaaataata tttacaatgt tttaaatgat ggtaaaaaga taattttagg
     7321 aaaaaattaa tgaaacaatt aactttagca aaaactgtca aaggcgtagg tataggactt
     7381 cataagggtg aacccataga aattacttta gagcctttag aagcaaatag tggtatagta
     7441 ttttttagaa gcgatcttaa tgcaagctat aaggcaagtc ctgaaaatgt gatcaatact
     7501 caaatggcaa ctgttttagg agatgatcgt ggatttattt ctacaataga gcatttaatg
     7561 agtgcgatta atgcttatgg aatcgataat gtacgcatag ttttaaatgc aaatgaagct
     7621 cctgttatgg atggatcaag tattagtttt tgtatgatgc ttgatgaagc aggggtaaaa
     7681 gaacttgatg cacctaaaaa aattatggta attaaaaagc ctatagaagt aagagatggt
     7741 aataaatttg tgcgtttaac tcctactaaa gaaccccgta ttaattacac aattaaattt
     7801 gacaatgctg ttataggtga acaaagttac aattttgaat tcagcaaaaa aaattatata
     7861 gaaaacatag caagggctag aacttttggt tttttaaaag atgttcaagc tcttaggagt
     7921 atgaatttag cactaggtgg aagtttagaa aatactatag tggtagatga aaatcgtatt
     7981 ttaaatcctg agggtttgcg tttcaaagat gagtttgtaa gacataaaat tttagatgca
     8041 attggagatt taaccttact tggatatcgt gtttttgggg attatatttc atatgctggg
     8101 agtcatcatt taaatcattt acttactaaa gaagttttaa aagataaaga tgcttatgaa
     8161 attgtaagcc ttgaaaaaac aacccaaaaa gcttatgaaa aggtatttgc ataaaaacct
     8221 ctcttttgct taatgcttta tctaagcctt taatgatcgg aatttatcaa gatgataaac
     8281 ttataaaaac ttataaaagt gaagaaaaag caagcgaatt tttaccaaaa attttagatg
     8341 aattgcttaa agaatatgat tttacaagtt taatctatgc taatggtcca ggttcttata
     8401 tggggattaa aatttcttat gtaagtttga gtactttaag tatagtaaaa aatattcctt
     8461 tatttgcggt gagtgctttt gaattaaatg gctataaacc cataagtgca aataaaaatt
     8521 tttgttttgt atataaggaa ggtgaaattt gtttagagca aaatatccca gcagagtttt
     8581 ttttaccaaa aaatttacaa gagcttaaac taaataatga taatcttccc ttttattttt
     8641 tagatgcaat ttaggatgaa atttgaaaat tttagttccc gctacgagtg cgaatttagg
     8701 gccaggtttt gattgtttag gacttagttt aaagcttttt aatgaaactc aaatccaaaa
     8761 atcaggtgtt tttagcatta gtattggagg tgagggcagt gataatattt ttcttaaaaa
     8821 aaacaacata tttgtaaata ttttttatga aatttatgaa aaactaagtg gaaaaaaaga
     8881 taattttcgt tttatttttc aaaataacat tcctctttca agaggattag gaagctcttc
     8941 agctgtgatt gttggagcta ttgccagtgc ttattatatg agtggattta aggtagaaaa
     9001 agaacgtatt ttagatgaag ctttaattta tgaaaaccat ccagataata tcgctccagc
     9061 tactcttggt ggttttgtgt gttctttggt tgaaaaaaat aaagtttata gtatcaaaaa
     9121 agagattgat aaagatttag ctgctgtggt tgtgatccca aatttggcaa tgagcacgga
     9181 acaatcacgc caagctttgg ccaaaaattt gagttttaat gatgcggttt tcaacctttc
     9241 tcatgcttca tttttaaccg cttgtttttt ggagaaaaaa tatgaatttt taaaatttgc
     9301 aagtcaagat aagctccatg aaatcaatcg tatgaaaaac ttacccgagc tttttgaagt
     9361 gcaaaaattt gctttagaaa ataaagcttt aatgagcaca ctttcaggtt caggatcgag
     9421 ctttttttct ttagctttca aagatgatgc tttagcttta gtaaagaaaa tgcaaacaaa
     9481 atttaaagat tttcgtgtgc aatatttaga atttgatgat aatggctttg aaatttgcta
     9541 aaaaatataa aaaaaagata taattttgaa aaaacatata ccaattagaa tgtgcatagt
     9601 gtgtaaaaac cgctttgagc aaaatatgtt atttagattt aaagttgttt taggagatat
     9661 tgtgcctaaa gcagaacatg gaagaagcgg gtatttatgt caaaattgta ttgaaaaaga
     9721 agataaaatc ttgcaaaaag cattttctaa aatatgtaaa aatttaaata ctaaaattac
     9781 tcagcaagga cttaaggaga tatttttaaa tggcaaagat tagaattcat gaaatcgcaa
     9841 aagaattagg ttatgatagt aaggaaatta ttgaaaaggc aaatgaatta gggcttggaa
     9901 ttaaaacagc atcaaatgct gtagaacctg agattgcggc agctatttat gagtatatac
     9961 aaacaagaga aattccagaa gcttttaaga aaaatatcaa aactcctaca gcaaaaaagc
    10021 ctaaaaaaga aaatataaaa gaacaagaaa agctaaatga atctgaaaaa aaagaaccta
    10081 aaaaagaaga aaagcttaaa caagaagtta aaaaagaaga attaaaagtt gaaaaagaaa
    10141 atgcaaaaga agaaaaacaa gaaattattg atgctcataa gccacaaagc cttgctagtg
    10201 caactttagc taaaagacgc ggacttgtta ttgttaaaaa gaaaaaagac gaagaagaaa
    10261 ttcaagttaa aaaagaagaa gtaaaaaatt caaatgatat atctatcaat aatgaagagc
    10321 gcttaagttt aaaaaccatg ttttcaaatg ctgatgagag tttaaagaaa aagaaaaaag
    10381 aaaaaaaatc ttttgtcgcg agtaaaaaag aaagtaccga aaaaatgaat tttttagatg
    10441 aacatgattt tggtgatatt tctttagatg atgaagatga ggtagtgttg cctgatttta
    10501 gtgtaaaaga acaagaaaaa ccacaaaata tcaataaaaa acaacctaat tttataagac
    10561 aagctgttgg aaattctgcg ggttttggac ttgaaggtgg aattcaaaga agaagtcgta
    10621 aaaaaccacc taaaaagatt gaaaaaaagg aagtagaaga agtaagtagc gttgctattt
    10681 ctaaagaaat tcgtgtgtat gaattcgctg ataagatagg aaaaagcact agtgaagtga
    10741 tttcaaaact tttcatgctt ggaatgatga cgacaaaaaa tgatttctta gatgaagatg
    10801 cgattgaaat tttggctgct gaatttggta tagagatcaa tatcattaac gaggctgatg
    10861 agtttgatta tgtaaaagac tatgaagaag agattgatga aaaagattta gtgactagag
    10921 cacctgtgat tactatcatg gggcatgttg atcatggtaa aacttctttg ttagattata
    10981 ttagaaaatc acgcgttgca agtggtgaag cagggggtat tactcagcat gtgggtgctt
    11041 atatggtaga aaaaaatggg cgtaaaatta cttttattga tactccaggt cacgaagctt
    11101 ttactgctat gcgtgcaagg ggtgcaagta tcactgatat tgtaatcatc gttgtagctg
    11161 cagatgatgg ggtaaaacca caaaccaaag aagcgataaa tcatgctaag gcagcaggtg
    11221 tgcctattat tattgctatt aacaaaatgg ataaagaagc agcaaatcct gatatggtaa
    11281 aaactcaact cgcagaaatg gaaatcatgc cagtagaatg gggcggatct tatgaatttg
    11341 taggggtttc ggctaaaaca ggaatgggga ttgaagattt gcttgagatc gtgcttttac
    11401 aagctgatat tttagaactt aaagccaatc caaaaagttt tgctaaagca agcattatag
    11461 agagttctgt gcaaaaaggg cgtggtgcgg tagctactat tatcgtgcaa aatggaacac
    11521 ttactgtagg aagtaccgtg gttgcaggtg aggcttatgg gaaagtgcgt gcgatgagtg
    11581 atgatcaagg taaagcttta aaggaaatca aaccaggcga atgtggggtt atcgtaggac
    11641 ttagtgaagt agcagatgca ggtgaaattt taatcgcagt aaaaaccgat aaagaagcaa
    11701 gagaatacgc taataaacgc cacgaataca atcgccaaaa agaacttagc aaatctacta
    11761 aagttagcat tgatgagctt ggagctaaga tcaaagaagg caatctaaaa gccttgcctg
    11821 ttattttaaa agctgatgtg caaggatctt tagaagcctt aaaagcaagt ttagaaaaac
    11881 ttagaaatga tgaaatcaaa gtgaatatca ttcatagcgg agtaggtgga atcacgcaaa
    11941 gtgatataga gcttgcaagt gcgagtgaaa actctatcgt actaggtttt aacatacgcc
    12001 caacagggga agttaaagag cgtgctaaag ataaaggcgt agaaattaaa acctataatg
    12061 tgatttataa tcttttagat gatgtaaaag ccttgcttgg tggtatgatg agtccgatta
    12121 tttctgaaga gcaattagga caagcagaga ttagacaagt gatcaatgtg ccaaaaatcg
    12181 gacaaatcgc aggttgtatg gtaactgaag gggtgattaa ccgtggagcc aaaattcgcc
    12241 ttatccgtga tggagttgtg gtttatgaag gcaatgtaag ttcgcttaaa cgctttaaag
    12301 atgatgctaa agaagtggca aaaggctatg aatgtggcgt aggtatagaa gggtgcgatg
    12361 atatgagagt gggtgattat atagaaagct ataaagaagt acaggaacaa gcaagtctat
    12421 gaatccaagt gagattaaaa aactacgcac tgaaagtatc ttaaaagagc tgatccctga
    12481 agctttagca aatttagatg atgaaaattt gaaaaatttg tgtgtagtgg atgtagagtg
    12541 taaaaaaggc agatacgatg cttttgtgta tcttgataag atgtttttta atgttcatga
    12601 gcaagaaaaa attttatctt ctttaaaaaa ggcaagtaga gctttgcaaa attactgcat
    12661 gagtgagcag ggctggtata ggtgcccgaa ttttcacttt aaatttgatg ataggcttga
    12721 gtatcaaaac catatggatg cactttttga aaaaataaaa aaggataaaa atgaatcttg
    12781 aagccctttg caaagaagca gaacttagct tttatgatga tgagctagta agtgaaaatg
    12841 gcagaaaaat ttatagaatt tatgtgcaaa aagaaggtgg ggtaaatctt gatgattgtg
    12901 caaggcttag tgaaatttta tcgcctattt ttgatgtaga accacctgta aatggggagt
    12961 attttttaga agtatcttca ccggggcttg aaagaaaact gagtaggata gaacactttg
    13021 ctaaaagtat aggtgaactt gtgaagatca caaccaatga aaaagaaaaa ttcgaagcaa
    13081 aaatcattgc tgtagatgat gaaaatatca ctttagaaaa tttagaaaat aaagaaaaaa
    13141 ctactataaa ttttaatgat ataaaaaaag ctagaacctt catacaatgg taaaaattta
    13201 gatttttatt ttatataatt aaaataaaaa caaaaaatca aaaggcatgc aatgctagaa
    13261 aataaatgtg attggaaaat aagtaaggca gatcaaaatg gtaatgtgta ttattatttt
    13321 ccaaaagatg aagatgaatt taaagaagca gttgtaaaaa atggcggtat gagtgtgtat
    13381 gtttatcaag aaggtaaatt tatagatgaa tttcacacaa aaagtcaagg tgataaatgg
    13441 acttcttcta ttcttaatta tttaaaaact atgagtaaag atggaggaat attttataga
    13501 tattataaaa attgcaaatt ttttgctata ccaaaaaata cattttctaa agatgatttt
    13561 aaaattataa aggacaatat aaataataat atacccttaa atcaaattct ttatggacct
    13621 ccagggacag gaaaaactta tcatactata gataaagctt tggaaatttt tggcgaaaat
    13681 ttagaaagta gagatgagaa aaaagcaaaa tttgatgagt atgcaagaaa gggacaaata
    13741 gtatttacta cttttcatca aagctatgga tatgaagaat ttgtagaagg tataaagcct
    13801 gtgatgaata atgaagcaaa ttctcaagaa atacaatata aaataaaaga tggaattttt
    13861 aaagattttt gtgataaggc tcttgttgta aaacaaaatt ttaattttaa tcaaattaag
    13921 gatgattttt tagatcattg tagagaaaaa aaatcaataa tatataaaaa taaagaatat
    13981 aaatttgaag aaccaaataa tttaattact ggaaatttaa aaatccatat taattatatc
    14041 agagatatga tagagcagat tggtttgtct tatggtaatt tatctgatat tgaaatagaa
    14101 ggatatataa ggttgaaaat tgatagcggt gataatatta taaataatta taagattatt
    14161 ttagattatt tttattataa atatatcaat ttttcttttg tatttgttat agatgaaatc
    14221 aatcgtggta atgtaagtaa gatttttggt gagcttataa ccttgataga gcctagtaaa
    14281 aggataggtg aaaaagaaga gttaaaagta aaattgcctt atagtggtga agaatttggg
    14341 gtgcctaaaa atgtttatat cataggcact atgaatacag ccgatagaag cataacttct
    14401 cttgatacag ctttgcgaag aagatttgaa tttattgaga tgatgcctga tgtgagcaaa
    14461 ttatctatgg attgcgaagg tattaattta caagaattat taaaagctat aaacactcgt
    14521 atagaatatt tactagatag agaaaaaacc ataggacacg cattttttat aagtgttgaa
    14581 aatttagaaa gtttaaaaaa ggtttttaaa aatagaatca tcccactttt gcaagagtat
    14641 ttttacaatg actatgcttt gattgatgcg gttttaaata aaaatggtat gttggaaatt
    14701 agtgttgaaa ataaagatta tttaaaaaat atgacagaat ttatagaaag tgataaggtt
    14761 gtttataaat ttagtgatag taataattgg agtaaagata cttttataaa aatatatgaa
    14821 taatgaaaac aagtaacact ttttctatca tcgaacatca agctttttct aaagaagatt
    14881 taaaagaaat tttcaaagaa aaggccgaag ggttttataa agatctagaa gactttgcaa
    14941 aaaataatga aaatctttta ggctttaaaa acaaaaattc cttaaaagct aaaaattatg
    15001 tcggcattat acagactaaa agcggggttt tggagatttt gccaaaatgc acgaatttag
    15061 atagctataa aaaagaagat agctcttcaa atcacgataa agaaaaacta aaaagatact
    15121 atgaattaga caatatttct aaaaataatg atttttatga aaaagatttt aaatttaatc
    15181 ccaaaaatct tttgataaat atgctaaaaa ccttaaaaaa ctcccccttt aaaaaatcgc
    15241 aaatttcatc tttgcaaagt tctaaaattc ctttatttga agtgtttatc actatgtttt
    15301 tagatgaatt tgatagcgta tataaaaaag gcttgatgag atcttatcta agttgcgaag
    15361 aaaatagggc ttttttaaag ggaaaattac tatttaacga gcatatcaag cgaaatttga
    15421 tacacaaaga aagatttttt acaagcaatg atgagtttgt tttagatata gcacccaatc
    15481 gcttgataaa atcaacgcta aattttttaa aatccaaaac aagtttgaat aaatttagac
    15541 ttataaaagc catgcaaatg cttgatgagg tagaattttc taaaaattat gaaaaagatt
    15601 ttagttataa aatttcaaga cattttgatt attatgaaaa cttgcttttg tggtgtaaaa
    15661 ttttcttaaa aaatgaaagt tttatgcctt atcatggtaa aaatgaagct tttgctttgc
    15721 tttttcctat ggagaaaatt tttgaagatt atgtagctta tatgctaaaa aaagtaaatc
    15781 caactcaaga tattaaagtc caaaacaatg gaaagtattt aatctcaaaa aatgatgaaa
    15841 aatgttttat gttaaagcct gatttatata tagaaaataa aatgatccta gataccaaat
    15901 ggaaaattcc aaatgatagt gaagatgaga aaaaacaggg tatagaacaa agcgatttgt
    15961 atcaaatgtt tgcttatgct tgcaaattta aaatttatga tattaaactt gtgtatcctt
    16021 tatgtgaaaa aactcaagat ttacaaagaa aaatcgcaga aaaatttttt gtttttaagg
    16081 caagcgaaca tttgtatttt aaagaacaag ggcaaaaaga tataaaagtg caagtgttat
    16141 tcgcaccttt acctttttaa aaatttgcct atcaaatgca ctaaaaaacc aaaacaagct
    16201 acagctatga tgcaagcacc gcttgagaga ttaagataat agctaagtat aagtcctaaa
    16261 acacaaaaaa tcatacttaa aaaacttgcc aaaatcatga taaagccaag tcttttagta
    16321 aaattttcag caataaagct tgggatacta agtaaagcca taaccaaaat aagccctaca
    16381 aggcgtatag aaataactat acaaaaagcc ataagggcga ttaaaagata atgaaaaaaa
    16441 cttgtattga taccacgaac ttttgcaaat tccgcatcaa agcttaatgc ttcaaattgt
    16501 ctataaaata aaaagatcaa aagtaccacc acgctatcaa ccaaagccat aagccataaa
    16561 tcttgtgttc ctacagccaa aatgctccca aaaagataag ccattaaatc tgtgttataa
    16621 ctagggctta aatcgattaa aataatccca acagccattc caaaagccca gattacagcg
    16681 ataatactat cacttctgtg ttcatagtgt ttagctaaaa aagctactaa aaaagccaaa
    16741 aataaagtaa atattcccgt gcttaataaa ataggcaaag agaaataaaa agctatgcct
    16801 ataccaccaa aagccccatg tgttatacct ccagccatag aaaaaagacg atttatcatc
    16861 accaaagtac ctatgatccc acaagctata ctgactaaaa tcgctcctag taaagcgttt
    16921 tgaaaaaagg tgaaatttaa aatttcaagc attattttcc tttgaaaatt ttaaacaaaa
    16981 attttctttt ttaaattctg tttttttcaa atttcttctt gtaaattctt gttcgcatag
    17041 ttttttacta tcgcaatttt cttcatcgca aaaacaagta tttaaactca tttctacatc
    17101 acaaaaatga gagtggtttt cgtataagtg ttttaaaaat gaactttttt ctttttcttt
    17161 agtattggta tgcaagaaaa gttctttgtt taaatgtgca attttatcgc tataagctaa
    17221 tacaaggttg atatcgtgac aaatgagtaa aattcccata cctttttggt gcaaggagct
    17281 tagaagttca aaaatttgta tagcagactt gttatcaacg cttgcggtag gttcatctaa
    17341 aataagcatc ttacattcac tagctaaggc tcttgcgata aaaacacgtt gtctttgtcc
    17401 tccgcttaga gaatcaatgg ttttgttcca aaatttttcc attcctacgc tttttaaagc
    17461 ttgcatagct ttttctttat cttttttccc ataaaaacca aaaatttttt tacttacaag
    17521 tcccataaga acgatttcaa gtactcttgg acaaaaatta ggattggcta gagtgtgttg
    17581 aggaacatag cctatttctt ttctttgaag agctttgaaa tggatttcat ttttggattt
    17641 taaaagccct aagataagtt ttacaagtgt tgattttcct gcaccatttg gacctatgat
    17701 agagagaaag tctttattgt catagctaag attgatgttt tttaagatga tttcattatc
    17761 ataagtgtag tttagattag aaatttcaaa aaaaagcatg aaaaagcctg attataaatt
    17821 atgagaaaag gcatcagcag tttttaaaag ctcattttcc caatcataag ataaatgatc
    17881 tattttgtaa atttttgcat cacattcttt agcaagtgtt tttgctgcat tttcagggaa
    17941 accattttga acaaaaatga cttttaaatt tttatctttc attagagtga taagtttttg
    18001 caaatctttg ctttttggtt ccttgcctaa aatttctaca ggaatttgcg taagattata
    18061 gcgttttgca aaatatgtcc aagaaggatg ataaactaca aaatctctat tttttaattt
    18121 ttctaatttt gaggcaattt gtaaatttaa act
//
LOCUS       DARBAC010000027        17679 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.027, whole genome shotgun sequence.
ACCESSION   DARBAC010000027 DARBAC010000000
VERSION     DARBAC010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17679
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.027"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..260)
                     /locus_tag="SB799_000667"
     CDS             complement(<1..260)
                     /locus_tag="SB799_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867920.1"
                     /translation="MIRNFFIGMSFLGILFLAFYALYDKKKESVFSLNTCQPLTCDLN
                     LQDCVFSFNKKNIEVSAYPKPIKIFNKTTIKIKNFPHYSNLK"
     gene            417..1394
                     /locus_tag="SB799_000668"
     CDS             417..1394
                     /locus_tag="SB799_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEG0867921.1"
                     /translation="MLKRLALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQK
                     DFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMG
                     DKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADL
                     FTWKLAWTNSDTNTYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNLENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMKILAEQ"
     gene            1395..2381
                     /locus_tag="SB799_000669"
     CDS             1395..2381
                     /locus_tag="SB799_000669"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEG0867922.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKY
                     KQDIKIHLKIDTGMHRNGICVENLEHAIDLIRSSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKV
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            2384..2851
                     /locus_tag="SB799_000670"
     CDS             2384..2851
                     /locus_tag="SB799_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEG0867923.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIIKPTVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENMIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFSNFVS"
     gene            2955..4421
                     /locus_tag="SB799_000671"
     CDS             2955..4421
                     /locus_tag="SB799_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEG0867924.1"
                     /translation="MNLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHTKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVVHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGESKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNTQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(4449..5177)
                     /locus_tag="SB799_000672"
     CDS             complement(4449..5177)
                     /locus_tag="SB799_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0867925.1"
                     /translation="MIEVKNLQKKYGELEVLKDINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(5170..5913)
                     /locus_tag="SB799_000673"
     CDS             complement(5170..5913)
                     /locus_tag="SB799_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0867926.1"
                     /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGIVSYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILHFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
     gene            5996..6175
                     /locus_tag="SB799_000674"
     CDS             5996..6175
                     /locus_tag="SB799_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867927.1"
                     /translation="MLEFPKNKVVFMEILDFILIVIFVFLMIVLVIGFNHQMMQKNKE
                     REERFKKYKKGEQNE"
     gene            6168..6737
                     /locus_tag="SB799_000675"
     CDS             6168..6737
                     /locus_tag="SB799_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEG0867928.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAKELNPDLEVVIASLNS
                     ELLVKGANSISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLIK"
     gene            complement(6767..7132)
                     /locus_tag="SB799_000676"
     CDS             complement(6767..7132)
                     /locus_tag="SB799_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEG0867929.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKHFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            7255..8247
                     /gene="pheS"
                     /locus_tag="SB799_000677"
     CDS             7255..8247
                     /gene="pheS"
                     /locus_tag="SB799_000677"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEG0867930.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDG
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            8244..10565
                     /locus_tag="SB799_000678"
     CDS             8244..10565
                     /locus_tag="SB799_000678"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEG0867931.1"
                     /translation="MIITRSWLNDWLELEEISSDKIAKTLNSIGIEVDRVSALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMPNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKTNEGIMLLDESIGKLELGRALNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLATALNLNLKEPKPFKEGENVLGIGRILRLAAEKELNG
                     LYNYRAIELKGQFQINLLLSLRLAQIESLGKNSIENLLSYATHSTGVLFNAYDLNSLS
                     GEDEEFTINLTKQAHGETKVSCKDKFLSFSGIFQNDESKCKNDSKIVIIEANYTDPLV
                     IANAKMYHKDQDEKTLYRSFRGSEPKLNLGMDFLLSIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            10562..11848
                     /gene="aroA"
                     /locus_tag="SB799_000679"
     CDS             10562..11848
                     /gene="aroA"
                     /locus_tag="SB799_000679"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEG0867932.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQNLKAFNYKS
                     EISSAQVKTAMILSAFRANNVCAFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEISP
                     LKKPLKAQNIIIPNDPSSAFYFALAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            11838..12671
                     /locus_tag="SB799_000680"
     CDS             11838..12671
                     /locus_tag="SB799_000680"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEG0867933.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIENFKI
                     N"
     gene            12803..14473
                     /locus_tag="SB799_000681"
     CDS             12803..14473
                     /locus_tag="SB799_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEG0867934.1"
                     /translation="MSEVNKKVQGGVDDYLEEEDFGQLLEAFDKSREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQDDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALR
                     KEKVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNVAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSTKELSSSPV
                     QEYAKIHKVGDIVKGAIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRMKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            14473..14961
                     /locus_tag="SB799_000682"
     CDS             14473..14961
                     /locus_tag="SB799_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867935.1"
                     /translation="MKKYITISILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            14958..16541
                     /locus_tag="SB799_000683"
     CDS             14958..16541
                     /locus_tag="SB799_000683"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEG0867936.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKVPKDELMQMLSD
                     VEVAITRSSTDVDINFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINHVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMIIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            16528..17190
                     /locus_tag="SB799_000684"
     CDS             16528..17190
                     /locus_tag="SB799_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0867937.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLVDFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLANYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGVGYK
                     LC"
     gene            17184..>17679
                     /locus_tag="SB799_000685"
     CDS             17184..>17679
                     /locus_tag="SB799_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEG0867938.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKSFIYKGYKYIIIVYPRFLDLELFWTKIAIGFGVCLLFVFILMLLLGRRI
                     EKNFN"
BASE COUNT         6385 a         2130 c         3105 g         6059 t
ORIGIN      
        1 atctttaaat tagaataatg aggaaaattt ttaattttta tagtagtttt attgaaaatt
       61 tttataggtt ttgggtaggc tgaaacttca atattttttt tattaaaaga aaaaacacaa
      121 tcttgtaaat ttaagtcaca agttagaggt tggcatgtat ttaagctaaa tacactttct
      181 ttctttttat catataatgc ataaaaagct aaaaacaaaa tgcctaaaaa agacattcct
      241 ataaaaaaat ttcttatcat tatagacaac cttttaaaac aagcctttat gatttataaa
      301 aattatatca taaataaggc cgcattgtta atataattaa tattttttaa gaaaaaaaat
      361 attataatca caaacatttt tgacttaaaa aattttgaaa tacctaagga aaaacattgt
      421 taaaacgact tgctttatta attacacttt cttcattgat gttacatgcc tcagatcttg
      481 ttaaaattta tcttaatcaa gggttagatg ctgttggtgt agcgattgaa aaagaattaa
      541 ctcaaaagga tttttggtta agtgaaatag gagataaaaa tatttcactt ggatattatg
      601 atgataatgt tgctatcgtg cttacaaata aaacagataa aattctccgt gtttattctt
      661 atgaggacgg aaaaataaga aaagattttg aacaaaaaga aataataact ggattaatgg
      721 gcgataaaaa aatagaagga gatttgaaaa cgccagtagg tttttatgag ttaggccgta
      781 agtttaatcc aggtgatcct tattatggtc cctttgcttt tgccacaact tatccaaatt
      841 tacttgataa agtacaagga aaaacaggtg gtggtatttg gatccatggc tatcctttag
      901 atggttctag acttgatgaa tttaaaacaa gagggtgtat tgctttattt aataataatt
      961 tagagaaatt tgcacaagtt gtacaagata aaaaagtttt tgttatgaca gaagaaaaag
     1021 aaaaaattag agctaaaaag gatcaaatag ctagtttatt ggctgatctt tttacatgga
     1081 aactagcttg gacaaatagt gacactaata cctatttaag tttttatgat gagcaagaat
     1141 ttaaacgttt tgataaaatg aaatttgaac agtttgcttc catgaaaaaa tctatttttt
     1201 ctcgtaaaga agataaaaag attaaatttt cagatattaa tatcagccct tatccgaatt
     1261 tagaaaatga aactatgtat agaatttcat tttatgagga ttattacact aaaaactatc
     1321 agtttagagg cgataaaatt ttatacgtta agatagatag taaaggtaaa atgaaaattt
     1381 tagcagagca ataaatgtct ttaataaaaa ttgatcaaaa agcttatgaa tataatttaa
     1441 gacatattgc taaaaaaata gggagttttc aaagattaat ttgcgttttt aaagataatg
     1501 catatggaca tggagctaag cttttagctc cattagccaa aaatttagga gtttcttttg
     1561 ttgctgttaa gagtgaagaa gaagctcaag aaatcgaaga attttttgag aatatattaa
     1621 tactatcaca tcgtcctcat ggtaatgaaa attctcgatt tatttatgct ttaaatgata
     1681 tttcccaagt aaaaaaatac aagcaagata taaaaataca tctaaaaata gatacaggca
     1741 tgcatcgcaa tggaatttgt gtagaaaatt tagaacatgc tatagatctt attcgaagta
     1801 gtgatttaaa acttactgga atgtttacac attttgctag tgcagatgaa atggatggaa
     1861 gtttttttgt tcaaaaagaa aattttcaaa aagctaaaaa gatagtaaaa aaatattttt
     1921 caaatttatt atttcattcg cataattctg cagcattatt tagagggaaa attcccgaag
     1981 atgaatattg tagagttggg cttgttcaat ttggatatgg ggattcaaat ttaaaaagag
     2041 ttttaagctt gtatgctcat agattaagtc aaaggatttt gcaaaaagga cagagtatag
     2101 gatatggagg catttttact gctgcaaagg atatggaagt agcaacttat gatttgggtt
     2161 atgctgatgg tcttttccgt tacaatggaa aaggggagtt ggtgcttgga aatggaaaag
     2221 taatgcttgg aaagatgtca atggatagtt tttcttgtga aaattctggt gaggaaattt
     2281 gcgtgtttaa agatgctgat atttgggctg atttttttca tactattaac tatgaaattt
     2341 tagtaaaatt aaatcctaac attcaaagag ttctggtata aatatgttta atatagtttt
     2401 agttcaccct agaataccgc aaaatacagg tagtataggt agaatgtgtt ttaatgctgg
     2461 ttttaaactt catatcatta aaccaactgt ttttgatatt tctcaaaagg ctgttagaag
     2521 ggcagggctt gattactggg ataaattaga acccattatt tgggagaatc ttgaagaatt
     2581 tttgaatgaa aatatgattt ataaaaatcg cttttttttc gcaacaacca agagtcaaaa
     2641 agcttatttt gatgcagaat ttcagaaaaa tgatttctta ttctttggaa gtgagagtta
     2701 tggcttacct atggaattaa tgcaattaaa ttgggaaaat gctataacta tacctatgaa
     2761 atcttatgga agaagtttaa atttagctac aagcgttggt ataatctctt atgaagcttt
     2821 aagacaaaat tttagcaatt ttgtttctta aaagtttcaa atttacacaa caacttaaaa
     2881 caaataaaat cataaagtcc tttttataaa aattatgtta aagtaaaatt tagattattt
     2941 tttgaggagt ttggatgaat ttagatatta tgctagattt tgccaataaa gcgtctgata
     3001 ttatagctaa taagattgtc ccaaatacag acattattat ggtggttttg cttattgttt
     3061 gtggacttta ttatagcttt ttaactcgct ttgttcagtt tcgtatgttg agttctgtat
     3121 ttaaaattct tacagaaaaa aatgaaggac acactaaaga acatatttca ccttttcagg
     3181 cattgatgat ctcaactgct tctagagttg gtataggaaa tatcgctgga atttctttgg
     3241 cattggctac aggtggcgct ggtgctttat tttggatgtg ggttatggca ttttttggtg
     3301 gtgcctcagc atttgctgaa agtaccttag ctcaagttta taaatcaaaa gatgatacag
     3361 gtgggtttaa aggtggtcca gcttattata taaaaaaagc cttaggctca catttttttg
     3421 gagctttttt tgcttttatt cttattatta cttatgctta tggatttaac ggacttcaaa
     3481 gtcaaacaat gacttcatct tttaaagttt attatgatat gtttaatcca aatgctgctg
     3541 tagattttgc atcaagttct tggccaatga tcattggtat tgttttaact atttttggcg
     3601 catggatgtt tttttctcac catactaaaa taggtaaaat tagttcttta attgttcctt
     3661 ttatggcttt agcttatgtt ttgcttgctg tgattgctgt tttaatgaat tttgataaaa
     3721 ttccttctgt ggttcatatg attttacaaa gtgcttttga ttttaaagct atttttggtg
     3781 gttttgctgg ttctgcttta gttataggga ttaaaagagg acttttttca aatgaagcgg
     3841 gtatgggctc agcacctaat gcagctgcag cagctttgac aagtcatcca gctaaacaag
     3901 gtgttataca agccttttca gttttaattg atgttgttgt ttgtacaagt tctggatttt
     3961 tagttctttt ttctatggca tatttgggac ttggagaaag taaaattgat ggtggaatgc
     4021 ctttagttca agaagctatg cgtgagtatt acggtagctt tggaatccat tttattacta
     4081 tagctattgt tctttttgca ataacttctt taataggaaa ttattattat gctcaagcta
     4141 atgttaaata tttaacaaat tccaaatttg taatgaattt gtttagaatt acagctgtgg
     4201 ctatgatttt tataggctcg caaatgaatt taaaacttgc ttggaatttg gctgatttga
     4261 ctatggcttt catggcaacg acaaatatta tatctttatt gcttttaggt ggtatagtaa
     4321 ataaagtttt aaaagatttt aatacgcaac aaaaatctgg tatagatcct aaatttaatg
     4381 ctagcaaact tggaattaaa aacgctgaat gttgggatta aaattcataa gccttagtgg
     4441 cttatgaatt aatgatttaa aaccttgttt aaaaattctc tcaatctttc attgctagga
     4501 ttttcaaata cttctttagg gcttgcatca acagcaattt ttcctttatc cataaaaaat
     4561 atacgattgg caacatttct agcaaagccc atttcatgag ttactacaag catagttaaa
     4621 ccttcttttg caacatcttt cataatgctt agaacctcgc ctatcatttc aggatctaga
     4681 gctgaagtag gttcatcaaa taaaataaca tcaggattca tcatcaagct tctagcaata
     4741 gctatgcgtt gtttttgtcc gccagagagc ttatggggca ttatattttc tttgtctgct
     4801 aaacccacct tagcaagaag taattttgct ttttttatgg cttcttcttg acttaaaatt
     4861 cctgttttaa tgggcgttaa acataaattt tccataacat ttttattagc aaaaagatta
     4921 aaatgctgaa ataccatgct aactttttgc ctgatcttat taatatcaat ttctttatca
     4981 agtatgtttt gcttattgat taaaatttcc ccactatcag ctagttctaa gcgattgata
     5041 cagcgtaaaa atgtactttt tccgcctcca cttggaccta tgatagctat tacatcgcct
     5101 tttgagattg tagtgttaat atcttttaaa acttctaatt ctccatattt tttttgtaaa
     5161 tttttaactt caatcatttt tattcatcct aagttcaagt ttttttgcaa aatagctaaa
     5221 aatttttacg cttacataat aaacaagtcc agtgaaaata ataggttttg gattgtaaag
     5281 tacggcttgc aggctttgac tttgcatggt aatatcaata acactaataa atcctacaac
     5341 agaagtttcc ttaaataaag aaataaattc attagctaat gcaggtagaa tgtttttagt
     5401 agcctgtgga agaataattt ctttcattga agttttgtaa tcaagtccca ttgctcttgc
     5461 agcttccatt tgtcccttat ctacactatt aatgccactt cttacaattt ctgctatata
     5521 agccgagcta ttaagtccta gtgcaagaat ggctgcataa aggttatcta taaaagtaaa
     5581 aattacaaaa gcaaaaatca tcaattgtaa aattactggt gttcctcgta taatgtctat
     5641 atattcatct ataataaaat taagcgtttt aaatttagag aagtgtaaaa tagctaaact
     5701 aaaaccaata atcactccga taataacagc acaagcagtt aataaaagtg taataagata
     5761 actttttaaa taagcttttg cattttctgt atagccatag cttacaattc cactaggatc
     5821 ttgaattttt aatatttcta ttgggaaaga aaaatagccc cataaaataa taataacaaa
     5881 aaaaacaaaa attcttatat ttttctgatt caatttgtaa accttttcag agaaattatt
     5941 taaaaaaaga ttttatagaa atatctttga attttctcta aagatttaaa aaaatgtgtt
     6001 agaatttccc aaaaataagg ttgtatttat ggaaatttta gatttcattc taatagttat
     6061 ttttgtgttt ttaatgattg ttttggtcat aggtttcaat catcaaatga tgcaaaaaaa
     6121 caaagaaaga gaagaaagat ttaaaaaata taaaaaagga gaacaaaatg agtaaaaaag
     6181 tattaattcc attggctcaa ggttttgaag aagctgaatt tataggaatt gcggatgttt
     6241 taaaacgagc aaaagaatta aatccagatt tggaagttgt tatagcttcg ttaaacagtg
     6301 agttattggt aaaaggtgct aatagcatta gtataaaagc agattgttct atagaggatg
     6361 ttgatataga aaatttagat gctattgctt tggcgggtgg ctttgaaggt atgatgaatc
     6421 ttaagaattc aaatgttatt ttaaatatca ttaaacaact tcacagcaaa aataaaattg
     6481 ttgccgcaat ctgtgcttct cctatagtct taaatgaagc aggtgtttta gagggcgagt
     6541 ttgcttgcta tcctagttgt gaagttggac ttaatggaaa tcgtgttaac aaggctgtag
     6601 ttgtaaataa aaatgttata acttcagcag gtccagctac ggcaattctt tttggtttag
     6661 aactagctaa aaagttatgc ggtgatgaaa tttatcaaaa attatacgag ggaatgttgc
     6721 tacctctgat aaaataattt aaatggtagt ttttctacca tttaaattaa aataaagctt
     6781 gaggattttc tttttttgtt ttttccttag gcagttcaaa acctccaagc atatgaaaat
     6841 gcaaatgaaa aacttcttgt ccgctatttt ttccacagtt tgttactaag cgatatccac
     6901 ttttatctac gcctaaaaga acagctaatt cttgtataaa acttgtcatt ttggccataa
     6961 gttcaggatc aaattcttga aagtctttaa aatgtttttt agggattata agtatatgta
     7021 taggtgcttt gggtgcaata tcatgaaatg ctagaaaatc gtcactttca agcactttat
     7081 tgcatggaag tttaccttca actatgagtt caaaaattgt tttttcttgc attatttatc
     7141 cttttttatt gttggtttga tacaattata tctttaaagt ttggttttta tgctgaattt
     7201 aaaatagttt ttaatagaat tagaacttga aatattttat ttaaggtaag aaaattgcaa
     7261 aattttatag aacagattca aaaatgtgag aatttaaatg atttggaagc cattaggatt
     7321 tccgttctcg gaaaaaaagg tattttaaca gaaggcttta caaagcttaa agagttagaa
     7381 gatggtgcaa aaaaagaatt tgctgctaaa ctaaatgcac aaaaagaaat atttaatgag
     7441 gcttatttag ccaaatttaa agatttggaa aatcttgctt tagaagaaag aatgaaacaa
     7501 gatgctttaa attttaacta ttttgatgaa agtattacaa caggtgcctt gcatcctgtt
     7561 atgagtacca tggataaaat catagagtat tttatagctt tgaattttag catagaaaaa
     7621 gggcctttaa tagaagatga cttccataat tttgaagcgt taaatttacc taaatctcac
     7681 cctgcaagag atatgcaaga taccttttat tttgatgata aaaggctttt aagaacacaa
     7741 acttcaccag tgcaaatacg gacaatgctt gcacaaaaac ctcctattag gatgatagcc
     7801 cctggtgctg tatttagaag ggattttgat attacgcata ctcctatgtt tcatcaagtt
     7861 gaaggccttg ttgtggaaga ggggcaaaag gttagctttg caaatttaaa aagtgtattg
     7921 gaagattttt tgcgctatat gtttggagat gtgaaagttc gttttcgtcc aagttttttc
     7981 ccatttacag aaccttctgc tgaagttgat atttcttgtg tattttgcaa aggaaagggt
     8041 tgtagggttt gtaaacatac aggttggctt gaagttttag gatgtggaat agttgatcct
     8101 aatgtttata attttgttgg ctatgaaaat gtaagtggtt atgcttttgg attgggagta
     8161 gagcgttttg caatgctttt acatcaaatt ccagatttaa gatctttatt tgaaggtgat
     8221 ttgagattat tggagcagtt tagatgataa ttactagaag ttggttgaat gattggttgg
     8281 aactcgaaga aataagttca gataaaatag ctaaaacttt aaactccata ggcatagaag
     8341 ttgatagggt tagtgcttta aaggctccag ataaagttgt tgtaggctat gttaaggaaa
     8401 aaattaaaca tgaaaattca gataaattaa gcatttgtca agttgatatc ggaagtgaaa
     8461 ccttgcaaat tgtctgcggt gctgcgaatg ttgatgcagg acaatttgta gctgttgcaa
     8521 ctaaaggcgc tatcatgcca aatggtatgg aaataaaaga agcaaaatta cgaggagtgg
     8581 attcttgtgg tatgctttgt tctagtttag aacttggttt tgaaaaaacc aatgaaggga
     8641 ttatgctttt agatgagagt atagggaaat tagaacttgg gagagcttta aatacttatg
     8701 aaatttttaa cgatgagcta atagaagtag aacttactcc taataggggt gattgtttaa
     8761 gtatttatgg tattgctcgt gatttagcta cagctttaaa tttaaattta aaagaaccaa
     8821 aaccatttaa agaaggtgaa aatgttttag gtattggtag aatcttgcgt ttagcggctg
     8881 agaaggagct taatgggctt tataattatc gcgccataga actaaaaggt caatttcaaa
     8941 taaatttatt gcttagttta agacttgcgc aaattgagag tttgggaaaa aattctatag
     9001 aaaatttatt aagttatgca acacattcaa ctggtgttct ttttaatgct tatgatttaa
     9061 atagtctttc tggggaagat gaagaattta ccattaattt aactaagcaa gcacatggag
     9121 aaacaaaagt atcttgtaaa gataagtttt tgagttttag tggaattttt caaaatgatg
     9181 aaagcaaatg taaaaatgat tctaaaatag ttattattga ggctaattat actgatccat
     9241 tagtaattgc aaatgctaaa atgtatcata aagatcagga tgaaaaaaca ctttatagaa
     9301 gctttagggg aagtgaacct aaattaaatt taggaatgga ttttttgctt agtatttttg
     9361 agcagattcc aaatcttgtt atttatagtt cttctcaaca aattttaacc gacaaagaat
     9421 taccaatcat accaataagc attgaaagta ttggcgatat aatagggcaa aatgttgata
     9481 aagatgaagt attaaaaata ttgaaaaaat taggttttga actcatactt tcaggtgaag
     9541 ggcttataaa tgttaaagca cctttacatc gtcctgatat taaaaattta tcagatattt
     9601 gcgaggaagt tgtaagaatt ataggtattg ataatattgc ttctaagggt ttagaattta
     9661 tagaaaaaaa tcgtttaaat tctgcatata aaaattatat tgagtttttg aatttaagga
     9721 aaagagcagt agctagtggt tattttgaaa gcttacatta tgttttggat aatgaagaag
     9781 aacttaaaag attgggtttt gactctgtta aattaaaact aattaatcca attacagcag
     9841 aacttaatac tttaagaaca acccttttaa atcatttgtt aaatgcagca agtttaaatg
     9901 caaaaaattc taaaaaaatt attaaacttt ttgaactagg ggctgttttc aatgttaata
     9961 atcaagaatt aaatcgtatc gcatttatcc attctggctt aaaagaagaa gctaaaattt
    10021 ccaacaaggc caaacctgaa tcggtgcaat tttatgattt tcttttagac attaaaaata
    10081 ttataggtga ttttaaacta aaatcatcaa aatataatat tttaagccct tatgaacaag
    10141 cagatattta cctatcggat attaaagtag gttttatagg ccgtttgcat ttaaaaatag
    10201 aaaatgagag agatttacca aaaacatata tttgcgaact tgatttagat ttaatcaggc
    10261 aagattttaa aatagctaag ccttactcca aattcccagc tatcactaga gatcttagcg
    10321 tgttaatacc taaaggtttt gaatacaatc agattaaaaa ttgtatcgaa gaattgaatt
    10381 tagaaatact tgaaaatttt cgtttagttg atatttatag tgatgaaaac cttaaagaat
    10441 tttatagcat tactataagt ttttctttta gggatataaa taaaactcta gaggataatc
    10501 aagtcaatga atgtatggat aaaattttaa atactcttaa aaatttgggt cttgatttaa
    10561 gatgaaaatt tacaaattgc aaacccctgt aaatgctata cttgaaaata tagcagcaga
    10621 taaaagcata tctcatcgtt ttgctatatt ttcgctttta acacaagaag aaaataaggc
    10681 tcaaaattat ctcttagctc aagatacttt aaacactctt gaaattataa aaaatcttgg
    10741 agctaaaatt gaacaaaaag attcttgcgt caaaattata ccccctaaag aaattttatc
    10801 tccaaattgt attttagact gtggaaattc aggaactgct atgcgtttga tgataggatt
    10861 tttagcagga atttctggtt tttttgtttt aagtggagat aagtatttaa acaatcgtcc
    10921 tatgagaaga ataagcaaac cacttactca aataggcgct agaatttatg gaagaaatga
    10981 ggcaaattta gctccacttt gtatagaagg tcaaaattta aaagctttta actataaaag
    11041 cgaaatttct tcggctcaag ttaaaacagc tatgatttta tctgctttta gagctaataa
    11101 tgtatgcgct tttagtgaaa tttctcttag tcgaaatcat agcgaaaaca tgttaaaggc
    11161 tatgaaagct ccaataaggg ttagcaatga tggcttaagt cttgaaataa gtcctttaaa
    11221 aaaaccttta aaagctcaaa atataatcat tcctaatgac ccttcttcgg ctttttattt
    11281 tgctttagca gctattattt tgcctaaatc tcaaattatt ttaaaaaata ttttacttaa
    11341 tcctactcgt atagaggcgt ataaaatttt gcaaaaaatg ggtgccaaac ttgaaatgac
    11401 aataactcaa aatgattttg aaactattgg tgagatcagg gtggagtcta gcaagcttaa
    11461 tggcatagaa gttaaagata atattgcttg gttgatagat gaagcgcctg ctttggctat
    11521 agcttttgct ttggctaagg gtaaatctag tttaataaat gctaaagaat tacgcgttaa
    11581 agaaagcgat aggattgctg tgatggttga aaatctaaag ctttgtggtg ttgaagctag
    11641 agaacttgat gatggttttg aaatagaagg tggatgcgaa ctaaaatctt caaaaattaa
    11701 aagctatgga gatcaccgta ttgctatgag ttttgctatt ttaggtttgc tttgtggaat
    11761 tgagattgat gatagtgatt gtataaaaac ttcttttcca aattttatag agattttatc
    11821 aaatttagga gctaggattg attattgaat tagcaaaaaa ctatggtttt tgttttggtg
    11881 ttaaaagagc tattaaaaaa gcagaacaaa taaaagatgc tgcaactata ggccctctta
    11941 ttcataataa cgaagaaatt tctcgtttac aaaaaaattt taatgtcaaa actttggaaa
    12001 atatacaagc tttaagcaat gaaaaaaagg ctattataag aactcatggt attacaaagc
    12061 aagatttaga agaattgaga aaaaaagata tagaaatttt tgatgccact tgtccttttg
    12121 ttacaaaacc acaacaaatt tgcgagcaaa tgagcaagga gggttatgaa gttgttattt
    12181 ttggagatga aaatcatccc gaagttaaag gagtaaaaag ttatgtaagt acaaaagctt
    12241 atgtggtttt ggataaaaaa gaacttcaaa atataaaact tcctaataaa atagctgtgg
    12301 taagccaaac aactaagaag cctgagcatt ttatggagat agtaaatttt ttaatactta
    12361 aaaccaaaga agtaagggtt tttaatacta tatgtgacgc aacctttaaa aatcaagatg
    12421 ccattaaaga actctcgctt aaaagtgatg ttatggttgt tgtagggggt aaaaactcag
    12481 ccaatacaaa acaacttttt ttgattgcaa aaaccaattg tgaagatagc tatctaattg
    12541 aaaccgaaga agagttaaaa aaagaatggt ttttggataa aaaacattgt ggcattagtg
    12601 caggtgctag tactcctgat tggatcatac aaaaagttat cgccaaaata gaaaatttta
    12661 agattaatta aaaaatgttt tcaaatagaa taaaaaagtc aaaaatttaa aaaaaattaa
    12721 caaaaataaa aaaacttaac actaattaaa gaaaaataag gtaaaatcaa tcaatttcta
    12781 aaaattattt taaaggacca taatgagcga ggtgaacaaa aaagttcaag gcggcgtaga
    12841 tgattatctt gaggaagaag attttggaca gcttttggag gctttcgata aatcaagaga
    12901 agaggctaca acagagggtg tgattgtaga gatcaaaaat gatgaagttt atgtagatat
    12961 aggtaaaaaa tctgaaggta ttttagctct tagcgaaata caagatgata attctaagct
    13021 attatttaat gtaggcgata gtattaaagt tgctgttatg ggttctcgtg gtggcagatc
    13081 tttactttct cataaaaaag ctttgagaaa agaaaaagtt attgaattta ttaaaaacta
    13141 tcaagaaaat caagatgata tttttaccgt aaaagtagtt ggaaaaaata aaggcggatt
    13201 gatagttgtt gatgaaaatg atgttgaatt tttcttacca aaatctcaat atggctttaa
    13261 agaaacaaat aatattatag gtaaaacatt taaagttaaa attattaaaa tcgacaaaga
    13321 tgagcaaagt attattgttt ctcgtaaaaa aactttagat gacgagagaa gaaaacgcaa
    13381 agaattgatc aataatgtag cacaacaaga agatttaatt gaaggtattg tgaaaaaaat
    13441 tactacttat ggtatgtttg tggatgtagg aggtgttgat ggtcttgttc attacagcga
    13501 aatttcttac aaaggacctg taaatcctgg aacactttat aaagagggtg ataaggttcc
    13561 agttaaagtt ataaagtatg ataaagaacg caaacattta tccttgtcta taaaagcggc
    13621 tttacctgat ccatggagcg agataaaaga tactcttgat gtaggtgata ccattaaagt
    13681 aatagtatca aatatagagc cttatggtgc ttttgtggat ttaggaaatg atatagaagg
    13741 atttttacat atcagtgaaa tttcttggga taaaaacatt aaaaatccaa aagattatat
    13801 caacaaaggt caagaaattg atgttgaagt aattgaaatc aatccaaatg aaagacgctt
    13861 aagagtttct ttaagaaatt tactttctag accttttgat gaatttatga aatcttataa
    13921 aattgcagat gtggttgaag gagaaatcac ctcagtaact tcttttggtg catttgttaa
    13981 acttggtggt attgaaggtt tattacataa tgaagatgct tcttgggata gaaacgataa
    14041 atgcaaagac aaattctctc aaggggataa aatcaaggta aaaattatca aaatagatga
    14101 agaaaaccaa aaaatatcat taagtacaaa agaattaagc agttctccag tgcaagaata
    14161 tgctaaaatt cataaagtcg gcgatattgt aaaaggcgct atccgcgata ttaaagattt
    14221 tggtgttttt gtagaactaa gtaaaaatgt tgatgcttta attcataaag aagatataag
    14281 cacttctatg cttgaaaatt taaaaattgg cgacgatatt gaagctgcta tagtttttat
    14341 tgatgaaaag aaaaatagaa ttcgcctaag tgttaaaaat cttgttagaa tgaaagaaag
    14401 agaagttctt aatgaaatca ataatgatga taaagtgact ttaggtgata tcattaaaga
    14461 tcagctagct taatgaaaaa atacattaca ataagcattt tgagtatttt attactcatt
    14521 ttgcttgctg ttgtttttac attgctttgg caatttaaag ctaatgtaaa tttcattcca
    14581 caatttgcta aagatacaaa tacacagcca agcattcaaa cccaaaatca agatctttca
    14641 tggcaagaag aattagcaaa atggcctaca agagatttta ccccagcagc agaaaaattt
    14701 accttatatt ttgatgcgga tactagcgag cttaaggaga aaaataaata ttatcaactt
    14761 atagttggaa aatatgatat ttattctatg ttttgcttaa gacagacttt aaattctttt
    14821 aatgtgaagt attttcttct taaatcaggt gatagtccag aaatcttttt ggatacaggt
    14881 aatgaaaaac ttatagatga tattatcaaa gaattaaaaa aatataaaat aaatacagaa
    14941 gtaaaggaaa tttggttatg aaaaaaaaga ttatagtatg tgatgctatt ttggataaag
    15001 gtgtcgatat tctaagaaaa gctgaagata ttgagcttat agaagctgca aaagttccaa
    15061 aagatgaact tatgcaaatg ctaagcgatg ttgaagttgc tattactaga agttctacag
    15121 atgtagatat aaatttctta aatcatgcca aaaaattaaa agcgcttgtg cgtgctgggg
    15181 tgggcgtaga taatgttgat attccagagt gttctaaaag aggagtgatt gtgatgaatg
    15241 tcccaactgc aaatactatt gccgcagttg aactaacaat ggcacatctt ttaacatcag
    15301 ctagaagctt tgtcaatgct cataattttt taaaaattga aagaaaatgg gaaagagaaa
    15361 aatggtatgg cattgaattg atgaacaaaa ccctaggggt tataggtttt ggaaatatag
    15421 gttcaagagt agctatccgc gctaaagcat ttggtatgaa aattttagcc tatgatccgt
    15481 atatttctgc ttctaagatt acagatttag atatggagca agcaaaaaat ttggatgaaa
    15541 ttttagaaaa aagtgatttt attaccattc acacaccaaa aaccaaagaa accaatggta
    15601 tgataggaaa gcaagaaatt gcaaaaatga aagatggaat aagattaata aattgtgctc
    15661 gcggaggatt gtacacagaa gaggctttat atgaaggttt aaaaagtggt aaaatagcat
    15721 ggcttggtat agatgtgttc gataaagaac ccgcgactaa tcatcctctt ttagactttg
    15781 aaaatatttc ggttacttct cacctaggag caaatacttt agaaagtcaa gataatatcg
    15841 caagagaagc ttgtgagcaa gcattaagtg cagcacgagg cgtggcttat cctaatgcct
    15901 taaatttacc aattaaaact gaagacttac caccttttgt agctccttat atagaacttg
    15961 tttctaaaat ggctttttta gctgttcaaa ttgataaaaa tccgataaaa agtattaaat
    16021 tagaggctga aggaattatt ggcgagtatg caaattctat gctaaccttt gcagctgttg
    16081 gtgctttggg tggaatttta ggagagaaaa ttaatcatgt taatgcagaa tttgtagcca
    16141 aagaaaaagg agttgaatta tcttgcgaaa ctcttccaaa tagtggttat aataataaac
    16201 ttagtgttaa aattatcacc gaaaattcaa atatcagtgt ttcaggaaca gtgtttaatg
    16261 aaaatgaaca acgcatagtt ggattaaatg gctttaaaac tgattttaag ccaaaaggga
    16321 aaatgattat ttttaaaaac aaagacatac caggagttat agctaaaatc agttccgttt
    16381 tggcagctaa aaatatcaac atagctgatt ttaggcttgg tagagatggt tttgggtatg
    16441 ctttggctgt tgttttgatt gatgaaaaag ttcaaaaaga agtattagat gaactaaaac
    16501 aattagaggc gtgtgtattt gtccaatatg ttgaaattta aaattttaat tatagaagat
    16561 gatatagatt taaacgaact gcttgtttta aagttgaaat ctagtggtta tgaagttata
    16621 tctttagtgg atttttttgg agttgaagat ttgctcgata atgagcaaat cgatctttta
    16681 atagtcgata gaaatttgcc cagtggagat tctttagaaa aaattcaaga tttaagagag
    16741 caaggatata aagaagcagt tatttttctt acagccaagg ctttgcatca agatttgctc
    16801 gaaggctttg aaagtggttg tgatgattat gtttgcaaac cttttgattt caatgagctt
    16861 ttgcttcgca ttaaagcaat tttaaaacgc cataaaaaag aagaagaaaa actatctttt
    16921 ggtgatttta ttttagattt ggctaattat gaattctttt acaaaaatca aaaattagaa
    16981 atctcaaatc ttgactatga gcttttaaaa tgtttttttg aaaatccaaa taccttgctt
    17041 actagacaat ttttaagcga aagtgtttgg aaagatgata ctacaagtga taaaacaatc
    17101 aatatagctc taacaagact tagaaataaa tttccaaaac taaaagatca tattataagt
    17161 gttaggggtg ttggctataa attatgctaa aaactaaaaa tatttttata gttttttttg
    17221 ttgtattggc tttgattttt gggtttattt tttatacttt tactaattct tatcttaatt
    17281 tcttgcttat aaaacaatat gaacaaaaaa tcaaaagtct tgatgatgtt ttaaaatttt
    17341 ctctcttaga gcatttaaat gatgctaata tcaaggattt tgctaaagat actagggctg
    17401 attttattat cttaaacaat gatatgaaaa taagttctgt aaaaaatcct gatttttttt
    17461 ctaatcttaa agaaggagaa attttaaatt tcaattcaaa aaaaattctt actaaaagct
    17521 ttatttacaa aggatataaa tatattatta ttgtttatcc tcgtttttta gatttagaac
    17581 ttttttggac aaaaatagca atcggttttg gagtgtgctt gctgtttgtt tttattttaa
    17641 tgttgttgct aggtagaaga atagagaaaa attttaata
//
LOCUS       DARBAC010000028        17125 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.028, whole genome shotgun sequence.
ACCESSION   DARBAC010000028 DARBAC010000000
VERSION     DARBAC010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17125
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.028"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..674)
                     /gene="peb2"
                     /locus_tag="SB799_000686"
     CDS             complement(<1..674)
                     /gene="peb2"
                     /locus_tag="SB799_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HEG0867939.1"
                     /translation="MKKILILSLVAASFLNAEILVYGPGGPAPVLKELALKFEEKTKE
                     KVIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIV
                     RPNNPKNIKNFEDILKDGVNVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAK
                     NSKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLEN
                     KKALEFV"
     gene            complement(723..2753)
                     /locus_tag="SB799_000687"
     CDS             complement(723..2753)
                     /locus_tag="SB799_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEG0867940.1"
                     /translation="MPLSKLNNEQYLAATADFGRNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKELLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELASETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
     gene            2882..3901
                     /locus_tag="SB799_000688"
     CDS             2882..3901
                     /locus_tag="SB799_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867941.1"
                     /translation="MNLKIFSIIVSILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNSYSPSIQTNNSSSDININNNTIQKQETNLLDENQSLNNDTFNTSISE
                     NNQSLNNDTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERER
                     AVKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRINL
                     LKDMLSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPY
                     LNNPKELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEIIE
                     ISSIK"
     gene            3924..6536
                     /locus_tag="SB799_000689"
     CDS             3924..6536
                     /locus_tag="SB799_000689"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEG0867942.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYTKFVGKEVILPISKKAIKIIADEHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFNEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEH
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSENDLEDFYPNSLLITGFDILFFWVARMMFQSTNALHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNATNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVGIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIMMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            6541..7551
                     /locus_tag="SB799_000690"
     CDS             6541..7551
                     /locus_tag="SB799_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEG0867943.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRVLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            7548..8459
                     /locus_tag="SB799_000691"
     CDS             7548..8459
                     /locus_tag="SB799_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0867944.1"
                     /translation="MNEENISIISAFFSRISQFFNEFSWQDIKEVSLSSITSFSENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGISIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFEK"
     gene            8651..9424
                     /locus_tag="SB799_000692"
     CDS             8651..9424
                     /locus_tag="SB799_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0867945.1"
                     /translation="MKIKSLFIVSILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILV
                     VRVGHENDPKIKALTQALQSDKIKQFIIEKYNGSVLPAF"
     gene            9473..10243
                     /locus_tag="SB799_000693"
     CDS             9473..10243
                     /locus_tag="SB799_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0867946.1"
                     /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     RSEDKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            10253..11029
                     /locus_tag="SB799_000694"
     CDS             10253..11029
                     /locus_tag="SB799_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEG0867947.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTNLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAVITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATIKGEETSQKSLVIKKILTSDKIKNFIIEKYKGSVIPTF"
     gene            11113..11775
                     /gene="flgA"
                     /locus_tag="SB799_000695"
     CDS             11113..11775
                     /gene="flgA"
                     /locus_tag="SB799_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HEG0867948.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERTIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            11772..12335
                     /locus_tag="SB799_000696"
     CDS             11772..12335
                     /locus_tag="SB799_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEG0867949.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKAE
                     NEVNLEEICQENFKYTHFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
                     QMENFIVGKWLDLLEIKHNLYEKWQNF"
     gene            12375..12851
                     /gene="coaD"
                     /locus_tag="SB799_000697"
     CDS             12375..12851
                     /gene="coaD"
                     /locus_tag="SB799_000697"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEG0867950.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            12842..13420
                     /locus_tag="SB799_000698"
     CDS             12842..13420
                     /locus_tag="SB799_000698"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEG0867951.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPISKRAELLLFLADRAQHFEEILKTNQNKLIISDRSFISGMAYAKDFENDL
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISIEILTLDAKESKEKLHQQIKEFLQ"
     gene            13417..14643
                     /locus_tag="SB799_000699"
     CDS             13417..14643
                     /locus_tag="SB799_000699"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEG0867952.1"
                     /translation="MINALKGMKDLLDKDAYYYEKVIKTCEEVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYHGSMFRYERPQKGRLREFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLL
                     INSLGCLKCMPKYRENLIHFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQSLLNDAP
                     LLNQNLCSSCQKDFEILQSVLKENGVDFEVDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKEEKVQREGIYLCAMDEIYIQ
                     KLLHIATNLRKEHKVLLSYEARKLAKHLENADKNNAEIFLCMGENEAQNESLFYKNLV
                     KKEEKMIKISDLKKVL"
     gene            14640..16475
                     /gene="speA"
                     /locus_tag="SB799_000700"
     CDS             14640..16475
                     /gene="speA"
                     /locus_tag="SB799_000700"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEG0867953.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINHEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSI
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDALEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            16476..17114
                     /gene="cysE"
                     /locus_tag="SB799_000701"
     CDS             16476..17114
                     /gene="cysE"
                     /locus_tag="SB799_000701"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEG0867954.1"
                     /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRVFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGAKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDVGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPESQK"
BASE COUNT         6437 a         2511 c         2703 g         5474 t
ORIGIN      
        1 acaaattcta aagctttttt attttctaaa cctttttttg taggagctat ttcagctgca
       61 cgataaatca ctgcattttt atctttgata aataaagctt tatcatcgcc taaagccttt
      121 gcccaatgag accaaatgat taaagcatca atatttggat tgttattcca ctcatctaca
      181 gcagctttgg aatttttagc ataaattttt atatttttac gtaattttac caaattttct
      241 ctttttgcac tttttaaagc catatcttca taaagtccaa cttgtcctgc accatcaacc
      301 accataacat ttacgccatc ttttaaaatg tcttcaaaat ttttaatatt ttttggatta
      361 tttggacgca cgataatacc tgatggacgc acatttaaaa cgcttaaatt ttccaaactt
      421 aaacttggaa tttttttagc aaaatcatcc atcattgaag tattgcctga aaaaatcaaa
      481 tctgcatttt cttttgcttt atctatccaa gctggagttg gacctgcggt tacaatcacc
      541 ttttcttttg ttttttcctc aaattttaaa gcaagctctt ttagcacagg agcaggacca
      601 cctggaccat aaactaaaat ttcagcattt aaaaaacttg ctgctactaa acttaaaatt
      661 aatatttttt tcataaaata aacctttctt taataatata acttacttga aaggaaattt
      721 tatcaatcta tagttaactc tcccttgcaa agccctgctt ctataagaaa acgagaagga
      781 gcaaaagaag tttttttgtt tttatcatat ttagcatagc ttaaataaag tatatttttt
      841 gccctagtta ccgcaacata aaaaagtctt ctttcttctt ctaagcttcc acccattccc
      901 ataagctttt gattaggaaa gcgaccttgt gcaagatcaa tcacaaaaac aagatcaaat
      961 tccaagcctt tactcgcatg cacgctaagc aaattaactc ctttgccgct actcatttcg
     1021 cttgcaccta aagttagaaa attataatac ttgtaaatat cgctataatt ttttgtaagc
     1081 tcttttaaaa cattgaattt tgtttctatt ttttctaaat tttcactctt tcttaataaa
     1141 tccacctgcc ctgctttatt tgtcgctctt ttggttgcaa gttcttcgca aatttctcta
     1201 taaaaagaat tttcacaaat taaattgact aaagtcaaag aatgttttat ttccatagct
     1261 ttttttaaaa aaagatagat tttttccaaa tttctagcgc acaaatcatt gatttttgaa
     1321 agtcttaaaa taggatgtgc atcaaattca ctctcaaatt taaaacgagt ttcgctggct
     1381 aattcttcca aatctgcaaa aagcccaagt tgataatttc ttttttgatg attttgcaaa
     1441 tttacatttt tatcaggatc taaaaaacct tttattaaat ttccatgccc taattttaaa
     1501 agtgcgtcaa aaatttcttt tgctaaaact ccacccacac ctttggtgta ttgaaccaaa
     1561 tgaataaaag ccataatatc cttaggattt accacaagag caagcataga gctaaaagct
     1621 ttaacttcta aactttcaaa aaaacttcca cttccctttc tcacacttgc aatgccctgc
     1681 tcccttaaag ctacttcaac cccatcagca cttgagttgt tgcgaaaaat cacggcaatt
     1741 tcttccaaac ttactccgct tgtaagtatc attttggcta tattttgata ctgatcaaat
     1801 aattcttcaa aagtaagcaa agatggggct ttaaactcat catttcttgt aacaataagt
     1861 tcttttggat ataatctttc gttatttaaa atcactttat tagccaaagc taaaatactt
     1921 cttgatgaac ggtagttttt atttaaagaa aaaatttttg catctttaaa acgatcttta
     1981 aacccaccta tgatattaat atccgctcca ttaaaagcat aaatactttg atcataatcc
     2041 cctacacaaa acaaactttt actatgaaaa gcctctatta aggaactttg caaagtgttt
     2101 gtgtcttgat attcatctac taaaatttca tcaaattcat atttttcttc ttttaaaagc
     2161 tcttttagat tgataagtaa gtcattaaaa tctacataat taaaacgctt tttttcatta
     2221 tcatattctt ttaaaatatc ttcataaatt tcagcataaa tactttgatc ttcgtagttt
     2281 tgacaaaacc aagtataaaa atcttgattg tgtgctttgt tttgaaacaa agaataaaga
     2341 tcatataaat aacttgattg ataaggtttt atatcactta aatgcctaaa agttcttttt
     2401 tcatagacac ttttaagtag agtttttaac tcgcttgctt gctttaaggc tatattttta
     2461 tccgcatttc taagtaaggt ataagccgta ctatgaaaag ttcctgcaag tattttactg
     2521 gtaatatttt tatcaaaaaa tttccctaaa cgccctatca tttctttact agctttattt
     2581 gtgaaagtca aaagcataat tttttgaggt gccactccct tgcttaaaag ataagaaatt
     2641 cttgcaacaa tagtagaagt ttttcccgtc cctgcacttg caataacaag attgcgtcca
     2701 aaatcagcag tagcggcaag atattgttca ttatttaatt ttgaaagtgg cattattttc
     2761 cttataaaag ttaaaattat aaaaaaaaat tacttaaaaa tataaaaatt taaaattact
     2821 ttatattaga ttatagtaca atgctaaaat tatttaactt tctgttttta agggatagca
     2881 aatgaatttg aaaatttttt ctattattgt tagcatatta attgctgtta ttgtgatatt
     2941 aggtggaaca tattattatc tttttgaata ttcaaaacca aagaattaca ccttaaatac
     3001 caacacttac accgaacaaa aatcgtatac caataactac gataattcct attcaccttc
     3061 gatccaaacc aacaatagtt catcagatat aaatattaat aacaatacca tccaaaagca
     3121 agaaacaaac ctattagatg aaaatcaaag cttaaataac gatacattta atacatcaat
     3181 aagcgaaaac aatcaaagct taaataatga caccaataca agtaataata ttaatacaaa
     3241 tgaaaataag caaattttag atacggataa agaaaaatta aaacaagaaa ataaacaagc
     3301 caaaatagaa gctcttaaaa aagaaatcag caaacaacaa aagatcttag aaagagaaag
     3361 agctgtaaaa aaagaacttc aatcaaacaa atcaaacaaa aataaatatc taaataccgc
     3421 tagagaatat ctaagcatag gaaaaaacag tcgtttagaa cctgagctta gcacagaaaa
     3481 tatgaaagtt tacattttag atggaaaatt tttaagccaa tacagaatca atctgttaaa
     3541 agatatgcta agcgttatac aagataatgc aaaagattat tatctaagta tttttgttaa
     3601 aatgctacca aaaggggaaa tgaaattaac tatctataac aaagaaatta tcttttcaga
     3661 tatgaaaaaa gcttataaat atattagttt agatagatta agcccatatt taaacaatcc
     3721 aaaagaatta aatgaacatg tagcacgtga agaaatttta gaaagactta aacttcaaat
     3781 taaaaaagac ggcaaaggaa gtgatttttc taaacatatc aaaagtttga aaactggact
     3841 taatacagca caatatttct tcccgttttg tgaaattata gaaattagct ctattaaata
     3901 agctaaaaca ataaaggcaa ataatgtatg ataaaaattt agaaaaagag tattatcaaa
     3961 tttgcgaaga acgcggatat tttgaaatcg atggcaataa aaccatacaa gaaaaagata
     4021 aaaatttctg cattatgatg cctcctccta atgtcactgg agttttacac ataggacatg
     4081 ctttaacctt cactctacaa gacattatga cgcgttataa aagaatggac ggttataagg
     4141 ttctttatca accaggactt gatcacgcag gtattgccac tcaaaatgtt gtagaaaaac
     4201 aactccttgc tcaaggcatt aaaaaagaag aactaggtag agaaaaattt atagaaaaag
     4261 tatgggagtg gaaagagcaa agcggtggaa aaattttaga ccaaatgaga acactaggca
     4321 tcactcctgc atggagtcgc ttgcgtttta ctatggatga aggtttggtt aatgccgtaa
     4381 aaaaagcctt tgtagaactt tatgataaaa gacttattgt acgcggaaac tatatgatca
     4441 attggtgtac tcacgatggc gctttaagtg atatagaagt tgaatacaaa gaaaacaaag
     4501 gaaaacttta tcatattaaa tactttttaa aagatagcga tgaattttta gtagtagcca
     4561 caacgcgtcc tgaaactttt tttggcgata ctgcagttat ggtacatcct gatgatgaac
     4621 gctatactaa atttgtgggt aaagaagtga ttttgcctat aagcaaaaaa gccattaaaa
     4681 tcatagccga tgaacatgta gaaaaagaat ttggaacagg agttgtaaaa gttactcccg
     4741 ctcatgacat gaacgattat gaagtaggac ttagacataa tttagatttt ataagtgttt
     4801 ttaatgaaaa aggaatttta aacgagcatt gtttagagtt tcaaggttta gaacgcttag
     4861 aagcaagaga aaaaatcgta gccaaacttg aaagtcttgg ctttatagaa aaaatagaag
     4921 agcataacaa tcaaatagga tattgttatc gttgcaacaa tatagttgaa ccttatatct
     4981 ccaagcaatg gtttgtaaaa aaagaaatcg cccaagaaag tatagaaaaa gttgcacttg
     5041 gcgaaagtaa attttaccca aatcactgga taaatagctt taatgcttgg atgaaagatt
     5101 taagagattg gtgtatttca agacaacttt ggtgggggca tcaaattcct gtgtattatt
     5161 gcgaatgctc tcatgaatgg gcaagccaac atacgcctaa aacttgtcca aaatgtcaaa
     5221 gtcaaaattt caaacaagat gaagatgtac ttgatacttg gttttcttca ggactttggg
     5281 ctatgagtac tctaggctgg ggaaatgaaa attggggcaa agataaaatt tggtctgaaa
     5341 atgatttaga agatttttat cccaattctt tactcattac aggttttgat attttatttt
     5401 tctgggtggc tagaatgatg tttcaaagca ctaatgcttt acatcaactg ccttttaaag
     5461 atatttattt acatgctctt gtgaaagatg agcaaggtag aaaaatgagt aaaagtcttg
     5521 gaaatgtcat cgatccaaat gaaagtatta aagaatatag tgctgatatt ttacgcttta
     5581 ctttagcact tcttgctata caaggacgag atattaaact tagcaatgat aaacttttac
     5641 aagttagaaa ttttacaaat aaaatttata atgctacaaa ttatctgctt ttaaatgaaa
     5701 gtaaatttga agatttggaa aatatcacac ttcattcaga attagcaaaa tatatctatg
     5761 ccaaatttca aacttgtgtt aaggatgtaa gagaaaattt agacaattat cgctttaatg
     5821 atgcagctaa tactctatat aaattctttt gggatgattt ttgcgattgg ggtatagagc
     5881 ttagcaaagc cgaaaaatca agcgttaaag aacttggtag tattttcaaa gaagctttaa
     5941 aacttttaaa tcctttcatg ccttttatca gcgagtattt ataccacaaa ctaagcgata
     6001 cagaacttaa aacaagccct tctattatga taagcaaata tccaaaattt aaagaacaag
     6061 ataaaaatat agaaaaaatc ttttctttgc tcatagaaag catagttggt atccgccgtg
     6121 ctaaaagttt aatcgatctt ggaaattcta aaatagaaaa agcttatatc aaatttaacg
     6181 ataaaaaaat caaagatgaa atcaaagctt atatgaattt tatcatgatg ctcgcaaagt
     6241 gcgagcaaat agaatttagt gaagaaaaat taccaaaggc aatatgtgat gttagcgaga
     6301 atttagaaat ttttattacg cttgaaaatg ttgatttaag tggtatttta acaagacttg
     6361 aaaatcaaaa aaataagctt gaaaaagaaa gtttcaagct taactccatg ctttcaaatg
     6421 aaaaattcat cgctaacgca cctaaagagg tggttgagca aaataaagaa gctctagaaa
     6481 atttaaaaat tcaacttgaa aaaatatcag ttgaacttca aaatctaaga ggttaaaaat
     6541 ttgataaaaa taaaaaattt aaaaaaatat tatggcaagg aactcgtgat aaacgatgtt
     6601 tctttggaga ttaaaaaggg tgaaatttac gccatagtag gtcatagtgg agctggaaaa
     6661 tccactcttt taagatgtat taatggactt gagaattatc aagaaggaag tttaaaagtc
     6721 tttgatcaag aaattaaaga tttaagtcaa aaaaaatcaa aagagctaag agtgcttaga
     6781 aaagatatag ggatgatctt tcaaaatttt gccctaatgg aacgcaaaaa tgtatttgaa
     6841 aatgttgcta tgcctttaag aacacactat actcagtgta aatttcatgc caagcttttt
     6901 aataaagaat acatgagcga aaaagaaatt gcccaaaaag tcaattcctt acttgaaatc
     6961 gtagggcttg atcataaaaa taaatcctat ccaagagaac tgagcggggg gcaaaaacaa
     7021 cgcgttgcta ttgctagagc cttagcttta aacccaaaaa ttttacttag tgatgaagct
     7081 acttcggctc ttgatccaaa cactacaaaa aatattttag agcttatatc taaaatcaat
     7141 gctgaatttg ggattactgt tgttttagta actcacgaaa tggatgtagt aaaagacata
     7201 gctcaaaaag ctttattact tgaacatgga caaatcatag gaagtggagc aattgatgag
     7261 ctttttttaa ggcctaatgc caaaatgaaa gaatttttag gagaaagcga cttcttgcct
     7321 gagcacggac ttaatatcaa actttacttt ccaaaagaag ttgcccaaaa tagtgtcatc
     7381 actcatatgg caagaactct aaatatagac tttaacatag tttggggtaa aatagaaaaa
     7441 cttaatggaa aagccttggg aaatttagtt ataaatataa atgaaaagga taaagacaag
     7501 gttcttgatt acatagaaaa aagtggagta ttatgggagg tggcatcatg aatgaagaaa
     7561 acatctctat catcagtgct ttttttagta gaatttctca attttttaat gaattttctt
     7621 ggcaggatat taaagaagtg agtttaagtt ctattacaag tttcagtgaa aattatgaaa
     7681 acattttaaa acctgcgctt aatgaaacaa tttatatgag tttaatggct gtactatttg
     7741 gatttttatt ggctatcatt cctggaattt tacttgctat ttgggataaa aacggaatta
     7801 aagaaaataa aatcgcttat agcattttag attttattac aaatatactg cgtgcctttc
     7861 catttttaat tcttatagtt gttcttttac cactttctaa aatcatagta ggcacaagca
     7921 taggtacaaa tgctgccata gttcctttag ctatcggaat agctccttat ttggcaaaga
     7981 tgcttgaaag cgcttttaaa gaaatagaca aaggaatcat agaagcagca aaaagttatg
     8041 gtgctagcaa tattcaaatt atcttcaagg ttatctttag tgaggccctt cctgctataa
     8101 ttagcggaat tactctaact ttgatcttta ccattggttt ttctgctctt gctggaactg
     8161 tcggtggtgg aggtttggga gatgtcgcta ttcgctatgg ttatgaaaga tttaacaaag
     8221 aagttatgat tcaaactgta gttattttac ttatattagt tcagttagtt caaattctag
     8281 gtaatttatt ttatacttgg gctaaaaata gtaaaactac atatattatt gccactctat
     8341 tgattttact tggaattagc atagttatca atataaacaa tgatgaaaat ttcttttggc
     8401 aagtaattgt ttttatctta tttttgggaa gtttgcttta taaaggtttc gaaaaataag
     8461 gagattatat ctccttttaa gataaatata agttttttta agtaaaattt aaacaaaaaa
     8521 ttaaaggaat taaaatgatg tatcagatgc gttaatctga ctatcaacaa gtttttatat
     8581 gcttcttcct gatagtcaga gtgaatttat taagattaaa gcaagcacaa aatgactaaa
     8641 aaggaaaaaa atgaaaatca aatctttatt tatagtaagt attttaacat taagtcttaa
     8701 tgcaaatgca ttagaaacca tcacagttgc agcaactccc gtccctcatg ctgaaatcct
     8761 agagcaagta aaacctgatt tagaaaaaca aggctataaa cttgaaatca aagaatttac
     8821 agattatgtt ttacctaatc tagctgttga taacggagaa gccgatgcaa attttttcca
     8881 acatactcct tatttggaag aatttaataa aaacaaaggc accaaactta tcaaagtagc
     8941 cgccatacac atagaaccta tggctgttta ctccaagaaa tataaaagtc tagatgatat
     9001 taaagaaggg gttaaaatcg ccattccaaa tgatccaacc aatgaaagta gagctttaga
     9061 tattattgca aaaaaaggtt tggtaaaatt taaagataag gctttaaaaa cacctcttga
     9121 tattatagac aatcctaaaa aaattaaatt tgtagaatta aagcccgcac aacttccaag
     9181 agctttagat gatgttgatt ttgctgtaat taattccaac tacgctctct ctgcaaatct
     9241 aaatcctgca aaagatagcg tatttatcga agataaagaa agcccgtatg caaacattct
     9301 tgttgtaaga gtgggacatg aaaacgatcc aaaaatcaaa gccttaaccc aagctctaca
     9361 aagtgataaa atcaaacaat ttatcataga aaaatacaac ggatctgttt tacctgcttt
     9421 ttaattttgt cccttacctg gggacttttt tcttaaatac aaaggagttt ttatgaattt
     9481 atttaaaatt attatactcg cttgcattct aaatttatct agtctatttg cacaaaacat
     9541 tactatagga gccactccaa atccttttgg tagcttacta gaactaatga aagatgattt
     9601 taaaaacaaa gggtatgagc ttaaaatagt agaattttca gactatattt tgcccaatcg
     9661 tgcattagag gaaaaagaac ttgatgcaaa tttatatcaa cacaaacctt ttttagaaga
     9721 atacaaccta aagaaaggtt caaatttaat tgcaacaacg cctgtactta tagctccagt
     9781 aggagtttat agtaaaaaaa tcaaaaattt agaaaatctt aaagaaggtg ctagagttgc
     9841 tatacctaat gatgccacca atgaaagtag agctttagag cttttagaga aagcaaaatt
     9901 aatagagctt aacaaaaata ctctaaaaac cccattggac ataaacaaaa atccaaaaaa
     9961 acttaaattt atagagctta aagctgcaca acttccaaga gctttagatg atgttgatat
    10021 tgctataatt aattctaatt tcgcacttgg agccggtctg aatccaagta aagatactat
    10081 ttttagggaa gataaaaata gcccttatgt aaattatgtt gtggtacgct cagaagataa
    10141 aaatagcgaa aagaccaaag taattgatga aattttaaga agcgataaat ttaaagccat
    10201 cattaatgaa cattataaag atatattaat cccagctttt taggagtata acatgaatat
    10261 taaaaaaata tttttaagtg ttttatttac aattagcctt agttttggag cagataaaac
    10321 cataatcata ggtgcaacac caacgcctta tgctgaaatt ttaaatttct ccaaaccctt
    10381 atttcaagaa aaaggttgga agttaatagt taaggaattt aatgactata atatacctaa
    10441 tatcgcttta aatgaaaaag atttagatgc aaatttatat cagcataaac cttttttaga
    10501 tgattttaat acccacaaag gaacaaattt aagttcttta ggtgctattg ttttagttcc
    10561 tatggctata tattctaact ccataaaaga tataaaagat attcctaatg gtgctaaaat
    10621 cgctatacct aatgatgcta ccaatgaaag cagagctctt gatttactag ctaaagcaaa
    10681 tttaatagag tttaaaagtc aaagcaccct taaaacccct attgacataa gtaaaaatcc
    10741 aaaaaaactt aaatttatag agcttaaagc cgcacaactt ccaagagccc taaatgatac
    10801 tgatttggct gttattacca caaactatgc tcttggagca ggtttaaacc ctttaaaaga
    10861 tggtattttt atggaagata aagatagttt atatgctatt gttttagcta caataaaagg
    10921 tgaagaaaca agtcaaaaaa gtcttgttat taaaaaaatt ttaacaagcg ataaaattaa
    10981 aaattttatc atagaaaaat ataaaggctc tgttatccct actttttaac tctatacaaa
    11041 gccttctaaa ggctttgtta aacttataaa agctaaaata ctatttattg cattataatt
    11101 cttaggataa aaatgaaaat tattttttta acttttttta ttgtgataaa ttatatccaa
    11161 gcagctagtt tagaagaaat caaaacagca ctagctaaag aatttagaaa taattttcct
    11221 aaaattataa tttctcaaat tgatttaaaa ataacatcat tgcctaaaga ttttgatcaa
    11281 tatgaatttc taagaatcgc taatggacgt tttaatcaag cacaaggctt tttaagggct
    11341 gaatttaaaa ctccgcaaaa tatacaaaaa aatgtatttt ttagatattt cattcaagca
    11401 aatttagaag ttttaaaaag cgaacgcact ataaaaagag gagataaact tggagctttt
    11461 gactataaaa gcgtattgat tgattttgat aaagttcctt taaatgcctt aaccttagat
    11521 gatgtagata atcttgtagc taaaagcaat attaacaaaa acgctatttt aagagcaaat
    11581 atgtttaaaa ccacagcttt aatacgccga aatgatccta taatcggggt tttaagcgaa
    11641 gcaaatgttg atgttttaat cgaacttgtg gctttgcaaa gtgcaaatat gggcgaaagg
    11701 attcgtgcaa aaaacaaaga aggtaaagtt atgcaaggca tcgtagtggg taaaaatagg
    11761 atgattatac aatgaaggtt ttattaggaa tttctggttc aagcagtgtc aatttaggct
    11821 taaaattatt aaaaaattta gaaaatcaat gcgaacttta ttgtatttta actcaaggtg
    11881 caaaacttag tttcaaagct gaaaatgaag taaatttaga agaaatttgt caagaaaatt
    11941 ttaaatacac tcatttttta gatgataaaa atttaagtct aagtgtagca agtggatctt
    12001 ttggaataga aaaaactatc attgctcctt gttcgatttc aagtttagca aaaattcacg
    12061 ctggttttgc agacactctt ttaatgcgtg ctgcagcagt agccctaaaa gaaagaaaaa
    12121 aactcatctt aggcgtacgt gaaatgcctt tttctacttt aaatttagaa catatgttaa
    12181 aacttagcca aatgggagtt atcatcgcac ctcctattat cgcaagttat tctaaagcaa
    12241 acaatctaga gcaaatggaa aattttatcg taggtaaatg gttagatctt ttagaaataa
    12301 aacacaattt atatgaaaaa tggcaaaatt tttagtttaa atttgttata tttttaaaaa
    12361 aaattggagc aaaaatgact tgtttatatc ctgggacttt tgatcctatt accaacgggc
    12421 atttagatgt tataaaacgg gctttaaaaa tttttgatga agtcatcgtt gccatagcaa
    12481 aaagtgaaca taaaaaacct tgctatgatt tagaaaaacg caaagaacta gccctgcttg
    12541 caacacaaaa tttaaaaaat gttaaaatca ttgcttttga taatttactt gtagatttag
    12601 ccaaagaatt aaaagttaat actataatcc gtggacttag agcagtgagt gattttgaat
    12661 acgaattgca aattggctat gcaaatcacg cactttggga agatatggaa accatttatc
    12721 ttatgccaag tctaaaacat gcttttattt caagttctat tgttcgctct atagtagcac
    12781 atgggggcga tgtaagttct cttgttccaa aagaaattct acctttttta aaggatcaat
    12841 cttgtatgta gtttttgaag gtattgactg cgtaggaaaa agtacgcaaa tttcactttt
    12901 aaaagaaatt tacaaagacg ccatttttac actcgaacct ggcggaacag aacttggaaa
    12961 acatttaaga gaaattttac ttaataaaac tcatcctatt agcaaaagag ctgaactctt
    13021 gcttttttta gctgatcgtg ctcaacattt tgaagaaatc ttaaaaacca atcaaaacaa
    13081 actcattatt agcgatagaa gttttatttc aggcatggct tatgccaaag attttgaaaa
    13141 cgatttgctt tttgctttaa atagttttgc tttagaaaat ttttttccac aaaaaattat
    13201 ctttttaaaa ggagatgcaa accttatcca agaacgcctc agtcaaaaag aactagatag
    13261 catagaaaaa cgtggcattg agtatttttt aagtgtgcaa gataaactcg aaaaagtgct
    13321 tcatttttta aaagaaaaaa tttctataga aattttaaca cttgacgcaa aagaaagtaa
    13381 agaaaaatta caccaacaaa taaaggaatt tttacaatga ttaacgcttt aaaaggaatg
    13441 aaagatttat tagataaaga tgcatattat tatgaaaaag tgattaaaac ctgcgaagaa
    13501 gtagctaaaa actatggctt tacttttatc aatacaccgc atttagaact ttgcaccctt
    13561 tttaaaagaa gcgtaggaga aagttctgat atagtaggta aagaaatgta tgaatttatc
    13621 gataaaggcg aaaatcatgt ttgcatgcgt cctgaaggaa ctgctggggt ggtgcgtgcc
    13681 tatatagaaa aaaaactcga taaaaacact agtgtgaaaa gatggtttta tcatggctct
    13741 atgttccgct atgaaagacc ccaaaaggga cgcttaagag aatttcatca atttggcgtt
    13801 gaaagttttg gaaatgcaag cgtttatgaa gatgcaagta ttattttaat gttagtagaa
    13861 attttttcac gcttggatat taaatttaaa ttactgatta actctttagg ctgtttaaaa
    13921 tgtatgccaa aatatcgtga aaatttaata cattttttag atagcaaaga aggtttttgc
    13981 gaggattgtt tgcgtagaaa aaacttaaat cctattcgtg ttttagactg caaaaatgag
    14041 cattgccaaa gcttacttaa cgatgctccg cttttaaatc aaaatttatg ctcatcttgt
    14101 caaaaagact ttgaaatttt acaaagcgtt ttaaaagaaa atggagtgga ttttgaagtg
    14161 gattctaagc ttgttagagg gcttgattac tactctaaaa cggcttttga attcattagt
    14221 gatgaaattg gtgcaaaagc tgctattgct gggggcggaa gatatgatag acttattgaa
    14281 tatcttgatg gaaaaagtgg ttttggtgta ggttttgcca tgggcataga aagaattata
    14341 gccattttag aacaaaaaga agaaaaggtt caaagagaag gaatttatct ttgtgctatg
    14401 gatgaaattt atatccaaaa acttttgcat atcgctacaa atttaagaaa agaacataaa
    14461 gtgcttttaa gctatgaagc aagaaaacta gctaaacatc tcgaaaacgc ggataaaaat
    14521 aatgctgaaa tttttctttg catgggagaa aatgaagcac aaaatgaaag tttgttttat
    14581 aaaaatttag taaaaaaaga agaaaaaatg attaaaattt cagacttaaa gaaggtttta
    14641 tgatggatta tggtattgat atttggggaa atgaaaattt cattatcaaa aatggtaaag
    14701 tttgtatcaa tcacgagaaa aaacctgcta ttattgatat agttaaagaa ttaagagatg
    14761 atggatataa gggaccttta cttttaagat ttcctcatct catccaaaaa caaattgaaa
    14821 atatttacgg aaatttcaat aaagcaagaa aggaatttgg ctataaagga ggatttaacg
    14881 ctgtttatcc tttaaaggta aatcaatacc ctggttttgt aaaaaatctt gtaaagcttg
    14941 gaaaagacta taactacgga cttgaagcag gttctaaagc agagctttta ctcgctatgg
    15001 cttataataa cgaaggtgca cctattaccg taaacggctt taaagataga gaacttatca
    15061 acataggctt tatcgcagct gaaatgggac ataatatcac tttaactata gaaggactta
    15121 atgagcttga agctatcata gacatagcta aagaacgctt taaacctaaa ccaaatatag
    15181 gcttacgtgt gcgtttacat tctgctggag ttggaatttg ggcaaaaagc ggtgggatta
    15241 attctaaatt tggacttaca tccactgaac ttatagaagc ggtaaattta ctcaaagaaa
    15301 acaaactttt agaacaattt accatgattc actttcatct aggctcacaa attaccgaaa
    15361 ttcatccctt gaaaaaagcc ttaaatgaag caggaaatat ttacacagaa cttagaaaaa
    15421 tgggagctaa aaatctaaaa gctatcaatc ttggtggcgg tttagctgta gaatactcac
    15481 aatttaaaaa tgaaaaaagt agaaattata ccttaaggga atacgctaac gatgtagttt
    15541 ttatcctaaa aaatatagct gaacaaaaaa aagatttaga gcctgatatt ttcatagaaa
    15601 gtggacgttt tgtagcagct aatcacgctg ttttaattgc tcctgtatta gaactttttt
    15661 ctcaagaata cgcagaaaac aaactcatac ttaaaaaaca aaatccaaaa cttatcgatg
    15721 agctttatga tctttataaa agcataaaac cttccaatgc attagaatac ttgcacgata
    15781 gcatagatca tttagagagt attttaactc tttttgattt gggctatgtg gatttacaag
    15841 atcgttccaa tgctgaaatt ttaactcatt tgattacaaa aaaagccatc ttgcttttag
    15901 gtgataagca aaatcctgcg gatttacttg ctatacaaga tgaagtacaa gaaaggtatt
    15961 tggtaaattt ttcactcttt caaagcatac ccgatttttg gggcttagaa caaaatttcc
    16021 ctatcatgcc acttgatcgc ttagatgaag aaccgactcg aagtgcaagt atttgggata
    16081 taacctgcga tagtgatgga gaaatttcat actctaaaga taaaccttta tttttacacg
    16141 atgtagatgt agaaaaagaa aattattttc tagggttttt tcttgtaggt gcctatcaag
    16201 aagtacttgg aatgaaacac aatcttttta ctcatcctac tgaagctatt ataagtatca
    16261 atgaaaaagg ctatgaagtt gaggggatta tagaagcaca atccatactt gatgccttag
    16321 aagatttaga ctatgatata cacgctatca tggatatact taatgaacgc ataagtaatt
    16381 ctaagcttgt aaatgacaag caaaaaaagc atattttagg ggagctttat cttttcttaa
    16441 atgataatgg ttatttaaaa agcataggag tttagatgaa tttttggggt attataaaag
    16501 aagatttttc tcagccaaag gcacaagatc cagcttttaa ttcttgtata gaactttttt
    16561 ttaattaccc tggagtgtgg gctgtagtaa attaccgctt tgcacatttt ttttatataa
    16621 gaaattttaa acgcattgct agaatgatta gtggaatttc acaattctta actggggtag
    16681 atttacaccc tggcgcagaa cttggaaggc gtgtttttat agatcacgcc aatggagtgg
    16741 ttataggtca aacagcaatt atagaagatg atgttttaat ttatcaaggc gttactttag
    16801 gtggaacaag cctagaaaaa ggtgctaaac gccatccaac cataaaaaaa ggagtgatca
    16861 taggctcagg cgcaaaagta cttggcaata tcaccatagg agaaaatgcc aaaataggct
    16921 caaatgctgt agtagttaaa gatgtaggtg caaatttaac tgccgttggc attcctgctt
    16981 atattatcga agagcgtaaa aataaaaaca ttagagccat agatgcaaat tgcgatgaca
    17041 aactagaaaa gttagaaaag aaaattttag aacttgaaaa tcttatatta aaacaacctg
    17101 aatcacaaaa ataataattt tttat
//
LOCUS       DARBAC010000029        16708 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.029, whole genome shotgun sequence.
ACCESSION   DARBAC010000029 DARBAC010000000
VERSION     DARBAC010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16708
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.029"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..218
                     /locus_tag="SB799_000702"
     CDS             <1..218
                     /locus_tag="SB799_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867955.1"
                     /translation="LKYELDRGRIAGELYMYEKGMSPKQALGNWALDAEIKQALANGW
                     KASSESINSYVGSIMDRLNNLIGQTRA"
     gene            complement(277..1704)
                     /locus_tag="SB799_000703"
     CDS             complement(277..1704)
                     /locus_tag="SB799_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEG0867956.1"
                     /translation="MLINALYFVNSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLAYFALIHTPILYFWSKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFAILALRFSFLFNLFSLPFALFSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINTNLSQDTQIYIAEAGAR
                     LKGDIDEITRFLQPHISIVGEIGNAHLEYFKSVENIRSTKLEALNSKRLEKAFLHSST
                     QKEEDKLISLYDDKLSLIHSSLEGLEFKIDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYELCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKNGDLILFSNDAPSFM"
     gene            complement(1705..2424)
                     /locus_tag="SB799_000704"
     CDS             complement(1705..2424)
                     /locus_tag="SB799_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEG0867957.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGANKELMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLDVCFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGVNL
                     SPMMYETFKKVVDEDFSEIFAKQKAKSLIFWGKSDEATPLYCGEKMHELLKNSTFYPL
                     EGDHFFFLKHSAFIAQKIKEI"
     gene            complement(2426..2641)
                     /locus_tag="SB799_000705"
     CDS             complement(2426..2641)
                     /locus_tag="SB799_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEG0867958.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            complement(2701..3741)
                     /locus_tag="SB799_000706"
     CDS             complement(2701..3741)
                     /locus_tag="SB799_000706"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEG0867959.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFVFCDEERRFY
                     HIPSEKMNSKTFSTKAYKNEKELFIKQGGFFSKGFLKENKLECECVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTMLRKNQNSKEKLS
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEVYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYN
                     FLHSINGQKGKL"
     gene            complement(3751..4302)
                     /gene="ruvA"
                     /locus_tag="SB799_000707"
     CDS             complement(3751..4302)
                     /gene="ruvA"
                     /locus_tag="SB799_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEG0867960.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLGDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLASAQATGTSELIKEALKKLG"
     gene            complement(4278..6137)
                     /locus_tag="SB799_000708"
     CDS             complement(4278..6137)
                     /locus_tag="SB799_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HEG0867961.1"
                     /translation="MALDEKIIAYTENPARELLSVASRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIVAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIVVDENEVVLKHA
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDE
                     EFAILGEQISKLNHKINKIRQYILSSKNGILSVEKKITELKNQGQNVPVQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFYSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            6241..7692
                     /gene="murJ"
                     /locus_tag="SB799_000709"
     CDS             6241..7692
                     /gene="murJ"
                     /locus_tag="SB799_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEG0867962.1"
                     /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMALSIKF
                     KKAKAKLQGFYGNFFHGVLGSSATQFGSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSGQENLALKFMQRALAFLSILLIASSIIGSAFALEISKL
                     LFERGNFTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLII
                     SALCSMAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLV
                     IVALIVFTILLILIKPYILSFFIGIFTSFKGVF"
     gene            7692..9080
                     /locus_tag="SB799_000710"
     CDS             7692..9080
                     /locus_tag="SB799_000710"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEG0867963.1"
                     /translation="MRLLDSVAKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLANGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKS
                     EIAKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIF
                     GFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIRERLSSKKITLLD
                     TPNGTIWEKINA"
     gene            9073..10815
                     /locus_tag="SB799_000711"
     CDS             9073..10815
                     /locus_tag="SB799_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0867964.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDMLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            10847..11905
                     /locus_tag="SB799_000712"
     CDS             10847..11905
                     /locus_tag="SB799_000712"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEG0867965.1"
                     /translation="MAYEMIKPLLFKLNPEHAHALVEYSLRALSASFPGALSFLAHKY
                     IVDDESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VAKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            11902..13152
                     /locus_tag="SB799_000713"
     CDS             11902..13152
                     /locus_tag="SB799_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEG0867966.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTRTI
                     PKIHTKEPKQDGVKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDIDPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            13145..14041
                     /locus_tag="SB799_000714"
     CDS             13145..14041
                     /locus_tag="SB799_000714"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEG0867967.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SALTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLC
                     PPSKENFAKIEEVMKKYKIKGF"
     gene            14041..14820
                     /locus_tag="SB799_000715"
     CDS             14041..14820
                     /locus_tag="SB799_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HEG0867968.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGVNIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDADFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SPLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(14861..15166)
                     /locus_tag="SB799_000716"
     CDS             complement(14861..15166)
                     /locus_tag="SB799_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867969.1"
                     /translation="MELDQILLYAFIFLNLFAFFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFVGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(15179..15775)
                     /locus_tag="SB799_000717"
     CDS             complement(15179..15775)
                     /locus_tag="SB799_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0867970.1"
                     /translation="MQIIKQACGAYETNCYILFSEHGEIIIDPGFDALNFIKKHVKNP
                     LAILNTHGHYDHVWDNEKVKQAYQIPIYIHKNDAFMLEDPFNQGFMPSKADYLIDDEN
                     IISIGGLDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            15849..16589
                     /locus_tag="SB799_000718"
     CDS             15849..16589
                     /locus_tag="SB799_000718"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEG0867971.1"
                     /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK
                     RALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYTLAKYLNLHENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLLRT
                     LDPSLIAMLKNRMQKNTFKGKMPEILEI"
     gene            16593..>16708
                     /locus_tag="SB799_000719"
     CDS             16593..>16708
                     /locus_tag="SB799_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEG0867972.1"
                     /translation="MSEEKNYELWLDNYFFKPNFWQKCLAFILLPLSVFYAF"
BASE COUNT         5637 a         2219 c         2782 g         6070 t
ORIGIN      
        1 tattaaaata tgaacttgat agaggtcgta tagctggaga gctttatatg tatgaaaagg
       61 gtatgtctcc taagcaagct ttaggcaatt gggctttaga cgctgagatt aaacaagctc
      121 ttgctaatgg ctggaaagca agtagtgaaa gtataaattc ttatgttgga tctataatgg
      181 atagattaaa taatcttata ggacaaacta gggcttaaaa aagtatttgc acgaagtcaa
      241 attgaaaatg atgacatttg caaatactta tacgaatcac ataaaactag gcgcatcgtt
      301 tgaaaagagt attaaatctc cgttttttgt ctctttagct agagtttgaa ctagctggct
      361 tttttcttta agtataatgg tttttatttt taactctttt ttgaaaattt cagcattgat
      421 ttgtgcgcta atgatagcaa gatcaaaaca ctcattgatg attttagcaa gttttatatt
      481 ttcttcttcg cttacttcca ctataccagg acttactaaa actttgcgtc ctttatagct
      541 tttacaaagt tcatagcttg tgctcatacc tttaaaattt ccattaaaac catcatctat
      601 gataaattta ggctctcttg aaagcacttg caagcgatgt tctacggagt ttatatttaa
      661 aacttgcttt tgaatttttt ctagctttat accaagataa tgagcacaaa gtatacaaac
      721 acaaagattt tgcgcgttaa aatcccctaa aatttgactt ttaaaatcat aggatttatt
      781 ttctatatcg attttaaatt ctaaaccttc aagacttgaa tgaataagac ttaatttatc
      841 atcataaagg ctgatgagtt tatcttcttc tttttgggtg ctagagtgta aaaaagcctt
      901 ttctagtctt ttggaattta aggcttcaag tttggttgaa cggatatttt caacactttt
      961 aaaatactct aaatgtgcat tgcctatctc tcctactatg ctgatgtgag gttgtaaaaa
     1021 acgagtgatt tcatcaatat cgcctttaag tctagcacct gcttcagcta tgtaaatttg
     1081 agtatcttgg cttaaattgg tattgatatc agcaactata cctagcaagg tattgacaga
     1141 gcgtggtgtt ttgtagcttt taaagtcatc ttttaaaagt tcgtatagaa aatttttaat
     1201 acttgttttt ccaaaacttg cggtaatgag tatgattttt aaattttcat tggctcttaa
     1261 tttggctttg gcttgttttt tataatataa atttgtaaaa aactcataaa ttttaagact
     1321 aaataaagca aaaggaaggc taaaaagatt aaaaagaaaa gaaaaacgca aagcaagtat
     1381 agcaaaaata gcattataaa caaaaacaaa aacaaaaaac catttaacct tacttgtaaa
     1441 aacaagcttt ttatctatac ctttgctcca aaaatacaaa atcggagtat ggatcaatgc
     1501 aaaatatgcc aaagaatata aaggaaaagc taagaataaa aaataaggaa taaataaaaa
     1561 atacaaatgc cacaaaggtt tatgataatg aaaaaacacg cgtttaaatt tataagaata
     1621 ccattgtaaa gcactcataa gataaaaagc tatacaaaaa ttaaaaaata aagaattgac
     1681 aaaataaaga gcattgataa gcatttaaat ttccttgatt ttttgagcta tgaaagcaga
     1741 atgttttaaa aagaaaaaat gatccccctc taaaggataa aaagtgctat tttttaaaag
     1801 ttcatgcatt ttttcaccac aatacaaagg cgtagcttca tcgctttttc cccaaaaaat
     1861 caagctttta gccttttgct tggcaaaaat ttcactaaaa tcctcatcaa caaccttttt
     1921 aaaggtttca tacatcatag gactaagatt tactccatct ttactagcaa aatagcgata
     1981 aaatttcccc aaaccaaaga gttttaaaat tttaaaaata cggattttaa aacgcacttt
     2041 tagggatttt ttagccaaaa ttcccgcact tgaaagtaag attagagtgt ctttttcttt
     2101 tgcgagtagg gtacttactt ttccaccaaa agaatgtccc atgaaaaaac agacatcgag
     2161 ttttttttgt tttaaaaaaa gttctgtgat attggcataa tcttgagtgt ttaaaatttc
     2221 ttccacgctt gaatttccaa aacccgctaa atccatataa atttgacaaa aatctttcaa
     2281 aaaaggacaa aaactttgct tcataagttc tttattggct ccccagccgt gtaagataag
     2341 tatttgcggt aaggaaagat cacctaaaat ttcataagaa atttgataag ttttgttttt
     2401 ataagaaagt tgagtttgag ccattttaag ccttttgatt tttgtagata ttttctaaaa
     2461 gttgcatggc attttgtaag cgttcaaatt ctttcatact aagcattaca gcttcaaatt
     2521 tgttattttt taaaataact atttttccac tttcgctttt tttgagtttt tccataatgg
     2581 ggctaaaatt tcttaccact tcggtggcag tgtaaatttc atcttgttta aaagagagca
     2641 tttttcttcc taaaatacgc taaattttat gtataattta gcgtattttg acttaaaagc
     2701 ttataatttt cctttttgtc cgttgatgga gtgaaggaag ttgtaattga tttttatcat
     2761 tttttcaagt gaaatttgat cagctaaagc gtttaaagtg gtattaaaat ctttaaaaag
     2821 ataattagcc aaagaaccag gatttgggtt gatttcattt aaatatactt cattatccag
     2881 tataaaaaaa tcgcagcgta ttaaagcacc tttaaacaaa ggattgtaga tctttttaaa
     2941 actgtctttg agtttttctt ttaattcttc gcttaaatcc gcttctataa gttcattgtg
     3001 tcctgaaaag ctaagatatt tttgttcaaa gtctaaaaat tcttttttct ttggctcttc
     3061 tataatggaa aaaacaaact catcattgat catacatcct gcaagattgt attctttgat
     3121 attgttttta aattcttcta ctacaagatc attgtcaaat tcaaaaccta catctttggc
     3181 gtattctaaa tctttttcat cttttactat gctaatacct atactacttc caagtcttgc
     3241 aggtttgata atacaaggaa aactaagctt ttctttagag ttttgatttt ttcttagcat
     3301 ggtataatca agtgttttta caccaacgct tttggcataa agtttggtaa gttctttgtt
     3361 gaaagataat acactagctt caagcctagg tcctataaat ttaatagaat aaaactcaaa
     3421 taaagccgca atttttccat cttctccatc tctaccatgg ataagattga tcacgcattc
     3481 gcactctagt ttattttctt ttaaaaagcc tttgctaaaa aaacctcctt gtttgatgaa
     3541 gagttctttt tcatttttat aagctttggt gctaaaagtt ttagaattca ttttttcgct
     3601 tggaatgtga taaaatcttc tttcttcatc gcaaaaaaca aattctaaat tttgattgat
     3661 aactttttta agtactacag cacttactat actgatctca tgttcataag aatttccgcc
     3721 aaaaagtatt gcaaatttca ttttattcct ttatcctagt tttttaagag cttctttgat
     3781 gagttcgctt gttcctgttg cttgagcact tgctaaaaca cttatgattt tttcttgttt
     3841 aaagcctaga gtaagaagtg cggctaaggc ttcgctttta tcatcgctta cattttcaag
     3901 tttggttttt gtgtcagaaa gttctactat aatgcgtttt gcactttttg gacctattcc
     3961 aggtactttt ttaagcacgc tttcatcgcc caaacttaac gctttgtaaa aagaatttac
     4021 atcaagacta gagcataccg ccatagcagt atttgcaccc actccattga cttttaaaag
     4081 catttcaaac attttttgtt catctttatc caagaagcca taaaatttat tagaatcttc
     4141 tttgatgatt tgagtgataa aaaactcatg cttttcttgg gtttgaattt tagcagaaca
     4201 aaaaagagaa ataaatatcc catagcttaa accactagca catttaacaa tgataaaagt
     4261 aggttctttt tttgtgatta ttccttcgat gccgacaacc atgctatatc cttttcttca
     4321 taatctaatt ttttatgtat ttctatactt tcttggttgt tttgtatgac ttttttaatg
     4381 cctataaatt tagcactttc attaacaaat gaagagtaaa aaatatcttc tttaggctct
     4441 agaagtgaaa atttgatttc attcatatca gtccatttgc cgcttttatt tataaaagtt
     4501 gcttcaaaaa gcattttttg caaattgatt aattctaatt gtaaagattt tttgcgttca
     4561 agaagttctt tttcttcatt ttgtagttta tttaattcaa gattttgtaa agagaaatct
     4621 tttagggctt tttcgtattg tacaggaaca ttttgacctt gatttttaag ttctgttatc
     4681 tttttttcaa cgcttaaaat tccatttttg cttgataaaa tgtattgtct tattttattt
     4741 attttatgat ttaacttaga aatttgctct cctaaaatcg caaattcttc atcataattt
     4801 ttatcaagag ttttaatttt agcatgaaat ttattgttat ccccgttaat gcgttctatt
     4861 gtggtgtttt caaaaaacac acaagaatta ttactttcta aattttctat atagatttta
     4921 tcagcttgta tatttccgcc taaacttttt ttaattctca cttctttggc tttgattgtt
     4981 ccaccttcga gcaaatctat atttaaaatt tcggcttccg caaatcctct atgagttttt
     5041 atataggctt gtttggcttg aattttggct ttagagtgtg tagtgccttc aattttcatt
     5101 ttagtggcat taagttgagt gttgcttcct acgcttccga ctacatttaa ttcttcacat
     5161 tctatcccaa caccagaatt tacagcatct tttacttctg aaagaaattt tatattgatt
     5221 ttgacatttt tgtctagtcc agctcttata atccctatat ttttaaaatc taccccatta
     5281 aaatctagtt cattggcaat atcaaatttt tcaccatctt gtactacata accttttttt
     5341 aaagctatat attctgtgta tccatcttgc tctacttgtt taaaagccga agaacaagaa
     5401 aatttaactt tattttcatt tgcggctaaa acttttaagg tgtgtaaatt taagtctttt
     5461 ccttctttac cttgtttaaa tttggcgtgt tttaaaacaa cttcattttc atcaacaaca
     5521 ataatacctg agcgtttttc atcgatagtg tagtttttgg ttttttcttt ataagtcaag
     5581 atcagggatt catcttgact ttctatagga tcaatacctt gtgcaacggt gatttgtata
     5641 gttttattta aaggggtgtt tttatgttga ttgcaaaaag acattaaatt tttcttaaaa
     5701 tcaaaaatgc ggatacctat taaaaattta agtttcaaca tctttttata aatattttgc
     5761 aaaagttcta gtgctagttt ttcatgaaag tctaaatttg taaaatcaat ttgagcaact
     5821 attttggtta aatttttatt tgcaaccagt ttgactgctt gagatgcttt gctttggttt
     5881 ataccgtgga aaatttctat tttgtattct tgcttgattt gaagatcatt ttttaaaaaa
     5941 atttcatctt tatcaaaaag agttaattct ttttcagaga ttttttccca ttctaaatct
     6001 ccaaaacgat attgtgtaga aaatgccaat aaactaaaat caagctcatt taagctaagg
     6061 tttgttcgtg aagctacgct taaaagctct cgagctggat tttctgtata ggcaataatt
     6121 ttttcatcca aagccaaaac tttccccttg taaaaaatta agaatgtaat tatagtcaat
     6181 ttttaatcaa ttttagttaa aatagttctc tttatatttt gaaatttatg aaaaaattta
     6241 atgaagagtt tagtatttaa aaattttatt atcaatgctt taggaatttt attttcaaga
     6301 attttagggc ttgctagaga tgttttaata gcgctttttt taggagcagg gctttatagt
     6361 gatatttttt ttgtggcttt aaaaatgcct gcttttttta gaagaatttt tgcagaaggg
     6421 gcttttggac aaagtttttt gcctaatttt gtaaaagcga aaaaaaaagg agctttttgt
     6481 gttagtgtaa tgatgcaatt tagccttata gtttttttat tttgtctttt ggtaagtttt
     6541 ttttcctctt tttttactaa gctttttgct tttgggttta acgcagatac tatagcttta
     6601 gcggctcctt tggtggcgat taatttttgg tatttgtttt ttattttttt agttactttt
     6661 ttaggagcta ttttaaatta tagacaaaaa tttttcatta cctctttttc tgcggcatta
     6721 tttaacttaa gtattgttat agctgccttt tttgtggata aaaatgcacc gcaaaataca
     6781 ctttattatt tttcttatgc aacggtttta agcggggtgg cacagcttat tttacatttg
     6841 cttgttttaa aaaacaatcc tgtaatccgt gctatggctt taagtataaa atttaaaaaa
     6901 gccaaggcga aattacaagg tttttatggc aatttttttc atggagtttt aggttcttct
     6961 gcgactcaat ttggctcatt gcttgataca actatagcta gttttttaat gagcgggagt
     7021 atttcttatc tttattatgc aaatcgtgtc ttccaactcc cccttgcact ttttgctatc
     7081 gctctaactc aagtttcttt tccaaaaatt ttaaaacatt taaaaagtgg tcaagaaaat
     7141 ttagccttaa aatttatgca aagagcatta gcgtttttaa gcattttgct tattgcttct
     7201 agtattatag gttctgcgtt tgctttggaa atttcaaagc ttttatttga aagaggaaat
     7261 ttcactcacg aagatagtgt gattacggct tatgttttga ttgcttatct tatagggctt
     7321 ttaccttttg gtttgcaaaa gcttttttct ttgtggcttt atgcaaaatt taaacaaaaa
     7381 acagcagctt ggatcgcggt aaaatcttta attatcagtg ctttatgttc tatggctttt
     7441 atatttttga ttaaagatga aagtttaaag gttattgcag tagcactttc aagctctatt
     7501 agtgcttttt atttgcttgg agctaatatc aaagaatttg gttttaagaa attttttgct
     7561 ttaatatcta ttaaaatttg cttgttggtt atagttgctt tgattgtttt tacaatctta
     7621 cttattttga ttaaacctta tattttaagt ttttttatag gaatttttac aagttttaaa
     7681 ggagtttttt aatgagatta ttagacagtg tagcaaaaga gaaaataaaa cttgataaaa
     7741 aagatattag tatttactta tgcgggccta cggtttatga tgatgcacat ttaggacatg
     7801 caagaagtag tgtttgtttt gatcttttgc gtagggtttt acttgctaat ggcaataggg
     7861 taaaatttgc tagaaattat acagatattg atgataagat tttgaaaaaa atggctcaaa
     7921 gtggtcaaac tttagaggaa attacggaat tttatatcaa aagttatgaa gaggatatga
     7981 gggttttaaa tgtattagat cctgatttta aacctcgtgc aacgcattat ataacagcta
     8041 tgcttgattt gattaaaaag cttgctaagg atgggtttgt ttatactcta gaagatggaa
     8101 tttattttga tacaagtaaa gatgaaaaat atttaagcct atcaaatcgc aatttagaag
     8161 aaaatatctc tcgtctaagt aatgaagtgc aaaaaagaaa tgaaagcgat tttgtgcttt
     8221 ggaaatttga tgaaaatttt tacgaaagtg aatttggcaa agggcgtcca ggttggcata
     8281 ctgaatgtgt tgctatgatt gattctattt ttgaaaatac tcttgatata catgctggag
     8341 ggatagattt gctttttcct catcatgaaa atgaagctgc gcaatgtcgt tgtggatgta
     8401 agagaaaatt agcaaatatt tggcttcata atggttttgt aaaaatcgat ggtgaaaaaa
     8461 tgagtaaaag tttaaataat agttttttta taaaagatgc tttaaaagaa tttatgggcg
     8521 aggctttaag attttatctt ttgagttctc attatagatc tcattttaat tattctttat
     8581 cggatttaga aaatgctaaa aaacgtttag ataaatttta tcgccttaaa aaaagattgg
     8641 atttaggtga aatttctgat tttgatgttt taaatgatat tgaaataaaa agcgaaattg
     8701 ctaagcaaat tttagagatt ttaaatgatg atttaaatat ttctaaagcc ttagctcttt
     8761 tggatgattt tatcagtagt gcaaatttag agttggataa agaaagcaaa aataaaattt
     8821 taaaacaaaa tatcaaagaa gctttaagcg agctagctaa aatttttggc tttggtttta
     8881 tggatacaac tttatatttt caatggggtg taagcaaaga agaacgagaa gaaattgaaa
     8941 agttaatttt agaaagaact gaggctaaga aaaacaaaga ttttaacaca gctgatgcaa
     9001 taagagagcg attaagtagt aaaaaaatca ctcttttaga tactccaaat ggaacaattt
     9061 gggagaaaat aaatgcataa tgagatgaat ttaaaagagg ttttaatacg ctttaagccc
     9121 ttttataaaa gatattggaa acaatttgct atagctattt tcggtatgat tttagcaagc
     9181 ggaggaactg ctggaagttt ttatgcttta gagcctattt taaattatat tttcgttgaa
     9241 aaaaatgaag ctttacttta tacagtgcct tttttgctag tattgatgta tttttttaaa
     9301 aatcttggaa cttatttaca aagtttttat gtttccttta taggaacaga tatgttaaga
     9361 gtattgcgtg ctagggtttt gaaaaatgtt ttacgcttgg atatggattt ttttaaacgc
     9421 tatagaagcg gagagcttgt aagtcgttgt actaatgata ttaatgcact tcaaagcata
     9481 gtatcaaaca ttattcctga tttttttaga gagcttttaa ctgctatagg actgcttgcg
     9541 gtagtcttgt atcaaagtcc tactttggct ttttttgctt tagtgatttt gcctttagct
     9601 atttttcctt tggtatggtt tgctaaaaaa cttaaaaaat atgcaagaaa tatacaagaa
     9661 acaaattcgg atttactttc ttatttgggt gaaatttttt caaatattga attgatcaaa
     9721 gctaatgata atgaaaaaaa agaaagtgat aaatttgcta agcataatga tactttatgt
     9781 aaattaaacc taaaatccgc acgtattgat gcacttacaa gtcctttaat ggatatgatg
     9841 ggttctgttg gggttgctgt ggtgattatt gtagggggta gagaggttat caatggttct
     9901 atgagtgtgg gaagttttat cagttttgtt tcggcacttt ttgcgatata tactccttta
     9961 aagcgtcttt cgtctttata tggaaaactt caaggtgctg ttgcggcaag tgaaagaact
    10021 ttttatttat tggatttaga acctcaaatt aaaggtggaa gcaaagaatt aaaaaacatt
    10081 gaaaaaatta gctttgaaaa tgttgaattt gcttatgaaa atccgcataa aagtgtttta
    10141 aaaggcgtaa attttgattt tgttaaaggg caaatgcttg ctcttgtagg gacaagtggg
    10201 ggtggtaaat cttctattat taatcttttg atgtattttt atgaaaagca aaaaggtaaa
    10261 attttactca atcaagaaga tattagcact tttaccatag aaagcttaca tgctaaaata
    10321 ggacttgtaa cgcaaaatat ttatcttttt aatgatagtt ttgctgcaaa tattgcttat
    10381 agcgaagagt tagaagaaga aaaagtcatc caagctttaa aattggccaa tgcctatgaa
    10441 tttgttaaag aaatgggtgg gatttgggct gaagtgaaag aacatggtaa gaacttaagt
    10501 ggagggcaaa aacaaagaat agcaatcgct agagctttat ataaaaatcc tgatatgctt
    10561 atttttgatg aagcaacttc agctttggat aatgaaagtg aaaaagcaat agttaaaact
    10621 atagaaaatt taaaacaaga tagattgatt ttagtggttg cacatcgttt aagcactata
    10681 gaaaatgcag ataaaatagt agtattggat aagggcaagg tattggcaat aggtaaagat
    10741 gaagagcttt tgcaaacttg ttctttgtat caaaaattta aaagcaaaga aaaaacaaag
    10801 cctagcttta gttaatttta gttagaattt caaaaaggat taaaaaatgg cttatgaaat
    10861 gataaaacct ttacttttta agttaaaccc tgagcatgca catgctttgg ttgaatatag
    10921 cttaagggct ttaagtgcta gttttccagg agctttaagt tttttagcac acaaatatat
    10981 agttgatgat gagagtttaa ggcaaaattt acttggactt gattttaata atcctgtagg
    11041 tttagcagga ggctttgata aaaatgccac tatgataaga cctttgagtg ctttaggatt
    11101 tggtttttta gaagtgggaa cttttactcc aaaacctcaa gaaggcaatg aaaagccacg
    11161 cctatttaga cttgtaaaac aagaaagtat acaaaatgct atgggtttta acaacgaagg
    11221 tgctgaaaag attgctttaa gacttgcaaa aacttatcct tttgttttgc ctttaggggt
    11281 aaatataggg aaaaataaaa tcactccaaa tgataaagcc ttggaggatt attttacttt
    11341 gtttagagat tttaaggatt tgtgtgatta ttttatcgtt aatatctcat ctcctaatac
    11401 taaaaattta agagagttgc aaaatgatga ttttttaaat accttgcttg aagaagccaa
    11461 aaaaatcact tctaagccta ttttgataaa aattgctcct gatatgaaaa tagatgatgc
    11521 tttaaattta tgtgaaaatg ccattaaaaa aggtgcagat gggtttatat tagccaatac
    11581 tagtgttgat tatagcttgc tagataataa tcgtactttt ggtggtatta gcggaaggct
    11641 gattacggaa aaaagtggta tttttttcaa agaagtagct aaaattcttt ttggcaaaac
    11701 cttgcttatt gcaagtggag ggattgatag tgctgatatt gcttatgagc gtattaaaaa
    11761 tggggctaat ttagtgcaag tttatacagc tttgattttt aaaggccctt ctttggtaaa
    11821 aaatatcaat caaaatctta tagagctttt aagaaaagat ggttttttac acattagcga
    11881 agctgttggg gtaaatttaa aatgattgct tatgaaaaaa ttcaattaaa aaacaagctt
    11941 gaagtttatg ctttacctgt aaataaaaat agcgatgtga ttagcgttga tattttttat
    12001 aaagtgggtt caagaaatga gatcatggga aaaagcggca tagctcatat gctagaacat
    12061 ttaaatttta aaagtactaa aaatttaaaa gctggcgaat ttgatgagat tgttaagggt
    12121 tttggtggtg tggataatgc aagcacaggt tttgactata ctcattatta tattaaatgt
    12181 gcgaagaaaa atttagataa agctttggaa ctttttgcag aacttatggc aaatttaaat
    12241 ttaaaagatg aagaatttca gcctgaaaga gcagtggttt tagaagagcg tagatggaga
    12301 acagataata atcctttggg atatctttat tttagacttt ttaatcatgc atttatgtat
    12361 catccttatc attggactcc tataggtttt tttaaggata tagaaaattg gagcattgaa
    12421 gatattaaag aatttcatag tatttattat caacctaaaa atgcgatttt acttgtaagt
    12481 ggcgatatag aaagtaaaga agtttttgag ctttcaaaaa aacattttga aaagattaaa
    12541 aatactagga ctatacctaa aattcacaca aaagagccta agcaagatgg agtaaaaaga
    12601 atatatttgc ataaaaactc agatactgaa ctattagccc ttgcttataa aattccaaat
    12661 ttcaagcaca aagatatacc tgctttaaat gctttatccg agcttttagg aagtgggaaa
    12721 agttctttaa tgagtgaaat tttgattgat aaattaaatt taatcaatga ttattatgct
    12781 tatgttaatg attgtataga tgaaaattta tttattttta tttgtaattg taaccccaat
    12841 gttaatgcag aaaaagtaga aaaagagctt ttaaaaatca ttgataaact taaaatgggt
    12901 aaaatttctc aaaaagattt gcaaagagtg aaaaataatg tcaaaagtga ttttattttc
    12961 tcacttaaca atgctagtgc agtggcaaat atttatggtt catatctagc aagaggggat
    13021 atcgatcctt tgttaaatta tgagaaagat atacaaaatt tggaattaaa agatttgatt
    13081 tcttgtgcta aaaaatattt tattcaagaa aattcaacta cggtaattct aagaaaggat
    13141 tcaaatggat aaaaatatta tcattggggc gatgacggcc cttattacac cgtttaaaaa
    13201 tggaaaagtt gatgagcaaa gttatgcaag attgattaaa agacaaatag aaaatggcat
    13261 cgatgcagta gttccagtag gaacaacagg agaaagtgca actttaaccc atgaagaaca
    13321 tagaacttgc atagaaatag ccgttgaaac ttgcaaagga actaaggtta aggttttagc
    13381 aggtgcggga agtaatgcaa ctcatgaggc agtgggtttg gctaaatttg ctaaagaaca
    13441 tggtgccgat gggattttaa gtgtggcacc gtattacaat aaacctacgc aacaaggact
    13501 ttatgagcat tataaggcta ttgcgcaaag tgtagatatt cctgtgcttt tatataatgt
    13561 tccaggaaga acaggttgtg aaatttcaac agatactatt atcaagcttt ttagagattg
    13621 tgaaaatatt tatggggtaa aagaagcgag tggaaatatc gataagtgtg tggatttgct
    13681 tgcgcacgaa cctagaatga tgcttatttc aggagaagat gcgatcaatt atcctatact
    13741 ttcaaatggc ggaaagggag ttatttcagt aacttcaaat ttattacccg atatgattag
    13801 cgctttaact catttcgctt tagatgaaaa ttataaagaa gctaaaaaaa tcaatgatga
    13861 actttataat atcaataaaa ttttattttg cgaaagtaat cctattccta ttaaaacggc
    13921 tatgtatata gctggattga tagaaagttt ggagtttaga cttcctcttt gtcctccaag
    13981 taaggaaaat tttgctaaaa ttgaagaagt gatgaaaaaa tataagatca aaggatttta
    14041 atgaatacag aatttcaagg aaaaacttta gtaatcagcg gtggaactcg tgggataggt
    14101 aaggctatag tttatgaatt tgctaaagtg ggtgtaaata tagcttttac ttataattct
    14161 aatgcacaaa ttgctgatga aatggtacaa gatttggaaa aaaattataa aattaaagct
    14221 agagcttatg aatttaatat cttagaacct gaaacttata aagaactttt tgaaaaaatt
    14281 gatgcggatt ttgatagagt ggattatttc atctcaaatg ctatcatttc aggacgtgcg
    14341 gttgtaggtg gttatactaa atttatgaaa ttaaaaccaa aaggaattaa taacatcttt
    14401 acagccacag taaatgcttt tgttgtgggc gcacaagaag cagctaaaag aatggaaaaa
    14461 gtagggggtg gaagcattat ttctatctca tctacaggaa atttagtgta tatagaaaat
    14521 tattcaggtc atggcacagc aaaagctgcc gtagaagcta tggcaagata tgcggctact
    14581 gaacttggag aaaaaaatat ccgtgtaaat gtcgtaagtg gtgggcctat tgaaactgat
    14641 gctttaagag cttttacaaa ttatgaagaa gtaaaacagg ctactataaa tttaagtcct
    14701 ttaaatcgca tggggcagcc tgaggatttg gctggagcgt gtctttttct ttgttcaagt
    14761 aaggcaagtt gggtaacagg acatactttc atcgttgatg gtggtacaac ttttaaataa
    14821 aaattaagaa aaatcaatgg atttttctta aaaatatttt tcaatcaagt tttaatttcc
    14881 atcctaaaaa aacacttaat aatgcaagta aaaaaataaa atttaaagtc caattgccaa
    14941 aacctacaaa acctatagat aatacgctgt aaaaaaatcc tcccacagct gaataaatac
    15001 aaatcgtact taaagatcca ttttctgcca tttttttaca tgggcagatt ttataaaatt
    15061 ttttatcgtt aaattgattt ttctttttat ttcccaaaaa taaaccaaaa aaggcaaaaa
    15121 gatttaaaaa aataaaagca tataataaaa tttgatctaa ttccatttta aatatacctt
    15181 aaaagtatct aagccaagag ggtagatgga cttgctcttc ttttaaagta gtctcttgtc
    15241 catgtcctgg taaaagttta aaatcttctt tgtaagtcat aactttttct aagctttgtt
    15301 tcattaaatt tgcatctgaa taaggaaaat cccatcttcc tatgcttcta taaaataaaa
    15361 aatctccact aaacatgata tttttaccta caatttctat catagtgcaa cctggtgtgt
    15421 gtcctggtaa aaagtgaaat ttaaagtcaa gtccgcctat agaaatgata ttttcatcat
    15481 caatcaaata atccgctttg ctaggcataa aaccttgatt aaaaggatct tcaagcataa
    15541 aagcatcatt tttatgaata taaatgggga tttgataggc ttgttttact ttttcattat
    15601 cccaaacatg atcgtaatgt ccgtgagtgt ttaaaatcgc taaaggattt tttacatgtt
    15661 ttttgatgaa atttagtgca tcaaaaccag gatcaatgat aatttctcca tgctcactaa
    15721 ataaaatata acaatttgtc tcataagctc cacaagcttg tttgataatt tgcatttttt
    15781 acctctttaa taaaaaattt gccttaaata aatataatta tacattaaat ttttaaaagg
    15841 caagctttat ggattggcaa aagattacgg aaaaaatgtg tgattttata caagaaaaag
    15901 tgaaaaattc tcaaagtcaa ggtgttgttt tggggcttag tggcgggatt gattctgctt
    15961 tagtagcaac gctttgcaaa agagctttaa aagagaatgt ttttgctctt ttaatgccaa
    16021 ctcaaatttc aaataaagcc aatcttgaag acgctttaag gctttgtgcg gatttaaatc
    16081 ttgaatataa aatcatagaa attcaaagca ttttggatgc ttttataaag caaagtgaaa
    16141 ataccactct agtatctttg ggaaattttg cagcgcgtat tagaatgagt ttgctttatg
    16201 attattctgc tttgaaaaat tctttagtca taggcacttc taataaaagc gaattacttt
    16261 tgggttatgg tacgatttat ggagatttag cttgtgcttt taatcctata ggatcgcttt
    16321 ataaaagtga aatttatacc ttagcaaaat accttaactt gcatgaaaat tttatcaaaa
    16381 aagctccaag tgcggatctt tgggaaaatc aaagcgatga ggcggatttg ggtttttctt
    16441 atgcaaaaat cgatgaaggt ttaaaagcct tagaaactaa tgatgaaaaa cttttaagaa
    16501 cgcttgatcc ttctttgatt gctatgctaa aaaatcgcat gcaaaaaaat acttttaagg
    16561 gaaaaatgcc tgaaattttg gaaatttaaa caatgagtga agaaaaaaat tatgaacttt
    16621 ggcttgataa ttattttttt aagcctaatt tttggcaaaa atgccttgct tttatacttt
    16681 tacctttaag tgtgttttat gctttttt
//
LOCUS       DARBAC010000030        16337 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.030, whole genome shotgun sequence.
ACCESSION   DARBAC010000030 DARBAC010000000
VERSION     DARBAC010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16337
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.030"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..590
                     /locus_tag="SB799_000720"
     CDS             <1..590
                     /locus_tag="SB799_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867973.1"
                     /translation="DGLNKNEFFNLSKFKLENNNVLYLQNEKNHLKNDANYAYSKLKN
                     LNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLIKRFKEGNLELSAAEYEV
                     LLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSEALRAHLYLLAEFGLLDE
                     LREQIHNDDKKFNDFKAFLALREKNIKINLNQLIQ"
     gene            587..1513
                     /locus_tag="SB799_000721"
     CDS             587..1513
                     /locus_tag="SB799_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEG0867974.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFVSIHGRTRKQLYSGKADYESIASAKESVKIPVIANGDINAQNAKEVYEITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GYKDASAFRDEVNRIDNTEKMRKKIEEFFSLT"
     gene            complement(1538..2740)
                     /locus_tag="SB799_000722"
     CDS             complement(1538..2740)
                     /locus_tag="SB799_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0867975.1"
                     /translation="MINGINSYSNYNYTNTFSNTTSNTKSSNAIANNNLVSDKSQAVD
                     KILGYGVDKEGFFTSDFNEAAGLPKDYKIYADGLNNFVNNFIKRQPFYSQIDIAKTIG
                     NAYNSFSSFVKDKGLGESFQEQDLKNLSQKDGVNYWQELQSDNAFIWKLTDENIADLG
                     SNKYQIHDNKISKGGALIAFFINNLSTIKGQTTLLGKLAGLNSDTDNNEIKEFLSFMN
                     KNPLKYSYEQDGWGNPMGDSLSIWNYINRAKNLGDDKLIKTIKNLGDEYNKLINSNMS
                     LEEFKTKYLDFKQRHDEFVKSLEEAEKAKGVDYSNPLKNTNNKETSEEGKEKPFKPIQ
                     AESKNKETYKDDNTRSELVKKLLKDKFSTSKELELLFGMKFSDDDAGEFNKILSLNST
                     PKSIDIKA"
     gene            complement(2860..3270)
                     /gene="ybeY"
                     /locus_tag="SB799_000723"
     CDS             complement(2860..3270)
                     /gene="ybeY"
                     /locus_tag="SB799_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEG0867976.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIECFNLPKSLIVRTLEIK"
     gene            complement(3267..3881)
                     /gene="recO"
                     /locus_tag="SB799_000724"
     CDS             complement(3267..3881)
                     /gene="recO"
                     /locus_tag="SB799_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HEG0867977.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNPITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            complement(3881..4402)
                     /locus_tag="SB799_000725"
     CDS             complement(3881..4402)
                     /locus_tag="SB799_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HEG0867978.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            complement(4407..5162)
                     /locus_tag="SB799_000726"
     CDS             complement(4407..5162)
                     /locus_tag="SB799_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEG0867979.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGVIVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            complement(5159..5848)
                     /gene="pfs"
                     /locus_tag="SB799_000727"
     CDS             complement(5159..5848)
                     /gene="pfs"
                     /locus_tag="SB799_000727"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HEG0867980.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KIREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            complement(5845..6765)
                     /gene="fabD"
                     /locus_tag="SB799_000728"
     CDS             complement(5845..6765)
                     /gene="fabD"
                     /locus_tag="SB799_000728"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEG0867981.1"
                     /translation="MKTAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCVKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVISNANAKIYTSKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVI"
     gene            complement(6765..7328)
                     /locus_tag="SB799_000729"
     CDS             complement(6765..7328)
                     /locus_tag="SB799_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEG0867982.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEISENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     CGSGHGHDHHHGHGGGGCCGGGGCGCH"
     gene            complement(7343..8290)
                     /locus_tag="SB799_000730"
     CDS             complement(7343..8290)
                     /locus_tag="SB799_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEG0867983.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            complement(8294..8791)
                     /gene="pal"
                     /locus_tag="SB799_000731"
     CDS             complement(8294..8791)
                     /gene="pal"
                     /locus_tag="SB799_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEG0867984.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            complement(8868..10076)
                     /gene="tolB"
                     /locus_tag="SB799_000732"
     CDS             complement(8868..10076)
                     /gene="tolB"
                     /locus_tag="SB799_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HEG0867985.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVIANATETSNYTFEYALNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGG
                     MVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            complement(10086..10865)
                     /locus_tag="SB799_000733"
     CDS             complement(10086..10865)
                     /locus_tag="SB799_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HEG0867986.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGASSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKND"
     gene            complement(10868..11257)
                     /locus_tag="SB799_000734"
     CDS             complement(10868..11257)
                     /locus_tag="SB799_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HEG0867987.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSAPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            complement(11266..11820)
                     /locus_tag="SB799_000735"
     CDS             complement(11266..11820)
                     /locus_tag="SB799_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEG0867988.1"
                     /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            complement(11820..12209)
                     /locus_tag="SB799_000736"
     CDS             complement(11820..12209)
                     /locus_tag="SB799_000736"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEG0867989.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHATLVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNARMH"
     gene            complement(12213..13610)
                     /gene="atpD"
                     /locus_tag="SB799_000737"
     CDS             complement(12213..13610)
                     /gene="atpD"
                     /locus_tag="SB799_000737"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEG0867990.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            complement(13635..14519)
                     /locus_tag="SB799_000738"
     CDS             complement(13635..14519)
                     /locus_tag="SB799_000738"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEG0867991.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKAVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLEDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            complement(14528..16033)
                     /gene="atpA"
                     /locus_tag="SB799_000739"
     CDS             complement(14528..16033)
                     /gene="atpA"
                     /locus_tag="SB799_000739"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEG0867992.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
     gene            complement(16047..>16337)
                     /locus_tag="SB799_000740"
     CDS             complement(16047..>16337)
                     /locus_tag="SB799_000740"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEG0867993.1"
                     /translation="SRLEYIPQIVKELERQKAFKENIFVGIVYSKEKLSQENLKDLEV
                     KLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKALQNKLNEYILKII"
BASE COUNT         5396 a         2985 c         2110 g         5846 t
ORIGIN      
        1 ttgatggttt aaataaaaac gaatttttta accttagtaa atttaaactc gaaaataaca
       61 atgttttata tttgcaaaat gaaaaaaatc atctcaaaaa cgatgcaaat tatgcctata
      121 gcaaacttaa aaaccttaat gaaatcaaag atgaatttga agaaattgct tttaatactc
      181 ttatagaaaa agctagttat gaacaaatta aaaatgtaaa aatccctaaa aagccttctg
      241 aagttctcac acttatcaag cgttttaaag aaggaaattt agaacttagt gcagcagaat
      301 acgaagtttt actttcacac aatatactaa gcgaaaaaga ctatcttaac gcagcaaaac
      361 taagtactaa acttttaaat cctgatgcta ttttaggaat ttttaacaaa attaaaaatg
      421 aaaaaagcga agctttaaga gcacatttat atcttttagc tgaatttgga cttttagatg
      481 agttaagaga gcaaattcac aatgatgata agaaatttaa tgattttaag gcctttttag
      541 ccttgcgtga aaaaaatatc aaaatcaatc taaaccaact catacaatga tagattttag
      601 caaaaaacct ttatttttag ctcctatggc aggtttttca gatctgcctt ttcgtaatgt
      661 agtaaaaaaa tttggtgctg atattaccat aagcgaaatg ataagttcta atgccttagt
      721 ttatgaaagt tctaaaactc tacatatgct agaaagagct gaattagaaa atccttatat
      781 agtccaaatt gcaggtggag ataaagaagt gctaaaaaaa gcagtgcaaa tgctaaatga
      841 aatggatttt gtagatggga ttgattttaa ttgcggttgc cctgtaaata aagttgttaa
      901 acaatgcgct ggtagtgctt tgctagaaaa tttagagctt tttaaaaatc ttgtaggagt
      961 aattaaagaa aacaataaaa aaagccttac aagtgtgaaa tttcgactag gatttaatga
     1021 aaaatatcct gaaaaaatgg ctaaaatttg tgaaagcttg ggggtggatt ttgtaagcat
     1081 ccacggacgc acaagaaaac agctttatag cggaaaagcc gattatgaat ccattgccag
     1141 tgctaaagag agcgtgaaaa ttcctgtgat tgcaaatggt gatattaacg cacaaaacgc
     1201 taaagaagtt tatgaaatca caaaatgcga tggactcatg atagggcgtg caagcgtggg
     1261 aaatccttgg atattttatg aaatcaaaag cggtaaaagc gtagatgaaa aactcaaaaa
     1321 agaaatcata ctcactcatt ttgatgaaat gataaaacac tacaaagatc aaggcgtaag
     1381 tatatttcgc aagcatttac acgagtattc taaaggctat aaagacgctt cagcctttag
     1441 agatgaagtc aatcgtatcg acaatacaga aaaaatgcga aaaaaaatag aagaattttt
     1501 tagtttaact tgattgattt ttataattta aaaaacctta agccttaata tctatacttt
     1561 ttggtgtaga atttaaagaa aggattttat taaattctcc tgcatcatca tcactaaatt
     1621 tcataccaaa aagaagttct aattctttac tagtgctaaa tttatctttt aataattttt
     1681 ttacaagttc gcttcttgta ttatcatctt tgtaagtttc tttgttttta ctttctgctt
     1741 gtataggttt aaaaggcttt tctttgcctt cttctgaagt ttctttgtta tttgtatttt
     1801 ttaaaggatt gctataatct acaccttttg ccttttctgc ttcttctagt gattttacaa
     1861 actcatcgtg tctttgttta aaatcaagat atttggtttt aaattcttct aggctcatat
     1921 tagaattaat aagcttattg tattcatctc ctaaattctt aatagttttt attagtttat
     1981 catctcctaa atttttagct ctatttatat aattccatat tgataaacta tctcccatag
     2041 gattgcccca gccatcttgc tcgtaggaat attttaaagg atttttattc ataaaggaca
     2101 aaaattcttt tatttcattg ttgtccgtat cgctattaag tccagctaat ttacccagta
     2161 aggttgtttg tcctttaatt gtgctaagat tatttataaa aaacgcaatt aaagcaccac
     2221 ctttagatat tttgttatca tgtatttgat atttattaga acccaaatct gctatatttt
     2281 catcagtaag cttccaaatg aaagcattat cgctttgtaa ttcttgccaa taatttaccc
     2341 catctttttg ggatagattt tttaaatcct gttcttgaaa gctttctcct aatcccttat
     2401 ctttaacaaa agaagaaaaa gagttataag catttcctat tgttttagca atgtctattt
     2461 gagagtaaaa aggttgtctt ttaataaagt tatttacaaa attatttaaa ccatctgcat
     2521 aaatcttata atcttttggc aaacctgctg cttcgttaaa atcacttgta aaaaagccct
     2581 ctttatctac gccatagcct aaaattttat ctaccgcttg tgatttatca cttacaaggt
     2641 tattatttgc tatggcatta gatgattttg tatttgaagt agtattacta aaagtatttg
     2701 tgtaattgta gtttgaataa gaatttatac cattaatcat ttttgccttc cttgtaaatg
     2761 aaatttatta agataaatcg gcaaaaatga ttttttttaa tatttttact catatattta
     2821 aaatataaag cgcaagtctt ctagctcttg aaaaaaatct tacttaattt ccaaagtcct
     2881 tacaatcaaa cttttaggca aattaaaaca ctctataagt tctttctctt tttctctcat
     2941 ttctccatta tcattttcat gatcaaaacc tagtaaatga agcatagcgt ggataaaaag
     3001 caagcttatt tcttcttcat agctatgccc taactcttta gccttctctt ttgccaaatc
     3061 cacattgatc acaacagaac ccaaaggcaa actctcatcg atattttcaa gcggaaaaga
     3121 aagcacatca gtggttttat cttgttttct ttgctctaag ttaatttctt gcatttcttt
     3181 actatccaca aagacaagct ccacatcttt aggacttaaa aaacttgcta tagattctaa
     3241 aaaatcacat ttttcatcac ttaatatcat aaaccttcct taatcaaatg atataaattt
     3301 tctatttctt catcatcaaa aatcgcacaa tttttactgc tataaaattg ttttagtttt
     3361 ttctcttcaa actcaaatcc taaagcacat tgagaatgcg aaggtaaaaa agcccttagt
     3421 aatgtaatgg gattttgaat tttctcatca caggcgaaac aaaaaaaatc tttatgcaat
     3481 cttccttcaa attccaaaat ttttaaataa gcatcaacaa taacacgctt tggattttgt
     3541 ttttcaaacc ttttcacaca ctcatcaagt aaatcaaaat aaaaactatc aagctcttcc
     3601 acatctttta agtgtctata taaaagacgg ataaattctt gccaaataag cattttatcc
     3661 ctttgcataa tccataaaaa tcccaaatgc aatacatctt taagtcttgg taaaaaacta
     3721 ggattttctt ctaaagcaaa gtcgatttta tagccactta aaatactaga atgtctaagt
     3781 ccataaaaac gataagcctt aataagcatt ttaggactta aaatataaac gatcaaatcc
     3841 tcatctttaa ctttttgagt atgaagtata aagccttgca ttaaacaatt tcaataccat
     3901 aagccctaag tatatcaaaa gcggattttt ctaaattttc atcaaaactt gcacttaaat
     3961 tttggtgtaa aattatcctt gcattaggct tagcaccaaa agctaaaatg atattacaaa
     4021 acacacaaat atgagaaaca agccctgcaa aatgaagttc ttcataatcg cttttttgta
     4081 tgaaattagc tagttctaag ctaccaaaag tatttttata aaaaatttta tgagcttttt
     4141 gtaaaaaagg ttcaaattcc tttggcattt gccaacccaa actctcttta atacaatgtt
     4201 ttacaggtaa atttaaacct tctttacttt gtagataatg ctcatcatgc gtatcatagg
     4261 ttaaaagcaa atgcgtgtta ttaaaatcga tttgatttaa ggctttaaga atattttctt
     4321 tgatttttaa agccttatca aaacctaaac ttccatcaat aaaatcattt tgataatcca
     4381 ctaaaacaaa agcttttttc atgcttttat gccttttgaa gccaaaaact ctccgtgtgt
     4441 aaattggcaa aagcggtttt taaacttgta aaaagcttag gatgatcttt ttctaaattt
     4501 gctaaaagct gtttagcttc ttctctagcg tgggggaatt ttacattttt ttcgctgagt
     4561 ttcataccag gacaaaattc atttcctatc acgctaagtt cattttgcgt agcattatcc
     4621 ctaagctgtc tttctcgcac aaaaatcaaa gggcgtatca caattacacc gcgtttgctt
     4681 tgataaatag gcgctaaggt tcttaaagct ccattatgaa taaaattcat aaaaaagctt
     4741 tctgctgcat catctaaatg atgggctata gcaagcttgt taaaaccttt ttcaagagcg
     4801 taagtatata aagctccacg acgcattctc gaaaaataac tacaaaaact tgaattttct
     4861 cttatggtat cacctgaaac ttcataaata tttgaatcaa gcacgctatg tttaatgccg
     4921 tgttcttcac aatgtgcatg aagatgagaa taatcctcgc ccatgccata actcaaagtt
     4981 accgcttcaa gttcaaattt aaaaggagca tgagcttgca tacgatttaa aagatgggct
     5041 aaagccaaag aatctttccc gccgctaagc cctaaaagaa ccctatctcc atctttaata
     5101 agtccaaatt tagcattagc ttgtgcaact tggcgtatga gttttttgct aagatttatc
     5161 ataatttctc gcacatttta agcacaaaat tggctgaaat tttagctgaa ttgatcacaa
     5221 actcatcaaa atcaaattca gccttttccc ctgctttatc actcatagct cttaagataa
     5281 aacaaggcac ctttaaagca tcacaaacca aagccacgct tgcgccttcc atttcacaag
     5341 catccgcatt gaaaatttct ctaatttttg ctttttttgc ttcatcacaa ataaactcat
     5401 cacccgttgc aataatacct gcacgcagtt tgatatttaa ttccttagca acttctaaag
     5461 caagattgtt taatttctca tcggttttga taaaaatttc attacctgga acaaaaccta
     5521 aaggatgtcc aaaagcggta atatcaagat cgtattgagc taattttgtt gcgtaaagca
     5581 aatcgccaat ttcaagttca ggattaaaag cacccgcaac tcctgtaaaa agcaaagctt
     5641 gtgcgccaaa tttttctatc atcacactag cactaagagt agaatttacc tttccgattt
     5701 tagaatacgc taaaacaagt tcatgatttt tatactttgc aaaataataa gtattattag
     5761 cgtgttctat ttttgtataa tctttaagtg tttcaagcaa aggagtgatt tcttcactca
     5821 tggctcctaa aattgctatt ttcatcatat aacctttaaa aattcatcaa tatcattcat
     5881 atttgttaaa gcataagttt cttttgaagt gattttttta ttcaaaccct taagcacgct
     5941 tgcaccaaat tctatgaaat aatctacttc attttcacat gccttaatgc tttgtttata
     6001 aagcacagga gagataagtt gtgcttttaa aagttcaagg gcttcttctt tgcttgtata
     6061 aattttggca tttgcattag aaattacggc tttaaaattt ggttttaaca ccttttcaag
     6121 ctccacacaa agcttagctg aagcattttc caaaagagga caatgacttg ccacgctcat
     6181 atttaaaagc atagctcttt tagctcctgc ttctttaaat acactttcat aacttgctaa
     6241 atcaggtttt aaacctgcta caacgatttg tccatcgcag ttataatttg cagcgaaaat
     6301 ttgcttgttt tctttttgtg ctttttgaca aagctcttca accttttcat catcaagccc
     6361 taaaacaacc atcatacccg cttcaacttt tacacaatct tcttgcataa aaagccctct
     6421 tttattgacc aaagaaagag cctctaaaaa atcaaaagca ccattgacag ctaaggctga
     6481 aaattctccc aaagaatgcc ctaaagcaaa tttcgaactt aaatcaggtt ttttttcaag
     6541 taaaacacta taagccatta aggaatttaa aacgatggcg ggttgagtaa attcactttg
     6601 attgagtttt tcgttttctt caaaaagcaa atgtttaaaa tcaatcttac aaaaatcact
     6661 tgcgttttga aggagttctt tggcttttat agagttttca taaaaatctt ttcccatgcc
     6721 aagactttgt gagccttgac ctggaaatat gaacgcagtc ttcattaatg acaaccgcaa
     6781 ccgccgccac cacagcaacc gccgccaccg tgtccgtgat gatgatcgtg tccatgtccg
     6841 cttccacaac cacaactatg acttcctgca ataatacctg taagaatttc atcttcactt
     6901 gcagctctag catctacgat atttaaagaa aaaagtaaat cacgacccgc ataagggtga
     6961 ttataatcaa ttgtcacatc attttcacta atttctttta cagttacacg aacagtttcg
     7021 ccattttcac cttcgccaaa aagctccata cctaccttta aatcaatacc tgcaaattgc
     7081 tcttttggta aagtttgaac ggcattttca tcgtattcgc ctaaaccttt ttctttttta
     7141 attaccacat cagcattact agggcaatca agcttcatca cttcttcttc taagctttct
     7201 aaaatctgac ctttgcctaa aataaaagaa ataggttgag agtataaatt tgattctaaa
     7261 acttcatttg tatttgcgtc ttttaactca taaaacattg aaactacact atttttttct
     7321 atagccattt tatctcctta atttattttc tattaggtga agcttttgct tcgggtgaat
     7381 ttggataatt agtttttaaa gctttataaa aaccatttgc tgtttttgta tcacctgttt
     7441 tatccaatga aatggcagta tgatataaaa gttttgggaa ataatcccct tttgtactca
     7501 aagaagaact ttttttataa taaacaatag cattgttata atttttttgt ttatactcga
     7561 tctcccctaa ccaaaaattt gctcttgcag gtttatactg ctttgttatg agaaaattta
     7621 attttgcttt ggaatcttca aaagcatttt tatcaacatc ttttatcgct aattctaaaa
     7681 tttcattatt ttttttcttt ttccaagatt catcaatttg ttttgcttta tcatcttggg
     7741 tattttgagt attattgttt tcaatggtac tatttgaatc tgtagttgaa acaacaacac
     7801 taggtgtaat agttttaacg cttaaatttg catcatttaa ttcgttttta gaaacataat
     7861 ttgcattaat agcatctact aaagaactaa gttcggctaa aacttttttt acttgcttat
     7921 tattagcttc ttgaattttt ctactttctt caacataagc ttttaatttt tgaatttcac
     7981 tagtaaaatt attttcaata ttttgattat tctcttcaac ttgacttaat ctagaatttg
     8041 atttagcata ttgagaattt ataccttcta aagtactttg taaaccctcg attctttcgt
     8101 taatttcatt aattctagca tttgtttgta tattttcatt atttaaatta tctaactttt
     8161 ctttaaataa tttttcattt gaagttaaac cataagaaga attgcttgtt atatctcctg
     8221 caccaaaagc tgagctttct gcataaagta aagtagctcc aagaagagct actgtgaata
     8281 tttttttcat taattatctt gataatttaa attcagcacg tctgttttgc gcatcgcaag
     8341 ctttagtttt ttcagtgcac acaggatttg tttctccata gcttttaaca gcaattctat
     8401 cagcatttac acctttagcg attaaagctt cttttacagc ttttgctctt tttaaaccta
     8461 gagcttggtt atattcatca gttccccact catcgcagtt tccttcaaca gtaatactta
     8521 caccgcttac ttcagtgtta aagatattag cattcgtgct tacaacattt tgcatatcag
     8581 gacgaatgtt gaatttatca aaatcaaaat atactttatt taaagtatca ttaagttgag
     8641 aaatttttga atcaatatcc caaccatcac ttccacctga accacgattt gaatcaacac
     8701 tactatcacc gcttacgcta gtgctttttg tgctacaacc actaataaca actgcaagag
     8761 ctgcaattga agtaaaaaga atttttttca tttatgacct ttcaaagtta ataaattctt
     8821 actattatat ctaattttta attaatttta acctaaaatt gaaattttta ccaatcaatt
     8881 gattgaattt ttccaaccct aagaggaaaa taaaaagtct tatttgcatt tacacgaata
     8941 acacctaaag cactttgcgc acctaaatat ttgataaata ctatacttcc accatcacta
     9001 gaaaatcttg gaaataaatt ttttccattt gctgtaagtt gacgaatata atcactatta
     9061 attgacatca aataaatatt aaaaacacct gcttgatttg gttcacgact tgaataaacc
     9121 aaaaaatctt tataagtcga aacagccgaa ttgtttctac catgaaaaac aacttgttca
     9181 gcactattac tatttaaatc ttgcataaaa atattaggat atcccaaacg atcgcttaca
     9241 aataccactt tactatcatc tgagccaata aaatttccat taacatcaat accagaataa
     9301 ttagttaatt gtgttagatt tttggtattt aagtcatata aataaacatc aggctgatct
     9361 tttggagcca tggtaacaag tagtttactt ccatctacac tcacatcact tgctacaacc
     9421 ataccgccac ttgataaaat tttactagct ttattggtat ttaaatcata acggtataaa
     9481 gttggcttat catgatcata agctgtataa taaaatagag tttgttcttt atttccccat
     9541 tttggaaata aattaagccc accatcaaca ataacttttt gataagttaa agtataatca
     9601 gccataataa tttgactttt tttagagcta gaatttctcg cgatcaaaat tttatgatcc
     9661 atccaatcaa caggtgcaag tcctaacgca tttacagaag ctttgacgct tttatgtgcc
     9721 aaaaatggat attgctctaa accatttaaa gtataagttt gctctgactt atcagaaccg
     9781 ccagctttta tttttacatt taaactcaaa gtgttaccat ttttatttaa agcgtattca
     9841 aaagtataat tacttgtctc agttgcatta gcaataactt caaaatttga acttactttc
     9901 aaatcgttca caatgatatt ataaaagctt ttctttaaat tctcatcact taaatttgaa
     9961 ttatctttaa caataatctt tggtaaaact acaccagaat taacaacatc aatcactgga
    10021 tcttctgccc aaagacttcc taaaaagact aaaaaaattg ctacaatttt tttcattttt
    10081 ttctcctaat catttttaac ttttgcttca tctcttaaat tcatggtaat gcttatattt
    10141 ttattttgcg gaggataagt aataaattta cctttttgac tttctaaaaa ttcagccact
    10201 ttagcatcat ataaaggatt cccacttttt tcaactgaag tatagccaaa ttttccattt
    10261 tcatcaataa aaatttttac cttaacagaa attttttcac tatttggata atactgagtc
    10321 catctttgag tgataatacg cacaactttc cctaaaaatt catcataaat tccaatcttt
    10381 tgcgcctttg tgctttcgcc ttgcgttgaa ctttcttctt gaagtaaact atcattaagt
    10441 tgttttacaa gttcggaagc ttgaggtttt ggggcactag aagctcctga tttagcactt
    10501 gattgaattt ttgtagtctt ttcttcttgt atttctttga tatttccaaa aagctcatta
    10561 aaattacttg ccttttggtc aatatcttcg gttttaactg ttttatttgt agtctgagca
    10621 aaaagctttt ctatatcaat ttgctctgtt ggtttttgta tttctttagg agtgttgctc
    10681 tgagtaataa cttgttttga tggttcagca agttcaatat ctacaaaact atcttttata
    10741 tcagtatatt gtatagcagg ttcaacctcg cttacaagtc taaaaaaaac aagaattact
    10801 atactaatat atattgctaa agcaagtaaa aacgaattta aattactcaa accataattt
    10861 ttcatgatta ttcagtctgt aaagcaactt tattaaatcc taaatttttt acacttctta
    10921 agactgaaat aacatcgtca tattttaagc ttttatcagc gcgtataaaa accggatctt
    10981 cggtattaaa ttgtgctttt ctttgagcaa gattgtcagc aaaacttata aaatcgtatt
    11041 tttcttgatt taaaaaaatt tctttttttg cattaatact aataattaaa ctcttaacag
    11101 ttggagcgct agtatttttt tgactacctt gtggaagatt aattttttct tcataagtaa
    11161 tgcttggagc tgttaccatt aaaatcgcaa gcaatacaag cataatatct actaaaggtg
    11221 tgatattaag ctcaggtttt tcatcatcaa atggcatttt taaccttatt tactcgaact
    11281 tataacttta atctcgctat caataatgct taaaagttcg aaagcttttc ttttaatgat
    11341 gagatgaaat gtataagcag gaattgctac taaaatacca caacctgtag caactaaagc
    11401 ctcactgatt ttaggagcta tgatacttaa agaattttga gttccaagcc caccaaaagt
    11461 ttcaagtata gaaataactg tcccaaaaag acctataaaa ggtgaagttg aagcaataat
    11521 actaagccaa gtaagtccag cagaagcgcg gcgacttgct aaatttttat agatttctaa
    11581 atgatttgaa gttgtatcat tgcattttct taaaatcgaa tcagtacgac ttaaatcctt
    11641 ctcacccaag agcaaagttt ctaaactttc tttttcttta tttctccatg tagccaaata
    11701 agtcaatcta gcaaacaaaa tactaaatgc taaaataaaa tataaagaaa gccataataa
    11761 aactatataa gtaataatac ttgaactatt gaaaaaatga aatatagctt caaaattcat
    11821 taatgcatcc ttgcattatc aagttttgaa aaagttgctg ctaaagctgc attatcagaa
    11881 ctcatagatt taatcaaatc ttttgcttga gcaagatttt tttcaatctc actttcatca
    11941 cttccacaaa cccaaaccgc accctttgct aacacgcaaa tcttatcttc atctaccttt
    12001 gcatgtccag catcaatagc aattaattca tgatttaaat cagctttttc aatatcaatt
    12061 actccagatt ttaaagaaga aaccaaagta gcgtgtcctt taagtacgcc aaattctccc
    12121 tcgctacctg gtaaagtaac agattttact tctccttgat agattacacc caaaggcgta
    12181 actatctcga aattaatcaa atcgttcata aattaacctt ttaatttatc cgcttttgca
    12241 atagcttcat ctatatttcc aaccatatag aaagcatttt ctggtaaatg atcatattta
    12301 ccttctaaaa ttcccttaaa tcctgctatt gtatcttcaa ggcttatata ttttcctggg
    12361 ctacctgtga aaacttctgc aacgaaaaat ggttgtgata agaatttttc aatctttctt
    12421 gctctttcaa ctacaagttt atcctcttcg ctaagctcat ccatacctaa aatggcgatg
    12481 atatcttgta aatctttgta tttttgaagc actgattgaa caccacgagc aactttataa
    12541 tgttcttctc caatgatatt tgggtcaagc attcttgaag ttgagtcaag tgggtcaact
    12601 gcaggataaa tacccttttc agcaatagct ctatttaaaa ccgttgtagc atctaagtga
    12661 gcaaaaacag ttgctggagc tgggtcggtt aagtcatcag ctggaacgta aacagcttga
    12721 actgaagtga ttgagccttt tttagttgaa gtaattcttt cttggaattt acccatttca
    12781 cttgctaagg ttggttgata acccacagct gatggaattc ttcctaaaag tgctgacatt
    12841 tcagaacctg attgtgaaaa tctaaagata ttatcaataa acataagcac atcaagaccc
    12901 atttcatctc taaaatactc agccattgtt aaacctgtta aagcaatacg atttcttgcc
    12961 cctggtggtt cattcatttg tccataacat agagcaactt tgtctaaaac attgctttct
    13021 ttcatttcat tataaaggtc atttccttca cgagttctct cacccacacc tgcaaataca
    13081 gaatagccac tatgcttaaa tgcaacattg tgaataagct ccataataat aacagtttta
    13141 ccaacacctg caccaccaaa aagacctact ttaccacctt ttgcataagg agcaagtaaa
    13201 tccacaactt taatccctgt ttcaaaaatc tcactttttg tgctttgatc ttcaaaagct
    13261 ggcggatctc tatgaattgc ccatttttta tcaaaagaaa tttcttcacc ttcatcgatc
    13321 aaatctccag taacattgaa aattcttcct aaaactttct caccaacagg aacactaata
    13381 ggagcaccta aagcctcagc ttttaagccc cttaccaaac catctgtcat atccatagca
    13441 atagttctaa ctctattatc tcctaaatga gctgctactt ctaaaacaag tttatgtttt
    13501 tttccttcgc tttcaaaatt tacaacaatt gcttcattaa tttgaggtaa atagtcgtta
    13561 aaatctacat caacaaccgg acctaatacc tgtgaaataa atccttgcat tatttatctt
    13621 ctccttaaaa tttactattt cattgattca acaccactga taatttctat aagctcagta
    13681 gtaatggatt cttgtcttgc tttattataa gctaaattta gttgtttcac tcttgccttt
    13741 gcgttattag ttgcattatc catagcttgc attcttgcac tatgctctgc cgccaaagaa
    13801 tcgattaatg cataatacat attatactcg aaatatgttt tcattaaatc ttctaaaagc
    13861 tcagttcctt ctggttcaag ctctaaaaga gaattatgag tctgttcaat actctttggt
    13921 tcaactggaa taagatgatt aattttaagt tcttgggtaa tcatattttt ataaccatta
    13981 tgaactaaaa tcacttcatc tgtatttcca tttaaaaaat catctacagc agcatgaatt
    14041 acttcacatg ctttctcata gtcaggacta gaactaagat ggaaatattt ctctaacaat
    14101 tctatttttt gaaaattaaa atattcaatc ccagttttac ctatagctct aagacgaata
    14161 ttaatatttt ttgcttcata ttcttttagc atttcactta ctgcttttaa agtcttaata
    14221 ttaaaaccac cgcataagcc tttatctgca gtgataaata ttaaatctac agttttaatt
    14281 tgttcttttt tatgaaacaa agataaacgc acatcatctt cattgtgaac aattttattg
    14341 atctgaaatg aaatttcact caaaatttca tcgatttttt gtgcataaat ttttgatctt
    14401 ttagctgctt cttctgcttt ttttaactta gcagtagaaa ctagcttcat agcatttgta
    14461 gtcttttgag tgttatgaac acttttaatt tttcttttaa tttcttttaa attagacata
    14521 aaagacctta taaatgattt gctttaaact cattaatggc tttagctagt ttttcttcca
    14581 aatcagaatc taaagctttt ttagagcgaa tttgctcaaa aatatctgga tgttttgcct
    14641 caataaaagg ataaattcca tcttcaaatt ccttaattct agaaacagca atatcatcta
    14701 agaaaccttt ggttcctgca aaaattaaaa ctacttgttt ttcaacgcta agcggagaat
    14761 aaggtggttg ttttaagagt tcaaccattc tttgtccacg ttcaagttgt tttctacttg
    14821 cctcatctaa atcactagca aattgtgcaa aagcttgaag ctctctatat tgagcaaggt
    14881 caagtcttaa tgtgcctgaa acttgttttg tagctttaat ttgagcagcc ccacctacac
    14941 gagatactga taaaccaaca ttaattgcag gacgaattcc tgagttaaat aaatcagttt
    15001 ctaagaaaat ttgtccatct gtaattgaaa taacattagt tggaatataa gcagaaacat
    15061 ctcctgcttg tgtttcaatt atcggcaatg ccgtcaaaga accagcacct aattcatcat
    15121 ttagcttgct tgctctttca agcaatcttg aatgaaggta aaaaacatcg cctggataag
    15181 cttcacgacc tggaggacga cgtaaaatca aagacatttc gcgataagct acagcatgct
    15241 tgctcaaatc atcataaaca attaaagcat gttttgcgtt gtctctaaaa aattcaccca
    15301 tggttacacc agtatatgga gctaagtact gtaaagccgc aggatctgaa gcaccagcat
    15361 ttacaacaat agtatattcc atagcaccat gttcttctag tcttttaacc acttgtgcca
    15421 ctgtactttg cttttgacca attgcaacat atatacagat aactccttga cctctttgag
    15481 atataatagt atcaacagca acagtagttt tacctgtttg tctatcacct atgataagct
    15541 ctctttgacc acgaccaatt ggcacaagcg catcaatagc tttaattcct gtatgtaaag
    15601 gctcatgaac actttttctc gccataatac cttttgcttt ttcttcaaca aaacgatatt
    15661 cattagcatt gatcacacct ttagcatcaa ttggctcacc taaagcattt acaacacgac
    15721 caatcaaagc ctcacctact ggaactttaa gtaatttctt aagtcttttt acagaagcac
    15781 cttcttttaa accttctcct tttccaagta taacaatacc tacactcgac tcttcaaggt
    15841 ttaaggccat tcctttatca ccattttcaa attctaccat ttctccagcc ataatattct
    15901 taagtccata taccttagca acaccatcag ctacagaaat aatctttcct gtttcttcaa
    15961 tttcaagatt taaatcaaaa ttttcaattc tttctttgat tattgaactg atctcatcag
    16021 ctttaaattt catttacttt ttctccttag ataattttca atatatattc gtttagctta
    16081 ttttgaagag ctttcataga aaaagaaagt tcataaccta attcttctaa ttctatttta
    16141 acactatcat cttgactgat tttattattt agtttaatat ttgcatcaaa ttttttgtta
    16201 agtttgactt caagatcttt aagattttct tgacttaatt tttctttaga atatacaata
    16261 ccaacaaaaa tattttcttt aaaagctttt tgtctttcaa gttctttaac tatttgagga
    16321 atgtattcta atcttga
//
LOCUS       DARBAC010000031        16182 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.031, whole genome shotgun sequence.
ACCESSION   DARBAC010000031 DARBAC010000000
VERSION     DARBAC010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16182)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16182)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16182
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.031"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            78..839
                     /locus_tag="SB799_000741"
     CDS             78..839
                     /locus_tag="SB799_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEG0867994.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEVLLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLTDGLKLDLLSEIYVSRAALKLKNFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGNNQLHLSLRTNEKIILHENTDLRAFKSEEKFELIT
                     CDVSFISLINLLYYIDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKECAKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            805..1659
                     /locus_tag="SB799_000742"
     CDS             805..1659
                     /locus_tag="SB799_000742"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEG0867995.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKCLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGKDFLSFLKKEFVNLKFIVVGYDF
                     SFGKNRAYNAKDIEFLSGIKTIIVDEFSIGGIGVHASLIKDFLSKANLQKAKEFLGRD
                     YSIKGKMIKGQGLGSKELFATINLDCKGYFLPQNGVYATLLKSQRKIYKSVSFLGIRS
                     SDENFAIESHILEELGEKFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQAKE
                     LLRKNDER"
     gene            1646..2356
                     /gene="cmoA"
                     /locus_tag="SB799_000743"
     CDS             1646..2356
                     /gene="cmoA"
                     /locus_tag="SB799_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HEG0867996.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPINASICDLGCSSANFLIFLANLRKDFKLFGVDNSASMVEVAKSKAKAYGL
                     DISFFETNLCEFDFFVCDVFVANYTMQFIRPPKRQELLDKIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(2346..2567)
                     /locus_tag="SB799_000744"
     CDS             complement(2346..2567)
                     /locus_tag="SB799_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEG0867997.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYRVGFPKDEWEDENISNP"
     gene            complement(2558..2998)
                     /locus_tag="SB799_000745"
     CDS             complement(2558..2998)
                     /locus_tag="SB799_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HEG0867998.1"
                     /translation="MRRLSILLTILIVINITACDSKTENYYKNHPSEAKEKAKECKES
                     GTLSEDCINALKVGVKPTNEESKYSPNTPKKSDNQILEALKQNDLKKEKTTKDINQSS
                     ENNESIIIPPITETPSEIYPSKTTENNQSSIFSDDVNITQEKLP"
     gene            complement(3057..3689)
                     /locus_tag="SB799_000746"
     CDS             complement(3057..3689)
                     /locus_tag="SB799_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HEG0867999.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK"
     gene            complement(3700..4350)
                     /locus_tag="SB799_000747"
     CDS             complement(3700..4350)
                     /locus_tag="SB799_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEG0868000.1"
                     /translation="MKIFIFLLAISLNIFALESYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDKQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERNLAFKFQSIEVLN
                     LVLYDKEPLYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF"
     gene            complement(4347..4973)
                     /gene="nth"
                     /locus_tag="SB799_000748"
     CDS             complement(4347..4973)
                     /gene="nth"
                     /locus_tag="SB799_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEG0868001.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLEEEKLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTGIFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            5054..5875
                     /gene="peb4"
                     /locus_tag="SB799_000749"
     CDS             5054..5875
                     /gene="peb4"
                     /locus_tag="SB799_000749"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HEG0868002.1"
                     /translation="MKKFSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGSKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            5875..6939
                     /gene="fbaA"
                     /locus_tag="SB799_000750"
     CDS             5875..6939
                     /gene="fbaA"
                     /locus_tag="SB799_000750"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEG0868003.1"
                     /translation="MGVLDIVKAGVISGDELNKVYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKFD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKDAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMVKRLEIAFEDLNCINKN"
     gene            7034..8476
                     /locus_tag="SB799_000751"
     CDS             7034..8476
                     /locus_tag="SB799_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEG0868004.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKVERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            8473..9426
                     /locus_tag="SB799_000752"
     CDS             8473..9426
                     /locus_tag="SB799_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEG0868005.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNLTLDNKDKQILILLGQLEKKDEEFKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            9413..10288
                     /locus_tag="SB799_000753"
     CDS             9413..10288
                     /locus_tag="SB799_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HEG0868006.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFISYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYALALE
                     NGVDFVENIHSLSLKQFAFSLCKKDDIFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKLV"
     gene            complement(10280..11623)
                     /locus_tag="SB799_000754"
     CDS             complement(10280..11623)
                     /locus_tag="SB799_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0868007.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(11674..12342)
                     /locus_tag="SB799_000755"
     CDS             complement(11674..12342)
                     /locus_tag="SB799_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEG0868008.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGILDDQIAD
                     KIHHGGYHKAIFANSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDIHQIS
                     NAILQVSEPRKPCVKISKIHNNSNFTHEIFKTGLSGWYYKVLQVGQIRKYENIKILEK
                     NSTSLSVFELNQLFYSPHQALRQNPILLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            complement(12339..14042)
                     /locus_tag="SB799_000756"
     CDS             complement(12339..14042)
                     /locus_tag="SB799_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEG0868009.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLEHFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKTQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVLGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTI
                     SASKSALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKM
                     QNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKLE
                     P"
     gene            14137..15018
                     /gene="ppk2"
                     /locus_tag="SB799_000757"
     CDS             14137..15018
                     /gene="ppk2"
                     /locus_tag="SB799_000757"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEG0868010.1"
                     /translation="MQENNSPKTQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLK
                     FQNHVKAKGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYF
                     QRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII
                     FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEAN
                     LEKLDSKKADEKIKDLD"
     gene            15027..>16182
                     /locus_tag="SB799_000758"
     CDS             15027..>16182
                     /locus_tag="SB799_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0868011.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILATIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGSLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMAT
                     QFVNNIQSVVSRRLAPYEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDEKAALIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQG"
BASE COUNT         5891 a         2066 c         2763 g         5462 t
ORIGIN      
        1 aatgcttttg aaataggcat ttggtggttt tctaaagaaa aagaagactt ggaaaaaaga
       61 ataaatgaga gtttaaaatg agatttgatt tttttgtttc aaagcgttta aatatcagta
      121 gaaataaagc tttagagctt atagaaaatg aagaggtttt gcttaatggt aaaagtttta
      181 aagcttcttt tgatgtgaaa aattttttag aaaatttaaa aaaaacgcaa gatttaaatc
      241 ctgaagatat acttttaact gatgggttaa aattggatct tttaagtgaa atttatgttt
      301 caagggcggc tttaaaatta aaaaattttt tagaagaaaa tgatattgaa ataaaacata
      361 aaaattgtct tgatatagga tctagtacgg gtggttttgt gcaaatttta cttgaaaatc
      421 aggctttaaa aatcactgct cttgatgtag gtaacaatca actccatcta agtttaagaa
      481 caaatgaaaa aattatcttg catgaaaata cagatctcag agcctttaaa agtgaagaaa
      541 aatttgaact tattacttgt gatgtgagtt ttatttctct tattaattta ctttattata
      601 tcgataattt agctttaaag gaaattatct tactttttaa gcctcagttt gaagtaggga
      661 aaaatatcaa aagagataaa aagggtgttt taaaagatga taaggcaatc ttaaaggcaa
      721 gaatggattt tgaaaaagaa tgtgctaaat tgggttggct tttaaaaaat acgcaaaaat
      781 caagcattaa aggaaaggaa ggtaatgttg aatattttta ctactatatc aaaaattaat
      841 attacttctt tagccatagg ttgttttgat ggtatgcatt taggacatct aaagcttgta
      901 aaatgtttag atgagaatgg ggctttgtta gttattaata aatttaaggg tcaatttctt
      961 tgttcaaatc gtcaaaaaga agaaatttca ggaaaaaaag ttatagaagt ggattttgaa
     1021 agtataaaat ctttagatgg taaagatttt ttaagctttt tgaaaaaaga atttgtcaat
     1081 ttgaaattta tagtagtggg atatgatttt tctttcggga aaaatagggc ttataatgct
     1141 aaagatattg agtttttaag tgggataaaa actataatag ttgatgaatt tagcataggc
     1201 ggaataggtg ttcatgcaag tttaattaag gattttttat caaaagcaaa tttgcaaaaa
     1261 gcaaaagaat ttttaggaag agattatagt atcaaaggga agatgattaa aggacaaggt
     1321 ttgggctcta aagaactttt tgcgactata aatttagatt gtaaaggtta ttttttacct
     1381 caaaatggtg tttatgctac tttgttaaaa agtcaaagaa aaatttataa aagtgtgagt
     1441 tttttaggta taaggtcaag cgatgaaaat tttgctatag aaagtcatat tttagaagaa
     1501 ttgggtgaaa aattcacaca aggggagttt ttcgaactcg agtttatatc ttttctaaga
     1561 gagaatcaaa aatttcaaga tctaaaaaaa cttaaaaatc aaattgccaa agacatagag
     1621 caagctaaag aattattaag gaaaaatgat gaaagatgaa ctttttaaac aaagccctaa
     1681 aaaacaattt gaatttgata aaagcgtggc tagtgttttt gatgatatga tcaatcgttc
     1741 tgtgccattt tatagagaaa atttagaact ttgtggcaat ttattggcta aaattttacc
     1801 tataaacgca agtatttgtg atttgggctg ctcaagtgct aattttttga tttttttggc
     1861 aaatctaaga aaggatttta aactttttgg cgtggataat tctgcttcta tggttgaagt
     1921 tgcaaagtca aaagctaaag cttatgggct tgatataagt ttttttgaaa ctaatttatg
     1981 tgaatttgat ttttttgttt gcgatgtttt tgtggcaaat tataccatgc agtttattcg
     2041 ccctcctaaa agacaagaat tacttgataa aatttataaa aatttaaact ctaaaggcat
     2101 tttgattatg agtgaaaaaa tcctttatga agatgctttt ttgtctaaaa atatcataga
     2161 actttatgca gattataaag aaaaacaagg ttattctaaa tttgaaattg cagccaaaag
     2221 agaagcttta gaaaatgttt taattcctta tagtcaaaaa gaaaatttaa acatgctaga
     2281 aaaggcaggt tttaagaaaa tagaaagtat ttttaaatgg gcaaattttg aaactttcat
     2341 agcttttaag gattagaaat attttcatct tcccattcat cttttggaaa acctacccta
     2401 tacgcattaa cacaatcttg actgatgata gctttgtgtc tgcattctaa acttcttttt
     2461 tttgcttctt cggggtgatt ttgataatat tctacacttt tggtttgttc gcatgctgca
     2521 aaaaatatac caataaggct taaaaaaaga gttattttca tggtaatttt tcctgtgtta
     2581 tattaacatc atcgctaaag atagaacttt gattgttttc tgttgttttg gaaggataaa
     2641 tttcagaagg tgtttctgtt ataggtggta ttataatact ttcattattt tctgaacttt
     2701 ggttaatatc ttttgtggtt ttttcttttt ttaaatcatt ttgttttaaa gcttctaata
     2761 tctgattatc agattttttt ggtgtgtttg gactgtattt actctcttca tttgttggct
     2821 taacaccaac ttttaatgca ttaatacaat cttcgctaag agttccgctt tctttgcatt
     2881 ctttcgcttt ttcttttgct tcactaggat gatttttgta gtaattttct gttttgctat
     2941 cgcaagctgt tatattaata actattaaaa tcgtaagtaa aatacttagt cttcgcattt
     3001 atcaatctcc taaaattttt taatatctta gcaaacttgt ataaagcaac gataaattat
     3061 ttttcttcat tgtaagaaaa aataggtaaa gaccattgat atttgatagc taaaagcctt
     3121 gcaaaaactc ctataaaaag agttaaaagt gtgcaaacta gagcattaag ctcaagccaa
     3181 attattagag aataatagat tgctcctgca attatggcaa ttcctgcata aatttctttt
     3241 tgaaacacca aggggattct catacataaa atatctctta aaattccacc aaaaacaccg
     3301 gtgattacag cagcagcaac ggctatgata aagccatggt tttgatctat ggctatttga
     3361 gctccaagta tgctaaaaac aacaagtcct atagcatcaa gagttagaaa taaagtttca
     3421 agtttggtta ctacgcgcgg aatttttgtg gctacaaggg cgcaaaaaca gattaaaata
     3481 atatattcag gatgtttaac ccaagttaaa ggataatgtc ctaaaagcac atctcttatg
     3541 cttccgcctc caattgctgt tacgagagca ataaaaataa ctccaaaaag atccatttta
     3601 tggcgtcctg cagctaaagc ccctgtcatt ccttctgcgg aaatacctat gatataaaga
     3661 gtggttatcg taagagcatt tatctccata atttatacct taaaatttat cacaatttat
     3721 ttgatactgt ttaatatttt catcatttac ttcatggttt ggtacttgat agcattcttt
     3781 aaatttcgga gttttaataa tttttacata aaaacttggt atagcaatac ggtttttaat
     3841 gtatagtggt tctttatcgt aaagtactaa atttaaaact tcgatacttt gaaatttgaa
     3901 agccaaattt ctttctcttt gctcgatttc attccaaatt ttattattta tttgtgcaat
     3961 ttgtggggta atattgctca ttaaaaatac tgaattttga gcagctttac taaagctaaa
     4021 agaagcatta ggcgcagtgt gtcctcgtgt gtaaccactg tttttataat cactccaagt
     4081 agtgcggtat tttttaggaa tatttgtatc atcttcaaag cgagggcgtt ttttgatttg
     4141 tttatctttt aaatttgaag cttctacttt ataagcaacg gcttttgtgc ctttgagttt
     4201 ataatcatag caatttagat aaaaaaactt atctaagatt tgcgagcaat ttatattgtt
     4261 aaaataagaa gaaaaatcag cactaggttt gtaagattct aaggcaaaaa tattaagaga
     4321 tatagcgagt aaaaagatga aaattttcat ttaagttcct tatctttact tttgcaaaga
     4381 tgatttaaaa aacattcttt acataaaggt tttttagctt tacaggtgta gcgtccaaaa
     4441 agaaccatgg cttgatgaag atagttaaga ttgtctttaa atatgcctgt taaatcttct
     4501 tctgtagctt ctggagtttt tgctttgcta agtcctaagc ggtgagaaac tctaaaaaca
     4561 tgagtatcta cagccatgaa atttgctccg caccattcta ttaaaactac atgagcggtt
     4621 ttttgtccta cgcctgccaa ggattttaat ttctcttctt caaggggaat ttctccgtca
     4681 aaattttcac aaactgcttt tgccattttt ataagatttt gtgctttatt attaaaaaat
     4741 gaacaagttt gtatataggt tttaagactt gataagtttg catttgcaag ggatttgata
     4801 tcaggataag ctttaaaaag atcaggagtg atgaggttaa ctcttttatc agtgcattgg
     4861 gctgaaagca tcacgcagac taaaagctca tataaatttg aaaatttaag ctctgttaca
     4921 ggcttgtcaa aatgttttaa aaaaagttct ttgatttcta aatttctttt cattttttaa
     4981 ttttagttaa ttagctttaa accaagttta gatataattg attttatata cattttatta
     5041 aaaaggaaac ctaatgaaaa aattttcttt agtcgcagca gctttgattg caggtgtagc
     5101 tttaaatgta aatgcagcta cagtagccac tgttaatggc aagagcatta gtgatacaga
     5161 agtaagtgaa ttttttgccc ctatgcttag aggacaggat tttaaaactt tgccggataa
     5221 tcaaaaaaaa gctcttattc agcaatatat tatgcaagat ttaattttgc aagatgctaa
     5281 aaaacaaaat ttagaaaaag atcctttata tacaaaagaa cttgatcgtg caaaagatgc
     5341 aatacttgtt aatgtttatc aagagaaaat tttaaatact attaaaattg atgcggctaa
     5401 agttaaagct ttttatgatc aaaataaaga caaatatgta aaacctgcaa gagtgcaagc
     5461 aaaacatatc ttagtagcga cagaaaaaga agctaaggat attattaacg aacttaaagg
     5521 ttcaaaaggt aaagaactag atgctaaatt tagcgagctt gctaaagaga aatcaattga
     5581 tccaggttca aaaaaccaag gtggtgagct tggttggttt gatcaatcaa ctatggtaaa
     5641 gccttttaca gatgctgctt tcgcacttaa aaatggtact attactacaa ctccagtaaa
     5701 aacgaatttt ggttatcatg taatcttaaa agaaaattcg caggctaaag gtcaaatcaa
     5761 atttgatgaa gtaaaacaag gtattgaaaa cggacttaaa tttgaagaat ttaaaaaagt
     5821 tatcaatcaa aaaggccaag atcttttaaa tagtgctaaa gtggaatata aataatgggt
     5881 gttttagaca ttgtaaaagc aggggtgatt agcggagatg agcttaataa agtttatgac
     5941 tatgctaaag cagagggttt tgctatccct gctgttaatg ttgtaggaac tgattctatt
     6001 aatgcagttt tagaagctgc aaaaaaagtt aactctccag ttattatcca gttttcaaat
     6061 ggtggggcaa aattttatgc agggaaaaat tgtcctaatg gagaagtttt aggtgcaatt
     6121 agtggggcta aacatgtgca tttacttgct aaagcttatg gtgtacctgt gattttacac
     6181 actgatcatg ctgcaagaaa acttttgcct tggattgatg ggcttattga ggcaaatgca
     6241 caatataaaa aaacccatgg acaagcttta tttagttctc atatgcttga tcttagcgaa
     6301 gaaagtttag aagaaaatct tagcacttgt gaagtttatc ttcaaaaatt tgatgcttta
     6361 ggtgtcgcgc ttgaaataga actaggttgt acaggtggcg aagaagatgg agtggataat
     6421 acaggtattg ataattccaa gctttatacc caaccagaag atgtagcact tgcatatgaa
     6481 agacttggaa aaattagtga taaattttca attgcagcaa gttttggaaa tgtacatgga
     6541 gtttacaagc caggaaatgt tagtttacaa cctgaaattt taaaaaattc gcaaaaattt
     6601 gtaaaagata aatttgcttt aaatagcgat aagcctataa attttgtatt tcatggtggt
     6661 agcggtagcg agctaaaaga tattaaagat gcagtaagct atggcgtaat taagatgaat
     6721 attgacacag atacccagtg ggctttttgg gatggggtgc gtgaatatga acttaaaaat
     6781 agggcttatt tgcaaggaca aattggaaat ccagaaggtg atgacaagcc aaataaaaaa
     6841 tactatgatc cgcgtgtttg gttaagaagc ggtgaagaaa gtatggtaaa gcgtcttgaa
     6901 attgcttttg aagatttaaa ctgtataaac aaaaactaag cattttaaag gcttagtttt
     6961 attttgtttt aaaaattttt atcaaattga gtagcaatct ttaaaataaa atttttaatg
     7021 aggtattggt ttcatggata ttaaatcaga tgaaatttca gaacttgttt tgcctgaagg
     7081 caaagacgca agaggttctt tggtttattt taaaattatt tttattccag cttttcttta
     7141 tattttgatt ttattgggtt attttaatgt aattgacttt aaggttgaat tgcatacggt
     7201 tattatgaca ggtgtgattt tttttacagc attgattttt gctagacata gtgctgagta
     7261 tgcgtatagt atttttgaac aacaaaaaga tgaatttaaa caggctttaa aaagacatat
     7321 tatgaggcat tttcttgcca tagggaaaga cacgaaatca aatgccaatt ttgatgactt
     7381 tgcttataca tatattaaag gtgcaagaaa tgagaatttt gctagtatag gttcggcaat
     7441 ttttccaatg atgggaattt taggaacttt tatcagcata gctttttcaa tgccaaattt
     7501 tagctctagt gatacagccg ctttagaaca agaaattgca gatttgttaa gcggagtagg
     7561 aactgctttt tatgtttcaa tttatggaat ttttcttgca ttatggtgga tgttttttga
     7621 aaaatatggt aaaagtaaaa tagatcgttt gttaaatcgt caaaaaaacg ctacaagtgg
     7681 atttttttgg acaaaagaag agcttgatca aagatattta accgagagtt tgcaacattt
     7741 tgaaaaaatt ggagcaattt ttaaacaagt tagtaatgat gatttttttg cagagcttga
     7801 tcatgctatt gatagaaaat ttggtatttt ccaagatatg ctaaatgtag aagaaaaggc
     7861 tattagatta agtagtgaac acatcaaaca aaccatgggt gagcttagta aagcacaaag
     7921 agatcaacgc gatcttggaa agctttatag tgaaatgtta aatggtatag gtttactcaa
     7981 tcaaaattta aaagaaatca atacaagaat gtcagaacaa tataatcgct tgctcgatat
     8041 cagtagtgat aaaattcatc atcttgataa gacgctaagt gcattcgatg aaaaagtaga
     8101 gcgttttggt aaaaattttg aactttatga aaaagcaatg ttggaaagtc aagaaaaggt
     8161 ttttgaagga tttaaagcaa gcttgtttga aggtatgcat aaatttaaag aagtatatga
     8221 agaagaaaaa agtatcgatg ctaaaatcaa aatgatggat gagcttaaaa aagaaatgaa
     8281 agcacttgat gaagaaacaa gtcaaatgat gagcaagctt tctggagatg aaaatcagaa
     8341 taaagaaaat gaaaccaaac aaatagaaga tttttcagag tctaagactg aagaaaatca
     8401 agatgaaatt caagcagaaa tatctaagca agaaagcaat gatgagctaa aaaatgaaga
     8461 taaagaaaat aaatgaaaaa tgagtcaaaa gaagatagca atttttggat agcttatgct
     8521 gatttaatgg caggattgct gtttgttttt attttgctaa taggtgctat tgttgtaaaa
     8581 tatgttttaa ctcaaagtga tttaaaagaa atcaaagata atctcaataa acaagaggca
     8641 cgcttagagg agagcaaaga agagcttaga aataaagaag ccatagtgtt taaactaagt
     8701 tctgatttaa acaatgcttc tagtgcttta aatcttgcta attctcaaaa agcagaatta
     8761 gaggctaata ttacaaatta caagcagtta agcaaagatt taaacttaac tttagataat
     8821 aaagataagc aaattttgat tttactaggt caactagaga aaaaagatga agagtttaaa
     8881 aatttacaag aagattttca aaaagctaaa gaaaaggtgc aaaatcttgg tttgattcgt
     8941 gaaaatttaa gcaaggaatt acaaagtaag cttgataata atatcactat agatgaaaag
     9001 acaggatcta tttctttgcc tgctgaagta ctttttgata aagattctta tgtgttaaaa
     9061 aatgaggcaa aggcaagttt gagaaaaatc ttaagcgaat attttgatgc tattcttgaa
     9121 gatccaaaaa ttttttccaa cattgaaaat atcattattg aaggacatac tgatagtgat
     9181 ggatcttata tttataattt agatttgtcg caaaaaagag cttatgaggt gatgaatttt
     9241 atctatactt tttataagag cgataaactt caaaagcttt taatggcaag tggacgttct
     9301 ttttcagatc ctgtgtttgt caatggagtt gaagataagg ataagagtcg tcgcatagaa
     9361 ataaaattta gcattaaaaa tgataatgct ttaaaggatg tagaaaaatt ctttgaattt
     9421 cattaaaaca attagtccta tacaaaaaat caattttaac ggatttgaat tttatattaa
     9481 aagagatgat ttattaggag aaattaatgg aaataaagct aggaaacttg ctttttatat
     9541 ccatcaaaga tatcctaaaa atcaatcttt tataagttat ggaggaagcc aaagtaatgc
     9601 tttggcggca ttaagtattt ttgctaaaca aagatcatat aagcttgttt ttgcttgtga
     9661 aaaaatttct acttttctta agaataatcc ttgtggaaac tatgctttag ctttagaaaa
     9721 tggtgttgat tttgtagaaa atatccattc tttatcctta aagcaatttg ctttttcttt
     9781 gtgtaaaaaa gatgatattt ttatagaaca aggcatagct aatttagaag ctcaatatgg
     9841 ctatatggaa cttgctcaag aaattcaaat gcaaagtcaa agtttaaagc ttgattttga
     9901 tattttttta ccttcgggta caggcacttc ggcagctttt ttggcaaagt attctaaatt
     9961 taaagtattt acttgcgctt gtgtaggtga tattaaatat cttaaaaaac aaattttaac
    10021 attagatcca agctatgatt tttcaaattt agaattttta acaagtgata aaaaatatca
    10081 ctttgctaag ccgtataaag aattttatga gctttatatg gatttaaagt taaagtgcaa
    10141 tatagaattt gacttgttgt atgatatttt aggattaagt atagcattaa aacaagagtg
    10201 gaaaaaacca ttgctttata tacatcaagg tggaatttta ggaaattcca ctatgttaga
    10261 gagatataaa tttaaaaaat tagtttaaaa ttccatagat aaaaatgatt aaaataatca
    10321 aaggtactat atattttaca taataaaacc aaattccaaa ccatgaactt ttaagtgtat
    10381 tgttattgct aagttctttt agactttctt gtttgcctaa gatccaacct acgtaaatgc
    10441 agcaaaaaaa tgcagttaaa acaaacaaaa tatttccact aatgaaatca aaactatcaa
    10501 aaatgttttt tcctttgatg ataacaatat cacgccaagg cccataagtt agaatacaag
    10561 gaagattacc aagtatgaag ataaatccta gagttaggtt aatagaaaga tttttagaat
    10621 atttaaattt ttcttctaat acactaataa taacttgata aattggtaag cttgtggtta
    10681 aagctgcaat caagagtaag acaaaaaata aaatacacac aatggtgcca aaatggatat
    10741 gagaaaatgc tataggtaaa gtttcaaaaa ccaaagaagg cccgctatct ggagcaagtc
    10801 ccgctgagaa aagtgctgga aaaatcataa aaccagccaa aacagctatg atagtattta
    10861 aaacccctgt ataaatagcg gtttttgcca tattttcatt tttattaaga tgagatgaaa
    10921 gtgttatcat taccccaaaa cctagggata aagcaaaaaa gacttgtcct aaaacatcga
    10981 ttaaaagttt tggtgataaa attttactaa aatcaggttc aagataaaat ttaactccag
    11041 ccatagctcc atcaagggtt aaattgcgtc ctacaacaat aataagacag ataaataaca
    11101 aaggcattaa aaattttacg gatttttcta taccatctat aatgcctctt tttaaaataa
    11161 tataattaat aattacaaaa acagtggtaa aaataccaac tcctaaagga ttgaaggcta
    11221 ttttgtcgtt aaaaaactga tgagtaaatt ctttgcttac tacattagca agactaaaat
    11281 tccctagggt taattcccaa atataaacta aaacccatcc tccaagtacc atgtagtaag
    11341 ccattatgcc aaagcttcct aaaagtccca tatatccaat actttgccat ttttgtttga
    11401 aagcatctac gctatttgtc atcgcttttc tgcctatgac attttcaact aaaataacag
    11461 gaatgcctat gataatcata gctatacaaa aaactaatac ataagcaccg ccaccatttt
    11521 ctcctacaag atagggaaaa cgccaagttg ctccaaatcc tatggttgct ccagcaactg
    11581 ttagaatata agttagtgtg ctactccatg tttgtctttg catgattatc ctttcgaaaa
    11641 agaattattt tacctaaaaa taactttaaa aacttataag ctatccatat agcttatatc
    11701 gtaagtattt tttaagcgtt tgtgtatcgt ttcgtgccaa ttttgagata tgagagagtt
    11761 taatttttct aatttatcta ataaaatcgg attttgtcta agagcttgat gtggggagta
    11821 aaaaagttga ttgagttcaa atacactaag tgaagtagaa tttttttcta aaattttaat
    11881 attttcatac tttcgtattt gtccaacttg taaaacttta taataccatc cactcaagcc
    11941 cgttttaaaa atttcatgtg taaaatttga attattgtga attttagaaa tttttacaca
    12001 aggttttcta ggttcgctta cttgcagtat tgcatttgaa atttgatgta tatcacctat
    12061 gcaaacattt tgttcacaaa gcccatcgat gctcaaattt tcacccattg agccaaaatt
    12121 tagcttttta ttaagaaatc tttcccatat aggatagttt tgacaagagt tggcaaaaat
    12181 agccttatgg tagcctccat gatgaatttt atcagctatt tgatcatcta aaatacctag
    12241 aaaatcaatt tgtgtttctt ctaggtaagt atctttaata aatgcgcttt ggaaattttt
    12301 atagttttta attttcccta tttgcaaact ttgaattttc atggttctag tttttttaat
    12361 aaatcatcag cactgataaa acccgtgatt tttaattttt cttttccatt ttcaaagaaa
    12421 attaaaacag gtgggccaaa aacattaaat tctttcatgg ttttaatttg ttcattatta
    12481 ttttcgctta catcaacttt gataagtttg taattttgca ttttttgtat gattctttca
    12541 tcgctaaagg ttaattcatc taaaagtttg caattttcac accaagatgc agtaaaatca
    12601 agcattatgg gctttgtatt tgtttgtatt tcttgcttta attgttcaaa attgttaata
    12661 taatcatagc ttaaagcaga ttttgaggca gatatagtat tgaaatttaa aggatttaag
    12721 aaatttttag ccccaaaaag tccccctagg aaaatactta gagaataagc taaaataaga
    12781 attaaaatac tttttttaat tttagaaatt attgtaaaac ttttttcaaa aattcccata
    12841 aaaacactaa aaaatacacc taaaattcca taggcaatta aaatgtaatt ttcttcaata
    12901 attctagaaa gtatccaaat agccatagcc aacataacaa aaccaaagaa aatttttact
    12961 ttttccatcc aaaaaccagg tttaataaaa cctaatccta agcctatgaa aagcaaaggt
    13021 atacccatgc caaaactcat gataaaaagc gcactaccgc ctaataaagc attgcctgta
    13081 ttggctatat aaattaaagc acctgctaaa ggagctgcta cgcaaggacc tactattaaa
    13141 gcagataaaa atcccatgat ggctatacct aaaactcctt tccctttttc gcttttttta
    13201 tgtataaagg tttgaaatct taatggcaat tcaaaacgaa aagctccaaa catagcaaaa
    13261 gcaaaagcta tgaaaattag agcaaaaaga attaaaataa taggtttttg taaaattcct
    13321 tgaatacttg ctcctagaaa acttgctata actccagcaa tagcataggc taaagacatg
    13381 aaaaaaacat agataaaaga gagaaaaaaa ctatattttt ttgaaaattt agcattactt
    13441 tttgctacga taagagaaga taaaatcgga atcataggta aaatacaagg tgttaaggag
    13501 agtaaaagtc catagccaaa aaaacttagc aaaatccaaa aaaagttatc tgttgctaaa
    13561 aaatttgcta tagagctttc ttcagattca attttagttt ttttatctgt tttttgagtt
    13621 ttgtaaggtt ttgaaatttc aaaagcatct tttttagaaa tgagatcaaa gtaccaagtt
    13681 tgaggattat aacacaagcc ttgttcagaa caaccttgaa attcgagttt gattaaattt
    13741 gtggtatttt ttgcaaagtg ctctagtaat aaatttggca aagctaaatt taatttttga
    13801 taataaacat tttcattacc tcttgtagaa ctttgaggta gattaatcaa agaacttata
    13861 tctttttcgt ttatatataa tttaagttta ttagaataaa gataaatatc ttttccaagt
    13921 tcaatatcaa ttgagataga gttattataa gagtttgatt ttacattaaa agcttcattt
    13981 aaagacaata tagaagcaaa acataaacaa aaacttaata aaataatacc aaaaatacgc
    14041 ataaatttcc taaaaactta ttttttcctt tatttttagc ttcaattata atttattatg
    14101 gtaaatttgc tttaaatact ttataaaggt ttgaaaatgc aagaaaataa ttctccaaaa
    14161 acgcaagcgg ttgttaaaaa gaatgaaatt tatgtttctg ttaaaagaaa gaaaagtaca
    14221 atagaatatg aaaaagattt aaagaatttg caaattgagc ttttgaaatt tcaaaatcat
    14281 gttaaagcca agggtttaaa ggttcttata cttatagaag ggcgtgatgc ggctggaaaa
    14341 ggtggggcga ttaaacgttt gattgagcat ttaaatccgc gtggttgccg cgttgtggct
    14401 cttgaaaaac ctagtgatgt ggaaaaaaca cagtggtatt ttcagcgtta tatagcacat
    14461 ttgccctcgg ccggtgagat tgtgattttt gacagatctt ggtataatcg tgcaggagta
    14521 gaaccggtta tgggtttttg tacaccgcaa caacataaag attttttaag agaagtgcct
    14581 ttgtttgaaa atatgatttc aaatagtgat attatttttt ttaaatttta tttttcagta
    14641 tcaaaagatg agcaaaaaaa acgttttgaa aaacgccgaa gcgatccgct taaacaatat
    14701 aaattatctc ctgtggatca aaaatcgcaa gaattatggg ataaatatac tttagctaaa
    14761 tactctatgc ttttagcatc taatactcca acttgtcctt ggactattat ttcttctgat
    14821 gataagaaaa aagcaagatt aaatttattg cgttttatac tttctaaggt agaatatcca
    14881 aataaaaaaa ctggagattt ttccaaaatt gatgcaaaat tagtgcgtag tggagaagaa
    14941 gaaatacgaa aaatggaggc gaatttggaa aaacttgaca gtaaaaaagc agatgagaaa
    15001 ataaaagatt tagattaagg aaaagaatgc aaaagctggt tgaaaattta gcactaaagt
    15061 actatgataa agtagttgat ttaagacatc aaattcatat gcatcctgag cttgaatttg
    15121 aagaagaaaa tacagctcat ttagtgtgta aaattttaga tgagtttggc attaaatatc
    15181 aaaaaaatat tgcaaaaaca ggaattttag ctactataga aggaaaaaag aagagtcaga
    15241 aaaaaccaaa atgcgttctt ttaagagcgg atatggatgc tttgcctgta caagaaaaaa
    15301 ctaatctaag ttatgcttca aaaattgatg gtaagatgca cgcatgtgga catgatggac
    15361 atacagcagg acttttggga gctgctttga tattaaatga gctcaaagat gaattttgtg
    15421 gcacgattaa atttatgttt cagcccgcag aagagggaag cggtggagct aaacctatga
    15481 tagaatcagg tgtattggaa aatccttatg ttgatgcggt ttttggttgt catttatggg
    15541 ggtctttgct tgaaaatact gctcaaattg taagtggcga aatgatggct ggaacggata
    15601 tttttgattt ggaatttatt ggcagaggag gacatggagc tcatccgcac acttgtatag
    15661 atcctataat tatggcaacg caatttgtaa ataatataca aagtgttgtt tctaggcgtt
    15721 tagcccctta tgaagcaggg gtgattactg taggtcaaat ttgtgcagga actacttata
    15781 atgttattcc tacaaatgct tatttaaaag gaaccgtgcg ttttttaaat gataaaacac
    15841 aagatatttt aaaaagttct ctagaagaag tggctgctgc tacagcaaaa tctaatggtg
    15901 gagattataa gcttaaatat actaaagaat ttcctccatt gattaatgat gaaaaagctg
    15961 ctttaatagc aagaaaagct tttgcaaagg tcttaggaga agaaaatatc attgtttctt
    16021 ctaaacctga catgggggct gaagattttg cttttttaac acgagaaaga atgggagctt
    16081 atgtgtttgt tggaatttca aaggatttaa atcatccagc tttgcatcat agttctactt
    16141 tttgttggga tgatgaaaat ttaaaagtct taatgcaagg tg
//
LOCUS       DARBAC010000032        15962 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.032, whole genome shotgun sequence.
ACCESSION   DARBAC010000032 DARBAC010000000
VERSION     DARBAC010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15962
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.032"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(96..2462)
                     /locus_tag="SB799_000759"
     CDS             complement(96..2462)
                     /locus_tag="SB799_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HEG0868012.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIAGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELVRVKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFASEFILYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHTNRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYIQALTYERMQNVQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ"
     gene            complement(2485..3873)
                     /locus_tag="SB799_000760"
     CDS             complement(2485..3873)
                     /locus_tag="SB799_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEG0868013.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLEAKAFLATLNNDIVSFYAFLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSVAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIVFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHALFMKNDRVYNIKFSFIQNFILACC
                     VCVSTFAILLML"
     gene            complement(3863..5350)
                     /locus_tag="SB799_000761"
     CDS             complement(3863..5350)
                     /locus_tag="SB799_000761"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEG0868014.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALILMLLSSLMIFLSFLFLKLEQKALVSC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLIALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYVNSPVLVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIENFSLRLREIVALVCIIVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(5352..7142)
                     /gene="nuoL"
                     /locus_tag="SB799_000762"
     CDS             complement(5352..7142)
                     /gene="nuoL"
                     /locus_tag="SB799_000762"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEG0868015.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLLVALSAF
                     CSLYLLFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVARDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKFTAILMCIGSLALVGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHNEHPHEASKIALLAMSPLM
                     VLAIVAGFFEHSFFEYLSTKLVFIDAQNQIVMICASVAAILGVILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPQFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQIIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            complement(7144..7440)
                     /gene="nuoK"
                     /locus_tag="SB799_000763"
     CDS             complement(7144..7440)
                     /gene="nuoK"
                     /locus_tag="SB799_000763"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEG0868016.1"
                     /translation="MIEKYFFIAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGVALCVLWYRRKGTLELKSLKEVEA"
     gene            complement(7437..7955)
                     /locus_tag="SB799_000764"
     CDS             complement(7437..7955)
                     /locus_tag="SB799_000764"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEG0868017.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAIMFFDASKEFKEQLKAKKSFFTLVVLSAIL
                     LLAMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     VLARKELTKEKQ"
     gene            complement(7952..8593)
                     /gene="nuoI"
                     /locus_tag="SB799_000765"
     CDS             complement(7952..8593)
                     /gene="nuoI"
                     /locus_tag="SB799_000765"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEG0868018.1"
                     /translation="MKNYYLVDEKRKTPVSAWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVGNYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDADLLVVKTPNYYDVMIERALENQDTQEQGENK"
     gene            complement(8603..9601)
                     /gene="nuoH"
                     /locus_tag="SB799_000766"
     CDS             complement(8603..9601)
                     /gene="nuoH"
                     /locus_tag="SB799_000766"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEG0868019.1"
                     /translation="MSDFAFFALEALIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVAII
                     SYESVGALALIAIVMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYASMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALAVLL"
     gene            complement(9594..12056)
                     /locus_tag="SB799_000767"
     CDS             complement(9594..12056)
                     /locus_tag="SB799_000767"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEG0868020.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRSGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFEELVKLFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDIIKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDVGIAKYSKNFISHIHKSGDEEQILYFLLQKFSQDEGIK
                     THLAEFFVSENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKKIIEVQRSV
                     FAKNLGIDEDKLEDLLLKKANFTLVIGSDFYFHKNATKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDKNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKEFISPNFENLNPKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLGVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            complement(12053..12745)
                     /locus_tag="SB799_000768"
     CDS             complement(12053..12745)
                     /locus_tag="SB799_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868021.1"
                     /translation="MIYDNALCFLDMLSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFSDLDEGYLSAESCFGEEEAGEVLAFLREAKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYELKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSLKAKLCLDENLQGTIAFLNYENNG
                     FDFIPIRIKEAK"
     gene            complement(12742..12969)
                     /locus_tag="SB799_000769"
     CDS             complement(12742..12969)
                     /locus_tag="SB799_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868022.1"
                     /translation="MRRIDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFIKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(12966..14192)
                     /gene="nuoD"
                     /locus_tag="SB799_000770"
     CDS             complement(12966..14192)
                     /gene="nuoD"
                     /locus_tag="SB799_000770"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEG0868023.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRIASHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCATLYKDTPPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14194..14988)
                     /locus_tag="SB799_000771"
     CDS             complement(14194..14988)
                     /locus_tag="SB799_000771"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEG0868024.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKEDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFVADKNGFEVF
                     YQLLNLEKRLRVRIKTFVGVKERLQSVAHIFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            complement(14985..15488)
                     /locus_tag="SB799_000772"
     CDS             complement(14985..15488)
                     /locus_tag="SB799_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEG0868025.1"
                     /translation="MAEHQINYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLV"
     gene            complement(15470..15859)
                     /locus_tag="SB799_000773"
     CDS             complement(15470..15859)
                     /locus_tag="SB799_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HEG0868026.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGLLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
BASE COUNT         5982 a         3005 c         1897 g         5078 t
ORIGIN      
        1 taagtgatat agctaataat atcttagaag atgttaagaa gaagaggttt taaccttaga
       61 taactagcca aaaagctagt tatctctaaa tttacttatt gatttaaaat ttgattttta
      121 ctcttacata aattctgcca atttgaagca cttttgattt caagacattg ttttaaactt
      181 tctttttcag cttgtacatt ttgcattctt tcataagtta aggcttggat atataaagct
      241 cttgctctat cttcatctga aagttttaat ttaagtaaat ctgttaaaac agctaaactt
      301 tcttcatttt tattgatttt agtcaaagca tcaagatata taaattctaa attaggacta
      361 aaaagattta tacctttaaa attttgatag tcaatggcct taggtgcgta agttaaaata
      421 gttgtttgca tattatgatc attagcgtaa gaaagtaaag catcgtaggc ttctaccata
      481 ctaaaattca ttggaaaact ttctaaaatt tgcaaaattt taatggcttg attgtagtca
      541 tttaagcgca ataaagataa aaattgcaaa taataagcct taaaattctc atcatcactt
      601 tttaaaattc tagaattagc tatgtcttta gaaattttaa tcacctgagg atattgttta
      661 ttgtcaaaaa gaatagatgc tttttgaaga ccataaaata tagaatcttc attataattt
      721 ttatctatat aatcaagtgc ttgttcaaca ttagaagttc tgataagaca agctaacatt
      781 tgttttttat tctcaatttt ctgacctata tcataagcac taaaacgcat aaaaatattt
      841 gcagcattga tacaattatc agcttttatc gcatttttta aatcattaat ggctgctttc
      901 tctaaaaatt gagtagcatt tggaattttt ttactttcta taagatcttt ataagctaaa
      961 atagcactaa aatttccctc tttataataa agtgcaacat cttcatctaa agctttattt
     1021 gcaatattct catctttatt tgcatattgc ttcattaaat ctgtataacg ctgatgcaaa
     1081 aagcttgcat tattatcacc taaagcaaag aatacctcat cacttgcttt tttaatttca
     1141 tctaaatact taccatctaa ataatcatcc atatataaat caaggtattt tttagcatca
     1201 ctagatctgt tagtatgtga taaaactaag gctaaatctt ttaaagtttc ttcataactt
     1261 ggatcaagtt ttgacatttt agcaaaggca tcttcataaa tacttgcact tatatcaaat
     1321 tgtccttttt gattaaataa tttagcaagt tctaaagatc ttggaatatc ttttccaaaa
     1381 tattcaggat tggcttttaa aatggtatta atatactcta tagctttatt tacttgctca
     1441 tttgaaagca aattctttgc caaactcata gctgctcttg cagctaaatc taaatttttt
     1501 gtattaaaat aagtattttc ataaatattt acagcttttt ctttttcatt taaattataa
     1561 atatagtctg cataatcaag ttttgataac tgagtaaaat aattattagg ttgttcatta
     1621 tccaaaatcg acattgtata ctctacatca gcacgctgag ctaaagcgat ataagttctt
     1681 aacattatat gtaaaacttc tgaaaaattt ttatcacttg taaaagtacg cgtccaattt
     1741 ttagcatcat caatcatctt ttctaaaatt tgttgatcac gcatacttgg atcttgagtg
     1801 taaagtttat tttgagctct taatttataa agtataaatt cactagcaaa aatactgcca
     1861 cgatatctat tgatagcatt ttgtgcatca atcacaactt gattgtaatt agccttatcg
     1921 tattcttttt tgatgcgtaa ataagtattg atatctgcac tttgaggaat aacaacagga
     1981 tcagaattta aatctaaagc tccaacataa ggcaaactct catgtggaaa attgatatta
     2041 aaatcaagtc catcatagtc tttaacgcgt actagttctg gtgtaaaaat aaaagtaaaa
     2101 gccttacttt tatgcgaact tgatgaactg agttctttat ctatataaat attttgagaa
     2161 gtgtcaaaca ttcttgcttg tatttttggc aaaatgatca ttttaatttt ttgagcttct
     2221 tgtataaatt ttaaatcaaa agcagaaaaa ctctgatctt ttaatttatt atcaaccata
     2281 cctgcaatat cacattcaaa atgaactttt gcttcggtaa taaatttttg acatgtaaat
     2341 tctaaatcat tactcgcatg taaaactgca aaagcttgat tattttcgcg acccgtattt
     2401 aaaacaagct caaaagcaaa agcatttaaa aaacttaata aaattaaaaa taatattctc
     2461 ataaaaataa ttatagcaaa actcttataa cattaacaat atagcaaaag tgcttacaca
     2521 aacacaacaa gctaaaataa aattttgtat aaaactaaac ttaatattat aaaccctatc
     2581 atttttcata aataaagcat gaattaaaat ctttaaatac gcataaagca taataacaga
     2641 agataaagcc acaaaaagcg ccaaatacca atatccattt aaaattgctg tatttaaaat
     2701 cataaattta ccccaaaata ctccaaaagg cgggatacct gctaaagaaa gcacactaat
     2761 gcttaaacaa aaaacaatta aaggtttttt aaccaaaagc ccatttaaac tctcataaga
     2821 attattctca taattgctta aaatcataaa tacagcataa tttgcaaaag caaataaagt
     2881 ccaatatcca aaaatagcaa gcaaaattcc atcaaaattt tgttctttta ataaaggaat
     2941 gcaagctacc aaaaccaaag aagaatgcac tacagaacta taagcaaaca tttttttgat
     3001 attgttttga cttagagccg caaaagcgcc tataagcata gaaaaaatcg ctagaactat
     3061 tatgatatat tcaaaacctg tattatttaa aaaatcaaac aaacgaataa ccacaaccaa
     3121 catggcaact tttggcacaa ctgaaataaa agcaaccaaa tttgtatgtg ctgcataata
     3181 cacatcttta agccaaaaat gaaaaggtgc caaagaaagc ttgattgcac aaagaacaaa
     3241 aatcatcact ccggcaccca aaagcatggg atctttttga aactcatttt ttaacgctaa
     3301 attagcagat aaatctaaag ttcctgtttt taaataaata aaagctacag ccataacaaa
     3361 aaacccagct cctacagccg ctacactaaa gtattttatc gcacttgaaa tagcattatc
     3421 acttccacgc attgctatta aagtataaag tgctaaagaa gaactttcaa gtcctataaa
     3481 aataagcact aaatttgagc ttgaaaccat caaaagcaaa gatgcgatca taaataaaaa
     3541 taaagcataa aattcacctt gattttcttc tttttgcatt aaaagatata aaaatgaaaa
     3601 acacaaaatc accaaaaaag cataaaatga aacaatatca ttatttaaag tagccaaaaa
     3661 agcttttgct tctaaacctt gagcatttgc attatttaaa atcaaaaaag cacttacaat
     3721 taaagataaa gaacttatac cgatataaaa cgatcgatga aatttccaaa aaccagagca
     3781 aagcaaaaga actattgcag ttgtaattaa aaataaaaat ggataagata agcttatatt
     3841 taaaagttct aaatttaaaa aattatttaa catttgcctc tcctatttta gataaaaaat
     3901 ctaaagtatt ttgctcaaca gctctaatat tcattgtttt tataagatta tccacatctt
     3961 tttgtatggg ctttaaaagt atatttggca taagccctag tccaaaaatc attactataa
     4021 tgcacacaag cgctactatt tctctaaggc gtaaagaaaa attctctata aagctttgtt
     4081 tttgcatgaa aaatattttt ctaaatactg cgaacatata aattgctcct aaaataatca
     4141 ccaaacctgc caacaaagcg taaaataaat taatctttgc tatacctaaa agaattaaaa
     4201 actctcccac aaaagaaaca gttaaaggca aagaaacgct tgcgagtaaa attaacataa
     4261 agaaaattga aaataaaggt gcttttttgg ccaaagaatg gtaaaaagaa atatcataag
     4321 tatgatatct ttggtataaa agttcaacca ttaaaaataa agctcccgtt acaataccgt
     4381 gtgcaaacat ataaaaaacc gcaccgctaa tacccaaagc atttaaagaa aaaattccca
     4441 aaatcatcac accaagatgt gaaatagaac tataagcgat caattcttta atattttctg
     4501 ctctataagc aattaaagca ttataaacga tactcactat acataaagct acaattaaag
     4561 gcataaaata cacactcgca tctggaaaaa gtggtaaaca aaaaagcaaa aatccaaaag
     4621 gagccatttt aaaaactaca agcattacag aaacaagaac aggcgaattt acataaacct
     4681 taggtgccca agtatgaagt ggaaataaag gagctttgat agcaaaagcg ataaaaaatg
     4741 ctccaaaaag taaaagttgc tctgtaaaat ttactgccga ggcattattt ttccaaattt
     4801 ctaagtcaaa agtgaagatg tttaaaagtt gataatttaa ataagcttga taaatcaatg
     4861 ctataagcat taaaattgaa cccgcaaaag catagataaa aaatttcacc cctgctctaa
     4921 aatctttacc ataaactccc ataatataaa gcaaaggcaa aagagaaaat tcccaaaaaa
     4981 cataaaataa caaaccatct tttgcactaa aaagtcccat aattgcaaat tctaaaaaga
     5041 atatacaaga tacaagtgct ttttgttcca gctttaaaaa taaaaagctt aaaaatatca
     5101 tcaaagaact taaaagcatc aatataagtg cgatactgtc tactcctaca tgaaagctaa
     5161 aaaatttcaa aattttaaaa gaaagattat aatcaaagct taccccttgt aaaaaatccg
     5221 caaaaatatc caaatttaaa gccaaaatca taaaacttac aacaacgcta aaaaccttaa
     5281 cgcctccacg atttaaaagc aaaaccacaa aagcagaaat taaaggaaaa aatatcaaat
     5341 aatttagcat tttacaccat ccataccaaa atcaacaaaa tcacaaaagc tgccaccaaa
     5401 aatctaagca ttaagtttaa gctgtttggc ataatcattt tttgtgaaat aatttgagaa
     5461 tacaaagcaa ttttttcaac tattctatca aaaatataaa gatcacaatg ctttaaaatc
     5521 gcacataaac tttcatattt tgaaacgata aattgatgat agaattgagg aataaaataa
     5581 tcattactta aaagtttgtg aattttattt tcttcaatac tttctttaaa ccaagaattt
     5641 ttataagcaa aaatagccaa aattacaccc aaaatagctg ctacactcgc acaaatcatt
     5701 acaatttgat tttgtgcatc aataaaaact aattttgtgc ttaaatattc aaaaaaacta
     5761 tgttcaaaaa atcctgcaac aatagctaaa accatcaaag gactcatagc caaaagtgcg
     5821 attttacttg cttcatgtgg atgttcattg tgtcttgcag gggtaaaaaa taccaacatt
     5881 aaaagtctaa agctataaaa tgctgttaaa aaagctgcga ttaaaagcac taaaaaaata
     5941 ccatggtgaa aagaaatgaa agaatatcct aaaatcaaat ctttagagaa aaatcctgca
     6001 aaaggataaa ttcctactaa agctaaagat cctatacaca tcaaaatagc cgtaaatttt
     6061 aaaggtttaa aaagtccacc cattttttta atgtctaatt tatcattcat agcatgcatt
     6121 acatttccag cacctaaaaa aagtaaagat ttaaaaaaag catgtgtagc taagtgaaat
     6181 aaagctatac cataagcccc aagtcctgcg gccacaaaca tatatccaag ttgcgataag
     6241 gtagagtaag caataatacg ttttaaatcc ctagccacca aagccataga ggctgcaaaa
     6301 atcgctacaa aagctccaag taaggcaata atataagaaa cctcaggaac taaatcataa
     6361 agcgtgctag cacgaattac caaataaacc cccgctgtta ccatggttgc tgcatggatt
     6421 aatgcagaaa caggagttgg ccctgccata gcatcagcaa gccaagtgtg aaaaggaaat
     6481 tgtgcagatt ttcccatagc tcctataaat aaacaagttg cgattaagat caaagcattg
     6541 tgatctaggc tttgtgccat ggaaaaaact tcatcatatt ttaaagttcc tgcttgtaaa
     6601 taaagccaaa aaattcctaa aagcataccc aaatccgcaa tacgattcat aataaaagct
     6661 tcattagctg caaaagaata agtatcgttt ttataccaaa aacctatgag caaccaagag
     6721 caaagcccaa cgccttccca acctacgaaa agtcctaaga aattatcact cataactaaa
     6781 aaaagcatag aaaagacaaa aagccccaaa taagcaaaaa atttattaaa accttcatca
     6841 tgagccatat aaaaaatact ataaaaatgc acacaagtag ctacaatacc tacaacactc
     6901 atcatagtga gcgaaatggc atctatatca aagccaaaat ttactccagc aaaccattca
     6961 aacaaactca cattaaaagc ttcattgcaa aaaagcaaat acaaagaaca aaaagcactc
     7021 aaagctacta aaagtgaaca aattatccct acaaattgtt ttttctcact caaagcaaaa
     7081 caacttgcaa acaaaaaagc tacaaaagga ctaaaaagag aaatcaaagc taaattttgc
     7141 atgctaagcc tccacttctt ttaagctttt taattccaaa gtgccttttc ttctatacca
     7201 aagcacacac aaagctacac caacagctac ttcacaagct gctacaccca tgataaaaag
     7261 cgcaaaaacc tgtccattta aatcattgtg cattttagaa gctgctacta aggctaaatt
     7321 agcactattt aataaaattt cactcgaaat aaaaagcatg atgagatttt gtctttttaa
     7381 aatccctaca agccctatga caaacattaa aatagctata aaaaaatact tttctatcat
     7441 tgtttttcct ttgttagctc tttacgagca agcactatag cacaaactaa agcaatcaaa
     7501 agcaaaatag ctataaactc aaaagctaaa agatattttg aaaaaatcgc taaagccagt
     7561 tgtttattaa aatcaaacaa agcaggatca tttaaaggca aatccgtgct gatattttgg
     7621 tatttaaaac ctataagcat ggccaaaagt aaaatcgcac ttaaaaccac caaagtaaaa
     7681 aaactttttt tagctttaag ttgttcttta aattctttag aagcatcaaa aaacattatc
     7741 gcaaaactat aaagtccaag cacagctcca ctataaacaa taatttgtat cacgcctaaa
     7801 aactctgcat caagtaaaaa ataaaatccc gataaaaaca ccattccacc cgctaaagca
     7861 gaaagagaat aaagcatatt tttacttaaa accgcaatgc caaaaaaacc taaaaccact
     7921 acactaaaaa atacaaaagc caaattttct atcatttgtt ttctccttgc tcttgtgtgt
     7981 cttgattttc taaggctctt tcaatcatca catcgtaata atttggtgtt tttaccacca
     8041 ataaatcagc atcttttcta aggcttcccg ctccttcaaa ttcaacttga tttttaagct
     8101 tatcaatagg agttaaaaaa tcttgcttgt aaccaaaata agacctttgc tcggccgcat
     8161 tttcatactc tgtgccatgt actatagcaa gttcaggaca aacctcagca caaaaaccac
     8221 aataaataca acgccctaaa ttaatactat aatttcctac ttttttacgc ccattttcat
     8281 ctaaagaagt ttccattctg atacaattac taatgcaaat tttttcgcaa agcccacaac
     8341 ctatacatct ttcattttcg ctttctataa aacgcatcaa acgatgaaca gcacggtaac
     8401 gattatcaag ctttaccttt tcaaaaggat atttaatcgt agcgctatta tttctcttaa
     8461 gtaattctct catcatcaca aaaagcccta caaaaagctc tagtttaacg cttctacgca
     8521 aagcttgtga aattttttcc caagcactaa caggagtttt tcttttctca tctactaaat
     8581 aataattttt catatcaaac tcctataaaa gaactgccaa agcagtgatt aaaaggttta
     8641 aaaccgctaa agggattaag attaaatagc acattttcat cacttgatct ggacgcaatt
     8701 gcggaaaagc agctcttgcc caaaaatacc aaaagaaaat aaaacttgat tttactatca
     8761 tcataatcca accaggaata atccaaaagc tattaaaacc ccctaaaaac aaaagagtta
     8821 ccaaaatagc tccagctatc atagaagcat attcacctat gaaaaacata ccccatctta
     8881 aacccgaata ctccgttcca taacccgcta caatttcagc atcattttcc gtcaaacaaa
     8941 gcggagttct attagtctct ataaataaag caattataaa aagcacaaaa gccaagggct
     9001 gtttaaaaat aagccaagaa aaaaatccat cgctttgata attgttaata tccaccaaag
     9061 aaaaagaacc tacaagcatt acaatagcaa tcaaagctaa agctcctacg ctttcatagg
     9121 aaataatcgc tacaagccct cttgcagccc ctaaaatcga ccatttatta ttacttgcaa
     9181 gtccacccaa aaacaccgca taaaagcaaa gtcctgaagt accaatgaca aaaagcaaag
     9241 ctacattaat atctgccact ataggctgaa tcacccttcc aaataaagta aattcaggca
     9301 acatgggaat agctgctaaa gaaacaaaag cacaaatagc agaaattaaa ggtgctatag
     9361 caaaaataaa tttttgcgaa tttgaaggga ttatatcttc tttagtaaaa agttttatca
     9421 tatcagctac aagttgaata agcccaaaag gccctaccat atcaggccct atacgtcttt
     9481 gaaaataagc taaaaccttt ctttcagcat aagttgcaag acctgctaaa ctcgcaaata
     9541 ttgcaatgat aataatacat ttaattaaag cctctaaagc aaaaaaagca aaatcactca
     9601 tggtttgctc ctaatttttc taaattcgcc acaacaaatc tttcatcaaa aaagcttagc
     9661 gtatcaagtt tttcatcgaa atacggcaag aaagctccat tttttatatc cttatccaca
     9721 cgcacgctaa ggcttaattc tttatctttt attttaagtt ttacaagatc tttatctttt
     9781 aaatttttct ctttagctaa attttcactt acacctaaaa aaatcacctc attaatcgca
     9841 ctagcacgat ttgaaaatct accaaattga tagctaggat tagcgctata aagcaaaatt
     9901 tcatcttctt ttgggtttaa attttcaaaa tttggagaga tgaattcttt tttagcaact
     9961 tgtttaaaac attctaaatt aagctcatat ccccttttac aatcacctgc attggtataa
    10021 aaattatcta aatgatcaaa atcaatcgga gaaaaacctt tatttatagg gagtctctta
    10081 gtataattta tagtatattc ctcatcaaaa cctaaagcat tagccaaatc atttaaaaaa
    10141 tatcccttaa attctaaagc agcgttagtt ggcaccactc ttttatcata atttaaaaaa
    10201 gttccttctt gctgatttaa actcgcacta gctaaatttg catgctcttc ataagaaaaa
    10261 ctaaaatcac ctttttcatt gtagcctaaa gtcttgcctt cttgtgtatt tttatccaaa
    10321 tcacaaatca tagccacacc taaggtatta gtatgcgtag gatttaaaaa gactttaaaa
    10381 ggagtagtat tttgaatcaa agcaagtagt ttagcaagtt ttgtcgcatt tttatgaaaa
    10441 taaaaatcac tccctataac aagagtaaaa tttgcttttt taagcaataa atcttctaat
    10501 ttatcttcat ctatacctaa atttttagca aaaacagaac gttgcacttc tataattttt
    10561 tttacttttt taggtacgac tttttttact tctttttgga tttcattgcc ttcttcatct
    10621 ttttctatga cttgttctac aacttcttcg ttgatacttt cttctatttc tttattttcg
    10681 ctaacaaaaa actctgctaa atgagtttta ataccttcat cttgactaaa tttttgaagt
    10741 aaaaaatata aaatttgctc ttcatcgcca cttttatgaa tgtgtgagat aaaatttttg
    10801 gaatattttg ctatacccac atcttccata ggatgaaaat aaagccctga gcctttattc
    10861 atcactaaag cattattgat tttatagcta agcgttggag catcatatct taaaagcatt
    10921 ccagccacaa ccaaaaaatc actttttatt atatcttgag tattggcact ataaaactcg
    10981 ccagaattag cgataaattc ttgtaaaaat tctttaaatt tcaaagcttc ttcattgatc
    11041 aaagaaagat taaatttctt ttttaaattt tgtaaaatca aagcttcttc attggtaata
    11101 aaactattaa atttaatgtt tttaatttca tttttctcaa aaagtttcac aagttcttca
    11161 aaggcttttt catctttatc cgcctcattt tgcgtatcaa aagcaaatct tgcagcctta
    11221 tttaaactcg caaaggcaaa atcattactc acacgataaa ttttttcttt ttgattacta
    11281 atgccgcttt gcttaatatc ataatacatc aactcacaat cgcttgaatg cggatttgaa
    11341 gcagggattc ttttaagttc ccaaatattt gaagtgtatt gaaatttcga acctatcaaa
    11401 gctcctgttg gacacacgct tgtacattct ccacaaaatg aacaatcaag cgtatcacca
    11461 tttgcagggc ctatcaaact tttttgaaat ttagtccaaa tcgcataagc atcttttccc
    11521 atgctctctt taaagctatt atccacacta tctccgctac gaggaacagt ctttaaagca
    11581 ctttctccga ttttatcctt acaaactgta atgcaacgct cacatactat gcaaagtgcg
    11641 ggatcataat taatcattcc ccaatgttta tgtggtttat gtgtgtcttt aatccaatgc
    11701 ttttgaacat ttacacggct tttatgagtg aaattttgca attcacactc gcctgattta
    11761 tcacaaactc cacattctaa aggatgattg atacaataag cttgcatgat ctcatttctt
    11821 tcatcccaaa gattttgcaa atcactttct acaaccatgc cctcttttgc tttagtatta
    11881 caagaatata cctttttacc atcagcttca accatacaca tacgacaagc caaagtagga
    11941 ctacagcctg aaagatagca aatcgctgga ataaaaatat catttcttct tgctatattt
    12001 aaaatatatt cgccttcttc aaaggcgcaa tctataccat taatcttaac tgtcattttg
    12061 cttcctttat gcgaattgga ataaaatcga aaccattgtt ttcataattt aaaaaagcta
    12121 tggtgccttg taaattttca tctaaacaaa gcttggcttt aagactaaaa tctttagcca
    12181 aaatttcaac ttcactttga tctttgcatt ttgcaatttg taaaaattgc tttgaacaat
    12241 gtaaattttt atcttgtaaa tttgctctaa aaagcactaa accgtcataa ttatctagtt
    12301 cttttagggt gtttaatttg gcctttttaa aatcgcattc ttcttcatcg ctatctaaaa
    12361 tctttaattc atattttacg cttaagaaat tcaaaaaata tttgatattt tcgctatctt
    12421 tgtaagaatg gatattttta tctataatta aatacttagc ctctcttaaa aaagcaagca
    12481 cttcacctgc ttcttcctct ccaaaacaag attcagcact taaatatccc tcatctaaat
    12541 cgctaaattg tccttcatcg cttaatttac aaagcaaagc caaaacaaaa ctcaaacttg
    12601 caatttcaca tttataaaat ttagctttta aatttttatc ttccaaacaa gaaatattaa
    12661 tgctatttac acctattttt tcacataaat ttttgttttt aaggcttagc atatctaaaa
    12721 aacaaagagc attatcataa atcatactct ctcctttttt ataacaatag tccaatctac
    12781 ttgattaaat ttcaaagaat ttaaaagctc acagccttgt tcttttataa aagaaaaact
    12841 tttttcaaca ggagaaaaat cgccgatttc aaaaagcacc actaaaacct cgccttgttt
    12901 tgcttctttt atgatttgtg ctaaatcttc aaaaagttct ttgctttttc ttaaatctat
    12961 tcttctcatc gatctatctc acctaaaact atatttacat tacccataat ggctacaaca
    13021 tcagctaaat aagtacctac aagcatttct tcaaaaaatg cacaatgcca ataactaggc
    13081 gttctagcct ttaaacgata aggtcttcct gtgccatcac tatggataaa aaagccaagc
    13141 tcaccttttg gactttcagt aggcacataa acttcgcctt tagggggttt taaaccttga
    13201 gtgattaaaa caaaatgctg cattaaagaa taattctgcg ttaaaatttg ttcctttgaa
    13261 gcacttacat actcaggatg cgtagctaaa atttcaggtg gagtatcttt ataaagtgtg
    13321 gcacattgtc taaggatttt caaactttca cgaaattctt gcatataaac tttatatctt
    13381 gcataagaat ccccttgcgt agcataaggc acgccaaatt caacttcatt ataaagcaaa
    13441 taaggctctt ctttgcgtat atcgtatttt ataccgcttc ctcttaacat cacacctgta
    13501 caaccccaat ttaaggcttg ctctttagta accacaccta cattttcagt tcttaaacgc
    13561 caaattctat tatcatctaa aagatcttca taatctttta aatcatttgg aaatttatcg
    13621 caaaatgcaa gcatttcttc taaataattc tcaggtaaat caagcataac cccacctatt
    13681 ctcatagaag aatgcgtaag tcttgcaccg caatactttt ctatcaaatc caaaacatac
    13741 tcacgttctc taaagcagta taaaaacaca ctcatcgcac caatatcaag cgcatgagtg
    13801 gcaagccaaa gcaaatgtga tgcgatacgg tttaattcta aaagtatcat ccgtatgact
    13861 gctgcacgac gtggaatttc taaaccacaa agtttttcga ccgccgcaca ataagcataa
    13921 ttatttgctg aagcagcgat atagtccatt ctatcagtag taggaataaa ttcttgataa
    13981 atcatatttt cagccatttt ttccatacca cgatgcatat aacctataca aggacgcgct
    14041 tttacaactt gctctccatc aagttctaaa ataagacgta aatttccatg tgctgaaggg
    14101 tgttgagggc ctaagttgat aatcattttt gagtcttctt gctcaaaagc tatattttca
    14161 taataaggtt ttaacttgct aggaatttgc attttaacgc cttttctcta aaatttttgc
    14221 ttcatcacgt tttacttttt ttacaaaagc cacaccttca tcttcttgat attcttgttt
    14281 aaaggaaatt tccttctttt gaccaccttt tggcacttca tgataaagtc ttgcaaaatt
    14341 tagcgtatct ttatcatcag caaaaccaga atctctttgt tcttcgccca ctacttcacg
    14401 atattctttg ccaaaaattt tatcaatctc ataccatctt gcaaactcat cgccctttaa
    14461 aggataagtt tttaaaagcg gatgtccaaa ccaatcatca ggcattaaaa tgcgttttaa
    14521 attgggatga tttatgatga aaattccaaa catatcataa atttctctct cactccaatt
    14581 tgctccttta aaaatatgag ccacgctttg caaacgctct tttacgccta caaaagtttt
    14641 tattctcact cttaatcttt tttctaaatt taaaagctga taaaacactt caaaaccatt
    14701 tttatctgct acaaaatcaa tagcacttgc ctctgtaaaa cttaaatacc ctaaagtttt
    14761 aagcatttgc aaggttttaa cattgtcttc ttttttaatt tctattaccc aaaaatcaag
    14821 ctctacaaag gaatttaaaa tttctacttg ggtttttaaa acttcaaaat cctctttaaa
    14881 aacactttca ttaacatcag attttacagt gtgtggcgca tgataaaatc tatctttgta
    14941 gtaattttga gtttgagcat tttttttatc gctatacttt ctcattatac caacctttta
    15001 ggtgcgattt tacgacttgc tttttctttg cggatctttt tttgcaaaat catcaaagca
    15061 aactgaaaac tttctggacg tggagcacag cctggcacat aaatatctac aggtataatt
    15121 ctatccactc cttgaacagt agaataagta ttaaacatac cgcctgtatt ggcacaactt
    15181 cccatagaaa tcacccattt aggatcaggc atttgatcat aaagtcttct tgtaaattca
    15241 gcatgctttt tacataaagt tcctgcgata atcattactt cactatggcg tggcgaagct
    15301 ctaaaaatcg ttccaaatct atcaaaatca tatcttgaac ccccagccgc catcatctca
    15361 atcgcacaac aggcaagtcc ataagataaa gcccataaag aattactcct accccattga
    15421 actagtttat caacgctagt taaaactacg ggtaaaccac ttgcataatt tatttgatgc
    15481 tctgccatgc aaacgctcct tttttataag catataaaaa tccaactcct aaaagtacga
    15541 taaaaacaaa aacttctaaa agtccaaacc aacctaaatc tttaaaaatc aatgcccaag
    15601 gaaacaaaaa cacaacttct atatccaaaa gtatgaagat taaggcgatg atgaaaaatt
    15661 gagagttaat cttgttagct tgtttaacag gaataggacc acattcataa attccaagtc
    15721 ctaatttttt acgatttttt gcggcaaaat tattaccgat ttttgaagct aaaaaaacca
    15781 gtccaaaaaa aataacacta gcaagtacta gcattaaaaa aataccaaaa taaggatgcg
    15841 aagcatctat atgagacatt tattctcctt ttttaaagca ctttaatcac tccacaacaa
    15901 aaattaaatt tacacttttc tttattttac tctaaatttt ctatattgaa acttatatta
    15961 aa
//
LOCUS       DARBAC010000033        15591 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.033, whole genome shotgun sequence.
ACCESSION   DARBAC010000033 DARBAC010000000
VERSION     DARBAC010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15591
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.033"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            78..296
                     /gene="infA"
                     /locus_tag="SB799_000774"
     CDS             78..296
                     /gene="infA"
                     /locus_tag="SB799_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEG0868027.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            468..581
                     /gene="rpmJ"
                     /locus_tag="SB799_000775"
     CDS             468..581
                     /gene="rpmJ"
                     /locus_tag="SB799_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEG0868028.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            584..949
                     /gene="rpsM"
                     /locus_tag="SB799_000776"
     CDS             584..949
                     /gene="rpsM"
                     /locus_tag="SB799_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEG0868029.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            959..1351
                     /gene="rpsK"
                     /locus_tag="SB799_000777"
     CDS             959..1351
                     /gene="rpsK"
                     /locus_tag="SB799_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEG0868030.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            1379..2005
                     /gene="rpsD"
                     /locus_tag="SB799_000778"
     CDS             1379..2005
                     /gene="rpsD"
                     /locus_tag="SB799_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEG0868031.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            2018..3031
                     /locus_tag="SB799_000779"
     CDS             2018..3031
                     /locus_tag="SB799_000779"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEG0868032.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGESNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            3035..3388
                     /gene="rplQ"
                     /locus_tag="SB799_000780"
     CDS             3035..3388
                     /gene="rplQ"
                     /locus_tag="SB799_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEG0868033.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFALLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
     gene            3561..4460
                     /gene="hisG"
                     /locus_tag="SB799_000781"
     CDS             3561..4460
                     /gene="hisG"
                     /locus_tag="SB799_000781"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEG0868034.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCMLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            4468..5754
                     /gene="hisD"
                     /locus_tag="SB799_000782"
     CDS             4468..5754
                     /gene="hisD"
                     /locus_tag="SB799_000782"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEG0868035.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAINAKDEISKIVSSIIKEVQEKG
                     DEALIEQALKFDKAEISKIKITQKEITQASNRLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALAYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGATIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KASDEVQSQLELLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            5751..6809
                     /gene="hisB"
                     /locus_tag="SB799_000783"
     CDS             5751..6809
                     /gene="hisB"
                     /locus_tag="SB799_000783"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HEG0868036.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPTLLKLK
                     NFGFKFIMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVRGLRYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKVSIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            6806..7393
                     /gene="hisH"
                     /locus_tag="SB799_000784"
     CDS             6806..7393
                     /gene="hisH"
                     /locus_tag="SB799_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEG0868037.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIKNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKAKEGFTFPHMGWNQVHSSHALFKGLEGAYFYFVHSYCVGLGEYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            7390..8124
                     /gene="hisA"
                     /locus_tag="SB799_000785"
     CDS             7390..8124
                     /gene="hisA"
                     /locus_tag="SB799_000785"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEG0868038.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLEKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQLALIEKLAKEVNVNLQVGGGIRSKEEVKALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLQNA"
     gene            8106..8873
                     /gene="hisF"
                     /locus_tag="SB799_000786"
     CDS             8106..8873
                     /gene="hisF"
                     /locus_tag="SB799_000786"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEG0868039.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINIPFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKEVQDLGAGEIVLNMMNQDGVKNGYDLEQLKAVYKICKVPLIASGGAGKMEHFLEA
                     FKLGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            8875..9498
                     /locus_tag="SB799_000787"
     CDS             8875..9498
                     /locus_tag="SB799_000787"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HEG0868040.1"
                     /translation="MQNFKELNEKIAWQKVDHLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIVDLSLDCDNDTLLILANPVGSTCHTGD
                     ISCFEKISKNADFVFLARLEKLINARKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKEELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(9522..10682)
                     /locus_tag="SB799_000788"
     CDS             complement(9522..10682)
                     /locus_tag="SB799_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HEG0868041.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIILEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     EGHQNIDLLKIIKDKFKDDEFAFVCLFEDKEPLSVESVYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(10708..11814)
                     /locus_tag="SB799_000789"
     CDS             complement(10708..11814)
                     /locus_tag="SB799_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEG0868042.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNATEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPITAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSKRYLTA
                     AEKIWGFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            11937..13052
                     /locus_tag="SB799_000790"
     CDS             11937..13052
                     /locus_tag="SB799_000790"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEG0868043.1"
                     /translation="MSEISLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            13049..13936
                     /locus_tag="SB799_000791"
     CDS             13049..13936
                     /locus_tag="SB799_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEG0868044.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     VLLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKATEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNIDSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            13914..15074
                     /locus_tag="SB799_000792"
     CDS             13914..15074
                     /locus_tag="SB799_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HEG0868045.1"
                     /translation="MKSARKNKNITIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLILDEKVVGHIDFKSRFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIKKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDANGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFMRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            15079..15579
                     /locus_tag="SB799_000793"
     CDS             15079..15579
                     /locus_tag="SB799_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEG0868046.1"
                     /translation="MQKLFLTFFYSGSIKKASGTFGTIAALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFLACAIAASVENSIVNFILAFV
                     LFRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDI
                     NLKDLF"
BASE COUNT         5681 a         2306 c         2753 g         4851 t
ORIGIN      
        1 attactaaaa attaagtaaa aattttaata atttttgcta aaattatagc ctttttattt
       61 catgaaagga gaaaattttg gcaaaagatg atgtaattga aattgatggc accgtacttg
      121 aagcattgcc taatgcaaat ttcaaggttg aacttgacaa caaacatgta attttatgtc
      181 atattgcagg aaaaatgcgt atgcattata taagaataat gccaggtgat aaagtaaaag
      241 tagaacttac accttatagc cttgataaag ggcgtataac ttttagatat aaataatcta
      301 agttatttaa aagctaattt tagataaaat tagagttttt gcgacaaatt acatcgaact
      361 atatgaagaa gtatttttaa aatccaccac ttattttgaa aatagttggt tattcataaa
      421 acctgatgta gtcgtaaatc aagtggaatt cattcaagga gacgctcatg aaagtgagac
      481 catcggttaa aaagatgtgc gacaagtgca aagtagttcg ccgtaaaggc gtggttcgca
      541 ttatttgcga aaatccaaaa cataaacaaa gacaaggata aacatggctc gtattgcagg
      601 tgtggattta ccaaagaaaa aaagaattga gtatggacta acctatattt atggtatagg
      661 acttttcact tcaagaaaaa ttctagataa agtaggaatt tcttatgata aaagagttca
      721 tgagttaagt gaagatgaag cagcagctat ccgtaaagaa attcaagaaa actatatggt
      781 tgaaggggat ttgagaaaac aagttgctat ggatattaaa gcacttatgg atttaggaag
      841 ctttagaggt ttaagacaca gaaaaggctt accagttcgc ggacaaaaaa caaaaacaaa
      901 cgcaagaact agaaaaggta agagaaaaac tgttggtgca aaatcataag gataaatcat
      961 ggcaaaaaga aaaatcgtaa agaaaaaagt agttaaaaaa aatatagcaa aaggtattgt
     1021 ttatatcagt gcgactttta acaatactat ggttacagta actgatgaaa tgggaaatgc
     1081 tatcgcttgg agtagtgcag gtggtttagg atttaaaggt tctaaaaaat caactcctta
     1141 tgcagcacaa caagcagtag aagacgcttt aaataaagca aaagaacacg gaattaaaga
     1201 agtaggcatt aaagtacaag gaccaggaag cggtagagaa actgctgtta agagtgtagg
     1261 tgctatggaa ggaatcaaag taactttctt aaaagatatc actccattag ctcacaatgg
     1321 ttgcagaccg cctaagcgtc gtcgtgtcta agatataaga aaaatttagg agaatattat
     1381 ggcaagatat agaggaccag tagaaaaatt agaaagacgc tttggtgtta gcttagcatt
     1441 aaaaggagaa agaagactag ctggcaaaag tgcactagat aaacgccctt atgcaccagg
     1501 acaacacgga gcaagaaaag gtaaaattag tgagtatgga cttcaattaa gagaaaaaca
     1561 aaaagctaaa tttatgtatg gagtaagcga aaagcaattc cgtcgtttat ttgctgaagc
     1621 agcaagaaga gaaggaaata caggggtatt acttatccaa cttttagaac aaagattaga
     1681 caatgtagta tatagaatgg gttttgctac aacacgtcgt tttgcaagac aacttgtaac
     1741 acatggacat gttttagtaa atggtaaaag agtggatatt cctagcttta gagtagaagc
     1801 aggtgctaaa atcgaaatta tcgaaaaaag caaaaacaat cctcaaatta caagagctat
     1861 cgaacttaca gcacaaactg gaatcgttgc ttgggttgat gttgaaaaag ataaaagatt
     1921 tggaattttc acaagaaaac ctgaaagaga agaagttgtc attccggttg aggaaagatt
     1981 tatcgttgag ctttactcta agtaataggg gctaaatatg agaaatatta caacatctgc
     2041 ttatacgcca acagaattta caatagaaaa cattagtgat actgtggcta aaatcagtgc
     2101 ttggcctttt gagatcggct atggaatcac cctagcccat cctttacgcc gtttacttta
     2161 cactagcacc ataggatatg ctccaactgc gattcatatt gatggcgtag ctcatgaatt
     2221 tgatagcatg cgtggtatgc ttgaagatgt agcacttttt atcattaatc taaaaaaact
     2281 acgctttaaa attaaaggcg aatcaaataa agaaatagta gaatttagct ttaaaggctc
     2341 aaaagaaatt tacggcaaag atctaaataa tgatcaagta gaagtagtaa ataaagacgc
     2401 ctatctagca acaatcaacg aagatgctga actcaaattc acattgatcg ttgaaaaagg
     2461 tattggctat gtaccaagcg aagaaattaa agagcttata aatgatccta aatttatagc
     2521 tttagatgct ttctttacac ctgtaagaga ggcaacctat gatattgaaa aagttttatt
     2581 tgaagataat cctgattatg aaaaagtggt tttaaccgta acaactgatg gacaaatcac
     2641 tccaaatgaa gcttttcaaa atgctctaga agctatgtat aaacaattat cagtatttga
     2701 taaaattacc aatgttagaa gtgtaattaa aaatcaagca acaagcaatg aactagaaaa
     2761 tactaaatta ttgcaaaaca ttacagattt aaatttaagt gctagaagtt ataattgtct
     2821 tgaaaaagca ggagtagttt acataggtga gcttgctttg atgagtgtaa gtgaacttgc
     2881 agggcttaaa aatttaggta aaaaatctct tgatgaaatt aaaaacatca tggaaagcat
     2941 aggttttcct gtgggaactt ctaagcttag cgataataaa gaaatactta aaaataaaat
     3001 cgcagaatta aaagcacaaa acgaaggata aagaatgaga cataaacatg gatatagaaa
     3061 acttggcaga acttcatctc atcgtgctgc cttattaaaa aatttaacta tagctttagt
     3121 aaatagcgga aaaatcgaaa ccactctacc aaaagctaaa gaattaagag gttatgtaga
     3181 aagattgatt actagagcaa gacttggaga ttttaacgct catagagcag tttttgcttt
     3241 attacaagat aaaaacgcta ccaataaact agtaactgaa attgctccaa aattcaaaga
     3301 tcgcaatggc ggatatacaa gaatcatcaa aacaagaatt cgccgtggtg atgccgctga
     3361 aatggctttc atcgaatttg tagcttaatc aaatcctagc ttttgctagg attaatactt
     3421 caattaaata tcctaaaaat aaaaagtttt aaataattat tttaaataaa attaaattta
     3481 tttattttct aaaacccttg ctaaaaattc aactacttat gctaatataa gtttttaatt
     3541 tttaatttca aggatatgtt atgcaagaaa acactcgttt acgcattgcg atacaaaaat
     3601 caggtagact ttcaaaagaa tccatagagc ttctttcaga atgtggtgtt aaaatgcata
     3661 tccatgaaca aagtttgatc gctttttcta caaatttacc catagatatt ttacgcgtta
     3721 gagatgatga tatccctggg cttatttttg atggggttgt agatttaggc attatagggg
     3781 aaaatgtttt agaagaaaat gaacttgaac gccagtcttt aggagaaaat ccaagctata
     3841 agcttttaaa aaagctagat tttggatatt gccgtctttc tcttgcctta cctcaagaaa
     3901 ataaatttca aaatttgaaa gattttgaag gcttaaggat agctacttct tatccacaac
     3961 ttttaaagcg ttttatgaaa gaaaatggga ttaattataa aaattgtatg cttacaggtt
     4021 ctgttgaagt agcccctagg gcaaatttag ccgatgcgat ttgcgatctt gtttcaagcg
     4081 gggcaacttt acaagcaaac aatcttaaag aagttaaagt catttatgaa tctcgtgctt
     4141 gtttgattca gaaagaaaat gctttaagta aagaaaaaca agccttagtg gataaaatta
     4201 tgttgcgtgt agcaggagta atgcaagcaa gagaatctaa atacattatg cttcatgctc
     4261 caaaagaaaa gcttgataaa attcaagccc tacttccagg agttgaaaga ccgactatct
     4321 tacctttagc acacgatgaa aaaaatgtag ctttacatat ggtaagtaaa gaaaatcttt
     4381 tttgggaaac catggaggct ttaaaagaag aaggtgcgag ttcgatttta gttctgccta
     4441 tagaaaaaat gttaaagtga gtaaaaaatg caaattttag tatatgataa tttggatgaa
     4501 aaacaaaaag aagaagcgtt aaaacgccct gctataaatg cgaaagatga aatttcaaaa
     4561 atagtaagtt ctatcattaa agaagtgcaa gaaaaaggcg atgaagcttt gatagaacaa
     4621 gctttgaaat ttgataaggc tgaaatttca aagattaaaa tcactcaaaa agaaatcact
     4681 caagcaagca atcgtttaga taaagattta caagaagcta ttttagtggc ttatgaaaat
     4741 atcaaaaaat ttcacgaagc ccaaatccca catgaaatcg ctcttgaaac tacaaaaggc
     4801 gttaaatgtg aagttttaac acgccctata gaaaaagtag gactttacat accagggggt
     4861 ttagcacctt tgttttcaac ggttttaatg ttagctatcc ctgcaaaaat tgcaggttgt
     4921 gaaaaaatcg ttttagcaag tcctgcaaaa atcaatgatg ccgtgctttt ttgtgctaaa
     4981 ctttgcggcg tggatgaaat ttatcaaatg ggtggtgcag gagctatagc agctttggct
     5041 tatggtacac aaagtgtttt aaaggtggat aaaatttttg gcccaggaaa tgcctttgta
     5101 accgaagcaa aacgtcaagt aagtagcgat ataaacggag cgactattga tatgcaagca
     5161 ggacctagtg aagttttagt aatagctgat gatttggcta atgaaaaatt tgtagctagt
     5221 gatttgcttt cacaagctga acatggtgca gattctcaag tgattttggt gtgtttaagt
     5281 caagattttg ctaaaaaagc aagtgatgaa gtccaaagtc aattagaact tttacctcgc
     5341 aaagaacttg caagcaaaag tattgcgaat tcacgcatta tcatagctaa agatttaaat
     5401 caagccttag aaatttcaaa tctctatgcc cctgaacatt taatcataca aactcaaaat
     5461 ccacgagaac ttttaaaagg tgtaaaacac gcaggatcag tatttttagg agcttattct
     5521 ccagagtcta tgggtgatta tgcaagtggg actaatcatg ttttacctac ttatggactt
     5581 actaaaacgc attctagttt aggtttggca gattttagta aaagaatgac cgttcaagag
     5641 ctaagcaaag aaggcttttt agctttaggt aaaagtgttg aaattttggc acaaaatgag
     5701 catttagacg cacacaaaaa cgctgtaact tttcgtttag agagcttaaa atgagtcaaa
     5761 aaatcctttt tatagataga gatggcactt taatagagga accaaaaagc gattttcaaa
     5821 tcgatactct tgaaaaattg cgttttgaaa aagatgctat tcctactctt ttaaaactaa
     5881 aaaattttgg atttaaattt atcatggtaa gcaatcaaga tggtcttgga acgccgagtt
     5941 ttccaaagga aaattttgaa attgctcatg aaaaaatgct tgatatttta aaaagttgcg
     6001 gtatagaatt tcaagatatt tttatttgtc cgcattttga aaatgaaaat tgtgcttgta
     6061 gaaaacctaa aaccgctatg ttagaagagt atatcaaaca cgaactttat gacaaggagc
     6121 aaagttttgt tataggagat cgtgagagcg atatgatctt agcttcaaat ttaggtgtgc
     6181 gtggtttaag atacggcgaa ctttcttgga aagaaataga aaatgaaatt ttaagttctt
     6241 ttagaagtgc gagttatcaa agaactacca aagaaacaga tataaaagta aaagtgtgct
     6301 taaatggggg caaggttagc attaaaacag gtattgattt ttttgatcac atgttagagc
     6361 aaatcgctgt acatggaggt atagggcttg aaatttcttg caaaggggat ttagaaatcg
     6421 atgagcatca tagcgttgaa gatgtagcct tagcacttgg agcttgcatc aaaaaagcct
     6481 taggggataa aatcggcatt gcaagatatg gttttgcttt acctatggat gagtgtttgg
     6541 caagttgtgc gatggatttt tgcaatcgcc ctcatttagt ctataaagcc aaatttaaaa
     6601 aatctcattt aggagcttta agcacagaaa tgatcgagca ctttttttat tctttaagct
     6661 atgctatggg cgtgagtttg catttaaaag ttaaaggcaa aaatgatcat cataaagctg
     6721 aagggctttt caaagccttt gcaaaagctt tgaaaatggc agtaaaaata gaaagtgaaa
     6781 atttagccag ctctaaagga gtgatatgaa aatcatcatc atcgatacag cctgtgcgaa
     6841 tttggcatct ttgaaatttt gtctggatag attaggtttt aatgcaacta tcagtaggga
     6901 tttaaaagag cttgaaagtg cggataagct ttttttacct ggagtgggta ccgcaaaaga
     6961 agcgatgaaa aatttagaac aatttaatct tattgatttt attaaaaata ccaaaaaacc
     7021 tttacttggt atttgtttag gtatgcaaat tttaggaaat ttttctgaag aattaaatca
     7081 agaaacctta aaacttatag attttacaac ccaaaaattt aaagctaaag aaggctttac
     7141 ttttccacat atgggatgga atcaagttca tagctctcat gctttgttta aaggcttaga
     7201 aggggcttat ttttattttg tgcatagtta ttgtgtagga cttggagaat atactatagc
     7261 agattgtgag tattcgcaaa aatttagcgc aagcgtaatg aaagataatt tttacggggt
     7321 gcaatttcac cctgaaagaa gcagtgaagc gggggaaatt ttaatttcaa attttattaa
     7381 ggatatagga tgactcaaat catacccgca ctcgatctta tagatggcga agtggtgcgt
     7441 cttgtaaaag gggattatga acaaaaaaaa gtatataaat acaatccctt ggaaaaattc
     7501 aaagaatacg aaaaagcagg agcgaaagaa cttcatcttg tagatcttac aggtgcaaaa
     7561 gatcctagca aaagacaact tgctttgata gaaaaattag ccaaagaagt caatgtcaat
     7621 ttgcaagtag gcggaggcat acgctctaaa gaagaagtta aagctttgct tgattgtgga
     7681 gtaaaaagag tagttatagg atctatggcg attaaagatg cgactttatg tcttgaaatt
     7741 ttaaaagaat ttggtagcga agctatagtt ttagccttag atacgatttt aaaagaagat
     7801 tatgttgtgg ctgtaaatgc ttggcaagaa gcaagcgata aaaagcttat ggaagtttta
     7861 gatttttata gcaataaagg cttaaaacac atactttgca cagatatttc aaaagatggc
     7921 accatgcaag gagtaaatgt aagactttac aaacttatcc atgaaatttt tcctaatatt
     7981 tgcattcagg caagtggtgg agtagcgagc ttaaaagacc ttgaaaactt aaaaggaatt
     8041 tgtagtgggg ttatcgtagg aaaagcttta ttagacggag tttttagcgt agaagaagga
     8101 ataagatgct tacaaaacgc ataattgcat gtttagatgt caaagatggc agagtagtaa
     8161 aaggaacaca atttaaaaac cataaagata tgggagatat catagagctt gctaggtatt
     8221 attctcaaaa tggtattgat gagcttgttt tttatgatat tgctgcaagt gctagaaaag
     8281 aacgcatatc aagagaatgg gtaagtgaag tagcaaaaaa tatcaatatt cctttttgtg
     8341 ttgcaggggg tattaaaagc gaagaagatg cagctgaact tttggctaat ggggcagata
     8401 aaatttctat caattctcct gctttaaatg atccaagcct aatcacacgc cttgctaaaa
     8461 gctttggcgt gcaatgcgta gtagtaggga ttgatagctt caaagatgaa aatggaaatt
     8521 taaaagtatt tcaatacaca ggcgatgaaa aaacaagcaa gcatagtgga aaaagcactt
     8581 tagaatgggt taaagaagtg caagatctag gtgcaggcga aattgtttta aatatgatga
     8641 atcaagatgg tgttaaaaat ggctatgatt tagaacaatt aaaagctgta tataaaattt
     8701 gtaaagtacc tttgatcgca agtgggggag cgggaaaaat ggagcatttt ttagaagctt
     8761 ttaaactagg tatagatggg gctttagctg cttctgtttt tcatcaaaaa cttatagaca
     8821 ttaaagaatt aaaaatttat cttaaaaatc aaggtttaag tataaggata taatatgcaa
     8881 aatttcaaag aacttaatga aaaaattgct tggcaaaaag tggatcatct tttacctgtc
     8941 atcatccaag atgcaaaaac ttgtgaagtt ttaatgctag gcttcatgaa taatgaagcc
     9001 ttagaaaaaa gcttagaaag tggcaaagta gtcttttttt cacgcacaaa acaacgtctt
     9061 tggatgaagg gtgaagaaag tggaaatttc ttaaatatcg tagatttaag cttagattgt
     9121 gataatgaca cgcttttaat tttagcaaat cctgtaggat ctacttgtca tacgggcgat
     9181 atttcttgtt ttgaaaaaat ttctaaaaat gcggattttg tttttctagc cagacttgaa
     9241 aagcttatta atgcacgcaa aaatgccgat gaaaatactt cttatacagc aaaacttttc
     9301 aaaagtggca caaaacgcat cgcacaaaaa gttggtgaag aaggcgtaga aacagcttta
     9361 gcagctacag taaaagataa agaagagctt atttgtgaag cagcggattt aatgtatcat
     9421 ttaagtgttt tacttgcaga tgcaaatctt agtttctcag atgtgatttc aaagttgaaa
     9481 gaaagacata aagcttaaag ctttatgtaa ataaatttat atcaatgcaa ggcttcgtta
     9541 agtttgactg cttttttatt taaagctact atcatagcac cgcttataga atcttgacgg
     9601 aaatgtagcc catttaaacc tttaagctct aagcctttgt aaatttcttt atcaaaatta
     9661 aaataaggat taagtttagc aagctcctca gcatctttga gtaaaaattt cgttccttct
     9721 agcactgcaa tacctgcatc aactatacaa ttatccccta aaggaattcc tgtcactgaa
     9781 ttagccccta aaagacaagc cttacctacg cttatagcat tgccacttgt tccacttaaa
     9841 acacctaaaa tcgaagctcc gccacctaca tcagaacctt ctcctactat agcactcgaa
     9901 ctaatacgcc cttcaaccat acaagctcct gttgtacctg cattaaaatt cacataactt
     9961 gcccctggca tgatggttgt tcctgctgct aaagatgcac ccattcttac tttggaactt
    10021 tctaaaattc ttgtattatc ctcagggata atatgcgcta aaaatcttgg aaatttatca
    10081 acaaaatcga tttttggata ttgattgctc atttttaaac gcatttcatt tgctcttaaa
    10141 tactcaagct cgataggttt atcatcgctc caagctacat tgcttaaaag tccaaaagct
    10201 ccatttagat tgatacttct taaaggtact tttttagtag aaagcaaata aagttttaga
    10261 taaacacttt ctacacttaa aggttcttta tcttcaaaaa gacaaacaaa agcaaactca
    10321 tcgtctttaa atttatcttt gataatcttt aataaatcaa tattttgatg cccttcttct
    10381 tctaaaaaag gtttaaaaca agaaagcgca aaatcaatat cttctaattt taaagtttgc
    10441 acaaactcac tcgcattaaa atcaatctcc acaccccttt gcataaaagc ttcaagtatg
    10501 attgccgctg agccaaaatt ttgctcataa ttaatcaaag caaaacttgc ttgtaagatt
    10561 ttatttttat ttaactgtcc tctatcaagc cttgctatac caaaagcttt aggtttttta
    10621 tagccacttt tttgctcaat ttgtttgatt aaaagtaaaa aatcttcttt ggtattaatc
    10681 attttctttt ccttatccac ttaattttta atgcgaacac gcactttttc cattcatcac
    10741 aggttgtata gcagaattat ccgcaccgcc ttcattgtta atcttttcta taaagcccca
    10801 aattttttca gctgctgtta aataacgctt tgaactcaca ctttcagggt gataaaaact
    10861 cacaggcttg ccttcatctc caccttctct tactatcatt tctataggaa tttgtgctaa
    10921 aacttcactt ttataggctt ttgccatatc ctcagccgtt cctttgccaa aaatatcata
    10981 ctctttacca ttatcaggac ataaaaatcc actcatattt tcaatcacac ccgctatagg
    11041 aatgtgaagt ttattaaaca tatctaaagc tcttttacta tcgtctaaag atacggtttg
    11101 aggtgtactt acacaaactc ctgcagtaat aggaatactt tgtgcagaag taatttgcgc
    11161 atcgcctgtt cctggaggca tatccaaaaa caatacatca agttcaggcc aaatcacatc
    11221 agctaaaagc tgctcgattg ctttcataat catagctcca cgccacataa gaccttgacc
    11281 ctcttcgatc aaaaccccca tactcatcat ataaacacca tgagttaaaa taggctttaa
    11341 tctctgccct actacttcag gctgagtttt ggtttcgcct agcattcttg gaatatttgg
    11401 cccataaata tctgcatcta aaatccctac tctttttccc attttagcca tggaaattgc
    11461 taaatttact gtagttgtag atttgcccac accacctttt ccacttgaaa ccatgataaa
    11521 attttttact tgtggagcga tattttttcc acttcttgaa ttgctttttt cttcaggaat
    11581 ttttggagta atgatattaa gttcaatatt ttttaaagcc aaactcgata aagcttcagt
    11641 ggcattttta cgaatttcat tagctacttc aggatttgct gaaacgattt ctatatcaat
    11701 aaatacacca tcatcttgaa ttttaatatc ttttacaaag ttaaaactca ctatatcctt
    11761 ttcaaaacca ggatatttta cagtttttag cttctctaaa atttgttctt tcatgttttt
    11821 tccttgtctt ttaaaaaaat caattttact aataaaatga taaaatttag ctttttataa
    11881 gtgtataata tggtaacatt ataaaaacca acaatattaa aaagaggaat gaaaaaatga
    11941 gtgaaattag cctcattatg ttagcagctg gaaattctac tcgttttaac acaaaggtaa
    12001 aaaaacaatt tttacgactt ggaaatgacc ctctttggct ttatgcaaca aaaaatttaa
    12061 gctcttttta tccttttaaa aaaatagttg ttacctctag taatatcact tatatgaaaa
    12121 aatttactaa aaactatgaa ttcatagaag gtggtgatac cagagcagaa tccttaaaaa
    12181 aagccttaga gctcatagat agcgaatttg ttatggtaag tgatgtagca agggtattgg
    12241 tgagtaaaaa tttgtttgat cgtttgattg aaaatttaga taaagcagat tgtattaccc
    12301 ctgctttaaa agttgcagat acaacacttt ttgacaatga agccttgcaa agagaaaaaa
    12361 tcaaactcat tcaaaccccg caaatttcta aaaccaaatt gcttaaaaaa gccttggatc
    12421 aaaacctaga atttacagat gatagcacag ctatagctgc aatgggtgga aaaatttggt
    12481 ttgttgaagg tgaagaaaat gcaagaaaac taacctttaa agaagatctt aaaaagcttg
    12541 atttgcctac acctagcttt gaaattttta ctggcaatgg ttttgatgtg catgaatttg
    12601 gagagaatcg ccctttgctt ttagcaggag tgcaaattca tcctactatg gggcttaaag
    12661 cacacagcga tggagatgtt ttagctcact ctttaaccga tgcgatttta ggtgctgcag
    12721 gacttggaga tataggagag ctttatcctg atactgatat gaaatttaaa aatgccaact
    12781 ccatggagct tttaaaacag gcttatgata aagtcagaga agtaggtttt gaactcatta
    12841 atatagacat ttgcgtcatg gcacaaagcc ctaaacttaa agactttaaa caagctatgc
    12901 aaagcaatat agctcatact ttagatttag atgaatttag aatcaatgtt aaagccacaa
    12961 caacggaaaa attgggtttt attggaagaa aagaaggtat ggcggtgctt agtagtgtaa
    13021 atttaaaata ttttgattgg acaagattat gaaagtttta attattgaaa atgaaattta
    13081 tctagcacaa agcattagca ttaaactaag tgatgctgga tatagctgtg aaattatcaa
    13141 ctcgtttgat gaatacaatg gtgaaaaata ctatgatatt gtactgcttt ctacaaatac
    13201 taataatttt ctaaaagccg taggtcagtt taaacatagt attattattt tgcttatttc
    13261 ttatataagt acagatacag tttcaaatcc tttgaaatta ggtgctagtg attatattca
    13321 aaaacccttt atgatagaag agctgattag aaaaataaag cattatcagg attttagaaa
    13381 actttcaatc cttaataaag cttatcaaag ctacatcaaa tcaagattag aaacaatcaa
    13441 aattccagag tataattata aaaaattaaa acttccattg atattaaaat ccaacaagca
    13501 aagcagtgct gatgcttttg tttttaatta tgcaaatgaa tgtgacatta ctctttcttt
    13561 tattgattta acatctacaa attcagttga aaaagttatg aaacttccca cagaaaacaa
    13621 tctcttattt ttgagtaatt ttcaagcatt aaaagcaaca gaaaaggaaa aactcctaga
    13681 ttttatacaa aacaaaaatg ttattttgca taccaattca aatacagatg atttaaaaat
    13741 aaactgcatt aatttaaatg ataatgaaaa aaatatcgat agcaatgaaa ttttaaccat
    13801 agatgagtat gtaaaatatg ttattataaa ttaccaaaat atatttcctg atactgatct
    13861 ttcaaaaaaa ttaggcattt cacgtaaatc tttatgggaa aaaaggaaga aatatgaaat
    13921 cagcaagaaa aaataaaaac attaccatag atcaaaatga atttggcatc ttgtcactta
    13981 ttaaagaagg tttgctaggt acttgcactc atttaatgaa tgaaaaagaa gtcaatgaaa
    14041 tcattaaatc aggaaaattt aaaggagaaa gttttcccta tcccttaagc tttgcaccaa
    14101 aaaatgctga agaagcacta aatgatataa aatctggcga tagaatcgat ctcatactag
    14161 acgaaaaagt agtaggacat atagatttta aaagccgatt taaaaataat aaaaattttt
    14221 ctgatatttt cagtcctaac acttgctctt tggaagatat gggaacaact tgtataagtg
    14281 gaaaaataga aatttacaat tctcaaatta aaaaaataaa agaaaatttt caacaaatca
    14341 aaaacaatct taatgcacaa aaaattaccg ctatagtttc aagttttgat cctttgcatc
    14401 gtgcccatga aagaatgttt cgttggacta ttgataaagc agatttagtt gtaatttttc
    14461 ttgtagaatc ttttgatgca aatgggtttg aattcgaact taaagaagct tatttgaaaa
    14521 aatttattca aaactatctt ccaccggata gaattttcat ttttccatta aaaaatatta
    14581 atatttttca cgctcattta aatcctggct tagaaagcat tatcgcaaaa agtctaggtt
    14641 gtaccaaact agtagtagga caaaatcata caggacttgg aatgttttat gatgataatc
    14701 aaccaaaaac catacttgat gatttttcca aggattatgg catagaagtg attgttttgc
    14761 ctgaatttgt attttgcgat caatgtcgca tgattgttag cacaagatct tgccctcatg
    14821 gttgtcatca ccatttgcac tataattctc agtctttaaa agatttacta agagcgggta
    14881 tcattcctcc agcaattttc atgcgcaagg aagtatctag cgttatttta acttctcttt
    14941 ttccaaatag attaaaaaat atgcaaaaaa tttataatga gctttttcca actgatggaa
    15001 ttttagaata caaaaatgat gaagaatttt atcaaaaact tttagaaatt catcaaatgt
    15061 cttatatggt gtaacaaaat gcaaaaatta tttttaactt ttttttattc aggttctata
    15121 aaaaaggcaa gtgggacttt tggtactatc gctgctttaa tacctgcttt ttttatactt
    15181 aaatatcttg ggattaatac tttgttttta ctaagtattt taatttttgt tgcaagtatt
    15241 cgtgttatag atgattatga aaaaaaaaca ggaattcacg atgacaaaca catagttatc
    15301 gatgaagttg ctggggtttt tcttgcttgt gctattgcag caagtgttga aaattcaata
    15361 gttaatttta ttttggcttt tgttttattt agactctttg acattacaaa accttctatt
    15421 attggcaaaa tagataaaaa agtcaaaggc ggactaggtg taatgcttga tgatatgcta
    15481 gcaggattgt ttgctggact tttaagtgcg gtaatttatg gatttttact taaatttaat
    15541 ttagtttttt gggatataaa tttaaaagat ttattttgaa attttgctta a
//
LOCUS       DARBAC010000034        15419 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.034, whole genome shotgun sequence.
ACCESSION   DARBAC010000034 DARBAC010000000
VERSION     DARBAC010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15419
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.034"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            146..1927
                     /locus_tag="SB799_000794"
     CDS             146..1927
                     /locus_tag="SB799_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HEG0868047.1"
                     /translation="MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDESKIIDMNAVKNAHLVFGDNDDGMSFFP
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGVAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDF
                     FGSSDENLEFNDSLKRYGFNKTSLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDVK
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGADTSKI
                     LDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVMMIRKLDGGVIGS"
     gene            complement(1965..2903)
                     /gene="trxB"
                     /locus_tag="SB799_000795"
     CDS             complement(1965..2903)
                     /gene="trxB"
                     /locus_tag="SB799_000795"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEG0868048.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWNEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIKLITSASVDEVYGDKMGVTGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCNMEEAGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3037..3351)
                     /gene="trxA"
                     /locus_tag="SB799_000796"
     CDS             complement(3037..3351)
                     /gene="trxA"
                     /locus_tag="SB799_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEG0868049.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3408..3746)
                     /locus_tag="SB799_000797"
     CDS             complement(3408..3746)
                     /locus_tag="SB799_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEG0868050.1"
                     /translation="MGLKAYLDGILGEDKACKFLKKQGFEILKRNFHSKFGEIDIIAK
                     KDGILHFIEVKFTQNDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKND
                     VIQFCENISF"
     gene            complement(3746..4993)
                     /locus_tag="SB799_000798"
     CDS             complement(3746..4993)
                     /locus_tag="SB799_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEG0868051.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVEEILNADVDVFVELMGGVDEAFKIVNEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFEQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYELLSKDEIYT
                     KYYLRVKVEDKIGVLSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRIE"
     gene            complement(4997..6199)
                     /locus_tag="SB799_000799"
     CDS             complement(4997..6199)
                     /locus_tag="SB799_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEG0868052.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPD
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVAATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(6211..7017)
                     /locus_tag="SB799_000800"
     CDS             complement(6211..7017)
                     /locus_tag="SB799_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868053.1"
                     /translation="MVKKIIILTLWVNISFAISSLELAKNLVNNSSKNSQLELLFSNN
                     SYIDNNGNCDIAKISQILKTNSLIALTLSNPQSLRLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYINNIKRIRAYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(7011..7949)
                     /locus_tag="SB799_000801"
     CDS             complement(7011..7949)
                     /locus_tag="SB799_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868054.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSSNAWPFLIV
                     LIVLVIIGSGIYYFDTLKTFFKDEQNNTSATVIDIIGQAQENLKSLGGNNVVVIDNNK
                     AQETNQTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTPKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPAGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(7942..8625)
                     /gene="rlmB"
                     /locus_tag="SB799_000802"
     CDS             complement(7942..8625)
                     /gene="rlmB"
                     /locus_tag="SB799_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEG0868055.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKTTFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(8639..9463)
                     /gene="rsmI"
                     /locus_tag="SB799_000803"
     CDS             complement(8639..9463)
                     /gene="rsmI"
                     /locus_tag="SB799_000803"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEG0868056.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDSQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELPLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(9466..9666)
                     /gene="rpmE"
                     /locus_tag="SB799_000804"
     CDS             complement(9466..9666)
                     /gene="rpmE"
                     /locus_tag="SB799_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEG0868057.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9745..10401)
                     /locus_tag="SB799_000805"
     CDS             complement(9745..10401)
                     /locus_tag="SB799_000805"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEG0868058.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(10403..10810)
                     /locus_tag="SB799_000806"
     CDS             complement(10403..10810)
                     /locus_tag="SB799_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868059.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(10810..11235)
                     /locus_tag="SB799_000807"
     CDS             complement(10810..11235)
                     /locus_tag="SB799_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEG0868060.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSLDDEHEANPTIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLGNKIFIQKIKMIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(11235..11816)
                     /locus_tag="SB799_000808"
     CDS             complement(11235..11816)
                     /locus_tag="SB799_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEG0868061.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMSKISLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(11813..12556)
                     /locus_tag="SB799_000809"
     CDS             complement(11813..12556)
                     /locus_tag="SB799_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEG0868062.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKQDFDPIVVITGGEPLIHYENP
                     EFIKFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12559..13521)
                     /gene="moaA"
                     /locus_tag="SB799_000810"
     CDS             complement(12559..13521)
                     /gene="moaA"
                     /locus_tag="SB799_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEG0868063.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(13534..14049)
                     /locus_tag="SB799_000811"
     CDS             complement(13534..14049)
                     /locus_tag="SB799_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868064.1"
                     /translation="MSDDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(14046..14543)
                     /locus_tag="SB799_000812"
     CDS             complement(14046..14543)
                     /locus_tag="SB799_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868065.1"
                     /translation="MELTLFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(14534..15418)
                     /locus_tag="SB799_000813"
     CDS             complement(14534..15418)
                     /locus_tag="SB799_000813"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HEG0868066.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NVLIFISCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKVGLHSIPAKFGSKATLFISAF
                     CHILAVLFWLLFVWEVWGIALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
BASE COUNT         5195 a         2502 c         2018 g         5704 t
ORIGIN      
        1 aaaagatttt aattaatcat ttatacctag tgaaaaacta ggtataaatt tttccttcaa
       61 tttaaatttt catcaaagtt tctaaaaagt ttccaaatat ttttatactt ccattgtttt
      121 aaattttaat atggagtaaa aacaaatgga aagaagattg tttttaaaag gttcagcttt
      181 aggttctatg gtggcttttt ttgcaagttc aaatttaagt gctgctatgc ttaaggataa
      241 ggatttgcta ggttttaaag ctgttagtgc aagcacgcaa gataaagtta tagtaccaca
      301 aggttatgaa gcaaaggttt taatttcttg gggtgatcca ctttttagta aagcaaaacc
      361 ttatgatgaa agtaaaatca tcgatatgaa tgcagttaaa aatgctcatt tggtttttgg
      421 agataacgat gatggtatga gtttttttcc actttcaaaa aacagaggaa ttttagccgt
      481 taataatgaa tatataaatc ctgaaatcat gtttaatcat catggtaaaa atttaagcaa
      541 agaagatgtt ttatacgagc aagctagtgt aggtgtaagt atcttagaaa tcgaaaaaaa
      601 gggtgatgat tggactgtgg ttttagactc taaatataat cgcagaatcg atgcaaacac
      661 taaaatgcaa gtaagtggag tagctaaaaa agaagtttta aaaaatgaaa aatttgttca
      721 tggaactttt gcaaattgtg caaatggaca aacaccttgg ggaacttata tcacctgtga
      781 agaaaatttt gacgattttt ttggaagttc agatgaaaat ctagaattta atgactctct
      841 taagcgctat ggatttaaca aaactagtct ttatggatgg gaaaaatttg atgaaagatt
      901 tgatttagct aaaaatatcg atgaagccaa tcgttttggt tggatagtgg aaatcaatcc
      961 ttttgatgta aaaagcacac ctgttaaaag aacttcttta ggtcgtttta aacatgaaaa
     1021 tgcagaaatt atcgtagaaa aagatggttc tgttatagtt tatatgggtg atgatgagat
     1081 gaatgaattt atttataaat ttgttagcaa acataaatac aaaaaaggtg ctgatacaag
     1141 taaaatttta gatgaaggca ctttgtatgt aggacagttt aacggcaagg tgggagattt
     1201 taaaggacag ggaaaatgga tagccttaga atatggcaaa aacggcctag atgaaaaaaa
     1261 tggttttaag tctcaagctc aagtactcat taatacgcgt cttgctgcaa gcattgtagg
     1321 tgcaactcct atggatagat gtgaatggat agcaagtcat aaacaaagtg gttctaaaga
     1381 agtatttgca acactaacaa ataataaaaa tcgccaagaa cctaatgcag caaatccaag
     1441 aactaaaaat gtttatggac aaattttaaa atggatgcca aaaaattctc ataaagacga
     1501 tgattttact tgggaaattt ttgctcttgc tggaaatcct gataaccaac aaggcttata
     1561 taaaggctca aataatatta caagtgaaaa taaattcaat tctcctgatg gacttaaatt
     1621 tgatagagat ggaagacttt ggatacaaac agatggatct tattctaata aagatgaata
     1681 cgaaggcatg ggaaataact gcatgttagc agcaaatcca aaaacagggg aaatcagacg
     1741 ttttttaaca ggacctattg cttgtgaatt aacagggatt gcttttagtg aggattatac
     1801 cacaatgttt gtaggtatac aacatccagg agaaggttta aaaggtagta cttttcctta
     1861 tggaaaaacg ccaagatcga gtgtaatgat gataagaaaa cttgatggtg gagtgatagg
     1921 aagctaaata aaaataaagt tgcttttagc aactttataa aatcttaatg taagctttct
     1981 atataagcca tagcacttaa tgcagctaca gctccatcac ctgcagcaca aataacttgc
     2041 ttaggtgcat cttttctaag atctcctgcg gcaaaaagtc cagcaacgct agtttgcatt
     2101 ttaagatcaa cacttacttg cccagcttct tccatattgc ataaaaactt accatcgtct
     2161 tgttttaaaa tttcatttct tacattaaga ccaacaaaag taaaaattcc tggaacattt
     2221 aaatctctaa tactaccatc ttttaatttt acttttacac cagtaacacc cattttatca
     2281 ccatatactt catctacgct tgcactagta atgagtttta ttttttcatt tttcttaact
     2341 ttttctactg tagatggagc tgctctaaat tcatctctgc ggtggataag ataaacttta
     2401 gaacaaatat ttgctagata caaagcttct tctaaagccg tatctccacc acctaaaact
     2461 gcaacttctt tatttttata aaaaaatcca tcacaagttg cacaagtgct tacacctttt
     2521 ccaaaaaatt catcttcgcc tttaaaacct gctctttttg gagctgaacc tgtacaaact
     2581 atcacagctt tagcaagttc tgttttgcca ccttctaatt tgatggtaaa acttccatca
     2641 ctatttttta aaatttgctc tactccaacc atttcatgtt ttaaaccaaa acgcatacat
     2701 tgttcattcc aaggagccat aaaagaaatt ccatccataa cttgggctac acctggataa
     2761 ttttctattt cagaacttga ggtaatttgt ccaccaggca tacctttttc aaacattact
     2821 acattcttaa gaccacctct agttgcataa agtccggcac taagtccagc aggacctcca
     2881 cctatgattg ctacatctaa catttacatt tcctttatat tgaattttat tattaataat
     2941 gatataaaaa ttattcttaa tagtagttaa taaaaattat tatttagtat aaatttgaaa
     3001 tttttaagaa gaaggctagt tatactagcc tttagtttat agtaaagagt ttagtttatc
     3061 actaattgct tgtttagatt gtgcaccaac gagttgatct acaacttcac catttttaaa
     3121 gaaaataagt gtaggaatag agcgaacacc aaattcagct gctaaatcac cttgttcatc
     3181 tgtatttact ttgcaaattt tagctttacc atcgaagtca tttgcaagtt catcaataac
     3241 tggagcaagc attctacaag gtccgcacca tggagcccaa aaatcaacta aagctacacc
     3301 ttcttttgct tgagcaaaat tatcacttgt taattcaata tattttccca taatttttcc
     3361 tttctttaat ttttgtctaa ttgtatttta tttttttaaa tatcagctta aaaacttata
     3421 ttttcgcaaa attgtatcac atcattttta atgcaaatca gatcaatctg aaaatccgat
     3481 gaaattccat ttttaagatg ataaaattct atagttttta aaattttttc aagttttttt
     3541 ctatccaaac gctcggaaac ttcataatca ttttgagtaa atttaacctc tataaaatgt
     3601 aaaattccat cttttttggc tattatatcg atttctccaa atttagaatg gaaatttctt
     3661 tttaaaattt caaagccttg tttttttaaa aatttacaag ccttatcttc acctaaaatt
     3721 ccatctaaat aagcttttaa acccattatt ctatacgcat cataaaaggt ttggttttta
     3781 taaaatcttg tttgcgtaaa atttcaagca aattttgtat gcttttttca taagttaaat
     3841 gtgtagtaaa aaacaaagta ctgtaatttt catcattttt tttaggtttt tgtaaaaaac
     3901 tatcgataga aatattattt tcactcatca attgtgtgat tttagataaa acccctattt
     3961 tatcttcaac tttcaccctt aaataatatt ttgtataaat ttcatctttg cttaaaagct
     4021 cgtattctaa agtattcaca aaaccaagca ttggtgcttt tacctgatct cttgctatat
     4081 ccataagatc tgaaatcaca gcacttgcag tggcctctcc tcctgctcct gctccataat
     4141 acaaactttc acccaacaaa tctccattaa tgcttatagc attcatcact ccatcaactt
     4201 ttgcaagcat tttttcttta tctatcatag taggatgcac tcttaattct actttatttt
     4261 cacgcacctt agctatacct aaaagtttta tggtaaattc aaactcatta gcaaaataca
     4321 tatcttcagg tgcaatttca ctaataccct cgatcaaaat atcttcaggt ttagctttaa
     4381 gattataagc gatacttgat aaaacaagta gtttatgtgc tgcatcttgc ccttctatgt
     4441 caaaagttgg atcagcctct gcataaccta aattttgagc tatttgtaag gcttgttcaa
     4501 aactcatatt tttttgactc atagaactta aaatataatt actcgtacca tttaaaatcc
     4561 cttttatagc caaaatatta tttgcactta aaccttcttt taaaaccttg ataataggaa
     4621 ttcctccagc tacacttgct tcataaccaa aagctaaatt tttagccaaa ttttcaagct
     4681 cataacgatg ataagcaagc atagctttat ttgcagtaac aacagctttt ttctttttta
     4741 aaatttcatt cactatttta aaagcttcat ccaccccacc cattaattct acaaaaacat
     4801 ctacatcagc atttaaaatt tcttcaacac tgtgagtaat tggaattaaa gcattttttt
     4861 taggacttct agcaagagcg atcacaggag tgatactttg tccacatctt gcacgaatga
     4921 gtttatcatt ttctaaaaga aatttaacca ccgcacttcc aacagtgcca taaccaagaa
     4981 tcgctacttt cataacttat tcttttaaat attttttgat attgcgtgca gcttggcgta
     5041 tgcgattttc attttcaatt aaagcaattc ttacatactc atcacctgct tcgccaaaac
     5101 ctaccccagg acttactgca acactagcac gttgtaaaag ttgctttgaa aattctaaac
     5161 tttttaaatg tcttttgctt tcagggagtt ttgcccaaac aaacatactt gctcttggtt
     5221 tttgaagttt ccagcctgca ttttcaaaag cttcaagtaa aatgtgcatt cttttatcat
     5281 aagttgcacg gatttcatcc acacaagttt gatctccatc taaagctatg gtagctgcta
     5341 cttgaatagg tgtgtacata ccataatcaa accaagattt tattttttta agcgcactga
     5401 ctaagcgttt atttcctact acaaaaccta cacgccagcc tgccatattg taagattttg
     5461 aaagagtgta agtttctacc gctacatctt ttgcgccttc aatttccaaa atagaaggag
     5521 ttttatagtc atcataagtt aaatctgcat aagcaatatc tgaaataata taaaatcttt
     5581 ctttttttgc cgttgctatc aatctttcat aaaaactttt ctcacaagtt actgttgttg
     5641 gattatgcgg gaaattaaca acgacatatt ttggacgcgg gatgctttca tttaaagttt
     5701 tatgcaaatt ttcaaaaaat tgattttcat caagctcaaa tttttcatta taagctaaag
     5761 gcatttttgc tacattacct cctgctataa taaaagcttg agtatgtata ggataagcag
     5821 gagttggtac aatagcaaca tctccaggat ttataatcgc tcttgcaaga tttacaaaac
     5881 cctcttttga acccatggta gctacaactt cattttcagg atctagatta acattatatt
     5941 ttcttttata ccaattacaa attgctaagc gaagtttata aatccccatg gaagtagaat
     6001 atcccgaggt tttatctttg ttagcacttt cacaaagttt atctataatg tgttgtggag
     6061 ttttaccatc gggatttccc attgaaaagt cgatgatatc ctctccagca cgtcttgctg
     6121 ccatttttat cgcatttacc tctgcgaaaa cataatttgg aagtctttct atggtattaa
     6181 aacggatttc atcaaacatt tcttaatcct ttatttttta agtgtgattt ttaaacccct
     6241 acgtatatta tctaaactat acatatcgct tacaatagca tatatagcac catttggaat
     6301 aagttctgaa aaatgattat ttttattttc gctttttact gctttaatta gatttagatt
     6361 tttatctaaa aagaagattt taggaaacca attgtctaaa tcatttgcat caataatcaa
     6421 atttgtagca ttttttaaat caagcacata gtctttaagg ggcttttcta atgattttgg
     6481 agtatttaaa ttaacatttg tattggtttt taatacagca ttggaaaaat ttaaatcata
     6541 ttcatagtca tatgccctaa tacgcttaat attatttata tagacagaat tttcttttaa
     6601 gagattgtaa agcgttccag gatctaaaac atattgagat tctacttgta tggtatagtc
     6661 aatatttcct tctcttaaaa tcaaatctgt agggataaaa tatatatatc cagcatctgt
     6721 taaaacatcg gataaaattt taaaaaacat aacttcatca gcttttgctt taaaatttag
     6781 tcttagactt tgaggatttg atagtgttaa ggcaattaaa gaattggttt ttaatatttg
     6841 agatattttt gcaatatcac aatttccatt attatctatg taagaattat ttgaaaataa
     6901 taattctagt tgagaatttt tactagaatt gtttactaaa ttttttgcta attcaagact
     6961 tgagattgca aaagatatat taacccaaag agtaagaata ataatttttt ttaccattct
     7021 ttacctttat ttaattttac aaattcagca gctgaaatac ttgtaatttt tccatcttta
     7081 atcaagaaac gttttgaaat tcctgcagga aatttttgtt ctttattttc ttgatcaaac
     7141 attgttaaag ctgcagcccc tgttaaaatt aactgatctt tatctaaaga aatattaaaa
     7201 tctttttctt taacaaagct tgttttttta agacttttta aatctattaa acctatccaa
     7261 atcttggtag aggttttaaa atgtgcttct tttaaagaat cagtttttgg tgtatttgtg
     7321 tcttcttgga tttgggtatt tttttcttca tcgagtagag ttgtgttatt ttcactgata
     7381 ttattttcta tgcttatgtt tttatcattt tcttgtaatg agatgttttg gcttggtaaa
     7441 acgctctctg tttgatttgt ttcttgtgct ttattgttgt ctataacaac aacattgttt
     7501 ccacctaaag attttaaatt ttcttgtgct tgtcctatga tatctataac tgttgcgcta
     7561 gtattatttt gttcatcttt gaaaaaagtt ttaagtgtat caaaataata aattccactt
     7621 cctataatca ctaaaacaat aagaacaatc aaaaaaggcc aagcgttaga ggatttttga
     7681 ctataagcat ctagttttgg ggttatcatt tttgattttg tttgtggagt aggattgttt
     7741 tcgttaagat aagcttcata ctcttcgtta aaatcactaa agtcgagttc gtattctctg
     7801 ctcaaaattt taacaaaacc tttaacatta aaacgactta aaacagcaaa attcttttct
     7861 actaaagctt caagaaaatc aagttcaatt tgcgtttttg ctgcaacttc ttttaaattt
     7921 aattcttgta tttttttcca attaagcatt taacatccta tcacaaagta ttgcaaaagc
     7981 agcgctgaca ttaagactat caaaattatt tttcatcgca atgcccacac attcatcgca
     8041 tttttttaca attttagagc ttaaaccaaa accctcacta cccaaaacta aaactttttt
     8101 accattgctt atttttacac tgtgaatttc ttttcccgag ccatcactcg cataaaaata
     8161 aaaacctact tgttttagtt catttattac acttaaagca tcgttgctta tcacaatagg
     8221 taaatcaaga gccgctccgc tgcttgtgcg aattactcct tccatggcta atttttcacc
     8281 aataaaaatt aaagccccaa cccctaaagc ataagctgta cgcgtgatag cccctatatt
     8341 tcctacatcg ctaattccat aaagcataac aataaaatca ttttttttga tctcatttaa
     8401 attcgcaaaa gaactttctt taatatctag caaaaaacct tgatgatttc cacctttcgc
     8461 ataagcttga gcagttttaa aatcaagttt tttgatttta aaacctgatt ttgcgatttt
     8521 ggaaaaagta gttttatcac attcttttgc taaataaagc tcattgatac agtctttatg
     8581 atattctaaa atataaaaaa atatttgctt cccataaact atcatattaa aattttacct
     8641 aatcttgact taaaagcagt ttttgataaa tttcttttgc attttttcca ttgatctttg
     8701 ataataattt tgcttttgct tttaaaggca gctctaaatc cataatatct ttttcacaaa
     8761 gagtattttg caaaaaattt tgctcttttg attgcaatac tacaacccat tcaccgttta
     8821 aattagactt ttttaaaatt tcagaaagct ctttagcatt gcctttaaat tttttttcaa
     8881 attttttact gatttcttta atcaaaaaaa tttctctttg gctgtctaga atcataattt
     8941 gttctactaa agataaaata cgtttggggg attcgtaaat aatacttgga taaggaaagt
     9001 ttaaaatttt ttctatatct ttttgtcttt ctttgccttt atttgctaaa aaaccaataa
     9061 agataaattc tttttgacaa aatgccgagc ttacaagagc aactaaggct gcatttgcac
     9121 ctggtaaaat ttcataggtg atattatttt cttgtgcaaa ttctaccaaa gccttgccag
     9181 gatcactaat ccctggcatt cctgcatcgc ttaaataagc tacatttttt tcaaatatct
     9241 ttaaatcaat acttgctaaa acttcttttt cattatggga gtgtaaggct ataaatttag
     9301 aaatatgtat atcagtgtga aatttggtat ttaataacga aatcaaagac ttacttactc
     9361 ttgtatcttc gcaaaacaca agatcgcaag tctttaaaag ttctaaggct ctaaaagaaa
     9421 tatcgcttaa atttcctatg ggagtaggaa taaaataaag cataattatt gcattgcgta
     9481 ttttttctta aatttctcta cacgacctgc agcatctaca attttttcac tgcctgtaaa
     9541 aaaaggatgg caatttgaac aaatatctac tcttaattct gctttgtttg actttgttgt
     9601 aaaagtattt ccacaagcac aacttacttt gcattctaca tattctgggt gaatttcttt
     9661 tttcattagt tttccttaaa aattaaaaca ataagccgtg attataaatt atttaacata
     9721 aaaaagagat taatttaaga aaagttaaag caaaattttt gaagctatag ctataatagc
     9781 tgtttgactt tttagaatat tagagctttt aagagagatt ttccggttaa acaataatct
     9841 ctcatcattg ttaaatccac cttcaggacc tataaaatat aattcttttt catcgaaatg
     9901 actttgttgt tctccttgaa aatcaaccat aattgcattt ggaaattttt gaacaaattc
     9961 ttgagtgctt tggtggataa ttaaatccat tttagtattt ctaccgcatt gttcacaaga
    10021 agaaataatg attttttcaa atctttctaa atcgatttta aaatttcttt gtgaaaaatt
    10081 tgtaaaaacc aaatgtaact tttttactcc aagttcattt aagaaaggta gagttttttc
    10141 taaaatttta atatctataa tggctaaggc taagtttaat tcactttgtt ttatattttg
    10201 tgattttttg tttaaaaatt ttaaagtgca agaatttctt gttaaatttg tgattgtata
    10261 gttgtaaaga aaattatctt gtaaatttct aagatttagc tccgaatttt cctttactct
    10321 tcttactttt aaatgattaa agttttctcc ttgaagttgt ataaactctt ctccagcttg
    10381 cttgttatac aaaaattgca ttttatagat atctttctat taaaaaaggc aaaaacaata
    10441 aaaaaatttc aaaaggtaaa atcaaacaac taatccatct aaaagtggca tattttctaa
    10501 atcttcttgc ttttttaaaa caaacaaagt gaaaaattgc taaggcaaaa attaagatcc
    10561 aagaaaaaat cattacccag atattgacat tcatttgaaa ttgtttcatt gctgataaca
    10621 agcaacctgt aaaaataatc aaagctaaaa ataaataata aattggtaaa aataatcgta
    10681 ttctgcgaat aaaaatgaat tcggttttaa aatttccttg tgttagtata agataaaaaa
    10741 gcattaaaaa accgctcgca taaagactat aaagatgtaa agctaaaaag aattcgtaac
    10801 tttgatccat tattttcctt tgtttataaa atcagctaaa ttttgaattt gttcatcact
    10861 taaaaaacta tggtttttat cttttatcat ttttattttt tgtataaaaa ttttattgcc
    10921 taaggtttta atggccgtgc tgtttttagg ttttaattcc cctttttctc catgacaagt
    10981 ggcgcatttt tgtttatata aagagttgat aatagtagga ttggcttcat gctcatcatc
    11041 taaactttgt gcttcatcat ctacaggtaa aggcaggttg gagtcactta attctgtttt
    11101 ttcatcgttt tgttctattt ggactacttc ttgatctgta ttttgagtct tggaaatatt
    11161 tttttcatca ttagaacagg cagataaaac taataaaaaa aaacttaagg caattaaaat
    11221 tttagctttt tgcattaaat ctcctttgga tttataaaaa tttcttcatt ttttaatttg
    11281 ttataaaaat ctatatcatt ccattctgct ttaatgccat tggaaaattc tatgtcttga
    11341 agtgaaattt ttgacattag ctcactatag gcatcttctc taaaaccttg tgcatagcct
    11401 gttcttgttt catgaacaat gatgctttgt aaagtcactc cttgttctcc atttaccatt
    11461 tttgtttgtt ttaataaagc atctataagt atgaaaaata cgcgacaaaa attttcagca
    11521 cttacattaa caggcaggca aatccaacga cttgaatatt ttttcatttc ttctaaatat
    11581 tttgcgtcat catatttaaa aagagtgata gcatgatcaa aactatcaat aatttggcgt
    11641 atataggttt ttaaaagtcc aaaatcatag accattccag cattatctaa atatttgctt
    11701 tcaagtaaaa cttcaacttt gtaagaatgt ccatgaatgc tacttttgca acgcttagaa
    11761 gaacaaaatc taacaatgtg tgcgttttca aattcaaata attttcttat aatcatacac
    11821 cctctttatc gttccaaaga cgaatatgaa ttctatcaga ataattataa ccattcttaa
    11881 tacaaaattc agcaattttt tgagcatttt ttttaaggtt ttgctcattt tcacccatag
    11941 gcatacaaaa aatttgattt ggagcttctt ttagaatttc attgatttct aaaaatgaat
    12001 tatcaagagt attggcatct aaaacaaatt tataaaaact atcttttgcg taatttttaa
    12061 atgcttttaa agctttaaaa tttaatcgtt tatctttttt tatcccacta ttttggagtt
    12121 taacgcttaa agcaaaaata cattctttgt aaaaaggata tctatcaaaa tcaatttcta
    12181 tgcttccatt gctttcaaag tgtatttcaa atttattttt taataacatt tggataaatt
    12241 ttataaattc aggattttca taatggatta atggctctcc acctgtgata acaactatag
    12301 gatcaaagtc ttgttttaat tttatcactc tttttaaaag ttcattagca tttaaagttt
    12361 cataactttc tttaaaatct tttgtgaaaa cagctcttat cgtgtcacat ccaatgagag
    12421 ttttatcgtt ttttgatatt tttacattaa aacctaaaca gttgaaattg caaccagcaa
    12481 aacgcataaa aatagctaat tttccattat atttgccttc tccttgaatg cttaagaaac
    12541 tttcaacaag ttgcaaaatt aacctccagt ttgataaaaa gcacgagatg aggtttcatt
    12601 atcaacaaca ctccatttat ttttttctgg tttatttctt aatacttctt gtaatatttc
    12661 tacagcggct ttaatatcac cttttcgaac cgcttctttt atgcttaatg cttcatcaaa
    12721 ataaaggcaa ggtattaaca agccttcagc acttaagcgt atgcgattgc aagaatcgca
    12781 aaattcatgg ctatgaggat ctataattcc aaattcataa tcatctgcct tgtaaatact
    12841 cacaggtgct ttttcatctt tttttataag ttgaatttga tatttttgac tcaaaatttg
    12901 tataatttca tctcttttta atccttgtaa tttaccataa gcatgagtat tttccataaa
    12961 ttctataaag cgaatttgag ctttttttga ttttgcaaat tccaaaagag atatcagttc
    13021 atcatcgttt aaatttttaa gagctacagt attaagtttt actttcaaat ctagatttaa
    13081 agcttcatca attccagata aaacactatc taatacatct ttttgcgcaa gagtttttgc
    13141 ttttttgtga tctagggtat caagtgaaat attaagtcgt ttaagtccag cattttttag
    13201 gtctttagca aagtctttta gtaaaaatcc atttgtagtt atagcaaggt caatatcgct
    13261 tttataatcg ctaatcattt ttataaaaat acttaaatct tttcttaata aaggttctcc
    13321 acctgttata cggatttttt caattccttc gtctatagct gctttaacaa ataaaaaaag
    13381 ttcttcgaag cttaataaat tttcttttgg ctgataatcg aaaggaattt ttggcataca
    13441 ataaaggcag cgaaagttac atctttgtgt aactgaaatt ctaagataat ttatctttct
    13501 accgaattga tctataagca tttattttcc attctatttt attaatttct taaattttaa
    13561 gacaagttct acatttccag tgccaatgcg taaatcttta gcgatttgtt ctatgctttt
    13621 tccttctttg aaaagatttt ctattttttg ttcttctgta tcgtaatttg gtgtaagttt
    13681 agccatgctt tgtgcttttt gttccaaatt taaaagacga ttttgttgtt cattttgaaa
    13741 atcttctatg atatgttcca tagtttttag tgttcttaaa acaggagtga tttttgaact
    13801 gatttgttta tcaagttcaa tcataatttc ttcttttaaa agagaggttt tatagtcttc
    13861 atcctcttcg ctatcatctt taactcctaa ttctttacga aaataatgaa gttctttggt
    13921 aatatcttct atcacatttt gaagttttgc tatttttgca ttattttctc tttctttgat
    13981 attcatatag gctagcattg caattaaaag cacaattata aaaactaaat aaagtacatc
    14041 atcactcatt cttggccttt cttatttctt atcatatttc tttgaatttc aacaacaaaa
    14101 gcatcaaaag ccattttgtc ttcaggctta attttgataa tttttgccaa tgtttgactt
    14161 tgagctttga taaaaatagc tattttttga ttatttaaat caaatcttaa ataatattct
    14221 ttatcttctt ctaaaatagt atccaaaaaa tttagatatt caaaatttaa agattctatt
    14281 accccttttt gcttaagcgg tataagttct ttatttttat ctaaagaatt ttcaagcctt
    14341 aaaatatctt cttttaggct taaaagaaga tcaaaaataa ttttttcacc ctcatcaaaa
    14401 tcaatgcgta aagcaagttt tttccatttt aaaatttgag aaattgctcc aagttttagg
    14461 tattctccaa gaaaacggtt attttctatt tcacaacatt ctaaatgagc ttcaaatcct
    14521 gctttaaaaa gtgttaattc cataataaat caatccaaat aaaaataaaa aagataatac
    14581 ttaaataacc atttagagta aaaaatgctc tatcaatatg agcaaaattc ttgtgaacaa
    14641 ttttatgttc caaggctaaa ataataccgc ttataattac cccaataagt gctatttttc
    14701 caagtgctat accccaaact tcccatacaa aaagaagcca aaataatacc gctaaaatat
    14761 gacaaaaagc tgatataaat aaagtagcct ttgagccaaa tttagcagga atagagtgaa
    14821 gtcctacttt tttatcatat tccatatctt gcaaagaata aagcagatca aacccagctg
    14881 tccaaaaagt tacacctaaa cataaaataa cgctataaat gtgaatttca cccataatta
    14941 taacacttcc tgcaataggc gcaagtccta aacaaaatcc caaaactaaa tgcgctaaag
    15001 aactaaagcg cttaaaagct gaataaatag ccaatacaaa aagcacagga aaagacaaat
    15061 aaaaggccaa ggtattaata aaataagaac atgatataaa aataagtaca ttaataataa
    15121 taaaaatcca tacgcttttt ctacctattt ttccactgac attagggcga tttgcacaac
    15181 gaggattatc cttatctata tcttcatcca ttaaacgatt tgtagccatg gcaaaatttc
    15241 ttgcacttac cgcacaaata atacctaaaa tcaatgcctt aaaaccaaac caagcagtgt
    15301 catttgcaag ttttgatgct acaatcatag aggaaaataa aaaaggcaaa gcaaaaatag
    15361 aatgcttaaa tactacaagt tctaaaatat ctttaaattt tatccagaat gtgttcatt
//
LOCUS       DARBAC010000035        14999 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.035, whole genome shotgun sequence.
ACCESSION   DARBAC010000035 DARBAC010000000
VERSION     DARBAC010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14999
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.035"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            183..1364
                     /locus_tag="SB799_000814"
     CDS             183..1364
                     /locus_tag="SB799_000814"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HEG0868067.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIVVTSCATESINWVLKGVYFDHILDKERNEVIISSVEH
                     PAVAAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            1374..2345
                     /locus_tag="SB799_000815"
     CDS             1374..2345
                     /locus_tag="SB799_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HEG0868068.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(2369..4252)
                     /locus_tag="SB799_000816"
     CDS             complement(2369..4252)
                     /locus_tag="SB799_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEG0868069.1"
                     /translation="MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     LFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(4249..4884)
                     /locus_tag="SB799_000817"
     CDS             complement(4249..4884)
                     /locus_tag="SB799_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEG0868070.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            5044..5739
                     /locus_tag="SB799_000818"
     CDS             5044..5739
                     /locus_tag="SB799_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEG0868071.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            5843..6214
                     /gene="secG"
                     /locus_tag="SB799_000819"
     CDS             5843..6214
                     /gene="secG"
                     /locus_tag="SB799_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEG0868072.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIPSAPIVPAT
                     PNTNSIAPSAPQLPSDVNSSK"
     gene            6224..6787
                     /gene="frr"
                     /locus_tag="SB799_000820"
     CDS             6224..6787
                     /gene="frr"
                     /locus_tag="SB799_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEG0868073.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDTYTTKIDESVKNKESELLKV"
     gene            6790..7398
                     /gene="pyrE"
                     /locus_tag="SB799_000821"
     CDS             6790..7398
                     /gene="pyrE"
                     /locus_tag="SB799_000821"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEG0868074.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAK
                     LCDELAKIITSYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKSEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYDETNCPLCKKGSKAIKPGSRGN"
     gene            7399..7821
                     /locus_tag="SB799_000822"
     CDS             7399..7821
                     /locus_tag="SB799_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEG0868075.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYIPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKSIKKG"
     gene            7824..8846
                     /locus_tag="SB799_000823"
     CDS             7824..8846
                     /locus_tag="SB799_000823"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEG0868076.1"
                     /translation="MQRKRIYNPNSNETLGDRKIFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            8833..10206
                     /locus_tag="SB799_000824"
     CDS             8833..10206
                     /locus_tag="SB799_000824"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEG0868077.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKNQICYFDIFFRKIPD
                     SGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLTNFKFKGEIYAMRE
                     GEVIFPNEPLLCVKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLKLSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(10175..10723)
                     /locus_tag="SB799_000825"
     CDS             complement(10175..10723)
                     /locus_tag="SB799_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEG0868078.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDKKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDSALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNNEEI
                     NFLKQSALNYVDFKNEFLKDLQ"
     gene            10812..11441
                     /locus_tag="SB799_000826"
     CDS             10812..11441
                     /locus_tag="SB799_000826"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEG0868079.1"
                     /translation="MNTFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
     gene            complement(11461..12648)
                     /locus_tag="SB799_000827"
     CDS             complement(11461..12648)
                     /locus_tag="SB799_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEG0868080.1"
                     /translation="MKMDYKEQSHIVPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGIKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEVGDHG
                     STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF
                     MQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(12652..13497)
                     /gene="argB"
                     /locus_tag="SB799_000828"
     CDS             complement(12652..13497)
                     /gene="argB"
                     /locus_tag="SB799_000828"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEG0868081.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATTEVASMVL
                     NHINKNLVHSLQNLGVKVIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDEDFNTYNINADDVACAIAKALRAEKLAFLTDTAGLYEDFSDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            complement(13501..13947)
                     /locus_tag="SB799_000829"
     CDS             complement(13501..13947)
                     /locus_tag="SB799_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEG0868082.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVIDEEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            complement(13957..14985)
                     /locus_tag="SB799_000830"
     CDS             complement(13957..14985)
                     /locus_tag="SB799_000830"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEG0868083.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYNLALHRHTPEIEEHLSY
                     AAKKKITLQFTPHLVSMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
BASE COUNT         5212 a         2459 c         2264 g         5064 t
ORIGIN      
        1 aatagtattt cttatttttg ctatataaaa ttcacaaaat atttcacttt aaaattttac
       61 tttagcattt tatttttgtt ataattttta acctaatttt tataaatttt tgttattatc
      121 cgttttcaaa taaagataaa aaatatccta attaaaatta aggataaatt aaggatttta
      181 aagtgaaagt atatttagat aacaacgcaa cgacaatgct tgatcctaat gcttatgagt
      241 tgatgctacc ttttttaaag gatatgtatg gaaatccaaa tagccttcat caatatggta
      301 gcgcaacaca tcctgcctta agagaagctt tggataaact ttatgcagga cttggagcaa
      361 atgacctaga tgacatagtt gtaacctcct gtgcgacaga aagcattaac tgggtgctta
      421 agggtgtgta ttttgatcat attttagata aagaacgcaa tgaagtgatt atttctagcg
      481 tagaacaccc tgccgttgct gctgctgctt attttttaaa aagtcttgga gtaaaagtca
      541 tagaacttcc tgtaaatgaa gaaggggttt ctactgtaga agatttgcgt aaagtgatta
      601 gcgataaaac agcgcttgta agtgttatgt gggcaaataa tgaaacaggt atgatttttg
      661 atattaaagc gatggcagaa cttgcgcatg aatttggtgc tctttttcat acggatgcta
      721 ctcaagcagt aggtaaaata aaggttaatt taactcaagt aggagttgat tttgcttcat
      781 tttcggcaca taaatttcat ggaccaaagg gtgtgggtgg actttttata aaaaaaggac
      841 ttaaacttac tccactttta cacggtggag aacacatggg tggtcgtaga agcggaactt
      901 taaatgtacc ttacatagtg gctatgggcg aggctttgcg tattgcaaat actatgcttg
      961 attttgaaga ttctcatata cgccgtttaa gagataaact agaagatcaa attttagctt
     1021 tacctgatac aacagtggtt ggaaaaaggg aacaccgtgt gcctaataca atcttagcaa
     1081 gtattaaagg cgttgaaggc gaagcgatgc tttgggattt aaataaaaat ggtatagctg
     1141 caagtacggg ctcagcctgt gcaagcgaag ctttagaaag caatcctatt atggaagcta
     1201 tcggtgcgga acatgattta gcgcacacag ctttaagact ttctttgtca cgttttaaca
     1261 ctgaagaaga aattgattat gcagcaaaac aaattaaaaa tgcaacacag agattaagag
     1321 caatttcttg cacttatgct tataatccaa ataattacaa ataaggatga aaaatgggaa
     1381 aaaatagttt aattggtgga tccatttggg atgagtattc acaaaaagtt caagatagaa
     1441 tgaataatcc tcaacatatg ggagaattta gtgaagaaga tgctaaagca cgcaatgcaa
     1501 aattgatcgt agctgatttt ggcgcagaaa gttgcggcga tgcggtaaga cttttttggc
     1561 ttgtagatga aaaaactgat aaaattatcg atgcaaaatt taaaagtttt ggttgtggta
     1621 cagctatagc aagtagtgat actatggtgg atctttgtat aggaaaaact gtagatgaag
     1681 cagtaaaaat cacaaattta gatgtggaat ttgctatgcg tgataatcca gaaactccag
     1741 ctgttccacc tcaaaaaatg cactgttcgg ttatggctta tgatgtaatc aaacaagcag
     1801 cagcgcatta taaaggtata agtcctgaag attttgaaga tcaaattata gtttgcgagt
     1861 gcgctagggt aagtcttgga actattaaag aagtgattaa acttaatgat ttgcatagcg
     1921 tagaagaaat cacacaatat actaaagcgg gtgctttttg taaatcctgt atcaaaccag
     1981 gcggacatga aaaaagagat tattaccttg tagatatttt agctgaaact agagctgaaa
     2041 tagatagaga aaaactcaaa aatacaatga aaagtgatgt ggcttttgat gaaatgaccg
     2101 tagtgggaca attaaaagca gttgaaagtg ttttagatgc tgaaattcgc cctatgcttc
     2161 ataatgatgg tggagatttg gaagtgattg atatacaaaa ggctgaaggt gcagcaattg
     2221 atgtttatat tcgttatctt ggtgcttgta gtggttgttc tagtggaagt ggtgcaacac
     2281 tttatgctat tgaaacaatt ttacaagaag aattaagtcc aaatatacgc gttatgccag
     2341 tttaaaaaaa tagcaagata aaatcttgct attttatagc ttttgcttgc aaatcaaggg
     2401 gtggtaaatt ttctatataa atactacgac ttgggaaagc aaaggttaaa ccattttttt
     2461 caattatacg cataaactca agcattaaac tttgtctagc ttctctaaaa tcttttccgc
     2521 ctatttcttt ggtataaaaa taaagctcta tattaatact actatctgca aattcactta
     2581 aagccacata acaagcattt ttatagcctt ctaaatcatt aatagataca agattttgac
     2641 gatattttgt tgtatgatcg ccatatttta atgcgctatc ctcatcgtga gctactaaat
     2701 cacttgtatg caaaaattct cttagatctt ttacacattg ttctagtttt tcaggagtag
     2761 catcataacc aacacccaaa tacattctaa catggcgacc catgcgtctt ttgctccaat
     2821 ttttgatatt agctcccata atagttgaat ttggtaaaaa tacaagacaa ttatcaaaag
     2881 ttctaatagt agtttttcta agtcctgttt caaccacggt tccttctatg cctgaaacct
     2941 ctacccaatc tccttgatta aagctattat caaaaagtaa gagtatagaa gcaaagaaat
     3001 ttgcaatgat atctttcgcc gctaaagcaa cagctaaacc accaattccc aaagatgcaa
     3061 taatagccga aatattaaaa ccaagttgag caagaatata taataaagct atgataataa
     3121 tgacaaaata taaaatttta ataattaaat ttacaacttc tttttttcca cttttttgag
     3181 caagtttaga aaccaatacc acgccataac catcaagcat tcttaaaata agccatgcaa
     3241 ttaaaactgc ataaactata tgaaaaaaat tacttaaatt tacactcaaa ggtgcaggat
     3301 aagttgctat agtaagacaa agagaaatag catagacaat caacaagaaa cctacgggtt
     3361 ttttaatatt ctcaataaaa atgactttaa tatcatctac atcattttta tttctataaa
     3421 aaagctgaac aaggaaaaaa tatactatat ttgcaaaaaa acgtcttaaa gatataaaaa
     3481 atactaaaac caaagcagaa attactattt ttccgatatt aacaaaactt accccaattg
     3541 cctcatttat acgatctatc caaacttgaa gctcgagtaa tgaaaaaata taattacttt
     3601 caagcaaatc tgcatttgag cgtaaatact taagaatttc agaataagaa tctacagcat
     3661 tactgatata tctttctttt agggtaattt tttctaattc ttctggattt gtaattttgc
     3721 ttttaaaact atctaaatta acattagaag aattttgtaa attttccatt gccttatcaa
     3781 cagtagcaat caaatcttca ctgcttgctg tatttttaaa aagtttttcc acttcaaaca
     3841 aagaagaata aaaactttcc acaatattaa aataaactag attaagagta gcatctgtat
     3901 aaatataagg cttattaata ttcttttttt gaacatctag taatttttct tttgctttta
     3961 aaaatctagc cactgcctct tcattaatct tttgtcctac tatcatatcg ggtatttttg
     4021 ctaaaatagt ctttttgtct ttttcaaatt cacttaaaat accattaaaa gtgcttgaat
     4081 tttcatcatt gtttttctta aattctttaa tttgattgtt aagatcaaca tatttttcaa
     4141 ctaaagcata aattccttca tcctctttgc taatatttgc atcaataaat ttaaattctt
     4201 gtgctccaag gtataaaata aaaaaacata aactaaaaat aatttttttc attgaacttt
     4261 cctatcctgt attaaagtaa aaatttttgc tttaaaatca tactcataaa tttcacctgt
     4321 ctctataata taataccaag catgtacttc tatttttcct tcatctaaag cttcttgcac
     4381 gcctggataa gtaagtatat tttgcaaaga atttactaaa tttaattttt ctgtaagcca
     4441 tgaacgcata gccaaatcgt ctcttgcaaa aatcatcaca tcttttttta tcggatctaa
     4501 catagtaagc cattttttca cgttaggaat tttatttaac tcttcatcag aataataaag
     4561 agcattgcaa cctccacaat tactatggcc acaaacgacg atatttttaa tatgcaatga
     4621 atttaaagca tactctattg ctgaagttgt cgccaagtaa tcttctccaa cgcgataagg
     4681 tggaactata tttgcaatat ttcgtattac aaaaagctca cctggacccg tattagtgat
     4741 caaatttgga attactctag aatcagaaca acctataaaa agagtatggg gattttgctt
     4801 attttttaga ctttcaaaaa gttcttcatg ctccttaaag tcttcttgca taaacttaat
     4861 cgcaccgcta ataagatttt ccataaaacc aacctgaaac taaaatcttg aaattataac
     4921 aaaatttcag caaagatttc atttaagcat aagatattat ataaattaac tttttattta
     4981 gtctaatatg ttagatttcg ctcaagattt taaaaaatct aacaattttg caaggagaat
     5041 tttatgagtc tttatgatag agactactca agatcaaaag aatttgaaaa tacacgctca
     5101 agcgaattaa gtatttttat taaacaaact tatcaacttt ttgctgcttc attattagct
     5161 gcaacagtag gtgcgtatgt aggaattttt gctttagcat cattttttat acaatcacaa
     5221 gtaacttttt ggatcctttt tgctgttgaa atcggacttt tatttgcttt gcaatggaaa
     5281 aaaagagagg ctccattaaa tcttgtttta ctttttggtt ttactttctg ctcaggttta
     5341 acgcttacac ctttacttat ttcagtttta gctctaccag ctggaggaat tatcatcgct
     5401 caagcttttg ctttaacaac ggttgctttt gcaggactta gcgtatttgc tatgaataca
     5461 aaaaaagatt ttactgttat gggcaaagct ttatttatag tattgatcgt tattgtagca
     5521 gcatctttac taaacctttt cttccaaagc agtatagtta atctagctat ttcagcagta
     5581 gctgcaatat tattttcatt ttacattctt tatgatacgc agaatattat ccgcggaaat
     5641 tatgaaactc caatcgaagg tgcagtagca ctttatcttg attttgttaa tcttttcgta
     5701 tctttactta atatcttaag aagcttcaat agcagataaa tttttgtggg atttttctca
     5761 caaaaacttt tcaagtttca aaacttttca agttttattt agctaaaata atcatttaaa
     5821 aattaacttt taggaatttt caatgatcac tcttttaatc attttacaat ttatcatcgt
     5881 tgtagttatt tgtatagcag ttttacttca aaaaagttca agtataggac ttggagctta
     5941 tagtggaagc aatgaaagtt tatttggcgc caaaggacca gctggatttt tggcaaaatt
     6001 tacctttgtt atgggaattt tacttattgc aaatactatt ggtcttggtt atttatacaa
     6061 taaagctagc aaagactctc tagcagagaa aattaaagta gaaaacaaca atactactat
     6121 tccaagtgct cctattgtgc ctgctacccc aaacacaaat tctatcgctc caagtgcacc
     6181 acaacttcca agcgatgtta attcaagtaa ataattaaag gaaatgataa tgctaaatga
     6241 aatttttaac aaacaaaaaa cccaaagtga aaaatcttta gaagccttaa aaaaagactt
     6301 caccacttta agaactggaa aagttaatac ccatatttta gatcatatta cagtggatta
     6361 ttatggaact caaactcctt taaatcaagt agcaactgtt ttagcaagtg atgcttcaac
     6421 tattagtatt actccttggg aaaaaccttt actaaaaacc atagaaagcg ctattgcagc
     6481 tgcaaatatc ggtgtaaatc caaacaatga cggcgaaagt gtaaaattat ttttccctcc
     6541 gatgactaga gagcaaagag aagaaaatgt aaaacaagct aaagctatgg gtgaaaaggc
     6601 aaaagtttct ataagaaata tacgcaaaga tgccaacgat gcagttaaaa aactagaaaa
     6661 agataaggca ataagcgaag atgaagcaaa aaaagcttat gatgaagtgc aaaaacttac
     6721 cgacacctat acaacaaaaa ttgatgagag tgtaaaaaac aaagaaagtg aacttttaaa
     6781 ggtttaacga tgaatttaga gcaaatttat aaagattgtg gtgcttattt agaagggcat
     6841 tttttactaa gttcaggtaa acattcgcaa ttttatcttc aaagtgcaaa agttttagag
     6901 gatccaaaat tagcagcaaa actttgtgat gaacttgcaa agattattac aagctataag
     6961 atagaatttg atagcatttg ttctcctgct ttaggtggaa ttttagcagg ttatgagctt
     7021 gcaagagctt gtagtaaacg ttttatcttt accgaaagag taaataaaga aatgacttta
     7081 agacgtggtt ttgaggtaaa aaagagtgaa aaatttataa tttgtgaaga tatcattact
     7141 acaggtggta gtgctttaga gagtgcaaaa atcattgaaa gtttaggtgg cattgttgta
     7201 ggttttgcag cattggcaaa tcgtggtttt tgtgcagtag aaaatttaaa atctccaaga
     7261 aaagataatg cgaaattacc tgaaaattta ccactcttta ctctaggaaa ttttgaattt
     7321 gaaatttacg atgaaacaaa ttgtccactt tgtaaaaaag ggagtaaagc tataaaacca
     7381 ggaagtcgtg gaaattaaat gaaaactaaa gcaaaaatta gctctagatg gctaagattt
     7441 agagctttgc ttatagatat ttttcttatt tatattccta ttttgtattt attttatttt
     7501 ctattaggct ctaaagaagc ttttttaaac aaccatttta tcacaacttt atgtactttt
     7561 ttatttggct tgattcaagc tattttttta acaaaaaagg cacaaagccc aggtcttaaa
     7621 gcatatgatt tatatcttat tgatataaaa acgggaaaga aactaagttt tcttagaatt
     7681 ttactaagat atgtgatatt tattataagt tttggcttac tctttggttt atttgtcagt
     7741 tttgtaagaa aagatcgttt aaatttacac gatattttaa ctcaaagttg tatagctact
     7801 aaaagcataa agaaaggtta aaaatgcaaa gaaaaagaat ttacaatcca aactcaaacg
     7861 aaaccctagg agatcgtaaa atttttgatg gtaacccaca tggaatttta aatttcacta
     7921 aggcaaaata tacctgggct ttaaaacttt gggatttaat ggaggcaaat acttggtttc
     7981 caaaagaagt ggatacaact aaagatgcac ttgattatcg ctgtaattta actgtaggtg
     8041 aaaaaagaat gtatgatttg gtttggagtc agcttatttc tatggatagt tttcaaacca
     8101 ataatttagc agacaatatc aacccttaca tcacagctcc tgaaatcaat gcggttttag
     8161 cacgccaagc ttatgaagag gcaaaccatt caaaatctta cgctgttatg gttgaagcga
     8221 tttgcgataa tacagatttg atttatgaaa tggaaaagca tgatgaaact ttgcgtgaaa
     8281 aaaatgactt tatttcaagc atttatgaag aattagcagg cgatgtagat gataataaac
     8341 ttcttttggc tatggtggca aatcaaattt tagaaggagt atatttttat agtggtttta
     8401 ctgccattta cgcacttgca cgtgcaggaa aaatgctagg ttcagcacaa atgatccgct
     8461 ttatccaaag agatgaaatc acacatcttt tattatttca aaatatgatc aattcagtac
     8521 gcaaagaaag acctgatttg ttccatgatg aaaatatcaa taaaatttat gatatgttta
     8581 aaaaagctgg agatcttgag atcaaatggg gtaaatacat cactcaaaat caaatcatgg
     8641 gctttactga tgatatcata gaagaatata tccattatct tgtagatcaa agattaagtg
     8701 cgatcaattt agataagtta tacaatgcaa aacatcctat taaatgggta gatgattttt
     8761 caaaatttaa cgatcaaaag agcaatttct ttgaaagtaa agtaacgaat tattctaagg
     8821 gtagtataag ctttgatgac ttctaaaact tctttagcct tactttgtga tttttatgaa
     8881 tttacaatgt ctcaaggcta tttcaaaaac aataaaaaaa atcaaatttg ttattttgat
     8941 atatttttta gaaaaattcc agattcaggt tcttttgcta tttttgcagg tcttgaagat
     9001 attttagact ttgttgaaaa tttgagtttt gatgcagaag atatagaatt tttaagaaaa
     9061 caaggtattt ttgatacaga atttttagat tttttaacta actttaaatt taagggtgaa
     9121 atttatgcta tgcgcgaagg agaagtgatt tttccaaacg aacctttact ttgcgttaaa
     9181 gctacaacca tagaagcaca gcttttagaa acttttttac ttttaagttt aaaccaccaa
     9241 agccttattg ctaccaaaac caatcgtatc gtgcgtgcag ctaaagacag taaaatttta
     9301 gaatttggtt cacgcagagc acaaggaagt gaagcagcct taaaaggagc aagagcagct
     9361 tttataggag gttgcatagg aagtgcttgt actttagcag gaaaaattta taatatccct
     9421 atcaatggaa ctatggcaca ttcttgggtg caaatgtttg aaaatgaact tgaagctttt
     9481 aaagcttatg tgaaaattta tccaaaaaat cctgtttttt tgatcgatac ttatgattgt
     9541 ctaaatagcg gacttaaaaa tgcgattaaa gtttttaaag aatttggtat ccaagaaggc
     9601 ggtgtcagaa tagattctgg aaatttactt aagttgagtt tgaaaatcag acaagaactt
     9661 gatcaagcag gacttcaaaa atgtaaaatc atagtttcta acgcccttga tgaatggagt
     9721 attaaaaaac tcaaagaaca aaatgcacct attgatatct ttggtgtagg cgaaagattg
     9781 atcactgctt caagcgatcc tatttttagt tgcgtttata aactcgcagc cttagaagat
     9841 caaggcataa aacctaaaat caaaatcagc gaaaataacg aaaaatcaac cctacctcat
     9901 tttaaaaagc tttttagggt ttatgataaa aacacgcaaa aaatcctttt tgatgagctt
     9961 tatgtttttg acgaaaaccc aaatcaagat gaaaatttag aacgcaaaga acttttagaa
    10021 ttagtctaca aagaaaaaag acttcttaaa aagtcatctt taaatactat tcaagattat
    10081 acaaaagagc aaatttcaaa actcgatgag agttttttag atcttgatcg ttttgtgaaa
    10141 tttgaagtaa aactctcgcc taaacttcaa aatatcactg aagatctttt aaaaactcgt
    10201 ttttaaaatc cacataattt aaagcggatt gttttagaaa gtttatttct tcattattta
    10261 attcacgcac aaattttgca ggatttccaa gtatcaaaga gcgtggcgga aattttttac
    10321 cctttgttac aacgcttcca gcacccacta tgctatcttc ttctatcaaa gcactatcca
    10381 tgataacagc attcattccg attaaaacac gattttttat cacacaagca tggataacgc
    10441 aattatgtcc tatagttaca tcatctccta ttatcgtagg aaaaccagca tcttttaact
    10501 ttcctttttt atcaaattcc ctatgccaaa catgtaccgt gctaagatct tgaatattgg
    10561 ttcttttgcc aatttttata aaattaacat cggctcttaa aacacaatta aaccaaatac
    10621 tactttcatc tcctatttct atttctccta tgattttagc gccctctgca acaaaaacat
    10681 tttgacctag tttgggacta tgatttttaa attttataag catttttttc ctttttattt
    10741 aagtatagct aagtttaact ctatttcaac ttttttagtt acaattttta tttaaattta
    10801 taggagaagt aatgaacaca tttgaacaaa aaagatgtca aaatatggct gaagaaattg
    10861 cacaaaaagt ttttatcaat gaagaacttt ttaatgcttt ttgtcaaatt ccacgtgaaa
    10921 ttttttctcc tttaaaagcc catgcttatc gccttgatgc tttgccttta gcaaattctc
    10981 aatggattag ttcaccttta actgtagcta aaatgactat ggctttagat tttaaaaatg
    11041 ctgatagtat tttagagata ggttgtggaa gtggctatca agctgcgatt ttaagcaaag
    11101 tcataaggcg tgtttttacc atagaacgca tagaaaattt agccaaaaaa gccgctcaaa
    11161 ctttcagaga attagaactt tttaatatca atgtaaaatt tgatgatgga caaaatggct
    11221 ggaaaaatta tgctccttat gataggattt tattttctgc ttatgcgaca caaattcctg
    11281 aaattttact tgatcaatta agcgatgacg gtattttagt cgctcctatt ttacacaatg
    11341 gcaaacaatt catcacacgc cttagaaaaa atggcacaaa tttacaaaaa gaaattttag
    11401 aagaatgttt atttgtgcct atagtagatg gaaaagaata aaattttttt acaaaattta
    11461 ttaaaaactc tttagagcct ttcttaactt ttcactcatt tcatcaatat gttctttttg
    11521 taaaatcaaa ggaggtaaaa atctcaaatc attctccccg caacttatta ataaaagtgc
    11581 attttcttga catttttgaa tgaccttagc tacttttaca cttttatcaa gactcagccc
    11641 ttgcataaac cctaagcctt tgcgtttttt acaaaaatca aattcattta tcaactcatc
    11701 taaactttgc tctaaataag gcgtgagttt attgacattt tctaaaattt tttcttcttt
    11761 aaaaatttca aaaactgcat tcactcctgc acaaactaaa ggatttccac cataagtact
    11821 accatgatcg cctacttcta aagaattgct tgctaccttt tgatttatta caaaagcacc
    11881 cacactaagc ccacaaccta aggccttagc tgaagtcatg atatcaggca aaatttgcgc
    11941 gtgctcatag gcaaaaaatt ttccacttct acccatgcca cattgaattt catcagcgat
    12001 taataatata tctttttcat cgcaaagctt tcttaaggct ttgtaaaaat ctttatttgc
    12061 aggatttatt ccaccttctc cttgcacgct ttctaagata atggcacaag ttttttcatt
    12121 caccagtttt tcaacgcttg aaatatcatt atattttgca aatttaaccc ctgaaattaa
    12181 aggtttaaaa ggcttttgat atttttcatt agcagtaagc gataaagccc ctaaagtacg
    12241 cccatgaaaa gaatgcttaa aagcgataaa ttgtccaccc ttaatacctt tgttaaaggc
    12301 gtattttcta gctgttttca tcgctccttc tatactttct gtaccagaat ttgtaaaaaa
    12361 aacacgctct aaagcactag ctttggctaa atttttagct gcagcggcta tgttttcatt
    12421 ataatataaa ttgctagtat gtaaaagttt atccacttga gctttgattt tagcattaaa
    12481 tttagcatga ttatatccta aagcacaaac acctatacca cttgaaaaat caagatattt
    12541 tttagcctta tcatcaaaaa gataaacccc ctgccctttt tctaaaacta tatcaaaacg
    12601 cttataagta gggacaatat gactttgttc tttataatcc attttcatcc tttaacccac
    12661 caaagtgcct ataccttcat cagtaaaaaa ctcaagcaat aaagaatgct tcacgcgtcc
    12721 atctaaaata tgcacctttt tgactccatt ttcacaagca tcaatacagg attttaattt
    12781 tacatgcata ccaccttcta ttttgggggc taaaatttta gcttgttcaa ggctaatttt
    12841 agaaatcaaa gaatttttat cactaaaatc ctcataaagc cctgcagtat cggttaaaaa
    12901 agcaagtttt tcagccctta aagccttggc gatcgcacaa gctacgtcat cagcgttaat
    12961 attataagta ttaaaatcct catccatgcc aataggagca atgataggta aaaaatcttt
    13021 ctctaaaagc tcttctaaaa ttttcgaatt taccttttgt atcgtgccaa caaaagctaa
    13081 attttcatct tttttcacac attctaaaag cgcgccatct ttaccacaaa gccctatgac
    13141 tttaactcct aaattttgca aactatggac taaattttta ttgatatgat ttaaaaccat
    13201 gctggctact tcagtagtgg ctttatcact aaccctaaga ccgtttttaa actcactctt
    13261 tacgcctaat ttttcacaca tagcagaaat atcttttccc ccaccatgta caataatagg
    13321 ctttaaaccc acgagtttta aaagagctat atcttgcatc acacaatgct ttagctcttc
    13381 attttccata gctgatccgc cgtattttat aagtataatc ttagaattaa atttgcgtat
    13441 ataaggcaaa gcttcgatta agacattagc tttttctaaa tatttttgca tgatcattcc
    13501 ttaagcatta aagctagttt gattatactc atttaaagaa agatcgtaat aattcgcatc
    13561 ttctcttaaa gtaaaaccat aatgtttcca aaactcattg cctaaatcat tgtttttaaa
    13621 agcgattaag gcgattttat tgattttttg agcttttaaa gcctcaagac aaaattttgt
    13681 catctcgtgc gctatgccct tttttctatg atctttatgt acacatacat gataaaatcc
    13741 tcctgtgcgt ccatcatgcc cgcaaagtat acttcctaca atttcttcat caatcactgc
    13801 tacaacgcta agatttgggt ttctatctaa aaaattttct atattttctt tactatcatc
    13861 aatgcttctt atcccaaagc cttttatctc acaccaaagc ttataaacgg cttcataatc
    13921 gcttttttgc atagctcgta ttaacatttt tatcctttac aaatttgcaa agaatttaag
    13981 tccttcatct tcatcaaaat caaacattaa attcatattt tgaacagctt gtcctgctgc
    14041 acctttgatt aaattatcaa tagcaccaag cacaataaca cgctttgtgc gttgatctac
    14101 actaaaattt atatccgcaa aattgcttga tttaacccac cgagtctgcg gaagcgactg
    14161 cggcggtaaa agccttatga atttattgtt ttgatagtat tttgtataaa tatcgcgtat
    14221 atcttgttct tgcaaatcct cttttaaatt tgcataagca ctgattaaaa ttcctctttg
    14281 catagacaca agatgagggg taaattgtag agtgattttc tttttggctg catagcttaa
    14341 atgctcttca atttcaggag tatggcgatg caaagctaaa ttataagctt tgatattttc
    14401 attaacttca caaaaaagat tttccacctt tgcacttctt cctgctccac ttactccact
    14461 ttttgcatca ataataactg agctaaaatc aatgatcttt tctttaaaaa gcggataaag
    14521 acttaagata gaacaagtgg tataacaacc tggatttgcc actaaacttg ctttttttat
    14581 ctcttcttta taaagctcac aaagtccata aaccgcattt tgcaaaagct cttgattagg
    14641 atgagtgaat ttataccaaa gctcataatc tttaggattt ttaagacgaa aatccgcgct
    14701 taaatcaatg attttcatct tttttaataa attctcattt aaaagtttag cactaaattc
    14761 atgcggagta gccaaaaaca aaagatcaag ttcaagttca tctaaatttt tattttcaaa
    14821 acataaattt aaaggggtgt taggataaag atcttgataa ttttgcccca cgctagaact
    14881 cgaacccaaa taagaaattt caaccttggg atgattaagc aaaatgcgaa caagttcatt
    14941 tcccgcataa ccactcgctc ctaaaatccc aacttttatt ttcatctcta tcctttaaa
//
LOCUS       DARBAC010000036        14394 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.036, whole genome shotgun sequence.
ACCESSION   DARBAC010000036 DARBAC010000000
VERSION     DARBAC010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14394
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.036"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..686)
                     /locus_tag="SB799_000831"
     CDS             complement(<1..686)
                     /locus_tag="SB799_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEG0868084.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLK
                     FEEIFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLAT
                     FSKEFKKCFG"
     gene            complement(683..1288)
                     /locus_tag="SB799_000832"
     CDS             complement(683..1288)
                     /locus_tag="SB799_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEG0868085.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICVKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLIKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKVGLEPKGIDFLKSLLEFSQIPLYAIGG
                     INTQNIENFKDINIAGVCMREILMKEKDLKKYLLECRQNLR"
     gene            complement(1278..2423)
                     /gene="thiH"
                     /locus_tag="SB799_000833"
     CDS             complement(1278..2423)
                     /gene="thiH"
                     /locus_tag="SB799_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HEG0868086.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLTQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLSEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNALKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFGALLGIDDFRKDALATALHAHFLQQAYPHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            complement(2426..3202)
                     /locus_tag="SB799_000834"
     CDS             complement(2426..3202)
                     /locus_tag="SB799_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEG0868087.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKTQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDV
                     ALMAKAFSLAVNAGRAAFLAGLASVSKAKASSPLTGFLRD"
     gene            complement(3205..4008)
                     /gene="thiF"
                     /locus_tag="SB799_000835"
     CDS             complement(3205..4008)
                     /gene="thiF"
                     /locus_tag="SB799_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HEG0868088.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLESLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDGILICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKVGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            complement(4005..4196)
                     /gene="thiS"
                     /locus_tag="SB799_000836"
     CDS             complement(4005..4196)
                     /gene="thiS"
                     /locus_tag="SB799_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEG0868089.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGLKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            complement(4193..5638)
                     /locus_tag="SB799_000837"
     CDS             complement(4193..5638)
                     /locus_tag="SB799_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEG0868090.1"
                     /translation="MNLNQTLQEKYPHLEVSVLKLSEVKKNIDFRIDDSFWTMKLIYN
                     NKLNYKKIGECLLKSQYGISINMNEEGDGIPIYRMNDIDNMLCNFEVKKYALIDKNEL
                     QTFRLNYGDVLFNRTNSYEFVGRTGIFYNNRENFVFASYLVRLVCNKEILLPEYLTVF
                     LNTHIGKKEIRRRARPSINQANVNPEELKEIKIPIFPMEFQLEIQNLVKDSHKALEES
                     KELYKKAEETLYLELGLDPKNPLQSLLDSKTNNPTKSLNISIHTLKESFLKTGRLDSE
                     YYQSKYEDIEKMIRSYKDGFCNLKDLVNDISSGFAFSSDDYQDVGELVLIRINNIKNA
                     TLDLSNVIYLKNEAYNLSPKDKIKKGDILISMSGSIGLSCVVRDDISAMVNQRILKIS
                     IKNFNSDVLVLLLNSFICKMQFERIGTTGGVQTNLSSIDMQNILIPKIDSTTQEKIAK
                     YIQESFNLRKKSKQLLDNAKIKVEEQIQGKI"
     gene            complement(5764..6267)
                     /locus_tag="SB799_000838"
     CDS             complement(5764..6267)
                     /locus_tag="SB799_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868091.1"
                     /translation="MYHLLDFSTCKCENEKFDLAYKIFKQDFIEVPLYLAGCIYIDPQ
                     SHKKHKGKEKIFWHITTRENKQNKTREFDSQRACRINWIKQIIINHTHPEIKAFYYKE
                     KRAIRFYLWLYNHNFIVILQKLGRSSSFLVTSFYIDKGYNKNIYEKRYRNYINGNDIE
                     LKNCEWF"
     gene            complement(6267..6992)
                     /locus_tag="SB799_000839"
     CDS             complement(6267..6992)
                     /locus_tag="SB799_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HEG0868092.1"
                     /translation="MNNMKEFKIFCDESNHLFYKDNPTLCSRVMVLGALKVPSSEIIK
                     INKTIKYLKHKYKYNKEIKWTKLNLSQKGFYDELLEFFFSSVYMWFKAVLIPNKTILQ
                     HDIYNQGDHDLFYYKMYYQALHNLIDIDTKIKIYLDYKDTKSGDKIKGLEKVLFNKFK
                     QSVNIKIFTIQSHESNIVQLVDLLIGAISYKARNDIEHVSEIKNYIINKIETLANIEL
                     DAGTPPWENKFNIFRIQLSKGEQ"
     gene            complement(6997..9060)
                     /locus_tag="SB799_000840"
     CDS             complement(6997..9060)
                     /locus_tag="SB799_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEG0868093.1"
                     /translation="MIEEILKDSDYKLDLFSKKAIAELETKIIAKTNKNNQIIYYTNC
                     LIRDKEIKLTPEEIVRQLYIDKLLNEYNYPKDMIKIEFGVHFGREVKRADIVIMDKIQ
                     ITVPYIIIEVKKPKLKDGKEQLKSYCNATGATMAVWCNGKEISYYHRKDPNYFESIPN
                     IPASNQTLPDLLKVKFTFDDLIKEDILKSQKRSLKNLVTEMEDEVLANAGVDVFEECF
                     KLIFIKLFDELEGARDRTKSLEFRNYGESDSELKQKIEKLFDKAKKKWEGVFNNDEKI
                     KLSPSHLSVCVSSLQNVKLFNSNLEVIDDAFEYLVNKSSKGKKGQYFTPRYVIDMCVK
                     MLNPKKDESMIDTASGSCGFPIHTCFYVWRSIYKERGIEASHLFTAQEKISECQDYVK
                     EKVFGIDFDEKSVRVSKMLNLIAGDGHTNVLYLNSIDFDRWDEWVKDDEDWQDVYFEG
                     FKRLKNLRVTKNQNRDFNFDVLMANPPFAGDIKESRILARYELGKKENGKPQSKVGRD
                     ILFIERNLDMLKPGGRMAIVLPQGRFNNSSDKYIREFIAQKARILAVVGLHGNVFKPH
                     TGTKTSVLFLQKWDDKLCPKCEDYNIFFATMNEPSKDNSGEKIYYPLLDSHDHLVVKH
                     DLFHPHLEGDEPIKQKDESQEEFDKRIQEYRLNVEKYKDLQKDGIAEAFIEFAKAENL
                     SFWKE"
     gene            complement(9070..10167)
                     /gene="dapE"
                     /locus_tag="SB799_000841"
     CDS             complement(9070..10167)
                     /gene="dapE"
                     /locus_tag="SB799_000841"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEG0868094.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFNDEGEHLAFGGHVDVVPAGEGWKNDPFEPLEEEGFIYARGAQDMKSGVA
                     AFIDAVKDVSFKGRRLSLILTSDEEGEAKYGTKAVLEWMKEKNMLPDYAVVAEPTCVK
                     KMGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            complement(10172..10771)
                     /locus_tag="SB799_000842"
     CDS             complement(10172..10771)
                     /locus_tag="SB799_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEG0868095.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRFLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGIILNGSNPYVIGFWLSATGIVLSNQHTYSTILGLVVAILFWIGALAF
                     VVAKYSYLFSAKVIRIINIVSALIIEYFALSLLYKTFIG"
     gene            complement(10764..11465)
                     /locus_tag="SB799_000843"
     CDS             complement(10764..11465)
                     /locus_tag="SB799_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HEG0868096.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     IHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAID
                     KITLDIENFMKDGNV"
     gene            complement(11508..>14394)
                     /locus_tag="SB799_000844"
     CDS             complement(11508..>14394)
                     /locus_tag="SB799_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEG0868097.1"
                     /translation="ITFVSNEDIEKDFKQLKIKTLKEVMQNYIKELKFYSNNDFAFLE
                     VHNKELFLKNALVLKEIVELFANYKLTQNSTNQFLGNLFELFLQKGMKQDEGQFFTPI
                     QICEFIMYSLPLQEMLSKSSKALRVIDYACGAGHFLNTYANELKRYLTEDELKEHYKN
                     IYGIEKEYRLSKVSKVSSAMYGQNEINILYADALASFELANTNNLEGEKAKPQIESNS
                     FDLLIANPPYSVKGFLETLSDKSKNTYKLFNDDINIETNNSIECFFCERANQILNDNA
                     KAAIILPSSILNKDSIYKNTREILFQNFDFIAIVELGNQTFGATGTNTIILFLRKKET
                     FKQENHLISQDYSLIKERIEAENLKDNENFYQNYLSAYCDFRKFDKELYSNFLNGNLD
                     FNLAELEAFKDYRNAFRQTSDYKKLKESKIYKESKDKQDLEDKAFLAYAQAIEKDKLL
                     YFSLSLNQEVLIIKSPSDIKEQKKFLGYEWSNRKGDEGLKELHEPYLSPLFERGNPQN
                     ETKLNTLIYKSFLNTLDVIPQELQTYATKARLVDMIDFEKVEFNKAISLNPKTQREEI
                     KSQYPLVKLKICGDFFMGGTPSRKNINYWNGDIKWLTISDYSNHQVIMDTKEKITREG
                     FKNSNAKMIQKGAVVVSIYATIGRVGILGEDMTTNQAIVAIIPNEEFINKYLMYAIDY
                     FKFQLYNEVITTSQQNINLGILQNMVIPKPPLEIQKQIVAECEKIEEQYNTLSLSIKE
                     YQNLIKAMLQKCGIIEDNQEYELNSILDKINNLCKINLDSEFLSSFNKTIKEYALSNP
                     IFKLSIGKRVLNNELLENGQIPVYSANVLEVFGFVNKEILQDYDNDSVLWGIDGDWMV
                     GFIPKNKKFYPTDHCGVLRVDDTKINAKYISFILNEAGKKQGFSRKLRASIDRIKALR
                     VKLPSLEFQDQIADIIDKIEKKINEYKIELDRLEKEKEKILQKYLFS"
BASE COUNT         4662 a         2664 c         1661 g         5407 t
ORIGIN      
        1 tgtccaaaac atttcttaaa ttctttagaa aaagttgcta aatctaattt cgcaaaatta
       61 gacatttcat ttacgcttaa aaattctcta ccgcaatact caaaaagttg ggaaagatcg
      121 aggcgaaatt cttttaaaat tcctgataaa aaactaataa aataaatatt cttatttaaa
      181 agcaaatgta aaaaaatctc ttcaaatttc aaactcacta taggatctaa aatttgcgta
      241 ttttcttcaa aatgcggtga aaaactttcc aaaattcctt gcaaaatctt atcatttttt
      301 acccaaaaaa tttcatagtt ttgaaacttt tgatctagtt taaaaaaatc tttatactta
      361 taaataagtt caattaaaaa tgcattgtca aaaaaaaata aataagcttc ataaactcct
      421 ttactaagtc ctacattgct taaagtatag ctcccagctt ttaaaaacaa agtttcataa
      481 gagttaatct tataatcttt tgatgcagtg tgtaaaattt tatatccttt gcgaacaaaa
      541 gttaaaagat gacttcctac attaacaaaa gtagaatgcg aagtatccgt ttgtgtatat
      601 ttagcaaaag tgcaagattt aattttttta taattgacac cttttaattg ctttaaatct
      661 tctggtaaag aaagaatttt attcatcgta aattttgcct acattctaaa agatactttt
      721 taagatcttt ttctttcatt aaaatttcac gcatacaaac gcctgctata tttatatctt
      781 taaaattttc tatattttga gtattgatac cgcctatagc ataaagtgga atttgactaa
      841 attcaagcaa ggattttaaa aaatcaatcc ctttaggctc taaacccacc ttgcaagaac
      901 tttcaaaaat atgccctaca aaagcataat ttaccttata actcatcgcc tctaaaagct
      961 cttctttact atggactgaa gtgccaagta tatgaaaata ttttattaat ttaggctctt
     1021 ttcttagcaa agaaagcggt gcgtgaaaat aacgatgccc caattttaaa cactccctat
     1081 caaaaaaatg caaaaaacaa gtcacttttt gctttacgca aatgcttaaa acttcttttg
     1141 ctaaatcata atactcaaat tcgcttaaat ctttttctct taaaactata gcatctacct
     1201 tagccttagc aagtttttca atctgcttta aaaagtctat ttctacacat tttctatcgc
     1261 ttatggcgat gattttttta tcccacatag atactatcgc tcatcacagc ttgtaaattg
     1321 gatcttttaa gcatagctaa aatttcatct acgcttctat catctgaaat ttcaaactgc
     1381 tcatcaccct ttttctcacc cttatgctca cctataccca cactcactcc tgcactcatt
     1441 ttagtagcac caagcttaat aacctcatct ctaaagccta ttctttcacg acttgaaatg
     1501 gtaatgcctg caaaaggtaa aaaaagtcta taagcacaaa gtacttgcaa aaggcgtttt
     1561 tcactcacat ctttaggatg aattttagca ttattgataa taggccttaa acgtggtact
     1621 gaaatagaaa tttcagcatg aggataagct tgttgtaaaa aatgcgcatg aagtgccgta
     1681 gcaagggcgt cttttctaaa atcatctata cccaaaagtg cgccaaaagc cactccacgc
     1741 atacccgctt ttaaagctct ttcttgagca ttaaagcgat aagggaaaat gcgtttttca
     1801 ccagctaaat gaattttaga atattttaaa gcattgtaag tttcttgaaa aacagtcaca
     1861 taatcacaac ccttttcatg caaaatttta tattcatctt cattcatagg ataaatttca
     1921 acgcctacaa ccttaaaata ctctctagct attttacaag catttgctat atattctaca
     1981 cttgcaaact ccctaccctc gcctgttagc attaaaattt cttctaaacc acttttagca
     2041 atggcttgca tttcttcgtg aatttcagct tcacttagct tggctcttgc gattttatta
     2101 cctttttgaa aaccacaata aacacattta gaattacaat aatttgacaa ataaagtggg
     2161 gtaaaaagag agatagaatt tccaaaatat ttttgcttga ctttagcgga tttaaaggct
     2221 aattcttcta tgaaatcttc tgctgcactt gaaagcaaag cttttaaatg ctctatgctt
     2281 aaatgtgttt gatttaaagc atttttaaca tctttagcgc taaattgact ctcatcataa
     2341 ctttgaactt gagttaaaac cttgtttaaa atttcgcttt ttatttcctg catatgaggt
     2401 aaatactgca tataatcttg cataatcaat cccttaaaaa gcctgttaat ggagaacttg
     2461 ctttagcttt actcacactt gccaaacctg ctaaaaaagc cgctcttccc gcatttactg
     2521 ccaaagaaaa cgctttagcc attaaagcaa catcttttgc ttcagctatg gctgtattta
     2581 ccatcaccgc acttactccc atttgcatag cttcacaagc ttgtgaagga cttccaatac
     2641 ccgcatctac aatgataggc aaatcaattt cattaagcaa aatttgtata aattccttag
     2701 cacataaacc tttattgctc ccaataggcg ctgctaaagg catgatagcc gcagctccag
     2761 catcacgcat agctctagct gcgtaaagat cagcatgcat gtaaggtagg ggcgtaaaac
     2821 cctctttagc taaaagctca caagctttaa tcgtttcata attatcaggc agcaaatacc
     2881 tactatcgct tatcacttct atcttgataa gttctccaca accaagctct cttgaaagcc
     2941 ttgcaatgcg taaagcttca tcggcgtttc ttgcgcctga agtgttgggt aaaagtgtga
     3001 tatttttagg gatataatca agtatattag caatttcccc tgtatttgca cggcgtaagg
     3061 ctagagtgat aatctgtgtt ttagcttctt ctatagctga ttttataagc tctagcgaat
     3121 attttccaga acctaaaata aatcttgaat caaactcgta tttgcctatt tttaatttat
     3181 cgttttttaa attttcttgc atttttactc cttatttgct aaaagctcta aaacaaggtt
     3241 actttgatgt cctgcgcaaa tatttaccct tggcgccata agtccatttc ccaccttagc
     3301 accatttacc aaatccccgc acacatagaa atttttagca atttttcttg tttgtatgct
     3361 gttgctatca ccatagcccg caagccctga agcgcagatt aaaataccat ctttgtaaaa
     3421 tctatgaaaa ttttgcgcta tcattgcttt tgcgatagca ctatcaaagg cttcacaaac
     3481 tatatctata tctttaaaca aagactctaa attatcctca tcgattttta aagtacaaat
     3541 ttcaacgctg atataaggat taatttcgct aatttgctct tttaaagctt cggttttaaa
     3601 cttgcccaaa tcacttacac ggtaagcttg acgatttaaa ttactaggct caatcacatc
     3661 aaaatcaatc aactttaaat accccactcc acttcttgcc aaatttatcg ctatatgtga
     3721 tccaagtccg cctaaaccac acaccgccac gcgcccattt ttaagtttat cgtgaagctt
     3781 tggtgtatgt cttgctctca tcatagcatc tagtgcgtct tttggaggta aagtattttt
     3841 ttctatacaa aaaagctcat cattttcatt taaagcgata ttctcttttg ttgcaaaacc
     3901 attgataatc catacatcat tttcattttt gctgatattt tcaaaaaatt ccaaacttgt
     3961 tttaaagtct gtatcaagtt ctttgccatt gaattttact ctcatcatcc acctcctaca
     4021 aaacttacga tttcagcttt atcgttttct tttaaaatca aattttcaaa ttcactctta
     4081 ggtataatct ctccatttaa ttccaaggcg ataagttcta ttttcaagcc tttttctttg
     4141 ataaaatcca taaatttaag ctcttttaac tcaagctttt gtccattgat aatcatattt
     4201 ttccttgtat ttgctcttct actttaattt ttgcattatc taataattgt ttagattttt
     4261 tccttaaatt aaagctttct tgtatatatt ttgcaatttt ttcttgagtt gtagaatcta
     4321 ttttagggat aaggatattt tgcatatcta ttgaagaaag atttgtttga accccacctg
     4381 tagtaccaat tctctcaaat tgcattttac aaataaaaga atttaaaagc aataccaaaa
     4441 catcactatt aaaattttta atcgaaattt ttaaaatcct ttgattaacc atagctgata
     4501 tatcatctct aaccacacaa gacaaaccaa tgctaccaga catagaaatt aaaatatcac
     4561 ctttttttat tttatcttta gggcttaaat tataagcttc atttttaaga tagataacat
     4621 tgcttaaatc tagcgtagca ttttttatat tattaatcct aattaataca agctctccaa
     4681 catcttggta gtcatcactt gaaaatgcaa aaccacttga aatatcatta actaaatctt
     4741 ttaaattaca aaagccatct ttataacttc taatcatctt ttctatgtct tcatatttac
     4801 tttgataata ttcagaatcc aatcttcctg tttttagaaa agattctttt aatgtgtgta
     4861 tagagatatt gagtgatttt gtaggattat ttgttttaga atctagcaaa ctttgcaatg
     4921 gattctttgg atcaagtcct aactcaaggt ataaagtttc ctctgctttt ttatataact
     4981 ccttactttc ttctaatgcc ttatgagaat cttttaccaa attttgaatt tctaactgaa
     5041 attccatagg gaaaatggga attttaattt cttttaattc ttcaggattt acattagctt
     5101 gattaattga tggtctagcc cttcttctta tctctttttt accaatatgc gtatttaaaa
     5161 aaactgtaag atactctggc aacagaattt ccttattgca aacaagcctt actaaatatg
     5221 aagcaaaaac aaagttttct ctattgttat aaaaaattcc tgttctgccc acaaactcat
     5281 aggaatttgt tctattaaac aaaacatctc cataatttaa cctaaaagtt tgcaattcat
     5341 ttttatcaat taaagcatat tttttgactt caaaattaca aagcatatta tcaatgtcat
     5401 tcattctata aatagggata ccatcgccct cttcattcat atttattgaa ataccatatt
     5461 gagattttaa taaacattct cctatttttt tatagttcaa cttattgtta taaataagct
     5521 tcattgtcca aaaactatca tctatgcgaa aatctatatt ttttttcact tcactaagct
     5581 ttaatacact tacttctaaa tgtggatatt tttcctgcaa agtttggttt agattcattt
     5641 tattcctttt tttatttcaa tctaagtaaa aaatatttat aattataaag ctcaactacc
     5701 ggtggtagaa agagatggct agcttttatg cttcttgcag atgcctaaat ctgcaccaaa
     5761 cccctaaaac cattcgcaat tctttagctc tatatcattt ccgtttatat aatttctata
     5821 tcttttttca taaatatttt tattatatcc tttatctatg tagaaacttg tcactaaaaa
     5881 tgaactactt ctgcctagct tttgtaaaat aactataaaa ttatggttat ataaccacaa
     5941 ataaaaacgg attgcccgtt tctctttata ataaaaagct ttaatttcgg gatgagtatg
     6001 attgataata atttgtttaa tccaatttat tctgcaagct ctttggctat caaactccct
     6061 tgttttattt tgtttgtttt ctcgtgttgt gatatgccaa aatatctttt ctttcccctt
     6121 atgcttctta tgtgattgcg gatctatata aatacaacct gctaaataca atggaacctc
     6181 aataaagtct tgtttgaaaa ttttataagc taagtcaaat ttttcatttt cacatttaca
     6241 agtgctaaaa tccaagaggt gatacattat tgttcacctt tactcaattg aatcctaaaa
     6301 atattaaatt tattttccca aggtggcgtt cctgcatcca attcaatatt tgccaatgtt
     6361 tcaattttat ttataatata attttttatt tcgcttacat gctctatatc atttcttgct
     6421 ttgtatgaaa tagcacctat taacaaatcc acaagttgaa caatatttga ttcatgtgat
     6481 tgaattgtaa aaatttttat atttactgat tgtttaaatt tattaaacaa aactttttcc
     6541 aatcctttta ttttatctcc actcttcgta tctttataat caagatatat ttttattttt
     6601 gtatcaatat ctattaaatt atgcaatgct tgataataca ttttataata aaataaatca
     6661 tgatctcctt gattgtaaat atcatgttgt agaatggttt tatttggaat taatacagct
     6721 ttaaaccaca tatatacaga agaaaaaaag aattctaata attcatcata aaaacctttt
     6781 tgacttaaat ttagttttgt ccatttaatt tctttattat atttgtattt atgctttaaa
     6841 tatttaattg ttttattaat tttaataatt tcagatgatg gaactttaag cgctcctaat
     6901 accataaccc ttgaacacaa agttggatta tctttgtaaa ataaatgatt gctttcatcg
     6961 caaaaaattt taaattcttt catattattc attcacttat tctttccaaa aactcaaatt
     7021 ttctgctttt gcaaattcaa taaaagcttc agctatgcca tctttttgca agtctttata
     7081 tttttctaca tttaatctat attcttgtat tcttttgtca aactcttctt ggctttcatc
     7141 tttttgtttt ataggctcat ctccttctaa atgcggatga aataaatcat gttttactac
     7201 taaatgatca tgagaatcta aaagtgggta ataaatcttt tcgcctgaat tatctttact
     7261 aggctcattc atagtagcaa agaagatatt atagtcctca cactttggac ataatttatc
     7321 atcccatttt tgtaaaaata aaacacttgt ttttgtcccc gtgtgtggct taaagacatt
     7381 tccatgaagt cctacaaccg ctaagattct agctttttgt gcgataaatt ctcttatata
     7441 tttatcgctt gaattattaa aacgcccttg tggcaataca atagccattc taccaccagg
     7501 ctttaacata tctaaatttc gttcaataaa taaaatatct cttcctacct tactttgagg
     7561 tttgccattt tcttttttgc ctagctcata tctagctaaa attctactct cttttatatc
     7621 tcctgcaaaa ggcggatttg ccattaaaac atcaaaatta aaatctctat tttgattttt
     7681 agttactctt aaatttttta agcgtttaaa accttcaaaa tacacatctt gccaatcttc
     7741 atcatctttt acccactcat cccatctatc aaagtcaatg gaatttaaat acaaaacatt
     7801 tgtatgccca tcacctgcaa ttagattaag catttttgat acgcgcacac tcttttcatc
     7861 aaaatctata ccaaacactt tttcttttac ataatcttga cactcagaaa tcttttcttg
     7921 ggctgtaaag agatgacttg cttctatgcc tctttcttta taaattgaac gccacacata
     7981 aaaacaagta tgtatcggaa atccacaact tccacttgca gtatctatca tactttcatc
     8041 ttttttggga tttagcattt ttacacacat atctattaca taacgcggag taaaatattg
     8101 ccctttttta ccttttgagg atttattcac tagatattca aaagcatcat caatcacttc
     8161 taaatttgag ttaaataact ttacattttg caatgatgat acacatacac ttaggtgcga
     8221 aggagaaagt ttaattttct catcattatt aaatacacct tcccattttt tctttgcttt
     8281 atcaaagagt ttttctattt tttgcttaag ttcagaatca gactctccat aatttctaaa
     8341 ctctaagctc tttgttctat ctcttgcacc ctctagctca tcaaaaagtt ttataaatat
     8401 aagcttaaaa cattcttcaa atacatcaac tccagcattt gccaacacct catcttccat
     8461 ttctgtaact aaattcttta aacttcgctt ttgacttttt aaaatatctt ctttaatcaa
     8521 atcatcaaag gtaaatttta ctttcaacag atccggtaat gtctggtttg atgcaggaat
     8581 atttggaata gattcaaaat aatttggatc ttttctatga taatagctaa tttctttacc
     8641 attacaccac acagccatag ttgcacctgt agcattacaa taacttttta attgttcttt
     8701 gccatctttc aactttggct tttttacttc tataatgatg tatgggactg tgatttggat
     8761 tttatccatt atcacaatat cagccctttt tacttcgcgt ccaaaatgca caccaaattc
     8821 aatttttatc atatctttag gatagttata ttcatttaaa agcttatcga tataaagctg
     8881 gcgcacaatt tcttctggcg taagtttaat ttctttatcg cggataaggc aattagtata
     8941 gtatataatt tggttatttt tgtttgtttt agctataatt ttagtttcca attcagcaat
     9001 agctttttta ctaaatagat ctagcttata atcactatct tttaaaattt cctcaatcat
     9061 tctaaacctt taaaaatttt ctatcaagtc tttaaaaaca agacaaagtt tttcaaattc
     9121 ttctatactt accctttcat caatagcgtg aattctatca ttacaaaccc caaattctac
     9181 tacctttaca ccgtattttg caaaatacct tgcatcactt gtaccgcctt tggtattaag
     9241 ctctggcact tcatgagtga ttttttgaac gctttcattc attttttgaa cgattttatt
     9301 atcgatattt gtcaaaaaag cttcgcttga ttgttttagc tctaactcat agtttaaacc
     9361 atgacaaatt ttttctacat aactttttac atcttctaag cttgtatcag gggaattgcg
     9421 tacattaaac ataagtttta aatcatttgg cgttacatta cataccccca tacctccacg
     9481 aatatcagtt ataacgattt ttgaaggact aaattcagca ctacctggat caagatcaaa
     9541 acccgctaaa agctttaaaa ccggtgcaaa atcatgcaca ggattgatac atttttcagg
     9601 ataagcaaca tgcccttgtt ttccacggat taaaagtttt ccattgatag aaccacgacg
     9661 ccctattttg atactatcgc ccattttttt tacgcaagta ggttcagcaa ccacagcata
     9721 atcaggtagc atattttttt ctttcatcca ttctaaaaca gcttttgttc cgtattttgc
     9781 ctcgccttct tcatcgcttg ttaaaataag gcttaatctc cgccctttaa agctaacatc
     9841 ctttacagca tcgataaaag cagctacgcc acttttcata tcctgtgcac cccttgcata
     9901 gataaagcct tcttcctcca aaggctcaaa aggatcattt ttccaaccct cacccgcagg
     9961 aacgacatct acatgcccac caaaagctaa atgctcaccc tcatcattaa atttcttagt
    10021 aagcaagaga tttttaatcc cctctttttc tataaaaaaa gcttcaaaat cactcagttc
    10081 catagcgatg aaatttaaag ctccatcatc atttggcgta acagatttaa attttaaaag
    10141 ttcgattaaa aattcttttg cattcatttt tttatcctat aaaagttttg tataataaac
    10201 tcagagcgaa atactctata atcaaagctg aaactatatt gataatacga atcacctttg
    10261 cactaaaaag atagctgtat tttgcgacaa caaaagctaa agcacctatc caaaaaagaa
    10321 tagcaacaac aagccccagt atcgtagaat aagtgtgttg attgcttaaa actatgcctg
    10381 tagcactaag ccaaaaacct atcacataag gattagagcc atttaaaatg atacctttaa
    10441 tataactttt caaaagactt tctttaaatt ctttatgctc taaatttaag ctttctttct
    10501 tttttcttag catcaaatac gccatataag ttaaaaaaca aaaaccaaaa atcgccaaaa
    10561 aacgcataaa aatgacattg tctaagaaat ttaaaagccc aaattgaagc aaaaaaagat
    10621 aaagcatatc tatactaaat gctccaagtc ctacagctat ggaattttta aaagctttta
    10681 gtgcataagt taaaatcaaa atatttacag gtccaaaagg cacactcact ccaaagccca
    10741 aaaaaactcc acttaaaaaa gaatcaaaca ttaccatctt tcataaaatt ttctatatca
    10801 agtgtgattt tatcaatagc gcttataata tcttctatat agattttatc aaaatatcgc
    10861 tctaaattca catctttttc ataaatattt aaaatacttt tttcacacat tgaagcatac
    10921 tgccccacag gcaaaaccgc cccacttgtg cctatgctaa taaataatga agtttgatga
    10981 agtaaagaat aaagcgtagc ataagcagga gcttgctctt caaacatgac tatattgtgt
    11041 cttaaatcct tacttttgca ttttgggcat tgtttatctg tgaatttttc atagcctata
    11101 ttaaaaattc cttcacattt taggcaacga agttcgggca aaaagccatg caaatgaatc
    11161 acatctttac accctgcacg ctctagcaaa tcatctacat tttgcgtgat gacaaaaagg
    11221 tttttacccc atttttcttt taattgtgcg attttttcat gagcatgatt tggctttaca
    11281 ttttgaagtt gtgcccttct tgcatcgtaa aaatcaagta cttttttagg attttttcta
    11341 aaacctgttg cagagcaaac ctccatcaca tcgtattctt cccaaagtcc atcattatct
    11401 ctaaaagttt taagcccact tggagcagac aaacccgctc cgcttaatat cataatgttt
    11461 ttcatcgcta aaccttataa aatttacaaa gtttagcgaa aaatgcttta agaaaataaa
    11521 tatttttgca agattttttc tttttctttt tctaatctat caagttctat tttatattca
    11581 ttgatttttt tctcaatctt gtcaattata tctgctattt gatcttgaaa ttctaaagaa
    11641 ggaagtttaa ctcttaatgc ttttattcta tctattgaag ctctaagttt tcttgaaaat
    11701 ccttgttttt taccagcttc atttaaaata aaacttatgt atttagcatt tatttttgta
    11761 tcatcaaccc ttaatacccc acaatgatca gttggataaa actttttatt ttttggtata
    11821 aatcccacca tccaatctcc atctataccc cacaaaacag aatcattatc ataatcttgc
    11881 aaaatttctt tattaacaaa tccaaatact tccaacacat ttgcactata aacaggaatt
    11941 tgtccatttt caagcagctc attatttaaa actctttttc caatacttag tttaaaaatt
    12001 ggatttgata aagcatattc tttaattgtt ttattaaatg atgataaaaa ttcactatcc
    12061 aaatttattt tacacaaatt attaatttta tctaaaatag aatttagttc atattcttga
    12121 ttgtcctcta taataccaca tttttgaagc attgctttga ttaggttttg atactctttt
    12181 atactcaaac ttaaagtatt atactgctct tctatctttt cacactctgc tacgatttgt
    12241 ttttgaattt caagcggtgg ttttggaata accatatttt gcaagattcc taaatttata
    12301 ttttgttgcg aagttgtaat aacttcgtta tataattgaa atttaaaata atcaatagca
    12361 tacataagat atttatttat aaattcttca tttggaataa tagctactat agcttgattt
    12421 gttgtcatat cttcgcctaa tattccaact ctaccaatag ttgcataaat tgaaacaaca
    12481 acagcacctt tttgtatcat ttttgcatta gaattcttaa aaccctctct tgtaattttt
    12541 tctttagtat ccataataac ttgatggtta gagtaatcgc taattgttag ccacttaata
    12601 tccccattcc aataatttat attttttctt gatggtgttc ctcccatgaa aaaatctcca
    12661 caaattttca atttaaccaa tgggtattga gactttattt cttctctttg agtttttgga
    12721 tttaaactta tagctttatt aaattccact ttttcaaaat ctatcatatc aacaagcctt
    12781 gcttttgtag cataagtctg taattcttgc gggataacat caagcgtatt taaaaaagat
    12841 ttgtagatta aagtattaag cttagtctca ttttgtggat tgcctctttc aaaaagtggg
    12901 ctcaaataag gctcgtgcaa ttcttttaaa ccttcatcac cttttctatt actccactca
    12961 taacctaaaa atttcttttg ttcttttata tcacttgggg attttatgat taaaacttct
    13021 tgattaagac ttagactaaa ataaagcaat ttatcctttt ctattgcctg agcataagct
    13081 aaaaaggctt tatcttctaa atcttgctta tctttacttt ctttataaat tttagattct
    13141 ttaagttttt tataatcact tgtttgccta aatgcattgc gataatcttt aaaggcttct
    13201 aactctgcaa gattaaaatc taagtttcca tttaaaaaat tactataaag ctctttatca
    13261 aattttctaa aatcacaata tgcacttaga taattttgat aaaagttttc attgtctttt
    13321 aaattttcag cttctatgcg ttctttaatc aaactataat cttgagaaat aagatgattt
    13381 tcttgtttaa aagtttcttt tttgcgtaaa aataaaataa tcgtatttgt ccctgttgct
    13441 ccaaatgttt gattacctag ctctacaatg gcaataaaat caaaattttg aaacaatatt
    13501 tctcttgtat ttttataaat agaatcctta tttaaaatag aacttggcaa aataatggca
    13561 gctttagcat tatcatttaa aatttgattt gctcgctcgc aaaaaaagca ttcgatagaa
    13621 ttatttgttt ctatgtttat atcatcgtta aaaagtttat aggtattctt agatttatca
    13681 cttaaagttt ctaaaaatcc ttttacagaa taaggcggat ttgctataag caaatcaaaa
    13741 ctatttgatt ctatttgtgg ttttgctttt tctccttcta aattatttgt atttgctaat
    13801 tcaaaagaag caagtgcatc agcatataaa atattgattt cattttgccc atacattgca
    13861 cttgatacct tagaaacctt acttaagcga tactcttttt caataccata aatattttta
    13921 taatgctctt taagctcatc ttctgttaga taacgcttaa gctcattggc ataggtgttt
    13981 aaaaaatgtc cagcaccaca agcataatca atcaccctta aagctttaga gcttttgctt
    14041 aacatttctt gaagcggtaa agaatacata ataaattcac aaatttgaat aggggtaaaa
    14101 aactgccctt catcttgctt catacctttt tgtaaaaaaa gttcaaaaag attgcctaaa
    14161 aattgatttg tagagttttg agtaagcttg taatttgcaa aaagctctac tatttctttt
    14221 aatacaagtg cattttttaa gaataattct ttattatgca cttctaaaaa tgcaaaatca
    14281 ttatttgaat aaaattttaa ttctttgatg taattttgca ttacttcttt taaagttttt
    14341 atctttaatt gcttaaagtc tttttctata tcttcattag atacaaaggt aatt
//
LOCUS       DARBAC010000037        14114 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.037, whole genome shotgun sequence.
ACCESSION   DARBAC010000037 DARBAC010000000
VERSION     DARBAC010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14114
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.037"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            87..1616
                     /locus_tag="SB799_000845"
     CDS             87..1616
                     /locus_tag="SB799_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEG0868098.1"
                     /translation="MTKQEIQKLDTNFLGHPKPLFSLSMVELWERFAFYGIRSLLVLF
                     MATTISKGGLGISTEYASAIYGIFAGCLYLAALPGGWITDNYLGQKKALFLGSFIIAL
                     GHISIALSILSTPIFFLGLTFIVIGTGFFKTSASVTVGMLYKQNDTRCDTGYTIFYIG
                     INIGAFIAPLICGFVQAKWNYHLGFGIGGLGMLISLLILYFKATPELEEFHKNCTLKQ
                     NWEQPFKKSKNLTLILSISLLSIIGFFLIFINLADINPIILSKKLLIVILLCLVIYFI
                     YLFVFKTLNKREKQQLTILIVLFFVATFFWSTFEQKPTAYNLFAQDFTNRNIFDWKIP
                     TNWFQSFNPIFIIILAPIASYIWIFLEKKNIYFSSIGKFTLGILFAGIGFMMMTFASQ
                     NLINNNGLPISMVWIIISIFFLTLGELCVSPVGLSIMAKVAPDLIKNQIMGLWFVASA
                     LGNFVAGLIGGNVNIKNIDQLPNIFGQCMWMLFVVALLLFIAKKPIYKILNEKNKQLS
                     N"
     gene            1788..3340
                     /locus_tag="SB799_000846"
                     /pseudo
     CDS             1788..3340
                     /locus_tag="SB799_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790832.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
     gene            3356..5146
                     /locus_tag="SB799_000847"
     CDS             3356..5146
                     /locus_tag="SB799_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEG0868099.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDVKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLQINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     CSYSRKEKLALVRQKMKNLNVTSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KALLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLINS
                     LDKSVKIIQEINPSTHLKAVKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIENKELIS
                     ELDIDAKASEFRAQSKHYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDIAMPLLDAITRA
                     PLWKEQIDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLAIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDYPKALVWLEKRTKAIF"
     gene            complement(5266..7074)
                     /gene="mrdA"
                     /locus_tag="SB799_000848"
     CDS             complement(5266..7074)
                     /gene="mrdA"
                     /locus_tag="SB799_000848"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEG0868100.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLPPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELTNLFPDLNA
                     SKLAEIYKRNDSYYNQDFIKVVDFIPYDEIIPHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQE
                     VEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTQY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIG
                     FGAKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKGGEVIPHFLKSIENNNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQ
                     GGTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSK
                     PKYVVTVLLEHGGRNITSGATVAKIYQKMIELGYFK"
     gene            complement(7075..7569)
                     /locus_tag="SB799_000849"
     CDS             complement(7075..7569)
                     /locus_tag="SB799_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868101.1"
                     /translation="MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYAPLLYGIFF
                     CYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIK
                     TNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFF
                     KGKI"
     gene            complement(7566..8162)
                     /locus_tag="SB799_000850"
     CDS             complement(7566..8162)
                     /locus_tag="SB799_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEG0868102.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKDSILVSNLNKFGLDSLEDIIIDQTLGLGK"
     gene            complement(8159..8620)
                     /locus_tag="SB799_000851"
     CDS             complement(8159..8620)
                     /locus_tag="SB799_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEG0868103.1"
                     /translation="MVARQIILLLVCVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            complement(8602..9117)
                     /locus_tag="SB799_000852"
     CDS             complement(8602..9117)
                     /locus_tag="SB799_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868104.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNTSTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGANNVKIISQEVEYEPKNKVLYTNTDFKALINGSIINGNTLNYDVKNKILN
                     IQGVNAWLQDK"
     gene            complement(9108..9596)
                     /locus_tag="SB799_000853"
     CDS             complement(9108..9596)
                     /locus_tag="SB799_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HEG0868105.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIEILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAVAQMIEILVEKNHLEEEWNKL
                     WL"
     gene            complement(9602..10429)
                     /locus_tag="SB799_000854"
     CDS             complement(9602..10429)
                     /locus_tag="SB799_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEG0868106.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(10389..11507)
                     /locus_tag="SB799_000855"
     CDS             complement(10389..11507)
                     /locus_tag="SB799_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEG0868107.1"
                     /translation="MKKNLLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILSQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(11507..12322)
                     /locus_tag="SB799_000856"
     CDS             complement(11507..12322)
                     /locus_tag="SB799_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEG0868108.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAVGVHPYEIDNYDEKILRQYLYDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEDGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETD
                     APYLTPEPYRGKRNEPLLTQFVANKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            complement(12313..13557)
                     /gene="cbrR"
                     /locus_tag="SB799_000857"
     CDS             complement(12313..13557)
                     /gene="cbrR"
                     /locus_tag="SB799_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HEG0868109.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVILAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLIQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDHCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLV
                     DKASKILSQAKDNGKDRVEVCS"
     gene            complement(13661..>14114)
                     /locus_tag="SB799_000858"
     CDS             complement(13661..>14114)
                     /locus_tag="SB799_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HEG0868110.1"
                     /translation="SLTLKENEKISILGKDEIILDINLAHLKNLSSGELNRLRLAFIA
                     TECKILNAGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHLPQLSSKAHN
                     HFLVEKNGEESKVKKLDQEERIKELARMVSGELVSYEAIEFAKTLFKN"
BASE COUNT         4910 a         2335 c         1829 g         5040 t
ORIGIN      
        1 aaatatttaa aaatattgta atttaattat ttttctatta ctattagtta aaatatttta
       61 agcataaaaa agaaaggtat tgggaagtga ctaaacaaga aatacaaaaa ctcgatacaa
      121 atttcctagg tcatcccaag cctttattct ctctatcaat ggtagaactt tgggaaagat
      181 ttgcttttta tggcatacga tctttacttg tgcttttcat ggcaacaacc ataagcaaag
      241 gtggacttgg aataagcact gaatacgcct cggcaattta tggcattttt gcaggatgct
      301 tgtatttagc agcacttcct ggaggctgga ttactgataa ttatttaggg caaaaaaagg
      361 ctttatttct aggttctttt attatagctt taggacatat tagcatagcc ttatctattt
      421 taagcacacc tatatttttc ctaggactta cttttatcgt tattggtact ggatttttta
      481 aaactagcgc ttctgtaaca gttggaatgt tgtataaaca aaatgataca agatgcgata
      541 ctggctatac gattttttat ataggaatta acattggagc attcattgct cctcttatat
      601 gtggttttgt tcaagcaaaa tggaattatc atttaggatt tggcatagga ggtttaggta
      661 tgctaatctc tttgcttatt ttatatttta aagctacccc tgaacttgaa gaatttcata
      721 aaaattgtac tttaaagcaa aactgggaac aaccatttaa aaaaagtaaa aatttaactc
      781 ttatactaag tataagcttg ttaagtatta ttggattttt tctaattttt attaatcttg
      841 cagatattaa tcccataata ctatcaaaaa aacttctaat tgtaatttta ctatgtttgg
      901 taatttattt catatatctt tttgttttta aaaccttaaa taaaagagaa aaacagcaat
      961 taacaatttt aattgtttta ttctttgtag ccactttttt ttggagcact tttgaacaaa
     1021 aacctaccgc ttataatctt tttgcgcaag attttacaaa tagaaatatt tttgattgga
     1081 aaattccaac aaactggttt caatctttta atccaatttt tatcatcata cttgctccta
     1141 tagcaagtta tatttggata tttttagaga aaaaaaatat atatttttct tccattggaa
     1201 aatttacttt aggaatatta tttgccggca ttggttttat gatgatgacc tttgcttcac
     1261 aaaatctaat aaacaacaat ggtttgccaa tatccatggt ttggattatc ataagtatat
     1321 tctttttaac acttggggaa ttatgcgtgt ctcctgttgg actctctata atggctaagg
     1381 ttgcccctga tttaatcaaa aatcaaatca tgggactttg gtttgtagca agtgcacttg
     1441 gaaattttgt tgcaggactt ataggaggaa atgtcaatat taaaaacatc gatcaacttc
     1501 ctaatatttt tggacaatgc atgtggatgc tttttgttgt agcgctttta ctttttattg
     1561 ctaaaaaacc aatttataaa attcttaacg aaaaaaataa gcaattatct aactaaactt
     1621 aaaatacaaa atacaccaaa gttgaaaatt gatcttaata tttctttttt tatatttgca
     1681 aaaaaagtaa cattatgata taaatcattt aaaaatatta caaagttata catatttttt
     1741 aatttcttgt ctataattta taaataaaaa tacacaaagg atataaattg agtaaaaatg
     1801 taaaaaattt agatacttca ttttttggac atccaaaacc acttttatct ctttcactca
     1861 ctgagctttg ggaaagattt tctttttacg gaattcgtcc cttgctttac ctttttatga
     1921 tagcaagttt tgaaaaaagt ggaatgaact taaaacctga agaagcaagt gcaattatgg
     1981 gaatttttgc aagttgttta tatcttgctg ctttgccagg tggatggctt gcggataatt
     2041 acttaggaca aaaaagagca attttactag gtgctttaac tatagcattt ggacatttgt
     2101 gcatagcctt ttcttatttt aacaataaaa taatttttgt tggtatggtt tttttggtta
     2161 taggtacagg actttttaaa acttgtgctt ctgtaatggt tggaatgctt tataaaaaaa
     2221 tgatgcaagg cgtgactctg gttttactct tttttatatg tgctttaatt ttggtgcttt
     2281 tgtagctcct ttaatttgcg gctttttaca aaaagaatac ggatggcatt ttggttttgg
     2341 tgcaggtggg attggtatgc ttttagcggt aattattttc tacctaaaaa ctatgcctga
     2401 tttaaaagaa tttgatgaaa aagttggcat agactctact tgggatagac caagcaaaaa
     2461 aagcaaaaac gcattttaca tcatcattgt atcaggtatt gttttgcttg gagcaatatt
     2521 tttaatcctt ggtggtttta taaaattaga tgcacaagtt attaataaaa atattattct
     2581 aactatctta gcttgtgctg gaatttattt tttatatctt ttcgctttta cttctttaaa
     2641 aatagaagaa aaaagaaatt taattatttt tattgtttta tttttagcgg ctgcgttatt
     2701 ttggtcagta tatgagcaac aatacacttc ttttaatttt tttgcagaaa aattaacgga
     2761 taaaaccata ttaaattatg aaattcctac aatatggttt caatctcttg gaggtttatt
     2821 tgttatactt tttgcacctt ttagtgcttt tatatggact atatgtgcca aaaataataa
     2881 agaaatttca tctattatta aatttgcatt aggacttttg ggtgcagctt tggcattttt
     2941 aataatggct ttagcttcaa atcatgcaat tagtttaaat ggcgatgcta atacattaag
     3001 agaaaattta gaaaattcat cacaaattat tttagtttca ccttggtggc ttgtcagtag
     3061 ctttttgctt atggttttag gagagctttg cctttcccct gtgggacttt ctataatgac
     3121 aaaaattgca cctaatttaa ttaaatctca agtcatggga ctttggtttg tagcaagtgc
     3181 attaggcaat gctttagctg gattcatagg tggtaaagca agtgaagaaa atatagctta
     3241 tttgccaaat ttattttacc aatgtatgtg gatattactt ggtgctgtta taattttact
     3301 tatactcaaa aaacctatca ataaaatact aaaaaattaa tattaaggag aaaatatgag
     3361 tatttacaaa caaagagtat tagaacttag aagattaatg aaagaaaata atattgacgc
     3421 ctatctcatc ttaagcgcgg atcctcattt gagcgaatat ttaccagaat attacaaaaa
     3481 cagagtcttt atcagtggct ttaagggttc tgttggaaca gttcttatca cacaagaaga
     3541 gggctttttg tgggtagatg gaagatattg gcttcaagca caaaaggaat tagaaggtag
     3601 tggcatactt ttacaaaagc aagatgttaa aaatactttt accaaatggt tggaaaaaaa
     3661 tttaagcgaa gatcaaattt taggcatcga ttttgcactt ttacctttat ctttgcaaaa
     3721 agatttacag attaattgca aggcaaattt aaaacatata gatttgataa gtccactttg
     3781 gaaagatcgt cccactttac cacaagaaaa aatttatgaa cacgaactag aatactgctc
     3841 ttactcaaga aaagaaaaat tagcattagt gcgtcaaaaa atgaaaaatt taaatgttac
     3901 ctctcattta atctccagcc ttgatgatat agcttggctt acaaatttaa gagggaatga
     3961 tgtaaattat aatcctgtat ttttaagtca tttgctaatc ttggaagaca aagctttgct
     4021 ttttgttgat cagaaaaaag taaattcaga acttgaaaaa aaattaaatt tagatgggtt
     4081 ttggcttaaa aattatgatg aaatcatcat ggagcttgaa aaacttgcaa atacaaattt
     4141 gcttattgaa ccttcaaaaa tgaccgcttt actcataaat tctttagaca aaagcgtaaa
     4201 aatcattcaa gaaattaatc caagcactca cttaaaagca gttaaaaata caaaagaaat
     4261 agcgcatata caagatgcta tgatagaaga tggagtggct ttatgtaaat tttttgcatg
     4321 gcttgaagaa gcgatagaaa ataaagaatt aataagcgaa ttagacatag atgctaaagc
     4381 aagcgaattt agagcacaaa gcaagcacta cataagtgat agttttgcca ctatagcagg
     4441 ctttaacgaa aacgcagcat atccacatta taaagccaca aaagagagtt ttgcttatct
     4501 taaaaaagat gggcttttac ttattgattc tggtggacaa tataaaaacg gcacaacaga
     4561 tattacacgc gttgtaccaa taggaaaggc taatgcagaa caaattcatg actatacctt
     4621 ggttttaaaa gcacatattg ccatttccag tgcaattttt ccaaaagata tagctatgcc
     4681 cttacttgat gcaatcacac gcgcaccttt atggaaagaa caaattgact atatacacgg
     4741 cacaggacat ggcgtgggat attttttaaa tgtccatgaa ggtccacaag ttttatctta
     4801 tctatcccct gtgcttgaaa aaacaaaagc caaagaaggt atgctaacct ccatagaacc
     4861 aggtatttat aaagtaggta aatggggtat aagacttgaa aatttagcta ttcataccaa
     4921 agtagaaaat cctaaaaata aagattttgg agagttttta tactttaaac ctgttactct
     4981 ttgtcctttt gaaatatctt gtattgatac aaaaatgtta gatgaaaaag aaaaagaatg
     5041 gttaaacaat tatcacaaag aagtatttga aaaactttct cctaagctag gtgattatcc
     5101 aaaagctcta gtttggcttg aaaaaagaac aaaagccatc ttttaagata cttttgttaa
     5161 catagataaa ttttccttgt attaaactta taatttgttt aatacaaggt ttttaaacca
     5221 attgctaaaa aagttttttt gaaaaactca atttacaact aaaaattatt taaaatatcc
     5281 aagttcaatc attttttgat aaattttagc tacagttgcc cctgaagtaa tatttctccc
     5341 accatgttcc aaaagaacgg taactacata ttttggctta gaataaggag cataagaagt
     5401 aagccacgca tgagatctag tataatactc aaattgtttt tcatcgaccc tatttttatc
     5461 tgtttgtgaa aatcccacaa cctgagcagt tcctgttttt gctgcaactt tcacatcaag
     5521 attatgcaaa taacgataag aagttcctcc ttgctcatta gcaacagcat acattgcatc
     5581 tcttatataa ggcaattgac tcttttcaaa taaagtaaaa atttcttttt tattttcatc
     5641 catttgattt tctatagttg tattattatt attttctatg ctttttaaaa aatgaggtat
     5701 aacctctcca ccttttgcga tttgagccgt atatctagca atttgcatag gtgttgcaag
     5761 aaaattacct tgacctatag ctgtatttaa agtatcacct tgaaaccaag attgtctata
     5821 tctttgcatc ttccattctt tgcttggtaa agttcctaca aattcactag gtaaatctac
     5881 ccctgttttc gctccaaagc caatgcgaga taaagtttca cttatttgat cgattccaac
     5941 ttgcaaactg ccattataaa aataaacatc acaactatat tttatcgcat gttttaaatc
     6001 cacaggtcca tggcccgatc gattccaaca tctaaaaaac ctgcctccaa gctcaatgct
     6061 tccattgcaa acatattgag tcgacgggct aatattttta gaatttaaaa aagaaagccc
     6121 tactcccatt tttacaacag aacctggagg ataatatcca tttataagtt tatttgtaaa
     6181 aggatgatca agactatttg aaagctcatc ccaatcctta aaagaaatcc ctgttacaaa
     6241 aggattaaga tcatattcag ggaaactccc tgcagctaaa atagatccat catttacatt
     6301 cataattata gcagctccag cattcccttc aaacaatgaa gttaaataag actgaagctc
     6361 tatatctatc gtaagttcta tatcattaga catagcagga gtgtaagaaa gctgttctac
     6421 ttcttgattt aaggcattaa ccttataaac cctagttcct ttttctcctt gtaaaatatc
     6481 attataatag cgttctatac cgctttttcc cgtatagtta gaaagttttg ctatttcatt
     6541 ttcttgaaca tcttgcaaat ttgccttacc tacataccca ataatatgcg aagccaattt
     6601 tccaaaagga tattttcttt ttacaacagg atctattttt attgttttat taagatttaa
     6661 ctctgaataa tgcggaataa tctcatcata gggtataaaa tctactactt taataaaatc
     6721 ttgattatag taagaatcat ttctcttata aatttctgct aatttactag catttaaatc
     6781 gggaaataaa tttgtaagtt cagataattc tttatctaaa attcctttat ttgacttttt
     6841 aatactcaaa taaggtttaa tagaaatact aaaacccaaa tcattaatag ccaataaagt
     6901 tccatttcta tctgtaattt gacccctaac aggtggtaaa aattcagttt ttatggcatt
     6961 ttgtttagca agctcttcat aatatacatt tgattttata ctcaaataat acacacgact
     7021 taataaaaat ataaaaaaca atagtataaa tccaacaact aaacgcattc tcatttaaat
     7081 tttaccttta aaaaacacat aagctaaaca acattctata aaaactgaaa caatatacgc
     7141 ccatcctaaa attttaattt tttcatctcc aatataagac aatatcatat ccaaaaacaa
     7201 aataatgccg taagcacaaa gcacaaaaac aacagggata aatttaccaa tttttaaatt
     7261 tgtcttaatc caatctgcac aaagataata aaaaataaaa aatgccaacc aagatgaaaa
     7321 aataaaaaaa ttataagtta tatcagtaaa aaataaaaaa aataaagaaa aataccatct
     7381 aaaatcaagc tttgaaaaag ttctttctct ctcttctagt aagcaaaaca tataacagaa
     7441 aaaaatccca taaagtaacg gagcatatac aaaagtcgaa ccaagaatct gatagattag
     7501 aaaaaaaaat cctaaaaaga cataagctcc attaaatttt gctttataag cacttaaatt
     7561 tcttctcatt taccaagacc taaagtttga tcgataataa tatcttctaa agaatcaagg
     7621 ccaaatttat tcaaatttga aactaaaata gagtctttaa attcattttt taacttagct
     7681 ttttcacttt gatttaattt atcgcatttg gtaaaaactt ttaaaatttt ttgatcaggt
     7741 cgtaaaaatc ttttcaaata gtcatttaaa tttacatcga tctctaaatg agtatgtctt
     7801 gagtcgatta aatgtataaa taactttatc gaggttctta attttaaaaa ttcatctaag
     7861 ttttgattcc atatttcttt taaattttta gaaacctttg cataaccaaa ccctggcaaa
     7921 tcgataaaat tgatattaaa tttttcttca tttcttttac aagttacttc gaaaaaattt
     7981 ataagctgag tttttccagg agttgccgaa cttttggcta aatttttttg tttacacaaa
     8041 gaattgatta aagaactttt tccgacattg gaacgcccca aaaatgctac ttcactaaaa
     8101 tttgagctca aattctcatc aaatttcact aaagaagtga taaatttagc actaattatc
     8161 atttgtcttt aagatcaaat acaaaacgag caggtttttg atccttgctc tctactcgat
     8221 aaatattagc ttttctatcg actattattt tatcaccaaa aagtttttga ttgcttccaa
     8281 gctcatttat ataagcatgg ccattaatct cgtaagtatc tttaataaca ttataaataa
     8341 atttatctcc actaccttta taagttttac cttttaaaac aatcttaaac ctagcgtttt
     8401 gcattgcttc ataacgaata ggtttgcgat ttttatccgt ataaataatc aatttttcag
     8461 aatttaaaat atcatcaccc ctaattactt ctacatttcc actaagaata ctttcaccct
     8521 tattttcatc tgaataaaaa tttaaagctt ttacttcaat ttgagttgcc caagttacac
     8581 ttacacaaac taacaataaa attatttgtc ttgcaaccac gcgtttactc cttggatatt
     8641 taaaattttg ttttttacat catagtttaa agtatttccg ttaataatac ttccattaat
     8701 tagagcttta aaatcagtat ttgtatatag aactttattc ttaggttcgt attctacctc
     8761 ttgggaaata attttgacat tattagcacc tatataagta acatttcctt caaataaaac
     8821 cttgctcata tctttattaa aaaattctaa acgatttgca ctaagattaa aatctaaatt
     8881 taaagtaata aaatcattaa attcatctct atctgcatat ctcacccaag aatttgcctt
     8941 ataatatgcc ttaattgtac tagtattact ctcataagct ttcaaatttt tagcctcaat
     9001 atttttaaaa tttaaagcat tagtttgcaa attcaaagaa tatggatctt gcaaacttaa
     9061 aatcgtaaaa gtaattgtaa aaagagcaat taaaattcca aaaattttta tagccaaagc
     9121 ttattccatt cttcttctag atgatttttt tctactaaaa tttctatcat ctgtgctaca
     9181 gcagccttac cacctttttt gctaagcact atgtctacat ttaaatcttt atgaccatct
     9241 tttggcttaa aactaagtcc tacactttca agcaaagcct tatcgttaaa ataatcccca
     9301 atagccgcac actgagaaaa atctaaatta agtttttgta aaatttcttt tgcacaagct
     9361 aacttatcct tgatgccttg atataaaatt tctattttta aatctttagc tcttttttca
     9421 acacaaggac aatttctacc tgtaataata gcaatttttt taccaagctt tagccaagcc
     9481 tcgatagccg ctccatcttt tacatcaaat tctttaataa attctccatt agaagtataa
     9541 ataatcttcc catcagttaa acagccatct acatccaaaa aaatcaattc tgtcataatt
     9601 tctactctct tacaacaaat gcacctgcaa atgcaccact tgcagcaaaa tctcttgctt
     9661 catcttcact tctaaagcct gttaagaaaa cgcgatttaa cccatccact gagcttgtgc
     9721 gtatagtaga gctataagtt ctataagttt tatatcttgc tgctatcgtt tgtgctccag
     9781 ctgggttttt aaaggctcca atttgaacca tgaaatttcc accttcataa atttgtccat
     9841 tatttgcaat ctctccacta tttccatagt ttacattaga atgtacaata ttattacccg
     9901 aattacttga tccaaaccct ataacctcaa gccttactgg agctgttcct gaagcaatca
     9961 tatcaatttg actagcagct ccttttgata aatctataat acgattattt acaaaaggac
    10021 ctctatcatt cacacgaacg gtaacttgac gattgttatt tagattggtt acttttaaga
    10081 tggtattcat aggtaaagtt ttatgagccg cggttaaagc attttgatta taggtttcgc
    10141 cattagaggt tttcttgccg tgaaagcctg gcccatacca actcgcaata ccatcagcag
    10201 tttcgcctac tgctacaaca gtaggataat aagttttacc gttgatagta taaggcttca
    10261 ttgttccttt agtccctgaa gaactaggac tgcttttaaa atcatttgaa ggataataca
    10321 cttgagcatt atccaagcta gaaaaaaaac tagtgcctaa acaaccacta aaaaataaag
    10381 cccctagact aacggctgac aactttagtg taattgtttt tatttgcatt tttattctcc
    10441 ttgattggta taattaattt ttgattaatg ctaagatgat tttttgctat tttattgaat
    10501 tctcgaattt catcaacact tatattataa ttttttgcta ttttatataa agagtcacca
    10561 gacttaacgg tataagttct tgtcataggt atagttgtat caacctttgc aagtttttct
    10621 gctttaaaat ttttatcaaa aaatgctact ttattaagtg gtatatacat ataataccct
    10681 ttaccaggag gcgtaaaatt atgtttaaat tgtggattat atttcttaaa agttgcaaga
    10741 tccatattta aatttttagc tatttctttt aaagatgcag aagaaggcac atcaactttt
    10801 gcaaattcat tgcttaaagc ataattcatt aaagacgcat ctttatctag taaaaaatcc
    10861 ctatcattag ctaaaaaagc aagcgttaaa atctttctta taaaatttct agtttctaaa
    10921 gaaagatatt tcttatcagg gttcaataaa acacttaaat catcacttcc tgcttgcttg
    10981 atagcttgtc ttagcttgcc atttccgcaa ttataagcta aaagtgccaa ataccatttg
    11041 ccaaattctt cttttaactc ttttaaataa tttgtagcgg cataagttga cttgaccgga
    11101 tcacgccttt catcaacata agcatcgatt cttaaaccca aatttctagc tgttggttgc
    11161 ataaattgcc aaacccctac agccttggca ttagaaacac tatgagtttt caagcctgat
    11221 tcaaccatag ctagatacaa aatctcatca ggaacttcct gctgggataa aatttttctt
    11281 atcataggag taacttttga aaaattttgc atactatcta ttaaagtttg agcatgtttt
    11341 gattttatat cttgttgagt ttgcacaaaa atcaaatcac taataaaact tggattaata
    11401 tctaaatttc ttaaaacatt catttgtctt tcataaaatt caggagtatt aatttgtgca
    11461 aaaagaaaat taaaacatat taaaaaacac aataaatttt ttttcattaa taacctttaa
    11521 aaaataattt ttcagaattg ttaaaacaaa tttctagaag ctcttttctt gataaattca
    11581 atacttcaca cattttgttt gctacaaatt gagttaacaa aggttcattt cttttaccgc
    11641 gataaggctc tggagtaaga tatggagcat cagtttcaag tagtagtcta tcttttggaa
    11701 ttttaggtaa aatttcaact aatttcttag catttttaaa agttaaaact cccccaatac
    11761 caaaataaaa tccatcttca aaaagagtta gcaaatgttc gcttgcatta aagcagtgta
    11821 aaactcctcc tacaagatcc ttagaatacc catgtaaaat ctcataagta tcatgatttg
    11881 cttctcttga gtgaatgata acaggttttt taaattcaat agcaagttca agctgtgcga
    11941 taaaaatctt tttttgattt tctttttctt tttgaatttc ttcagcaaga tcacttttaa
    12001 aacggaaata atcaagccca cattcaccta cagctacaca cttttcatcg tataaatact
    12061 gccttaaaat tttctcatca taattatcaa tttcataagg atgcacccct actgcaaaaa
    12121 aaatattttt atatttatga gcaattgtag ctgcataggg caaatctttt atatcagcac
    12181 caggtatgat gattttctct ataccatttt taaaagcacg atttaaagtt tcatctaaat
    12241 catctttaaa tgcttcactg tctagatggc aatgtgtatc aacaatcctt aaaccatctt
    12301 gaaaatcaag atttaagaac atacttcaac tctatccttg ccattatctt ttgcttgaga
    12361 caatatttta cttgctttat caaccaaaga atcaatctta tctccacttt ttccaaaaac
    12421 cacgcctata gaagctgtaa aaaagacttc atctaaatta actaaaacac cagccttttt
    12481 tatatttact cgtatacgag aaaagatttt aatcgctctt tcttgggata tatttttaag
    12541 taaaatacaa attttttctg cactatatct acctacaaga tctcttcctt tagtttcatt
    12601 gactatttca ttagcacaga ttttaattac ttcatcacca acttcacgac cgtattcatc
    12661 gttaatcatt tgaagattat ctatatctaa gaaagcaaaa gcaaattcct cgtcttttgt
    12721 tgctatttcg ttaaaataat catctattcc atcgattaaa gcattataat ttttaacccc
    12781 agatacagga tctaaaacat tataagtgct taaaaatttt ttatcatcca tgtaagataa
    12841 acaatgatct aagcgacaat taaaactttc tttgcttaaa ggcttaaaca aatactcatt
    12901 aactccattt ttaaaagaat tcgcttcaaa tgaatcatta tgatctccca aaagaatcac
    12961 acctaattca tcatcactaa aacgttctct tacttgaatc aaaagctcaa aaccgctaat
    13021 tactggcata ttgacatctg ctataataag cttaacatca ttattatcat ttaaataact
    13081 cattgcttct tcaccatgag ctgcagctaa aacattaaat tgtctttgag taagtatttt
    13141 tttaatttca ttacgttcag gtagcttgct catagctaaa atcactttag tttttgcata
    13201 ttgattaagt tttacaatag aactaataat ctcatcaatg caagtttcac tttctttaaa
    13261 aatataatct aatatatctt tatccataaa tttttcttta gtagccttat caccactagc
    13321 tgtaagaaca atagcaggaa ttttcttttc aataacataa tccacaactt caccatttgg
    13381 ggcatctggc aaacataaat ccacaaaagc taaaaaataa tcattattca ttaattcctt
    13441 agcttcggca aaaccaaaag caatatctac ctcataatct aaagtcattt gaattttttt
    13501 agctaaaagt ttgccgagca ttttattgtc atcaataatt aaaattttct tattcatagt
    13561 gtgtaaaata cctttatatc taaaattttt aatatatttg tttcaaaaga aaggaaattt
    13621 tatagttgta tattttaaca tagcaaaata aaaaatccgc ttaattctta aacaaggtct
    13681 tagcaaattc gattgcttca taactaacaa gctctccact taccatccta gcaagctctt
    13741 taattctttc ttcttgatca agctttttta ccttactttc ttcgccattt ttttcaacta
    13801 aaaaatgatt atgcgcctta gaggaaagtt gaggcaaatg agaaatagca aaaatttgat
    13861 aaaacttaga aagctcctct aaaaccttgg ctatactcat agcctctttt ccgcttaaat
    13921 ttgcatcaat ttcatctaaa aataatatcc ctttacctgc atttaaaatt ttacattctg
    13981 tggctataaa agcaagtctt aagcgattta attcacccga acttaaattt tttaaatgag
    14041 ctaaattaat atctagtatt atctcatctt tacctaaaat tgaaattttt tcattttctt
    14101 taagtgtcaa actt
//
LOCUS       DARBAC010000038        13929 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.038, whole genome shotgun sequence.
ACCESSION   DARBAC010000038 DARBAC010000000
VERSION     DARBAC010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13929
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.038"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..441)
                     /locus_tag="SB799_000859"
     CDS             complement(<1..441)
                     /locus_tag="SB799_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HEG0868111.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKS"
     gene            complement(441..992)
                     /locus_tag="SB799_000860"
     CDS             complement(441..992)
                     /locus_tag="SB799_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HEG0868112.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            complement(1085..1603)
                     /locus_tag="SB799_000861"
     CDS             complement(1085..1603)
                     /locus_tag="SB799_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HEG0868113.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            complement(1596..2024)
                     /locus_tag="SB799_000862"
     CDS             complement(1596..2024)
                     /locus_tag="SB799_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HEG0868114.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEYEKAYELSRQEC
                     ENLGVLPKSGSIAELRSNLSMAQVGREALARAREKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            complement(2021..3271)
                     /locus_tag="SB799_000863"
     CDS             complement(2021..3271)
                     /locus_tag="SB799_000863"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEG0868115.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALMK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYATRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            complement(3299..3396)
                     /locus_tag="SB799_000864"
     tRNA            complement(3299..3396)
                     /locus_tag="SB799_000864"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3360..3362),aa:Sec,seq:tca)
     gene            3537..4745
                     /gene="yedE"
                     /locus_tag="SB799_000865"
     CDS             3537..4745
                     /gene="yedE"
                     /locus_tag="SB799_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HEG0868116.1"
                     /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWAYRAFEGQSHFMIV
                     GIANIIGTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILIFAFVVFYK
                     KYFFKNQLKG"
     gene            4749..4976
                     /gene="yedF"
                     /locus_tag="SB799_000866"
     CDS             4749..4976
                     /gene="yedF"
                     /locus_tag="SB799_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEG0868117.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLQSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(4992..6461)
                     /gene="putP"
                     /locus_tag="SB799_000867"
     CDS             complement(4992..6461)
                     /gene="putP"
                     /locus_tag="SB799_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEG0868118.1"
                     /translation="MEVVQINTPIAVMFVAYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGVISIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHVVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLAASVVIIIASLFTNVRSGTKAAYEKMLKEL"
     gene            complement(6479..9967)
                     /locus_tag="SB799_000868"
     CDS             complement(6479..9967)
                     /locus_tag="SB799_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEG0868119.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANASVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFDYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYEYLKKLFSFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQKGWELPTFYKKIDTDSNYNKMLDFILEGDNHKYIN
                     IGIASHNIFEIAYAYTRISEAGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDENWKAQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYESKKFSNESDTDFILAQNRAWAKEIKAKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVK
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDAGI
                     PKDALIFLPSKGSDISKYLLVDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYNDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLENNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGVKKSAIGLGRKVGIYNYITQFLEIKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFMNDLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVILGANIANIDLSISYDEQDISMIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            complement(10097..11119)
                     /gene="selD"
                     /locus_tag="SB799_000869"
     CDS             complement(10097..11119)
                     /gene="selD"
                     /locus_tag="SB799_000869"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(11069..11071),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEG0868120.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDINILKELLEGANDKVQECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTAKVGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKSMMELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESKLPFLDGVKEYFNMGLIPAGAYKNLEF
                     IKELIPDLNEEKLLLCDPQTSGGLLISISEKESLECLKKLEDENIQAKIIAKVVNKQE
                     NDIIIS"
     gene            complement(11129..11701)
                     /gene="yedF"
                     /locus_tag="SB799_000870"
     CDS             complement(11129..11701)
                     /gene="yedF"
                     /locus_tag="SB799_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HEG0868121.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVV
                     KFLNSLNLNPIIDENAQEFCIKVQKKNFNSSEVNIHDYNVLFLKTDKVGEGELGQNLL
                     VGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFF
                     NKSKELKIGNIGNAYEILNELFGKAKIITL"
     gene            complement(11813..13915)
                     /gene="ccaA"
                     /locus_tag="SB799_000871"
     CDS             complement(11813..13915)
                     /gene="ccaA"
                     /locus_tag="SB799_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HEG0868122.1"
                     /translation="MFKSLNIGLKLIFSVATVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAMPIFDRKNQVVGVIGMTLD
                     FSAIATYLLDPKSQKYNGELRILLNSDGLVAIHPNKNLVLKNLKDVNPNKGAQETYKA
                     MSEGKNGVFNYIAFDGDDSYAAINSFKVQDSSWTVLVTAPKYSVFEPLKKLQLIIIGA
                     SFIFIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGA
                     MGRIINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKNVL
                     NRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEVLDAKGEVEITTNILGKEIKKMLVA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITN
                     EVNQIAAAILEDVDKKRF"
BASE COUNT         4577 a         2556 c         1731 g         5065 t
ORIGIN      
        1 tgatttttct aaggcgattt ttaaatcttc tttatttgaa atttcagttg aaattacagc
       61 tcttaaattg ccattatttc ttatcatttt tactagatat ctcgtatcaa gttcataaat
      121 tcctattttt ccatgttttt caagataatc ttgcagactt tctttagcgc gaaaatttga
      181 aaaactagaa cttaattcac gcattaaaac accacttgca aaaatttcct tactttcatt
      241 atcattttca ttggttccca ctataccaat ttctggcatg gaaaatacga taaattgccc
      301 tgcataagaa ggatctgaaa taatttcttg ataccctgtt aaagaagtgt taaacacaag
      361 ctctccaaaa aaagtaccgc tctttccaaa agccttagca cttaaaaaaa tatcattttc
      421 taaataaata taagccttca ttaaaacata cctttttttc taagctcttc ttgatagagt
      481 ttttcaaaga taagatcgta ttcttcgcta cctggaatag gttttgtttt ataattgcta
      541 attttctcat aaacctcatc ttcaagtttt tcataaattt taagataaga ctctatgctt
      601 gaaaagatta aatttttaac tctattttca ctcactataa aattaatata atcattctct
      661 acaagttctt ccaaaatttg atgcgctaga tgattatgtc tatcttcaga atctaaaatc
      721 acattaaatt caggagctaa ctttttcttc acaagccaaa acatattttt acgatctact
      781 tgcataagct ccatttcatc ttcttgttgc tctaaaagct cttttactct ttcatctaat
      841 tttctttcat ttagaatatc tttctctaaa acttctatta tacatacctt aagcttttct
      901 aattgatctt taatttctac aaaagaagaa ttagctatat ctaacatcat tttatttgcg
      961 atataaggaa tatgtggtaa ttttatacgc atcttgaaaa ccttttattt aataatgttt
     1021 gaaataatag cttatttttg gtaaaagaat gttaaaaatg aaaaattttc attcttttaa
     1081 tcacctaatt actagcatta ttatctaaat ttttcaaaag taaagtaagc tcgctagctt
     1141 tttttggatc cattttagat aaaacacctg aaattttacg cgattccaaa gaaagcatta
     1201 ttttacttgc atcctctgca tccatttgac ttaaaacatc tgcaatggct gcatctttca
     1261 tttgggaata aatttcttta accctacctt gagttttatc attgattgaa tttaaaatct
     1321 tttgttgttc ttctacaagc cttgcgtttt caagctttaa ttcttcaatt tttgccaaag
     1381 ttgcattaac ctcagcctct tttttttcta aattttcaag cctttctttt tgcaaagctt
     1441 caaaagaggc tttataagct tctaaagatt gtcttgcttc atcaaattct ctagtttgca
     1501 attcaatttg agcttttcta gcttcaaaat actgctcaca atcttgttca gctccaaaaa
     1561 ctacacttga aataaaaact aacaatataa attttttaat catctttttc tcctttgaaa
     1621 aaacgactga ttgcaatttc atctaaaaat ttttcttcag ccttggcaag ttctttttgc
     1681 ttttgtttaa tttcctcggc ttctaaaacc ttcatttttt cataatctaa atgtgctttt
     1741 tgatataaaa actgataatg attcatttct tttttagaaa gttctacttt ctccctagct
     1801 cttgctaaag cctcgcgtcc tacttgcgcc atacttaaat tcgatcttaa ctctgctata
     1861 gatcctgatt ttggcaatac gcctaaattt tcacactctt ggcgtgaaag ttcataagct
     1921 ttttcatatt caagctgtct ttgtttggct tgattaagat ttgattctgc tttatcaagt
     1981 tgttgttttc ttacttttac aacagaatta tatttacttt tcataagatg atagtatcat
     2041 ctctttcagg gctagtggaa atatacttta ccttaacccc tgcaagctct tcaagtcttg
     2101 ctatatattt tttagcattt tctggcaata aatcataatc ttttatacca aaaactttat
     2161 cccaaccatc catttcttca taaataggtt gaacattttc taaatcgctt ggtatatagt
     2221 cgatttccat acccttatat tcataagcac gacaaatttt tatcttttca aaaccatcta
     2281 aaacatcaag cttcatcaaa gataaagcat caagaccatt aagccttgct gtatatctta
     2341 cagcaactgc atcaaaccat ccacagcgtc ttttacgtcc cgtgcttacg ccaatttctt
     2401 ttccaatttg cgcaattttt tctccatctt cacccttatc ctcagtagga aaagctccat
     2461 ttcccacacg cgttgcataa gcttttacaa tacctataat atttcccgct tctttaggat
     2521 ttaacccaag tcctgttaaa gcacctgctg aaatagtact tgagcttgta acataaggat
     2581 aagttccatg atcaatatca agcatagagc cctgagctcc ttctaaaagt actcttttat
     2641 cttcatctaa agccttccaa agcattcttg tagtatctgt aatataagga gttaaaattt
     2701 cattaaaacg ttttaaatca gcaagcaatt cttcagcact tggaatttca atttcaagca
     2761 tttcaaaaaa agttttatta gcttcaaaat ctttcatcaa agcctcacaa agtctttgtg
     2821 gttctaaaag ctctccaact ctatgtcctg tacgattaat cttatctgca taagaaggtc
     2881 ctataccctt acctgttgtt cctatggcat ttttgccttt gagtttttct tttgcaatgt
     2941 ctattaaaga atgatgtttt aaatttaaat gagctctatc actgatatat aatctacctt
     3001 ttaaattttc aaattgagcc atttcagcaa tcaatacttc aggagaaacc acaactccat
     3061 ttccgataat attaatacat cttggatgca aaactccact tggcataaga tgaagcgcat
     3121 atcttacacc atttacccaa atcgtatgtc ctgcattgtg tccacctgca cttctgcaaa
     3181 caaaatcata attttcacat aatttatcaa ctaccttacc ttttccttca tcgccccatt
     3241 gaatgccgac aataatatct gctttgctca taaaaatttc cttgatttta cttaatattg
     3301 gcgagaagat gagagaatcg aactccccaa agaatagtca actatccttt catctgattt
     3361 gaagtcagtg gcgatcacca gatacgctaa tcttccaaag tgataattat agcgattttt
     3421 aatgaaaaac aaaataaatt tatcaatatt ctttttgact tcatgttaaa tttaagctat
     3481 aatctcactc tttttttagc atcaagtttt gatgattaca tttttaggat ctttctttga
     3541 attcttttaa acaaaaatat ttaatcaatt tttgggacaa ttcccgttct atgattgcac
     3601 ttggaatttt aagtgcagtg tattttggga tttttggtgg cgtttgggct gttactggag
     3661 aaatgacgcg ttggggtggt gaatttttag aacttttagg tatgaattta gatgggtatt
     3721 cttattacca aaagcaaaat ttaaatggaa cccctttaac aagaactgat ggtattatgc
     3781 tcataggtat gtttataggt tgtttagtag ccgcactttt agctaacaaa gtcaaatttc
     3841 gtctacctgc tagcaatata agaatttttc aagcaatagt aggtggaatt ctttcaggat
     3901 atggagcaag acttgcattt ggatgcaatt tagctaattt ttttacaggt ttaccttatt
     3961 tttctttaca cacttggctt tttactgttt ttatggtttt aggaatttat ctaggagtga
     4021 aaatttgcaa cacttccttt tttaaaccta aagctaaatt agaacgggta aataaagaaa
     4081 acttgccgct aaataagcaa agtttgcgta caaaactata ttttaactta ggcatattgc
     4141 ttttcatagc ctttttagtt tgggtgtttt atcttgtttt tacaaatggc aatatcagca
     4201 cacaaaacaa acaaagtctt ctagctttag cactgatttt tggttttgtt tttggctttg
     4261 ttatttctag aggacaaatt tgttttactt cttgctttag agatttattt ttatttggta
     4321 gagataatgc tataaaaggc gcattaattg gcatgattat cgcttcttta atcgcttttg
     4381 cttttatctt gcaaggtcat actagcaaac tcatagaact ttctcctgct gtagctgtgg
     4441 gagcattttt gtttggtttt ggcatagttt ttgccggagg ttgtgagtgt ggttgggctt
     4501 atcgtgcctt tgaaggacaa agtcatttta tgatagtagg aattgctaat ataataggaa
     4561 ctatgatttt agctttaagt tatgactttt taccaaaggc ttttaaagaa ggtataaaaa
     4621 tcaatctttt aaccgaattt ggcaatttaa atggattttt tatcaacctt attttattca
     4681 tcttaatatt tgcttttgta gtattttaca aaaaatactt ctttaaaaat caacttaaag
     4741 gataaacagt gaaaattact tatagtttaa atttacaagg tgaagcttgt ccttatcctg
     4801 ctatagcaac acttgatgtc ttacctaagc ttcaaagcgg agaaattttg gaagtgcttt
     4861 gtgattgccc acaaagtatc aattccatac ctcaagatgc aaaaaaccgt ggttttaaag
     4921 tgcttgaaat cgatcaaagt ggacccacgc taagattttt aatacaaaag ccttaaaaaa
     4981 ggcttttgtt ctcaaagctc ttttaacatc ttttcataag ctgctttagt tccagatctt
     5041 acatttgtaa ataaacttgc aataataatc accaccgaag ctgctaaaaa ccctggaact
     5101 atttcataaa gacccgaatt tgcaaaattc ttccaaagta ccacagtagc agctcctgtt
     5161 atcataccta agatcgctcc tactcttgtc atcctactcc aaaataaaga aaaaagcatt
     5221 acagaaccaa aagaagctcc aaatccagcc catgcataag aaactatact caaaacactt
     5281 gagtttttat cagtagaaat caaaaacgct attacagcta ctagtaaaac acctaattta
     5341 cctaaattta atacaacatg acttggcgca tcttctctaa aaatcttttt ataaaaatct
     5401 tccgctatag tagaacttga aaccagcaat tgtgaacttg ccgtactcat aatagccgct
     5461 aaaatagcac tgagtaaaat acctgctatc caaggattaa ataaaagctg cgacatcacg
     5521 atgaaaatct tttcaggatc ttgcaaactt aattcaaatt tatgcacata agctataccc
     5581 aaaataccta tcatacaagc acttaaaaga caaaccgcca tccaagcaat acctataaaa
     5641 gtggccatag gaatatcttt agtagaacga atcgacataa aacgcactaa aatatgtggt
     5701 tgaccaaaat aacccaaacc ccaagcaagt gcagatataa tacttataac tcccactcct
     5761 tcgcccatag ataaagcttg tggctttatt tctcttacta tattcatcgc ttcaccaaag
     5821 ccacctaaat gataaagcat aaccaaaggc acaatgatta aagccatcat cattaaaagc
     5881 ccttgtatca tatccgtcca acaaactgcc ttatatccac ctaaaaaagt ataagcaaca
     5941 ataataatcg ttccagtagt taaagcataa tcatatctga taccaaaagt actttcaaaa
     6001 agttttgctc cacttacaag ccctgatgaa acataaaagg taaaaaatat caaaattacc
     6061 accgcacata caatgcgtag tatgtgttta tcatcatcaa aacgagtttc aaaataatca
     6121 ggaatagtca aagaatttgc aatcacgctg gtataaattc taagtctttt tgccacaaaa
     6181 atccaattta aactagctcc tatagtaagt ccaattgcaa tataagaatc tataaagcca
     6241 cttacatata aagctcctgg taatcccatt aaaagccaac cactcatatc agaagcccct
     6301 gcgctaagtg cagatatcac aggccccata gtacgcccac ctaaaaaata atcttctgaa
     6361 tttttatttt gcttataaaa ataaaaacct atataaagca tcaataaggc ataagctaca
     6421 aacatcactg ctattggggt attaatttga actacttcca tcaatctctc cttgatcatt
     6481 aagatattgc tctaatgcct aaatttccat agcgatgaaa agatatactt aaagcttttt
     6541 cattaaaata atttaaaagt tcaaaacgac catttaacaa tggcttttct cttatgatga
     6601 ttttagcaag ctttgcagcc tctttataaa tctcatcatt tacatctggc tttgccaaat
     6661 aacgcactct ttcatattct ttaatactct tgataaaatt ttctttattt tcttttaaaa
     6721 ataatacttt tgctcctata ctttgaacaa ttcgttctat catactaata tcttgctcat
     6781 cataactgat acttagatca atatttgcaa tatttgcacc taaaatcacc cctaaaacat
     6841 cttttaagct ttcatttcca caaagtctta aaaccatatt ctttatttta gtataagaaa
     6901 aaagattatc ttctccacgt atattaacat aatcttttga aacactaaac tcatttttat
     6961 aatgataagc ataagattga gacattttaa ttaaatcgtt cataaaatct tgtgcttctt
     7021 ttaaatctat ttgtgctaat ttttttgaaa atttatcttc aattaaatga tcatcaaaat
     7081 cttcttgctt aatctctaaa aattgagtga tataattata aattcccact tttctaccca
     7141 aacctatagc tgatttttta acccctccaa aaggctgacg aaggactata gcacctgtgg
     7201 ttggtttgtt gatataaata tttcctgctt ctatatgagt gtgaaaatac tcccattctc
     7261 tttcatctaa gctttcaaaa cctgcagtta aaccataacc tgtggaattt actatatcaa
     7321 tagcttcttt taagtcttta gccttcatta cacttaaaat cggtacaaaa agttcattca
     7381 tatgagtaaa atcacccttt ttagtgccat attttatacc tggagtcatc aaataaggat
     7441 tattctctaa aaacttaggt tttaatgccc attcttcata aggttgtaat tcatctaagg
     7501 ccttttgaac tttagaactt ggcttatcag ccaaagtacc caatttattt ttaaattcaa
     7561 aaggattgcc cactgccata gaacttgcag catctactaa agtcttttta aattcttcat
     7621 cattataaac ctcttcttct aagactaaca aagaagtagc cgaacatttt tgaccactat
     7681 tgctaaaagc agaatgaatg atatttttaa tcgcactatc acgatcagca aatttagaaa
     7741 ctatagtcgc attctttccg cccgtttcag cacttaaaag caaggttgga ttagctttta
     7801 acatagcata agcagtatcc tcccctcctg taagaattga aaatttaatc gcttcatcaa
     7861 caagtaaata tttagaaata tcacttcctt ttgaaggtaa gaaaatcaaa gcgtcttttg
     7921 gaatacctgc atcccaaaaa cacttacaaa gcatataacc tgttagagtt gaaagtgaag
     7981 aaggtttgta aatcaccaca ttacctgcag ctagtggtgc agctatggtg cccactgaaa
     8041 tccctatagg aaaattccaa ggagctatgg taacccctat gcccttaggt gtgaatttaa
     8101 cttttggatt ttgtttttta agctcttcta aagagtgcgg ataaaactct ataaaatcaa
     8161 tagcctcact tacttcagga tcgatctcta aaaaggtttt gcccacttct aaagctgcca
     8221 aacctatcaa atcccctctt ctttctctca taagttttgc acttttagct aaaatttgat
     8281 aaatttcatc atgacttttt tgtgtaaatt tggaattttt agctacttct aaagcttgtt
     8341 tgatttcttt ttctccggct aaataagcct ttcctatcac tctatcttca atcttatctt
     8401 taacttctaa aacatttaaa ttttctgctt taaaatcaag ctcacctata acaggataaa
     8461 catcataatc ttttaaattt tcatatttag ctttaatttc tttagcccat gctctatttt
     8521 gcgctaaaat aaaatccgta tcactttcgt tgctaaattt tttactttca taagaactta
     8581 tgatatttga ttctttattt ctatcttgct tacgatgtgt agtattatca agcgttttta
     8641 tgccttctaa agattttaaa aaaagttctt tttgagcctt ccaattttca tctcctactt
     8701 taagattgaa aaaataacgc ataaaattat cttcacttgt attttcatca aggcgtctta
     8761 caagataagc aatggcattg ttaaaatgtg cttcatcgca aactggagca taaaggatta
     8821 aatcatgcat tttagataat tcataagaac attgcaaact cataccttca agcatttcaa
     8881 aagtaaaaga atctaaagca cccgcttcac ttatgcgtgt ataagcataa gcaatctcaa
     8941 agatattatg acttgcaatt cctatgttga tgtatttatg attatctcct tcaagaataa
     9001 aatcaagcat tttattataa ttgctatcag tatctatttt tttataaaaa gtaggaagtt
     9061 cccagccttt ttgagatgca atggtttctt cactttccat attagcaccc ttaacaaaac
     9121 ggatcttaat aggcttcata ccttttaaaa ccctctcttt tgaaaaagaa aaaagttttt
     9181 taagatactc ataagaatca ggaatataag cttgcaaaac aatgcccgct ttaatatcaa
     9241 atttggccac actttccata aaagctgcaa cggtgagttc taaatctcta aattcttcca
     9301 tatccagatt gataaattta gatacacctt gttttttctc ttcttctaag gctaaagcat
     9361 aaagataatc tagtcttttt actacctctt ctttggaata atcaaaatct ataatattaa
     9421 tttgtgaaaa aatcgtagta atttttatgg aaatataagt gatataactt gattttaaag
     9481 cctcttcata tttttgcata cgatatttac tctcagcttc acctaaaacc tcttcgccga
     9541 ttaaattcac atttaaggta attttatctt gctcttttct ttttttaata tgcggctcta
     9601 aaacactagc gtttgcatct agaaccatag ctttagtatc ttctcttaaa tgtttgacaa
     9661 aaaaaggtac acttaaatta ggagcaaatt tgccaaaatt taaaaagcta aaaagtagaa
     9721 atttttcaaa agtgctaaaa aaatccgcta tgccatattt actcaaagta tattctataa
     9781 gctcaaaact tgcattttta tctttgcatc taaaagaacg atctaaaagt tctataagca
     9841 taactttatt tttgggattg ttaagaagtt tttgcatttt agcatgaaat tctttttcag
     9901 aatttgaaat attggcttct atttgtcctt gcaattcttc agctaaggct aaagcttttt
     9961 gtatcatttc gtatctccta agataaaata aattttaata aataatatat aaataagata
    10021 aaaataatat tttaaatcat agaaaatgta taaaaaatga taaaaaaaat tttaatgggt
    10081 atataagtaa caaaaattaa gaaatgataa tatcattttc ttgcttattt acaaccttag
    10141 caataatttt agcttgaata ttttcatctt ctagtttttt taaacattct aaggattctt
    10201 tttcacttat agaaattaaa agtcctcctg aagtttgcgg atcacaaagt aataattttt
    10261 cttcatttaa atcagggata agttctttta taaattctaa atttttataa gctccagcag
    10321 gaattaaacc catattaaaa tactctttta ctccatctaa aaaaggaagt ttactttcaa
    10381 aaatttcaaa agaaatattt ttatttagca tttcttttaa atgtcctaaa agtccaaaac
    10441 ctgtgacatc actcatggca cttggatgaa atttaagagc aatttgactg gctttataat
    10501 ttaactccat catactttta agcattatat ctaaatgttt ttgatttaac atttgtgcct
    10561 ttaaagccgt acttaaaatt cctgttccta aaggcttggt taaaataata caatctccaa
    10621 ctttagccgt attattagca ataaatttac taggatgtac ttttcctgta acactaagtc
    10681 caaaaaaaag ctcagtgctt tctatagtat ggccacccac aactaaagca ttgcattctt
    10741 gaaccttatc atttgcacct tctaaaagct cttttaagat atttatatca tgattacaag
    10801 tatcaaaacc tactatattt aaggcattaa ttacctctgc acccatagca aaaacatcgc
    10861 ttaaagcatt tgctgcagca atagcaccaa aatgataagc actatctact ataggagtga
    10921 taaaatcaag cgtttgcacc aaagctaaat caggactgat ttgatatacg cttgcatctt
    10981 cattatttcc gatatcacta agtaaagcag gagttttttg catgaaattt aaaattgttt
    11041 taagaccacc cgggcttaat ttcgctgctc aacctgctgc tttaacaaaa tgggttaaat
    11101 tttgattttt atattgcagt gtttttcctt atagagtaat gatttttgct ttaccaaaaa
    11161 gctcgtttaa aatttcataa gcattgccta tatttcctat tttaagttct ttgcttttat
    11221 tgaaaaattc caaacaagct ccgcaactta tgatctcaat acctaaattt tcaagttctt
    11281 tcatagctaa atgtgcttta tgattttcat caacattgat taaaacactt tcatttacgc
    11341 aaagaatttt acttggagca tgatctaaat tttttaaggt acttaaaaat cctacaagta
    11401 aattttgtcc caattcaccc tcacccactt tgtcggtttt taaaaataaa acattataat
    11461 cgtgaatatt tacttcacta gaattaaaat tctttttttg tactttgatg caaaactctt
    11521 gtgcattttc atctataata ggatttaaat ttaaagagtt aagaaatttt acaacattat
    11581 tttttgaaat aatagaattt aaaacaattt ctaaaatttc attttcttga agtttttcaa
    11641 gagcgttttt tgtttcaact ataggctgag gacaagaaag attgcgacaa tcaattttca
    11701 ttatttttcc ttgatattag ctttgaaaaa taatattatt ttattacttg ttttgtgttt
    11761 aaaaatttta aataatatag aaaaaattta aaagctcaaa aatgagcttt ttttaaaatc
    11821 tttttttatc cacatcttca agaattgccg cagcaatttg attgacttca tttgttatat
    11881 tattggtaac atttgcaact tcgacatttt ccttagttac agtttcaagt tgtgctatag
    11941 catcgttaat ctgtgtgatt cctgctgttt gttcttttac agattctgct acttcattta
    12001 cgctttgaac aagtatatta atatttgcct cgatttcaga taaggatttt cctgttcttt
    12061 ccgcaagctg tcttacctca tctgcaacaa ctgcaaaacc acgcccatgt tctccagcac
    12121 gtgcagcttc aatagctgca tttaaagcaa gaagattcgt ttgctcagcg atatctttaa
    12181 tcacattgac aatatttttt atatcatcag cttgcgaagc aacctcaact gtttttccac
    12241 ttacattttg catagaagaa ttaatctcct ctacagctgc agccgattgt tctaaagaac
    12301 tcgcttgtgc attagagcca tcagcaagtt tttgcataga attttttaac tcttctgact
    12361 gattggctaa atctttagca aaatttgaag aagctacaag catcttttta atttctttac
    12421 ctaaaatatt agttgtaatc tcaacttcgc ctttagcatc aagtacctct gtgctaaaat
    12481 caagcgcttt ataactatca aaaactctat taatttcatt catattagaa ccaattttac
    12541 tttgcaaaac atcaagcatt ctattaagaa catttttaag ttctactaat tgagggttta
    12601 taggattttt agtaattctt gcagttaaat tacctttttc gatttctcta gcagtttgca
    12661 ccgattcatc tacagcattt tgatcttgtt ctaaagatat ttgaatcttt tcaatatttt
    12721 catttatgat tctgcccatt gctcctagct catcattggc acgaatttca atagccttag
    12781 gttcaatttt ttcatggttt aaaaaacgga aaaatgattc taaagaacta agaatcacag
    12841 gcaatctaga tgcgacaatt tttcttacgc aataataaac cactcctaaa acaacaaaaa
    12901 taaaaataaa agatgcacca ataataatta attgtaattt tttcaaaggt tcaaaaactg
    12961 aatatttagg ggcagttacc aaaaccgtcc aagaactatc ttgcacttta aaactattaa
    13021 tcgcagcata agaatcatca ccgtcaaaag ctatatagtt aaaaactcca ttttttcctt
    13081 cactcatagc cttataagtc tcttgtgcac ctttattagg attgacatct tttaaatttt
    13141 ttaaaaccaa atttttatta ggatgaattg caacaagacc atctgaattc aaaagaattc
    13201 ttaattctcc attatatttt tgactcttag ggtctaaaag ataagtagca atagccgaaa
    13261 aatccaaagt cataccgata acacctacaa cttgattttt tcgatcaaaa ataggcatag
    13321 caacatttac agcatcaaaa tcttgacctt ctaaattcat cttgatagga cggcctatat
    13381 atactttatt ttccccatat tttgcttttt ttaatatatc ttgcacaact tgcagattag
    13441 ctatttcatc actagcttgt attgctttta ttccgccttt attatccttt tcttcatcag
    13501 cgtaaagcat gacaaatttt ccactttgag tattgaaaaa tttactctct tctttaaagt
    13561 attctggcgg atcgataaga tacaaataag taaaattaga ataagcacta ttatcaaaag
    13621 tattggttat aatatttgtt atattatcta tatctaaatc ttctttagag gttgatctaa
    13681 acatttctgt taaagtacct gaaatacttt tatttaaagc gatcatttcc ccaaaaattc
    13741 cttgagtttg ggtagcatat tctttcgtga tagaagcaag aatatcttct gtatttttag
    13801 taatattttg acttacttgt tttgtgatta atgaaattaa aataacaagt ccaataacaa
    13861 caacagttgc cacagaaaaa ataagtttta aacctatatt taaagattta aacatcttat
    13921 aactcctaa
//
LOCUS       DARBAC010000039        13821 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.039, whole genome shotgun sequence.
ACCESSION   DARBAC010000039 DARBAC010000000
VERSION     DARBAC010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13821
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.039"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..328
                     /gene="metG"
                     /locus_tag="SB799_000872"
     CDS             <1..328
                     /gene="metG"
                     /locus_tag="SB799_000872"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine--tRNA ligase subunit beta"
                     /protein_id="HEG0868123.1"
                     /translation="PKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQ
                     VLSGIAKHYKASDLIGKQVCIISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLVQ
                     NGSLVG"
     gene            332..1273
                     /locus_tag="SB799_000873"
     CDS             332..1273
                     /locus_tag="SB799_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868124.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKAGFAFFNNDK
                     KEITQAVKKGAYAIITENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKSQKIIFDFNKIDDFK
                     IYFIDDKFEITPFGSSSQAFIVSNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQ
                     LSDLRKLKNFKYCLILENYDIFEQEFENKENQTPSLF"
     gene            complement(1265..1717)
                     /locus_tag="SB799_000874"
     CDS             complement(1265..1717)
                     /locus_tag="SB799_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEG0868125.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLVK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMKIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            1772..4318
                     /locus_tag="SB799_000875"
     CDS             1772..4318
                     /locus_tag="SB799_000875"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEG0868126.1"
                     /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTKELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLNSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAREVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQAGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQD
                     SGALPIICDVINLEMGDEFEIHPYEGKIIKNGSTIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCAKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     MTLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEAGYENK
                     ATLVRRAEKMREWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSE
                     ILADNKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSDEHKANIYRYLNFNEIENFKLEN"
     gene            4378..5616
                     /locus_tag="SB799_000876"
     CDS             4378..5616
                     /locus_tag="SB799_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEG0868127.1"
                     /translation="MKLLFTSFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPITYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     DLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALENYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANLNAVDDLGFNALDFALAAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            5613..6362
                     /locus_tag="SB799_000877"
     CDS             5613..6362
                     /locus_tag="SB799_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEG0868128.1"
                     /translation="MKTAFITGASSGFGRACVEAFIQKGYKVIALARRKERLEELKNS
                     HKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKVVIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            6359..8092
                     /locus_tag="SB799_000878"
     CDS             6359..8092
                     /locus_tag="SB799_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEG0868129.1"
                     /translation="MNKFLVLLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFTGVLSGTFLLSLSANIFKAQHLAFVNFYNTAVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISDISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGTLDTAELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASANPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            8089..9162
                     /gene="trmA"
                     /locus_tag="SB799_000879"
     CDS             8089..9162
                     /gene="trmA"
                     /locus_tag="SB799_000879"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEG0868130.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTR
                     AELSFYHENDTLFYAMFDPKSKKKYIIEYLDFADEKICAFMPKLLEYLRQDNKLKEKL
                     FGVEFLTTKQELSITLLYHKNIEDIKSNLENLSNILHINLIARSKGKKLIFKTENLRQ
                     TLNIQDRKIFYEFNNDCFIQPNTTINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKVLATEISKSNINFALKNCKLNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRVE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(9149..9565)
                     /locus_tag="SB799_000880"
     CDS             complement(9149..9565)
                     /locus_tag="SB799_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HEG0868131.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGAFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            9684..10097
                     /locus_tag="SB799_000881"
     CDS             9684..10097
                     /locus_tag="SB799_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEG0868132.1"
                     /translation="MNEKETISYIINASKNIAIFALSPDKTKASYRVAEFLQRKNYKI
                     FPIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVEKNIKNLWLQLG
                     ISNETAKEECKKLDINFIQNRCIMLEYPHFKTKEK"
     gene            10097..11308
                     /locus_tag="SB799_000882"
     CDS             10097..11308
                     /locus_tag="SB799_000882"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEG0868133.1"
                     /translation="MLELNKIYKAKQQISEFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSTEQKQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPEST
                     PLLKVSATKALGAEVILKGDNFDEAYAFATSYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEISDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(11305..12030)
                     /gene="truA"
                     /locus_tag="SB799_000883"
     CDS             complement(11305..12030)
                     /gene="truA"
                     /locus_tag="SB799_000883"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEG0868134.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGVLSHLGIVSPL
                     LMASRTDKGVHASYAVASVECGDHFVNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVR
                     FDVKSREYRYIFSHSSYSPFMASYVHFYPKFDLDKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(12027..13052)
                     /locus_tag="SB799_000884"
     CDS             complement(12027..13052)
                     /locus_tag="SB799_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEG0868135.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFK
                     KMILSRY"
     gene            complement(13052..13795)
                     /locus_tag="SB799_000885"
     CDS             complement(13052..13795)
                     /locus_tag="SB799_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002919655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEG0868136.1"
                     /translation="MGSFCTSLASRIIEKKPFFISRSFCFSCDTKLKYYEIIPIFSYI
                     FLKAKCQTCKCHLPISLLINEILGIILLILAYSLSQNFYDFLFLSLFLFNLFLLSLID
                     IKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSGGFLLNAFSFGGFVFLLKSL
                     VFFLMNFRKKDEILENLGDADIIIMSCIGGILGFEYGFLVLLIASILTLPFFIFFKIK
                     AIKEQELAMIPFLNIAFVAVLFYKNLGLF"
BASE COUNT         5122 a         2084 c         2171 g         4444 t
ORIGIN      
        1 tcctaaaata aaaatcgatg attttgcaaa aattgaaatc aaagtcgcta aggtgcttga
       61 ttgtcaaaat atagaaggga gtgaaaaact tttgaaattt caactcgaac ttgacgataa
      121 agaaatccgt caagtactct caggcatagc aaaacactat aaagccagtg atttaatcgg
      181 taaacaagtt tgcattataa gcaatcttaa aaaagctaaa atttttggac atgaaagcga
      241 tggtatgata ctttctgcaa aaagcggaga taaacttgtt ttaatcaccc ctgaacaact
      301 tgtacaaaac ggttctttag taggctaaaa tatgcaaatt agcaatttag gtgaactttt
      361 aaacgcaacg ctcattcatg aaggtagcgt tttaagtgtg gaaggttttg ccataaattt
      421 aaacgaactt aaagcaggct ttgccttctt taataacgat aaaaaagaaa ttacccaagc
      481 tgtaaaaaaa ggcgcttatg ctataattac agaaaatgac attactattg aagataaaga
      541 cattttttac tttagagtag aaaatctaga acaagctctt gtaagatttt tacgcttttt
      601 ttgtgaagat aaagaatgtg aatttttact ttttaaatct tacgaactaa gtctttgcaa
      661 ggctttttat tttaacattt taaaaggaaa tatttttgct gattttgaaa aactaatcaa
      721 agcaaaaaag ggtgaaattt tttgttactg tgaagaaaat tacttaaata aactttgcgc
      781 ctattctcat agtctaaaag atgctaattt taccttatta tcgcgatcta gcttcttttt
      841 tacaactttg atttgtgaaa atttatattt taaaaatctt aatttgcctt ttttttacgc
      901 aaatagtttt gcaaaaatta tttctttttt aaaagaaaaa agtcaaaaaa taatatttga
      961 ttttaataag attgatgatt ttaaaattta ttttattgat gataaatttg aaatcactcc
     1021 ttttggttca agctctcaag cgtttattgt aagcaacaac caaaatacct ttgaattctg
     1081 gaaagaaaaa tttaaaaaca taaaagactt taaaattgct tctaaaaatt ctttattttg
     1141 tgatttttcc tataatcagc tttcagattt aagaaaatta aaaaatttta aatattgttt
     1201 aattcttgaa aattatgata tttttgaaca agaatttgaa aacaaagaaa atcaaacccc
     1261 aagcttattt taaattcact ccttcatttt caagcaaaaa tctttttatt tcaagccctc
     1321 cattatatcc tcctatgcca ttacttgcaa taactctatg acaaggtata aaaataggaa
     1381 tctgattttt agaatttgca tttccgacag ctctaaaagc ttttggatga ttaatttttt
     1441 ctgctatatc tttataagta gctattttac cataaggaat tttcattaaa gccttataaa
     1501 cctttgattc aaaatctgta ccttgtatca aaacaggaat gctaaatttt ctaagcttat
     1561 gagtaaaata taaatcaagt tcatatttta ctaagtcaag caaactacaa tttttttctg
     1621 atcttttatt atcacaaaaa tcgactctag ttaaaaattt tccatcacta tgtaaagata
     1681 ggtaacataa aggcatttta taataaactt taaacatttt ttatccttca aagagctaca
     1741 attataataa aaaatattta aggagtagaa aatgtctttt atgcaagaat acaataaact
     1801 tgttgaagaa agagccgctt tgggtatacc accccttcct ttaaatgcaa atcaaactaa
     1861 agaactttgt aaactacttg aaaatgaaaa taatgaagag cttgcaaatc ttttagaaaa
     1921 tagagtaaat cctggtgttg atgatgcagc tttagtaaaa tgtgaatttt taaattctat
     1981 acttaaaggc aaaatcagtg ctccaaatat agacaaaaaa agagccttaa gaatgcttgg
     2041 aactatgtta ggcggatata atgttaaagt tttaatcgat gctttaaaag atgaaaacat
     2101 agccaaagat gctgcagaag tgttgaaaaa tattattttt gttcatgata attttcatac
     2161 catagctgaa cttagcaaaa acaatccaca cgctagggaa gttttacaaa gctgggcaaa
     2221 tgcggactgg tttaacaaaa aagaaaaatt acctcaagtg attaaatgta tagttttcaa
     2281 agtagcaggg gaaacaaata ccgatgatct aagccctgca ggagatgctt ttacaagaag
     2341 cgatattcct ttgcatgcaa atgccatgct aaaggtaaga caagcaggat ccttagaaaa
     2401 aatcaaagag cttaaaaaaa gcggtcgcga agtagtttat gtaggtgatg ttgtaggaac
     2461 aggttcaagt agaaaatcag caataaattc tatacaatgg cacttaggaa aagaaataga
     2521 aggtgtacca aacaagcaca gcggtggtat agtaatgggt tcaaccatag caccgatttt
     2581 ctttaacact gctcaagata gtggggcttt acctatcatc tgtgatgtaa taaacttaga
     2641 aatgggcgat gagtttgaaa ttcatcctta tgagggaaaa atcataaaaa atggctctac
     2701 aattgcagaa tttacactca gtccaaacac tctcttagat gaagttagag caggaggaag
     2761 aatcccactt atcataggtc gtgggctttg tgctaaggct agagaatttt taggtatgga
     2821 aagtgaaaat atctttacca aacctgaaca acctaaatct tcaagcggtg gttatacctt
     2881 ggctcaaaaa atgctaggtc gtgcctgtgg agttgaaggt gtgcgtccag gtatgtatat
     2941 agaacctatg actttaactg taggctctca agatactaca ggtcctatga ctagagatga
     3001 aattaaagag cttgcaagcc taggttttaa tgcagacttt gtgatgcaaa gcttttgcca
     3061 tacagctgct tatccaaaag taagcgattc aaatttacat aaaaccttgc ccaatttcat
     3121 gacaagtcgt ggtggggtga gtttaaaacc aggtgatggg gttattcact cttggcttaa
     3181 tcgttttgta ttgccagata ccgtaggaac gggcggggat tctcacacac gctttcctat
     3241 aggaatttct ttccctgcag gaagcggact tgtagctttt gctgcggtta ctggctctat
     3301 gcctttaaat gtacccgaaa gtgttttagt acgttttagc ggagaattgc aagctggagt
     3361 taccttaaga gatttggtta atgctatacc ttattatgca atcaaacaag gacaacttac
     3421 tgttgaaaag aaaaataaga aaaatatttt tgcaggaaaa attttagaaa tagaaggctt
     3481 gccaaactta aaagtcgaac aagcttttga actcagcgat gcaagcgctg aaagatctgc
     3541 cgctgcttgt agtgtggatt taagcataga aagtgtaagc gaatatatca aatccaatat
     3601 ttctttaatt gaagctatga tagaagcagg atatgagaat aaagctaccc ttgttagaag
     3661 ggctgaaaaa atgagagaat ggcttaaaaa ccctactctt ttaagagcag ataaagatgc
     3721 aaaatacgct tatattatag atattaatct taatgacatt aaagagccaa tcctagcttg
     3781 tccaaatgac cctgatgatg tggcaacctt aagcgaaatt ttagccgata ataagcgtcc
     3841 aaaaaatata gatgaagttt ttgtaggttc ttgtatgaca aacataggac attatagagc
     3901 tttgggagaa attttaaaag ataaaggcat acttaaaacc agactttggg tagtgcctcc
     3961 aacaaaaatg gataaagcac aacttactaa tgaaggttat tacagcatct ttggtgcagc
     4021 aggtgctaga atagaagttc ctggttgttc tttgtgtatg ggtaatcaag ctagagtaaa
     4081 tgatggagct gtagttttct caacttctac aagaaatttt gacaaccgta tgggaatggg
     4141 tgctaaagta tatttaggca gtgcagaact tgcagcagtt tgtgcgattt tgggtaaaat
     4201 tccaagcaag gaagaatact tacaaattgt tagcgaaaaa ctaagtgatg agcataaggc
     4261 aaatatctat agatatttaa attttaatga gattgaaaat ttcaaacttg aaaattaatt
     4321 caaatttaat acttatttgg attaaataac aaaattaaaa ttttcaaagg aaaaatattg
     4381 aagttattat tcacttcctt ttgttgtttt gcaagtttaa tggctagcga tgccattaac
     4441 tgcgacaaca ttaaaaataa taaaacattg ctaaatgaaa gttcaaattt agattattta
     4501 aatatagctt caagctgtaa agaatcttta aaaaatcaag attttacaaa aaaactctat
     4561 gcgatttcca atgaaattcg cggaagcaat agctcttgta atggtgtggc ttatttgccc
     4621 aaattacaac aatttgattt tttattatta aaaatagcca tcgaccccat cacttatcaa
     4681 aaaactttag atacacctga gaatttagaa aaaaaatatg atattttaaa atcttacttt
     4741 agatattggg catatcaaag tataggaaat tttagacttt acaaagcttt ttggcaagaa
     4801 tacaataacg ctatagaacc tttagaaaag tattttgaaa gtaattttaa ttttgacaaa
     4861 ggtagcaata tttactatac tagcaatgcc ttaaacgaat ttttaaattg ggctgttgga
     4921 gaaacaaaaa tttacaaaga cattagtcct ttagcaaaaa tcatgtcaaa taaaaattat
     4981 tcggtatctt atatacaaga ttttattttt tcaaataatc caagtcaaga tgatcttact
     5041 atagccttac aagcagcgct tctaaatcaa agagaaaaag aaattttaga acttttgatt
     5101 cgttttggcg ctaggattga cgaaggttat gaaagtgcta ttttttacgc attggaaaat
     5161 tatgaaaata caaatttttt aatccaaaat ggagcgaatg ttaatcaagc caatgccttt
     5221 ggtaaaactc cgctttttta tgccatagag tttaatcgtc ttgatatcat aaaactactt
     5281 cttgataatg gagcaaatgt taatcaaaaa tatattaata acaatgaaaa attagcatta
     5341 agtgcgaaca taggttcaaa tacgccttat tttattacat tttgtgctct agagcacact
     5401 tcaaaaaatg ttttaatgca tgctgcagct tatggaaatg ttgaaatttt aaaacttctt
     5461 atctcaaaag gagcaaatct taacgctgtt gatgatcttg gttttaatgc acttgacttt
     5521 gcgctagcag caggcaaaaa agaaaatgct gattatctaa aaagcttggg tttaaaagca
     5581 aatgaaaatc tattttacgg aggtagttta gaatgaaaac cgcatttatt acaggagcta
     5641 gttcaggttt tggtagagct tgcgttgaag cttttataca aaaaggctac aaagtaatcg
     5701 cccttgctag acgcaaagag cgtctagaag agttaaaaaa ttctcacaaa gataagattt
     5761 acacgctttg catagatgta agaaatcaaa aagaaatctt tgaggctatt gaaaatttac
     5821 ccaaagaatt tcaagaaatt gatgtgcttt ttaataatgc aggcttagct ttaggggtag
     5881 atgaatttga taaattaaac cttgaagata ttaacactat ggtagataca aacatcaaag
     5941 gatttttata tgttgcaaaa gttgttattc ctatacttcg taaacaaaaa aatgcttata
     6001 tttttaactt aggttcggtt gcaggacgca atccttattt tggaggcaat gtgtattgtg
     6061 gaaccaaagc ctttgtagga caattttcat tggccttaag aaatgatctt agaggaagca
     6121 atatcaaagt aacaaacatt gctccaggac tttgcaaaac tgaatttagt gaagtgcgtt
     6181 ttaaaggaga tatccaaaaa gctgatgcag tgtatgaaaa tacgcaattt atcagtgcta
     6241 atgatattgc caaagtggta atgtctatta ttaacctacc aagccatatt aatgttaatg
     6301 aaatcgagct tatgccggta acacaaactt ggaatggatt ttatatagaa agagatgaat
     6361 gaataaattt ttagttttat tgtttttacc tttagttgca tttgcaaact cctcagaagc
     6421 agctgcaaat gctaatttat ttggagcttt tacgcttata ccgcctttag ttgctattgc
     6481 tttagccttt atcacaaaag atgttatttt gtcactcttt actggagttt taagcggaac
     6541 ttttctactt agcctttctg caaatatttt taaagcacaa catttagctt ttgtaaattt
     6601 ttataatacc gcagtagaat ctttttcaaa gattatttct tatatcttag gttcaacttc
     6661 agatccagta aatgcaggaa tcattttaca aattctttgt ataggtggtc ttgtggcact
     6721 tatcacaaaa atgggtggtg caaaagctgt agcattaaaa tttgccaaaa gagccaaatc
     6781 agctgtatca gctcaagtta acacttggtt tttagggctt ttaatatttt ttgatgatta
     6841 tgctaattta ctgatcgtag gtccaattat gcgtcctttg gcggataaat ttaaaatttc
     6901 tcgtgaaaaa tttgccttta ttatcgactc taccgcagct cctgtggcag gaatagctgt
     6961 aatttctact tggataggct tagaagtttc tttaattaaa accgcttatg aacacatagg
     7021 cattagcgat attagtgctt ttggaatttt tgtcgaaacc ataccttatc gtttttataa
     7081 tatcttcatg cttttttttg tagtcatgac tgcaatcatg ggacgtgagt ttggttctat
     7141 gtacaaggct gaagtgcgtg caagaaccac aggacaaatt gcacctctac ctaaatcagg
     7201 cacactagat actgctgaat tagaggatca gtttttagcg ccaaaagaag gtattaaaat
     7261 tcgtgctttt gatgctattg ttcctatttt tactttaatc attttagcta tattaggatt
     7321 ttattttaat ggacttagca ctttagaagg cgaagaactt gcaaaagcaa gtgccaatcc
     7381 tttgtctttt gaaactttta gggctgcttt tggaaatgct gattcttctg tggtgttatt
     7441 ccaagctgct ttgtttgctg ctattgtagc gatttttatc ggggtgcgtc gtaaaatttt
     7501 caatcttaaa gaagcggtag aaacttggat atatggctgg aaaaccatga tttttaccat
     7561 agtattgctt ttatttgctt ggtcgctttc aagtatagta aaagatctag gaacttcttt
     7621 atttatcact agtttgcttg cagataaatt gcctgagttt attttgcctg ctactatttt
     7681 tgcttttgct tcagccattt cttttgccat aggaacaagc tatggaacta tggggatttt
     7741 aatgcctttg gctgtgcctt tagctcatga aatcgccaaa atcaatggta tggatgcaaa
     7801 tgctatgcat cattatatgg ttattaatat aagctgcgtt ttaacaggtg cgatttttgg
     7861 aaaccattgc tcaccaattt cagataatgt aatcctttca tctatgagcg caaaatgcga
     7921 tcatatggag catgtaagaa cacaaattcc ttatgcttta tttatctgtg gtatttcttt
     7981 aatcgctgga tatattcctg tatctttagg acttagcgtt tggtttgtct tgcctttaaa
     8041 tttcatactt attgcgcttt tactaagact catcggaaag aaagttccat gagtcttgaa
     8101 aattttggaa attttctcac tttagatgaa aaacactctt tcataaaaaa atattttaaa
     8161 gaattttata caaaggattt taaacttttt gcctcaaaag ataaacatta tcgtacaaga
     8221 gctgaacttt cattttatca tgaaaatgat acgctttttt atgcaatgtt tgatccaaaa
     8281 agcaaaaaaa agtacattat agaatattta gattttgctg atgaaaaaat ttgtgctttt
     8341 atgccaaaac ttctagaata cttgcgtcaa gataataaat taaaagaaaa actttttggt
     8401 gtagaatttt taaccacaaa gcaagaactt agcataacct tactctatca taaaaatata
     8461 gaagatataa agtcaaattt agaaaattta agcaatattc ttcatatcaa cctcatagca
     8521 agaagtaaag gcaaaaaact tatttttaaa acagaaaatc taagacaaac tttaaatatt
     8581 caagatagaa aaatatttta tgaatttaac aacgattgtt ttattcagcc taacactact
     8641 ataaatgaaa aaatgattac ttgggtgtgt gaaattttaa atactcaaaa aagaatggat
     8701 ttacttgagc tttactgtgg atatggaaat tttactttag ctttagcacc attctttttt
     8761 aaagttttag ccactgaaat ttcaaaaagt aatattaatt ttgctttaaa aaattgcaaa
     8821 cttaataata caacaaatat ccactttgca agactttcaa gcgaagaatt aagtcttgct
     8881 atcaaaaaag aaagagaatt ttttcgttta aaagatattc gattggatga ttttaatttc
     8941 tctcatgttt tagttgatcc accccgtgca ggacttgata aaagcgtaat tgacttaata
     9001 aaaaaatatg aaaatattat ttatatttct tgtaatccta tcactttaaa agaaaattta
     9061 aaagaattaa gcctaacaca tagagtggaa gagtttgctc tttttgatca atttgtcaat
     9121 actccacatc ttgaatgcgg agtatttctt agcaaggtat aaaaaaataa ttcattaatt
     9181 tagccagtat tactatcgcg atacaaagca caaatacaaa agggtggata aaagcaccga
     9241 gtggattttt cttctttaat ataaaatgac aaaataaaga aaaaacaact aaagataaaa
     9301 ttccaaaagc caaaataatt tttacagcaa aaagtaaatt taaaggttta aaatgaaaac
     9361 ctgccaaagc acctccgctt aaaaaaagca aaagaaccac aaaaggcatt attttaaccc
     9421 cagtagcact aaaaagactt ttgtcaaaat taggattttt ctttttaact acgcccaaaa
     9481 caaatacatc aacaaacaaa taacctataa acaaaatagc acaaagaaga tggattgtta
     9541 aagtatatgg ataaaattct tccatttttc cctccttatt aaacttcgga atttgctata
     9601 ttataacact tttttcattt tttgaattca ctttagttaa ttttttaatc atttaagata
     9661 aaataccaaa acaaaggtta acaatgaatg aaaaagaaac tatctcttat attataaatg
     9721 caagtaaaaa tattgccata tttgccttaa gtccagataa aacaaaagct tcttataggg
     9781 tagcagaatt tttacaaaga aaaaattata aaatttttcc tatttatcct aaagaagagt
     9841 ttattttaaa tgaaaaagtt tatagaaatt tagatcaaat agaagaaaaa atcgatacac
     9901 ttatactttt tagaaaaggc gaagtggcac tagaaattct tcctaagctt gttgaaaaaa
     9961 atattaaaaa cctatggctt caacttggta ttagtaatga aacagccaaa gaagaatgta
    10021 aaaaattaga tataaatttt atacaaaatc gttgcattat gctagaatat ccgcatttta
    10081 aaacaaagga aaaatagtgt tagagcttaa taaaatttac aaagcaaaac aacaaatttc
    10141 agagtttgta aacaaaactc ctttcatata ctcttctttt ttaagtgata tttgtcaaag
    10201 tgaaatttat cttaaaaatg aaaatttaca aattacaggt gcttataaaa ttcgtggagc
    10261 ttataataaa atagccaatc ttagcactga acaaaaacaa catggagtca ttgccgcaag
    10321 tgcgggaaac catgctcaag gcgtggccat tagtgcaaaa aaatttggca ttaaggcagt
    10381 tattgtaatg ccagaatcca ctccgctctt aaaagtttct gctacaaaag ccttaggagc
    10441 agaggtgata ctcaaagggg ataattttga tgaagcctat gcctttgcaa cctcttatgc
    10501 taaagaaaat aatcttagct ttattcatcc ttttgaagat gaatttgtaa tggcaggaca
    10561 aggaactttg atgcttgaaa tgcttgatga aataagcgat cttgatatga ttatcgcacc
    10621 tgttggaggt ggaggactta taagtggtat cgcaagtgca gctaaacaaa tcaatccaaa
    10681 cattaaaatc atcggcgttg gagccaaagg agctcctgca atgtatgaaa gttttcatgc
    10741 taaaaaaatc aaaaatgcaa aaagcgtacg cactatagcc gatggtattg ctgtgcgtga
    10801 tgcaaatcct attaatttta atattatttt agaatgcgta gatgatttta tccaagttga
    10861 tgatgaagaa atcgctaatg cggtattgtt tttacttgaa aaacataaaa tcatagttga
    10921 aggcgcagga gctgcgagtg tagctgccct gcttcatcaa aaaataaata cacaaaatca
    10981 taaaaaaatt ggcgtagttt taagcggagg taatatcgat gcacaaatgc taaatatcat
    11041 catagaaaaa ggtttattta aatcctatag aaaaatgcaa attcatgtta ctttagtaga
    11101 taaacctggg gcattattac accttacaga cagcttaaaa atagccaatg caaatatagt
    11161 aaaaatcgac tatgatagat tttccaccaa gcttgattat ggcgatgcga tgatttcaat
    11221 taccctagaa accaaaggta aagaacatca agaagaaata agaaaaattt taacccaaaa
    11281 ggcctttaat ttctatgaaa gtttttaata acatatacgg cttaaataaa gcccatttgg
    11341 cggtgctaaa aagtgattgt attgcttttt agcttcaatc tgttctttga gttctttttc
    11401 actcattttt ccttctaaaa cctttaaaac acttgctacg cttaatctaa tttgccctct
    11461 taaaaaacca ttagctttaa aatgaaaaat gctaaaatct ttataagcat aagctctagc
    11521 aataaaaatt tctcttaaag tcgttttatt atcccctcca cttttgcaaa aaaactttaa
    11581 atcctttttt cccacaaaaa aacccaaaag ctcattagcc ttatctaagt caaatttagg
    11641 ataaaaatgt acataagaag ccataaaagg actataagaa gagtgagaaa atatatagcg
    11701 gtattctcta ctttttacat caaatcttac ttcaaaatca tcttttactt tttcaatttt
    11761 tttgatatgg ataaaaggat gggaaaattt attaagctgt ttttgaagat attctaaatt
    11821 tacaaaatga tctccacatt ctacactagc tacagcatag cttgcatgca ctcctttatc
    11881 tgtacgagaa gccatcaaaa gaggtgaaac aatacccaaa tgcgataaga ccccacttaa
    11941 agcatcttga acaccttttt tatgaggctg agtagcagaa cctaaaaaag cagagccatc
    12001 ataagaaaat ataattttta ttttcatcaa taacgactca aaatcatttt cttaaaacaa
    12061 taagccgaaa caaataaact taaagaaaaa attccaaggc aagccaaaat tggaggttga
    12121 gaaaaagaac ttaaaagtcc aaaatatata gcaatcactc caaacatacc taaatacaca
    12181 tagccttttt cataacgata agtaaccaaa ccaaaacaaa gcgcaaaaag cgtactagca
    12241 agtggaaaca aggctatagt tgtataaatc acaaattctc ttgctctttg tggattttcg
    12301 tttaaatcat tccagtattc ataaaatttc tttgtttgaa gattgtctgt attaaactga
    12361 gtatttacta ctaaagtgtc aaattctcca ctaaaaatac tttgaccttg ctcaaaatta
    12421 tacattttgc cttgatttaa gctaaaagca aagctatcat cttttctttg cacatgcgct
    12481 tctttggcta tgataagttg ttctttatca tctgctttat gtttagggcg atacataatt
    12541 atgttttcat acttatcact atcttgtttt tctataaaaa tcatccagtc taaaaatttt
    12601 tgcccaaatt ctcctgtttt gtagttaaat ttcacttgag tgcttttata gtttacaaag
    12661 ttatcctgaa gttcaaatac tataggtatc attaccaaag ccacaacaag cataaaagca
    12721 ctaatcaagc ttgcaatttt aaggaaaaat tttgccaaaa tcattggtga aaatcccaaa
    12781 gtaaaaagca ctatgctttc attttcctta gaaagcctaa acaaagccaa agttaaagaa
    12841 ataaaaaaag atataggcaa ggtaaaaatt aaaattctag gcaacataaa cccataaagc
    12901 tttaaaagat ccaaaaaact aatctctatg cttgaagtaa gttttgcaag ttgaataaaa
    12961 aacaccatag atacaatagc aaaaagtacg aaaaatatag acaaattcgt acttaaaaat
    13021 tgatttaaaa catatcttaa actaagcttc attagaataa tcctaagttt ttataaaata
    13081 aaactgccac aaaagcgata tttaaaaagg gtatcatagc aagttcttgc tcttttattg
    13141 ctttaatttt aaaaaaaata aaaaaaggca aagttaaaat agaagctata agtaatacta
    13201 aaaatccata ctcaaaacct aaaattccac ctatacaaga cataatgata atatcagcat
    13261 cacccaaatt ttctaaaatt tcatcttttt ttcggaaatt cattagaaaa aaaaccaaac
    13321 tttttaataa aaaaacaaat cctccaaaac taaaagcatt tagcaaaaaa cctccgctaa
    13381 actctttaaa aatcaaaaaa tgtaaaattt cactttccct aaaggcgtaa aaaaaagcaa
    13441 ataaaaaagc gctccaaagt aaaatttgtg gtacggcttt gagtttaata tcaattaaag
    13501 aaagcaagaa aagattaaat aaaaatagag ataaaaataa aaaatcataa aaattttgac
    13561 ttaaagaata agccaaaata agcaaaatta tgcctaaaat ttcattgatt aacaaagaaa
    13621 taggcaaatg acatttgcaa gtttgacatt ttgcttttaa aaaaatataa gaaaaaatag
    13681 gaataatttc atagtatttt aattttgtat cgcaagaaaa acaaaaagag cgcgagataa
    13741 aaaagggctt tttttcaatt atcctacttg ccaaacttgt gcaaaaagaa cccaaacaag
    13801 cccctagaat tattatgaaa a
//
LOCUS       DARBAC010000040        13662 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.040, whole genome shotgun sequence.
ACCESSION   DARBAC010000040 DARBAC010000000
VERSION     DARBAC010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13662
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.040"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(180..265)
                     /locus_tag="SB799_000886"
     tRNA            complement(180..265)
                     /locus_tag="SB799_000886"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(229..231),aa:Leu,seq:gag)
     gene            complement(300..638)
                     /locus_tag="SB799_000887"
     CDS             complement(300..638)
                     /locus_tag="SB799_000887"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEG0868137.1"
                     /translation="MKKVLFLLLACAAVAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            872..2206
                     /locus_tag="SB799_000888"
     CDS             872..2206
                     /locus_tag="SB799_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0868138.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFTSEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAISKDGFMMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFAFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSISSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFEPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            2219..3559
                     /locus_tag="SB799_000889"
     CDS             2219..3559
                     /locus_tag="SB799_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEG0868139.1"
                     /translation="MRTYFSKIGFVLAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNLITTNLTSSVFFFILSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFSHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGAGIVFVSLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGA
                     IVCSIFVGFFMNKKQIYKIFSKFISRKIFLIWLFFIRFISPIAIILVMCYQIFV"
     gene            3592..5391
                     /locus_tag="SB799_000890"
     CDS             3592..5391
                     /locus_tag="SB799_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HEG0868140.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFAMMDRFRAIVGKDANLQTLARGVNTVTLDTGSSELID
                     LHAKLFAKHGTTTIRNFDALNDVNNLKFSGECIVKYGLKHEITITLMDLPSNCKGAHD
                     VPFYEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDTHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKDKDYDLGGFEEEKI
                     LKYEEVLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKEGIETSEENIFVAAACK
                     EKGIAFLKGEAKVNVRKLASMPKPMSVDENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIISELCIKIGDTVNEGEVLAIYKN"
     gene            5404..6978
                     /gene="pckA"
                     /locus_tag="SB799_000891"
     CDS             5404..6978
                     /gene="pckA"
                     /locus_tag="SB799_000891"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEG0868141.1"
                     /translation="MKKFDNLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKINQPITKELFDKLLTKAKQELSGKKIYVQ
                     DAFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     HEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     IAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYTETRDKLAHMFVQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            6988..8370
                     /gene="argH"
                     /locus_tag="SB799_000892"
     CDS             6988..8370
                     /gene="argH"
                     /locus_tag="SB799_000892"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEG0868142.1"
                     /translation="MKNEMWSGRFSGASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIIKGLEQVKSEIEQGKFVFDIKDEDIHMAIEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELLKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYATNRELSAEIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSV
                     KTAKDSLIILNAMLKEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPVFDEKAMELLNFEFSLNSKQSEGSSSIASVEKQI
                     QILEGFIQNL"
     gene            complement(8392..9495)
                     /gene="ychF"
                     /locus_tag="SB799_000893"
     CDS             complement(8392..9495)
                     /gene="ychF"
                     /locus_tag="SB799_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEG0868143.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPEKIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVNENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(9492..10943)
                     /locus_tag="SB799_000894"
     CDS             complement(9492..10943)
                     /locus_tag="SB799_000894"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEG0868144.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTRTLERFIISSEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTSLKMAEDAQNLAKENKNITCKIYDEKFLAKEKMNAFLAVNRA
                     SVHPPRLIHLSYKATNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(10940..11536)
                     /locus_tag="SB799_000895"
     CDS             complement(10940..11536)
                     /locus_tag="SB799_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0868145.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(11555..12103)
                     /gene="apt"
                     /locus_tag="SB799_000896"
     CDS             complement(11555..12103)
                     /gene="apt"
                     /locus_tag="SB799_000896"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEG0868146.1"
                     /translation="MIKLTQEEQKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(12100..12432)
                     /locus_tag="SB799_000897"
     CDS             complement(12100..12432)
                     /locus_tag="SB799_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868147.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(12432..12869)
                     /gene="rpiB"
                     /locus_tag="SB799_000898"
     CDS             complement(12432..12869)
                     /gene="rpiB"
                     /locus_tag="SB799_000898"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEG0868148.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKIDERSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            13035..13589
                     /locus_tag="SB799_000899"
     CDS             13035..13589
                     /locus_tag="SB799_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEG0868149.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDIKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLVKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
BASE COUNT         4409 a         1914 c         2335 g         5004 t
ORIGIN      
        1 aatttctcct aactttttaa aacaaaaaat aaaaagttag gagaaaagtt agggaaaaat
       61 ttttaaaatg gattttaacg gaaaaattta atttagattt tagatagttt taaagtccta
      121 ttttatagat attttttaag ttttatattt atgttaattt atgtagttag cagtataaat
      181 ggtgcggtta gcgagatttg aactcgcaca cgcggagcgc accaccccct caagatggcg
      241 tgtctaccaa ttccaccata accgcataga aaaaagccca aaaagggctt tgataagttt
      301 tattgtaaaa ctataaaagg atttgcgtaa agtgctatta gcgcgataac aagagcatag
      361 ataacttgtg cttcaatcat cgctaaagcg ataaacatag ttgtcattaa ttttggccca
      421 agaccagggt ttctagctgt tcctgcaatt gttgccgctg cagtattacc cataccgata
      481 gcaccaccaa gtgctgcaac gccaagacct aagcctgctg caagaactga aaatgcttta
      541 atccatacat taatagcttc ttgctctact ggagcattag tttcagctgc aaaagctact
      601 gctgcacatg ctaataataa aaaaagaact tttttcatta tcttaacctt tctataaaaa
      661 aaattttttt caatttttaa atcagttcgg cttgcgtatc cctacttaag acttaaaaat
      721 aaagccgaat tataaccaaa agtatcttta tttttattga aatttacaaa aattcacatt
      781 tttgatttaa atttgattgt tttcaataaa gcttaaaagt ttttttgctt taataatatt
      841 ttaaaataat ttttaagtta aggttgcaac attgagttct aaattttcaa aaataggttt
      901 cattttagcg gtagcaggtt cagcagtggg cttgggtaat gcttggaaat ttccaacact
      961 agtaggtcaa agtggtggat ctgcttttat cttgctttat ataattctta ctttgggtgt
     1021 aggttttgtg atatttttag ctgagcttag cataggaaaa attagtgaaa aagatccggt
     1081 taatgcctat gaaaagttag caccttcaaa taaaaaagct tggtcttatg ttggttttac
     1141 tatggtgggg gcgattttaa tagtttcttt ttataccttg gtgattggct ggatagttaa
     1201 atatgtgttt ttaagtatca ctggaaattt gcctatggat ctagaagtaa gtaaagcaca
     1261 gtttggattt tttacaagtg aggatttttt aagtcagttt atttgtttta ctttggtttt
     1321 tttatgtgtt ttttatattg tttctaaagg tgttaagaat gggattgaaa agttaaatgt
     1381 ttggatgatg ccttcattat ttattttact aatcttgatg cttgtttatg ctattagtaa
     1441 agatggtttt atgatggcgg ttaaatttct ttttgtgcct gatttttcca aaatcaacac
     1501 ttcaaatgtt cttgaagctt taggacttgc cttttttagt ctttctttgg gtgttgggac
     1561 gattattact tattctgcta gtctgcctga taaaactaat tttattacca gtactttaaa
     1621 tattattttt atcaatcttt tagttggtct attaatgggt ttggttgttt tcacttttat
     1681 ctttgaattt ggttacaatc ctaatcagca aggaccaggg cttgttttta tttccttggc
     1741 tactttattt gaaaaaattg gggtgatcgg ttgtattttt ggagcagcgt tttttatttc
     1801 tttaatcttt gctggtatta cttcagctgt ttcaatgata gagccttttg ctttttatct
     1861 tattaatact tttggtatga gccgtaaaaa agctttgatt ttaataggaa ttgttgttta
     1921 tattttagga atgttgtgta ttttatcttc tttaaaaagt actcagtttg gattttttgg
     1981 aatgagtttt tttgatttgc ttgatagtat ttcaagtaag gttattatgc ctttaggtgg
     2041 aattttggca gctatttttg tgggatttgt gatgaaaaaa gaagctttaa aaattttatt
     2101 tgaaccttat atgaggggta tattttttga actttggtat gtgtttttga gatttatttc
     2161 ccctttggct gttgttatag ttatgatagc cgctttttta aagtgagttt gaaaaataat
     2221 gagaacatat ttttcaaaaa tcggttttgt attggctgtt gctggtggag ctgttggttt
     2281 aggtaatgct tggaaattcc caactttaag cgcagaaaat ggcggttttg tttttgtgct
     2341 tttatacttg ttttttactt taaccatagg atttagtatt tttttggctg aagtggctat
     2401 gggacgttta agtaaaagtg atcttgcaaa tgcttattca aatcttgcca taaaatatgg
     2461 caatagatgg cgatatggcg gcgtttttat gttaggtggt atttttgttc tctcttttta
     2521 tctagttatt atgggatggg ttttaaaata tactgtagtt agtctttatt atcttcctaa
     2581 aaccttagat gaagcagcaa gtaattttca gaatttaatt actacaaatt tgacaagttc
     2641 tgtttttttc ttcattttat ctttttttct tactttatta atagtatcta aaggtttaat
     2701 caaagggatt gaaaaattaa acgttgttat aatgcctagc ttatttttaa tgcttgtttt
     2761 tatgttgttt tattgtatgg gatttaagca aggttttgca aatgcttttt cttatttatt
     2821 ttatcctgat ttttcacatt ttaaatttag ctctattgcc gaagctttag ggcttgcatt
     2881 ttttacctta tgcttgggaa taggttgtat agttacatat tcatcagcct tggataaaaa
     2941 aacaaatttt ataaaaagtt cagtgtatat tgttttgatt aacttattga tttcttttat
     3001 catgggactt attgttttta cttttatctt tgaatttgga gccgatccgc atactcaagg
     3061 agcaggaatt gtttttgtat ccttgatgag tttgtttaat caacttggag ctttaggcta
     3121 tatttttgca ttttgttttt tcttagcact tttttttgct ggtattactt cagctgtttc
     3181 aatgatagag cctttaactt tttatatgat taataactat caaatttctc gtgttaaagc
     3241 tctattttta ataggtttat ttgtttttgt ttttggaatt tgttgtatct tgtcattaaa
     3301 tttaaatttt ttttctatgt ttagtttttt tggcaaagat ttttttactt tattagataa
     3361 attaacttca aattttttac ttccacttgg tgctatagta tgctctatat ttgtaggttt
     3421 ttttatgaat aaaaaacaaa tttataaaat tttttctaaa tttataagta gaaaaatttt
     3481 cttaatttgg ttgtttttta ttcgttttat atcgcctata gcaataattt tggtaatgtg
     3541 ttatcaaatt tttgtataat aatgaaaaaa tatttttttt aaggaaaaat aatggctaaa
     3601 aaattcatcg atgtaatgga tacaagcttt agagatggtt ttcagtccgt ttatggggct
     3661 agggttttaa tggatgattt ttttcctgca gtagaagcag caaaagaagc aggcattaca
     3721 cattttgaat ttggcggtgg tgctagattt caaagcttgt atttttatct taatgaagat
     3781 gcttttgcca tgatggatag atttagagct attgtaggaa aagatgccaa tcttcaaact
     3841 ttagcaagag gggtcaatac cgttacttta gacactggaa gtagtgagct tattgatttg
     3901 catgcaaaac tttttgcaaa acacggtact acaacgataa gaaattttga tgcccttaat
     3961 gatgtaaata atttaaaatt tagtggtgaa tgtatagtaa aatatgggtt aaagcatgaa
     4021 attactatca ctttaatgga tttaccgtca aattgtaaag gtgcccatga tgtgcctttt
     4081 tatgaaaaaa ttttaaaaga aattttagca gcagaaattc cttttcatag tatttgtttc
     4141 aaagatgcaa gtggaacttc taatccaaat aaaatttatg aaaccattaa aatggctaga
     4201 aaaattttac ctcaagatac acacattagg cttcatacgc atgaaactgc aggagtgagt
     4261 atagcttgct atcttgcagc acttgaagca ggtgttgatg gtatcgattt ggctgcagct
     4321 cctgtaagtg gtggaacttc tcagcctgat attttaacca tgatgcatgc cttaaaagat
     4381 aaagattatg atttaggtgg atttgaagaa gaaaaaattc taaaatacga agaagtttta
     4441 aaagattgtt taaaagagta ttttttaccc cctgaagcta ctatggtaaa tccacttatt
     4501 cctttttctc ctatgccagg aggagcttta acggcaaata cacaaatgat gagggataat
     4561 aatattttag ataaatttcc acaggtcatt catgctatga gagaagttgt agaaaaaggt
     4621 ggatttggta cttcggttac tccagtttct caattttatt ttcaacaagc atttaataat
     4681 gttatgtttg ggccttggaa aaaaatcgca gaaggttatg gaaaaatggt gcttggttat
     4741 tttggaaaaa ctccagttgc acccgatgca aacattattg agcttgcttc aaaacaactt
     4801 aatttagaac ctactacaga gcttgctata aatatagctg ataaagatga gagtaaaagt
     4861 atagcttata ccaaaacctt gcttgaaaaa gagggtatag aaacgagtga agaaaatata
     4921 tttgttgcag cagcttgtaa agaaaaaggt atagcatttt taaaaggaga ggcaaaggta
     4981 aatgtacgca aattagccag tatgccaaaa cctatgagtg tagatgaaaa caaatttacc
     5041 gtagctgtaa atggtaataa atatcatgta gaagtaagtt atggttttga taaagatgtt
     5101 aatgttaaaa gtgtgaaaaa agtagaagaa aataaaaata ttatttcttc aaattcgaca
     5161 agttctgtcg atgctgaaaa tgaagtttta gcgggtattt cgggtaatgt ttttaaaatt
     5221 tatgttaacg aaggcgaaga agtaaaatca ggtcaagcta tcatggtttt agaagcaatg
     5281 aaaatggaga ttgaggttaa tgctccaaaa gatggaatta tttcagagct ttgtattaaa
     5341 ataggcgata ctgttaatga aggcgaagta ttagctattt acaagaatta aagtgaggga
     5401 aaaatgaaaa aatttgataa tttaggttta gataatataa aggaaatttt tcataattta
     5461 agttatgatg aattaaatgc tcatgaaaaa gcaaataatg aaggtttaag cacggataat
     5521 gatacttttt gtgtggatac gggaattttt acaggtagaa gtcctaaaga taaatatttt
     5581 gtaaaacaag atccatctag taaatatata gcttggggga agataaacca gcctattaca
     5641 aaagaattat ttgataaact tttaactaaa gcaaagcaag agttaagtgg aaagaaaatt
     5701 tatgttcaag atgctttttg cggtgcttct ttgcaaagtc gcaaagcagt aagatttgtt
     5761 actgaaattg catggcaagc gcattttgtt aaaaatatgt ttattcgccc aagtcaagag
     5821 gaacttgaga attttaaagc agattttatt gtttataatg cttgcaaatg tattaatgaa
     5881 gattataaac aagatggttt aaattcagag gtttttgtga tctttaatgt tgaagaaaat
     5941 atagcggtta ttggtggaac ttggtatggt ggagaaatga aaaaaggtat tttttctatg
     6001 atgaattatt ggttgccact agaaaataaa ctttctatgc attgtagtgc aaatgtcgga
     6061 gaaaaagacg atgtggcact tttctttgga cttagcggta caggaaaaac tacgctttca
     6121 accgatccaa aaagaagact cataggtgat gatgagcatg gctgggatga tgaaggtgtg
     6181 tttaattttg agggcggttg ttatgcaaaa acaatcaatc ttgatcctga gcatgagcct
     6241 gaaatttatg gcgcgattaa aagaaatgca cttttagaaa atgtagtttt aagagctgat
     6301 aagagtgttg attatgctga tgcttcaaaa acagaaaata cgagagtttc ttatcctata
     6361 gagcatattg aaaatcatga gcctagctta aaagcagggc atccaaaaaa tattatattt
     6421 ttaagtgcag atgcttttgg aattttgcct ccggtgagta aattaagcaa agaacaggct
     6481 atgtattatt ttttaagcgg ttatacagca aaagtagctg gaactgagcg tggtataaca
     6541 gagcctcaag caactttttc agcttgcttt ggagaacctt ttatgccttt acatccaacg
     6601 gtttatgcga gattgcttgg tgaaaagatt gaaaaacatg aagttaatgt ttatcttgtt
     6661 aatacgggtt ggagcggtgg aagttacggt gtaggtaaaa gaatgagtat taaggctact
     6721 agggcttgca ttaatgctat tttagatggg agtattgcaa aatgcgaatt tgaaaatttt
     6781 gaagtgttta atttagctat tccaaaagct ttagaaggtg tagaaagcac gcttttaaat
     6841 cctataaata cttggttaga taaaaatgcc tatactgaaa caagagataa gctagcacat
     6901 atgtttgtgc aaaatttcaa acgctatgaa gatgtcaaag aaggtattga atttagcaaa
     6961 tttggaccaa aaatttaagg tatttaaatg aaaaatgaaa tgtggtcagg acgctttagc
     7021 ggtgcaagcg atgagctttt aaaagaattt aatgcgagtt taaatgtaga taaaactttg
     7081 tttaatgaag atatacaagg atctatagcg catgctacaa tgcttgaaag ttgtggtatt
     7141 ttaaaaaaag aagaattaga tgctattata aaaggcttag aacaagttaa aagtgaaata
     7201 gagcaaggta aatttgtttt tgatatcaaa gatgaagata tacatatggc catagaaaag
     7261 cgtttaagcg agattatagg cagtgaaatt ggtggaagac tacatactgc aagaagtaga
     7321 aatgaccaag tggctactga ttttaaactt tttgtaaaaa aatctcacat agaactttta
     7381 aaacttttaa aagaattgat tcaaaccatg ctcgaacatg ctaaagtgca taaaaaaact
     7441 attatgccaa gttttacaca tttacaacac gctcagcctg tgagtttttc tttttatatc
     7501 ttagcttatg cttttatgtt aatgcgagat attaagcgtt tacaaaatag cctagaactt
     7561 gcagactttt cgccacttgg ttcttgtgca tgtgcaggaa caagctatgc taccaatcgt
     7621 gagttgagtg ctgaaatttt aggatttaaa gatattatgc caaatgctat ggatggagtg
     7681 agtgataggg attttgctct tgatttgctt tatgatatag cagttatttt tacacacact
     7741 tcaagacttt gtgaggaaat gattttattt tcaagctcag aattttcttt tataaccata
     7801 agtgatagtt tttcaacggg aagttctatt atgcctcaga aaaaaaatcc cgatgtttgt
     7861 gagcttatac gtggaaaaac agggcgtgtt tatggaaatt tgatttctct cttaactata
     7921 atgaaagctt tacctttagc ttataataaa gatatgcaag aagataaaga ggggcttttt
     7981 gatagtgtaa aaacggctaa agatagctta attatcttaa atgcaatgtt aaaagaaata
     8041 caaatcaaca aagaaaatat gcttaatgct tgtaaaaaag gtcatttgtt ggctaccgat
     8101 ttggcagatt atttggtgcg tgaaaaaaat attcctttta gaaaagcaca ttttatagtg
     8161 ggaaatgttg ttgcacaagc tgaagcacaa ggcattgata taagtgaaat taaagatctt
     8221 tcaaaaatag atcctgtatt tgatgaaaaa gctatggaac ttttaaattt tgaattttct
     8281 ttaaattcta agcaaagtga aggctcaagt tctattgcaa gcgtagaaaa gcaaattcaa
     8341 attttggaag gttttattca aaatttataa atattgttta ggctattttg cctaaacatt
     8401 gaatctaaaa tgcattacat cgccatctaa aacgatatag tcttttcctt caaggcgtag
     8461 ctttcctgct tctttggcgc cattttcgcc tttgtattgg atataatctt cataggaaat
     8521 aacttcagct tttatgaaac ctttttcaaa gtcattgtga attacacttg ctgcttttgg
     8581 tgctttccaa ccttttttga ttgtccaaga acgcacttca actacaccag cggtaaaata
     8641 actgatcagt ccaagcttag caaaagcagt gcgtatgatt tgatcaagac cgctttcgtt
     8701 aactcctaga gaacttaaaa attcatgact ttcttcatca cttaatccta ctaattcttc
     8761 ttcgattttt gcacaaagct tgataacttc atgatcattt tttttagcat attcttttaa
     8821 agcttttaca taatcattat cttcactaat accattttca ttaacatttg caccataaat
     8881 cacttcttta gcagaaagca gtcttaattc tttgattaag gcttgataaa tttcactttc
     8941 tttttcaggg taagaacttg cagctaagcc tttgtttaaa tgatcaagta aggaatttgc
     9001 aagttcgaga ctttctttag cacccttttg attggctttg gcttctttgg tgagtttttc
     9061 tattttttta ctaagttgct caatatctgc taaaataagc tctgtattga taatttctac
     9121 atcacgtaaa ggatcaactc caccttcaac atgggtgata ttttcttcat caaaacaacg
     9181 cactatgtgt aaaataacct cagtttcacg tatatttgaa agaaatttat ttcccaagcc
     9241 ttcgccttta cttgcacctt taacaagtcc agcgatatct acaaattcta ttaaagaatg
     9301 cataattttt tcaggtttta cgattttggc aagttcatta agtcttaaat caggaacttc
     9361 aaccatggct ttgttaggct ctatggtgca gaaaggatag tttgcgcttt gggcattttg
     9421 tgctttagtt aaagcattaa aagtcgttga tttgccaaca tttggaagtc ctactatacc
     9481 tacacttaaa ctcatttagc tttccttaaa atttgaatta aataattaac gcacattcta
     9541 actccagctc cacctgcgcc aaaactagaa tatccccaag atttttctgt ataagcaggt
     9601 cctgctatgt caagatgtag ccatttgtct ttatattctt tacgaataaa tttatctaaa
     9661 aataatcctg cggtaattgc acctccgtag cgactagagg cagtgttgct aacatcagca
     9721 atatttgatt ttataagttc tcttaagtga gggttgaaat gtaagattgt ggtatattct
     9781 ccactttttt tggagcttag ataaaaatca ttttgcaatt cttcattatt tcccataata
     9841 gcgcttgtaa attctccaag tcctacaacg caagctccag taagagttgc catatcgata
     9901 agtaaatcag gttttaaatc ctgtgcaaaa gaaagacaat cggctaaaac caagcgtcct
     9961 tcagcatctg tatttcttac ctctatgctt acaccttcac gactaattaa cacatcatca
    10021 ggcttataag cattgccgcc tatcatattt tcagttgcac ctaaaatgca atgcacttct
    10081 aaatctaaag caagttcagc tacggctttt atgattccca ttgctgctgc tgcaccgctt
    10141 ttatcagctt tcattgtaag cataaaatca gctggtttta agcttaatcc accgctatcg
    10201 taagttaagc cttttccaac aaatacaaca cgtttttttg catttgtggc tttataactt
    10261 agatgaatga ggcgtggagg atgtactgag gcgcgattta ctgctaaaaa ggcattcatt
    10321 ttttctttag ctaaaaattt ttcatcataa attttacaag tgatgttttt attttcttta
    10381 gctaaatttt gtgcatcttc tgccattttt aaagaggtgt aaatttcagg aatttcattg
    10441 actatatttt tggtaaaatt tgtagcattg gctaaaattt ctccacgctc taaacctatc
    10501 ttagcttcat ctttattaaa ttttttacca tttaattctt cacttgaaat aataaatctt
    10561 tctaaagttc ttgttttttt ctcgctttta tatttgtcaa atttataagc tccaaaaagt
    10621 acgccttcaa ctaaagatgc aaaacttcta actacacaat ctcctattat gctaggaagt
    10681 tttacgcttt taatattaag tttctcaaga gttttatatg ctgtgcaaag acttaatctt
    10741 atatcctcat aagcaagact tttaagctct aaataaagct ttttattgtt taagtctaat
    10801 aatgcacctt cacctttgta attattaagt ttaaaaaaat ctttttcttt gttaaaaatt
    10861 tttaaatttt tatcctgtat aaaaacaagt tcaaagtctg cttttatagc atctagtttt
    10921 ttatcgttta attcaaattt catgattttt tccttttatc tttaagtata gctttttcca
    10981 tttgtttaaa accaaataat aaaagggata aaaaagctat aataataatg gctgcataat
    11041 accaatgttc ttcagcccaa gtcaccatct tccaaatttg ttctccaaaa taccaagcta
    11101 aaagtatagt gattgatgcc caaacccaag cactaaaaag attgataata gcaaattttt
    11161 ttgcactata acgcgtgatt cctatactca taggtataat ggttctaaag ccatacatat
    11221 agcgttgtat aaaaataata ggccaaccaa aacgttgtaa aagtaggtgt gctactgcaa
    11281 atttacgcct ttgagttttt aatttttttt gtatgtagcg tttattatat cttcctatat
    11341 agaaataaat ttgatcgcct acaaaaccgc caagacctgc tataaatata acaaagccta
    11401 aatttacatg tccttgatgg gcaaaaatac ctgctaaaat taaagctaac tctccttcta
    11461 aaatacacca taaaaaaata ataatataag ctagatcttt gtattggtaa agtaaatttt
    11521 ttaaaaattc ttccatttgt acctttctat agttttaaat ttctaaaaca ctataaactg
    11581 aagtaagttt ttcaagttta tttgctccat ttaaatcttt aagattcatt aaaaaacaag
    11641 cttcaacaca ttttgctcca gctttttgaa tgagttcata tgaagctata gctgttccgc
    11701 cagttgctat taaatcatct acaagtaaaa ctcttgcatt ttgaatattt ttaaatgcat
    11761 ctttatgaag ttctacttta tcgctgccat attcaagatc gtattcgcag ctaaaggttt
    11821 caaaagggag ttttccaggt tttctaatag gcacaaaagg aagattaagt tttgcacaaa
    11881 tcatagatgc aaagataaat cctctgcttt ctgttcctgc tatgaagtct agattgtaat
    11941 ctttgtagcg ttcttttaaa tgtttaagta gaaaatttaa agcctctttg ttatttagta
    12001 gagtggtaat atctctaaag ataattcctt tttttggaaa atcaggaata attctaatgc
    12061 tatcaagcag gtatttttgt tcttcttgtg ttagttttat cataataatg cctcgatttt
    12121 tgcttctaat tctttaattc tttgtcttag tttgtcattt tccaaacgat attgagaatt
    12181 tctagttctt aaagatgtaa ggtctgcttt gattttatta agttcttctg tgagtatatc
    12241 tatatttcca agacttcttt gaagttgaat ttgtagtttt ctaatgacaa tctcagtatc
    12301 atcaagattg tttttgataa aatcttttga tgttttttct ttattaagta gagttttata
    12361 gtaaaacaac attacaataa gatagatagt tgcacaaatc aatatagtta aaacaagcca
    12421 gtttgtaaac attatatttt tacctcaatt ttttgaattc tttgcatatg tctcccttct
    12481 tcaaaaggag tttgaatgaa tttttctata atatctatag ctaattcaac cccgattaat
    12541 cttccgccta atgccaaaac attggcatca ttatgccttc ttgcaagttc tgcacttaag
    12601 ctttcatgac ataatgcaca acgaatgttt ttatgacgat ttgctgcaat agaaattcca
    12661 attccacttc cacaaataag aatgccaaag cttcgttcgt ctattttttc ggcaagtaaa
    12721 tgtgcataat caggataatc gcagcttgcg caagtgtttg ttcctaaatc gttaaaaatt
    12781 atattttttt cttttaaaaa tacgcaaatt ttttctttta attcaaaacc agcatgatca
    12841 ctagcaatat aaattttttc cctaagcatt ggtttcctac attactatat aaaataagat
    12901 aaaaacctaa tcttatcata ttaaatcata aaaacagctt ttcttttttt aaaaataagc
    12961 tttatttttc tttatatatg ttagaattac gtgacaagaa aaataaaatt tcaataaatt
    13021 aaggggagaa gaaaatgaag ctcatactca taggatcttc aacaggtggt cctaatcagc
    13081 ttaaatttct tttaaaggat attgatataa aaaatacttg tgtagttata gctcaacaca
    13141 tgagtgccag ttttattcca tcttttgtgg ggcaatttaa taaagaagct tttagtgaag
    13201 tgtgcttatt gaatgataaa gagatattaa gcaataaaat ttatatttgc cctaaaaata
    13261 ctattttatc tggaaattta aatattgtag ccgcttggca agatgtggct tcaagcttta
    13321 aaccgagtgt ggatttactt tttcattccg ctgtttcttt ggtaaaaaca aataaaatac
    13381 ttgctattat tttaacgggc atgggagatg atggtgcaaa aggtttattt gagctttata
    13441 aaacaggagt tagatgttta tgcgagaatg aagcagatag tgtcgtttat ggtatgccaa
    13501 aaagagcaaa agatatgaat ccgcatttaa aacctatgag cttaaaagaa attaaaaaag
    13561 aaattgtaaa ttttattgat caggattaat aaaaggaaaa ttgcatggaa aaaaaaataa
    13621 ctcctagcga attagaactt aatgaattta taaaaattat ca
//
LOCUS       DARBAC010000041        13600 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.041, whole genome shotgun sequence.
ACCESSION   DARBAC010000041 DARBAC010000000
VERSION     DARBAC010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13600
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.041"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..584)
                     /locus_tag="SB799_000900"
     CDS             complement(<1..584)
                     /locus_tag="SB799_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEG0868150.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNVNFSLNKNDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIRNLIQDGLENFNLQKNDNLILEFFDFFSLKKQILEQKPYELSGGEATRVGLIR
                     ALVLNPKLLILDEITSALDIKTSKEILTFLYDYQ"
     gene            complement(577..1287)
                     /locus_tag="SB799_000901"
     CDS             complement(577..1287)
                     /locus_tag="SB799_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868151.1"
                     /translation="MKVRNLNISLKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKERKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKENASKIISILEELKNTAALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLDEFLRYYNA"
     gene            complement(1284..2078)
                     /locus_tag="SB799_000902"
     CDS             complement(1284..2078)
                     /locus_tag="SB799_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868152.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLAPFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGVGGSLLSIIFALCYLFLARCFFYVFWMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            complement(2065..3009)
                     /locus_tag="SB799_000903"
     CDS             complement(2065..3009)
                     /locus_tag="SB799_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868153.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLYFSKGSIAYANGVNSQSKEFV
                     QRIEQNLGLDKPLLEQYKIWLFKALKGDLGVSFLSGESVLKLIKERIFNTFILGFSAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYEGLGSLLFKSIIFKDY
                     PVVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(3009..4544)
                     /locus_tag="SB799_000904"
     CDS             complement(3009..4544)
                     /locus_tag="SB799_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0868154.1"
                     /translation="MLRFLIFAMLLFVNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLMRFDENMSLKPDLAKSWDVSKDGLVYDIFLRDDVLWHDGVKFSADDVK
                     FSIEAFKNPKNNSSVYVNFEDIKSVEILNPSHVKITLFKPYPAFLDALSIGMLPKHLL
                     ENENLNTSSFNQNPIGTGPYKFVKWKKGEYVEFKANEHFYLDKVKTPRLIIKHIFDPS
                     IASAQLKNGKIDAALIDVSLLNIFKNDENFGILREKSADYRALMFNFDNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWANSKNFKIYKYDPKKAEDLLVGAGFK
                     KNKDGNFEKEGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKTRTLGHHGVGFTWNVYE
                     WSK"
     gene            4880..7200
                     /locus_tag="SB799_000905"
                     /pseudo
     CDS             4880..7200
                     /locus_tag="SB799_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009883064.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            7211..7867
                     /gene="dmsB"
                     /locus_tag="SB799_000906"
     CDS             7211..7867
                     /gene="dmsB"
                     /locus_tag="SB799_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit B"
                     /protein_id="HEG0868155.1"
                     /translation="MKLEENSQFGFMLDQSKCVGCRTCSLSCKDYKNMPVGVNFRRVF
                     ETEGGNWTAKEDGSFEQNVFAYYTSISCNHCSNPSCLKACPTGATMKIKWGIVAIDDS
                     MCIGCKACAMACPYGAPQFNHESGHMSKCDGCYERLKEGKNPICVDSCPFRALKAGDI
                     TKLREEHGNLASITPLPDASITHPNLCIVPEKHSLPSGNKSAIFHLPQNYQGVKNDII
                     "
     gene            7854..8018
                     /locus_tag="SB799_000907"
     CDS             7854..8018
                     /locus_tag="SB799_000907"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868156.1"
                     /translation="MTSFNHILSEMPLVLFTILAQAVIGLSLVYAPAFINGYKNYANL
                     KSFGLALELQ"
     gene            8015..8344
                     /locus_tag="SB799_000908"
     CDS             8015..8344
                     /locus_tag="SB799_000908"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868157.1"
                     /translation="MMVAFIPSFFHLNDITHIFNVLNRMGVFYANNEWYIGWMNNEIL
                     FVSLVCALGFLLYLKTSNWVFYLTLICGILGLFFMSGAYMAPCKKVCLLGILRSLCFI
                     FLLVLYF"
     gene            8272..8748
                     /locus_tag="SB799_000909"
     CDS             8272..8748
                     /locus_tag="SB799_000909"
                     /inference="COORDINATES: protein motif:HMM:NF016838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HEG0868158.1"
                     /translation="MQESVPTWDFKITLLYFFASAIFLGAIVYYCFFENSEHERKMSF
                     FTGLIGIGLLSTAIVLQTLHVGQTWIMGLVNPFELLGGTYDWFISLSFAFLGLGTVTW
                     YLHNYLHEKFKSKFFAYFALLCAFLGVFTTRMLFYGLICWDILNAKISNRYIYQFL"
     gene            8805..9263
                     /locus_tag="SB799_000910"
     CDS             8805..9263
                     /locus_tag="SB799_000910"
                     /inference="COORDINATES: protein motif:HMM:NF014651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEG0868159.1"
                     /translation="MVFKNNSKLQYTALKLLSSSNEDDKLIASDFTSLFLSDVDYVKT
                     PPFASFYLDENKEIYSDNSDKIKQIFVQNNFFSFFNKEPADSLINELLFISFLIKKQD
                     DIILQKFLKEEFFTWFNMWSFDVINKAKTHFYKALTMLMQDFFNQLNTKF"
     gene            9330..9752
                     /gene="cgb"
                     /locus_tag="SB799_000911"
     CDS             9330..9752
                     /gene="cgb"
                     /locus_tag="SB799_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HEG0868160.1"
                     /translation="MTKEQIQIIKDCVPILQKNGVDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRNFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAEFYIDIEKKLYDK"
     gene            complement(9772..11403)
                     /locus_tag="SB799_000912"
     CDS             complement(9772..11403)
                     /locus_tag="SB799_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HEG0868161.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNVDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKNKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(11440..12747)
                     /locus_tag="SB799_000913"
     CDS             complement(11440..12747)
                     /locus_tag="SB799_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868162.1"
                     /translation="MRKLKFGTKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMSEFWALLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPGYETLGFLAPVLLILIRIFQGIAIGGELPGAWVFVREHCQEKQKAFFLSCLNSAM
                     ALGILLGSIVFLIINAFFSIEEIAAYAWRIAFFVGGIFGIISIYLRRFLQETPVFKQM
                     KKESSLSSFPLKDLFKEKDIVKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQILGILGIALGGAFMGYLVDKFGLFKICIFFSLTFVFFSFLYFYALYELKNLV
                     LVCILYSIVCFLGGINVFAPILMSEVFRAKIRFSGISFSYNIAYAISGGITPQLVFWL
                     NTLASKNENPFLYGMSIYMIFLALLAICAVFIVKDKIKFDNHS"
     gene            12835..>13600
                     /locus_tag="SB799_000914"
     CDS             12835..>13600
                     /locus_tag="SB799_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0868163.1"
                     /translation="MFNFIITLLKTNLYFLEEKITSKSSNQTHIISLKQSDDEFLNLL
                     FSFLVPQSDEDKNFIEKTRTKIKRNEHNIALIKNPNFNALIDTGFLDTIDTLKEKLHT
                     HKTDFKDITHIILTRAHPDHIGTLMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTL
                     LKLKNIEFINHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIP
                     KPKIAIKFDIDQNEAIQTRKKLLKEFKERKLKVIGTY"
BASE COUNT         5245 a         2193 c         1810 g         4352 t
ORIGIN      
        1 tgctgatagt catataaaaa agttaaaatt tctttagaag ttttaatatc aagcgctgaa
       61 gtaatttcat ctaaaatcaa taatttagga tttaaaacca aagcacggat aagacctaca
      121 cgtgtggctt ctcctccgct taactcatag ggcttttgtt ctaaaatttg tttttttaga
      181 ctaaaaaaat caaaaaattc taaaatcaag ttatcattct tttgtaaatt aaaattttcc
      241 aaaccatctt gtataagatt tctgattttt ttataagggt ttaaagccat tttttgatct
      301 tgaaagcaat actgaatttg ctttcttaaa agtctttgtt tgtttttatc aagcttgtgc
      361 aagttaagat tttcatacca tacctcacct tcacttggat cttctaaaaa acaaagaatt
      421 ctagctaatg tgcttttacc tgcaccactt ttacctaaaa ttattaaatt gtcattttta
      481 tttaaagaaa aattgacatt atcaaaaata atatgtcttt ctttttttaa ataccaatgc
      541 tttttaagct cataaaactt acttaaatta caaactttaa gcattataat accttaaaaa
      601 ctcatctaag ctatataaat ttgaactatt tttttctagc ataagaattt catctgctaa
      661 agaatttacc aaatttaaat catgagtgat acaaactaag gctgcagtat tttttaattc
      721 ttctaaaatc gatatgatct ttgaagcgtt ttctttatcc aaagaagctg tgatttcatc
      781 acaaattaaa atttggggtt gatttaataa tgccaaagct aggctcaccc ttcttgccat
      841 acccaaactt aattcattag cataagaatg ccacaaacga tcaagatttt caaatcctaa
      901 tttttgaaaa taagaaaaag cgtaatcttt tctttctttt tgttttaatt ttgtatgagt
      961 ttttaaaaca agatgacata aatttccaat atccaaataa ggataaagac taagctctgc
     1021 atcttgcaaa acaagtgcca ccttagaacg aaaatttcta agctcttctt tgttaaaatt
     1081 aaaaatacaa gaattatgaa aacttaattc atcaaaactt attgtgaaat tagaatctaa
     1141 aagtcttacc aaagcttttc ccaacaaact tttgcccact ccactttgtc ctagtatcat
     1201 taaagttttg cctgttttta tatctaaatt aatatcctta agcaataaat tattcttcaa
     1261 actgatattt aaatttctta ccttcaagat cttatacccc aaattttttg taaaaaatta
     1321 cccaaccata aaagaggtaa aaacaacaaa agcaagctta aaagtggaaa aagtatcatc
     1381 caccaagcac ctataaaaac tgcttttgaa gactcactca aaagagtacc taaagttgga
     1441 atttcaaatc ctaaacccag tccaaaaaaa ctcaaagtag cttctgtggc tatagcatga
     1501 acgatattaa atataaaaag tgtaaaaatc agtgttttta aagcaggtat taaatcttta
     1561 aaaaaagctc taaatttagt tcttccaagc actatatttg ctttgtaaaa atctaaattt
     1621 tcaagtcttt ttaattcact ttctataatt cttgctatga aacaccaatg aattaaagcg
     1681 attaaaaaaa tcatcaaaaa cacatcagaa gttatcatac tttgaaaaaa catcataagt
     1741 aaaaaagcag gcaaggctaa aaaaaactct aaaatacgca tccaaaaaac ataaaaaaaa
     1801 catcgcgcta aaaacaaata gcacaaagca aagataatag acaataaaga tccaccaaca
     1861 cctataatca aagaatttct caaagcaaaa agcaaacgag aaaacaaatc tctgcctaaa
     1921 aaatcagtcc ctaaaatata agtaaaatta ggagcttgat gcaaattttc taaatgagta
     1981 cttaaaatat caaaaggagc caaaaaaggt gcaaacaagg cgcataaaaa caaaaaaatt
     2041 aaaggcgcaa gaatgataag aaatttaaac aaaatcaagc cttcttaatc taggatttaa
     2101 aatcctagct acaatatcac ttaaaaatgt aaaaaatgcc gcaagcaaaa cactaaaaaa
     2161 tataagcgca agcacaacag gataatcttt aaaaataata cttttaaaaa gtaaagaccc
     2221 aagcccctcg taagcaaaga cactttctac cacataagtt cccatcataa aacttaaagc
     2281 acttccccca aaataagcca caataggact taaagaatat ttcaaaacta aaaaataaat
     2341 atctttctcc cttaaagccc tagcgtataa attttgaata aaaatttgag aaaaactttc
     2401 attgataaaa tttctagcaa tccttaaaaa taacgccaaa tgtgataaaa cgagcaccaa
     2461 aacaggcaaa atcaaatgct ctaaacgatt taaaaaatca tcttcaaaac ctatatcact
     2521 gcttcccata acaggcaaaa ttttccaaaa aattccaaaa atcaaaacaa acaataaagc
     2581 caaaacaaaa ggaggtaaag caaaaaaatt aaaagctaaa aaagtaataa ttttatctat
     2641 aaaactttct ttataataat atcccaaaag tgccaaaaaa acactgagta aaaataaaag
     2701 cattaaggca ctaaaaccca aaataaaagt attaaaaatt ctttctttta taagctttaa
     2761 aacactttct ccgcttaaaa aagaaactcc caaatctcct tttaaagcct taaaaagcca
     2821 aattttatac tgctctagca aaggcttatc aagccctaaa ttttgttcta ttctttgaac
     2881 aaattcttta ctttgtgaat taactccatt agcataagct atactgcctt tactaaaata
     2941 aagtaaaaca aaacataaaa aagtgctaaa aaatgctatg aaaatactaa aaactaagcg
     3001 ttttagcact atttactcca ctcataaaca ttccaagtaa aacccactcc gtgatgacct
     3061 aaagtccttg ttttgatacc ttttaaatct ttattataaa ctaaagcaaa atcaagataa
     3121 gctaaaaaaa taaaaggagg attttcatac aaagcatcta taaaatcttt ataatatttt
     3181 tttctctctt ccaaatttga agtatttctt gctttttgca aggctatatc cactttttta
     3241 tcatgataat gtccaaaatt ccaaccctca tcatttaaag cactatcttg cgaactttca
     3301 aataccctaa aagtgtgaaa atcaggatct aaaggacttc cccagcctat taaaaaacta
     3361 tctactttag aataatcaaa acttccagca ggtttagcca ccaccttgct tacaactcct
     3421 atttttctaa attcgctttg caaaattcca gctaaactta cccttaaagg atcattactc
     3481 atcgcccaaa tttcaaattc taaaattttc ccttcttttt caaaatttcc atctttattt
     3541 ttcttaaaac ctgcacctac aagcaaatcc tcggcttttt taggatcata tttgtaaatt
     3601 ttaaaattct tagaatttgc ccaagaacgc tctaaagggt gattggctac aaaagcataa
     3661 tcatgtaaaa gattttttac tatactttct ttatcaactg cgtaatttaa ggcttgtctt
     3721 acttttaaat cttttaaaaa ttcattatca aaattaaaca ttaaagcccg ataatcagcc
     3781 gatttttcac gcaaaattcc aaaattttca tcatttttaa aaatatttag caaagaaaca
     3841 tcgattaaag ctgcgtctat cttgccattt ttaagctggg cactagctat agaaggatca
     3901 aaaatgtgtt ttataataag tcttggagtt tttaccttat caagataaaa atgttcattg
     3961 gctttaaatt caacatattc accttttttc cattttacaa atttataagg acctgtacct
     4021 ataggatttt gattaaaaga acttgtgttt aaattctcat tttcaagcaa atgtttagga
     4081 agcattccta tgcttaaagc atctaaaaat gcaggataag gtttaaaaag tgtgattttt
     4141 acatgagaag gatttaaaat ttccacactt ttaatgtctt caaaattgac ataaacagaa
     4201 gaattgtttt taggattttt aaaggcttct atactaaatt tcacatcatc agcactaaat
     4261 ttgactccat catgccataa aacatcatct cttaaaaaaa tatcataaac aagcccgtct
     4321 ttactaacat cccaagactt agccaaatca ggttttaaac tcatattttc atcaaaacgc
     4381 ataagccctg aaaatacaag attaatcact gcatcatgat cctcactata agcaggattt
     4441 atccttgcga tttcattttc aactgctata ataagtgtat cttttgggat ttttgcttct
     4501 aaattcacaa acaacaacat tgcaaaaatt aaaaatctca acataaaaaa cctttttatt
     4561 ttaataacgc acaaaattat aaaacaaaaa agctcaactc gcaagcctat acgggggata
     4621 aagttatatt ttagttataa atttatattt aaatactatt ttaataaatt tttatcatta
     4681 tattattcaa atttttattt tttgaagtta aattcataaa cgaaaaattc attataaagc
     4741 ctatatttat gagttttaaa gtcttaattt taattgaata aaattattat ttgtactata
     4801 atcgcaatta ctttttgtca cataaatgta aggagataac acggaacaaa atcgtagaga
     4861 ttttttaaaa tggagttctt tgtttggcgg cttaacctta agtcctataa gtctaaatgc
     4921 aaatttatta aaaactccac cattgatcag caaatgggct ggatgtaatg taaattgcga
     4981 aacaaaatgt cctgtaaaag tgcatactca agatggaatt ttaaatatgt tagtactgat
     5041 catgaaggtg atgatagctt tgataatcgt caagcaagag cctgtattag agggcgtagt
     5101 tcaagatata aagtttacaa tgcaaatcgc ttaaaaagac cattaaaaag agtgggaaaa
     5161 agaggcgaag gtaaatttat gcctatttct tgggaacaag cttttgatga aatttctgcc
     5221 aaaatgcaag aaattaaaga aaaatacggc aatgaagcct tttatataaa ttatgcaaca
     5281 ggaacaacag gaacaataat caatcgctgt acacaaggtc catgggctag acttttaagt
     5341 ctttatggtg gttatttaaa ttatcataat tcttattcta cggctcaaat ttcaaatgct
     5401 atgaattttt tctatggtgg atctcctgct agcgatatat acactttacg ctctgcaaaa
     5461 ttagctatat tttttggagc aaatcatgtt gaaactagaa tgggaggtgg tggagtaggc
     5521 tatgcttatc aaaaagcctt agaagaaagt ggatgtaaaa taattcacat tgacccaaga
     5581 tacaatgatt ctatgataag gcattgcgat gagtggatac ctatagcacc aggaaccgat
     5641 gcagctttaa ttgctgcgct aacttatgtg atgataaaaa aagatttact tgatagaact
     5701 tttcttgata aatacaccat aggctttagc gaaaatactc tgccacaaga tgcagccaaa
     5761 aactcaagct atgaaagcta tgttttagga ctaaacgatg gagtagaaaa aactcctgat
     5821 tgggctagca agattacaaa aattccggca cgccgcatag ttcaacttgc aagagaaatt
     5881 gccaccataa agccttgttt tatagaacaa ggttggggag tgtaaagaca ttcaaatgga
     5941 gaacaaaatg caagggcgat agcaactcta gcttgtatta caggaaatat tggcatagaa
     6001 ggtacaaata caggatgtcg aacagggtca agtaaaacat atgatataat gggtatgcct
     6061 tttaaaaatc caataaaaga ttccattcct tgttttttat ttacagacgc tatttatcgc
     6121 ggaaaagaaa tgacagatat tagtgatggg gtgcgtggca caacacaatt aaaacaaaat
     6181 attaaattta ttttcaatac agcaggaaat tgccttacaa atcagcacag caccattaaa
     6241 gaagtgcatg atattttaag cgatgagaat ttgtgtgaat gtatagtaga tattaatgta
     6301 actagaactc catcaaataa ctacgcagat tatatcttac ctgatgcaac tatgctagag
     6361 caagaagatt ttataagacc tagcgcagga tattatagca ataagcctta tattatttat
     6421 tgtcaaaaag ctatcgagcc agttagtgaa gcaaaaccta tttatgaaat gtgtcttgaa
     6481 cttgctaaaa gacttggtat agaaaaagaa tttagcgaag gaagaacaca aaaagattgg
     6541 ctaaaaacct ttatgaagaa agtatgaaaa aaaccacttt tacctagttt tgaagaaatg
     6601 tgcaaaaaaa ggacttgtaa aatttgagcc tgtaaaacct gtagtggcat tacaaagttt
     6661 tataaaagat cctatcaata atcctttaaa aactcctagc ggaaagatag aaatttatag
     6721 cacaaaactc gcacaaatgc aaaaaacttg gaaattaaaa gaaggacaac aaatagtgcc
     6781 tattcctgtt tttgaaagcc aaagagaagg gattttggat ccattaaaaa aaagtatcct
     6841 ttgcaatttt ttggctatca ctacaaaggc agaacgcatt ctagcttttg ggaaattcca
     6901 caaattagag aagctaatcc gcaagaaatt tggataaata ccatagatgc agagcaaaga
     6961 agtatcaaaa cgggcgatgt ggtgcaagta agaaatgact taggaatcat acaaggcata
     7021 gcaaaagtta ctccaaaaat cataccaggt tgtgcagtaa ccccacaagg tgcatgggca
     7081 aaatatgaaa atggtatcga tatgggaact tgtgtaaatt ctttggcaag tatagtacca
     7141 actgctattt ctaaaggaaa tggacaacat tctattttag ttgaaattgc aaaagtttaa
     7201 ggagaaaaag ataaaattag aagaaaattc acaatttggt tttatgctag atcaaagcaa
     7261 atgcgtaggc tgtaggactt gctcgctttc ttgcaaggat tataaaaaca tgcctgtggg
     7321 ggttaatttt cgccgtgtat ttgagactga agggggaaat tggacagcta aagaagatgg
     7381 aagttttgag caaaatgttt ttgcttacta cacttctatt tcttgcaatc attgttctaa
     7441 tccatcttgt cttaaagctt gtccaactgg tgcaacaatg aaaataaaat ggggaatagt
     7501 agcaatcgat gatagtatgt gtataggctg caaagcttgt gctatggcat gtccttatgg
     7561 cgcacctcaa tttaaccatg aaagtggtca tatgagcaaa tgcgatgggt gttatgagag
     7621 attaaaagaa ggtaaaaatc caatttgcgt ggactcttgt ccttttagag cattaaaagc
     7681 aggcgatata acaaaactga gagaagaaca tggaaattta gcctctatca cacctttacc
     7741 tgatgcttct atcacgcatc cgaatttatg tatagtgcct gaaaaacata gtttgccttc
     7801 aggtaataaa agtgcgattt ttcatctacc tcaaaactac caaggagtta aaaatgacat
     7861 catttaatca cattttaagc gaaatgcctt tggtgttatt tactatttta gcacaagctg
     7921 taattggact tagtttggtt tatgcacctg catttataaa tggttacaaa aattatgcaa
     7981 atttaaagtc ttttggatta gccttagaat tgcaatgatg gttgctttta tcccttcatt
     8041 ttttcattta aatgatatta cacacatttt taatgtatta aatagaatgg gtgtttttta
     8101 tgcaaacaat gagtggtaca taggctggat gaataatgaa attttatttg tatctcttgt
     8161 gtgtgctttg ggttttttac tttatctaaa aacttcaaat tgggtgtttt atcttacgct
     8221 aatatgtgga attttaggac ttttctttat gagtggagct tatatggctc catgcaagaa
     8281 agtgtgccta cttgggattt taagatcact ttgctttatt tttttgctag tgctatattt
     8341 ttaggcgcta ttgtttatta ttgttttttt gaaaatagcg aacatgaaag aaaaatgtcg
     8401 ttttttacag gacttatagg tatagggctt ttaagcactg ctatagtttt gcaaacccta
     8461 catgtaggac aaacttggat tatggggctt gtaaaccctt ttgaactttt aggtggaacc
     8521 tatgattggt ttatatcgct ttcttttgca ttcttaggac ttgggactgt tacttggtat
     8581 ttgcataatt atttacatga aaaatttaaa agtaaatttt ttgcttattt tgccctactt
     8641 tgtgcatttt taggggtatt taccaccaga atgctatttt atggacttat atgttgggac
     8701 attcttaatg caaaaattag caatagatat atttatcaat ttttgtaaaa tccacctaat
     8761 cattttttgc taaaaaaact taaaaaagaa gaattctggc aaaattggtt tttaaaaata
     8821 atagcaaatt gcaatacacc gctttaaagc ttttatcatc ttcaaacgaa gatgataaat
     8881 taatagcaag tgattttaca tctttgtttt taagcgatgt tgattatgta aaaacaccgc
     8941 cttttgcttc tttttatctt gatgaaaata aagaaattta ttcagataat tctgataaaa
     9001 ttaagcaaat ttttgtgcaa aataactttt tttctttttt taataaagaa cctgcagata
     9061 gcttgataaa tgaattatta tttattagtt ttttaatcaa aaaacaagat gatataattt
     9121 tgcaaaaatt cttaaaagaa gaatttttta cttggtttaa catgtggagt tttgatgtta
     9181 tcaataaagc taaaacacat ttttataaag cattaacaat gttaatgcaa gactttttca
     9241 atcaactaaa tacaaaattt taacacaagt caattttttt ctccttttta agatatataa
     9301 tatctctttt acattaaaaa ggagaaatta tgacaaaaga acaaatacaa atcatcaaag
     9361 attgtgtgcc tattttgcaa aaaaatggag tagatttaac caatgagttt tataaaataa
     9421 tgtttaatga ttatcctgag gtaaaaccta tgtttaatat ggaaaaacaa atttcaggag
     9481 aacaaccaaa agctttagcg atggcgattt taatggcagc taaaaatata gaaaatttag
     9541 aaaatatgag aaactttgtt gataaagttg ctataactca tgttaattta ggggttaaag
     9601 aagagcatta tcctatagtt ggagcttgcc ttttaaaagc cattaaaaat cttttaaatc
     9661 ctgatgaagc cactcttaaa gcttgggaag ttgcttatgg aaaaattgct gaattttata
     9721 tcgatataga aaaaaagctc tatgataaat aatataagcc cattttgggc tttaatcaaa
     9781 tttttctact aaatttttag ctaattcctt tatattctca ccctttaatt cgctgatttc
     9841 accattttga gccaagaaaa ttctatcagc actatcaaaa tatgcatcat catgtgtgat
     9901 agcaaagatt gttttacctt gctcttttag caaaggtaaa agttttttat aaaaaaatct
     9961 tctaaaaaca ggatcttgat cagccgccca ttcatcaagc actaaaatat ccctttcttc
    10021 aagcaaggct ataagcatag ctaaacgctt tttttgccct gtagaaagtt tggttaaggt
    10081 cagttcatta tctttgacac ttgttttatt tttaagttct aaaaactcca accaaaaagc
    10141 aattttttct tcgcttgcaa aattttcttt atttaaggtt ttagtaaaaa gatgaaaatc
    10201 gctaaaaaca gcagaaataa gagatctata ctcatctaca tttttatcat ctataagcgt
    10261 atcatcaaca taaattccgc ctttgcttgg cttaaaaagt cctgtcaaaa gcatacaaaa
    10321 agtggattta ccacttccat ttttacctat taaaaatacc aattcacctt ttttaagttc
    10381 tatatttaca ggatttaaat gaaaattttc ttcataagca aattgagtat ttctaaaaga
    10441 aatttttttc cattcactga tataatgtgt ttttttaaaa ccttctatat aatcatctaa
    10501 ttccaatttt gcgatcttat ccaaagcgat ttttgccaaa agcaaagtag gaaaagatcc
    10561 tatcatagat actaaagggg ttcgtaaaaa caaaatagaa agagctatag ttgtagcatc
    10621 tgcaacactt gcccattcaa attttaaagc taagtaaaac tctacaccca ctaaagccaa
    10681 aagagttaca tttgtccagt tgtttgagag attgttaaaa agattaccta aagtactatt
    10741 tttctttttc aatcttgcat tattttcaaa ttcatcttca taataaagct tggctctatc
    10801 acgattgatc aaaagttctt tatgtccatc tagtatattt tggtaattat tttgcaaagc
    10861 atcatcattt tcccttgcct ttctaaaata ctgatatact ttcatcatca aaaaattatt
    10921 agtaataaaa ataaccataa tccataccac acacaaagca aaaatttgtg gtgaaagata
    10981 acataaataa acactagtgc ataaaatcaa tatacttgat tgtaaaaaat caggcaatct
    11041 taaaagccca aaagatatat ttctcacatc acttcccaaa gaagctaaaa ttctagcctt
    11101 acctacttta gccactctta acaaaggggt atctaatatc tgctttacta cacgcctttg
    11161 cattttaaaa ataaaatttt gtccaaaaat actaagtcca agttcaacta tggtagaact
    11221 tataaaaaat atcaaaagca aaacaataaa ataaaaaata ggaatgtttt gtgcattttt
    11281 aagcaaataa tcattgataa aaacaagagt taaaactcca acagcacttg taataaaaga
    11341 aaaaagcaaa aaagaaatca actttaattt attttgttta agtaattcca taataaaagg
    11401 catttataaa ctccaaaata taattttaat tataacattt taagagtgat tatcaaattt
    11461 tattttatct tttactataa aaacagcaca aatagccaat aacgctaaaa aaatcatata
    11521 tatactcata ccatataaaa atggattttc atttttactc gcgagtgtat taagccaaaa
    11581 aacgagttgc ggagtaatac cgcctgaaat tgcataagca atattataag aaaaagaaat
    11641 tcctgaaaat cttattttag ctctaaaaac ttcactcatt aaaataggtg caaacacatt
    11701 aattccacct aaaaaacaaa caatggaata caaaatacac accaaaacca aatttttaag
    11761 ctcatataaa gcataaaaat ataaaaaaga aaaaaataca aaagttaaag aaaagaaaat
    11821 gcaaatttta aataaaccaa atttatctac aagataaccc ataaaagccc cgcctaaagc
    11881 tattcccaaa attcctaata tctgtaaata acttccttca accccactta aatttaaaat
    11941 actaggcata aatttaggca ttaataaaac aagcacaata acacaacctg ttaaaaccca
    12001 agtcatcatc attgatgaaa ataaattttt tacaatatcc ttttctttaa ataaatcttt
    12061 aagcggaaaa gaactaagcg atgattcttt tttcatttgt ttaaaaacag gagtttcttg
    12121 caaaaatcta cgcaaataaa tagaaataat cccaaaaatt ccacctacaa aaaaagcaat
    12181 acgccatgca taagcagcaa tttcttctat gctaaaaaaa gcattaatga ttaaaaatac
    12241 tatacttcct aacaaaattc ctaaagccat agctgaattt aaacagctta aaaagaaagc
    12301 tttttgtttt tcttgacaat gttctcttac aaaaacccaa gctccaggca attctccacc
    12361 tatagctatg ccttgaaaaa ttcttataag tatcaataaa acaggagcta aaaacccaag
    12421 agtttcataa cctggaataa aagctaagac aaaggtagga agaaccatta gtaaaatact
    12481 tagcataaac atatttttac gcccaaattt atctccaaaa tgtgccataa ctataccacc
    12541 taaaggacgt gctaaatatc cagctgcaaa tgctccataa gtatttaata aagcccaaaa
    12601 ttcactcata tctttaggaa aaaatacatt ggctatatat tcagcaaaaa atacaaaaat
    12661 aataaaatca taaaattcta aagttcctcc tagtgaagaa agtcctaaga tcttaatttc
    12721 ctttgttcca aattttaatt ttctcattga ttaattacct taaattttaa aaacattgtt
    12781 tttattatac tacaatcatt tccaaaatat tatctaaaaa atttaaggat aaatatattt
    12841 aattttataa tcactctttt aaaaaccaat ctttattttt tagaagaaaa aatcacaagc
    12901 aaaagttcaa atcaaaccca tataatctca cttaaacaat ctgatgatga atttttaaat
    12961 ttattatttt cttttttagt gccacaaagc gatgaagata agaattttat agaaaaaact
    13021 cgcacaaaaa tcaaaagaaa tgagcataat attgctctga taaaaaatcc aaattttaat
    13081 gctttaatag acacagggtt tttagatact attgacacat taaaagaaaa attgcatacc
    13141 cacaaaaccg attttaaaga tatcactcat attatcttaa cacgcgcgca tcctgatcat
    13201 ataggaactt taatgagcga agaaaatctt tttccaaaag ctcaaatttt aatcgataaa
    13261 aaagaatatg atttttggat caaaagcgat agacaagaaa ttaaaaacac cttgcttaaa
    13321 cttaaaaata tagaatttat taaccactct aaagatttga tctttcaaaa ttcaggcatt
    13381 aaagccatac ctgcttacgg gcatacccca ggtcaaaatg ctatcataat tgatgataaa
    13441 atagtctttt ggggagattt acttcatctt tatgatatac aaatcccaaa acctaaaatc
    13501 gctataaaat ttgatataga tcaaaatgag gctatacaaa caaggaaaaa actacttaaa
    13561 gaatttaaag aaagaaaact caaagttata gggacttatg
//
LOCUS       DARBAC010000042        13554 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.042, whole genome shotgun sequence.
ACCESSION   DARBAC010000042 DARBAC010000000
VERSION     DARBAC010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13554
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.042"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            21..2276
                     /gene="capC"
                     /locus_tag="SB799_000915"
     CDS             21..2276
                     /gene="capC"
                     /locus_tag="SB799_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin CapC"
                     /protein_id="HEG0868164.1"
                     /translation="MKKNASSKILLSLGVATLLYSGAFAAEITFNGDSDLDKYFDINE
                     KDNVATFKNENYKNKQDVTFNISTSAFDDAPEDTKINIDLGNNSLTLKNQMDYQGKTA
                     ALVKNFNVDAKDFKTTDIGLSYFNAGIINANFTMEGSGKDFDLGNIDKNKASSLLIFN
                     GSRENTNDTVNGSLTVNGDFSTTNSAIVSMKSDTFKVNGTATLKEAGLGFLSQSYSNL
                     DVNDFIALRAKDIKTDTLNEDTNAGALILKTASSYINENLLNGDDYAAYLDVTDDKKY
                     GGAFVDYKLSLKNCGGDKCLVINGGATAAAKNLTNQIAVDLEAITRIIDGLDNEQAKK
                     ALQEQKTELEKLQQEAMQNGGKIDDEKYIDLVNKNSNLNLSANDKASILVLRSITEQL
                     GSIGADLASREGVKLALQIKKDTDNTGKSVSNFNSASSAVNTTMNISNDVSIGSRVAM
                     LNNPFGTYASKMNGLKFAALDSDMRPSYVNEYTNSVWANAFGGANIIDGDSGAMYGAT
                     VGVDKQANDNVLWGAYFTYANAKIKDNNLEQKSDNFQLGMYSTINIAPQWELNLKAYA
                     QVSPTKQDNVQVDGAYNSDYTSKFLGLSANAGRVFDLSDNTLFIKPFAGVNYYFSYTP
                     SHTENGAIAKDIDSMKNNSVSVEVGAEFRKYMNENSYIFVTPKIEQFVINSGDDYTAN
                     LAVNNAFFTSVEANNKKKTYGQIIVGGNVDFTNQLSMNLGFGAKQILAGKVDNKNETY
                     LSGQVGLKYKF"
     gene            complement(2418..4502)
                     /locus_tag="SB799_000916"
     CDS             complement(2418..4502)
                     /locus_tag="SB799_000916"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEG0868165.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKIIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            4689..5204
                     /gene="nrfH"
                     /locus_tag="SB799_000917"
     CDS             4689..5204
                     /gene="nrfH"
                     /locus_tag="SB799_000917"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HEG0868166.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            5219..7051
                     /locus_tag="SB799_000918"
     CDS             5219..7051
                     /locus_tag="SB799_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HEG0868167.1"
                     /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQIDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGSHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADTKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            7187..7741
                     /locus_tag="SB799_000919"
     CDS             7187..7741
                     /locus_tag="SB799_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868168.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEYLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQN
                     STNEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            7805..7894
                     /locus_tag="SB799_000920"
     tRNA            7805..7894
                     /locus_tag="SB799_000920"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7839..7841,aa:Ser,seq:gct)
     gene            complement(8103..8384)
                     /locus_tag="SB799_000921"
     CDS             complement(8103..8384)
                     /locus_tag="SB799_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEG0868169.1"
                     /translation="MKIVPTPKFKNELRHIVNFIKLDSSFYAKEFLNDINSICKNLSF
                     MPYKNRKSLSFDNENIRDLIFKGYIIPYLIDKSKNEIVILGIYKSNLWD"
     gene            complement(8385..8606)
                     /locus_tag="SB799_000922"
     CDS             complement(8385..8606)
                     /locus_tag="SB799_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868170.1"
                     /translation="MNLEFSKETQHFLTNYCKDNNLSEKEVLELALSYLEHKIRIDGY
                     KKDIELYKQDKLKTLDFDETFNDIRKDLE"
     gene            complement(8762..9754)
                     /gene="ceuB"
                     /locus_tag="SB799_000923"
     CDS             complement(8762..9754)
                     /gene="ceuB"
                     /locus_tag="SB799_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HEG0868171.1"
                     /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTTKTNTATMKVL
                     PISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVAGVPAKNLP
                     KYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNA
                     NFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKIS
                     AFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVIDRNIIVGNK
                     ERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
     gene            complement(9767..10522)
                     /locus_tag="SB799_000924"
     CDS             complement(9767..10522)
                     /locus_tag="SB799_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868172.1"
                     /translation="MIKLKNITKFYDNKAIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMKLKDYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNANDKIKINEALEYMGLSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQIDGKKICIYF"
     gene            complement(10519..11457)
                     /locus_tag="SB799_000925"
     CDS             complement(10519..11457)
                     /locus_tag="SB799_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEG0868173.1"
                     /translation="MRKKMLILSFLTLGMIGIFILVGLNGFNEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDILILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVANITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISVVINFLGGIYFIYLVLKGNKL"
     gene            complement(11450..12418)
                     /locus_tag="SB799_000926"
     CDS             complement(11450..12418)
                     /locus_tag="SB799_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868174.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDVALNL
                     GISYNGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKVYA"
     gene            complement(12504..13493)
                     /locus_tag="SB799_000927"
     CDS             complement(12504..13493)
                     /locus_tag="SB799_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEG0868175.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALEYEKQGDYKKAMEIYKKLALK
                     NSSVLISQEQNNSSKATQTQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFAYSFNSLGVNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDFPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPESKKDDDNPAILHYMGIFDVNLAYLGDDYFINLMLRNNLK
                     FHDNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
BASE COUNT         4808 a         1972 c         2122 g         4652 t
ORIGIN      
        1 atttattgaa ggagaaactt atgaagaaaa atgcttcgag caagatattg ctaagcttag
       61 gtgtagcaac tttgctttat tcgggtgctt ttgcagcaga gattactttt aatggcgata
      121 gtgatttaga caaatatttt gatatcaatg aaaaagacaa tgttgctact tttaaaaatg
      181 aaaattataa aaacaagcaa gatgtaactt ttaatatcag cacttcagct tttgatgatg
      241 cccctgaaga tactaaaatc aacattgatt taggcaataa ttctttaact ttgaaaaacc
      301 aaatggatta tcaaggcaaa acagctgctt tagtaaaaaa tttcaatgta gatgccaaag
      361 attttaaaac tactgatata ggacttagtt attttaatgc aggaattatt aatgctaatt
      421 ttacaatgga aggttcaggt aaagattttg atcttggcaa tatagataaa aataaagctt
      481 catctttgtt aatttttaat ggtagcagag aaaatactaa cgatactgta aatggcagct
      541 taactgtaaa tggagacttt agcacaacaa atagtgctat tgtttcaatg aaaagcgata
      601 cttttaaagt caatggaaca gcaacgctta aagaagcagg tcttggattt ttatctcaat
      661 cttattctaa tttagatgta aatgatttta ttgctttaag agcgaaagac ataaaaacag
      721 atacacttaa tgaagacact aacgcaggag ctttgatttt aaaaactgca agttcttata
      781 taaatgaaaa cttgctaaat ggcgatgatt atgctgctta tcttgatgtt acagatgata
      841 agaagtatgg aggtgccttt gtggattata aacttagcct taaaaactgt ggtggtgata
      901 aatgcttagt gattaatgga ggtgctactg cagcggctaa aaatttaact aatcaaatcg
      961 cagtagatct tgaagctatc actagaatca tagatggttt agataatgag caagccaaaa
     1021 aagccctaca agaacaaaaa actgaacttg aaaaacttca acaagaagct atgcaaaacg
     1081 gtggcaaaat cgatgatgaa aaatacattg atttagtaaa taaaaattca aatttaaatc
     1141 ttagtgctaa tgataaagct tctattctag tacttcgttc tatcacagaa caattaggaa
     1201 gtataggcgc agatttagca agtagagaag gtgtaaaact agccctacaa atcaaaaaag
     1261 acacagacaa tacaggtaaa tctgtatcta atttcaattc agcttctagt gcagttaata
     1321 ccactatgaa tatttctaat gatgtttcta taggttctcg tgtagcaatg ttaaacaatc
     1381 cttttggaac ttatgcttct aaaatgaatg gccttaaatt tgctgcttta gatagtgata
     1441 tgagaccaag ctatgtaaat gaatatacca atagtgtttg ggctaatgct tttggtggtg
     1501 ctaacattat cgatggagat agtggtgcaa tgtatggtgc taccgtggga gtagataaac
     1561 aagctaatga taatgtttta tggggtgctt attttactta tgcaaatgct aaaatcaaag
     1621 acaataatct agaacaaaaa agcgataact tccaattagg tatgtattct actatcaata
     1681 tagctccgca atgggaactt aatcttaaag cttatgctca agtttctcca actaaacaag
     1741 acaatgttca agtagatggt gcatataact cagattatac aagtaaattc ttaggactta
     1801 gtgctaatgc aggtcgtgta tttgatctta gtgataatac tttatttatt aaaccttttg
     1861 cgggagtaaa ttattatttt agttatactc catctcatac agaaaatggt gctattgcca
     1921 aagatattga ttctatgaaa aataattctg taagtgttga agtgggtgct gaatttagaa
     1981 aatatatgaa tgaaaactct tatatttttg taactccaaa aatagaacaa tttgttatca
     2041 atagtggtga tgattacaca gctaacctag ctgtaaataa tgctttcttt actagtgtag
     2101 aagctaacaa caagaaaaaa acatacggac aaattatcgt agggggtaat gtagatttta
     2161 caaatcaact cagtatgaat cttggctttg gtgctaaaca aatactagca ggtaaagtag
     2221 ataataaaaa tgaaacttac ttaagtggtc aagtaggact taaatataaa ttttaatctt
     2281 aaaaatcatt tctaaatctt tttatagttt agaaatgatt gtttatttct atgggaaatc
     2341 tcctagggct ttatcttaaa gccctttttt ataacaaaca agtaaataag tctttagagt
     2401 aaaaacccta aaaactttta gttttctttg aaaagtttgg aagctaagtg cgttgcacga
     2461 ctttgatctg tatctttttt aagtgtttta taaattttac ttacatattc ttctaaggtt
     2521 tgttgagaat ctatgatttt ttcagaagaa ggaatttttt catactctcc attgttttta
     2581 agctcgtaag ctaaaacatt atcactaagt tgcaagcgta aaaattgagc taatttagct
     2641 ttacttcttt catcatatat aggagtcata agttctaagc gacgctctaa atttcttggc
     2701 atccaatctg cactcgatat aaaataattt ggctcactat gtttaaaata aaatactcta
     2761 gcatgttcta agtattttcc tatgatgctt ctaacgcgta tgtttttgct gtattcttca
     2821 tcaggtttta agcaacaaat tccgcgtatg ataagatcga tttgcactcc ttccatactt
     2881 gcttcataaa gcgcttgtat gatatcacta tccacaagag aattcatttt agctacaatc
     2941 acaccttcat ttttcttgct tgtttcaatg cgtatcattt ctaaaacttt ttctttgatt
     3001 tgatttgggc tcattgaaag agtttgaagg cgacgatttt tactaaagcc cgataagatg
     3061 tgaaaaaagc ttgtcgtatc tcttgcaaat tctgctttgc ttgtaaaata actcacatca
     3121 gtatagattt tagcactgct tgcattataa tttcctgtgc ttaaatgcat ataaaattta
     3181 agtttatctc cttgtttgcg tatgacttga gaaaccttag cgtggacttt aaaacctgta
     3241 atgccataaa taacatgagc tccggcattt tctaaagctt tcgcccaatg aagattattt
     3301 tcttcatcaa agcgtgcttt taattctacc atcacagtta cttgttttcc atcgcttgca
     3361 gcatcaatta aagcttgaac tatattggaa tttttttcaa ctctataaag tgtcattctt
     3421 atggaaatta cttcaggatc tttgcttgct tctttgataa atttataaac tggatcaaaa
     3481 ctttcaaaag gttgtatgat gagtatatct tctttttcta cagcatcaaa aatagataaa
     3541 ttctcatcaa aaggtggtaa agttttaggt gtgtaaagtg ggcttaaaag atgcgtaaag
     3601 gttttatttc ctgcgatttg ccaaaggcta gggagattga gtaaaataga atattcataa
     3661 acatctttat gaaaaatttt catgtgagta ttaagaaatt ctacgatttg ttcatctgca
     3721 tctttttgaa tttgtaatct tacaaaagct ccttttctgc gaagttttaa gccttgttct
     3781 aaaatcatca taaaatcatc agcttcttcc tcttctatta ccatatctgc atttctagtc
     3841 actctaaatg ctgctgaagc taagagttta tagcctggaa aaatttcttc tgcgtgttga
     3901 tggactatac tttctatagg aacataaata tttgcactta cttcataaaa acgaggtaaa
     3961 actcttggaa ttctaatcat tccaaatttt acaagttcag gatgcgcttt atcgcaaatt
     4021 ttaaccgcta gtgaaaaaga taagttgttt aaatgcggaa aagggtgagt agcatcaaca
     4081 gctattggaa caataacagg aaaaatattg gagaaaaaat actcatcaca tttttgtttt
     4141 aaattttcat ctaaattttc ataatgtttt atgaaaagat tttctttttc taattcactt
     4201 gtgatttcat taaaataacg ctccaaaagc tctttttctt gatgtaagta tttgcgtatg
     4261 gcttttaatt gttgtaacgg ggtcatttca tcgctactgc ttgcattaac tccagctgaa
     4321 aaaagttgtt ttaagcctgc gacgcgtatc atataaaatt catctaaatt ggtgcaatat
     4381 atagctataa attttaattt ttctaacaaa ggtaaatttt tagaacattg gtctaaaaca
     4441 cgagaattaa agcgaagcca agaaagttcg cgattgataa acatatcagg acttgtttgc
     4501 attaattttt ccttttttag ttgtatttta tcatttattt tgaaattatt gaataaaagt
     4561 tttaaatttt taggttaatt aagagtaaat atatctttaa aattatatta aattcatcta
     4621 tgttagaatc acaaaattta tttctgggaa attctgtgac attgttgttt cattgaagat
     4681 tttaagaaat gataatttta aggaggaaaa ttttgaagaa aacttcgaat ctttttacta
     4741 tttttcttgt tttgcttttt gttttctttg cggttggctt ttataccttt tataacgcta
     4801 agggcacatc ttatttaagc aatgcaagtg aatcttgtaa taactgccat attatgaatg
     4861 aagtttataa cgaatacatg gcagggccgc actctcaaaa agtcaaaggc gaaccaagag
     4921 caacttgcgt ggattgccat ttgccacata attttgtagc taagtggata gctaaggctc
     4981 aaagtggttt agggcatgct tatgctttta cttttaaact tgatgagttg cctacaaatt
     5041 tgagtgcgac tgaaaaaagc agaaaaatgg tgcaagaaaa ctgcatacgc tgtcatgcag
     5101 attttgctca aacagctatc aatgctacaa caaatccaca tgcagacaag tcattaaatt
     5161 gtgcttcttg tcataaagat gttggacata aacacggaat ttaataagga gaagatgaat
     5221 gaaaaaaaat attttacgct taggtattgt cgttttggtt ttacttatag cgggagtttt
     5281 atggctaaat aatgatatca atcaaaaaaa agaagatgaa gcaaataaaa atgccattgc
     5341 agcaaatgct gatttttctt tgcttagcga tgatgatcca aattttgaaa aatggggtaa
     5401 ggtttttcca gagcaactaa aaatgtattt aacggttgaa aaagaagagc ctaaggctac
     5461 tgaatttggt ggtaatttag cttattcaaa attgattcgc tttcctcaat taaccatact
     5521 ttgggcagga tatcctttta gccttgattt caatgaagaa agagggcatt tttgggttca
     5581 aatagatcaa atgaaaacag caagaaacaa caaagatttt cttaatgccc atggacttgc
     5641 tgcttttaaa ggtcaacccg cagcttgtat gaattgtcat agtggatgga ctccatggct
     5701 tataaaaaat gttgctaaag gagattttac tgcttttaac tctacaaatt attggactat
     5761 gattaaaaat atcccagctg ttgatggtat agtagaaaat tcacctgaac atgcaggctc
     5821 acatggtggt aaaagaatgg gtgtaacttg tgcagattgt cacaatccaa atgatatgag
     5881 tttaagactt actcgtccag cagctattaa tgctttagtt tctagaggat atgaaaaaga
     5941 tccagtacaa ggcgtaaaag ctacaagaga agaaatgaga actttagttt gctctcaatg
     6001 ccatgttgaa tactatttta aaccaacagg ggaaaaagta aaagtaatgg gtgaaactat
     6061 tgtagatgat agttctaaaa aatggtggaa tggaactcag aaaaattatg atgagtatga
     6121 attttggaga gatggcaata aagctaaaga gattgaaacc gatggtatag ttttaacttt
     6181 tccttggagt gaatggaaaa aaggacaacc atttagaatt gaaatgctag atgattatta
     6241 tgataaagtt cgtggagtat ttggagctga ttttactcat aaattaacag gagcgcaaat
     6301 tattaaaatt caacatccag aaagtgaact ttatagtggc ggtgtgcatg ctgcaaatgg
     6361 ggtaagttgc gtggattgtc atatgcctta tgttagagaa ggagctaaaa aggttactca
     6421 acacaatatc acttctcctt taagagatat taactctgct tgtaagtctt gtcataaaca
     6481 aagcgaagat tatttaaaag ctcaagtgct tgacatacaa aatagcgttg cgcatgatca
     6541 aagaactgca gagtacgcaa ttgttagttt gattatggat actaaaaaac tacgcgatga
     6601 gctaggtaat atggaaaaat tccaaagcga tggaaaagct gatacgaaaa aaattagtga
     6661 agagctaaaa gaagttttag aacttcatcg taaagctcaa atgagagcgg attttgttaa
     6721 tgctgaaaac tcaactggtt tccataatcc tcgcgaagct tcaagaatgt tattgcaagc
     6781 tgttgatatg gcaagaatgg gacaaactaa acttgtagaa attgcagcgg caaatggaat
     6841 taaagatttt aaaacttcaa atttaggttt tgaagatatt caaaaattta atccaggaga
     6901 gctttattat aaagtagatg ttaataatca taaagctgga gagcgttact atgcagatga
     6961 aaaagatgtt aatggcaatc ctccaaaaga acttttagag catgataaag agcttgctcc
     7021 ttataattat caagtgattg ataaaaaata attcttaagc cctataatca tagggctttt
     7081 tcttttcttt gttttaaaaa atataaactt tttatttaaa attcactttt gcttcacttt
     7141 gttttgtcaa aatatcacaa attttgataa tcaaaaagga gttaaaatga tcaataaaaa
     7201 taaattgttt agacaggttc atatctatct tagtttgttc tttttgcctt gtgctttgct
     7261 ttttgcttta acgggtatag catatatttt tggtattaat caagatgtgg gcttaaaagt
     7321 tgagcaatat caattgtcaa aagttataga aagtggtaaa gaaagagaag ctttaataga
     7381 gtatttaaaa acaaatggtt taaaagtacc atctaataca aatataatta aaagcaaaga
     7441 taaaggtata acaataggtg gaactcatta tagtgctaat ataactcaaa attctactaa
     7501 tgaatacaat attaccttaa aaacaagatc tttgcttgga gatatgatta tgcttcataa
     7561 agataagggt gcttggtatt tttctgtgct tagcgtaggt tttggtatta ctttatttat
     7621 gctttatatt tcagggctta tgattacttt gtttgcaaat aaaaaagata gaagtaaaca
     7681 atttgcagtt cttggagtag gggttgttgt aactttgctt ttggcttatc ttagcctttg
     7741 atttttccta gctttttaag ctaggtatta tttatttttt tgtataatca cactttactt
     7801 tattggacag atgggtgagc ggctgaaacc acacccctgc taagggtgca gatcttaacg
     7861 ggtctcgagg gttcaaatcc ctctctgtcc gccactaaaa ctttcttgaa aattccaagt
     7921 atttatatat caacattata tatttgaaaa aaaagaataa tctagaacta taataaataa
     7981 atattattct aaaattggaa aataatccat tagaaaataa gatattttgg aattatttaa
     8041 gaaattagat gaaaaagaat gctaatatgg aagtaagaat tctaaaaaaa taaaatataa
     8101 aatcaatccc aaagattact tttatatatg cctaaaatca caatttcatt tttactttta
     8161 tcgataagat aagggataat ataaccttta aaaatcaaat ctcttatatt ttcattatca
     8221 aaagacaaag attttctatt tttataaggc ataaaagaaa gatttttaca aattgaatta
     8281 atatcattaa gaaattcttt agcataaaaa gaactatcta attttataaa attaacaata
     8341 tgcctaagct catttttaaa tttaggagtt ggaacaattt tcatttattc taaatctttt
     8401 ctaatatcat taaaagtttc atcaaaatct aaagtcttta atttatcttg cttgtaaagt
     8461 tctatatcct ttttataacc atcaattctt attttatgtt ctaaataact taaagcaagt
     8521 tctaaaactt ctttttcact taaattgtta tctttacaat aattggttaa aaaatgttga
     8581 gtttcttttg aaaattctaa gttcatttgt tactcctttt taaagattta ttataacata
     8641 aaaacatttt ttatttaaaa aaagggttca aatccctctc tgttcgccac taaaactttc
     8701 ttgaaaatcc caaatatttt attaagtatt aaagcaagag actagccctt gcgaagttat
     8761 attattttac agcgtttttg atttctaaaa tcatagtttt taaagactct agtccatttc
     8821 cacttgctaa ataccagtat tctggatcaa gatagatgat ttttttgttt tgtgctgctt
     8881 tggttttagc gacaagcgca ttatcgagta tgccttgagc ccgttctttg ttgcctacaa
     8941 tgatatttct atcaataaca aaaatataat caggattttt ttctaatata aattcagaat
     9001 tgatactttt accgtgagtg cctactttta tattctcatc taccgcgtta atccctaaaa
     9061 cgtcgtgaat aatcccaaag cgagattgag ggccaaaggc tgaaattttg ttagaatttg
     9121 taagaataat aagagctttt ttatcttcat caactatgct tttggctttt tcaatttcat
     9181 ttttaatatc tgaaattttt tccaaagctt ctttttctaa accataaagt tttgcaacgc
     9241 ttaagacatt gttttcaaaa gagcttaaaa aatttgcatt atcaagacct acaaataaag
     9301 ttggagctat ttcttttaat ttgtcataaa atttactttg gcgtccagaa atgatgataa
     9361 gatcaggttt taaagcatta atggcttcaa aatcaacttg ttgtactcca cctacactag
     9421 gtttgttttt aaattgttgt aggtattttg gtaaattttt agcaggaacg cccgcgactt
     9481 tatcgtttaa ttttaaagca tcaaaagtat ctaaaattcc aagatctaag atcactacct
     9541 tagaaggatt tttagggatt ttattttctc ctaggctatc cttcactaaa aaactatcac
     9601 cctcatcact catgctaata ggcaaaactt tcatcgtagc agtgttggtt tttgttgtag
     9661 aacttgcgtt gttttcattt gaatttgaat tacaagctgt taagattaga cttaaaaaaa
     9721 atgcaaaaaa tgcaaaaact aaagattttt tcatattttc tcctttttaa aaataaatac
     9781 aaattttctt accatcaatt tgacttacag gtatatccat atcataaatt tgttttaaat
     9841 tttcttgatt gatgatttca tcttttgagc cttgttttaa aagcttccca tcttttaagg
     9901 ctatgatttc atcagaataa atcgaagcaa aattaatatc atgtaataca acagctatac
     9961 ttttgttaaa gtctttgact aaatttttca ttagttgcat gatttgtaca ctatgcttca
    10021 tatcaagatt gtttaaaggt tcatcaaaca ttataaattc agtatcttga gcgatgatca
    10081 tggctataaa agctctttgt ttttgtccgc cgcttaatgt atctaaaaat tcatttctta
    10141 agttgctaag ccccatgtat tctaaagctt cattgatttt gattttatcg tttgcattaa
    10201 gtcttccttg agaatgtgga aaacgcccaa aagcgactaa ttcttcaact tttaatctta
    10261 aattgatatt gttttgttgt ttgagaatgg aaattttttg tgctaagatt tgctctttat
    10321 agtcttttaa tttcattcca tcgatataaa tttctccact actaggtttt attaaacgac
    10381 ttgctagagc taaaagagtg gattttccag cgccattggc tcctattata gaagtgattt
    10441 tgcctttatg aaaatcaagg ctaagatctg aaataatggc tttattatca taaaatttgg
    10501 tgatattttt tagtttaatc ataatttatt accctttaat acaagataga taaaatatat
    10561 cccacctaag aaattaataa ctacgcttat agtggcatta taatcaaaaa ctctagagac
    10621 aaaaaatacc cctccaagta aagctaaaat gctaatgagt atgcaagcgc ttagtaaaat
    10681 actatgcttt gcagttttaa atagctcata agtgatattt gccaccaaaa gccccaaaaa
    10741 ggttatagga cctacaagtg cagtgctaat agaagttaaa atagctatga taatcatcaa
    10801 ttgttttgaa attttttgat aatttatccc taaatttatc gctaaatctt tgcctaaatt
    10861 taaaggatct aaaaatttca tatagcgaaa aatccatata aaacttaaaa agctaatgat
    10921 ataagcaaga attaaaatat caaaagcaat attatcaaaa ctagcaaaca ttcttccttg
    10981 tattaccatg aattcatcag gatcgattaa tacttcaaaa aaagagctta aagtgctaaa
    11041 aagtgttcca aaaactaagc ctaaaagcat tataagataa atacttctat cgctactaaa
    11101 taaaatttta taaagtccta gtgaaaaaac caccatacaa actagagtga ttaaaaaatt
    11161 gatatcgttt ttataaacac ttaaattagc tgcaccaaaa gaaaagataa gagcactttg
    11221 aagtaacata tataaagaat ctaatcctat gatagcaggg gttagaattt tgttgttgca
    11281 taaagtttga aaaatcactg ttgaaacagc gatgcaaata gctactataa taatagctgc
    11341 aatttgtaaa aaacgacttt ttaaggcata ctcattaaag ccatttaaac ccacaagtat
    11401 aaaaatccct atcataccaa gtgttaaaaa gctcaaaatc agcatttttt tacgcataaa
    11461 ctttcctttt tagcaaaaga aagataaaga ttaaagatcc taaaacacct gtagtgatac
    11521 ttaaaggcat ttcaaaagga aagatgacaa gtcttgaaat gatatcgcaa acaagtaaaa
    11581 acaaagctcc acaaagtgct atatagataa gattttttct aagattatca cctagataaa
    11641 gagctactaa atttgggata attagcccta aaaaagggat aatcccaacg cttacaatca
    11701 ctaaactagt gataatgctt acaatcatca agcctaaaaa taatatacca ttataagaaa
    11761 ttccaagatt taaagctaca tcttcgccca tgccaactat ggtaatttta tgagctaaaa
    11821 aataagcaag tataaaaagt ggtaaagaaa tgtagagcaa ttcataattt ccctgcataa
    11881 catttgccat actgccttgt agccaacctt ggatattttg tatataattt aaagcatagg
    11941 caaaaaaagt ggttatagca ctaataatac ctccaaacat caagcctatc aaaggtacaa
    12001 aaatcacatc tttgagtttg atttttctta aaatttggat aaatataaaa gaacccaaaa
    12061 gtgcaaatat agaagcaatg atagcttgag tgaaaaaaga cgctccagca aaaaatatta
    12121 aagaaataag tatgccaaat ttagcacaat ccatggtccc tgctgtagtt ggggaaacga
    12181 atttattttg cgtgagttgt tgcatgataa gcccacatat actaagactc attcctgtga
    12241 gtaaaattgc tataagtcta ggaattcttg tgagagttat gatttctagt tgagtggagt
    12301 taagattaag aatatctttt acattgatac tgataactcc tataaataaa cttatcattc
    12361 caaaaaataa aagtaaagct ataagcactt ttaaactcaa tatatgctta aaaaacaaat
    12421 ctttccttat agtaataata attatcaaaa atgaaattgt aatgaaattt gttttaagaa
    12481 atgataaaac tacaaaggat attttagtaa gaaatcaaaa atccagtgga aagtctttgc
    12541 aagtgtttgt tatagtctat aaggctttct ccatagccat taaagtattg taaataccaa
    12601 taaattccgt tattaaaaat atcatatcct agatcaacct gtatagcacc tttgttatcg
    12661 tggaatttaa gattatttct tagcataaga ttgataaaat aatcatcgcc caaatacgct
    12721 aaattcacat caaaaattcc catataatgc aagatagcag gattatcatc atcttttttg
    12781 ctttcaggaa ttctatacca aaggcgtgga acaaataaaa atttattata taaaatagcc
    12841 gtagatacat aaattctatt ccatgagcga gattgtaaat tctcatctcc cttgccattg
    12901 ctttcatgca atatacctac gcgtagattg ttaaaaaatt cataatcttt aagatacaaa
    12961 ggaaaatcta taaaaaattc tggttgatag ttggtttctc taaaaggaga agaatgctca
    13021 taaatttgcc accaagaagt ttgagtatag gctatataat atttttcatc tagccctagt
    13081 aaattttcaa aaagtctttt tttaacacta agttggaatt tcgcctcact cttattatta
    13141 tttactccta aagaattaaa actataagca aaaggtaaaa aataattcat cttataagag
    13201 ctaatgccaa ggggattaaa gctttcattt tcaccaagat aattagccaa agctaagcga
    13261 gaaaagtctt gtttttcttc tttttttata gtgatagaat tttgcgtttg tgttgctttg
    13321 cttgagttat tttgttcttg agaaatcaaa acagatgaat tttttaaagc gagttttttg
    13381 taaatttcca tagctttttt ataatcgcct tgtttttcat actctaaagc ttgttgtaaa
    13441 tcactagccc atataaaaac gcataagctt aaaaataaag caatttttct cattttaact
    13501 cgcttttaaa tttttcatat tcttcataaa aattaagatt taaaaaagca tctt
//
LOCUS       DARBAC010000043        13367 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.043, whole genome shotgun sequence.
ACCESSION   DARBAC010000043 DARBAC010000000
VERSION     DARBAC010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13367
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.043"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1029)
                     /gene="uvrC"
                     /locus_tag="SB799_000928"
     CDS             complement(<1..1029)
                     /gene="uvrC"
                     /locus_tag="SB799_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HEG0868176.1"
                     /translation="MTKENLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKRISREKYLEILDEAMHALLNPSILIKNLEKQMLVLAQ
                     NENYEEAAKVRDQIVTIKDLEVKVEIDIAKLEDFEVFALAFENSMLSTLRFVVQNGKI
                     ISVNSKITPIKNDIQWDKNEIYKQLILENFSMDIPLLANVIYVYEEFEDRMLLEEILS
                     QRFDKKISI"
     gene            complement(1022..1516)
                     /locus_tag="SB799_000929"
     CDS             complement(1022..1516)
                     /locus_tag="SB799_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868177.1"
                     /translation="MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAVNKNKNDEKLSKNSYLELSKGEFKNCFEDEKLFKKFEDLRELIKKG
                     SNLD"
     gene            1655..3190
                     /gene="guaA"
                     /locus_tag="SB799_000930"
     CDS             1655..3190
                     /gene="guaA"
                     /locus_tag="SB799_000930"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEG0868178.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLGLPILGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEVKKDSALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESVWNMGSFAKTQAEKIREEVGSDKV
                     LCAVSGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLANVRDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRPSLELLRKADVILLEELKSTGWYDKTWQAFCVLLNIKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEVLENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            3276..4736
                     /locus_tag="SB799_000931"
     CDS             3276..4736
                     /locus_tag="SB799_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868179.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMIADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRNNRLASLEAQMKTLQSEINLKSNAANADPEKLKA
                     RQERLTKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            4976..6226
                     /gene="purD"
                     /locus_tag="SB799_000932"
     CDS             4976..6226
                     /gene="purD"
                     /locus_tag="SB799_000932"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEG0868180.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHAKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            6223..6675
                     /locus_tag="SB799_000933"
     CDS             6223..6675
                     /locus_tag="SB799_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEG0868181.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIIGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAIRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            6665..8713
                     /locus_tag="SB799_000934"
     CDS             6665..8713
                     /locus_tag="SB799_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEG0868182.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKISAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYILPGAKSGKITQNYLEEYDKENEHTSLYAVQYFYNNEGQK
                     KLKHRISLDYLNKQNEFYELQNLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            8783..10942
                     /locus_tag="SB799_000935"
     CDS             8783..10942
                     /locus_tag="SB799_000935"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEG0868183.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     TYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEILNLEIAKDWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPISIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKYAVLTDIMGLEDH
                     DGDMDFKVAGSKDGITALQMDIKLGGIDQEILKQALYQAKEGRIHILNIMEEAAKEII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIVEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKSKHLNLSENQSLKVKISEIKNGKISVDLCE"
     gene            10939..11421
                     /locus_tag="SB799_000936"
     CDS             10939..11421
                     /locus_tag="SB799_000936"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HEG0868184.1"
                     /translation="MSEFLTHPFEPFFDKDSKILILGSFPSVKSRQDGFYYQHPRNRF
                     WPILETLFDVRLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLSPIL
                     SQTKIQAIFTTGQSAYKFFIKFHPRLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
     gene            complement(11460..12122)
                     /locus_tag="SB799_000937"
     CDS             complement(11460..12122)
                     /locus_tag="SB799_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEG0868185.1"
                     /translation="MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     IN"
     gene            complement(12140..13324)
                     /locus_tag="SB799_000938"
     CDS             complement(12140..13324)
                     /locus_tag="SB799_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868186.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISAVFDVVAFLIACSFVTIYFFIHGRKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     IFGALIFCGICFYLQAVASNVYTLIFVRLLIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
BASE COUNT         4874 a         2210 c         2149 g         4134 t
ORIGIN      
        1 aatactgatt tttttatcaa acctttggct taaaatttct tctaaaagca ttctatcttc
       61 aaattcttca taaacataaa taacatttgc aagcaaagga atatccatgc taaaattttc
      121 taaaatcagt tgcttataaa tttcattttt atcccattgt atatcatttt ttataggagt
      181 aatcttagaa tttacactga taatttttcc attttgcact acaaaacgca aggttgaaag
      241 catggaattt tcaaaagcta aagcaaatac ttcaaaatct tctaattttg caatatctat
      301 ttcaacctta acttctaaat ccttaatcgt tacaatctga tctcttactt tagctgcttc
      361 ttcataattt tcattctgtg ctaaaacaag catttgtttt tctaaatttt ttattaaaat
      421 actaggattt aaaagcgcgt gcatagcctc atctaaaatt tcaaggtatt tttccctgct
      481 aatgcgttta tcacaaggcg caagacaacg agaaatttga taaaaaatac aaggggattt
      541 acaacttgct ttttgcttta aaggatagta taaataaagc gcatctaaaa gctctctagc
      601 gcctttaaaa aaagggccaa aatatttaat tttgcttttt tttactaatt ttctagtgat
      661 ctcaaagcgt ggaaattctt cttcaaaatc cacataaata taaggataag ttttatcatc
      721 tcttagtaaa atattatatt ttggatgcag ttgtttgata aaagaatttt ccaaaatcaa
      781 agcatcggct tctgaattag tagtgataaa ttccaaatgc actgtttctt caatcatttt
      841 ttgaattctt aaagaatttc ttgggtttgc atgtaaattt ggagtaaaag cgaaataaga
      901 tttgacacga tttttaagat ttttagcctt acctacatat aaaagctttc cttcttgatt
      961 aaaatattga tacactccag cactattagg aagagttttt aactcatttt ctaaattctc
     1021 tttagtcaag attagaacct ttttttataa gctctcttaa atcttcaaat ttcttaaata
     1081 atttttcatc ttcaaagcaa tttttaaatt cacccttaga aagctccaaa taagaatttt
     1141 tagagagttt ttcatcattt ttgtttttat ttactgcata agtgtatttt tgagaaaaga
     1201 tttttatatc ttttatatca acaaatccac ttaaaggata tttttgtcca tacgctttta
     1261 tgagaaattt aatataaatt ttgctatcat catgatttaa ttcttgataa gctgctggat
     1321 gtaaggttat tatatttaaa atatgatttt ttacataaat tttagcaatc aaacgttgct
     1381 tagcaagcgg aaaagaactt aaaaaatctt tgcaaaaaaa taaggttttt aaaggcttat
     1441 aatgaggttt atccatcaat tcattaataa cagcactagc gtttttagtc atcttaatat
     1501 tatttctttt tcccataaga tgattttagc atttcttttc ttaattttct tctgtgcttg
     1561 cggatataaa ggcaaccctc aatacacaag ctatgaacaa aatggttcgg taaaaaccat
     1621 taaaaaatac gaacaattac ataggtggta aataatgaaa aaagcagata ttttagtttt
     1681 agactttggc tctcaataca ctcagcttat agcaagacgc ttaagggaac aaggagttta
     1741 tgcagaaatt ttacctttta atgtgagctt agctgatatt aaggcgaaag aaccaaaagg
     1801 tattatttta agcggaggtc cagcaagcgt atatgcaact gatgcgtatt tttgcgataa
     1861 aggtatattt gacttaggtt tacctattct tggaatttgt tatggtatgc agcttatggc
     1921 acatcattac aaagctacag tagcacctgc aggacataaa gaatacggca aagcaaacat
     1981 agaagttaaa aaagatagcg ctttgtttaa aaatcttcca aaaaaacaaa ctgtttggat
     2041 gagtcattct gataaggtag aaaatttacc tcaaggtttt gaagttttag ccacaagtga
     2101 aaatagtcct ttttgtgttt ttggaaatga agataagaaa ttctttgctc tacaatttca
     2161 cccagaagta caacacagtg aatttggcaa aaatatctta aaaaattttg ctaaatacgc
     2221 ttgcaattgt gaaagcgttt ggaatatggg ttcttttgca aaaactcaag cagaaaaaat
     2281 ccgtgaagaa gtaggcagtg ataaagtgct ttgcgcagta agtggcggag tagatagtag
     2341 cgtagttgct gcacttttag ctagcgctat aaaagagcaa gttatagtag tttttgtaga
     2401 caatggactt ttaagaagtg gagaaaaaga acaagttgaa tttatgttta aaaatacctt
     2461 aggtatcgat cttatcagca ttgatgcaag tgaaattttc ctaagtcgct tggctaatgt
     2521 tagagatcct gagcaaaaaa gaaaaatcat aggaaatacc tttatagaag tttttgaaga
     2581 agaagcaaaa aaacataaag atgtaaaata tctcgctcaa ggcacacttt atactgatat
     2641 catagaaagt tctgttgtag gtgcaagcaa aaccattaaa agccatcata atgtaggggg
     2701 cttacctgaa aaaatgaatc ttaaactcat agagccttta aaagaaattt ttaaagatga
     2761 agtgcgtgct ttagggcttg agcttggact tagcaaagaa gtggtttatc gccatccttt
     2821 ccctgggcca gggcttgcta tacgcattat gggagaagta aatcgcccta gcttagaact
     2881 attgcgcaag gctgatgtaa ttttactcga agaacttaaa agtacaggtt ggtatgataa
     2941 aacttggcaa gcattttgcg tgcttttaaa tattaaaagc gttggggtta tgggggataa
     3001 ccgcacttat gataatgcag tttgcatacg cgttgtagat gcaagcgatg gtatgacagc
     3061 tactttctcg catttacctt atgaagtttt agaaaacata agtcgccgta tcatcaatga
     3121 agtagaaggt ataaaccgcg ttgtttatga tatctcaagc aaaccacctg caaccataga
     3181 atgggaatga tccatttttt ctagctctta tttttattat aaaattttta taaaaataag
     3241 gctagaattt attcaagaaa tttcaaggaa gaaatatgca tggaaaaata gctatttata
     3301 tggattctac aggacgtgga accgttacaa actcagcaaa tacctttttt gacttcaatc
     3361 gccaaatttg gaatgataaa aaaagtatgc caagtgttgg tatgcttgtg gaatttagaa
     3421 ctctttctag cgaaaaaaaa gcagaagacg gcaagcccgt tcaaacaagc aaaaccataa
     3481 caggtataaa accttcaaaa tttcaagaat ttaaagaagg ggattttatc actgagcatg
     3541 atttttggaa aactgataat gatgatgaat tagaagactt gcaaaactca agaagaagtg
     3601 cttatataac agaactttat agaacgacag actttgacac tatagaaaaa attcctcttt
     3661 cttttactat acctcaagct atacaaaaat attttgctca tgaaatttta tccgtagaaa
     3721 cacttcaagc caatctacaa gatgaaaagg aaattccctg catacttgat tatcttatac
     3781 ttaaaagatt tttatttaaa gcttatgata ctttaatttt tatggataat agcatagacc
     3841 aaacccaatt tagcgcatta aaaagcatca tgatgcattt agagaattca tacaagcaaa
     3901 tgatagctga tcaaaaacca aatatcacta aaatttttaa cgaaactttt ttatctttgc
     3961 agtgtcatta ccaagcttta gtagccacca tagatacaag aaacaatcgt ctagcctcac
     4021 ttgaagcaca aatgaaaact ttacaatctg aaataaatct taaaagcaat gcggccaatg
     4081 cagaccctga aaaacttaaa gcacgacaag aaagattgac taaactacaa aaagaagcag
     4141 aatactacag aacaacacta aaaagacttg atgctataag ggaagatttt tataagaaaa
     4201 attacaatat tttcgaaaat gcttttaaac tttcacgaga aaagctcttt aaaaaaattg
     4261 tcacaggttt aaatctatgc gcaaccataa tggatgttaa aatttggcac ttatctttaa
     4321 aatcatcagg ggttaaaaat tcttatttta ctatgagtaa tatagaaaat tctttctgtt
     4381 ctctttcttt tgcagaacat tacttaagtc gcttaaataa atccgctcta aatccttttg
     4441 atcaaaaact tttagtgtat attcaaaaaa tcacaaaaga acaaagaaaa aaatttttag
     4501 ttgtcacatc ggatttagat ttattatgca aattaaaaat tgaaaacttt tcacaaaatc
     4561 cgtattattt agtaaaatac gcacctaaaa aagtaaatta tcagtcttta atgcgtgata
     4621 acacctttga tatagtctat attgatgaaa aacatgtttg ggaaaatgtt gccgatatta
     4681 ttttacaagg aaagcatttt gacaaatcag gaaaaaccaa atttaaactg atttaagaca
     4741 tagaaattta agctaaatta agttataatt tccttgccta aacagtttgt ggtatttaaa
     4801 gtgattcaac acatttttat taactgcgat tgtgtgattt accgtgttct gtggcatcgt
     4861 ttgagctttg aaaaaagcga gaagttgcag cctttaaaaa ttacctagcg gttttctttg
     4921 actttttggg gtcaatcttt gttaaacggc tgtttgggtt taaaaggaga tataaatgaa
     4981 aataatgatt ttgggtagtg gcgcaagaga atactctatt gctttagcct taagaagagt
     5041 agacaaaaat ttagagtttt attttgctcc tggaaatggc gctaccgaaa gtcttggaac
     5101 aaatttaaac ctaaaagatc cagtagtttt agcaacctat gcaaaagaaa aaggttttga
     5161 tctttgtata gtaggaagtg aaagtttttt agctgaaggg gttgtagata tttttaaaca
     5221 acaaggactt gctatttttg ggccaagcaa agctgctgca atgcttgaaa cctcaaaatc
     5281 ttttatgaaa agctttctta aaaaataccg catcaaaaca gccaaatttt taaacacaaa
     5341 tgacattgaa aaagcaaaaa attttatata tagtttaacc cctcccatag tagtaaaagc
     5401 tgatggactt tgtgccggaa aaggcgttat tatagctaaa actcatgaag aagctataga
     5461 agaaacagct aaaatgctta gtggagaaag ctttggagat gctggaaaac tcgttgtaat
     5521 tgaagaattt ttagacggtt atgaattaag catttttgca gtatgtgatg gcaatgattt
     5581 tgttttactt cctgcagcac aagatcacaa aaaattactc gataatgatc aagggccaaa
     5641 tactggtgga atgggtgctt acgcccctag ctctttagcg aatgaaagtt tgcttagaaa
     5701 agttcaaaaa gatattattt taccgacttt agcaggtatg aaaaaagaag gagcggaatt
     5761 ttgtggcgtt ttatttatag gcgctatgat cgttggaaat aaaccttatg tattagaatt
     5821 taatgttcgc tttggcgatc ctgaatgtga agttttaatg cctttaatcg aagatccttt
     5881 agagcttatt ttagctgcta ctcaaagacg cttaagacac gcgaaaatca aaatcaaaaa
     5941 agaatttgca gtaggggttg tatgcgcgag tgaaaactat ccttacaaaa gttcaccaaa
     6001 aagtgaaatt actgtaaata acattcctga aaactctcat atttcttatg ctggagtaag
     6061 cctagaagat ggcaaattaa tggctgatgg tggaagagtt ttagtttgcg ttggcacagg
     6121 aaaaagtata gaagaagcgc aaaaaaatgc ttataaactt tgtgataatg taaatttcaa
     6181 aggaaaacaa tacagaaaag acatcgctca tcaggttctt aaatgaaaga aaatttacaa
     6241 gaccgcttag agcgtgaaaa tctaaaaata gcaagttttg gaaaaagagt tctagctttt
     6301 ttaatcgatg atatggttat ttctttgatt gtatttatca ttttttatga tcgtctaatc
     6361 caagcaaaag atttatttga aacgactcaa attataggaa atttttatct tggcttcatc
     6421 ttgcttcatt ttagctatca agcgattttt acttatcttt atggggcaag tttgggaaaa
     6481 atattatgca aaattatcat cttggatgaa aatcttctcg acaaacccaa tctcatccaa
     6541 agttgcatca gatctgccat aagacaagtt agtgctatgg cgtttatgct tgggtttgct
     6601 tgggctttaa gcaatgattt gcgcaaagct tgggaggatt atctagcaag gacaatagta
     6661 gtcgatgtgg cgtaaatttt ccctattgct aggaactagc atagctttaa atgcagcaca
     6721 agttgatatt tacgctcttg atgcaaaaaa agaaggtgat attcttactg caaacaatga
     6781 tgttattatt ttttctgatt tttatttcat cactgccaat aaagcaattt acaatgaaaa
     6841 aaccggagat gttgagcttt ttggcgatgt taacatccta aggggacaaa acgaaagatc
     6901 acattctgat tatgctaaaa tcaacctaaa ttccaatcaa gccgatttta gtaatttttt
     6961 cttttccaat aacaatcttg aagtatggtt tcaaagcaaa acaagccatc taaatgataa
     7021 agtctttgaa agcaaaattt cagcagtttc aagctgcaat gttgaagatc ctgattggga
     7081 aattcgtttt tcaaaaggct ggcttaaccg ggaaaccaat tttgttcatc tttacaatgc
     7141 aagattatat gttaaaaata ccccagtttt ttatctacct tattttggat ttagcgctga
     7201 tactcataga caaagcgggc ttttaatccc aaaaatcgtt ttaaaaagta gcgaaggctt
     7261 atactatgaa caacctattt atatagccac tcaagaaaat tgggatttag aacttgatcc
     7321 acaaattcga acaaaccgtg gttttggact ttattctact ttaagatttc ttgattctcc
     7381 atattcaaca ggagaattaa attttggtgc ttttagggaa aatagctcct attttcacga
     7441 tgaaaatttg aaaaatcaaa cccactatgg aatagaacta aaatactcaa gagatgattt
     7501 aatcaaatct ttactcagtg ataattttca agaaggccta tggatagatg caacctatct
     7561 caacgatgtg gattatttaa atttaggaag tagggattat cgagatctta actcgcttgt
     7621 aacctccaaa atcaattatt ttttagccga tgaaaacaat ttttatggag cttatgcaag
     7681 atattatatc gacacatcta aacttagcaa caatacaacc ttacaagaat atccaagctt
     7741 tcaatatcat agatttttaa ataacctttt tgatgaacgc ttgcgttatt catttgatgc
     7801 ttcatttcat aatttttacc gacctgctgg ttcttatgca aatgagctaa atttagactt
     7861 gcctatctcg tatcacaacg ctttttttgg agacttttta cactttactt ttacagaaag
     7921 attttatgct tcttttgtaa attatagcaa cgatcccgaa agaaaccatg agcattattt
     7981 cagaaacact catgatttta atctctacac cgatctttca aaagcttatg aaaatttctt
     8041 tcatacttta aatttagggg tgaattacat tttaccagga gcaaaatcag gtaaaatcac
     8101 gcaaaattat cttgaagaat acgacaaaga aaacgaacat acaagtcttt atgctgtgca
     8161 atatttctat aacaacgaag gacaaaaaaa actcaaacac agaatttcac ttgactatct
     8221 caataaacaa aatgaattct atgaacttca aaatctttta acttattatt ttaatgaaaa
     8281 catcaatctt aacagcgaag tgctttactc ttatgaacaa agtcgcttta ccaatgtcat
     8341 cagccaaata gaagtcaata caaattcaaa atttaattgg atgttttctc atgcttatca
     8401 aaacgatgag tatggaaaat atagctttat tggcacaaga gcaaattata ttgccacacc
     8461 taattacaat ttatttggtg gaatttggtt tgatactcaa agagctcatg caaacatgtg
     8521 ggaacttggc tatacctacc aaagaaaatg ttggaactat tctttaatgt atagagaaag
     8581 aatcgatcca caactcacaa gtggtggcat cacagctaaa aatcaaagcg gagtttattt
     8641 tattttcaac ttctatcctt taggaggagt aaaatacgat ttctctttag cagaaagtga
     8701 aaacaaaatt taaaaaggat gaaatttgct aaatatttta aaaaatttta cgaatttatt
     8761 atctggtaaa aaaggaaaaa taatgcaata cagcatagaa attaacaaaa atacagaaat
     8821 atttgatata gacaaagtcg ccaaacaagc tgccggtgct gttttaatga gacaaggcaa
     8881 aagcgttgtt ctagctacag ttgcaagaga agaaaaacaa gttgaagaag attttttacc
     8941 tctaaccgtc caatacatcg aaaaagctta tgccgcagga aaaatccctg gtggttatgt
     9001 caaaagagaa accaagccaa gcgatgcaga aaccttaaca gcgcgcatta ttgatagaag
     9061 cttacgccct ctttttccaa aaggctatac ttatccgact caaatcgttg tgatggttct
     9121 ctcagctgat cctaaagtag atttgcaagt aatgagctta aatgccgcaa gtgtggcact
     9181 ttatcttagt gatataccta tgaaagctcc agtatgtggt gtgcgtatag gaaagataga
     9241 tggaaatttc atactcaatc caaacaatga ggaacttcaa aatagcaccc tagatctcta
     9301 tgtagcaggt gtaaaagatg agcttttgat gatagaaatg agagccttac ctgatcaaaa
     9361 agaaaatgaa atctttatcg aagctcctta tgctgatgtt ttaactcaaa ccacttcaca
     9421 aaatatgaat gaacttagtg aagatgaaat tttagaagct ctaaatttag ctcaaaaagc
     9481 tatattaaat ggttcaaatg cttatgaaga agcctttagc aaacacaaaa aaaattctca
     9541 aatcgaacta aaaaatgaga ttgaacatcc tgaaatttta gcttttatag aaaataattt
     9601 ccaaaaacaa atcaaagaag ccatcaatca aatggcaaaa agcgaaagag cgagcgaatt
     9661 aaataaaatc gctaaagaaa ttttaaatct tgaaatcgct aaagactgga gcgaagaaag
     9721 tgtcttaaat accttagcta aagtcaaacg caaacttatt cgtgagcaaa ttttaaatga
     9781 aggcaaaaga gctgatggta gaagtttaaa cgaggttcgt cctatcagta tagaaaccaa
     9841 tatcttgcca aacgctcatg gctcttgtct tttcactcgt ggacaaactc aagctctagt
     9901 tgttgcaacc ttaggcggag aaaacgatgc tcaaatgata gacttgctta cagaaaaaaa
     9961 tcctataagc gaacgcttta tggtaaatta taattttcca ggtttttcag taggcgaagc
    10021 aagtcctatc aaagctccag gaagaagaga actaggacat ggaaatttag ccaaaagagc
    10081 actttatcca agcgtggatg aaaactatcc ttatgtaatc cgcttagtca gtgaaatttt
    10141 agaaagcaat ggctcaagtt ctatggcaac ggtttgtggc ggatctttag ccttaaaagc
    10201 agcaggagtg ccaagcttaa aacttgttgc aggagtagcc atggggctta tctttgaaga
    10261 taacaagtat gctgttttaa cagatatcat gggacttgaa gatcatgatg gggatatgga
    10321 ctttaaagta gcaggaagca aagacggcat tacggctctt caaatggata taaaactagg
    10381 tggaatcgat caagaaatac taaaacaagc tttataccaa gccaaagaag gaagaattca
    10441 cattctaaat atcatggaag aagccgccaa agaaatcata gtcaatgaag aagttttacc
    10501 taaacttgag ctttttagcg ttgatccttc aaaaatcgtt gatatcatag gacaagccgg
    10561 aaaaaccatc aaagaaatcg tagaaaaatt tggcgtttct atagacttag atcgcgaaaa
    10621 aggtgaagta aaaatagcag gtagtcaaaa cgaacaaatc aaagccgcaa aagactacat
    10681 cataaacatc acaagctctc aaaaaggaac taaaaaaggc tctaaagaca aagatatatc
    10741 aggctttgaa cttgggcaag aatttcaagg tattgttaaa aaaatcgctc cttttggagc
    10801 ctttgtggaa cttaaaaatg gtgttgatgg tttattgcat agttcaaaaa gcaagcatct
    10861 taatttaagc gaaaaccaaa gcttaaaagt taaaatcagc gaaattaaaa acggaaaaat
    10921 ttctgtggat ttgtgtgagt gagtgaattt ctaactcatc cttttgagcc tttttttgac
    10981 aaagattcta aaatcttaat tttaggatct tttccttcgg taaaatcaag acaagatggc
    11041 ttttattatc aacacccaag aaatcgtttt tggcctatac tagaaacact ttttgatgta
    11101 agattagaaa atatcacaga acaacaagcc tttttaagaa aaaaacatat cgctctttgg
    11161 gatgtacttc aaagttgcaa gataaaaaat tcagatgata aaactataag ttatgcaaaa
    11221 gccaatgatt taagcccgat cctttctcaa accaaaatcc aagccatttt tactactgga
    11281 caaagtgctt ataaattttt tattaaattc caccctcgct taaaagccat agccctaccc
    11341 tcaacttctc ctgcaaattt aaatttttct tttgaacagc ttttacaaaa ctatgaaata
    11401 atcaaaaaat ttacaaaata acaaactaag cattaccccc aagtaaaaca agaaaaaagc
    11461 tagttaatat ctagcttttg cgtgttatcc ttgaattcaa attccactct cttagctcca
    11521 aaacctttag caatagcttc taaagtatcc ttagcacttt tatgaatttt gctttctaaa
    11581 ttttggataa gatttaaaga caagtcttta acctcatctt tggcttcttt tatgagtttg
    11641 tttttatcac tttcgctaaa actaatcccc gtactattga tagaatcagg cagtaaaaaa
    11701 ggtaaaaatt tagcattttt ttcatcataa aatttcatat ctatgatgct gtgtttgtat
    11761 ctacactctg gcatgatgat cttataagca tcgtccccta aaggcaaaat atcaaagttt
    11821 ttatccctta aatcatacaa gaaagtgatc tcaaattcaa aaatcaaagc aatctgtctt
    11881 tcactcaaag accatcctaa aagatttttc caaattccat taaaagcgct atctttttta
    11941 gtgacaatct ctttactaaa aacttgaaaa acacttaatt ctcctatgga tttaagttgc
    12001 atgatatcgc taaaactttg cgtgcttttt tcttctattt tagggctttt atactgccta
    12061 aaaagcacta caaacaaaag cacaagtaaa atcatcacta aaacaaataa aatcatttcc
    12121 attttaaacc tttctaaatt tataaacctt gatttgaaaa gatatatttt ttctcaaacg
    12181 ccaagaaaat aaaagcatta atgataaaaa tcaaacacac aaaagtaaaa acaaattcca
    12241 cgctaaaatg agaagccata agccctccgc caaaagcacc gcaaaaattt cccaaaaatt
    12301 gacaagtttg attaaaacca aaaatcacac ttaaattttt agcactcaca ctttttttaa
    12361 gcaaggcatt cacacaaggc aaaagccctc caagtcctac acctataagt aaacgcacga
    12421 aaataagcgt ataaacatta cttgctacag cctgcaagta aaagcaaatt ccacaaaata
    12481 tcaaagctcc aaaaataatc ttactaggcc ctatcttatc ggcgattttt ccaagttttg
    12541 gtgcgaaaaa aagattgcta atcccacttg cagccaccac tatacccgcc caaagagcca
    12601 aatttccacc ttgatgaatt tgctcaacat agatacttaa aatcggcatc actccaaaag
    12661 taccaaattg tatcacaaaa gtagtgataa aaagaacgat gataagggtt ttgttttctt
    12721 tcactttttg agtatttttc ttcgcctctt tttgaatttt tctcccatgg atgaaaaaat
    12781 aaatcgtcac aaaagaacaa gcgatcaaaa aagccaccac atcaaaaacc gcactaatgc
    12841 taaaaaattc agccacaaag ccaccaaaca aaggcccaag taaacttcca cttatagaag
    12901 ccgtagaaag agttcctaaa gcataagcca ctttttcttt aggcgctatc acggcgataa
    12961 acacaacagc agcagaagta aaacctgaaa ttatccctgt taaaccccgt acaaaaacca
    13021 cttctaaagc actatgagca aagctaagcc ataaggttaa aacggacatt ccaaaacttg
    13081 cacgaagaag catattttta taaccatact ttgcacccaa aaaagcccac aaaggtgaaa
    13141 aaacagccat aaaaagcgga gtgatcccaa aagcaagtcc tgaataaaac gctatctcgc
    13201 tcgtatcaac atgtcctagt tctttgatat aaaaaggcaa aatcggagcg atttgactaa
    13261 gccccatact tgtggtaaaa acaccaaacc aacacacaag caaagttcta ttgaaatttt
    13321 ccatggattt attgtatgat attttttata atttttaatt aaaactc
//
LOCUS       DARBAC010000044        13294 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.044, whole genome shotgun sequence.
ACCESSION   DARBAC010000044 DARBAC010000000
VERSION     DARBAC010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13294
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.044"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..505)
                     /locus_tag="SB799_000939"
     CDS             complement(<1..505)
                     /locus_tag="SB799_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone via futalosine step 1"
                     /protein_id="HEG0868187.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSRYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPETK"
     gene            complement(511..1137)
                     /gene="upp"
                     /locus_tag="SB799_000940"
     CDS             complement(511..1137)
                     /gene="upp"
                     /locus_tag="SB799_000940"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEG0868188.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEA
                     SKDFSLKEIEISTPIQKTTVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIEACNFLKSQGVKKIKFISIL
                     AAPQGLKKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(1134..2369)
                     /locus_tag="SB799_000941"
     CDS             complement(1134..2369)
                     /locus_tag="SB799_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEG0868189.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSYDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEINVHSAEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFAL
                     ANPIPEVMPEDVVRLRKDAIVGTGRSDYANQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFDEKAYFESLK"
     gene            complement(2371..3762)
                     /locus_tag="SB799_000942"
     CDS             complement(2371..3762)
                     /locus_tag="SB799_000942"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEG0868190.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFKGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVKFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VYGKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFVNENNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVDEC
                     KKRIENFLKVRGK"
     gene            3827..4642
                     /gene="salC"
                     /locus_tag="SB799_000943"
     CDS             3827..4642
                     /gene="salC"
                     /locus_tag="SB799_000943"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HEG0868191.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKTNLKSK
                     NQSYEQFRVNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINTNI
                     YLSNNPQTLENIKNTKKTILKPQNTSLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(4680..6011)
                     /locus_tag="SB799_000944"
     CDS             complement(4680..6011)
                     /locus_tag="SB799_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEG0868192.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(6013..6468)
                     /gene="accB"
                     /locus_tag="SB799_000945"
     CDS             complement(6013..6468)
                     /gene="accB"
                     /locus_tag="SB799_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEG0868193.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            6617..7177
                     /locus_tag="SB799_000946"
     CDS             6617..7177
                     /locus_tag="SB799_000946"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEG0868194.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDNVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            7226..8230
                     /gene="pseB"
                     /locus_tag="SB799_000947"
     CDS             7226..8230
                     /gene="pseB"
                     /locus_tag="SB799_000947"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HEG0868195.1"
                     /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPHLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKLVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            8232..9362
                     /gene="pseC"
                     /locus_tag="SB799_000948"
     CDS             8232..9362
                     /gene="pseC"
                     /locus_tag="SB799_000948"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HEG0868196.1"
                     /translation="MLTYSHQNIDQSDIDALTKALKDEILTGGKKVDEFEEALCEYVG
                     VKHACVLNSATSALHLAYTALGIKEKIVLTTPLTFAATANAALIAGAKVEFIDIKNDG
                     NIDEKKLEARLLKDSKNIGAISVVDFGGNSVEIDEISSLAKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELITKIKLLKSHGIIKKRLWDS
                     DMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIASFYDKEFEKNPYFSTIKIKNY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKLLGEIRLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            9355..10662
                     /locus_tag="SB799_000949"
     CDS             9355..10662
                     /locus_tag="SB799_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HEG0868197.1"
                     /translation="MDKLDFRSQDFNQTGKAMYELACELFPIPRSITGQGFRASLEIL
                     NKTLGGGILKFHSIKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYS
                     EAIDKEIELEELQNHLYSIEEMLDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYI
                     NAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLS
                     LKERKYNYRFVIIPETIGSIVYLSKHLEHLKKHVKAGFVLSCLGDDHAYSLIHTPKEN
                     TLSDKVALHTLKNKENFKTFSFLDRGSDERQYNAPLVNLGIVGVCRTRYLEYEQYHTS
                     KDDLNFISEKGLMGGLQSMQEIILNLEINAVYENTIVCEPNLGKRGLYHTLSTANDIP
                     LACNFLAYCDGENDIIDIANILNMQAYEFKELLEKIKFYGLVK"
     gene            10659..11450
                     /gene="legH"
                     /locus_tag="SB799_000950"
     CDS             10659..11450
                     /gene="legH"
                     /locus_tag="SB799_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase LegH"
                     /protein_id="HEG0868198.1"
                     /translation="MKYFLEHNDKKYSDKDLIDAFYQLGIKRGDILCVHTELFNFGVP
                     LLSRNEFLQTILNCFFEVIGKEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNEYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLAKENGKYMTFGGQGHTL
                     THYAEEQFNVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNN
                     TKNFKKNNFAGDHINIYNAKEYIEILWKKLDINQTILIENYDTIY"
     gene            11481..11711
                     /locus_tag="SB799_000951"
     CDS             11481..11711
                     /locus_tag="SB799_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0868199.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFNKEDLGLLKSQSALLEKIQTLKAEK"
     gene            11708..12601
                     /locus_tag="SB799_000952"
     CDS             11708..12601
                     /locus_tag="SB799_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0868200.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYI
                     QDGISIKEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWIAHIKVRKYFSQYLKNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKMVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKLKTYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            12594..13010
                     /locus_tag="SB799_000953"
     CDS             12594..13010
                     /locus_tag="SB799_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEG0868201.1"
                     /translation="MLNTTLNLPIHHIGVACKNLEKERECFFKLGFYKESEFVDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNITQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            13007..>13294
                     /locus_tag="SB799_000954"
     CDS             13007..>13294
                     /locus_tag="SB799_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0868202.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLKAEFNFSSYDDSLSFDNFKEANLELLWLDLTRYKNNVQNFIE"
BASE COUNT         4636 a         2297 c         1994 g         4367 t
ORIGIN      
        1 tctttgtttc tggaaatttt ttcaaaattt gtttatataa agcttttttt tgcacacaag
       61 aaaatctagc aaaaacaaaa ggcaatcctg ttttttcgtg ccattttgca cataaatcga
      121 tatatctaga aggatctttt agataaagct ttaaagcctt atcacctata attacttttc
      181 catcttgttt taatacttta gctaaagcat ttgaagttgc tgaacttgga tctttggcat
      241 ttgatgtatt tttttctact aaaacactta aaactctttt attagcacaa atacccaaat
      301 ctaaattttt atattttttt ctagcacttt ctatgcttga aatgatagct gcatcaattc
      361 ttctataaaa taaatcttta tttagcttac ttggaactcc ttttttatac tccatacttg
      421 ctttataacc attaggtagg ggatatttct taagatatat atgtaaaggt aaaagattaa
      481 tataatcaat ttttccaaaa atcatctctc ttaaagagtg ttaaacactc tatctcctgc
      541 atctccaagc cctgggataa tataaccttt ttcatttaaa ccttcatcaa tacaagccac
      601 aaaaacttct acatcatcat gcatttggct aaattttttc aaaccttgtg gagcagcaag
      661 tatggatata aattttattt ttttaactcc ttggcttttt aaaaaattac aagcctctat
      721 agcagtccca cctgtagcaa acataggatc tataacaata gcagtgcgtt tttttgcatc
      781 tttgggaagt ttttgaaaat aaaaatccgc ctttaaagtt tcttcatttc tcacaaatcc
      841 caaaaatcca acacttgcat caggaatcat cttaaaaacg ctttcaagca ttcctaatgc
      901 agctcttaaa ataggacaaa tcataatctt ttcatcaagt ttttttactg tagttttttg
      961 tataggtgtt gaaatttcaa tttcttttaa agaaaaatct ttgctcgctt caaaaagcaa
     1021 aaaagatgaa atttcatcga ttaacatacg aaattgaaag ggctttgtct ctttagccct
     1081 taaaattcct aatttatgtt cgatcaatgg atgattgata caatgaatat ttttcatttt
     1141 aagctttcaa aataagcttt ctcatcaaaa tttttcacct tagccacacc atcttttacc
     1201 gcagctgctg ctacagctgt acttactgca gcttttactc tttcatcaaa aggttttggt
     1261 ataacataat ctcttccaaa ttctaaagtg cttaaattat aagctttttt aactgcatca
     1321 cttacaggaa gttttgcaag atctgctaat gctttagcag cagctacttt catattttca
     1381 gtgattttac ttgcacgcac atctaaagcc ccacggaaaa taaaaggaaa acctaaaaca
     1441 ttattgattt gattagcata atcacttctt cctgttccta caatcgcatc ttttctaagt
     1501 ctaactacat cttcaggcat cacttcagga ataggatttg ccaaagcaaa aatcacagga
     1561 tcttttgcca tgcttaaaac catttcatca tcaagaattt ttggcgcact aagccctagg
     1621 aaaacatcag ccccttttaa aacttctttt aaagtctttt ccttagaatc aacagcaaat
     1681 tcaagttttt gaggagttaa atcatttcta tctttagaaa tcactccttt actatctact
     1741 aaaataatat tttcaacccc taaatttcta tacatcttag cacttgctat acctgcggca
     1801 cctgcgccac ttacaaccac cttaatgtct ttaaattttt taccgcttat ctccatagca
     1861 ttcataagcc ctgcagttga aataatagcc gttccatgct gatcatcatg cattacagga
     1921 attcctaaat cttgcaaagc cgcttcgatt tcaaaacatt ttggcgcagc tatatcttct
     1981 aaatttatcc cgcccacagt cggagccaaa gccttgcaaa aatttacaat ctcttccgca
     2041 ctatgaacat taatttctat atcataagca ttgacatttg caaatttttt aaacaaacaa
     2101 gccttacctt ccataacagg ttttgaagcc tgtgctccta tgtttccaag tcctaaaaca
     2161 gcagaaccat cgctaactat agctactaaa ttagccttat ttgtataagt ataagcaagc
     2221 tcattatctt tagcgatttc aaggcaaggt tctgcaactc ctgggctata cgccaaagat
     2281 agatcataac ttgtagccat tggcttactt ggtacaatat caattttccc acctaaatgg
     2341 tattttaaag cttcttcttt taaattcatt ttattttcct ctaactttta aaaaattttc
     2401 tattcttttt ttacactcat caacccctaa aaattctaat acttcaaaaa tactaggact
     2461 taccgcactc cctgttaaag ctatgcgtat aggctgagcc aaatctttta actttgcttc
     2521 ttttttttct aaaaaatcat ttgtaaaatc ttcaaaatct ttacctgttt tttgatcttt
     2581 aagtgtatta gcaaatgcct ggagcaattc taaattattt tcgttaacaa atttttgcac
     2641 tgcattttca tcataatttt gcggtgcatt aactatgctt tttgcaccat tgataatatc
     2701 atgcaaggtt tttgcacgct ctcttaataa atcaagtaaa aatcctgcct ttccataaac
     2761 agataaatca aagccgagat ctttaagctg acggttaatc tcttcaaaag gtaaagtttt
     2821 aatataatga gcattcaacc attcaagctt tttagcatta taacaagatg cgcttttatt
     2881 gatatgataa ggatcaaaaa gttttttcaa atcttctagt gaaaaaacct catcatcacc
     2941 atgactccaa cctaaacgca caagaaaatt aagcaaagct tgaggtaaaa ttcccatttc
     3001 tttgtattcc ataacatcag ttgccccatg tctttttgaa agctttttac catcttctcc
     3061 atgtatcata gccacatgaa aaaatttagg aattttaaaa cccaatgcct cataaagcac
     3121 aatttgttta ggagtatttg aaagatgatc atccccacga atcacatcac ttacccccat
     3181 taaagcatca tcaataacaa cagtaaaatt ataagttgga gttccatcac ttcttgcaat
     3241 gataaaatca tccattatat cctctgcttt aaattttacc tcgcctttaa ccccatcttc
     3301 aaaaacaatc tcgccgcttt gaggtgcttt aatacgcaca acaggttcta taccctgagg
     3361 tggcgtgcct ttaaattctc tatatcttcc atcatatctt gggcgctctt tggcggcttc
     3421 ttgcttggcg cgcaattctt ctaattcttc tttactcata taacaataat acgctttacc
     3481 ttcatctaaa agctttttga catattcttt ataaagatca aaacgctctg attggtaagt
     3541 tacttctcca tcatgttcta aaccgcacca tttaaaagct tcgataattg ctttagtagc
     3601 ttctttggaa tttcttttta aatccgtatc ttcaatacga agtaaaaaat ttccaccatt
     3661 ttttctagcg tataaataat tataaagagc tgttctaagt ccacctatgt gcaaataccc
     3721 tgttgggctt ggagcaaaac gcgttgtaag tttttcgtgc attttttgcc ttttcttaaa
     3781 tttttattga tataatgcga tatttatact taaataaagg tttgaaatga aaaaaatttt
     3841 attaagtttt gcattttttg caagtttagc tagtgcaaat accattaatg ctatagctgt
     3901 agttgtggat aaagagccta tcacaactta tgatatagat caaactatga aagtgcttaa
     3961 aattgataga aataaagctt taggtgtact catcaatgaa aaaatggaaa tttcacaaat
     4021 gaaacaactg ggtattgtag tcaatgatct agagcttgat gatgctataa ataaaatgct
     4081 tgctcaaaac aaaaccactt taaatgcttt caaaacaaat ttaaaatcca aaaatcaaag
     4141 ctatgaacaa tttcgtgtaa attttaaaaa agatttagaa aaaagaaaac tttatgaaaa
     4201 aatcgcaagt atggcaaaaa ctgattttag tgatgatgga gcaaaaaaat ttttcgaaca
     4261 aaataaagat aaattcactt tttatacaca aattaataca aatatttatt tatcaaacaa
     4321 tcctcaaact ttagaaaata tcaaaaatac aaaaaaaaca atccttaaac cacagaatac
     4381 atctttaaac acaagcaatg ccgatccaag acttttaggg cttttatcac aaattcctgt
     4441 tggaggcttt tcccctgttt taaatggaaa aaatggctat gaactctatg aagttaaaag
     4501 caaagatggg gcacaaactc ctgaatatga acaagttaaa aatgaagttt taaacgctta
     4561 tgtaagcgaa caaagacaaa atttcataca ggattatttt gataaactcc gctctaaaat
     4621 caatatagaa tatttaagat aaaaattaca attaaaattt ccctttaatt agggaaattt
     4681 taatgtcttg caagataatt tgtatcgtag ttattattaa taaaatcagg attttccatc
     4741 atagaaagat gaaaatcttt ggttgttttt atcccactta taagcaactc atctaaagct
     4801 actttcattt ttgcaatagc tttattacga tcttctgccc aaactacaag tttgcctatc
     4861 atagaatcat aataaggagg cacgctatag tcttgataac aatgactttc cattctgaca
     4921 ttgcgtcctg cgggtggaat gtatttagta atcttacctg gacttggcaa gaaagttttg
     4981 gaatcttcgg ccgtgattct acattctata gaatgcccat ttaatttaat actttcttga
     5041 gatggtaaag cataaccttc tgctacttta atcatttgtt ctatgatatc aatcccactt
     5101 accatttcac ttacacagtg ttcaacttgc aaacgcgtat tcatttctat aaaataaaaa
     5161 tccaaatttt tatctaccaa aaactcaaaa gttcccgcac cttcatatcc tatagcttta
     5221 gctgccttaa tagcagtttc atgaagtcta gtgcgtgttt tttcatcaag caaaatcgca
     5281 ggggattctt ctataagttt ttgatggcgt ctttgcatag aacaatctct ttcgcccaca
     5341 tgaatcacat tgccaaaact atctcctata acctgcactt ctatatggcg tggattttgt
     5401 atgtattttt ccatatacat agttccatcg ccaaatgctg tcatagcctc gctttcagcc
     5461 gaccaatacg ctttttcaag atctttttca ttttcaacca cacgcatacc acgaccaccg
     5521 ccacctgcag ctgcttttaa aatcacagga taacctattt ctttggcaag ttttttagct
     5581 gcttcagctc ctgccaaagc cccatcgctt cctgggatca caggtacgcc tgctctttgc
     5641 atgacttgtt ttgcttttga tttatcactc attaaattca tagcttccac agaaggacct
     5701 ataaatttga tgttatgttt agcacaaatt tcaacaaaat tttgattttc acttaaaaat
     5761 ccgtatcctg gaaaaatcgc atctgcttca gcaatttcag ctgctgtaat aatagctggg
     5821 atatttaaat agctttcaga acttcttgct ttgcctatac aaatgcttgc atcagcgtat
     5881 tttaaataca aagcatcttt atctgcttca gagtacacac aaattgcttt tttacccatt
     5941 tctttaatcg ttcttaaagc acgcagtgct atttctccac gattagcaat taatatgctt
     6001 ttaatttcca ttttataatt tctccaccgc aaataaaggc attccaaatt ctacaggctg
     6061 accatcagca actaaaattt cagcgatcct acaatcaaat tccgcttcaa tttcattcat
     6121 gattttcatc gcttcgataa tagctatagt atcgcctttt ttaaccgtac tacctacttt
     6181 tacaaaaggt gctgcacctg gacttggagc ttgatagaaa gttcctacca tagggctgtt
     6241 tatacttggt ttgtttgatt ttacactttg actaggttga gcttcgttta caacgcttac
     6301 attgataggt tgtggagctg gaactggagg acaaacaggg gctggaacat cgcagcacat
     6361 atctctttca agttctattt caaaaccatc ttgttctttg atcttaattt tactaatatt
     6421 tgcttcagca aaaaggttta ctaactcttt aatttcttct tttgtcataa aattctccta
     6481 caaaatttaa gaacttaacc ttgtattata taaaaaaact tgaaatttaa ctttaaaaaa
     6541 gaaaaaaatc ataaaaaata tagatttttt aggttataat ccttacaaac aattacaaat
     6601 attaaaaagg ttaaaaatgg gcttaaaagc ggataattgg ataagaaaaa tggcattaga
     6661 acacaagatg atcgaaccat tttgcgaagc aaatatagga aaaggtgtgg taagctatgg
     6721 actttcaagc tatggttatg atatacgtgt agggcgtgag tttaaaattt ttaccaatgt
     6781 taattcaact gtagtggatc caaaaaattt cgtagaagaa aatgtagtag attttgaagg
     6841 cgatgtatgt atagttcctg caaattcttt tgccctagcc agaactatag agtattttaa
     6901 aatgcctgat aatgtcttag ctatttgtct tggcaaaagc acttatgcaa gatgtggcat
     6961 catcgtcaat gttacccctt ttgaaccagg ttttgaagga catatcacta tagaaatttc
     7021 aaatactacg cctttacctg caaaaattta tgccaatgaa ggtatagcgc aagtgttgtt
     7081 tttgcaaggc gatgaaaaat gtgacaccac ttataaagat aaaaaaggca agtatcaagc
     7141 ccaaactggc attaccttac caagaatttt aaaataggaa cacttattgc tttaatttaa
     7201 aaaaacttaa gcaaaggaag gcaaaatgtt taacaaaaaa aatatcttaa tcacgggcgg
     7261 aacaggctct tttggaaaaa cttatactaa ggttttgcta gaaaactata aacctaataa
     7321 gattatcatt tattctcgtg atgagctcaa acaatttgaa atggcaagcg tttttaatgc
     7381 tccttgtatg cgttatttca taggagatgt aagagataaa gagcgtttaa gtgctgctat
     7441 gcgtgatgtg gattttgtta tacatgctgc tgcaatgaag catgtaccta ttgctgaata
     7501 taaccctatg gaatgtataa aaacaaacat tcacggtgcg caaaatgtca tcgacgcttg
     7561 ttttgaaaat ggagttaaaa aatgtatcgc tcttagcaca gacaaggctt gcaatcctgt
     7621 aaatttatac ggcgcaacca aacttgcaag cgacaagctt tttgtcgctg caaacaatat
     7681 agcaggtaac aaacaaacac gctttggtgt tacaagatat ggcaatgttg taggttcaag
     7741 aggatcggta gtacctttct ttaaaaaact catcagcgaa ggagctaaag aacttcctat
     7801 caccgataca agaatgactc gtttttggat cagccttgaa gatggagtga aatttgtact
     7861 gagcaatttt gaaagaatgc acggaggaga aattttcatc cctaaaattc cttcgatgaa
     7921 aatcaccgat ctagctcatg ctttagctcc tcatttaagt cataaaatca taggtatcag
     7981 agcaggagaa aaactacatg aaatcatgat ttcaagcgat gatagtcatt taacctatga
     8041 atttgaaaac tactatgcca taagccctag cattaaactt gtagataaag ataatgactt
     8101 tagtatcaat gccctaggcg aaaaaggaca aaaggtaaaa gatggttttt cttatagttc
     8161 ggataataat cctttatggg caagcgaaaa agaactttta gaaatcatca atcacaccga
     8221 aggtttttaa aatgcttact tattctcatc aaaacatcga tcaaagcgat atagatgcgc
     8281 ttacaaaagc tttaaaagat gaaattttaa cagggggtaa aaaggtagat gaatttgaag
     8341 aagccctttg tgaatatgtg ggcgtaaaac acgcttgtgt attaaactca gccacttcag
     8401 cccttcatct tgcctataca gcactaggca tcaaagaaaa aatcgtttta accactcctt
     8461 taaccttcgc tgctacggct aatgcagcct taatagctgg agctaaggta gagtttatcg
     8521 acattaaaaa cgatggcaat attgatgaaa aaaaactaga agcaagactt ttaaaagata
     8581 gtaaaaatat aggagctatt agcgtggtgg attttggggg aaatagcgtt gaaatagatg
     8641 aaatttcaag ccttgctaaa aaatacaata tccctttaat cgatgatgca agccatgctt
     8701 taggtgcctt atataaaagt gaaaaagtag gaaaaaaagc cgatctttct atcttttctt
     8761 ttcatcctgt taaacccatc actacttttg aaggcggcgc tgtggtgagt gataatgaag
     8821 agcttatcac caaaatcaag cttttaaaaa gccatggtat aattaaaaaa aggctttggg
     8881 atagcgatat ggtagaactt ggctataatt accgcttaag cgatgttgct tgtgctttag
     8941 ggataaacca gcttaaaaaa ctcgatcaca atcttgaaaa aagagaagaa attgcaagtt
     9001 tttatgataa agaatttgaa aaaaatcctt atttttccac gataaaaatc aaaaattata
     9061 aaaaaagctc aagacattta taccctatct tgctttttcc tgaattttat tgtcaaaaag
     9121 aagaactttt tgaaagctta cttcatgcag gaattggcgt acaggtacat tataaaccaa
     9181 cttatgagtt tagtttttat aaaaaactct taggagaaat cagactccaa aatgcggata
     9241 atttttacaa agccgagctt agcatacctt gtcatcaaga aatgaatcta aaagatgcaa
     9301 aatttgtaaa agatacttta tttagcattc ttgaaaaagt taaaaaggga tattgtggat
     9361 aagctagact ttagaagtca agattttaac caaactggaa aggctatgta tgaactagct
     9421 tgtgaacttt ttcctatccc taggagtatc acagggcaag gttttagagc tagcttagaa
     9481 attttaaata aaactctggg ggggggtata ctcaaatttc actctatcaa aagtggcaca
     9541 aaggtttttg actggatagt ccctgatgaa tggaacgcta aagaagccta tatcatcact
     9601 ccagaaggag aaaaaatttg tgattttaaa aagcataatt tacaccttct aaattatagc
     9661 gaagctatcg ataaagaaat cgaacttgaa gaacttcaaa atcatcttta ctccatagaa
     9721 gaaatgctcg atgctattcc ttatgtaacg agttattaca aaaggcgttg gggattttgt
     9781 ctcacgcata atgaaagaaa aaaactcaaa aaaggcaaat acaaagtcta tatcaatgcg
     9841 aaacatgatg aaaatggggt tttggattat gctgatttta tcctacctag tacgcaaaat
     9901 tcaaaagatg aaattttaat ttcaacctat ctttgtcatc cttccatggc aaataatgag
     9961 cttagtggtc ctgtggtggc tattttccta gcaaaatggc ttttgagttt aaaagaaaga
    10021 aagtataatt accgctttgt catcattcct gaaaccatag gctctatagt ctatcttagc
    10081 aaacatttag agcatttaaa aaaacatgtt aaagcaggct ttgtgctttc ttgcttaggt
    10141 gatgatcatg cttactcact catacacaca cccaaagaaa acactctaag cgataaagtt
    10201 gccttgcata cgcttaaaaa taaagaaaat ttcaaaactt ttagtttttt agatcgtgga
    10261 agcgatgaaa gacaatacaa tgctccgctt gtaaatcttg gcatagtagg agtatgtcgc
    10321 acaagatact tagaatacga acaataccac actagcaaag atgatctcaa ttttatctct
    10381 gaaaaaggct taatgggtgg acttcaaagc atgcaagaaa taattttaaa tctagaaatc
    10441 aacgccgtat atgaaaacac catagtatgc gaacccaatc ttggcaaaag agggctatat
    10501 cataccctta gcactgctaa tgacattcct ttggcttgta attttctagc ttactgcgat
    10561 ggagagaatg atatcatcga tatagccaat atcttaaata tgcaagctta tgaatttaaa
    10621 gaacttttgg aaaaaataaa attttatgga ctagtaaaat gaaatatttt ttagaacaca
    10681 atgacaaaaa atactccgat aaagatttaa tagatgcttt ttatcaacta ggtataaaaa
    10741 ggggtgatat tttatgcgta catacagaac tttttaactt tggcgtgcct ttgctttcta
    10801 gaaatgaatt tttacagact atactcaatt gcttttttga agttataggc aaagaaggca
    10861 ctttgatcat gccaaccttt acttatagtt tttgcaaaaa tgaagtttat gacaaaataa
    10921 attccaaaac aaaaatggga gcattaaatg aatattttcg caaacaaaca ggagtaaaac
    10981 gcacaaacga tcctatattt tcttttgcta taaaaggagc aaaagaagaa ttatttttaa
    11041 aagatacaac aagttgtttt ggggaaaatt gtgtttatga agttttagcc aaagagaatg
    11101 gaaaatatat gacatttgga ggccaaggac atacactaac acattatgca gaagaacaat
    11161 ttaatgtatt ttacagatat cataaaattt tctctggaat tttaattgat gaaaacaata
    11221 tatcatacaa taaaaccatt agttattatg ttagaaaact tgacatatct tctgagccca
    11281 atttaattaa cattatcaat attgttaata atactaaaaa ttttaaaaaa aacaattttg
    11341 caggagatca tataaatatt tacaacgcta aagaatatat agaaatttta tggaaaaaat
    11401 tagatataaa ccaaacaatt ctaatagaaa attatgatac aatatattaa ttttcaacat
    11461 tctcaagaaa gtggtataca atggaaaaac aattttatga aattttagaa aatatacttg
    11521 aaaccaaagt agatgaaaat acaaatttaa gcatggaaaa ctgcaagaac tggacttctt
    11581 tagctcatat tgatatcatc atgagtttag aagaagaatt tgaaatcaaa tttaacaaag
    11641 aagatttagg tctcttaaaa tctcaaagcg ctttactaga aaaaattcaa accctaaagg
    11701 cagaaaaatg aaagaaaata ttgaaaaatt atttcaagcc atcgctcaaa aaaatcctat
    11761 ccattctaaa tatcttaaaa aaattgaatt ttcacaagaa gacgaagaag aatttgataa
    11821 attaatttct tattatattc aagatggcat cagtataaaa gaacaatgcg attgttattt
    11881 attgatcctt aacgatactt tagaagaaac aaaatttttc atagaaaatg gggcttatcg
    11941 ttattctagc tttgatgaag ttaaggataa agtttatttt aatgaaagct atatgaaaca
    12001 atacatgata ggcttagctc tttcttcttt tgtttggata gctcatatta aagtgagaaa
    12061 gtatttttca caatatttaa aaaattttac tccaaaaaca acttattttg aaataggccc
    12121 tggccatgga gaatattttg caagagcagt taaaagtggt aaattttccg cattttatgg
    12181 acttgatatc tctccaacaa gttgcgaact tactcaaaaa atggtaaaac aacaagtagg
    12241 gggattgatt acaaaatgtg attttttatg tcaagatttt tttacttatg attttgataa
    12301 aaaagctgat ttgatagtga ttggagaagt gctagaacac gtagaaaaac ctcttgaatt
    12361 ccttaaaaga tctaaagagc ttcttagcga tggaggggaa atttttgcaa ctattcctat
    12421 caatgctcct gctattgatc atatttattt attttcccat cctgatgaag ttaaagattt
    12481 gatagaaaaa tcaggcttaa agcttaagac ttatgaatgt tttatggcaa atgattatag
    12541 tttagaaaaa gcattgaaat ttaaaaatgc tatcactatg gcagtagttt taaatgctta
    12601 atacaacact caatttaccc attcatcata taggtgtggc ttgtaaaaat ttagaaaaag
    12661 aaagggaatg tttttttaaa ctaggttttt ataaagaatc agaatttgta gatgaaaaac
    12721 aaggggtaag aggtgaattt atcattcctt gtaatgaagc atttccacag tatagatttg
    12781 aacttttgca aaatttaaac gataaaggcc cactagatag ctatttgaaa aataatacca
    12841 aaatgtatca tttagcctat gaaagtaaaa acatcaccca agatttaatt cttttggaac
    12901 aacaaggagg catttgcatt gttcctatta tgcaagcaag ctattttgct aaactttgtt
    12961 ttatcatgat gccaaatagg cttttaatcg aacttgtgga gctaaaatga atcttttttc
    13021 accccattta aaacgcaatg agcttataaa attcgccaaa gaattagact ttagcaaaag
    13081 tcaagatctt cttattaatg tccatagaaa tcatgctttt gaaggagtgc aaagtatcat
    13141 tgctcctttt ttacattttg ctaatttaaa agctgagttt aatttcagct cttatgatga
    13201 tagcttgagt tttgataatt ttaaagaagc taatttagaa cttttatggc tggatttaac
    13261 ccgctataaa aataatgtgc aaaattttat agaa
//
LOCUS       DARBAC010000045        13078 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.045, whole genome shotgun sequence.
ACCESSION   DARBAC010000045 DARBAC010000000
VERSION     DARBAC010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13078
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.045"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            10..702
                     /locus_tag="SB799_000955"
     CDS             10..702
                     /locus_tag="SB799_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HEG0868203.1"
                     /translation="MEWLLLASIPLIVLGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
     gene            689..1642
                     /locus_tag="SB799_000956"
     CDS             689..1642
                     /locus_tag="SB799_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HEG0868204.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            1652..2656
                     /locus_tag="SB799_000957"
     CDS             1652..2656
                     /locus_tag="SB799_000957"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HEG0868205.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLALEINLLAKENDKAKIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLPKNDFVKFFKVYLPNLEAKEPVTLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNAIEHFDKAIAHIEDDYLGSHWLGSFALLAMDVDIL
                     "
     gene            2775..4067
                     /locus_tag="SB799_000958"
     CDS             2775..4067
                     /locus_tag="SB799_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEG0868206.1"
                     /translation="MIMVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFMTSQSGIIF
                     RGLMENSGIEANEAFVNSSIIFAFTIILPIVVLSFFVFNAFKNNIKISVISKPDSFDY
                     KQKTTLILMFMMIVVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLA
                     DEKQVVALIPWGTLIMICGVGMLISIAVEAGVIKLFSDLVENEINVIFIPLIMCAIAA
                     FMSLFSSTLGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKYKEKLFKDLLIKAVPIGFIAAILATIIMSFIL"
     gene            4078..4875
                     /locus_tag="SB799_000959"
     CDS             4078..4875
                     /locus_tag="SB799_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0868207.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYGFDK
                     GVLVQPSFLGVDNEFLLQSIEKDENIKAIVVVDEGIKFDELKKLKERKACGVRLNLIG
                     KELPNFKTMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVKNLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYVNNEQAVKFAKKIYEILKEYFPLSNFV
                     FGSDWPHTNFEANVNFSSALAAFNEVVVSKKEQEQILGDNACALFDF"
     gene            complement(4872..5957)
                     /locus_tag="SB799_000960"
     CDS             complement(4872..5957)
                     /locus_tag="SB799_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEG0868208.1"
                     /translation="MNKIEMLKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGLSVFF
                     GKLNYGLIAMIGALSFLYVPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFI
                     PIGLVAMGSSILIRYYNIGAPGYFFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNALPSEIPPREYICFDAVFVDSLIMGSFVAFSIFIGTFLELER
                     SYWIAISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHDIELVLLMMSL
                     FFIGQFLVNRNYALAMIFFTPYATYLSKAANFMSENADTLILARLIDVVIGSILGLLG
                     GFVIYKPYLRVHFERIAKYIFRIKRKA"
     gene            complement(5954..7186)
                     /locus_tag="SB799_000961"
     CDS             complement(5954..7186)
                     /locus_tag="SB799_000961"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEG0868209.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEA
                     NKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAHIEDPIGKISKGWKNYAGLNIQ
                     KISIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLK
                     EFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIRQDKGLC
                     HAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVK
                     IHAHENALAYFNNSNLEVFKADENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHS
                     ETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGV
                     EDICTYKYIISGEGQIRE"
     gene            7257..8192
                     /locus_tag="SB799_000962"
     CDS             7257..8192
                     /locus_tag="SB799_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEG0868210.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLANEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            8373..9701
                     /locus_tag="SB799_000963"
     CDS             8373..9701
                     /locus_tag="SB799_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEG0868211.1"
                     /translation="MSSIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFIMMSFALADMIAIGSAVQISMYLGLGKKNLARKIFSSSMLIIFII
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMAKECMFVFALFAPFTMLSFALDNYLRICGK
                     TAYSMVMNVIIALSNIVLDFIFIVELGWGLFSAALATCLGLVLGGIFGIFPFLFQNLE
                     LKISSLYMNLKIFKNILYNGSSEFFGNISGSLYSIFANFVLLKISDTQAVAAFSIVLY
                     IDSFIIMLIIAMGDAMQPALSYNYAKKDFSRIKAIIKVVFFAGGFLSLFSIVLILIFG
                     ENLITLFTKENNQEFKTFAYTALMLFAFNYFFAWFNVLSGSFLTAFNKASFSLVLSLA
                     QNLFIPLFFLLFLSYFIGLNGVWLSPFFAEFCVLILAWIFLKRIFKDLSL"
     gene            complement(9749..10678)
                     /locus_tag="SB799_000964"
     CDS             complement(9749..10678)
                     /locus_tag="SB799_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HEG0868212.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSYNADNSDSSFIPFIGVELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYATGNREETDVDRYGFKISQLYESDFGKFTTSY
                     LFSKNKYDKDTIAQSSLKREGYYHEFELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGTNLAFANDYIFTPNLNLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIVLTGIGYKF"
     gene            10832..12208
                     /locus_tag="SB799_000965"
     CDS             10832..12208
                     /locus_tag="SB799_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEG0868213.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVIACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELREKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKILRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
     gene            12268..12870
                     /locus_tag="SB799_000966"
     CDS             12268..12870
                     /locus_tag="SB799_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868214.1"
                     /translation="MFYTFFVILKQGEKMLKQIAFGGIALTATGYGIKKLYEKLSKPE
                     RKFDTHAIVPSCKDMINTEEYKLKRELEVEQKKNQIQEFLCECMECYSGFSKYFNSKE
                     FLEFEQNFTSKNNHKTEFLLSSYKDQMIKVIDYAKKFECLSAFLETQSEKNDLAVVKM
                     ISESMERKTQRFYLQTKFQTFPQYIFPSVWSSPMWNKQWE"
     gene            12861..13067
                     /locus_tag="SB799_000967"
     CDS             12861..13067
                     /locus_tag="SB799_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868215.1"
                     /translation="MGIILGILSLIAGFVAIVLMCSLYFIVFMVFVGMAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
BASE COUNT         4322 a         1713 c         2245 g         4798 t
ORIGIN      
        1 agatggttga tggaatggtt acttcttgct tctatacctt tgattgtttt aggttttgct
       61 ttaaagatta accccttttt agtggtaact tcagttggaa tttatgctgg acttgtttca
      121 ggttttgatt ttgttaaggt tgttagtgat ataggaaaat cttttgtaga taatcgctat
      181 gttgctataa tttggcttat tttaccttta cttgctgttt tggaacgcaa aggcttaaga
      241 gagcaggcta aaaatttaat atccaaaata aaagttgcca gtacaggacg aattttaatg
      301 tgttattttg tttttagaca agttactgca gctttagggc ttttatcttt aggcggacat
      361 gcacagatga taagaccttt aatagcccct atggcagaag ctgcagctaa gcttaaattt
      421 aaaaacttaa cacataaaga tagtcaaaaa atcaaagctt tttctgcggg aacggataat
      481 gttgctgtat tttttggaga ggatattttt atagccgtgc attctatttt atttattaaa
      541 gctttttatg agagcaatgg tattattgtt gagccattgc atttatcagt ttgggctata
      601 ccaactggaa ttttggcttt aattatccat tgttctagac tttatttatt tgataaaaga
      661 ttagaaaaaa cttataaagg gttgagtgat gataagtctt gatttgcttt attatattgt
      721 aggaatttta tttttagttt ttggaatttt aagtttttct aatcaagcta aagatataaa
      781 atcaagaata agcggcgggg tattctggat aagttatagt tttacttttt tactagcagg
      841 agttttgcct cattttgtga tgggttgtat agtgatttta ctagcactta tagcaggatt
      901 taatttatta aaaccagcaa agattgaagt tagtaaagaa gaaaaagaat acgagataaa
      961 acatgcaaat atttataaaa ataaactttt tattcctgct ttaatggttc ctttgattac
     1021 acttattggg acttttttat ttccctattt gagttttttt gaaaataaaa atgctacatt
     1081 gatggctttg attataggta taattatttc ttcagtggtt gcttgtttta tgtttaaggc
     1141 ttctcctaaa agagccgtta aggatgcagc acatactatg gatcacatta gttgggcggc
     1201 gcttttaccg caaattttgg ctacacttgg agtagttttt gtttctacgg gaatgggcga
     1261 tcaagtatct aaacttttat ctagttatat tagtttagat aatgctttta ttgcagtagc
     1321 tgtgtattgt attgctatgg cgctttttac tatagtaatg ggtaatgctt ttgcagcttt
     1381 tcctgtgatt actgctgcta ttgctttgcc gattttaatc atacaaatgc atgcaaatcc
     1441 tgctattata ggagcgattg gaatgcttag tggattttgc ggaactttaa tgacgcctat
     1501 ggctgcaaat tttaatatag ttcctgcggc acttttaaat ttagatgata aaaatggcgt
     1561 aattaaagcc cagtttatgt caggacttgt tttgcttgta gctaatatct ttttaatgta
     1621 ttttttagct tttagatttt aaggagaaac aatggaaaaa tttataaaac aatttagctt
     1681 tattgcacta gaaaatattt ttagagaatt gccaaataaa atcacacatt cttttaatga
     1741 tatcaatgat attaaaccgc caaaacttat gtatcctata ttttatggtt cttatgattg
     1801 gcattctagc gtgcattctc actggctttt ggtgaaaatt ttaaaagatt tttctcattt
     1861 tgccccaaag gatgaaatca tcaaagcctt agattctcaa tttagcaaag aaaaagcaga
     1921 aggagagctt aagtatcttc aaaaccctgc gcacaaaggt tttgaaagac cttatggatg
     1981 gggatggttt ttaaaactgg ctttggagat aaatttactt gctaaagaaa atgacaaagc
     2041 taaaatttgg gctaaaaatt tagaaggcat agctgatttt tttgttaaag aatttaagga
     2101 gtttttgcct aagatggatt atcctatacg agttggaacc cattttaata gctcttttgc
     2161 tttgtatttt gctttagagt atgcaagatt taaaaaagat caagaattag agtattgcat
     2221 catccaaagt gctaaaaagt ggtttttaaa tgataaaaat atgcaagctt tagagccttg
     2281 tggagatgag tttttatctc ctgttttgat ggaagcggtg cttttaagtg ctgttttacc
     2341 taaaaatgat tttgtaaaat tttttaaagt atatttgcca aatttagaag caaaagagcc
     2401 tgtaacttta tttacccctg tgagtgtgag tgataggagc gatggtaaaa tagcacatct
     2461 agatgggcta aatttaagtc gtgcttggtg ttttaaaata ctttcaaatt tttgcgatga
     2521 aaatttaaaa attcttttaa gaaataatgc tatagagcat tttgataaag ccatagctca
     2581 tatagaagat gattatcttg ggtcgcattg gttaggaagc tttgctttgc ttgctatgga
     2641 tgtggatatt ttataaaaaa tttcataaga tgagtagatt tgttactaaa tagatatttt
     2701 ttaaatttag attttgtttt tatgctttga aaaatatatt ttttgatatt ataagcccta
     2761 taatatttta aaggatgata atggtttttt taatcatctc tagtattata gtggctatta
     2821 ttttgggcta tattactaga cataatgttg gaatttttgc tatgattttt gcttatatta
     2881 taggagcttt ttttatggat ttagctccta aaaaaatcat agctttttgg cctatttcta
     2941 tattttttgt tatttttgct gtttcattgt tttataattt tgcaaccgta aatggaactc
     3001 ttgaaaaatt agctggacat ttgatgtatc gttttgctaa tcatccttat ttgcttcctt
     3061 ttgttatttt tgtggttagt gctattatag ctgctttagg agcaggtttt tatacggttt
     3121 tagcttttat ggcaccactt acttttttac tttgcgataa aatcggttta agcaaaattg
     3181 ctggagctat ggctataaac tatggtgctt tgggaggagc aaattttatg acttctcaaa
     3241 gtgggattat ttttcgagga ttgatggaaa attcaggcat tgaagcaaat gaagcttttg
     3301 taaattctag tattattttt gcttttacta taattttgcc tattgtggta ttatcttttt
     3361 ttgtgtttaa tgcttttaaa aataatataa aaatcagtgt tatttcaaaa cctgattcat
     3421 ttgattataa acaaaaaact actttaattc ttatgtttat gatgattgtt gttgttttaa
     3481 tctttcctgt gctaaatatt atttttccac ataatgagac aattagttat tttaataaaa
     3541 aaatagatat agctatgata gccatgattt ttgttgccat tgctttattt ttaaaattgg
     3601 ccgatgagaa acaagttgtt gctttaattc cttggggaac cttgataatg atttgtggag
     3661 tagggatgtt aattagcata gcggttgaag caggggttat aaaattattt tcagatcttg
     3721 tagaaaatga gatcaatgtg atttttattc cgttaataat gtgtgctatt gcagctttta
     3781 tgtcgctttt ttcaagcact ttgggcgtgg ttactccagc gctttttcct atagttccaa
     3841 gcattgctgc aagtagtgga ttaagcgagg cattgctttt ttcttgtatt gttgtagggg
     3901 ctcaagcttc tgctatttct cctttttctt ctggaggaag tttaatttta ggatcttgtc
     3961 ctgacaaata taaggaaaaa ttatttaaag atttacttat taaagctgtg cctataggat
     4021 ttatagcggc gattttagct actattataa tgagttttat tttataagga taatttaatg
     4081 aagattgata ctcatgcaca tatatttttg aaaaagttaa atacggttgc aaatgcaaga
     4141 tataagcctg attatgatgc tagttttaaa gattataaag caaatttaga tcattatggt
     4201 tttgataaag gggttttagt tcagccaagt tttttaggtg ttgacaatga atttttgctt
     4261 cagagtatcg aaaaagatga aaatataaaa gctatagttg tggttgatga aggtattaaa
     4321 tttgatgagc ttaaaaaact aaaagaaaga aaagcttgtg gagttagatt aaatttaatt
     4381 ggcaaagaat tgccaaattt taaaactatg gtttggactc aattttttga aaatttaagt
     4441 aagcttaaaa tgcaaataga aattcaaaga gatttagata ataatcttgt tgatattgtt
     4501 aaaaatttaa ttccttatgg ttgtaatatt gttatcgatc atttagcaag agctaatgca
     4561 aacttaacaa atttagagga tctaatttgt ttaaaaaatt ctagaatatt ttttaaaatt
     4621 agcggttttt atagagcaaa aatagactat gtcaataatg aacaagctgt aaaatttgca
     4681 aagaaaatat atgaaatttt aaaagaatat tttccactta gcaattttgt ttttggaagc
     4741 gattggccac atacaaattt tgaagcaaat gttaattttt catcggctct agcagctttt
     4801 aatgaagttg ttgtatctaa aaaagaacaa gagcaaattt taggggataa tgcttgtgct
     4861 ttatttgact tttaagcttt tcgttttatc ctaaagatgt attttgcaat gcgttcaaaa
     4921 tgtactctta gataaggttt ataaattaca aaaccaccca aaagtcctaa aatgcttcct
     4981 attacgacat caattaaacg agcgagtatc aatgtatctg cattttcact cataaaatta
     5041 gctgcttttg aaagataagt agcataagga gtaaagaaaa tcatagctaa agcatagttt
     5101 cgattgacta aaaattgtcc tataaaaaac aaagacatca taagtaaaac aagctctata
     5161 tcgtgaaatt gtttagataa aagccaccat gcaaaacata ctcctaaggc cgttcctatg
     5221 atgcgttgaa tttgtttaat ccatatagaa tttaaagtta caccttgcat aatagctgtg
     5281 caagaaatgg ctatccaata acttctttca agttctaaaa aagttcctat aaatatagaa
     5341 aaagccacaa aagaacccat gatcaaagaa tccacaaaaa ctgcatcaaa acatatgtat
     5401 tctctaggtg gaatttcgct aggtaaagca tttttaaatc cataaatcac aacgatagaa
     5461 tataacaaag ccattaaatt agctaccatt gccccaagaa aaacaagacc cactaaaaag
     5521 ataaaatcct tagcttcaaa aggagaataa gctcctaaaa cacaagaaaa tacaaagaaa
     5581 aaatatccag gtgcaccaat gttataatat ctaattaaaa tagaacttcc catggccaca
     5641 agtcctatag ggatgaaggc aaaaattgca ggcaaaaaat gggttaaaat tcctaagaaa
     5701 aaactagaaa ctatgccaaa agaacagcac atcacaacag ccattctatg atataaagga
     5761 gtgtttggaa catataaaaa agacaaagct cctatcatgg caatgagtcc atagtttaat
     5821 tttccaaaaa atacactaag ccctaaaact atacccacgc ctaaagccgc aaaaaaaggc
     5881 atttgccaaa cttgttcgct tgaatttaat ttagcaattt ctttaaagtg ttgctttagc
     5941 atttctattt tattcactct cgaatttgtc cttccccact gattatatat ttataagtgc
     6001 aaatatcttc aactcccata ggacctcttg catgcaattt gctggttgaa attccaactt
     6061 ctccaccaaa gccaaattct cctccatcgc taaaacgcgt tgaagcatta gcataaatac
     6121 aagatgagtt tataaggcgt tgaaatttag cgatatttga agcatcattt gagataatgg
     6181 tttcagaatg caaggagctg tgtttattga tatgctctat agcttcatcg caatctttta
     6241 ctaattttac acttaaagca aaatcaagcc attctgtatc aaaggtattt tcatctgctt
     6301 taaaaacttc taaatttgag ttgttaaaat aagccaaagc gttttcatgg gcgtgaattt
     6361 ttaccttaaa tttttcaaat tcagggatta aaagacttat aaaattttta gcaatttttt
     6421 catggattaa aagcgtttct aaagcgttac aaacacttac tctttgacac tttgcattaa
     6481 ggattatttt taaagccata tctaagttag cactttgatc tacaaaagca tggcacaagc
     6541 ctttatcttg ccttatgaga ggaattttag tattgtttgc aatttcttgt atcatgtttg
     6601 aacttccgcg aggtatgatc acatcgatta aatcatcaaa agctagaatt tgcaagatct
     6661 catctctttg agtaaacata gcaaaacaat cttgcaaatc aaattcctta agtactttat
     6721 taacaagagt aaatatagcc tcatttgtaa attttgcttc acttccacct ttaaatacac
     6781 aagcattgga actttttatc attaaagctg cgatttcagc gctaagacta ggccttgctt
     6841 cgtaaataac acaaatgagt cctaaaggaa tgcttatttt ttgtatgttt aaacccgcat
     6901 aatttttcca gcctttagaa attttgccta taggatcttc gatgtgagcg attttttcta
     6961 ggccttcaca aagagctaaa atacgttttt catctaataa aagcctatct ttcattgctc
     7021 cgctttttgt gaaatttgcc atatcttttt tatttgcttc taggataatt ttgaaatttt
     7081 ctcttaaaat ttgagctaat tttagaataa ttttttcttt atctttgggt gttaagttaa
     7141 gtagtttttg agaatttttc ttaatatttt caagcaaatt tcgcattttt aatcctttat
     7201 ttacaaaaaa cttgataaat tatacaaaaa aatttagaat tgaaaggtaa atataaatga
     7261 aaaaaataga tttaatcgta gtaggtgcag gtccaacggg cataggctgt gcggttgaag
     7321 ccaagcttaa aaacaaagaa gttttgatac tagaaaaatc aaataacatt tgtcaaactt
     7381 taatgcaatt ttataaggat ggcaaaagag tagataaagc ttataaggga tgtgaaggaa
     7441 ccaatcacgg acatgttcct tttgaagatg gcaccaaaga aagcactata gaaacttttc
     7501 aaaacgcttt aaaagagcac aatatagaag ttgaatttgg ttctgaagtt gagagtgtta
     7561 aaaatgaaaa tggagttttt ttagtaagca cagctaaagg tgtttatgag tgtaaaaaca
     7621 ttattgttgc tataggtaga atgggtaaac ctaataaacc tgattacaaa cttcctatga
     7681 ctttaacaaa aatcattaat tttaatgcca attcagtttt agcaaatgaa aaaattcttg
     7741 ttgtaggtgg tggaaattca gcagcagaat acgctgtgga tttggctaat tcaaatcaag
     7801 ttagcctttg ttatcgtaaa aaagaattca caagattaaa tgatataaat cttaaagata
     7861 ttcatgaagc tggaaattcg ggtaaggtag agttaaaact aggaattgac attaatgaag
     7921 tagaggatga taatggcaag gctaaggtaa attttaccga tggtacaagc gatatttatg
     7981 atagaatcat ttatgctatt ggtggttcta ctccacttga ttttttacaa aaatgtggga
     8041 ttaatgttga tgataaaggc gtgcctttaa tggatgaaaa taaacaaagc aatgttaaag
     8101 gcatctttgt agcaggagat attgctacta aaaatggagc aagtatagtt acagggttaa
     8161 atgacgctgt gaaaattctt tctgtgcttt aaaatttagc ctttgggcta aatttttatt
     8221 ttagtttaat ctagaaaatt catatgcaaa ataaaataaa tattaataaa cttattgcga
     8281 aattacttta tttaaattct tacatactag gacttttggc attttattag cggtttaaaa
     8341 tatttttaat tttaaatatt ttaaggatta ttatgtcaag tatttttagc accttaagcc
     8401 cttttaggct ttttgtaaaa tgtgccgtgc caaatgttat aagcatggct tttatttctt
     8461 tttattatat agttgatgga atttttgttg gaaaatatct aggaagtgat gctttagcgg
     8521 cactagcctt gattattccc tttatcatga tgtcttttgc tttggctgat atgatagcta
     8581 taggatcagc agtgcaaatt tcgatgtatt taggtttagg caagaagaat ttagctagaa
     8641 agatatttag ctcaagtatg ttgattattt ttataatctc ttgttttatt ggaattttag
     8701 agtatttttt aggtcctgtt ttgattgatt gtttaaatgt tagcgatgag attaaaacga
     8761 tggctaaaga atgtatgttt gtttttgctt tgtttgcacc ctttactatg ctttcttttg
     8821 ctttggataa ttatttaaga atttgcggaa aaactgctta tagtatggta atgaatgtga
     8881 ttatagcatt gagcaatata gtgcttgatt ttatttttat agtcgagttg ggttggggct
     8941 tattttcagc tgctcttgca acttgtttgg gacttgtttt aggtggtatt tttggaattt
     9001 ttcctttctt gtttcaaaat ttagagctta aaatttcgag cctatatatg aatttaaaaa
     9061 tttttaaaaa tattctttat aacggaagca gtgagttttt tggcaatatt tcaggatctt
     9121 tatatagtat ttttgcgaat tttgttttat taaaaatttc tgatactcaa gccgtggcag
     9181 ccttttctat agttttatat attgatagtt ttattataat gcttattatt gctatgggtg
     9241 atgcaatgca gcctgcgctt agttacaact atgctaaaaa agatttttca agaatcaaag
     9301 ctattataaa agtggtattt tttgcagggg gatttttatc tttattctct atagtgctta
     9361 tattgatatt tggagaaaat ttaatcacgc tttttacaaa agaaaacaat caagaattta
     9421 aaacttttgc ttatacagct ttgatgcttt ttgcttttaa ttattttttt gcatggttta
     9481 atgttttaag tggttctttt ttgacagctt ttaataaggc aagcttttct ttggttttaa
     9541 gtttggcgca aaatttattt atacctttgt tctttctttt gtttttatct tattttatag
     9601 gtttaaatgg agtatggcta agtccatttt ttgctgaatt ttgtgttttg attttagctt
     9661 ggatttttct taaaagaatt tttaaagatc tatctttata ggagatagat cttttttaaa
     9721 ttttatcaaa ggagcttttt tataattttt agaatttata tcctatacca gttaggacaa
     9781 tttgataggt ttcatcataa aatcctatat cactatttct tttttctata ccataatttg
     9841 caaaaccata aagtccgtta taacccaaaa attgattttt aacaactttt agattaagct
     9901 taactatatt accatcttgt tttttatgga agataggatc agttcctact gcttcatatt
     9961 tgctaagatt taaatttgga gtgaagatgt aatcattagc aaaagccaaa tttgttccta
    10021 tgctaaaacc atatcttgaa tagctttgag cttttccgtc tgcatcattg taatcataat
    10081 ttaaccctag gtttaataag ctataattat agtttaattc aaattcgtga taatacccct
    10141 ccctttttaa agagctttgt gcgatagtgt ctttatcata tttgtttttg ctaaataaat
    10201 atgaagtggt aaatttccca aaatcacttt cataaagttg agagatttta aaaccatatc
    10261 tatcaacatc agtttcttct ctatttcctg ttgcataagg atttgcataa gctttttctc
    10321 ttaaagagga aatcacagaa aaagaagtgc taaaacgctc taaataagct ctttcgtagc
    10381 ctaaagctat accgctgata tctcttccat tgtagttttt aataaaaatt ctatcattat
    10441 ctataaggtt gccatagtaa agttctacac cgataaaagg aatgaaagag gagtctgaat
    10501 tatcagcatt gtaactgctt agataatcac tgtttgccaa ggttgaaata ttacttttaa
    10561 tatcccttgc acccacacct atgcttaaat ttccactaaa accttcttga aattctacag
    10621 ccgtagctga ttgggttaaa atggaggcta aaacacagga aaataaatat tttttcaaat
    10681 gttctccttg aaatgtttgt tgtttgtaat taaattacat ttataattgt aactaatatt
    10741 acattaaata tttataaaaa aattaagttt tataatttaa gtttttttag atagaatttt
    10801 tagaattaat ttatatttat aaggaaattt agtgcagcaa gagtattatg acttggattt
    10861 agaacgagct attttaagca gttgtatcat gagtgaagaa gcttatgcta gtatagcagg
    10921 tgatattagc ccaaaagatt ttagtcttaa agctcaccaa gatattttta aagcggttat
    10981 agcttgtagt aataacaaag agcctatttc tgtaagtttt ttaagaaaac ataaaaaaat
    11041 agatgagcaa attttagcag aaattcttgc tactccttct atgatagatt tgcctgctta
    11101 tgtaaatgaa cttcgcgaaa agtctgtaaa aagacagctc ttgagttttg cgcatctttt
    11161 gccaactcgt atcaatgaag atcgtgctgt aagtgaaatc gcagatgaaa ttggtaaaga
    11221 aatttttagc attacaaatc gtgtgaattc tagagatatt aaagatgttg atatggtaat
    11281 atcagaactt tttgaagaat ttaaaaagca aaaaacttta gaaaataaag gtattatagg
    11341 gcttgataca ggttttgaag gtctaaataa aatgacaaaa ggttttaaag ggggtgaact
    11401 tataataatc gctgcgcgcc caggtatggg aaagacaact ctttgtttaa atttcattga
    11461 caagatttta agacaaaaaa aaggcgtggc tttgttttct cttgaaatgc ctgcaactca
    11521 aatcatgcaa agaatgctat cttccaaaac ttccattcct ttgcaaaaaa ttttaactgc
    11581 agatttaaac gatgatgaat gggagcgttt aggagatgct tgtaatgatt atagtcaaaa
    11641 gaaattatat atttacgata gtggttatgc aactatcgct gatgtaaggg ctattttaag
    11701 gcgtttaaaa tctcaagatg aaagtatagg actttgtgtg attgactata taggacttat
    11761 gatgagtaat tcaaatttta atgatagaca tttgcaagtt agtgaaattt caagaggact
    11821 taagcttttg gctagggagc ttgatatgcc tattatcgca ctttcacaac ttaatcgtgg
    11881 cttagagcaa agggcaaata agcgtccttt gatgagtgat ttgcgagaaa gtggagctat
    11941 agagcaagat gcggatgcta ttttgtttgt atatcgcgat gaggtttata gagaacaaga
    12001 agaaaaagaa agagagaata aagctaaagc tgaaggtaaa gcttatcaaa ggctttttat
    12061 accaaatcct atgcaagaaa atgctgaaat tattgttgga aaaaatagaa atgggcctgt
    12121 tggaactata gaagttgtat ttttaaaaga aaaatcttgt tttgtagata aacctatagg
    12181 ctatgaaact actgaattta caggctagct ttaatcaaat aatttaatat tttaaagtta
    12241 ttttttacga cacaacctgt cgcaagggtg ttttatactt tctttgttat tttaaaacaa
    12301 ggagagaaaa tgttaaaaca aatcgcattt ggtggtatag ctcttacagc tacaggatat
    12361 ggcataaaaa aattatacga aaaattatcc aagccagaaa gaaaatttga tacacatgct
    12421 attgttccaa gctgtaagga tatgatcaat accgaagaat acaaacttaa aagagagctt
    12481 gaagtcgaac aaaagaaaaa tcaaattcaa gaatttcttt gcgaatgcat ggagtgttat
    12541 agcggctttt caaaatattt taattctaag gaatttttag aatttgagca aaattttacc
    12601 tctaaaaata atcataaaac agaatttctt ttgtcatctt ataaagatca aatgataaaa
    12661 gtgatcgact atgctaaaaa atttgaatgc ttaagtgctt ttttggaaac acaaagcgaa
    12721 aaaaatgact tagcggttgt aaaaatgata agcgaaagta tggagagaaa aacacagaga
    12781 ttttatctgc aaacaaaatt tcaaactttt cctcagtata tttttccttc tgtgtggagt
    12841 tctcctatgt ggaataaaca atgggaataa tacttggaat tttaagtctt atagccggct
    12901 ttgttgctat agtgttgatg tgtagtttat attttatagt gtttatggtt tttgttggta
    12961 tggcgatact tatttttctt tctatgcaac cttatcctta caatataata ttttgtgcta
    13021 tatatttaat cacaatttta gcgctagtgc tatggcgtaa aacttaaaaa tttcactt
//
LOCUS       DARBAC010000046        12766 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.046, whole genome shotgun sequence.
ACCESSION   DARBAC010000046 DARBAC010000000
VERSION     DARBAC010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12766
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.046"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            37..633
                     /locus_tag="SB799_000968"
     CDS             37..633
                     /locus_tag="SB799_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEG0868216.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
     gene            752..1840
                     /gene="flhB"
                     /locus_tag="SB799_000969"
     CDS             752..1840
                     /gene="flhB"
                     /locus_tag="SB799_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HEG0868217.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGS"
     gene            complement(1846..2589)
                     /gene="motB"
                     /locus_tag="SB799_000970"
     CDS             complement(1846..2589)
                     /gene="motB"
                     /locus_tag="SB799_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEG0868218.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQALENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(2592..3368)
                     /gene="motA"
                     /locus_tag="SB799_000971"
     CDS             complement(2592..3368)
                     /gene="motA"
                     /locus_tag="SB799_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEG0868219.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPKISQFDKG"
     gene            complement(3384..6023)
                     /gene="polA"
                     /locus_tag="SB799_000972"
     CDS             complement(3384..6023)
                     /gene="polA"
                     /locus_tag="SB799_000972"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEG0868220.1"
                     /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEHKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISV
                     SQEGYEADDIIASFVRTCEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPHQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRNLLLEGKENAFLSKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKAALIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMSENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFGLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNALLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAHLAK
                     SYIEKYFENFTSIKKYFETVKNKAKQNGFITTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            6184..7545
                     /locus_tag="SB799_000973"
     CDS             6184..7545
                     /locus_tag="SB799_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HEG0868221.1"
                     /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALY
                     GLAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGYLGDKHGRKNVMMS
                     TVALMGISTTLIGFIPSYAVIGVWAPICLVILRFMQGFGAGAELSGGTVMLGEYAPSK
                     RRGLVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIR
                     FHVKETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLA
                     QGFIVGYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDRFGRRITYRMFCLLLM
                     IYAFPAFMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAK
                     ELGSILSGGTAPMVASALLAYYGTWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIE
                     DAI"
     gene            7542..8549
                     /locus_tag="SB799_000974"
     CDS             7542..8549
                     /locus_tag="SB799_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEG0868222.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILASKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFKRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVSKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLVPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYASKTRGTKGTWIHDALTIAYALDSSIADFDECYADVICDSSL
                     ARGMSWRCFKEPKMSMGVDLSTKNCVKILKNVDNTKLLKLIKERLLKGVCYENYESIT
                     T"
     gene            complement(8505..8948)
                     /locus_tag="SB799_000975"
     CDS             complement(8505..8948)
                     /locus_tag="SB799_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEG0868223.1"
                     /translation="MFDFLYNDISYLGLFIVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYGLAYLGKQKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF"
     gene            complement(8953..11778)
                     /gene="uvrA"
                     /locus_tag="SB799_000976"
     CDS             complement(8953..11778)
                     /gene="uvrA"
                     /locus_tag="SB799_000976"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEG0868224.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVSEILKFPKGAKIIIYAPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHCACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEEQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKGLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRAQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCQGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTRSYTGYYLDLELKNTQKS"
     gene            complement(11851..12636)
                     /locus_tag="SB799_000977"
     CDS             complement(11851..12636)
                     /locus_tag="SB799_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEG0868225.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNLINF"
BASE COUNT         4033 a         2008 c         2106 g         4619 t
ORIGIN      
        1 ttcgttatca ataaaattta ttatttagga gaaaatatga tagttactaa aaaagcttta
       61 gattttactg ctccagcagt attgggaaac aatgaaattg ttcaagattt taatctttat
      121 aaaaacatag gtccaaaagg agcggtagta ttcttttatc caaaagattt tacttttgtt
      181 tgtccttcag aaattatagc ttttgacaaa agatatcaag aatttaaaaa ccgtggcatt
      241 gaagtaattg gaatttcagg agataatgaa ttttcacatt ttgcttggaa aaatactcca
      301 gtaaatcaag gtggtattgg tcaggttaaa tttccgcttg ttgctgactt aactaagcag
      361 attgctagaa attttgatgt actttatgca gaagcagttg cccttcgtgg ttcgttcttg
      421 cttgatgctg atggaacagt tcgccatgct gtggttaatg atttaccact aggtagaaat
      481 atagatgaaa tgttaagaat ggttgatact atgcttttta caaatgagca tggtgaagtt
      541 tgtcctgcag gatggaataa gggtgatgaa ggtatgaaag ctaaccctaa aggcgtggct
      601 gaatatcttg gcaaaaacga agctaaactt taatttctta gtataaagcc tctttacgag
      661 gctttttctt catttttatt ctttaattga aattcataaa ttttctacta taattttaca
      721 cacatattaa aatttttatt taggctaaaa tatggcaggc gaagatcaag aaaaaacaga
      781 agaacccacg tccaaaaaga tagaagatgc gcgtaaagaa ggtaatgttc caaagtctca
      841 agatgcggca gctattgtaa ctttgataat tggagtaact ataactttat ttatgatgag
      901 ttttatgggc gagagaattg taaatttata tagatactat caaagtttta ttggtgttga
      961 atttgatttg cgtattattc aagccattat gattaaaagc atttttgagg ttttaattat
     1021 tcttgcacct attgttttaa gtattatgat tgctggggtt ttgggaaata ttatgcaatt
     1081 tggttttatt tttacaacta aacctattat gccaaattta ggaaaaatca atcctctaaa
     1141 aggtttaaaa aacctttttt cattgaaaaa aattgttgaa agtataaaaa ttattttaaa
     1201 agtgggtatt gtttttacta tagcttttat agttttactt aaatttatgc aagagcttcc
     1261 aagagttgag ctttatacta tggttgcaca gcttacttgg ctaagagaca gagctattgt
     1321 tttagcagct attgttatag ttgctttttt aattattgct gttttagatg tttttttggt
     1381 gcgttttcag tattttaaag gtttgcgtat gagcaaacaa gaaataaaag atgagtataa
     1441 acaaatggaa ggagatcctc aggttaaagg tagaattcgt agacttcaaa tggaagctgc
     1501 gcgtcgtcgt atggttcaag atgttgcagg tgcggatgtg gtgatcacaa acccaacgca
     1561 ttatgccgta gctattcgtt atgatacaag taaagaacaa gcccctaggg ttgttgctaa
     1621 aggagtggat tttctcgctc ttcgcataaa acaagtagcc tatgaaaata atgttgtagt
     1681 ttatgaaaat cctcctttag caagagagct ttataaagct tgtgatgtta atgatcttat
     1741 tcctagggaa atgtttaaag ctgtagctga ggtgctagga tttgtttata atacaaataa
     1801 taagagtcgt ttagctggtc aagtaaaaaa aggaagctaa aacttttaag gtgctttagt
     1861 tcctattttg ttaataagct caagaaccga tttttgagta cttgtatctg ctgtatcaac
     1921 tttaaaatat atttctactc tattattttc tagagcttgt ggatttccat tgataggatt
     1981 attaagcccg tagcttttaa tgctaatgtt ttttaaattt gctccacctt ctataaaata
     2041 ttttaataca ttttccgctc tttggtaggc gagttcataa cttcttataa tagagtcgct
     2101 attgtctgta tagcctctaa tttctatttt tgcttgaggt ggcaaatatg ttgttagttc
     2161 agccatacgt tttaaataat cttgtatatc agctgaaacg atttgagcgc tacctctttc
     2221 aaattcaact ttagatggaa ggttaagagc aacctgattg tcgctttgat ctagagccgc
     2281 ttgaagacgt ttgatagttt cttgctgcgt catagtcatt tgttttaatg atttgagttc
     2341 atcactttct tcttttgctg cgcctttata tttttcttga gttttactct cttctttgac
     2401 tgtttgagta gaggtgtaat caaagatttt aacaaattca gtttttaaag cctctacttt
     2461 agcaggattt gttttagaaa ttgcccaaag agcaataaaa agtgccaaaa gcaaacttag
     2521 aaagtctgca taaggtacag cccatttttc acctgcagga cattctggac atttatgttt
     2581 cttggccatt tttaaccttt atcaaattgt gaaatttttg gatcatcgtg acttaagaaa
     2641 ttaaaaagct tagcttccaa atctctaggg ttcgcacctt ctgcaattcc ttttatggct
     2701 tcagtgatga caatttgctc ttttacaaga tccattccgt tagctttcat ttttcttccc
     2761 caaggggcaa aaagcgcata agcaccaaaa atcccagtaa ccgtagctgt aaaagcacct
     2821 gaaatacccg ctgccattgc ctgaggatta tctagtaatt taagagctag aataagacca
     2881 aaaaccgcac caacaagtcc catagtaggg caagtttctc caaatactat ccaatattct
     2941 gcgcattctt tataatgctc ttcaagttgt tcggtttgta tttccatgct ttcgtgaatt
     3001 tcttcaaagc ttttaccatc tacaagcatc atcatagcat tttttaaaaa ttcattttca
     3061 atctcattgg ttcttgattc taacgctaaa agaccatctc ttcttgcaat aatagcaaat
     3121 tctattaact gggctatcct ttcaggtaga tttactccag aacctttaaa gacaactttg
     3181 agttctttat aagctgcttt tacaattttt ttatgtgtag aagtcattgc acaaaatgca
     3241 gccgttggca taactataag aaaggaagaa agatgcacaa catgtaaagg attaccacct
     3301 tctagtatat ctcctactga aatactagta actgcaagca ccattcccag tatggttgaa
     3361 agatccatta aatatctcct tgattatttt aaatcgcccc aatttttggc gatacttgag
     3421 cttgttttta attttacttt taattttact atattttcca taatatctct agtttttttc
     3481 acaaaatttt cacataaatc atcttttact tcaaaaatta attcatcgtg aatttgcaaa
     3541 ataagctttt tatcttcatt taattccttg ttgatttcta acattgcaag tttgattaca
     3601 tcagctgctg agccttgtaa gattgaatta atgctttctc tttcatacat ggcaatttgc
     3661 ataggttttg cgttttcaaa atcaaaataa cgcttgcgac cgcttaaagt agtgataaaa
     3721 ccattttgtt tagctttgtt tttaactgtt tcaaaatatt tcttaatact agtaaaattt
     3781 tcaaaatatt tttctatgta agatttggct aaatgagctt ctatttttaa attttgactt
     3841 aaagttttat agcccatgcc ataaataagt ccaaaattta tactttttgc aacacttctg
     3901 gtttcataat tgctttctcc aaaaatcatt atagctgttc ttgcatgtat atcttcatcg
     3961 ttagcaaaag catttaaaag tttttcatct tcgctaaaat gcgcaagcat tctcagttcg
     4021 atttgagaat aatcaagaga gataaaacta aatccatctt tagctacaaa gcaagattta
     4081 taatcttttg cgtattgtcc gtgtgcagga atattttgca aatttggatc tttagatgaa
     4141 aggcgtcctg tagcggttcc agtctgtaaa aaacttgaat aaatgcgtga atttttatct
     4201 tttaacgcta gttttaacaa aggttcgcaa taagtggaat aaagtttggc aagttctcta
     4261 taatctaaaa ttttggcaat tacaggatgt ttatctaaaa gtgcatttaa aactttttca
     4321 tcggtagaat atcctgtttt tccttttttt ccacttggaa gtttaagttt ttcaaaaagt
     4381 atatcaccta cttgtttagg tgagtttagg ttaaatctat cctcacaaag agtataaatt
     4441 tcttcactta aatttttgat ttcattttca aattttttca taaggatttc aagtgcattt
     4501 gtatcaagct ttatgccatt ttcttccatc atcataatga ttttaatgaa atcaaattcg
     4561 cagtttttag caagttctag caaaggagtt tcaagatttt ttaaaaaata aagataaaat
     4621 cttaaagtga tataagcatc ttccgcagca tatttgcaag ctttttcaag ctctacactt
     4681 gcaaaatttt ctcctttttt aacaaggctt tcaaaatgta aggtttcata attaaaaagt
     4741 cttaaagcta aatcatccat atttactctt aaagaaggat ttttaagcca tgctaaaatc
     4801 attgtatctg cgtatttttg aggtaaattt aatccaaaat tgttttgaat gattttaaaa
     4861 tcatatttga gattgtgtcc tataacaaaa tgattaaaga ttacttctat agcttttttg
     4921 gcgctttgca atgagatttg ctcacctact ccaagatagt tatgagttaa aggcacgtaa
     4981 aaagcttcat tttcactcat gcaaaaacta aaaccaacaa tttttgcttc ttttgtatca
     5041 agtcctgtgg tttcggtatc aaaagcaata atactttctt tatcaagggt atttaaaatt
     5101 tcaaaaagtt tgttttcatc ttgtattaaa gcggctttaa aacctaaatt tttatcttta
     5161 ttatcaggat tttgacgcag ttttttaagc aaagtattaa gttcgtaatg ttctaaaatt
     5221 tcaagtattt ttaaaagagg ttcttcatca ggataagttg ctttttctat aagatcttgc
     5281 acttctaaat tttcatacaa agaggctaat tttttgctta aaaatgcatt ttccttaccc
     5341 tctaaaagca aattacgact tctttcgttg cgtactaggg ttaaattttc ataaattcct
     5401 tctatactac caaattcatc aagtaaggtt ttagcccctt ttgcacctat acctttaacg
     5461 cctggaatat tatcagaact atctccgcaa agagctaaaa aatctctgat ttgatgaggt
     5521 tttactccgt atttttctaa acacgctgct tcatcatagt cgtttttaga aataggactg
     5581 taaatgcttg ttttaccatc ttttatgagt tgataaagat ctttatcttg agtgataatg
     5641 cgtacaaaaa tatccctatc ttcacaagtt cttacaaaag aagcgatgat atcatcggct
     5701 tcataacctt cttgagaaac gcttataaaa cccatttttt ctatcatctc tatgcaaatt
     5761 ggaatttgtt ctagaagttc aggtggtggt ggagtgcgat tttgtttata gtttggatca
     5821 atttcgctac gaaaagtttt tcctttggag tctaatgcaa aaacaatata atcactttta
     5881 tgttcatttt ttaagctata aataaaattt gcaaaaccgc taatcattcc actagcttgt
     5941 ccttgtgaat ttttaaaacc ttttaatgcg tagtaaagtc tgaaaaaaaa tccaaaagta
     6001 tcgataatag ttaaagtttt cataataatt tcttctttaa taaaatatat ttttaagctg
     6061 tattatttca aaattttgct taaaatgtct acaatttaag atctttaagc aaaaacactg
     6121 caatttttag ccataattac aaattattta taaaaaaata tattaaaata taaggataat
     6181 gtaatgacaa atcagcaaat tgatggaatt gcggataaga attttaatac acctgaaggt
     6241 aggaaagttt ttaaaaaggc agttttttct tgctggttgg gaactgctat ggaatatgca
     6301 gattttgcac tttatggttt agcagctgca acaatttttt cagaagtatt ttttcctgag
     6361 caaactccag taatcgcact tttgcttagt tttgtaactt atggcatagg ttttattgca
     6421 agacctattg gggctttgtt ttttggttat ttaggtgata aacatggaag aaaaaatgtt
     6481 atgatgagta ctgttgcttt aatgggaatt tcaactactc tcataggttt tattccaagt
     6541 tatgcagtaa ttggtgtttg ggcgcctatt tgtttggtta tattacgttt tatgcaaggt
     6601 tttggtgcag gagctgaact ttcaggtgga acagttatgc taggagaata tgctcctagc
     6661 aagagaagag ggcttgtttc ttctgtgatt gctttaggat caaatagtgg aactttactt
     6721 gcgtcttttg tgtggctttt gatggtgcaa atggatgagg caagttttaa agaatggggt
     6781 tggagagttc cttttatggg aagtatttta atcgctcttt ttgctgtata tattcgtttt
     6841 catgtcaaag aaacccctgt ttttgaaaag caaaaaaatg aaatgatgaa attgcgtctt
     6901 aataacgaaa agcatatgaa aaaagatgaa agaagttttt ggcaaagaag tcgtgctttt
     6961 tggactatgg tgggcttaag aataggtgaa aatggacctt cttatcttgc gcaaggtttt
     7021 attgtaggtt atgtgactaa aattttactt ttagacaaat cagtagctac tacagcagtg
     7081 atgatagctt cattggtggg ttttttggtt attcctttgg caggttattt aagtgataga
     7141 tttggaagac gtattactta tagaatgttt tgtttacttt tgatgattta tgcttttcct
     7201 gcttttatgc ttttagatag taaaaatgaa attattgtga ttttaactat tattgtaggt
     7261 atgtctttag catctttagg gatttttggt gtacaagcgg cttggggtgt agaacttttt
     7321 ggggtaaaaa accgttatac aaaaatggct tttgctaagg agctaggttc tattctttca
     7381 ggaggaacag cgcctatggt ggcttctgct ttgcttgcgt attatggcac ttggtggcct
     7441 attgcgacat attttgtatt aactgcaggt ataggttttg tgactacatt ttttgcgcca
     7501 gaaactagag gtagagattt aaataaaata gaagatgcga tatgagactt atcttagaca
     7561 cagatatagg caatgctatt gcaggagcaa ataccgatga tggtttagcg cttgctttga
     7621 ttttggcatc taaagaaatc aaacttgaaa tgctaagcac ggtttgcggt aatgttccaa
     7681 gccttgttgc ctatagtgtg gctaaggatt tatttaaacg tttaaattta aatattcctg
     7741 tttatttagg agcgaatgaa gccctaaaag aaccaagtaa agcttggcgt caaagacttg
     7801 atgaaagtgt aaaaaatttt aaacttgaat atctttggga aaatataaaa agtcccgaaa
     7861 ttttagaaaa tataaatcct gatgcgattt ttaaaatggg tgagttggtg agtaaaaatc
     7921 ctaaagaaat ttctatttgt gcgataggac ctttgacaaa tatcgctatg actatgaaaa
     7981 tttttaaaga ttttgatata aatcttaaag agctttttat tatgggcggt agttttgata
     8041 tgccttatta tactaaagat acaaattttg gtttcgatcc tgaggcggct agtatagtgt
     8101 taaattcaag agctaaaatt acactcgtgc cttataatgc aaccatgcag actttattaa
     8161 cacacgagga tttaaaagag ttgcaaggta agaatatttt atgtgatttt atcgttgaaa
     8221 ctttaggtgt ttggattgat tatgcttcta aaacacgtgg tacaaaggga acttggatac
     8281 atgacgcttt aacgatagct tacgcattag attctagtat tgcagatttt gatgagtgtt
     8341 atgctgatgt tatttgcgat agttctttgg caagaggtat gagttggcgt tgttttaaag
     8401 agccaaaaat gagtatgggg gtggatttaa gcactaaaaa ttgtgttaaa attttaaaaa
     8461 atgtagataa tacaaagctt ttaaaactta taaaagagag gcttttaaaa ggagtttgct
     8521 atgaaaatta tgaaagcata acgacttaat tttccaagta agataaaaaa tatagttttt
     8581 aaaaaagaat atttcgcaaa accaagtccc aaggcaaaaa gatctcccac caaaggtaaa
     8641 aaagtaaaaa aagcaaatat acttccaaat ttagcaaaat tagcattgaa attttctaat
     8701 tttttcaagg atttgctaaa gtatttttct aaaatttttt gcttaccaag ataagccaag
     8761 ccataagtac ttaaacttcc taaggtatta cccaaagtag ctacgataag cactaaattt
     8821 ggattaaaat caagttttat aaagcctaaa acaaaggctt cgcttgccaa aggtaatagt
     8881 gtgcttgaaa gaaaacacac tataaaaagt cctaaataac ttatatcatt atataaaaaa
     8941 tcaaacataa aattatgatt tttgtgtatt tttaagctct aagtctagat aatatcctgt
     9001 gtaagaacgg gtttttttgt gttctttagc gactttttcc acgcttcctg tgcttataac
     9061 ttttccacct ttaactccgc cttcaggccc catatcgatg atataatcag catttttaat
     9121 cacatccaaa ttatgctcta ttacaaaaac cgaattttta agatcaacca aatgttgtaa
     9181 aactaagatg agtttattga catcttcaaa atgcagtcct gttgtaggtt catcaagtat
     9241 ataaagcgtt tttcctgtat cgctacggct tagttcttta gcaagtttga ttctttgtgc
     9301 ttcacctcca cttaaggtgg tggcattttg tcctagggtt agatagtcta aacccacttt
     9361 tactagagtg tctaattttt gcttgatttt aggaacggct gtaaaaaatt cactcgcttc
     9421 taaaacactc atatttaaaa tttcactgat atttttgcct ttatatttga tttctagcgt
     9481 ggcatcattg tagcgtttgc cctgacaagt atcacaaact accataacat caggtaaaaa
     9541 atgcatttct attttgattt ctccatctcc gctacacttc tcacatcttc cacctttaac
     9601 attaaaagaa aagcgtcctg ctttataacc acgcatttta gcttctttag tggcggcaaa
     9661 aagatttctg atttcatcca tagcacctgt ataggtggca ggatttgaac gtggtgtgcg
     9721 tccaattggg ctttgatcaa gataaatgac tttatcaagt ttttcaagtc cttctatttg
     9781 caccccacca agttttttaa cttttttagc gcggtttaat tcctcttgtg caaaaggaag
     9841 tagggtttga agtatcaaag aactttttcc agaacctgaa actcctgtta tagcgactaa
     9901 attttgtaaa ggaaatttta cgcttaaatc ttggatattg ttaatattta catttttaag
     9961 ttcaagccat tctttttgtg ctctgttttg aagttgtgaa atttgttttt taccattcat
    10021 ataaagtgca gtttcgcttt tgctttttaa aagttcttta taagttccac taaatacaac
    10081 ctcacctcca aattttcctg cttttgggcc aatatctaca ataaaatctg cttcttctat
    10141 agtcatttta tcatgctcta cgacaattag ggtattgccc ttttgttgta aatttcttaa
    10201 agttttaatc agttttgcag tatctctttc atgaagtcct atgctaggct catctaagac
    10261 atacatcact ccacttaaac cactgccaat ttgtgaagct atgcggattc tttgtgcttc
    10321 acccccacta atcgttcttg catcgcgccc taaggaaaga taacctagcc ccacatcata
    10381 caagaaaaac aatctttcgt tgatttcttt taggataggt ttagaaataa gtttttgttg
    10441 ctcgcttaaa taggaaaaat ttttctcatc tgcaaaaaag gccgtactat cttctatgct
    10501 catatctaaa atttcaccca agcctttttt ggctactttc acggctaaac tttcgggttt
    10561 taaacgatgc ccaccgcagt ctttacaaat tttttcactc atatattcgg ctaaatcttt
    10621 ttcatctttt agcatttcat aagccatttt aaccacgcct tcaaaggtgc gttttagacg
    10681 atttcttttc caaagaaatt ctatagtttt ggcattacca tacaatacaa gacgtttttg
    10741 ttcttcgttt aattgcataa aaggtatttt gataggaatt tcattttgtt cgcaaaaggc
    10801 gattaggaat ttataataat aacttttgtt aaaaccatac atgattttaa cagcaccatt
    10861 ttcgaggctt aaattttcat cgataatttt tttcatatct aaagtataac gaatgccaag
    10921 tccatcacaa gcttcgcatg ctccttttgg agaattaaaa gaaaagctta aaggttcaag
    10981 tggaacaaag gaaattttac aatcaaaaca agcgcagtgt tcgctaaaat gatagtgttt
    11041 attaaggttt atttcctcat gatttaaaac ttctatttct atttctccaa agctttcttg
    11101 taagcctttt tctatatcgc ttgcaagacg agaaagtaaa tcttcttgaa tttcaagcct
    11161 atctatgaca agtttaatgg tgtgtttttt ggttttggcc agttcaattt cttcatcaag
    11221 tcttactaaa actccatcaa tttgagctct tacatagcct ttgttgcgta aattttcaag
    11281 taaatctgca taagttcctt ttttttctcg tatgagtgga gcgtagatga tgatttttgc
    11341 accttttgga aattttaaaa tttcactgac tatatcactt gcactcatag atgagatttt
    11401 ttgtccacat tgatgacaat gttgaatgcc cactcttgca tataaaagtc ttagataatc
    11461 ataaatttca gtgatggttc ctacagtaga gcgtgggttt ttagaagtgg ttttttgatc
    11521 tatagcaatg gctggggtta aaccttcgat tttatcgaca tcaggtttgc ctaccttatc
    11581 taaaaattgt ctggcataag cacttaaact ttctatataa cggcgttgtc cttcggcata
    11641 aagagtgcca aaagcaaggg ttgattttcc actcccactc agtcctgtaa aaacaatgag
    11701 tttgtttttg ggaatttcaa ggtggatatt ttttaggtta ttttctcttg caccaatgat
    11761 ttttatggta tcgttcatag tctttcctaa acattaaata aatttaagat tttagcataa
    11821 taatattaaa agaacttgga taaatccaag ttaaaaattt ataagattta gcttattaag
    11881 taaagagtgg gtggttccaa gtattgataa ggcatatacg caaagtaaaa tttttctatg
    11941 agctgaaata tgcatttttt ctatgatttt aattcctata aaaactccaa ccatagaagc
    12001 tatacctact agtattcctt tatgaataac ttcagagtct ataactccag aatttgaaaa
    12061 agatataata ccagagactg aagcaaaaat aacaaaaaac aaggataaag aaacaacttt
    12121 tttactatca tagcctaaaa aataagctaa aatcggagca attaaaagtc caccaccaat
    12181 tcccaaagaa atagcaaaaa taccagtaaa agctccagca ataaataaaa tgacattctt
    12241 tacccaaacg cttctttgat tttgcacaat gttttcttta attccaaaag catatttgat
    12301 aaaaaatata caacttaccg ccaaaaatac gctagtaaga gctacatcac ttaaagcttt
    12361 taaaagcatt ccgctaaagc ttgcccctat gagtcctcca aaacctatca taataccatc
    12421 tttaagattt agattttttt tcttataatt aatataagag ccaaaaactg ctgcaaaaat
    12481 catttgcaat actgaaattc cgatagcatg gtgagcactt gctccaagtg cgaacataga
    12541 aggaacgata atcatacctc caccaatgcc aaaaagtcca gaagcaatac ctgaaatgat
    12601 tcctatgatt agataaggta aatctgtgat ttccatagct tttcctaaaa aatattaaat
    12661 atttcaaata cggaataatt ttatcttatt aagctaagta ttatcttagt tttttataac
    12721 aatagaatat tttttggtaa ctttaagcat cgtaaaaatg tttcaa
//
LOCUS       DARBAC010000047        12664 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.047, whole genome shotgun sequence.
ACCESSION   DARBAC010000047 DARBAC010000000
VERSION     DARBAC010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12664
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.047"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..257
                     /locus_tag="SB799_000978"
     CDS             <1..257
                     /locus_tag="SB799_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868226.1"
                     /translation="SKIIHFKVLKDDLKPNVKEKIHFFAMFFTLFKLMAYVILVAGFL
                     FLHRQDKLDIFAYICGISSLLVCVFIFILYIKKYESKKNY"
     gene            235..1422
                     /locus_tag="SB799_000979"
     CDS             235..1422
                     /locus_tag="SB799_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868227.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFVGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAVL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLTIVTSFIAGMLINGF
                     FSMASLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIISLAFLILFAINKPNILNKKFKKKPGNMVI
                     FDD"
     gene            1415..3664
                     /locus_tag="SB799_000980"
     CDS             1415..3664
                     /locus_tag="SB799_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0868228.1"
                     /translation="MINTQLASQIVNTQKNDLKVDNSASKDKTNLKDNPKEALAEALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKTLSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATAFEKLENTLKNILGNQASKIQDKENILENLLSNKENM
                     KEEKLNHNTKNQDEEKHIKASKEETLTDDTKTDIKQDSKNEENSHAKETDIKEDENLD
                     SDIKTHEEDTQDTKNDIQNNETENKPDNDIKNSTPNQEKIKDGKQEKSKENIKENPKF
                     YETKTENKTSINTNTNTSNPNTNNTQNLNNSQNIQSNNNQTMQNIFKNQEFIKQNIVK
                     NLAFNVENLDLEQVQDLSKNLNNLSRRLNESLKELEPYTQNAKLNQAELKNLEHKLNL
                     STKDLAQIKPKTEQDIAESLHHDVKSTLLQISNLAKNEGNEAVYNQANRLLAQIEINQ
                     LMSLANDSINTYLPFSWDDLNDSKIMFRRGKKDKFFAQIKLEFAKLGDLEILISLNNE
                     KYIDINIMAENIEFRKTIYENAHELKRNINKAGLLSANFFVGDIIRSKFDTRNMKNLD
                     LEMGMDKKV"
     gene            3661..3942
                     /locus_tag="SB799_000981"
     CDS             3661..3942
                     /locus_tag="SB799_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HEG0868229.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(3939..4739)
                     /locus_tag="SB799_000982"
     CDS             complement(3939..4739)
                     /locus_tag="SB799_000982"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEG0868230.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKYFNIDMSEFKS
                     PCEYESLNALFTRTLHIPRKLEEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYSI
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGALYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDTSIQTNAKISHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGILNFNLKAGQGIKFGEKIAD"
     gene            complement(4736..5860)
                     /locus_tag="SB799_000983"
     CDS             complement(4736..5860)
                     /locus_tag="SB799_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEG0868231.1"
                     /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFAFIFI
                     VLFLAQAVFLIFRRDEYLSDTWYEILAMLYAPTYCLFFMTLAWDFIKLILALMGKRDK
                     KYNLILRLIFEFSLIVLSVFLIYISINNALKTPEVKSVDVEIPNLKQDLKIAMLTDIH
                     LGKNLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYA
                     LGNHEYYHGINEVLDLLRKHANMKILVNQNLDLGFINIAGLGDLAGLNKGLYAPDLAR
                     IKVDLNTSKASILLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVHG
                     LYNLGEKTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
     gene            5946..7241
                     /locus_tag="SB799_000984"
     CDS             5946..7241
                     /locus_tag="SB799_000984"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEG0868232.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFGISWQHYYIQSENLKFHRQMALKLISEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAQLAKFYT
                     QEASTIKELKEKMRAIFNTKDFGEFETECKILKELLKDIELFENYEDFKNELLSKSDL
                     KGKKFFMPLRIILTGNIHGPELGDLYPYIKNFIHELARI"
     gene            7244..7525
                     /locus_tag="SB799_000985"
     CDS             7244..7525
                     /locus_tag="SB799_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEG0868233.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIIAALLSWVNPDPYNPIVQ
                     ILYKLSYPAYTLVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            7522..9147
                     /locus_tag="SB799_000986"
     CDS             7522..9147
                     /locus_tag="SB799_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEG0868234.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYTANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRHSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLNKS"
     gene            complement(9044..9529)
                     /locus_tag="SB799_000987"
     CDS             complement(9044..9529)
                     /locus_tag="SB799_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868235.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDINLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKVSLPNVKEETKLVTKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            9625..10116
                     /gene="mobB"
                     /locus_tag="SB799_000988"
     CDS             9625..10116
                     /gene="mobB"
                     /locus_tag="SB799_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEG0868236.1"
                     /translation="MKQLIMAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLAPNFDICLVEGLKT
                     LDLPRISVFCKEIDESYFTFSNAIASYEKISHPYLTWLDLNDIQAICRYILKNAKNLQ
                     GEL"
     gene            10118..10960
                     /locus_tag="SB799_000989"
     CDS             10118..10960
                     /locus_tag="SB799_000989"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEG0868237.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLS
                     DGIITKTLSQCSSIKAIISEEKDEILTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLKMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNHSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            10953..11150
                     /locus_tag="SB799_000990"
     CDS             10953..11150
                     /locus_tag="SB799_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868238.1"
                     /translation="MSDIRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            11160..>12664
                     /gene="metG"
                     /locus_tag="SB799_000991"
     CDS             11160..>12664
                     /gene="metG"
                     /locus_tag="SB799_000991"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEG0868239.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYISSLDFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNILKEGVLKYYNTELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSCEKVALALNFEISSTNYAKMILDNELLDFKANPCEALFPKV"
BASE COUNT         4832 a         1888 c         1780 g         4164 t
ORIGIN      
        1 tatcaaaaat tattcatttt aaagttctaa aagacgattt aaagccaaat gttaaagaga
       61 aaatccattt ttttgctatg ttttttactc tctttaaatt gatggcttat gtaatattgg
      121 ttgctggatt tttattttta catcgccaag ataaattaga tatctttgct tatatttgtg
      181 gaatttcatc cttgctagtt tgtgtgttta tttttatttt atatataaaa aagtatgagt
      241 ccaaaaaaaa ttattaaatc aatgacagca ctttttgctg gtatggcatt tttatttgca
      301 ggtaatgcct tgatagtaag ctctataggt gttatattaa aagaaaacgg agaaagttct
      361 ttagctgttg gagtagtaag ttcttgtttt tttgtaggcg ctcttgttgg aactatcagt
      421 gctcataaaa ttatttctcg tataggtcat atacgctctt ttgggctatt tggtgctatt
      481 tttggaattt cagctatgct tcatacagta agcgaaaatc ttattttttg ggctgtttta
      541 agatttttca taggaatttg ctactatgga cttttaatgg tcatagaatc atggcttaat
      601 gaaaaaagca aaaatgccat tcgatctaga attttaggtt tttatgaaat tgttttttat
      661 cttgcgtttg gtattggagt tttaatcata gcgttaaatt tgagcaaaca tagtgtattt
      721 attctcagtg caactttaat tttactttca tctttacctt taaatctaat taaaatcaaa
      781 gaacctgttt tgcccgcatc aagtcctatt tctataccta aaatttttga tatagctcct
      841 ttgactatcg tcacaagctt tatagctgga atgcttataa atggcttttt ttctatggca
      901 tctttattta tacttttgca aggttttgat acaaaagcgg tttcttattt tatattttgt
      961 ggggttttag gtggttttat tgcacaaacc atcataggaa ctatttcaga taaacttggt
     1021 cgcaaatttg ctattatcac ttgcgcaagc ataggattta tcactatgct tatatttatc
     1081 ttttttaaac ttcatttgta tatgcaatat tttttaggaa ttactcttgg tataggaata
     1141 ttttgtttat atgctttagc acttgctaga gcaaacgatg ttttagtaag caaaaataaa
     1201 ggcgtagagt taggtcgtgg ggttcttttt tgttattctt tgggctcttt gtttggccct
     1261 ttaattttag gttttttaat gcaatatttt gaaatcaaag gttttatatg gttttatata
     1321 atttctttag catttttaat tctttttgct atcaataaac caaatatttt aaataaaaaa
     1381 tttaagaaaa agcctggaaa tatggtgata tttgatgatt aatactcaac tagcaagtca
     1441 aattgtcaat acgcaaaaaa atgatttaaa agtagataac tctgcttcaa aagataaaac
     1501 aaatttaaaa gacaatccaa aagaagcact tgcagaagct ttaaagcaaa atttaggttt
     1561 aagcaaggac gctagtagtg aggaaatact agcaaaattt gttcaaaatg aaacaggtac
     1621 caaattaaaa gaacttgtta ataaactttt agatcaaatc aatgctcaaa aaaatcccga
     1681 ttcccctgta cttaaacaag gaaaaaattt aaatttagct cctaattttg ctaatgaatt
     1741 aaaaacttta agtacagaac ttgcaaaaag cgatactttt acacaagttt tagatagatt
     1801 aaatcaaatt ttaaaacctg ccagtgaaat aaaaaacaat aacttagctc ctttgtttaa
     1861 aaattcaggc gtatttttag aagctaaatt aaaagatgcc ctaaacgaag aattactacc
     1921 caaaagtttt cactctcttt taagtacaat caaaggtctt agtagcgaaa aactaagcgt
     1981 tcagatagcc cagcttgcaa atacaaattt aagcccaaaa gacactttaa aagaattaaa
     2041 aaatattatt aattctagca aaaatgaaaa taagcaaatt ttaaatcaaa gttcttttaa
     2101 agcactttta aatttaagtt ctaaattgga aaattttaaa aattatataa gtaaaaatcc
     2161 cagtcatgct caagaaaaaa tcacccctat agctaataaa attttaaaag aattaaattc
     2221 catcaaaaat gattttttca aagctcttaa taagccagaa aatttaatga taaaagatcc
     2281 aaacatcctt aagcaaactg ctaccgcctt tgaaaaactt gaaaatactt taaaaaatat
     2341 actaggcaat caagcttcta aaatacaaga taaagaaaat attttagaaa atcttttaag
     2401 caacaaagaa aatatgaaag aagaaaaact taatcataac acaaaaaacc aagatgaaga
     2461 aaaacatata aaagcatcaa aagaagaaac tctcacagat gatactaaaa ccgatattaa
     2521 gcaagattca aaaaacgaag aaaattcgca tgcaaaagaa actgatataa aagaagatga
     2581 aaatttagat tctgatataa aaactcacga agaagatact caagatacaa aaaatgatat
     2641 tcaaaacaat gaaacagaaa ataagccaga caatgatata aaaaactcta ctccaaacca
     2701 agaaaaaatt aaagatggaa aacaagaaaa atcaaaagaa aatatcaaag aaaatccaaa
     2761 attttatgaa acaaaaacag aaaacaaaac ttcaatcaat acaaatacca acacttcaaa
     2821 tcctaacaca aacaatacgc aaaatttaaa taattctcaa aatattcaat ctaacaataa
     2881 ccaaactatg caaaatattt ttaaaaatca ggaatttata aaacaaaata ttgtaaaaaa
     2941 tttagcattt aatgtagaga atttagatct agaacaagtg caagatttaa gtaaaaattt
     3001 aaacaatctt tctcgtagac ttaatgaaag cttgaaagaa cttgaaccct atactcaaaa
     3061 tgccaagctt aatcaagcag aacttaaaaa tctcgaacac aaactcaatc tttctaccaa
     3121 agatctagcg caaattaaac caaaaacaga acaagatata gctgaatctt tacatcatga
     3181 tgtaaaatca acacttttgc aaatttcaaa tttggctaaa aatgaaggca atgaagctgt
     3241 atataatcaa gctaatcgtc ttttagcaca aattgaaatc aatcagctta tgtctttagc
     3301 taatgattct atcaatactt atctgccttt ttcttgggat gatttaaatg attctaaaat
     3361 tatgtttaga cgcggaaaaa aggataaatt ttttgctcag attaaactcg aatttgcaaa
     3421 acttggggat ttggaaattc ttatttcttt aaataatgaa aaatatatag atattaatat
     3481 tatggcagaa aatattgaat ttagaaaaac catctatgaa aatgcccatg agcttaaaag
     3541 aaatatcaat aaagcaggac ttttaagtgc aaatttcttt gtaggtgata tcataagaag
     3601 taaatttgat actagaaata tgaaaaattt agatcttgaa atgggtatgg ataaaaaagt
     3661 atgagcaaaa tcaaaagatc aattaaaaaa gctgtagctc taggctatca aaaagaaaaa
     3721 aactctgccc caaaagtgct tgcaagtggc aaaggtgaaa gtgctgctaa aattatttct
     3781 ttagccaagg aacacggagt tcccattaaa gaagatgaag atttaataga aattttaagc
     3841 aaacttgact taggcgatga aattccacct aatatgtata aagctgtagc tgaagttttt
     3901 gcctttatct atcaaatggc aaataaaact cctaaaaact aatccgctat tttttctcca
     3961 aatttaatac cctgccctgc ttttaaatta aaatttaaaa tccctttttg agagattaaa
     4021 actatagtag aacccagttc aaaatttcct agttcttcgc cttttttgaa atttaaattt
     4081 tcatattttc tagtaaaatt atgagaaatt ttagcattgg tttgtatgct tgtatcaaaa
     4141 ttaaaacgca tttttcctac attttgcgct cctacaaaaa caagccaaaa aatacctttt
     4201 tcattttgac attttaaact cactctttca ttttttacat ataaattact aatgcgttct
     4261 aaatgctttt catttacact ataaagggcg ccgcttgtgt aagttgcgct taaaatttgc
     4321 atatcacaag ggctgtgata acgatgataa tcttttggag aaagatagat attgacataa
     4381 tcaagcccat ttttaagctc atctttttca aagctatctt ttaaaagctc ctcaatgcta
     4441 taagtatgcc cttttataga aaaagcaaaa tgttcttcat ttgccaaaaa agtacttcca
     4501 cactctaaaa ttttaccatc acttggactg ataaaacctt cttcaagttt tcttggaatg
     4561 tgcaaagttc ttgtaaaaag agcatttaaa ctctcgtatt cacaaggaga tttaaattca
     4621 ctcatatcga tattaaaata cttaacataa ttttcattaa taactttttg tatcatttta
     4681 ggaaatttaa tccccgctac aaaaccaaaa agcctcgaac tttcttttga aaaactcatt
     4741 tttttccttt taaatttaaa atcactattt cactcggagc aaaaactcta agacttggcc
     4801 cccaaaatcc tgctccacta ctcacataaa gcttagtttt ttctcctaaa ttataaagcc
     4861 catgaacaaa accttgctga agtttaacta aaaacataaa aggaaaaatt tgccctccat
     4921 gcgtatgccc acttaaaaca aggtcaaaat cacttaaatc ataaagcaaa gctgttttag
     4981 gttgatgtgt gagtaaaata ctagctttac ttgtatttaa atccactttt attcttgcta
     5041 aatcaggagc atataacccc ttattaagtc cggctaaatc tccaagtcca gcaatattta
     5101 taaaacccaa atctaaattt tgattgacta aaattttcat attagcatgt tttctaagta
     5161 aatccaaaac ttcattgata ccatgataat actcatgatt tcccaaggca taaaaagttc
     5221 cataagtgga attaaaatca ttaagttttg agatgtaatt ttttaaatct ttaggattag
     5281 tatcaatcag atctcctact attacaacca tatcaggact ttgcaaattc actttagtga
     5341 tgagcttatc taaaaaattt tcatgcaaat ttttacccaa atgtatatca gtaagcatgg
     5401 caatttttaa atcttgttta agatttggta tttcaacatc aacactcttt acttcaggtg
     5461 tttttagagc attatttata cttatataaa ttaaaaacac acttaaaact ataagagaaa
     5521 actcaaaaat caaacgcaaa ataagattat attttttatc tcttttaccc ataagagcta
     5581 aaatcaattt aataaaatcc caagctaaag tcataaaaaa caaacaataa gtcggcgcat
     5641 aaagcatggc taaaatttca taccaagtat cacttaaata ttcatctcta cgaaatatta
     5701 aaaacacagc ttgggctaaa aaaagcacaa taaaaataaa ggcaaaaatt ttataaaaat
     5761 acttaaaaag agtaattttc ttgattaatc ttttataaat ataaacattt gctaagccaa
     5821 aaatcaataa tacaatgaaa gaaaaaatta aaaatatcat aaaagtatta taaccaagta
     5881 aaattaaata tccgtataaa tttttctgtt ataataagct tttaaataat tttaaaggct
     5941 ataaaatgta ccgttttgca ccttctccca caggtgatat gcacatagga aatttacgcg
     6001 cagcaatttt taattatatc tgtgcaagac aaaaaaatat ggattttatc ttacgtattg
     6061 aagatactga taaggctaga aatatagcag gaaaagaaga agaaatcaaa gaaattttaa
     6121 atctttttgg tatttcatgg cagcattact atatacaaag tgaaaattta aaattccatc
     6181 gccaaatggc tttaaaactt ataagtgaaa aaaaagcttt tgcttgtttt tgtaccgaag
     6241 aagaacttga agcaaaaaaa gagttagcta aaaaacaagg taaagcttat cgctacgatg
     6301 gcacttgtga aaaactagcc gatattgatg ttttagaatg tgaaaaaccc tttgttatcc
     6361 gtcttaaaaa acctactcat actatgaaat tcactgattt tatcaaaggc gagcttagtt
     6421 tcgagcctga aaacatagac tcttttgtca tcatgagaac agataaaact ccaacttata
     6481 attttgcttg tgcggttgat gatatgcttg aaaatgttac ttgtattata cgcggagaag
     6541 atcatgtttc aaacactcca aaacaagaac atatccgcgc aagcttaggt tataataaag
     6601 ctatgactta tgcacacttg cctatcattt taaacgaaga aggtgttaaa atgagtaaaa
     6661 gagaagcaca ttcttctgta aaatggctac ttgaaagtgg aattttacct agcgcaatcg
     6721 caaattatct tatcatgcta ggcaataaaa ctccttgtga aatttttacc ttagaagagg
     6781 ctataaaatg gtttgatatt tctaaagttt caaaagctcc agcaagattt gatcttaaaa
     6841 aacttttgca aatcaatcgc gaacatatca aaatgataaa agatgatgag cttaataaaa
     6901 ttttagattt aaataaagat cttgcacaac ttgctaaatt ttacactcaa gaagcaagca
     6961 ccataaaaga acttaaagaa aaaatgcgag ctattttcaa cacaaaagac tttggagagt
     7021 ttgaaacaga atgtaaaatt ttaaaagaac tcttaaaaga tattgaactt tttgaaaact
     7081 atgaagattt taaaaatgaa cttttaagca aaagcgactt aaaaggtaaa aaatttttca
     7141 tgcctttaag gataatttta acaggaaata tccacggacc tgagcttggt gatctttatc
     7201 cttatattaa aaattttatt cacgaattag caaggattta actatggtta tagactcttt
     7261 tattatttct atttttcaag tactacaaat tgtcattaac atttatactt ggattattat
     7321 catcgcagca cttttaagct gggtaaaccc tgatccttat aatcccatag tgcaaatttt
     7381 atataaatta agttatcctg cttacacctt agttagaaaa attccaacac gcattggtaa
     7441 tattgatctt gcgcctttga ttatagtctt agcattgcag tttcttggca tttttcttgg
     7501 gaatatctta aggagtatat tgtgataaaa aaaatactcg tttttttatt tattttttca
     7561 agtttaaatg ctacacaata tagcatagaa aaactcaaaa aggaagaaaa ttcacttgct
     7621 aaggattatt atatttatag gcttttagaa aaaaataaaa tcagtaaaaa agatgcacaa
     7681 gatttaaatt ctcatatttt tcgctatata ggaaaaatta aatccgaact tgaaaaaatc
     7741 atccctttaa agccttatat caacccaaaa tatgctaaat gctataccta tacagcaaat
     7801 actatcttag atgcaaattt aacttgtcaa agtgtgcgct taaattcatt agtttttata
     7861 gcgagtttaa attccaaaga ccgaacgact ttagctcaaa cctttaaaaa tcaaagacct
     7921 gatttgacaa atttattact agcttttaat acttctgatc ctatgagcta tatagtacaa
     7981 aaagaagata ttaatggttt ttttaaactt tataattatt ctaaaaaata cgacttagat
     8041 ttaaatacaa gtttagtcaa taaactacca aaccacattg gttttaaaga ttttgcacaa
     8101 aatattatta ttaaaaaaga aaatccaaaa tttagacatt ctatgctaga aataaatcct
     8161 gaaaatgtaa gtgaagattc tgctttctat ttgggagtca atgccttaac ttatgataaa
     8221 acagagcttg cttatgactt ttttaaaaag gcggcacaaa gttttaaatc gcaaagcaat
     8281 aaagacaatg ctatattttg gatgtggttg attaaaaaca atgaagaaga tttaaaaact
     8341 ttatcacaaa gttcttcttt aaatatttat agtctttacg caaaagaact tactaacaca
     8401 ccttttccaa agatagaaag ccttaatcca agcaagaaaa aaaataattt taatatgcaa
     8461 gatccttttg cttggcaaaa aataaacaaa caaattcgcg atgctaacgc aagtcaacta
     8521 gatgtcttgg caaaagaatt tgacacacaa gaaaccttgc ctatttatgc ttacatatta
     8581 gaacgcaaaa ataattttaa aaaacattat tttataatgc cttattatga caatataaaa
     8641 gactataaca aaacaagaca agctttaatt ttggctattg ccagacaaga aagtcgtttt
     8701 attccaactg ctatttcagt ttcttatgct ttaggcatga tgcaatttat gccattttta
     8761 gccaatcaca taggggaaaa agaattaaaa attccaaatt tcgatcaaga ttttatgttt
     8821 aaacctgaaa tagcatatta ctttggaaac tatcatctaa attaccttga atcgcgttta
     8881 aaatctccac tttttgtcgc ttatgcttat aatggcggta taggatttac taaccgtatg
     8941 cttgcaagaa atgatatgtt taagacaggc aaatttgaac ctttcttgtc tatggagcta
     9001 gttccttatc aagaaagccg aatttacgga aaaaaagttc tagctaatta tattgtgtat
     9061 cgacatcttc tgaacgatag tataaagatt tcggatattt ttgaaaattt aattcaaaac
     9121 aaggcaaatg atctaaacaa atcttagtta caagcttagt ctcttccttg acattaggaa
     9181 gagatacttt aaaataatca gtatagttgt tttgtattat atattttaag tactcatcat
     9241 ccaatttttc aatattggct tttttattat tgataaaaac ttctaaattt tgaattttta
     9301 atgtatttgg agtaaaagac aaggccaata catcatcttt acttgtctta tctagaattg
     9361 gatttaaata agacatagtt ataatggcat taatcttatc ttgtgtgatt ttgtattttt
     9421 gagtaaacat taaagtttga gattttaaat ttatatccac aatcgcctga tcttttaaag
     9481 aacaagctcc aagcaaaaaa gcacctaaaa ttacactata aattttcatt ctttttccat
     9541 attttttagt attattgtag ccttttaacc ctattttttg gtttaaaaag atataatttt
     9601 acaaaaaaat taagagtata ttttatgaaa caacttatca tggcttttag cgggccttca
     9661 aattcaggaa aaactacact tatcacaaaa atagctgata attttttgca acaaaattta
     9721 aaagttttaa tcattaaaca tgatcctgcc gataaagctc aatttgattt taacggtaaa
     9781 gatagtttta aatttttcca aagcggagct gaagtcatgg ttttaagccc tacaagaaca
     9841 actttttttt ctcatgaaaa tagagatatt ttaaaagctt taaaattagc acccaatttt
     9901 gacatttgtt tggttgaagg attaaaaact cttgatttac cacgcattag cgtattttgc
     9961 aaagaaattg atgaaagtta ttttactttt tcaaacgcta ttgcaagcta tgaaaaaatt
    10021 tcccaccctt atcttacttg gcttgattta aacgatatac aagctatttg tcgatacata
    10081 cttaaaaatg ctaaaaattt acaaggagaa ttataaaatg caagaagtga tttcttatat
    10141 acaaaaagcg gttttagaaa tttctaacgc tttaaaattt cccgatacaa gctacagtca
    10201 aaatcaaaat tttacaggcg atacccaact caaatttgat gttttaagcg atggaatcat
    10261 cacaaaaact ctaagtcaat gttcaagcat taaagccatc ataagtgaag aaaaagacga
    10321 aattttaacg cttaacgaga gggcaaattt tatcgtagct tatgatcctt tagatggttc
    10381 tagcttaatg gatgttaatt ttgccatagg ttctattttt gccatctatg aagaaaaagc
    10441 aagtgctaaa aatttaagag ctgcacttta tagtatgtat ggagcgcgct tagaacttgt
    10501 gatttgcaaa gatcagccaa aactttatcg cttaaatgca aataatgaat ttatttttat
    10561 aaaagatctt aaaatgaatg aaaaaggcaa gattaatgct acaggcggaa cgcaaaaatt
    10621 ttgggaagaa aaacatgcca aatttatcaa aagtcttttt gatgaaggct atcgcttaag
    10681 atattctgga gccatggtaa gcgatatcaa tcaaatttta ttaaaagggg gtggcatttt
    10741 tagctatcct gcaacacaag atgcgcctaa tggcaaactt cgtgcctttt ttgaagtctt
    10801 tcctctagcc tttatcatag aaaaagcagg cggaaaaact acaaatggaa aaaaccactc
    10861 cttacttgaa cttgaatttg ataaaatcca tgcgacaact ccttgttttt ttggctcaga
    10921 atatgaaatt tcaaaacttt taaaggctta taatgagtga tattagagat gaatttgagc
    10981 aagatatgga taaaaaaaaa gaaattttac tttcatgtca aaactcaaaa aacctaaact
    11041 cttgttataa ttgcgatgaa atttttaact gccaaactag aaaaaattat gttgatgcag
    11101 tctataacag tatgtctaag ggtaaaaccg aaggcggatt tgacttttaa aggaaaaaaa
    11161 tgcgttatat tacaacacca atttattatg taaatgatgt gcctcattta ggtcatgctt
    11221 atactaccat catagccgat actttagcaa gattttatcg tttgcaagga catgaaacaa
    11281 gatttctaac aggaacagat gagcatggac aaaaaatcga agaagctgcc aaactaagaa
    11341 attccactcc tcaagaatat gctgataaaa tcagttttga atttaaaaaa ttatgggatg
    11401 aatttgaaat cacctatgat atttacgcaa gaacaactga tacaaggcat attgaatttg
    11461 ttaaagctat gtttttaaaa atgtggcaaa aaggcgatat ttataaagat gaatacgaag
    11521 gacactattg tatttcttgc gaaagctttt ttactcaaag tcagcttatc aatgattgtt
    11581 cttgtccaga ttgtggcaaa aacactacga ttttaaaaga agagagttat ttttttaaac
    11641 tttcaaaata ccaagataaa attttacaat ggtatgaaga aaaagatccc atcctaccaa
    11701 aaaacaaaaa aaacgaactt ataaattttg tccaaagcgg ccttaaagat ctttccatta
    11761 caagaacaag ttttgattgg gggattaaac tgcctcaaga aattaatgat gataaacata
    11821 ttatttatgt atggcttgac gcacttttta tctatataag ctctcttgat tttcaaagca
    11881 agggagaaaa tgctaaattt tggcctgcgc atgtgcattt agtaggaaaa gatattttgc
    11941 gttttcatgc catttattgg ccagcttttt taatgagcgt agatttacct ttgccaaaat
    12001 ttataggtgc acatggctgg tggactaaag aaggtgaaaa aatgagcaaa tctaaaggca
    12061 atgttgtaaa acctaaagaa gtggttgatg cctatggaag cgaagctttt agatatttct
    12121 tgcttagaga agtgcctttt ggtaatgatg gggattttag cgaaaatatg ctgataaatc
    12181 gtatcaatgc tgaactaagc aatgaatttg ggaatttgct taatcgcatt ataggtatga
    12241 gtacaaaata ttctcaagga aatattttaa aagaaggtgt tttaaaatat tacaatactg
    12301 aactaaatca agcaaaagaa cacttaaatt tagcggtaga atttttagaa aacttacagt
    12361 gtaatcgtta tttagaagaa ctttttaaag ccttaagcgt agcaaattta gccatcagca
    12421 aatacgaacc ttggaattta atcaaagaaa acaaacacga acaagctaac gctttagttg
    12481 cactttgtgc aaatatttta gccaaaacaa gccttttatt aagccctact ctaccaaagt
    12541 cctgtgaaaa agtggcttta gctttaaatt ttgaaatttc atctacaaat tacgcaaaaa
    12601 tgatacttga taatgaactt ttagatttta aagcaaatcc ttgcgaagct ttatttccaa
    12661 aagt
//
LOCUS       DARBAC010000048        12604 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.048, whole genome shotgun sequence.
ACCESSION   DARBAC010000048 DARBAC010000000
VERSION     DARBAC010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12604
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.048"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..812
                     /locus_tag="SB799_000992"
     CDS             <1..812
                     /locus_tag="SB799_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEG0868240.1"
                     /translation="EISTYFLSVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQS
                     AKNEVAKDYALIQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDV
                     LRPAPYNNGYIIVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFK
                     GDDIGFVSRDSSRESVKLSDKILNDSEFAYFLMNVFNTDQNSSYVIINDNKAILYKIN
                     KQKLDMNSDKFEQYKTMLEQNLRNLKANELKQELVDELKKIYPIKIYYKGN"
     gene            809..2197
                     /gene="ftsA"
                     /locus_tag="SB799_000993"
     CDS             809..2197
                     /gene="ftsA"
                     /locus_tag="SB799_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEG0868241.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDKVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDAESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2213..3325
                     /gene="ftsZ"
                     /locus_tag="SB799_000994"
     CDS             2213..3325
                     /gene="ftsZ"
                     /locus_tag="SB799_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEG0868242.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            3480..4292
                     /locus_tag="SB799_000995"
     CDS             3480..4292
                     /locus_tag="SB799_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HEG0868243.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            4321..5112
                     /gene="flgG"
                     /locus_tag="SB799_000996"
     CDS             4321..5112
                     /gene="flgG"
                     /locus_tag="SB799_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEG0868244.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5178..6608)
                     /gene="glnA"
                     /locus_tag="SB799_000997"
     CDS             complement(5178..6608)
                     /gene="glnA"
                     /locus_tag="SB799_000997"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEG0868245.1"
                     /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     NEETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKDGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
     gene            6811..7506
                     /locus_tag="SB799_000998"
     CDS             6811..7506
                     /locus_tag="SB799_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEG0868246.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLEDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEALELNNQAKKSSKQIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            7503..8756
                     /locus_tag="SB799_000999"
     CDS             7503..8756
                     /locus_tag="SB799_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEG0868247.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHVFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFESSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGS
                     FFKCKGKIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDRYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            8757..9251
                     /gene="purE"
                     /locus_tag="SB799_001000"
     CDS             8757..9251
                     /gene="purE"
                     /locus_tag="SB799_001000"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEG0868248.1"
                     /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMPGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            9261..9797
                     /locus_tag="SB799_001001"
     CDS             9261..9797
                     /locus_tag="SB799_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HEG0868249.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            9809..10672
                     /gene="glyQ"
                     /locus_tag="SB799_001002"
     CDS             9809..10672
                     /gene="glyQ"
                     /locus_tag="SB799_001002"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEG0868250.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNETE"
     gene            10659..11384
                     /locus_tag="SB799_001003"
     CDS             10659..11384
                     /locus_tag="SB799_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEG0868251.1"
                     /translation="MKLSEIYNFLDQLSPFDIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMICKNISLISMHTNYDL
                     SHLNTYFTEEILGFKISFKDEFLIYVENSMSFEALCDWVKKKLNLQILRVSDCGKKDI
                     KRIAICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQAIITVSKNPFQYF"
     gene            11394..12110
                     /locus_tag="SB799_001004"
     CDS             11394..12110
                     /locus_tag="SB799_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEG0868252.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINRTLKDAELKIGKINT
                     DLEKIDEEIKDIENQKVQNNAHISEFSAKIKELSKKSGAVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVGEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            12107..>12604
                     /locus_tag="SB799_001005"
     CDS             12107..>12604
                     /locus_tag="SB799_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEG0868253.1"
                     /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKTSLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKTLVLKFDSRITTITQTGFEYAKEFCKKVNYLAFENFL
                     PFWFKPCKVLVIFEAEYWLMLVFMAHIYKTKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYIDEV"
BASE COUNT         4564 a         1597 c         2362 g         4081 t
ORIGIN      
        1 atgaaatttc aacttatttt ttgtcagtta gcaatgagaa aattgacgac aaagaattag
       61 aaaaatttta taatcaagat gaaaataaac taaaatataa agattttgca ggtaaagtga
      121 tggattttca gtctgctaaa aatgaagttg ctaaagatta cgccttaata caactaaaga
      181 atgtggctaa tgctaaattt ttagatttaa aaaacgggaa agataatttt caaaaagatc
      241 aaaatattag tgaatctgat gtttattatc caattgatct tttgaataaa gctaaaaatg
      301 gagatgtttt acgaccagca ccttataata acggatatat catagttaaa ctaaataaag
      361 tagatcctat aagaaataaa acttttgaag aagctagaga agaagtttta cctatgtatt
      421 taagcgaaca agctagaaaa aatttagaag aaaaagctaa aaatagttta gtaaatttta
      481 aaggcgatga tataggcttt gtaagtcgag atagttctcg cgagagtgta aagcttagtg
      541 ataagatatt aaatgattct gaatttgctt attttttgat gaatgtattt aataccgatc
      601 aaaatagttc ttatgtgatc attaatgaca ataaagcaat attatataaa ataaataaac
      661 aaaaattaga tatgaactcc gataaatttg aacaatacaa aactatgctt gaacaaaatt
      721 tgcgaaattt aaaagcaaat gagcttaagc aagaacttgt tgatgaactt aaaaagatat
      781 atccgataaa aatttattat aaagggaatt gattttgaat atattaggaa ttgacttagg
      841 ctcaacccag acttgtgcca ttattgctca aaaagatgaa gatggattaa aaattattgg
      901 tttttccaag tcgaaaacca acggggttaa aaaaggtgcc attaccaata tagagcttgc
      961 ttctaaatct attgaagaag ctgttagaag tgctgagatg atgagcggag ttcattatga
     1021 taaggttgtg gtgtctatat caggtgctta tactaaaagc gttgatagca taggtgttgt
     1081 taatattcca aatcatgaaa taggcattaa agaaattcat cgtgctgtaa gtacagctaa
     1141 gcatactgcc aatctaccaa gtggttatga aattatccat gttttgcctt ataattttaa
     1201 ggttaatgat cttgaacatg ttgatgatcc tttgggaatg agtggtaatc gtttggaagt
     1261 ttcaacccat atagtgattt cacaagaatc tcatattaaa aatcttaaga aagcagttga
     1321 attagctgat ttaagagtgg ataatatagt tctttcagga tatgcttcag ctatagcttg
     1381 tttagatgat agcgaaaagg aattaggtgc tgttttgatt gatatgggtg gagcgatttg
     1441 tgatatggtt gttcatactg gaaattcaat tagatataat gattgtttgc aaattggctc
     1501 gattaatatt acccaagatt tatcaatggc attgcataca cctttaaaag aagcagaaaa
     1561 aatcaagctt aattatgcag ctctttcaca acagcctaat acccttatac aaattccttc
     1621 aatgggtgat gaaagaaagg ttaatgaagt ttctttggat attatttcaa acgtaattta
     1681 tgcaagagcg gaagaaactt tgatgatttt ggcaaaaatc ttaagtgata atcgttatgc
     1741 caatgctata ggcggtggag ttgttttaac aggtggaatg actaagttag caggtattga
     1801 tgagctagct cctgcaacat ttgataatcg ctcagttaga ctagctactg caagaaaaga
     1861 tttgattact ggttttagtg aaatttttaa tgatcctgaa aatacttgtg ctataggact
     1921 ttgtttatat ggagcggggt attttacgcc ttatgaactt gattctaatg aaaaattaag
     1981 atataaaggg gaaattgaaa attttaatcg tcaaattaaa caagatattg ttttgcaaaa
     2041 agatgcagaa agtgaaataa aatctgattt ttttgatgaa aatttgcaag aaaatgatac
     2101 aattgcaata caagaacaat tagattttaa agagccaaaa gaaaaaaaac ctagcgtttt
     2161 ttcaaatatc tggcataaaa ttatgaatca attttaacaa ggagaaattt ttatgagtga
     2221 atttttagta gaagaaatgc aacataataa aggtgcaaaa attaaggtta taggctgcgg
     2281 tggcggtggc ggtaatatga tcaaccatat ggttaaaatg ggattaaatg atcttgattt
     2341 aattgcagca aatactgatg cacaagctat ttcaatttca ttagcaaaaa ctaaaattca
     2401 acttggcgag aaaaaaacta aaggtttagg cgctggtatg cttcctgagg taggtgcaga
     2461 aagtgctaga gaaagttttg aagaaataaa agcaagtctt agtcaaagtg atattgtatt
     2521 tattgcttca ggttttggtg gaggtactgg aacgggtgcc actccagtta ttgcacaagc
     2581 agctaaagag attggagctt taactgtttc tgttgtaact atgccttttg cattcgaagg
     2641 aaaacaaaga aaaaaacttg ctgaaagcgg tctccttgag cttaaaaaag aaagtgattc
     2701 tattcttgta attcaaaatg aaaaattatt gagcattatt gataaaaaag caggcattaa
     2761 agatgctttt agattggttg atgatatttt agctcgtgct gtaaaaggta tggtgtctat
     2821 cttgcttgat aatggagata ttaatgttga ctttgcagat gtaagaacca tcatgagtca
     2881 tcgcggactc gcacttatgg gcgttggtag tgctagtggt gaaaatgcta tagaagaggc
     2941 tctttcaaac gctatagaat ctcctttgct tgatggaatg gatattaaag gtgccaaggg
     3001 agttatttta cattttaaaa caagttctaa ttgctctttg tttgaaattt cagcagcagc
     3061 aaatagtata caagaaattg ttgatgaaaa tgctaagatt atttttggtt ctactacaga
     3121 tgatagcatg gaagatagag ttgaagtgac tattattgcg acagggtttg aagacaaaga
     3181 tacagtagct aaaaaatcta ccgaagaagc tcaagcttct aagaaaaatc cttatttaag
     3241 tcttaaaaag gtaagcggtg gttacgatga agagataatg gcgcaaattg aaacaccgac
     3301 tttcttgcgt cgtcaaatgg attaaaattg attttaaagc aagattgagt caaatcttgc
     3361 tttttatagt ttaaaattct ctcctaataa tctttcaaat atttattttt ctttgttttt
     3421 aaaagttgga acactctttg cttttatagc tataaaatct taattttata ggtgaaaata
     3481 tgcaaaatgg atattatcaa gcaactggcg gaatggtaac tcagtttaat aaacttgatg
     3541 tgattactaa taatcttgcc aatattaata caagtggata caaaagagat gatgtggtta
     3601 ttgcagattt taaaaggatt tttaaagaaa ctcaggatga gttgcctata gaaaatcaca
     3661 caagagatgc atctcgtttt gtaaatacta caatagatgg aatcccgcaa gtttctcaag
     3721 aatatacgga ttttagtcta ggttctttaa aggccacaaa caatcctttg gatttggcaa
     3781 tgactagaga agatgctttt tatttggttc aaaccaaaga tggagaagta agattaacca
     3841 aagatggaaa ttttcaactt gatgatgagg gttatttggt aaataagcaa ggatacaagg
     3901 tattaagtag tgattatttt aataatcctc agaatgctgg catacgcatt cctaatggtg
     3961 ctgttcaaat tagcgttgat aaaaacggaa gcattgaggt tgatggagct caaaatgcaa
     4021 gattatttgt agcacaagta gatgatataa gagctttgca aaaagatggg gataatgtct
     4081 ataaaataga tgatctaacc cgcattagag atttggaaaa ctccaatgct attcgccaag
     4141 gtttttctca gggatcaaat gttaatccag ttactgaaat ggtaggactg attgaagcaa
     4201 acagaatggt agaaatgtat caaaaagtta tgacagctca tatggatgac ttaaatcaag
     4261 aagctatcaa taagcttgca gctgttaaat aatttaaaat aaaataaaaa aggattaaaa
     4321 atgatgagat cacttcatac tgctgctacg ggaatggtag cgcagcaaac acaaattgat
     4381 gttacttcaa ataacatcgc caatgttaat acagcaggtt ttaagaaaag tcgcgcagaa
     4441 tttgctgatc ttatgtatca agttatgaag tatgcaggaa cttcaacttc agctactact
     4501 ctttctcctt cgggtataga agtgggtgtg ggtgtgcgtc caacagcggt aactaaagtt
     4561 tttactgaag gaaatttaaa atcaacaagt actgatggtc ttgatatggc tattgcaggt
     4621 aatggttttt ttcaaataca acttcctgat ggcactatag gatatactag aaatgggcaa
     4681 tttacaaaag ataatgaagg taatattgta aattcagatg gttatagact tttacctgaa
     4741 atgacaatac ctgaaggcgc aacagcaatt aatgttgcta cagatggaac cgtttctgta
     4801 atgctaccag gggagcaaca agaaactcaa attggccaag tggagctagt tcagtttata
     4861 aatccagcgg gtcttcattc tatgggtgat aatctttatc ttgaaacagg agcaagtggt
     4921 gcacctgttg cgggtatagc aggacaagat ggacttggaa caataagaca tggatttata
     4981 gaacttagta atgttcagct tgttgaagaa atgacagatc ttatcacagg acaaagggct
     5041 tatgaagcgg gttctaaggc aattacaaca agtgatgata tgctaggaat tgtaaatcag
     5101 cttaagcgat agttgatata aaataaataa tttttaattc ttttttattt aatggcgtgt
     5161 taaacgccat taaattttta gcaagagtag caagttttaa attcataagc agttggacga
     5221 gcttctactg gccaaacttg tgtttcaaat tttaaatgct gatagtcatc gataaaaata
     5281 tcgctcatta caggttttaa ataagaatta tgtcggatta aagcttctaa acttcctctt
     5341 agagtatgtg gtaattgctc tatccctttt tcacgtattt catccaaagt aagatcaaat
     5401 aaattttcat ccataggacc cacaggaatg gttttatttt tgattccatc aagacctgcc
     5461 attaaaagac taacaaaagc taaataagga ttagcagtgc tatcagggaa gcgaatttct
     5521 atacgagctg aatttttacc tatgccataa ggaacgcgac aacttgctga tctgttttga
     5581 caagaataag ttaaaataca aggagcttca aaaccaggaa ctattctttt gtaagaattg
     5641 gaacttggat ttgtaaaagc tgcgacactt ctagcatttt ttaaaattcc acctatataa
     5701 tttatagcag tttgactaag tccactgtat ccatctttat cgtaaaataa atttacccca
     5761 tctttccata agctcatatg aacatgcata ccattgccat tatctccgta taaaggtttt
     5821 ggcataaaag tggcagtttt gccatttaaa tgagctacca tttttacaac atatttataa
     5881 atttgaacat tgtcagctgc ttctacaagc gtgccaaaat ttactcctat ttcagcttgt
     5941 ccttgtgcaa cttcatgatg atgaacaaaa gttttaagac ctactttttc aagagtttga
     6001 accatttcag aacgaatatc tactaaagaa tcaattggct gaactggaaa atatccacct
     6061 ttgtttcttg gcctgtgtcc agtattgtag ctatcggtaa attctctatc atcattccac
     6121 tctccttctt cggtatcaac ttcatactta gaacaatgag tagtatcaac tatttttaca
     6181 ctatcaaaaa caaagaattc attttctggt ccaaagtaag cagtatcagc aatgccacta
     6241 tttttaaggt gttccattgc tttttttgct atgcttcttg gacatttttc atacatttgt
     6301 cctttgtaaa tatcatacac atcacaaaat actatgatag taggatcagc tgtaaaagga
     6361 tctaaaaaag cactttgtgc atcaggtttt aaaatcatat ctgatttttc tataggttgc
     6421 catccatgga ttgagcttcc atcaaatgga atgccagttt gaaatgtttc ttcattgatt
     6481 gcatggagat tataggtaat atgatgccaa gttcctatca tatctgtaaa acgaaaatca
     6541 acaaaaagca cttcattttg tttgcaaaat ttgaaaaaat catctatatt attaacaaat
     6601 tttcccatat ttttactcct ttatgtaatt aaatttataa aattatatca taaaattttt
     6661 aattaagatt taattaatat atttttttta ataaatttaa aaatttaatt taaaaagatt
     6721 aaaaaataaa aatttatatt tttgttttag ataaaattga ttataatttt gagcaattat
     6781 tgaaaatcta gatttaaaaa agggaaaaaa atgactcaag aagagcttga tgctttgatg
     6841 aatggtgatg ttgatcttga ttcagagaca gaagcagagg taaaaaccga agaatcaaat
     6901 accgaagaag atgctttgat gttagaagat gtcaaaatag ctgattacaa acctaatcct
     6961 agtgtagtat ggccaccacc cccaccaaat caggagcata aagttgtaca tcagttagat
     7021 gatgttacaa aagatagcga gcttaaagca acggaaatga tggataagct tgaaagtatt
     7081 aataattttt ttgcggattc tgaaagttta ctcaaagaaa taaataaagc aatagaaaaa
     7141 aatattgata ttttttctaa acttaatgaa aaatttccta atgtggaaag tttcagtgaa
     7201 gctttagaat taaacaatca agctaaaaaa agttctaagc agattgtcgg aaatcttcaa
     7261 agcggacaag atgaagtgat gatggcaatg gatgcaatgc agtatcaaga tatacatcgt
     7321 caaaaaatcg aacgtgttat taatgtaatg cgtgctttaa gccgttatat gagttcttta
     7381 tttgaaggta aaattgatga taaaaaacgt gtaagttctg cagtgcatat tgaaggtgat
     7441 agtactgctg atgttgtaag taatgatgat atagaagctt taattgcaag tttagggcaa
     7501 aaatgatcat tcctgaaata gtagctcctg caggaaattt cacaaaatta aaaattgctt
     7561 tagcttatgg cgcagatgcg gtttatgcgg gtgtgaataa tttttcttta agatcacgca
     7621 ctgcaagaga atttaattat gaaagttttg aagaggctat caaatatact catgagcgtg
     7681 gtaagaaaat ttatgttact ttaaatggtt ttcatttgag ttctcaaatt gaaggtttaa
     7741 aaagacatat tttaaaattg cgtgagatga agcctgatgc ttttatcgta gcttctgttg
     7801 gagctatgcg tcttgttaaa gaacttgcac ctgaaatttc tttacatgtt tctactcagg
     7861 caaatatttt aaattattta gatgctcaag tttataagga tatgggtgct aaaagggttg
     7921 taattgcgag agaattggga cttaaagatg ctaaagcttt aaaagaaaat tgcgatattg
     7981 aacttgaagc ttttgtgcat ggttctatgt gttttgctta ttcagggcgt tgtttaataa
     8041 gctctgtgca aagtggaaga atgagcaatc gtggatcttg tgcaaatgat tgcagattta
     8101 attatgagct ttatgctaaa aatccagaaa atggtacttt atttcgttta gaagaagatg
     8161 aaaatggtac tcatgtgttt aattctaagg atttaaatct ttgttcttat atagaaaaaa
     8221 tcatgcaaga aaattgtatc agtgctttta aaatagaagg gcgtactaaa agcgaatatt
     8281 atgttgcgct tacaacaagg acttataaaa tggccataca agatgcttta gagggtaaat
     8341 ttgagtcaag taagtatgaa aaagagattg ctacgcttaa gaatcgtggt tttacagatg
     8401 gctatcttgt ttcgcgtcct ttagaaaaaa ccgacacgca aaatcataat acaagcatag
     8461 aagaaggttc tcatcaagta catgctataa gcgaagatgg aagctttttt aaatgtaaag
     8521 ggaaaatcgt tttaaacacg ccttatgaaa ttttagctcc tttaggcgat gtgattcaaa
     8581 cttgcgataa tgaactaggt aaaatttatc aaaaagagga tagatatttt atagagttta
     8641 aaaaactcat tgctaaaaac aataaagaat ttagcgaaat tcatagcggt aatgaacatg
     8701 aaatccaatt accaaataaa atcagtgcat taagtttttt aagaaaggaa atatagatga
     8761 attttgtttc tattttaatg ggaagcaaga gtgattatga gactatgaaa gaggctgcta
     8821 aaactttaga aagttttggg gtaaagtatg aacttatcat ttcatcagct catcgtagtc
     8881 caaaaagaac aaaagagtat attgcaaatg ctgaagaaaa aggtgcgaag gtttttatag
     8941 cagcagctgg aatggcagcg catttagctg gagctgttgc agcttataca acaaaacctg
     9001 ttttaggagt gcctatgcca ggaagtaatc ttgcaagtat ggattctttg ttttctacgg
     9061 tgcaaatgcc tagtggaatt cctgtaggaa ctttagctat tggtaaggct ggagcgatca
     9121 atgctgctta tttggctatg caaattttag ctatttatga tgttgattta gcacaaaagc
     9181 ttaaagaaga tcgtcttgaa aaagaaaaaa aacttgtatc tgattcaaaa gaagtagaag
     9241 ttttattata agggataaaa atgcaaacct atcttgaact tgaagaattt tgtaaacttg
     9301 tgcatttaaa tgaagatgtg gttaagggta tgatggccaa tggggcttta aattttaaag
     9361 aagaagaggg taaaatttac atcgaagctc atcagggtac ttttagtgta gtacctagtt
     9421 ctgcaaaatc tcaaactgca atggtaaatt caatgacttt agcaggagaa agttttgttg
     9481 aaaaaacaat aggaactatt ttaaatttgc atgaaaaagt tttagatgct aaagatgaaa
     9541 cacttgaagc attaaaaaat gagaataaat ttttaaaaga cgccctttat tctatgcaag
     9601 aactttatga tgaagataga aaaactatag aaaccttaaa caatgagcta aaacatgcgc
     9661 gtgaagagat agaatttctc aagcgtaaat ataaattaat gtggagtaaa accgcagaaa
     9721 tttttggagc taagacagag cctgatttgg aaatgaataa aaatttagaa aaacctattg
     9781 aaaatatgga acaataaaga gagatacaat gactttttca caaatgatac ttaatttgca
     9841 aaattattgg caagagcaag gttgtgcgat tatgcaacct tatgatatgc cagcaggtgc
     9901 aggaaccttt catccagcaa cttttttaag aagtttagga aaaaaacctt gggcagctgc
     9961 ttatgtggct ccaagtagaa ggcctactga tggacgttat ggtgaaaatc ctaatcgctt
    10021 aggtgcttat tatcaatttc aagttttgat taaacctagt cctgataata tccaagaatt
    10081 atatcttaaa agtcttgaaa atttgggttt tgatttaaaa agtcatgata ttcgttttgt
    10141 tgaagataat tgggagagtc caagtttggg tgcttggggt ttaggctggg aagtatggct
    10201 tgatggtatg gaagtcactc aatttactta ttttcagcaa gttggcggta tagcagtaga
    10261 tttagtaagt gctgaaatta cctatggtct tgaaagaata gctatgtatc ttcaaaatgt
    10321 tgataatgtt tatgatatag tttggagtga atttaatgga gaaaaaatta aatacgcaga
    10381 tgtgcataag caaagtgaat atgaatttag taaatacaat tttgaagtaa gtgatgttaa
    10441 gatcttaaat gagcagtttg aaaattctta caaagaatgt aaaaatattt tagaacaagg
    10501 actagcttta cctgcttatg attattgtat gcttgctgca catactttta atcttttaga
    10561 tgcaagagga gcaatttctg tagcacaaag acaagattat atgttaaaaa ttcgtgagct
    10621 ttcgaaaaat tgtgctgaaa tttataagaa aaatttaaat gaaactgagt gaaatttata
    10681 attttttaga tcaattaagt ccctttgata tccaagaatc atgggataat agtggaattt
    10741 tgcttggaga tagggatagt gaaatttcaa ctgtttattt aagcttagat attgatgaaa
    10801 atatcattaa agaagcgagt gaaaattctt taattatcac acaccatcct ttgatattta
    10861 aaggtttaaa agatttatat gacaagactt atcctagagc ttttattaaa gaaatgattt
    10921 gtaaaaatat ttctttaatc agtatgcata caaattacga tttaagtcat ttaaacactt
    10981 attttacgga agaaatttta ggttttaaaa tttcttttaa agacgaattt ttaatttatg
    11041 tggaaaattc tatgtctttt gaagctttgt gtgactgggt gaaaaaaaag ttaaatttac
    11101 aaattttacg tgtaagtgat tgtggtaaaa aagacattaa gcgtattgct atatgtactg
    11161 gaagtggcgg ggatttaatt tctaaagtag atgcggattg ttttttaagc ggagatttta
    11221 aatatcatca agctttagag gcacttagta atcaaattag tcttattgat ttgggtcatt
    11281 ttgaaagtga gagatatttt tctcaatgtt tagcaaaaga cttgaaaaat ttgccgctac
    11341 aagctataat aacagtttca aaaaatccat ttcaatattt ttaaggaaaa taaatgaata
    11401 aatatctcga acaattagtg cttttatcaa aaatagatca agaaattgat agttatgaac
    11461 caaaaataga cagtattaat aggactttaa aagatgctga gttaaaaata ggaaaaatca
    11521 acacagattt agaaaaaatc gatgaagaaa tcaaagatat agaaaatcaa aaagtacaaa
    11581 ataatgctca tatttctgag ttttcggcaa aaattaaaga gctttctaaa aaaagtggtg
    11641 cagtaaaaac agaaaaagaa gctaatgctt taaaaattga agaagatatt gcaaaagagc
    11701 aattagacgc tgcaaatgat gaaattgtaa gactggataa aattttagag aataaagaaa
    11761 cttataaaaa agaacttgaa gaagaaaaaa tcaaacaaga gcaaaatatt aatgagatta
    11821 gagtaagcat taaatctgaa atggaagttc ttgaaaaaga tagaatgagt gtttatgata
    11881 aaaaaaccaa acttgtgggc gagatgaatc aaaaagtttt aagtttttat gaaaaaattc
    11941 gcaaatgggc gaaaaatact gctgtagttc ctgttaaaaa acaagcatgc tatggatgtt
    12001 ttatgaaaat ttacgataag acttatctgt ctgttgtaaa aggtgaagag attgtaactt
    12061 gtcctcattg tggaagaatt ctttataaag agcaagaaga acaaaattga tcttttttta
    12121 ttatttttta acttggacgg catttttatt ttgtgccgtc tttattcttt tgctttcttt
    12181 tttaaaatcc aaatacaaaa ctagtttaaa atcccgattt tttctttata aaaatttaca
    12241 tcaagaaaaa gctgatgtac attttcatgc ttgttcttac ggggaggtaa gaagtattaa
    12301 aactttggtt ttgaaatttg attcaagaat aactactatt actcaaacag gttttgaata
    12361 tgcaaaagaa ttttgtaaaa aggtaaatta tcttgctttt gaaaattttt tgcctttttg
    12421 gtttaagcct tgtaaggttt tggtaatttt tgaagcagaa tattggctta tgcttgtttt
    12481 catggcgcac atttataaaa ctaagattat tttgcttaat gcgagaatat ctgataaatc
    12541 ttatcattct tatcaaagat tttctttttt ttataaaaaa attttttctt atattgatga
    12601 agtt
//
LOCUS       DARBAC010000049        11887 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.049, whole genome shotgun sequence.
ACCESSION   DARBAC010000049 DARBAC010000000
VERSION     DARBAC010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11887
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.049"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            31..702
                     /locus_tag="SB799_001006"
     CDS             31..702
                     /locus_tag="SB799_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011116320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEG0868254.1"
                     /translation="MNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVVNNL
                     VLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKYLK
                     VVGLVDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMK
                     EISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSNPKTERARLFLG
                     KILKN"
     gene            724..1503
                     /gene="peb1A"
                     /locus_tag="SB799_001007"
     CDS             724..1503
                     /gene="peb1A"
                     /locus_tag="SB799_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HEG0868255.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            1505..2257
                     /locus_tag="SB799_001008"
     CDS             1505..2257
                     /locus_tag="SB799_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0868256.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            2268..2927
                     /locus_tag="SB799_001009"
     CDS             2268..2927
                     /locus_tag="SB799_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0868257.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            3035..3964
                     /locus_tag="SB799_001010"
     CDS             3035..3964
                     /locus_tag="SB799_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEG0868258.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGALDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            4131..6242
                     /locus_tag="SB799_001011"
     CDS             4131..6242
                     /locus_tag="SB799_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEG0868259.1"
                     /translation="MTQLSTKILWLFVATLGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGRFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEHTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMGKARYTWVTLVPAVFVLVATLYGGIQKIMPYEEGNKVANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISTIKKEISIATQNKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            6223..6420
                     /gene="kcuS"
                     /locus_tag="SB799_001012"
     CDS             6223..6420
                     /gene="kcuS"
                     /locus_tag="SB799_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HEG0868260.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(6460..6873)
                     /locus_tag="SB799_001013"
     CDS             complement(6460..6873)
                     /locus_tag="SB799_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEG0868261.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKKPISEELKRIHGFLNA"
     gene            6935..8767
                     /gene="ciaB"
                     /locus_tag="SB799_001014"
     CDS             6935..8767
                     /gene="ciaB"
                     /locus_tag="SB799_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HEG0868262.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELK
                     QDKTTMLAILRRLIDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKEIIEKNNKILSTQFPNLDDAME
                     FLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEFAFENMIDQL
                     KIFASSEEEKAYIEYFEKLKLAFCEKDEDRVIKAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDENDFDVLKFGSEIKESFEHVYKNIGLEDCELEKEVLSNIE
                     KTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKKIFAFINFVYENAKTKPFMK
                     ISSEVFDKEFLDFGRNILFYQEKIWKRVYEVSTIGHEFGHIFFIANDTEKTMNQSGFF
                     KNIEEYKATTGGLINFFYHEQDDLIMPVFHELIKRAIGLISWQRVDEVRPYYTEGLIH
                     LSLLFESEVLIFENNNLKINFDLGHYEKFKELTLKNYHELAKHYALRLDAKEFLSRFC
                     EIKDNIFLPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFERYKKK"
     gene            8869..9165
                     /locus_tag="SB799_001015"
     CDS             8869..9165
                     /locus_tag="SB799_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEG0868263.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            9292..10191
                     /gene="cysM"
                     /locus_tag="SB799_001016"
     CDS             9292..10191
                     /gene="cysM"
                     /locus_tag="SB799_001016"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HEG0868264.1"
                     /translation="MKVHEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPVNLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEIIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(10198..10758)
                     /locus_tag="SB799_001017"
     CDS             complement(10198..10758)
                     /locus_tag="SB799_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEG0868265.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLAGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSITHSNMLYLIDEK
                     GHFYKEISDLNPQEILRELRIFLNSQ"
     gene            complement(10755..11207)
                     /locus_tag="SB799_001018"
     CDS             complement(10755..11207)
                     /locus_tag="SB799_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868266.1"
                     /translation="MRKIIFILAFAFVIVILYIIFDFYIIKDSKKITKADFSTPLTCD
                     LNVKDCTYSFNNKEVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLAACVLDTMRFRVEFMDNNKPIGFYFDFELKK"
     gene            complement(11211..11630)
                     /locus_tag="SB799_001019"
     CDS             complement(11211..11630)
                     /locus_tag="SB799_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEG0868267.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTDKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKIIELKNIDSKEF"
     gene            complement(11716..>11887)
                     /locus_tag="SB799_001020"
     CDS             complement(11716..>11887)
                     /locus_tag="SB799_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868268.1"
                     /translation="PKFNIVNGDILINFIGRSITDDSRFRVEFLNNNAPTGFFFDFDV
                     TMQKNFQTGNTH"
BASE COUNT         4079 a         1462 c         2123 g         4223 t
ORIGIN      
        1 tactacggaa ctcatcatgt tctaaagaat attaatcttt ctgttaaaga aggtgagaag
       61 cttgttatta taggtccaag tggaagtgga aaaagtacaa ctatccgttg catgaatggg
      121 cttgaagaag ttagttcagg cgaggtcgta gttaacaatc ttgttttaaa tcataaaaat
      181 aaaattgaaa tttgtcgaaa atattgtgca atggtttttc agcattttaa tttatatcca
      241 catatgacgg ttttgcaaaa tttgacctta gctccaatga aacttcaaaa aaaatctaaa
      301 aaagaagctg aagaaacagc ttttaagtat ttaaaagtcg taggtttagt ggataaagca
      361 aatgtttatc cagcaaccct ttcaggcgga caacaacaac gcgttgctat agcaagatca
      421 ctttgtacta aaaaacccta tattttattt gatgaaccta cttcagccct tgatccagaa
      481 accatacaag aggttttaga tgtaatgaaa gaaatttcac atcaaagcaa tactaccatg
      541 gtggttgtta cacacgaaat gggttttgca aaagaagtag cagataggat tatttttatg
      601 gaagatggtg ctattgtgga agaaaatatt cctagtgaat ttttctcaaa tccaaaaact
      661 gaaagagcgc gactcttttt agggaaaatt cttaaaaatt aaccaaaatt gaaaggagaa
      721 aaaatggttt ttagaaaatc tttgttaaag ttggcagttt ttgctctagg tgcttgtgtt
      781 gcatttagca atgctaatgc agcagaaggt aaacttgagt ctattaaatc taaaggacaa
      841 ttaatagttg gtgttaaaaa tgatgttccg cattatgctt tacttgatca agcaacaggt
      901 gaaattaaag gtttcgaagt agatgttgct aaattgctag ctaaaagtat attgggtgat
      961 gataaaaaaa taaaactagt tgcagttaat gctaaaacaa gaggcccttt gcttgataat
     1021 ggtagtgtag atgcagtgat agcaactttt actattactc cagagagaaa aagaatttat
     1081 aatttctcag agccttatta tcaagatgct atagggcttt tagtcttaaa agaaaaaaat
     1141 tataaatctt tagctgatat gaaaggtgca aacattggag tggctcaagc tgcaactaca
     1201 aaaaaagcta taggtgaagc tgctaaaaaa attggtattg atgttaaatt tagtgaattt
     1261 cctgattatc caagtataaa agctgcttta gatgctaaaa gagttgatgc gttttctgta
     1321 gacaaatcaa tattgttagg ctatgtggat gataaaagtg aaattttgcc agatagtttt
     1381 gaaccacaaa gttatggtat tgtaaccaaa aaagatgatc cagcttttgc aaaatatgtt
     1441 gatgattttg taaaagaaca taaaaatgaa attgatgctt tagcgaaaaa atggggttta
     1501 taatatgaat gaaagtgtag gttttgttga acatttaaga caaattctta cttcttgggg
     1561 tttatatgat gaaaatagta taagcccttt tgcggtatgg aaatttttag atgctttgga
     1621 taataaagat gcttttatta atggttttat ttatacttta gaagtaagca ttcttgcttt
     1681 gcttatagct acaatttttg gaactatagg cggagttatg gctacaagta gatttaaaat
     1741 tatcagagcc tacactagaa tttacgtaga gctttttcaa aatgttcctt tggtaataca
     1801 aattttcttt ttgttttatg ccttgcctgt tttaggtata agacttgata tatttactat
     1861 tggtgtattg ggtgttggag cttatcacgg agcttatgta agcgaggtgg ttagaagtgg
     1921 aattttggct gtgccaagag gtcagtttga agcttctgct tctcaagggt ttacttatat
     1981 tcaacaaatg cgttatatta tagtacctca aaccattaga attattttac caccgatgac
     2041 aaatcaaatg gtaaatttaa tcaaaaatac ctctgtattg cttattgtag gtggagctga
     2101 gttaatgcat tctgctgata gctatgcagc tgattatgga aattatgcgc cagcttatat
     2161 atttgcagcg gttttatatt ttataatttg ttatcctttg gcttattttg caaaggctta
     2221 tgaaaataaa ttaaaaaaag cacatttaac gagataaagg attgttaatg gaaaatgttt
     2281 ttaatgcaca aaatattgaa tttttaatgc aaggtttatt tctgacatta aaaatagcct
     2341 tagcaacttg tattatttcg attgtttttg gaactttttt agctataact aaaaattatg
     2401 gggatagatt aagtaaattt ttagcagctt gctatataga tatttttaga aatactcctt
     2461 tattattatg gatgcttgca gcttgttttg ttctacctgt attttttgga caatttcctc
     2521 aagctttttg gggtactata ggattttcac tttatacgag ttcggttatg gctgaaatta
     2581 ttagaggtgg attaaattct ataccaaaag gtcagtttga agcagcttat tctcaaggtt
     2641 ttggtaaatt ttttactctt ttttatatta ttttaccaca aacttttaga aaaataatac
     2701 ctgctttatt atctcaaatt gtaaccactg taaaggatac agcttattta gcgggtttag
     2761 gtatagctga acttacttat aattcaaaaa ctatattggc aaaactaaca agttttgaag
     2821 aaattttagc gatgataggt gttgttgcgg gaatttattt tataatatgt ttttcacttt
     2881 ctatgttggt aagatattat gccaaaaaga cagcttacat ttcttaaaaa agcttatatt
     2941 tttatataag ctttttaaat ttacagcagt ttttaacatt ttttttatta aaatcttttg
     3001 tattaattca taattttatt gattaaggtt ttttatgcga ggttataaaa ttttttcagg
     3061 ctcagctaat gtcgaatttg caagacaagt ttctaaatat ctctccctgc ctttaagtga
     3121 tgctggagta aagcggttta gtgatggaga gattagtgtt caaattgatg agagtgtacg
     3181 cggaaaggat gtttttatta ttcaaagtac ttgcgctcct acaaacgata atttaatgga
     3241 acttttaatt cttacagatg ctttgcgtcg ctcaagtgca aattcaatta cggctattat
     3301 cccatatttt ggctatgcga gacaagatag aaaagcaaat cctagagtgc caattactgc
     3361 taaacttgtg gctaatttga ttcaagcagc tgggattgat cgcgtagcta cgatagattt
     3421 gcatgcagga caaattcagg gtttttttga tattccagta gataatcttt atggaagtat
     3481 agtttttaat gattacatta aagccaaaca ttttaaaaat gctattatag gaagtccaga
     3541 tatagggggt gttgcaagag ctaggagtgt tgcaaagcat ttaggacttg atatagttat
     3601 agttgataag cgtcgtgaaa aagccaatga aagtgaagta atgaatatca ttggagatgt
     3661 aaaagataaa gaagttatct tagtggatga tattattgat actgctggca ctatagttaa
     3721 agccgcggaa gctttaaaag aaaaaggtgc aaaatctgtt atggcttgct gtactcatgc
     3781 agttttaagt ggaaaagcct atgagagaat agcaagtgga gctttagatg agcttgtggt
     3841 aacagatact atacctttaa aagagcaatt accaaatatt aaagtattaa gcgttacacc
     3901 tgtttttgct gaagtaatac gtcgtgttta tcataacgaa agtgtaaatt ctctctttat
     3961 ttagattaaa aaagcttaaa gattattttt aagcttttca tttttatgct acttaaagaa
     4021 acaaaaaaca tatatttttt taaaaatgtg aaaaaactaa acatctttct atacaattta
     4081 atctataaat ctgctattct ttgaaaatat tttattttct taggagaaat atgactcagt
     4141 taagtactaa aattttatgg ttgtttgttg caactttagg cgctatttgt tttggttatt
     4201 tagctttaca aaatggcgaa agtgtatcag cgatttattt ggtggttgct gctgtatgta
     4261 tttatatgat aggatataga ttttatgggc gttttgtagc ttataaggtt ttagaacttg
     4321 ataaaaatcg tgcaacacca gcacttgtag aaaatgatgg gcgtgatttt gtgcctacaa
     4381 ataaagctgt attatttgga catcattttg ctgctattgc aggagcaggt ccattagtag
     4441 gacctatctt ggccgctcaa atggggtatt tgccttctat gctttggatt ttagtaggag
     4501 gagttttagc gggtgctgtg catgattttg ttgttctttt tatatctact cgtagaaaag
     4561 gtagaagtct tggcgagatg attaaggatg agatgggtaa atttacaggt ggagttgcta
     4621 tggtggcgat ttttggcatt atgcttatta ttattgccat tttagctatg gtggttgtaa
     4681 aagctttagc agaatctcca tggggtttat ttactatcgc aatgactatt cctatagcaa
     4741 tatttatggg aatttatatg cgttttatcc gtccaggtag agtaggggag gcttctataa
     4801 taggttttgt gcttttaatt ttggctattc attatggtag tgttatagct gctgatcctt
     4861 attgggctaa aatatttact ttagaagctc caactttggc aattgttatg atggcttatg
     4921 gttttattgc ttctgtttta cctgtgtggt ttttacttgc tccaagagat tatctttcaa
     4981 cttttttgaa aatcggtgtt attgtggtaa tggctgtagc tattgttttg gttgctcctg
     5041 atttacaaat gccaaaagca aatactcagt attttgatgg aacaggtcca gtatttgcag
     5101 gtggagtgtt tccattttta tttattacca ttgcttgtgg tgcgatcagc ggttttcatg
     5161 ctttgatttc tagtggaact actcctaaaa tgcttgaaaa cgaaactcat gctttggctg
     5221 ttggatatgg ctctatgctt gctgaaagcg ctgtggcgat tatggcttta atttgtgctt
     5281 gtattttaca tccaggtctt tattttgcta taaactcaag ctctgctttg ataggaacag
     5341 atgttgtaaa tgtagcacaa accatttcaa gttggggatt tagtattact cctgaagaaa
     5401 ttactacttt aaccacaaat ataggagagc atactatact ttcaagaaca ggtggagctc
     5461 caacttttgc tataggtgta gctttgatct tgcatgaact ttttggcggc gtggatttga
     5521 tggctttttg gtatcatttt gctatattgt ttgaagcttt atttatttta acagcggtgg
     5581 atgctgggac aagggcttgt cgttttatgg tgcaagatat attgggtaat gtttataaac
     5641 ctttaggaga tattcataat tatccagctg gacttttggc tacggcttta agtgttgcag
     5701 gttggggata ttttctttat caaggtgcca ttgatcctaa gggaggaatt tatacgcttt
     5761 ggcctctttt tggcgtgagt aatcaaatgc ttgcgggtat ggctttgctt cttgctacaa
     5821 ctatacttgt aaaaatgggc aaggcaagat atacttgggt tactttagta cctgcggtat
     5881 ttgtcttagt ggcaactctg tatggaggaa ttcaaaaaat tatgccttat gaagaaggca
     5941 ataaagtagc aaatgcggta agtcatgtag ccgccgttag catacaaagt caaaaaatta
     6001 aagatttaga atttaaatta aataatacta aagatgaaaa agaaatttct acaattaaaa
     6061 aagaaatttc aatagccact caaaataaag ttggaaattt acttaatgca attctttgtg
     6121 tgttctttat gatagctacc ttgcttgtta taatttcttg tataggaatt tgcttaggta
     6181 aaattaaaat tcctcttaaa gaaactaagt atattaagat tgatgaattt caaaaaattt
     6241 aagtattatt atgaaaaagc cgaaaggttt tttcatccct tggtgggact ttctagttat
     6301 gataagtatt tagaacacat gaaacaaaaa catccaggaa aaattccaaa aaccagaggg
     6361 gaatttttca aagaatgtct agataaaaaa tataatagcg gcggtttaaa taaatgctga
     6421 taagcttaaa ggataaagtt ttatcataca aaataagctt taagcattta aaaagccatg
     6481 aattctttta agttcttcac taataggctt tttctttcca tctcttgtaa cacttacata
     6541 agttactaaa gccgaagtta cattaatgca agaagtacaa ccttgagaat ccactctttg
     6601 agctgtgact tctacttcaa cgctgattga agtgttgccc acatttacaa ctttagagta
     6661 acaagaaatt atatcgccta taaaaacagg ttctttaaaa actactttat ccatagagat
     6721 ggttacaacg cgttcaggag aaagttctct tgctgcgata gctcctgcta aatcgatttg
     6781 tgaaagtatc catccgccaa aaatatttcc tgctggattt gtgtcacttg gcatagctac
     6841 aatttttaat tttggttctc ccatatctct catttttact ccttatttta aaaaatgaat
     6901 tataattaaa aaagttaaaa aggagaataa aagtatgaat aattttaaag aaatagctaa
     6961 attggttaga aaatacaaag aaagaaataa tgcattatat gagtttttag acaaagaaga
     7021 tgtgggcgag tattttagat ctttgatttc tttaagtgag ttaaaacaag ataaaacaac
     7081 tatgctagcc atacttaggc gtttgattga tttaaaagaa gaaaatttag ttcaagagtg
     7141 gaaaaaaaac aactttaagg aagataagat tatagagtta aaacataagt tctatgaaga
     7201 ggttagaaag ttttatgaaa aagaacatca aaatttaatt aatgaaataa aagagaaaaa
     7261 gcttttaaat aatttttatc agtccttaat acaaggagtg cataatatag gtttaattat
     7321 gaatattttt gaaatttctt ggactaaaga aattatagaa aaaaataata aaattttatc
     7381 tactcaattt ccaaatttag atgatgcaat ggaattttta cgtaaaaatc atttatatca
     7441 aaaaactcca gaaggagaaa tttgtgagcg aagctatggt gttttagtta gaataggaaa
     7501 tttatggaaa tttgttcctt atgcgagatt tttcgagaat gaaattttaa aattagaatt
     7561 tgcttttgaa aatatgattg atcagcttaa aatatttgct agcagcgaag aggaaaaagc
     7621 ttatatagaa tattttgaaa aattaaaatt agcgttttgt gaaaaagatg aagatagggt
     7681 tataaaagct tggcaagaag ctgaatttgc ttggatgaaa gtaaaatcac ctttacaagt
     7741 gggacatcct ttagaatatt atgaagataa ttatactcat gcggtggcat tagaatggga
     7801 tataagaata gaagatgaaa atgattttga tgttttgaaa tttggtagtg aaattaagga
     7861 aagttttgaa catgtttata aaaatatagg acttgaagat tgtgaattag aaaaagaagt
     7921 tttatctaat atagaaaaaa ctcaacttta tatttgcact ccgatgatat tttatggtgc
     7981 tgaacttaaa ggtttattct cagctcaagt cgttccaaat gatgagtttg taagttctaa
     8041 ggcgggcaaa aaaatatttg cctttataaa ttttgtatat gaaaatgcta aaacaaagcc
     8101 ttttatgaaa atttctagcg aggtttttga taaagaattt ttggattttg gaagaaatat
     8161 tttattttat caggaaaaaa tttggaaaag ggtttatgag gtatcaacta taggccatga
     8221 atttggtcat atatttttta ttgctaatga taccgaaaaa acaatgaatc agagtggttt
     8281 ttttaaaaat atagaagaat ataaagctac tacaggtgga cttataaatt tcttttatca
     8341 tgaacaagat gacttgataa tgcctgtttt tcatgaactt ataaaaagag ctattggact
     8401 tatttcttgg caaagggttg atgaagttag accttattat acagaaggac ttattcatct
     8461 tagtttgctt tttgaaagtg aagtattgat ttttgaaaat aataatttga agataaattt
     8521 tgatttaggg cattatgaaa aatttaaaga actaacttta aaaaattatc atgaattagc
     8581 aaaacactat gctttaagac ttgatgcaaa agagttttta agtagatttt gtgaaattaa
     8641 agataatatt tttcttccta ttatgcctaa gtgtaaagaa tttgttaaat tttattatga
     8701 tttatacgag aaaattggca atgaaattga taatagcgga gaatttgaaa gatataagaa
     8761 aaaataataa agttttttga aaaaaactta aaaaaagctg ttttttactt gatattgttt
     8821 tttaaatatg ctaaaattag gcgtttcaat taaaacaaag gagcttttat gactaaagca
     8881 gatttcattt cattagttgc tcaaacagct gggctaacaa aaaaagacgc tactactgct
     8941 actgatgcag ttatttctac tattactgat gttttggcta aaggtgatag cattagtttt
     9001 attggttttg gtactttttc aactcaagaa agagctgcta gagaagctag agtaccaagc
     9061 acaggaaaaa caatcaaagt tcctgccaca agagttgcaa aatttaaggt aggtaaaaac
     9121 cttaaagaag ctgttgcaaa agcaagcggc aaaaagaaaa aataaaactt cggctagata
     9181 aattctagcc ttctttctta attaattcag atattttgta tcttttattt actttatttt
     9241 tttaaacttt tataaaacta tcattattaa acaaaaaagg atattaaaat tatgaaagta
     9301 catgaaaaag taagtgagct tataggaaat actcctatta tacatttgaa aaaatttggt
     9361 atcaatgttt ttgctaaatg tgaattttta aatcctagtc attctataaa agatagagca
     9421 gcttttgaaa tgattaaaga tgctttagat agtaaaaaaa ttaatcaaga tactacaata
     9481 gttgaagcaa ctagtggaaa tactggaatt tctttggcta tgatttgtgc agatttggga
     9541 cttaaattta ttgctgtaat gcctgaatct atgagtttag aaagaagaaa aatgataaca
     9601 ctctttggcg ctaggttaga attaactcct gtaaatttag gaatgaaagg agcggttgat
     9661 aaagcaaatg aaatattatt aaatactcca aattctttta tggtttctca atttgaaaat
     9721 atttcaaata aaaatgcgca tcgtaagaat acggctttag aaattttaag agatttggat
     9781 aatgaacttg atatttttgt agctggtttt ggaactggcg gtactattag tggagttggg
     9841 gaaatactaa aagaaaaatt agaaaaagtg catattgttg gagtcgagcc tctaaattct
     9901 ccattgctta gcaaaggtga agcgggaagc cataaaatac aaggaatagg ggcgaatttt
     9961 atacctgcta ttttaaataa agaaattata gatgaagtga tcacggtaag taatgaagat
    10021 gctataaata cagccaaaga acttgccaaa agtggtttaa tggtaggtat atcaagtgga
    10081 gcaaatgtat ttgccgcaag tatgctagca aagaaatttc cagataaaag aattttaact
    10141 atgctaaacg atacggctga aagatacctc tcaactgatc tttttgctta agtataatta
    10201 ttgagaattt agaaaaattc taagttctct taaaatttct tgtggattta aatcgctaat
    10261 ttctttataa aaatgacctt tttcatcaat aagataaagc atattgctat gtgttataga
    10321 ataacccata aaagaatcat ttagatctat tttttgatat tgaacattat attgttttgt
    10381 tattttttga agagtttttt catcttttgc aattaaagca tctgcttttg gataaaagta
    10441 tcgtaaccat tcgtttgtat tgcttaagtt attatctcta tttggatcta aagaaataaa
    10501 aagaaggtga gccttaggat tattgatttg ctttaaggct ttgcctgcta aactaagagt
    10561 tgctggacaa acatcagggc aataagtgta tccaaaatag ataataagct tatctccttt
    10621 aaaatctttt agggtggttt cctcttttaa gtctgatttt aagataaaat cataagaatt
    10681 ttgatgattt ttaataaaaa atattacacc taaaataatg gcaactataa ctataaacaa
    10741 aataatattt tttttcattt ttttagctca aaatcaaaat aaaaccctat gggtttatta
    10801 ttatccataa attctaccct aaaacgcata gtatctaaaa cgcaagcagc aagaactatt
    10861 ttactttcat agtctgttga atttaatcga tgtattttag gtttaatttc acccatatac
    10921 atatttaatc cataaatttt aattcctaag ttgttataat ttcctagatt tacaatcttt
    10981 agatttgtaa catctaaaga ttgtaagggt ttgggattta gggaaattaa gacttcttta
    11041 ttattaaaac tatatgtgca gtctttaaca ttaagatcgc aagtcaatgg ggtagaaaaa
    11101 tcagcttttg ttattttttt agaatctttt attatataaa aatcaaaaat aatatataaa
    11161 ataacaataa caaaagcaaa agctaggata aaaataattt ttctcattaa ttaaaattct
    11221 ttagaatcaa tattttttaa ctctatgatt ttatgattat taaattttaa atctaaattt
    11281 accttcgtgt ctttaataat aggttttttt agttttaaaa gcattatatg ataacctcct
    11341 gatttaagct ctgtgcttga atgagctttt ataataattt caggaatttt ttgcatcatc
    11401 atttttccat ctttatgtat atgtgtatgc agttcactga cttcactgat atcgcttttg
    11461 gcacttatta gagcaatatc cttatcagta ttattaaaaa tggtaagaaa aatagcacta
    11521 ttttgtgcat gaggtggagt ttgttttaca aaggcatttt ttacctctat atcattaaca
    11581 gcccaaagat ttacagcaaa aagagcacct aagagaagaa tttttttcat attgtatcct
    11641 tatttttata atattaaata tttgttcatt atatcaaaaa atatttttat ttgaatataa
    11701 aattttgaaa atttttcaat gtgtgttacc tgtttgaaaa tttttttgca tagtaacatc
    11761 aaaatcaaag aaaaaaccag ttggagcatt attgtttaaa aattcaaccc taaatctaga
    11821 atcatcggta atgcttctac ctataaaatt tataagaata tcaccattaa ctatattaaa
    11881 tttagga
//
LOCUS       DARBAC010000050        11620 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.050, whole genome shotgun sequence.
ACCESSION   DARBAC010000050 DARBAC010000000
VERSION     DARBAC010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11620
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.050"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            97..1431
                     /locus_tag="SB799_001021"
     CDS             97..1431
                     /locus_tag="SB799_001021"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEG0868269.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKESKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLDGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFMPKTEKSEKASKKEKEDK"
     gene            1431..2015
                     /gene="clpP"
                     /locus_tag="SB799_001022"
     CDS             1431..2015
                     /gene="clpP"
                     /locus_tag="SB799_001022"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEG0868270.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            2051..2578
                     /locus_tag="SB799_001023"
     CDS             2051..2578
                     /locus_tag="SB799_001023"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEG0868271.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            2575..4080
                     /locus_tag="SB799_001024"
     CDS             2575..4080
                     /locus_tag="SB799_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEG0868272.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFTSPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEVLMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFGKKRGQKEFNGKLKDEDLSRFCILEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN"
     gene            4082..4780
                     /locus_tag="SB799_001025"
     CDS             4082..4780
                     /locus_tag="SB799_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEG0868273.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            4764..6134
                     /locus_tag="SB799_001026"
     CDS             4764..6134
                     /locus_tag="SB799_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HEG0868274.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIKKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCQKEPDFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITLCMGALKEILLEDFAKEFVGRIKIANLGISSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANVSAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            6125..6691
                     /gene="purN"
                     /locus_tag="SB799_001027"
     CDS             6125..6691
                     /gene="purN"
                     /locus_tag="SB799_001027"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEG0868275.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCLCNKKD
                     AFGIQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            6763..7482
                     /locus_tag="SB799_001028"
     CDS             6763..7482
                     /locus_tag="SB799_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEG0868276.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            7475..7684
                     /locus_tag="SB799_001029"
     CDS             7475..7684
                     /locus_tag="SB799_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEG0868277.1"
                     /translation="MAKDANGTELNAGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            7694..8878
                     /locus_tag="SB799_001030"
     CDS             7694..8878
                     /locus_tag="SB799_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEG0868278.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFCIINAYNETLKIYKDLAKQYRYKMYV
                     IVFDNSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSSDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKIANQFCNFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDKKGFECIEIKNQIYK
                     KK"
     gene            complement(8891..10249)
                     /locus_tag="SB799_001031"
     CDS             complement(8891..10249)
                     /locus_tag="SB799_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEG0868279.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWILFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELSHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPIVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(10348..11547)
                     /locus_tag="SB799_001032"
     CDS             complement(10348..11547)
                     /locus_tag="SB799_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HEG0868280.1"
                     /translation="MFSSFFASKKWALWAYLGLFLLLFFLYIQTSLNVAINSWYSDFY
                     NVLQKPKIELLDSNSTQKIEENLENNTTLIQEANQRAEQNFQKANFINKGALYYYQNL
                     LEYFFNSRAMIEKPNYSANDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMT
                     FSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSLSD
                     VVSKALFANLSENSSFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQKA
                     EAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVI
                     VPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKEFE
                     KNISYKS"
BASE COUNT         4410 a         1543 c         1878 g         3789 t
ORIGIN      
        1 gcaattttat cataaattac tttaaaattt tatgcaagca ataaggaaaa atttgctatc
       61 attgaaagca aattttattt tataaggaaa aaaactatgg aagtaaaggc aaagcaacta
      121 gattctgtta atgcgactgc tagtgtaaaa attccttcag gaatgatcaa aagtgaagta
      181 gaaaatttag caaaaaaagc ttctaaaagt gtaaaaatgg acggttttag accaggaaaa
      241 gttcctgtaa gtgctgtact taaaagatat gaaagagaac tcactcaaga tgcagaacaa
      301 aatcttttta aatccgctgt aaatagtgct ttacaagaac ttaaaaaaga aagtaaagag
      361 cttgtaggtg agccatattt tgaaaaattt gatcgtaaag atggagaaat tattgctgag
      421 ttaatacttt cttttaaacc tgaaattaaa cttgatggtt atgaaaaact tatccctgaa
      481 tatcaaactc caaaagtaag taaaaaagaa attgatgaga aaaaagatga acttttaaag
      541 cgttttgcta ctcctgaagc tataaaaaca aaaagagctt taaaagaagg tgattttgca
      601 aaatttgatt ttgaaggttt tgtggatgat aaagcttttg aaggtggtaa agctgaaaat
      661 tatgttttag aaattggttc taagcaattt attccaggtt ttgaagatgg tatggtggga
      721 atgaaaatag gtgaagaaaa agatatcaaa gtaactttcc ctaaagaata cggtgcggcg
      781 catttagcgg gtaaagatgc agtatttaaa gtaaaactac atgagattca agagcttaaa
      841 attccagaac ttgatgatga aatgcttaaa aaacttttac caggagaaga aaaagctagt
      901 gttgaagttt tagatgaaaa attaaaagag caaatcaaaa atgaaaaact tttcaaactt
      961 gtaaatgatg aattaaaagg caaatttgca gatgctttga ttgaaaaata taattttgat
     1021 ttacctaaag gcatagtaga acaagaaact gatatgcaaa tgcgtgcggc ttttaatact
     1081 tttagcgaaa aagaaattga agagcttaaa gcaagtaaag aaaaatacca agaaaaacgt
     1141 gattctttta aagaagaagc gcaaaaaagt gtaaaactta cttttatcat tgatgagctt
     1201 gcaaaattgc gtaagattga agtaaatgat caagaattga ttcaagcgat ttattttgaa
     1261 gcatatcgct atggtatgaa tccaaaagag catttagaaa actataaaaa acaaggagct
     1321 ttacctgctg tgaaaatggc tttgattgaa gaaaaacttt ttaatgatat ttttatgcca
     1381 aaaacagaaa aatcggaaaa agcgagcaaa aaagagaaag aagataaata atgtttattc
     1441 cttatgttat tgaaaaatct agtcgtggtg aaagaagtta tgatatttat tcacgtcttt
     1501 taaaagatag aattattatg ttgagtggtg aaattcatga tgaacttgct gcttctatcg
     1561 tagcacaact tcttttttta gaagctgaag atcctacaaa agatatttat ctttatatta
     1621 attctccagg tggtgtaatt acaagtggtt ttagtattta tgatactatg aactatatca
     1681 aacctgatgt ttgtacgatt tgtataggac aagctgcttc gatgggagca tttttgctta
     1741 gttgtggcgc agaaggaaaa cgctttgctt tgcctaattc acgcattatg attcatcaac
     1801 ctttaggtgg agctagaggt caagccacag atattgaaat tcaagccaaa gaaattttaa
     1861 gacttaaaac tatacttaat gatattttgg caaaaaatac taagcaaaaa gttgcaaaaa
     1921 tagcaaaaga tacagaaaga gattttttca tgtcagcaca agaagctaaa gaatatgggc
     1981 tgattgataa ggttttggaa aaaagtttta aatgatttct ttggagatca tttaaaacaa
     2041 aggtttttta atggttagaa aaattatcac ttatcctaat cctagacttt ttttaaactc
     2101 tgaaattgta aataaatttg atacagaact tcacaccttg cttgatgata tgtatgaaac
     2161 tatgatagca agtaatggag taggtttagc ggctattcaa gtggatattc ctttgcgtgt
     2221 tttacttgta aatatttttg atgaaaatga tgaacaaaaa aaagaagatt tgctagagat
     2281 tatcaatcct gaaattattc ctttagatga agaaatgatc acttgtaccg aagggtgttt
     2341 gagtgtgcca gatttttttg aagaagtgaa acgctataat catatcttgc ttaaatatca
     2401 agatcgcttt ggagaattta aagaacttga agcaaaaggt tttttagctg tggctattca
     2461 acacgaaaat gatcatttga atggacattt atttatagaa aaaatttctt ttgctaagcg
     2521 tcaaaaattc gataaagaat ttaagaaaaa gaagaaaaat cataaaaaag agaaatgaaa
     2581 aaactaaagt gcataagctt tcatgaaggc ttagacatta tagaggtaga atccactttt
     2641 acaagaggtt tgccaaattt aagcatagta ggacttgcaa gtgtagcgat taaggaaagt
     2701 gtcgaacgca tcaaagccac acttttaagt tgtgattttg cttttcctgc taaaaaaatt
     2761 actatcaatc ttagtccttc aggcatccca aaaaagggat cgcattttga tttggctatc
     2821 gctttattaa tccttttgca aaatgaagaa ttagatgact tttttgtagt aggagaatta
     2881 ggacttgatg gaagtattaa aagcacaaat gagctttttt ctttgctttt gtttctctct
     2941 gctaaaatta aaaaagctaa aattgttgtt ccaaaaagta tagcacaaaa agcttccatg
     3001 ataccaaatt tagaggttta tggacttgaa aatttaaatg aagcaataga gttttttaaa
     3061 gaaaaaaatt atgaaaattt tcgtttttct cacaatcatc ctttattcac aagcccttta
     3121 caaatagaaa atgaaatttt tttacaaaat atggatttta aacttgattt taaagatatc
     3181 aaaggacagg aaaaagccaa aagagcttgt atgatagctg ctttaggtat gcataatatc
     3241 ttatttgaag gaagtccagg aagtggtaaa agtatgtgtg ctaaacgcct tgtttatatc
     3301 atgcctcctc aaagtttaag tgaagtttta atgcaaaatg cttatatgtc tttagattca
     3361 aaagattgtg aatttactaa aattcgtgct tttcgtcatc ctcatcatac ttctacaaga
     3421 gcaagtattt ttggcggagg aacaaaaaat gctagaattg gagaagtcgc acttgcaaat
     3481 ggtggagtat tgttttttga tgaatttcca cattttaaca agcaaatcat agagagttta
     3541 agagagcctt tagaggatca taaaattcat atttcaagag taaattctaa aatcacttat
     3601 gaaacaaaat ttagctttat agctgcccaa aatccttgtc cttgcggaaa tttattttct
     3661 aaaaatcttt cttgtgtttg tagtgaaaat gagattaaaa aatacaaaaa tcacatttca
     3721 gctcctatta tggataggat tgatctttat gtagctatgg atgagatcag caaggatgat
     3781 aaaacgagta taagttctaa agaaatgagt gaaaaaattt tacaagcttt tatttttggt
     3841 aaaaaacgag ggcaaaaaga atttaatggg aaattaaaag atgaagattt aagtcgtttt
     3901 tgtatactag aaaaagatgc caaagatacg ctagatttag caatttcacg ttataatctt
     3961 tctttgcgat cgcttaataa aattttaaaa gtttcaagaa gtatagcgga tttagaacaa
     4021 agtcttaata ttaacaaaac ccatatttta gaagctttaa gctttagagc aaggaattaa
     4081 aatggaaaat aaaagtatag ctatctttat agatgcagaa aatatccctg caaaatacgc
     4141 taaaagtatt tttgatatcg cttcagatta cggagaggtt atcattaaac gcatttatgg
     4201 ggattggact caaaaaaata tacaaggttg gagagagcaa attgctgaat attctttaat
     4261 cgctatgcaa caatttaatt ttgcagccaa caaaaactca agcgatatgt atttaatcac
     4321 tgaaatcatg tccatatttt atgaaaaaaa catagatatt tttgttattg tttcaagcga
     4381 tagtgattat acttcactca ttcaaaaatt aagagaaaat aaaaaacaag ttataggaat
     4441 ggggcttgaa aagtctataa aatcctatgt aaatgctttt agtgaatttt tttatttaga
     4501 taaagatgag agtaaaaaag aagatatttt aagtaaggat tatttaagag ctttaatcaa
     4561 tatcaccgaa cagcttatcg atgaaaaagg gcgcgctgaa tacgcacaaa tccgcactaa
     4621 tatgaaccgc aaatactcgg attttcatcc gcaaaattat ggttttaaga attttcgtgc
     4681 tttgatccag aaatttttac ccaaaatgaa aaaatttgaa gaagaaagag aaaaaaatat
     4741 atattttttg gtgaaaaaag attatgaaag ctattattga taatataaaa attttagaac
     4801 aaaatgctat aaataaaggc ttagatgagc ttattttaat ggaaaatgca ggattaaatt
     4861 tagccaagct gattaaaaaa gaagctaaaa aaattcgcat tcaacgcaag attaaaaaag
     4921 taaaaatact ttttttatta ggtgggggta acaacgcttc agatggcttg gtggctttaa
     4981 gaaatttaaa acacgctaaa gcttataaaa taggctttaa agaaaatacg ctttttaaaa
     5041 aacaagagca aattttacaa aattatgctt ttaaattttg ccaaaaagaa cctgatttta
     5101 agaaatttca tattattatt gattgtattt taggcacagg ttcaaatcgt tgtttagatg
     5161 aaaaaacaag tttaatcatt caaaaagtta atcaaagcaa agctttaaaa atagcttgtg
     5221 atatacctac aaatttggga ttttatcctt gttttaaagc tgatattaca ctttgcatgg
     5281 gagctttaaa ggaaatttta cttgaagatt ttgctaagga atttgtagga aggattaaaa
     5341 tagccaattt aggcattagc tctaagaaat tttaccctaa ttctcaagct tttttgcttg
     5401 aaaaaaaaga tttaaaaact atagatagaa aaatcaacgc caataaagga aattttggcc
     5461 atatttatat agttgccaat gtaagtgctg gaactttagc aggacttgga gccttaaatt
     5521 ttggagcagg tcttgtttct ttagtagcac aaaaaagttt ctcgcctctt ttgatgttaa
     5581 aagaaaaaat tgaaaataat gcaagtgcta ttgctttagg tatggggctt gaaaatttgg
     5641 attttctaaa agatgaaatt ttgcaaaaca ctcctttgat cttggatgca aactgctttt
     5701 taagtgaagc tttgctttgg tatttaaaca gaaaagatgt tgttataacc cctcatccaa
     5761 aagaatttat aaaactttat aaaatgtgct ttgatgagaa tttagatata gaaacattgc
     5821 aaaaaaatcg ctttttctat gctagaaaat tttcacaaaa ttatgattgt gttcttgttt
     5881 taaaaggagc aaatcctatt attgtgcaaa aagaaaaatt atttgttgta aatttaggaa
     5941 atcaagcctt agctaaaggt gggagtggag atgttttaag tggaatgatt gctgcacatt
     6001 taggttttgg ttttagtgct ttagaagcag caaaaaatgc tactttagct catggacttg
     6061 ttgcaaaaaa atataaattt aataaaaata gctttgacgc tttaaaactt atcaaaggat
     6121 taaaatgctt gtaaaattag ctgtactttt tagtggaaat ggaagtaatt tagaaaatat
     6181 tttagaaaaa cttcataaaa aaaccatagg ggaaaatacc tatgaagtag tactttgcct
     6241 ttgtaataaa aaagatgctt ttggtataca aagggcaaaa aaatttggtc ttgatactgt
     6301 cattgttgat cataaggctt ataatactcg tgaagaattt gatacgattt tggtacaaaa
     6361 aatcaaagaa agtggagcaa atcttactgt attagcaggt tttatgagaa ttttaagtcc
     6421 tgtttttaca aaaaatatta aggcaattaa ccttcatcct tctttattac ccctttttaa
     6481 aggagcacat gcgattaaag aaagttatga aagtgatatg aaagtggctg gtgtgagtgt
     6541 gcattgggtc agtgaagaac ttgatggtgg aatgattata gctcaaaaag cttttgaaaa
     6601 aagaaatttg agttttgaag aatttgaaga aaaaattcat agcctagaac atgaaatttt
     6661 acccttaagt gtgattgaaa ttttttctta aagaattaaa ggtatttgct ttaaaactat
     6721 aaaatatcgc tttaaaaaat tttaaaattt tcaaggaaat ttatgtttga atggatattt
     6781 agtattgatg cttggattac tttagctact ttaagtgctc ttgaaattgt actagggata
     6841 gataatatca tttttttagc tattttagta agcaaactac cccctgaaca tcgtgataaa
     6901 ggacgtatct taggtttagc ttttgcaatg attacaagaa ttttacttct tttatctctt
     6961 ttttgggtga tgaaacttgt aacacctttg tttagtgtat tgggcaatga aatttcagga
     7021 agagatctag ttcttttact aggtgggctt ttcttgattg taaagtctat taaagaaatt
     7081 aaagagcaaa tttctcatca agaagaaagt caaagtcatt ttaaagcaag caataaactt
     7141 tggatagttg tagctgaaat tgctgtgatt gatatagtat tttcacttga tagtgttatt
     7201 accgcagtag gaattgctca agatgtaacc atcatgatta tcgctgttat tatcgcagta
     7261 gctgtgatgc tttttgcttc taaacctata gcagattttg ttgaaaaata tccaagcatt
     7321 aaaattttag ccttagcttt tttggtgtta ataggcgtag ttttagttgc tgaaagtttt
     7381 gatattcata ttgataaggc atatatttat accgctatgg cttttgcttt agtggtgcaa
     7441 attttaaata ttttagatca aagaaaggaa aaaaatggct aaagacgcta atggaacaga
     7501 acttaacgca ggtgatagcg tgagtgtgat aaaagatctt aaggttaaag gtgcaagtac
     7561 aactttaaaa cgtggaacta ctataaaaaa tattaagctc acttctaaag aaggtgaaat
     7621 tgaggctaga gtagataaat ttggcgttat tgttttaaaa actgaatttt taaagaaaat
     7681 ctaggcaaag aatgtgcgaa tcttacttgt tttaagaggg aattattacg caggacaaga
     7741 agaatttatc aaaaataata aacttcaaaa ttatacactt gatttaaatg ctttgcgtct
     7801 tttatcagga agcgttaaaa atatagtcag tgaatataaa attttaaatg ttaaaaatga
     7861 tgaagatttg agtaaaattt tactcaaact tctagaaatg cgtatgcaaa aaggtgagtt
     7921 ttgcatcata aatgcttaca atgaaacatt aaaaatttac aaagacttag ctaaacaata
     7981 tcgctataaa atgtatgtta ttgtttttga taactcttta aaacaatgtc aagaaaaaaa
     8041 tcttttagaa gctaaaaaaa atggatatat catcccttat gctcttttgg aaaaaactca
     8101 agatttactc aaaaaaaatc caaaaaaata cccaatttta gactcgagcg actggaaaaa
     8161 atgtctttac caaatgccaa atttaagcaa atataaaaaa attcatcata taggagattt
     8221 acaaggttgt tatagtgttt taaaagaata cattaaaaca atcaaagaag atgaatttta
     8281 tatatttttg ggagattata tcaacagagg tatagaaaat ggcaaagtaa taaaatttct
     8341 tttaaaaatt tgcgaaaaag aaaatgtatg cttattagaa ggaaatcacg aaagacatct
     8401 tataaaatgg gctaatggag aattgtcaaa ttccaaagaa tttaatgaaa atactttaaa
     8461 ggattttaga aaagaaaaac ttactccaag agatgctaga aaactctatc ctcatctaaa
     8521 agaatgttta tactacaaat tccaaaataa attcatattt tgttcacatg gaggagtaaa
     8581 ttttataccc tccaaacctg aaaaaataag ttttatacca agccatgatt ttatttatgg
     8641 tgtaggtgga tatgaagaca gtcaaaaaat agcaaatcaa ttttgtaatt tcacctcgga
     8701 caatctttat caaatctttg gacacagaaa taaagaaaaa cttcctatga aaatagccaa
     8761 aagagtattt ttatgcgagg gtaaaataga tgatggtgga tatttacgcg tagttacact
     8821 agataaaaaa ggttttgagt gtatagaaat taaaaaccaa atttacaaaa agaaataagc
     8881 ctaaagaggc ttattcttca tctttatttg tttttttaac caccttaaca cgctctatag
     8941 aattcccatc cattttttta acttcatagt aacaaagttc atcttcaatg cgatctccta
     9001 ctataggcaa gcgtcctaaa agattaaata catatccacc tatagtaact tgttctaaat
     9061 cctcatcata gtttattaca agcatttctt caacagtttc tatatcgcat cgtccttgaa
     9121 attcatagat attttcagca agttttttat agctgtcttc ttcatgctcg cttttaattt
     9181 cgccaataat ttcttccatg atatcttcca tggttaaaat tccagcagtt ccaccatact
     9241 catcaactac taatgcagta tgagagcgtt ctttattcat cattacaagt acttttgaaa
     9301 tactgatatt ttcaggaact aaaatcaaag gtttaacaaa agtatctaaa ttttgacttt
     9361 tatggcttaa ttcattttgt attatatctc gtatgtgtat catccctaaa atagtatctt
     9421 tagaaccgtc aatataagga aagcgagtat gtttatgttc acaaatgatt tgcatatttt
     9481 cttcgtaact tttttgttta tttagacaaa tcatatcttt tctaggagtc ataatctctt
     9541 tagcaacagt atctgaaaaa tcaacagcat tgcgtatgat ctctgtttca aattcatcta
     9601 aaactccacc tttttgactc tcacttgcta tgattttaat ttcttcttcg ctatgagtta
     9661 gctcgctttc tttagcaggt tttattccaa aaagtttcaa acttatagct gctaaaaaat
     9721 cgaaaatttt aatacaaggc aaaaagagta tccaaaacca atgaagaggt ctagctataa
     9781 ataaaaccgc tttatctgca actgcaatag ctatactttt tggcacaagt tctcctaaaa
     9841 ccacatgtaa aagagtaata atactaaaag caataataaa agctatagta tggataataa
     9901 cagtgctaaa accaagatta ataagcggaa tttctagcat ttttgcaata gcaggctcac
     9961 ctatccaacc aagagctaga gaacttaaag tgattcctaa ttgacaagca ctaagataag
    10021 tatcaagtct tgaagtaacc tccaaagctt tcttggcacc agcttttttt tcttttacca
    10081 tctcttcaag cttggaacga cgtactttaa caatactaaa ttcagacaaa acaaaaaaac
    10141 catttaaaaa cactagagca agtgcaacaa caaccataag tatagaatat cctgcatcaa
    10201 aagatgctgt agaagtttgg tttaaatcca aaacctgact ggggtccaat gaagctcctt
    10261 aagaaataaa atattattaa accttattat acacaattaa aagtaaattt aatatttgaa
    10321 ttttttcttg tattttataa gaaaaaacta agacttataa gaaatatttt tctcaaattc
    10381 ttttaaacgc ttatatatac ttctaagttg agtgatagtt gtccagtttg tgataaaaac
    10441 actaaaagag cttcgtactt gatcaaaagc attgttaatc tgcattacaa taccaagtcc
    10501 tatagctccg gcaaaaagcc ctggtgccat gattaaaaat ggcactataa ctatcatttg
    10561 ctcaaataaa atgagccaaa tattaaaata tccataatgt aaaaaaagtc ttttatagtt
    10621 aaatttaagc cctgtaaaaa gctctatcat agtctcattt ttagcgtatt ctttgcgatt
    10681 atcctcagca taaacaagct cttttctaaa agctgcttca gctttttgat tgttatattc
    10741 aagtccagga agcttaatac ctacaaacca cgacacaacc aagcctccta aagaaatcaa
    10801 aagtgcaata taaacaagca aaccatcaat gttttttaaa aaataaaaag aagaattttc
    10861 gcttaaattt gcaaataaag ctttactcac aacatcactt aaactccata aaatcgggat
    10921 aaatgctaca agggtcatca aagcttttat aaaactaagt cctaaactct ctacgatttt
    10981 agaaaaatta taagtatctt cttgaattct ttgcgaactt ccttctatat tatcatcttt
    11041 atttttccaa aattttaaat aagaaaaagt catagcctca cgccacttaa aagcatagac
    11101 gctagcaaaa tagatattaa tcgtagcgat taaaacataa ggaatagcaa tagccaaaaa
    11161 aactaaaatc aaagcataaa aatcatttgc tgaataattt ggcttttcaa tcatagccct
    11221 agagttgaaa aaatattcta ataaattttg ataataatac aatgcacctt tattgataaa
    11281 attagctttt tggaaatttt gttcagctct ttgattagcc tcttggatta aagtggtatt
    11341 attttcaaga ttttcttcta ttttttgcgt agaattagaa tccaaaagtt ctatttttgg
    11401 cttttgtaaa acattgtaaa aatcactata ccatgaattg attgcaacat ttaagcttgt
    11461 ttgtatatat aagaaaaata acagtaaaaa aagccccaaa taagcccata aagcccattt
    11521 tttacttgca aaaaatgaag aaaacatgct accacctttt aaaagaaaaa ttttaatcaa
    11581 ctttatttaa tcaagagttt attaaaaatc ataaatttat
//
LOCUS       DARBAC010000051        11556 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.051, whole genome shotgun sequence.
ACCESSION   DARBAC010000051 DARBAC010000000
VERSION     DARBAC010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11556
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.051"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(43..1164)
                     /gene="tgt"
                     /locus_tag="SB799_001033"
     CDS             complement(43..1164)
                     /gene="tgt"
                     /locus_tag="SB799_001033"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEG0868281.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITYHKSMQNKGIGIGQNIFGIIQGGTDYKERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINDHEAIDPACSCYTCCNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
     gene            1194..2594
                     /locus_tag="SB799_001034"
     CDS             1194..2594
                     /locus_tag="SB799_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HEG0868282.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDVGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGRNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            2640..3695
                     /locus_tag="SB799_001035"
     CDS             2640..3695
                     /locus_tag="SB799_001035"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEG0868283.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAREIFIAAVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESSFLK
                     TLSSRELAAGMAEFIKMAAMFDDSMLDFIEKIDEKSFLNATCENEIFTQIIARSIELK
                     SRVVEQDEKESGLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGF
                     LDKMQSQKIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLAGPLGKGLI
                     KGDISKEDIIATLREFQ"
     gene            3692..5263
                     /locus_tag="SB799_001036"
     CDS             3692..5263
                     /locus_tag="SB799_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HEG0868284.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
                     KELVGLKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQ
                     SLRAVNILVAIVIVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIG
                     DIIDISFLRITLYEELTLETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGI
                     DISVTFDSNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFF
                     EHWGMRISAWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHF
                     EQHHENMHFHARNKD"
     gene            5260..6510
                     /gene="mtaB"
                     /locus_tag="SB799_001037"
     CDS             5260..6510
                     /gene="mtaB"
                     /locus_tag="SB799_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEG0868285.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRL
                     GSLEPAQIDESFLEILDETWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEEVWQEALKKFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNILKSIVEKNNYEFRKKNQVPLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIFISQYEAQEKSNFANLKG"
     gene            6514..8130
                     /locus_tag="SB799_001038"
     CDS             6514..8130
                     /locus_tag="SB799_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEG0868286.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLAKVPVEVKKDNTLWVFFILLVFIIAL
                     FISLGYFARKKELAKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNVNLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNDEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLEEPNLNEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEHDDVKNIMQV"
     gene            complement(8138..8554)
                     /locus_tag="SB799_001039"
     CDS             complement(8138..8554)
                     /locus_tag="SB799_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEG0868287.1"
                     /translation="MKIKFLSIITILSLSLNADIIISADNLPSVSKEFLQHNFKAPIG
                     IVQKDKNSYEVYLSDGTELEFDIDGAWKEIENKAFPFDLDFLPQNLANIIKNEFPNIK
                     AREIERKINHYKIKLDNDVKILIDFNGTILHKEIDD"
     gene            8652..9170
                     /locus_tag="SB799_001040"
     CDS             8652..9170
                     /locus_tag="SB799_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEG0868288.1"
                     /translation="MLTIFLIFLNILCYFLISYDYYNILGLNILFFNGAYWQLLSSMF
                     LHGNLTHLILNMIVLFQFGRILETYLGALRFIFIYFIGGLLCSLLSVFYVYFDFKYFG
                     ENINVIGASGAICVLMGFYAVLDKNSTKGLIVAILLMSFAPLLMGVNVAWYGHIFGFM
                     CGYILAKIKEVK"
     gene            9167..9679
                     /locus_tag="SB799_001041"
     CDS             9167..9679
                     /locus_tag="SB799_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEG0868289.1"
                     /translation="MKKIYIIRHAKASKSGDIDDFERKLTKSGKEDLKKLFKNLALHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNKICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPGLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(9694..>11556)
                     /gene="rpoD"
                     /locus_tag="SB799_001042"
     CDS             complement(9694..>11556)
                     /gene="rpoD"
                     /locus_tag="SB799_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEG0868290.1"
                     /translation="AKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQAL
                     MKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDS
                     PVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINR
                     ERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELESDEENTKKNSKKEDERTLKVI
                     EKFKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVK
                     SMETALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALETTM
                     VSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVV
                     SIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQ
                     ARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITKEP
                     ISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIRMR
                     FGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
BASE COUNT         3947 a         1438 c         1925 g         4246 t
ORIGIN      
        1 gcttgtagga ttttttttag attttcgtgt agttctagca ttttatttgc ctcttaagtg
       61 ataaaaattt cttttaaatt gcgtaaaaga attattcaaa attgcttcac gcatctttct
      121 tgcaagttca agataataat gtagattgtg caaacttgcc aaacgaaaaa aagtaagttc
      181 tttagctttg aaaagatggt ttaaataacc ccttgaaaaa ttacaacaag tataacatga
      241 gcaagcagga tctatggctt catgatcgtt gataaattct gcttttttga tattaaattt
      301 tccaaaactt gtgaaaaatg ttccatttct tgcatttcta gttggcatca cgcagtcaaa
      361 catatctacc cctcgctcaa cattttctac taaatcttca ggagttccta cgcccattaa
      421 atatcttgga cgattttcat ctagataagg gtttaagttt tggactgttt cgtacatcaa
      481 ggcgttttct tcgcccacgc taagcccacc tatagctaaa ccatcaaatg gcatttcatt
      541 taaacttaaa gcacaacgct ttctttcttt gtaatctgta ccaccttgga taataccaaa
      601 aatattttgc cctataccta tacctttatt ttgcatactt ttatgataag taatagcctc
      661 ttttgcccaa agtatagtgc gatcaacaga aattttaacc ctttctttgg ttgcgggtag
      721 ggctactaaa tcatctaaaa tcatcataat atcagaatta aaatcatatt gagtatctaa
      781 aacacttttt ggagtaaaaa gatgacgact cccatcgatg tgacttttaa attctatacc
      841 ttcattaaaa tgtttagaat ttttacttaa agaaaaagcc tgaaaaccac cactatcggt
      901 taaaaaactt ctatcaaatt tcgtaaaacc atgcaaacct ccaaaatctt ttaccacttt
      961 ggaagttgga cgcaagtaca tgtgataggt atttgctaaa ataatttttg catcaagctc
     1021 atttttcata tcattggcat caagactttt aaccgctcct actgtgccaa caggcataaa
     1081 aacaggggtt aaaaaagtgc tgtgtgcggt agtgatttca caaacccttg ccattccatc
     1141 tttatgcttt aatttaaatt ccatttgtta taatttcctt tttggagttt aaaatgaata
     1201 atattttaat tataatagac ggtattttag caaagcattt cttagaaagg ctttgttttg
     1261 aaaaaggctt aggttacttt tttacagtag tgtgtcaaaa tagtgaaaaa aataacttaa
     1321 atatttctag tgagtatatt gacttgcatt attttgatcc tacaagcaca gcgcgtcttg
     1381 aaaatattat gagtaaagat tttaaacagg cttttattta tatgcaagat gaatttgaaa
     1441 ctaaaaaaag ttatgaggct ttgcgttctt taaatccaaa tttagaaata gaaataatgg
     1501 atttttgggg gttaagtgtt aatgatactc atgcaaattt agctgatgct agaatgactt
     1561 taagccgtag atttatggat tttttaccag atattgcttt aacagctcag tatataggac
     1621 ttggggttgg agagattatg gaagtaaaaa ttccagcagg gtctattttt gcttataggc
     1681 acataagttc aatacaacaa aaaaggtggc gcatagtcct tatttataga aattctaaga
     1741 tttattttgt aaaaccatct tttgttttag agccaaatga tagcattttg atcgttggag
     1801 atcctgttgt tttacaaagt atttttcata atataagagg caaagcaggg caatttccta
     1861 tgccttttgg aagtaatgtt tttgctttaa ttgatatgaa aaatatgaat caaaatatgc
     1921 aagaaagagt gcttgatact actttaaaat taactcaaaa aagcaatgca aaaagatttt
     1981 ttatacatgt tatcaatcct aaattagggg taatgtatga aaaattaaaa aaactttctg
     2041 aggataaaga aggtgtgttt tttgattatt tcaacacgga ttttaaacaa atttccacat
     2101 ggttgcaaaa taatgatgta ggattagttg taaccgatat aaaaaatttt gagaaagaaa
     2161 aacaagcttt ttttgattta aaaattccta ttatgaaagt gggtgaagct tcttttgatg
     2221 aacttaaaga agcgattatt ttaagtgctg atgagagtga acttgaaaac aatgcaaatg
     2281 tcattactga tttaagtaaa cagcttgatt ttggagttat tttatattat tataatccaa
     2341 attctcaaaa tactacagat atggaggagt attttagaag tttatctaag ctttatgata
     2401 aaaatataca aattattaat aaaaatgatg aaaaccctct tttaaatttg caatatcgcg
     2461 aagatttgtt acaatttgtg agttttcaaa aagaattact aaatagagat tttggcagaa
     2521 atttaagtac aaatttaaat aggcattatt ataaaatgag acaaaattac caacttttca
     2581 taccggtaga ataaataatt aattaaatgt gatagaataa acgcaaaaag agtagttcaa
     2641 tgcaagtaga agttaagtta aaagaaaatg cttataaggt ttatattgat gaacttgaag
     2701 aattagaatt tgatagtaag gtttttatac tttcaaatcc taagatttca ggtcttcatt
     2761 tgaaaacatt actttctaaa attaaggcaa gagaaatttt tattgccgct gtaaaagatg
     2821 gtgaagaata taaaaattta agcaccatgg aagaaatttt aaaccaaatg tttaattcta
     2881 aattggatag aaaaagcgtg cttataagtt ttggtggtgg cgtgattagt gatatgggcg
     2941 gatttgctgc tagtatttat caaagaggca ttgattttat aaatattcct actacacttt
     3001 tagcttgtgt tgatgcagca gtaggtggaa aaacaggtgt taataataat tttggtaaaa
     3061 atcttattgg cactttttat caacctaaag ctgtatattg tgagagttct tttttaaaga
     3121 ctttgagctc tagagaactt gctgcaggca tggctgaatt tattaaaatg gcagcaatgt
     3181 ttgatgatag tatgcttgat tttatagaaa aaattgatga aaaaagtttc ttaaatgcta
     3241 cttgtgagaa tgaaattttt actcaaatta tagcaagaag catagaactt aaatcaaggg
     3301 ttgttgaaca agatgaaaaa gaatcagggc ttagaatgct tttaaattat ggtcatactt
     3361 ttgctcatgt tatagaaaat tttacagatt ataagcttta tttacacgga gaagcggtgg
     3421 ctataggtat ggttatggca aatcaattgg ctttaaattt aggatttttg gataaaatgc
     3481 aaagtcaaaa aataaaagat attttactta aattcggttt gccaatatca tataaaatca
     3541 acaatgtaga tgaattttat gaagcttttt tcatggataa aaaaagctct aataaaaaaa
     3601 tcaattttgt tcttgctggc cctttgggta agggtttgat aaaaggtgat atttctaaag
     3661 aagatataat tgcaacttta agagaattcc aatgaaaaaa attattattt taaccttttt
     3721 tgttgttttt gcttttggtg atgtaaatcg gactattatt aataatataa atgagaaaat
     3781 taatacttta aatactgtaa tcagtgctag tatttggaat atacgttatg aaaattttat
     3841 aaaatatcaa gatataaatg atgaattaat cattttaaat cttaatttaa aaaagacttc
     3901 cgatattcac caacaagaag aacttaaacg caagatagca aatttagaag agcaattgag
     3961 cttgcttaaa gaatataaag atttaaattt tgcacaaagt cttagtgccc ctgataatat
     4021 agaaacttta tctaagctta ctaatccttt ggctattata ggagcttttt ctcatattaa
     4081 gaaattaaaa ggagaaaagg aagagtatat atttaaattt aatgatttta aaaatttagt
     4141 agataaaatc agggaaaaaa actcagaact taaggaatta gttgggctta aaccaagtgt
     4201 tgagaatata gaagctttaa aagcttcgga taaaaagttg gaagaatttg agcaagcttt
     4261 aaattttgct agtgtttctt attctgttta tgagaaaaaa attgatgaag agctttctcg
     4321 agtaagtgct gagattaaag ttcaaagctt aagggctgta aatatacttg ttgctattgt
     4381 tattgttata gctatagctt ttatgttgaa atttattgct aaaaaatata ttaaagatag
     4441 tgaaagatat tatactgcta cgaagattat taattttatt aatataaata ttatttttct
     4501 tattttgctc tttgcttata tagaaaatat tacttatctt gtaactatac ttggttttgc
     4561 ttctgcaggc ttagctattg ctatgaaaga tatgtttatg tctatgcttg gatggtgtgt
     4621 gattattttt ggcggaagtt ttagagtagg ggatcgtgta aaagtttttc aaaatgatac
     4681 tacctatata ggagatatta tagatatttc ttttttacgc attactcttt atgaagagct
     4741 tacgcttgaa acttataata aaaatcgtcg tagtgggcgt attatattta ttcctaataa
     4801 ctatgttttt acaaatttgc ttgctaatta tactcatcat ggtatgaaaa ccgtgcttga
     4861 tggcattgat ataagtgtta cttttgatag caatcttgat aaggcacaag aaattgtgga
     4921 aaatattgtg acacgtcatg ccaaaggtta tactgagctt gctagaaaaa atatagctcg
     4981 tttacaacat gaatatagta ttaaaaatcc taaagtggag ccaaggtttt ttatgttttt
     5041 tgaacattgg ggaatgcgaa tttctgcatg gtatatgacc aatgcttatg cggctttagt
     5101 attaagaagt acgattagta aagagattat aaaagaattt aataagcata aagatataaa
     5161 aattgcttat ccatcgcaaa atttatattt aggaaattta aatcaaaatc attttgaaca
     5221 acatcatgaa aatatgcatt ttcatgcaag gaataaagat tgaaagaaaa agtttttttt
     5281 aaaacctttg ggtgtcgcac aaatatttat gatacagagc ttttaaaaag ttatgtaaaa
     5341 gattatgaga ttataaatga tgagaataaa gcacaaatta tcgttgtaaa ttcttgcacg
     5401 gttacaaatg gagctgatag cgggataaag tcttatgtaa ataccatgca aaaaaaaggc
     5461 attaaagtta tacttacagg ttgtggtgct gtaagcaaag gtaaggagct tttagataaa
     5521 aaacaagttt ttggagtgct tggagcgtca aataaagata aaatcaatga atttttagga
     5581 gcaaagacaa gtttttatga acttggaaat ttaaatttta ttgataaaga tatagtttgt
     5641 gagtatgaaa atcataccaa agcttttgtg aaaattcaag aaggttgtga ttttgcttgt
     5701 tcttattgta ttatccctag cgtgcggggt aaatcaagaa gtgtagatga aaaagctctt
     5761 ttaaaacaag ttgaaatttt gggggctaat ggctatagtg aaattgtttt aacagggact
     5821 aatataggtt catatgggct taaaaatggc acaagtttag gcaagctttt gcaaaaaatg
     5881 ggacaaattt caggtataaa acgcataagg ttaggtagtt tagaacccgc acaaattgat
     5941 gaaagttttt tagaaatttt agatgagact tggcttgaaa ggcatttgca tattgctttg
     6001 caacatacaa gtgaaaaaat gcttcgcata atgcgaagaa gatcgcatac ggataatgat
     6061 ttaaagcttt ttaatactat agcaagcaaa ggatatgctt tagggacgga ttttatagta
     6121 gctcatccag gcgagagtga agaagtgtgg caagaagctt tgaaaaaatt taaagaattt
     6181 ccactcactc atattcatgc ttttattttt agtcctagaa acaacacgca ttctgctacc
     6241 atgaaagatg tgataaatgg aactttagct aaagaaagat taaacatttt aaaatccata
     6301 gtagaaaaaa ataattatga atttagaaaa aaaaatcaag ttccgcttga agttttggtg
     6361 gaaaatcaaa aagatggttt ttttgagggg tatgatcagt tttttaacaa gatcaaaatt
     6421 aaaagtgata aagatatagc taaagaatgg atctttatat ctcaatatga agcgcaagaa
     6481 aagtctaact ttgcaaattt aaaaggctag ataatgaaaa ataaaaagat aattttagca
     6541 tcttttatgg ttttatgtat gcttttggga attttatatt ttaaaaatga acctaaatat
     6601 atagatgaaa atctttatca aagtctgtta agtcaaaatt taatccaaaa agctgtgatt
     6661 gataaagacg aaatttggct taaggcggaa ggtgaaaatt acgtaattat aaaagatggc
     6721 atagatataa aaacactttt agcaaaagtt cctgtagagg ttaaaaaaga taacacgctt
     6781 tgggtgtttt ttattttact tgtttttatt atcgcacttt ttataagtct tggctatttt
     6841 gctcgtaaaa aagagttagc taaatatcca atatcaaata agaatcaaaa tcacactcaa
     6901 gctcaaaatt caaatataaa tttagaaagt tctcatataa aacctgtgat ttcaaatatt
     6961 acttttaatg atgtagcagg tgttgatgaa gttaaaatgg agctaagcga acttgtggat
     7021 tttttacaaa atcctaaaaa atataaagaa tttggtgtaa aaatgccaaa aggtgtttta
     7081 atggtaggcc cacctggtgt aggaaaaaca ttgatagcaa aagcagttgc aggagaagca
     7141 ggggtgccat ttttttatca aagcggttca agttttgttg aaatttatgt aggtatgggt
     7201 gcaaaaagag ttagagagct tttttcaaaa gctaaaatga tggctcctag tatagttttt
     7261 atcgatgaaa tagatgctgt aggtaaggca agaggagaaa tgtcaaatgt tgaaagagat
     7321 agcactttaa atcaactttt aactcaaatg gatggttttg aggataatag tggggttata
     7381 gttatagctg cgacaaataa aatcgaactt atggatcctg ctttattgcg ttctgggcgt
     7441 tttgatagga gaattttttt atctttgcct gattttaagg atagacttaa aattttagaa
     7501 atttatatga aagataaaaa caataatgtc aatttaaata aaatcgccaa agcaagcgta
     7561 ggttttagtg gagcagggct tgaaactttg gtaaatgaag cagcaattaa tgctttaaga
     7621 agaaatagtg ctttagtcga ggaaagtgat ttttatgctg tattaaataa agttctttta
     7681 ggcaagaaaa agattttaag ttttaatgat gaagagaaga aaattcaagc cacttatcag
     7741 gctgcaaaag ctttgagtgc gtattatttt gacataggat ttgaaaaaat cactctcatt
     7801 gaagatcgtt ttaaagaata tgagcataat ataagatcaa aatcagagct tatcaatcgt
     7861 ataaaagttt atttggctgg ttctagagct atgagattga tttataatga aagttatact
     7921 aactcgcaag atgatttttt aaagattaaa gaattgcttg attatatgtt gagttttgat
     7981 atgttagaag agccaaattt aaatgaacaa aaaaaagaaa tggatgaatt tttaaattct
     8041 atgaaggata aaattttaaa attatcagag cttttgcttg aaaaagaaaa gatagaacat
     8101 gatgatgtta aaaatataat gcaggtttga ttatatttta atcatcaatt tctttgtgca
     8161 agatagttcc attaaaatct ataagaattt ttacatcgtt atcaagttta atcttgtaat
     8221 gattgatttt tctttcgatt tctctagctt ttatatttgg aaattcgttt ttaatgatat
     8281 tggctaaatt ttgaggtaaa aaatctagat caaaaggaaa ggctttattt tcaatttcct
     8341 tccaagctcc atctatgtca aattcaagtt ctgtcccatc gctaagatag acttcatagg
     8401 aatttttgtc tttttgtacg atccctatgg gtgctttgaa attatgttgt aaaaattctt
     8461 tagaaacact tggcaaatta tcagcagaaa ttattatatc agcatttaaa gataaactta
     8521 aaatagtaat aatacttaaa aatttaattt tcaatatttt tcctaattat tttttagtaa
     8581 aattgtaaag aatttatgtg aattttatgt gaattttaag acaatattat aaaaaataaa
     8641 ggttttatac tttgcttaca atttttttaa tttttttaaa tattttatgt tattttttga
     8701 tttcttatga ttattataat atccttggtt tgaatatttt attttttaat ggagcttatt
     8761 ggcaactttt aagttcaatg tttttacatg gaaatttaac tcatcttata ttaaatatga
     8821 tagttttgtt tcaatttggg cgtatattag aaacttattt aggtgctttg cgttttattt
     8881 ttatttattt tattggcgga ttgttgtgtt cacttttaag tgttttttat gtgtattttg
     8941 attttaaata tttcggagaa aatataaatg tcataggcgc tagtggtgca atttgtgttt
     9001 taatgggctt ttatgctgtt cttgataaaa atagcacaaa aggacttata gtggcaattt
     9061 tacttatgag ttttgcgcca ttgcttatgg gggtaaatgt tgcttggtat ggtcatattt
     9121 tcgggtttat gtgtggttat attttagcta aaataaaaga ggtaaaatga aaaaaattta
     9181 tattataaga catgcaaaag caagtaagag tggggatatt gatgattttg aaagaaaact
     9241 tactaagagt ggaaaggaag atttaaaaaa actttttaaa aatcttgcct tacatgaaat
     9301 tcatcctgat ttggtgctat caagtcctgc tgttagaacc gctaaaacag cgaaaaaaat
     9361 agccaaattt tataattttg ataaaaataa aatttgtttt gatgaaagat tgtatctttg
     9421 taatgttgaa aatttgctaa aaattctgca agatattgat gatgagttta acgaagtatt
     9481 tttagtgggt cataatcctg gtttaatgga gcttggagag ttattaagct cgctatgttt
     9541 agcttctttt ccaacttctt ctatcttgtg tttagaattt gatattaagg aatttaaaaa
     9601 tttaaaaaaa catagcggaa aattagtttt ttttgaacat gtgcgcaagt taaaagaaga
     9661 aaaagatttg ggtttttagc aagagattga ctcttacttc caaccttcaa tataattttt
     9721 tagttttctt cctactttag ggtgtttgag tttttttata gctgaacttt ctatttgtct
     9781 cactctttct cgagtgacat taagctcttt tccaatttcc tctaaagttc tatcactttc
     9841 atcatccatt aaaccaaaac gcatacgaat taccgctttt tctctatcgt ttaattgatc
     9901 taaaacttca tcaatttgtt cttttaaatc atcctttaag atatgatcca ttggagaaag
     9961 tgaatttcta tcttcaacaa aatctccaaa tttaccatca tcttcatttc ctattggagc
    10021 ttcaagagaa attggttctt ttgtgatttt aataacttgt ttaaccttat ctacgcttaa
    10081 acctacttct ttagctataa cactgacatc aggttctttt ccatcttttt gtagatgttc
    10141 gcggataatt ttgttaattt gattgatggt ttctatcatg tggattggaa ttcttatggt
    10201 tcttgcttgg tcagctatag cccttgaaat agcttgcctg atccaccaag ttgcataagt
    10261 ggaaaattta taaccccttt tgtattcaaa cttatccaca gctttcatta aacctatatt
    10321 tccttcttga ataagatcta agaaaggtag accacgattt gtgtagcgtt tagctatgct
    10381 tacaacaaga cgcaagtttg attttgccat tcttcctttt gcttcatcag agattttttt
    10441 accgcgttta atttgctcta aaatttcttt taaacgtgat ttttcaagat caaagctttt
    10501 ttcactagct tctttagttt gaaatagttt tttaatttcc atataagtgc ttaccatggt
    10561 tgtttctaaa gctcgctctg tgatttcttc tttgctcaat tttgtaatat cttttaaaat
    10621 atctgcatgg cgttttttaa gttcatcaga aaacataggt aagcggtatt ctaaacgctt
    10681 aagttctttg tcaaattctt catcgctttt tagtgcagtt tccattgatt ttacgatttc
    10741 actaataagt tttgaagtag ggcctagatc cattaatttt tcttttaaaa tatttttttt
    10801 gaacgcaatg cttaatttat ctaaaagctc atctccactt tctttgtctt tggatgtttt
    10861 taaccaatct tttttagctt tttctagagc tttaaatttt tctataactt ttaaagttct
    10921 ttcatcttct tttttgctgt tttttttagt attttcttca tctgattcta attctgtttc
    10981 gttttcttca tcttcatcta tatcaagttc atcaagttta tcatcacttt tttcttcatc
    11041 gtcaaagctt ttaaatagtt cttttaccct tctttctctg tttattaaag gttctttata
    11101 atctaaaata aaatctatca aataaggcac agaacaaaaa gcatcaatga taatatcttc
    11161 gccaagttct atttttttgg aaatttcaat ttcttcatct ttgtttaata aagcaatttg
    11221 tcccatttct cttaaataca tacgaacagg agagtctgat ctgctccatt ctaataaatc
    11281 gttttcattg gctaaatcaa attcgttctc aaggcttgta tcttggagtt tttgtttttc
    11341 ttcttgaagt ctttttgcat cttctatgtt tttcatttgt gcaatttcgg ctgctgaaaa
    11401 aagttgtact ttgtgttttt tcattaatgc ttgcactttt ttagcggttg atgcacttgg
    11461 ttgttttgta agatatttta ccaatttttc atatgtgata taatcttttg cattttcttg
    11521 aaataattct tctaattcag cttcttgagt tttggc
//
LOCUS       DARBAC010000052        11407 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.052, whole genome shotgun sequence.
ACCESSION   DARBAC010000052 DARBAC010000000
VERSION     DARBAC010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11407
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.052"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..729
                     /gene="map"
                     /locus_tag="SB799_001043"
     CDS             <1..729
                     /gene="map"
                     /locus_tag="SB799_001043"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEG0868291.1"
                     /translation="EKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMAEDYILSLGAK
                     PSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGYYGDAARTIAI
                     GEVSPTDKALISCAKDALYHAIDIIHDGMRFKELSAALGEFIHTRGFVPLRGYCGHGI
                     GRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHYNGKWDAGSID
                     GLNAAHYEHCVAVINGRAEILSMI"
     gene            complement(1101..1601)
                     /locus_tag="SB799_001044"
     CDS             complement(1101..1601)
                     /locus_tag="SB799_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868292.1"
                     /translation="MKSDLEIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELATTITMGETMDNTGIYNSTMD
                     FKNLFK"
     gene            complement(1657..2256)
                     /locus_tag="SB799_001045"
     CDS             complement(1657..2256)
                     /locus_tag="SB799_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEG0868293.1"
                     /translation="MLKQIFYIFTFIFILCGCSLKHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNANTPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLNADYALESRINSFEQILSNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIRSTYNAFQKALNKIGNEIIFWVNSNLS"
     gene            complement(2256..3146)
                     /locus_tag="SB799_001046"
     CDS             complement(2256..3146)
                     /locus_tag="SB799_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HEG0868294.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFIQLQGGSKNSKDLVSIHGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQN
                     FNSSLKNIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            complement(3149..3871)
                     /locus_tag="SB799_001047"
     CDS             complement(3149..3871)
                     /locus_tag="SB799_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEG0868295.1"
                     /translation="MVIKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGSSGSGKSVL
                     LKQMLMLEHFDGGEYEILGYKLKNIDEEDALALRKKWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKKFME"
     gene            complement(3872..4981)
                     /locus_tag="SB799_001048"
     CDS             complement(3872..4981)
                     /locus_tag="SB799_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HEG0868296.1"
                     /translation="MNANFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKDKNIKITKEGLNSRFQTLFELCEKNYQRLSKTKKSH
                     KNFSEYFIDLGKLSLELLKILIKFTNFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIIIPRVMALVVAMPLIVAISDAISII
                     GGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVVLTSAGI"
     gene            complement(4983..6881)
                     /gene="tkt"
                     /locus_tag="SB799_001049"
     CDS             complement(4983..6881)
                     /gene="tkt"
                     /locus_tag="SB799_001049"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEG0868297.1"
                     /translation="MDIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSGKKELLERLLNPDFSKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHGMGDFIEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     IFGDVKNGAYLLKESKDAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFE
                     KQDKTYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFEHFGFSVSK
                     LINFILSK"
     gene            complement(6891..7736)
                     /locus_tag="SB799_001050"
     CDS             complement(6891..7736)
                     /locus_tag="SB799_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEG0868298.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDTHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            complement(7733..8827)
                     /locus_tag="SB799_001051"
     CDS             complement(7733..8827)
                     /locus_tag="SB799_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEG0868299.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNTKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDAYWGDIGVDFVVRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNT
                     SLVVTKIDPKSKASNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            complement(8824..9135)
                     /locus_tag="SB799_001052"
     CDS             complement(8824..9135)
                     /locus_tag="SB799_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEG0868300.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            complement(9139..10422)
                     /locus_tag="SB799_001053"
     CDS             complement(9139..10422)
                     /locus_tag="SB799_001053"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEG0868301.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALVQNRIEGLKFVAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISAIATNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGTIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILSGFAKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            complement(10406..10957)
                     /locus_tag="SB799_001054"
     CDS             complement(10406..10957)
                     /locus_tag="SB799_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEG0868302.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLIGFKSEIKT"
     gene            complement(10944..11216)
                     /locus_tag="SB799_001055"
     CDS             complement(10944..11216)
                     /locus_tag="SB799_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEG0868303.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGVVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
BASE COUNT         3667 a         1879 c         1676 g         4185 t
ORIGIN      
        1 gaaaaattaa gaatagcaaa tcaaattgta gcaaaaactt taaatttttt agagaatgaa
       61 attaaaatag gaatgagctt aaaacaaatt gataaaatgg cagaagatta tattttaagc
      121 cttggcgcca agccatcatt taagggactt tatggttttc caggtgccat ttgtacatct
      181 ttaaatcaag tttgcatcca tggaattcca gatgataaaa ttatcaaaga gggtgatatt
      241 ttaggtcttg atgtgggaag tttgattgat gggtattatg gggatgcagc aagaactatt
      301 gctataggag aagtttcacc cactgataaa gctttaatct cttgtgctaa agatgcgtta
      361 taccatgcta tagatattat tcatgatgga atgcgtttta aggaactttc agctgcttta
      421 ggcgaattta tccatacaag aggttttgtc ccgcttcgtg gatattgcgg gcatggtata
      481 ggacgaaagc ctcatggaga gcctgaaatt ttaaactatt tagaaaaagg tgcgagtgca
      541 aaaagtggcc ctaaaattaa aaatggaatg gtgttttgca tagagcctat gatatgccaa
      601 aaagatggaa caccaaagca ttataatgga aaatgggatg ctggaagtat tgatgggctt
      661 aatgcggctc attatgaaca ttgtgttgct gtgattaatg ggcgtgctga aattctttct
      721 atgatatgat attaaattat aaaaataata tttttttctt aaaatcctaa aaatttaaaa
      781 ttttttaaat aatattgtag taatattctt taataattta agttactaaa tgatattttt
      841 atagcagttt aagtgttgtt agaataaaat gtcacatcgt attaaactaa aacataaata
      901 tggtttagat aatttaataa aaattattaa attatctaaa tatttatttt agtttaaaga
      961 gatcttttaa gatctcgttt gggttaggct atttccctcc ccctttttat tcgtagccta
     1021 actctctttt aagagtttgg aaaatctctt taagctaaaa tatattatat ttgcttaaag
     1081 agaacaaacg attactattc ttatttaaat aaatttttaa aatccattgt agagttataa
     1141 attccagtat tatccatagt ttcgcccatg gtaattgtgg ttgctaactc tgatagaatg
     1201 atttttattt catctctttt atcttgtata taggccaata caccttcgta attacttgtt
     1261 tgaagaatta aaagtggatt agcaatttca aattcaaaaa gttttttacc aacataaaca
     1321 ttgaaaatat ttccaaaaag ggctgttccc atgaaagagc agttttgtat aagttgtgat
     1381 gctgtggcat caagagttct tttttgcata tcatctgaat tttcatctat tctttctaga
     1441 atgctttttt ctattttttt taaagacata tcaagcactt gaagtgctcc tataaaatca
     1501 tttgcatcat tgatttgaga gcaaatttga tttgctttaa attcattcac gccttgaatt
     1561 tcgcctaagt gttttttaaa tatttctaaa tcacttttca ttgtttacct ttcaaaaata
     1621 ttgctaaata tttaaaaagc aaaaagtgtt cctaaattag gataagttag aatttaccca
     1681 aaaaataatc tcattgccaa ttttattcaa ggctttttga aaagcattat aagtagagcg
     1741 gatatctttt ttttctattt tttctttagt attgaaaatt ttatgagcta ttatctgatt
     1801 gttttcaaga tttatgaaat ttacacttat agaaatttga gcgtagtttt cattgttgct
     1861 aagaatttgc tcaaaagaat taatcctgct ctcaagggca taatccgcat ttaaagagct
     1921 tgttgaagaa agtaaggttg taaaaatatt gctttgttca aattttgaca aaattaaaaa
     1981 agaataaaga ttgcttggca aatctcccca gaaataatgt gcatatttgt tgctaaaacc
     2041 attatctata taaacaatag ctcttgagtt taaatacaaa ggtgtatttg cattgcgaat
     2101 tttaagaatt ttaccggttt ttttaaaaaa aatatttgag tctattcctt catcttttaa
     2161 tatgatattt tcatttttat tgatggtttc gtgttttaaa gagcatccgc ataatataaa
     2221 aataaaagta aaaatataga atatttgctt tagcattatt tttctcctgg tccaagttta
     2281 ggtttagttt ctttaaaaat caaatcagca gggctgtttt gtaaattttc tattagaata
     2341 ttgctttcaa ttaaaacccg tttaaaaagt tctaaatttt gcatcaaaga tgctttaata
     2401 tcatcataag tgtttaattt ttcatcagct ttttttatga aattttttaa aatcattgtg
     2461 ctttctttta tgtttttaag actggagttg aaattttgcg cactaaggct tatattatca
     2521 gccatttttc ctatttttaa acttgcgttt gaaagattaa gacttaaatt tttagaatta
     2581 gcgtttaaat ttgcacttaa ttctgctaga ttttgcaaaa ggatttctag atttttaaga
     2641 tttttttcgc ttaaaagttc ttttgattta tcatcggccg ttttaaccaa agaaaaaata
     2701 tgttcacttt gtctgtctat ggttgctaaa aaactttctt taaaaggaat gactggaagt
     2761 tttccgtgga tagatactag atctttacta tttttacttc cgccttgaag ttggataaat
     2821 ttaagtcctg tgataccttg aagttgtaaa gtagcaaagg tgtcttcttt tataggggta
     2881 ttgtttttga ccttgatgcg tatattaacg ccgagttcat cttgattgta aatgctgatt
     2941 tcttccacgc tacctacttc cacgcccaaa agccttacgg gtgcttttat accaagtcct
     3001 gcaacggatt cttgtgtgtg aatttcataa tacttaaaac tttcttcttt ggagtatccc
     3061 ccaagccaaa gtatgaaacc aagacttgca aaaaatactc caaaaacaaa aagtcctaca
     3121 aaaaaataat ttgctctatt ttccactttt actccataaa ttttttaaaa agtcgttcat
     3181 tttgcaagcg caattcttcg taagtaccgc aaaatccaac ttttttattt tctaaaatga
     3241 taaagcgatc gagtaaattt ttcatacttt ctttatcatg tgtaaccaaa atgatattta
     3301 aatcaaaact tttttttaac tctaaaacca aatcgtcaaa ttcgcgacta ctatgagggt
     3361 caagtcctga agtaggttca tctaaaaaaa gcaatttact atcaagtgct aaagctctag
     3421 caattgccac tcttttttgc ataccgccac taagttcgct tggaaattgt tttaaaacac
     3481 tttcgtttaa gcctaccatt tttagcttca ttaaaaccag ttcttgtatg ctattttcat
     3541 ctaaatgagt gtattctttt aaaggaatag cgatattttc ataaacatta aaaaagctaa
     3601 aaagtgcagc aaactgaaaa accacacccc attttttacg caaagcaagt gcatcttctt
     3661 cgtcgatatt tttaagttta tagcctaaaa tttcatattc tccaccatca aaatgttcaa
     3721 gcataagcat ttgttttaaa aggacggatt ttccacttcc actacttcct aaaataccaa
     3781 aaatttcatt ttttttgatt tcaaaactta cgccatcatg gacaattttt tctccaaatt
     3841 ttgtaatgat attttgcgct ttaataacca tttaaattcc tgcagaagtt aaaacaacag
     3901 agaataaagc atcaaaagct atcacccaaa aaatagcatt tacaacgctt tttgttgtat
     3961 aaattcctat gctttgtgta gtgtttttta cctcaaaacc acgaaaacaa gcaataagtc
     4021 ctattaaaaa tccaaaaata ggtgcctttg caagtcctat aaagatatgt tttatatcta
     4081 cagcttctct aaagcgtctt aaaaattcgg caaaagaaat atcaagattt aattttgcaa
     4141 ccatcattcc acctataata ctgatcgcat cgctaatggc aacgattaaa ggcatagcca
     4201 ctaccaaagc cataacacgc ggaataataa taaattcaaa agaacgaaaa cccatagtat
     4261 tcatagctgc aatttcatca gtgattttca tcactccaat ttgtgcggta taagaacttg
     4321 cacttcttcc tgcgatcact atggcagcga ttaaaggtgc aagttctcta gtggctgaaa
     4381 ttcccatcaa atccactatg aaaatattgg ctccaaattg tgcgagttga taagcagcct
     4441 gataggctaa aaccactcct actaaaagag cggttaaaat aactataggc aaagctttaa
     4501 aagcagaatt ttctatatga tataaaaaag caataaagcg aaaattttta ggatttttaa
     4561 ggcataaaaa aagacttgtg aaaaaagctc ctgtgaaatt ggtgaatttt attaaaattt
     4621 ttaaaagttc taaacttaat tttccaagat cgataaaata ttcactgaaa tttttatgtg
     4681 atttttttgt tttacttagt ctttggtagt ttttttcaca aagttcaaaa agggtttgaa
     4741 agcgtgaatt taagccttct ttggtgattt taatattttt atctttaagg tcattttcca
     4801 aagcaaggaa aaatcttact ccagcggtat cgattgcttt tagatcttta aaatcaaaaa
     4861 tcacttcctt gctttgaatc aaagctaaaa aatcttttat ttttaactta taaatacttg
     4921 ttttatccca aattccaaag ataaaaagag tgttattttg aaatttgaaa tttgcattca
     4981 ttttatttgc taaggataaa atttataagc tttgaaacac taaatccaaa gtgttcaaac
     5041 acatctttgt ctttaccact ttctccaaaa ctttctatgc catacacttt gtggcaaaat
     5101 ttataaagtt cattagaatg cgctgcttca acgcctataa cttcaccttt taacaatctt
     5161 tcttgataag ttttatcttg tttttcaaaa agttcaaaac aaggcataga aacaacatta
     5221 caagcaaaac cttgtttttc aagttcgttt gcactttcta gacaaagcca aacttcactt
     5281 ccacttgcta gaagtgtaaa tttagcgtct ttgctttctt tgagtaaata cgctccgttt
     5341 tttacatctc caaaaatagg ttcatttaga gctttgagtt tttggcgtga aagcacaaaa
     5401 gcacttggaa tatcagcatt tagggctatt tgccaagctt tgacattttc taccccatca
     5461 gcaggcctaa aggttaaaaa atttggcata gctctaaaag tgctaagttg ttctataggc
     5521 tggtgtgttg ggccatcttc gcccacgcct atgctatcat gcgtgaaaat aaaaaaatgt
     5581 ttgattttca ttagggctgc tattcttgcg gcaggtttta agtactcact aaagatgaaa
     5641 aaagttgccg aaaatggtaa gaaaattcca tatcttgcaa aagcattgtt aatcgctgcc
     5701 atagcgtgtt ctctgatgcc aaaatggata tttttacctt ctataaagtc tcccataccg
     5761 tgaagttctg ttttatttga agggcctaaa tccgcacttc cacctaaaaa tccttctaaa
     5821 tttttagcta aaacatttaa aatttcacca ttgctatctc ttgtagcaag atcttttcct
     5881 ttaaaatcag gataagctat cttgctaaaa tcagggttta atagcctttc taaaagttct
     5941 tttttaccac ttttttcaag tttatctttc cattttgctt cttctaaatc cccaagttct
     6001 acagcacttt caaagcggat tttgcttgct tgtgggatat gaaaactgat atttggatca
     6061 aaacctgctt gttctttggc ttttttaatc acttcttcgc ccaaaggtgc gccatggctt
     6121 ttatgactgc cttcaagctc tcctgcaccc tttgctatag ttgtttttgc gatgataaga
     6181 caaggttttg tggatttttt agcttgttct aaggctttat taatttcttc ataatcgtgt
     6241 ccatttatac ttaaaacttc aaatccttgt gcttcaaaac gcatttttac attttcgtta
     6301 aaggctaaac ctacatcgcc ttctatggag atattgttgc tatcataaat aagtatgaaa
     6361 ttatcaagtt tgtgaagtcc tgctaaagaa caagcttcat aagaaatgcc ttcttgtaaa
     6421 tccccatctc cgcaaagaca ataaatttta tgatcgatta aatcactacc tagcaaattt
     6481 tgcgcttttt ttgctgccat agcaaagcct acagcgtttg caacgccttg tcctaaaggg
     6541 cctgtagcga tttctactcc aagagttgaa atttcagggt gtcctggggt tttagaatga
     6601 agttggcgga aatttttaag atcttctaag cttaaatcat agccacttaa atgtaaaaaa
     6661 ctataaagca aagcacttgc atgtccgcct gaaaatacaa gtctatcacg gtttagccaa
     6721 gtgggatttt taggattgtg ttttaaatga taacttaaaa cacttaaaat atctgctaaa
     6781 cccaaaggtg cacctgggtg tcctgagttt gctttttgca ccatatcggc acttaaaaat
     6841 cttagagtat ttgcctgttc ttgtaaaatt tgaatgtcca ttttttgcct ttataagtat
     6901 tgaattatta aattttgtat catttgcgcg agtttttcat taagtttttc taagtcttgt
     6961 tcacattcac taagaagatt ttcttttgtt tttatggctt gttcaagtcc aagtaaattg
     7021 acaaaagaat ttttatgagt atcgttgtta gtaggctttc cgctttgttc ttgacttgta
     7081 gttacatcga taatatcatc attgatttga aaaatcagtc ctagttttaa accaagtttg
     7141 taaatttgat tgctttcttc gttgttaagt tcgcaaattt cacaacccat ttttaaagct
     7201 gcagcgatta atcttgcggt tttgtgtgta tgtaaaaact caagttcatt taaactcagt
     7261 cttttgtctt caaagaaaca atcaatagct tgtcctatga ccattccatt aagtcctgca
     7321 ttaaaggcaa gggttttgat gagtttgatt ttgatttcat cttttaaatg agcatgactt
     7381 agaactaaaa aagcttcagt atttaaagca tcacccacta agatggctgt agtttcatcg
     7441 tagcttttgt gtaaggttgg aattcctcgt ctaaaatccg cattatccat agcgggtaaa
     7501 tcatcatgta tgagtgaata agtatggata aattccaaag ctaaagccac atctaaagct
     7561 tgatttaaaa gttcaggttt attgctttgt actacgctta aaagcaattg tgcacgaaaa
     7621 tgctttcctc ctgcttttag cataagggct aaagcttcat taaaaaaagg atgaaaactt
     7681 tcaactttag gtagattttt ttctaagtga tggataaaaa gttcttttaa attcacttag
     7741 taagccttat gaaaaattga aatttaccgt cgccacctga gttggcattt ccgcctagtt
     7801 cattgttgaa atttgataaa ggtaatttag tacttttgcg ttcaatcaag atgctaaagt
     7861 cattaccagc gcttaaaata ttttgtaatt ctttaaaatt atttaaaata atattattaa
     7921 cgcgtaaaat tttatctcct accataaatc ctgcatttga tgcttttgat tttggatcta
     7981 ttttagttac aacaagacta gtattaaccg ttaaaccaag attgcttgtg aaatttgtaa
     8041 tttttggttt tggtttagaa tcaggaagat taaatttgct caaatctttt gcaaaaactt
     8101 cagtagaaat atttaaatcc atattatcac gcaacacttg aaaataaaga gtgcttccgc
     8161 gatctgcaaa aagaattttt tcattgagtt ttcttaaatc attggcgggc aagccatcaa
     8221 cacttataac ttgatcgttg attaaaaatt gtggattttt tcttacattg ttaacataaa
     8281 ttttattttc tcgaacaaca aaatcaacgc caatatcccc ccaataagca tcgttatatt
     8341 tcataaaatg ttttaaatag cgattgccta taaaagagct attatttaaa gcaatcccca
     8401 tcatttcaca gcacggagtc cctaaaagtc ctattttaga attaaaatca agttgatctt
     8461 tttcgtcaat attttgagct aaatacttaa tatgccctat ataaggttta ttaggatccc
     8521 aaattccaac ccaatcatta cgagtaagtt tttcttcatc acccatagga gtagggatta
     8581 ggctaaagtc agttcttaca agatataaat ttaaaaatgg atcatatttt acatatttgt
     8641 taagcttagt attaggctgt tttaacacag caagtaaatt ttcactgagt gcaaaagctg
     8701 gcattccttc atagttgagc atgcttgcct tatttctttc ataacctgct aaaaaatctt
     8761 caaatttagg tctttctata ccaaaagaca aagtaaaaag catgcaaata attaaaattt
     8821 ttttcataat ttcatacctc caaaaccacc taaaacatca tttgccatac tggaacgatt
     8881 ttgcgcaacc atagccaaaa catcattaat tgcagaaata agtaaaattt gcaaggactc
     8941 tttatcttca agtaaagaat catcaatgct aacatcgata atttcaccct ttccattagc
     9001 acttacttta acaagtcctg ctccactttt ggcgctaaat tcacgatttg caagttctag
     9061 ttctatattt tttgcttttt cttgaacttg atttaaaagt tcgcccattt tagaaaaatc
     9121 catattttca aacattgatt atccttgatt ttttaaaatt tcattaacaa ctactttatc
     9181 actaaaagga tattttatcc ctttaatttc ttgagtagtt tcatcacctt tgcctaaaat
     9241 aacgactaaa tcgtcatttt cttttagttc taaagctttt tttatagctt cttttctatc
     9301 ttctatcatt aaaacttttt cttttttagc aaagcctgat aaaatttctt ccatgatggt
     9361 ttttggttct tcgctacgtg gattatcact tgtaatgata gcaatttttg caaaatgttc
     9421 gacgattgtt cccattaaag ggcgtttggt tttatctcta tctccacctg ctccaaaaac
     9481 aacgatgagt tttttatttt taagagtgtc aagtactttt tcaatgccat caggcgtatg
     9541 agcaaaatct acgatcacac cttttgctac ttgttctact ctaccacaaa ccccgccaaa
     9601 tccactgata gctttttcta aatcttttaa atcaggcttt acgagttcat tcacacaagc
     9661 actagcaact agaagattgt aaagattaaa aagtcctagc aagggcgagt ctatgtgaaa
     9721 agtttgattt ttatttgttg caatagcact aatgccttct tctaaagaat aagctttgat
     9781 ttgatataaa gcaggatttt ctataccata agtaaaagca ttacgcacat taaatttaat
     9841 agccaaagca tctttgttga taaattttaa actctcatct gtaaaaaaaa gctcttttgc
     9901 ttctttgtaa ttttcaaaag taccgtgaaa atctaaatga tcttgagtga tattggtaaa
     9961 aattttagca acaaatttta agccttcgat acggttttga acgagtgcgt gtgagcttac
    10021 ttccatgatg aaaaaatcac attttttttg agtggctatt tgtaggtact ctaaggtttt
    10081 aagaataggg gaggtggtta aggatttttc atcaatttgt tcatcgttga taaaagctcc
    10141 tcttgttccg caaagcccgc atttataacc taaatccaat aagatagaat aaatcgctgc
    10201 tgcggttgtg gttttgccat tggttcctgt gattcctatg atttgaatct tttcatcgat
    10261 ttttaaaagt tttttacact catttacatc aatgattttt gcaccttttt ctaaggcttg
    10321 agcgtgaaat ttagcatttt gtgtggtttg taaaaaaaag cattcttttt cacactctaa
    10381 ggtattatct gtaatgaatg aattttcaag ttttaatttc acttttaaat cctatgagtt
    10441 tttcttggag tttgataaat ctatcatttg cccaaaaatg aggcataaca ttttctatat
    10501 aatttaaagt catatcttta tagccattat caagtaattt ttccaaaaaa tctaaaaaat
    10561 catcacgatt atcaataact aatttagtgc tattaatgat attttcaaaa cttttttgaa
    10621 agccaagttc ttcttcgctt tttaaaaaat cttgataatt taacgcatgc ccatcttcaa
    10681 attcattttc ctgtttgttt tcttgttttt taaattcaat tgtacttaaa atttcttcta
    10741 agtctttatc aatgctagag attttgtaat gttctatata aaaatcaaaa agtaaagaag
    10801 cttctttagg agattttaaa gcaagatcac aaaggcagat aaaatttagc aagcgtttat
    10861 ttttgcgttt ttcataagcc atagaaaaat acatttttgc agttttaaaa tctttcttgt
    10921 aaaaatgttc aattccaagt tttttataat tttgcaaatt cgtctgctcc gccgtttaaa
    10981 ttgattatag tgatttctgg atgaatatcg atcttaagtt gcctttcaag gccatatttt
    11041 agcgttgttc cactcgatgc acagccttta caagctccta ttaaatggac ataaacaacc
    11101 ccatttttaa ttcctaaaaa ttcaagccct ccgccatcac gttcaagcat aggcaagctc
    11161 ttttctaaac ttgctttaac aggatttata agctcttcat cgctaaaagg catcataatt
    11221 tatccttaaa aatttttata tactttagcg tgattgtgtt taaaaaaagg taaattaagg
    11281 cttgaaattt aaataaatta aaaaggttcg tcattatctt gtgcgctaaa tcctaaatca
    11341 taagctgtaa agtttttgtt gctaaaaatt ccatttaagt ttctaaatga ttgttgcaga
    11401 atttctt
//
LOCUS       DARBAC010000053        11308 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.053, whole genome shotgun sequence.
ACCESSION   DARBAC010000053 DARBAC010000000
VERSION     DARBAC010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11308
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.053"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(127..243)
                     /gene="rrf"
                     /locus_tag="SB799_001056"
     rRNA            complement(127..243)
                     /gene="rrf"
                     /locus_tag="SB799_001056"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(518..3467)
                     /locus_tag="SB799_001057"
     rRNA            complement(518..3467)
                     /locus_tag="SB799_001057"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(4003..4079)
                     /locus_tag="SB799_001058"
     tRNA            complement(4003..4079)
                     /locus_tag="SB799_001058"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4043..4045),aa:Ile,seq:gat)
     gene            complement(4088..4163)
                     /locus_tag="SB799_001059"
     tRNA            complement(4088..4163)
                     /locus_tag="SB799_001059"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4128..4130),aa:Ala,seq:tgc)
     gene            complement(4266..5778)
                     /locus_tag="SB799_001060"
     rRNA            complement(4266..5778)
                     /locus_tag="SB799_001060"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(6259..6996)
                     /locus_tag="SB799_001061"
     CDS             complement(6259..6996)
                     /locus_tag="SB799_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868304.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELAIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNITKRFGIEKVEFKG
                     SCSGFTRLVFDEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVIDTLSG
                     YAYIPDFKTLKSQFVNIKNKNYECSKI"
     gene            complement(6989..8215)
                     /locus_tag="SB799_001062"
     CDS             complement(6989..8215)
                     /locus_tag="SB799_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868305.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            8343..8927
                     /locus_tag="SB799_001063"
     CDS             8343..8927
                     /locus_tag="SB799_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEG0868306.1"
                     /translation="MQTIDQIFQTQIDIKKSIFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNISIAIDLKNLNRFEYFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFYKNFAPFEIEKL"
     gene            complement(8971..9354)
                     /locus_tag="SB799_001064"
     CDS             complement(8971..9354)
                     /locus_tag="SB799_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868307.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQVEDYSSSGKSDFMDILNK
                     ADEKSSGDALNSSNSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLVQQGANEQSKNNTLLNDLLNAI"
     gene            complement(9430..9765)
                     /locus_tag="SB799_001065"
     CDS             complement(9430..9765)
                     /locus_tag="SB799_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868308.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            complement(9755..11308)
                     /locus_tag="SB799_001066"
     CDS             complement(9755..11308)
                     /locus_tag="SB799_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEG0868309.1"
                     /translation="MRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLKILSGEIE
                     SSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKLYMSEEFTD
                     EINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADKFKVLLAQV
                     LFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKICTRILDVDF
                     KQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSR
                     AKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEFKGIGKAYDKQLFSNLELKIEK
                     NDKIALIGANGVGKSTLAKIIAHAISPDTGSMHLGATIELGYFPQDTSNLICENLKLY
                     EWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLL
                     DEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTY
                     QEFLGENDG"
BASE COUNT         3545 a         2377 c         1720 g         3666 t
ORIGIN      
        1 tattctctct aaaaacccta accagcagca aactcttttt taaacactat ttcaaacacc
       61 atctaaaaca acaataaaaa taaacatagg atttatatat aaagtaagta atgaagacat
      121 ttaacaagtc cgcaatgagc tactttcccc ctgccagtaa ggcgtagtat catcacccac
      181 gatgtgctta gcttcttggt tcgggatgga gcaaggcgtt tccacatctg tataatcacg
      241 gacattgtta tttaaatatt ctttgaaaga ttgaatttaa aaaataaagc ttaatctttt
      301 atttctttac ttttttcttt attctctttc ttcttttgtt tttatttatt tttttcttat
      361 cttttatctt tgataagttt ttatatagaa tacttaaaaa acaatgttaa gagcaagttc
      421 taatacaaac tctacttgaa agatttctac taaactctaa atattattta tattcaaagt
      481 cttcttaaaa accttaacaa ggaagtgatg ctttattaaa gataagccaa acgctctatt
      541 agtactggtc agctaaagga ctttcatcca ttacacaccc agcctatcaa actagtagtc
      601 ttctagagag cttagagaag attcatctta gagttggctt cacgcttaga tgctttcagc
      661 gtttatcctt tccaaactta gctacgctgc gatgctcttg gcagaacaac agctacacca
      721 gtggtttgtt caacccggtc ctctcgtact agggtcaaat ctcttcaatc ttcttacgcc
      781 cacggcagat agggaccgaa ctgtctcacg acgttctgaa cccagctcgc gtaccgcttt
      841 aaatggcgaa cagccatacc cttgggacct gctccagccc caggatgcga tgagccgaca
      901 tcgaggtgcc aaacctcccc gtcgatgtga gctcttgggg gagatcagcc tgttatcccc
      961 ggggtacctt ttatcctttg agcgatggcc cttccacaca gaaccaccgg atcactaaga
     1021 ccgactttcg tctctgcttg acttgtatgt cttgcagtta agctggctta tacctttata
     1081 ctctacgaac gatttccaac cgttctgagc caacctttgt aagcctccgt tattatttgg
     1141 gaggcgaccg ccccagtcaa actacccacc agacattgtc ccacttgagg ataactcaag
     1201 ctggttagct acccaaataa gaaagagtgg tatctcaaca atggctcata tacaactggc
     1261 gtcatatact caaagcctcc cacctatcct gcacattctt atccaagtag cagtgtcaag
     1321 ctgtagtaaa ggtccacggg gtctttccgt cttgccgcgg gtaggaggaa ttttcacctc
     1381 cactacaatt tcactggatc cctctttgag acagctccca tctcgttacg ccattcatgc
     1441 aggtcggtat ttaaccgaca aggaatttcg ctaccttagg accgttatag ttacggccgc
     1501 cgtttactcg ggcttcgatc aagagcttcg ctaatgctaa ccccatcaat taaccttcga
     1561 gcaccgggca ggcgtcacac cctatacatc ctcttacgag ttagcagagt gctgtgtttt
     1621 tggtaaacag tcgggaggga ctctttgttg taagtttctt cgctttcgga gtaaatccta
     1681 gtacgaagct aaccacacct tataccgaag atacggtgct attttgcaga gttccttaaa
     1741 gagagttctt ccacgcgcct tagaatactc atcccaccca cctgtgtcgg tttacggtac
     1801 gggcaacatt agctaaactt agaaactttt cttggctcga cggcatcagg ggttcttcta
     1861 tccatccgaa gacttcaaaa agcctttcag ttctcggagt attgttatac ggatttgcct
     1921 gtataacctc ctacgacctt agactagcac ttccatccgc tagccccctt agccctaagc
     1981 gtccttccat cgcacactaa tgttggtatt ggaatattaa ccaatttgcc atcgtctacc
     2041 cctttcggac tcgacttagg acccgactaa ccctacgatg acgagcatcg cgtaggaaac
     2101 cttgggttta cggcgttaat gattctcaca ttaattatcg ctactcatgc ctgcatgctc
     2161 acttctattc gctccagcac tccttaccgg tataccttcg acgcaaatag aacgctctcc
     2221 taccacttgc acacaactta aactacttat tctaaactta aataatctaa gttgtgtgca
     2281 agtctacagc ttcggtactt actttagccc cgttatattt tccgcgcaaa atcactagac
     2341 cagtgagcta ttacgctttc tttaaaggat ggctgcttct aagccaacct cctggttgtt
     2401 taagtaactt cacatcgttt tccacttaag taagatttag ggaccttagc tggtagtctg
     2461 ggttgtttcc ctcttgacga cggattttat cactcgccgc ctgactgctg tgattacata
     2521 taaggtattc ggagtttgat agggtttggt acattggtgt atgccctagc ccattcagtg
     2581 ctctaccccc ttatattacg acacaacgct atacctaaat atatttcgga gagaaccagc
     2641 tatcacgaag tttgattggc ctttcacccc tatccacaag tcatcccggg gcttttcaac
     2701 gcctatgggt tcagtcctcc actagttctt acactagctt caacttgctc atggatagat
     2761 cacttcgttt cgggtctgca gcatctgact aagcgcccta ttcagactcg ctttcgctac
     2821 ggcttcgcgt ttgcttaacc ttgccagaca ccacaactcg caggctcatt atgcaaaagg
     2881 cagtccatca cactgtattg ctacatagtg ctctgaatga ttgtaagcaa atggtttcag
     2941 gttctatttc actctgatca cctcagttct tttcaccttt ccctcacggt acttgtgcac
     3001 tatcgatctg gtattagtat ttagggttgg atcgtggtcg acccggattc agacaggatt
     3061 cctcgtgtcc cgccctactc aggatactgc tagctaagct ttgtttttcg catacgggac
     3121 tatcaccctc tatggctata ctttccagaa tgttctgcta aactcagctc ttgcacattg
     3181 cagtcctaca acccccagtg caagcactgg gtttgccctc ttgcgctttc gctcgccgct
     3241 actgacgcaa tctctattga tttcttttcc tgagggtact aagatgtttc aattcccctc
     3301 gttcgctcct atataggtaa tgtatatctc tatacattgg gttgccccat tcggaaatct
     3361 acggatcaaa gcttcttgac agctccccgt agcttatcgc agtctagtac gtccttcatc
     3421 gcctttacca gtcaaggcat ccaccattcg ctcttagtag cttacctttt ttaccttttt
     3481 tattgattct aaaacgcatc acttccttgt taaagttttt atgataagac ttctttatct
     3541 taagacggaa agcattcaaa cacttaatat aaaactaaat gatttagtct caactaagct
     3601 gtgagtttga aacttgtctt taatttataa atcttaaatc taatattctc tttattatag
     3661 aaataaagat aattaaaaga tataagttaa actaaagaaa agataaatag gttttatcct
     3721 ttaacaagtc ctgtaaaatt gtttttatta aaacttgctt gtgactctta acaatgataa
     3781 ttaaaaagaa cattaggttt aaaacctaaa ggaagtatat atattaatat aatctcatta
     3841 taaatataaa tacataatgt atatgctatt tatatctatt aaagtatatt cttttatagc
     3901 taaagataaa aataaatcta agtatagagt ttatatttta tatttaatct actttatata
     3961 cttgctttag attttaaagc ttttttattc aaatcttttt tatggtgggc ctaacaagac
     4021 ttgaacttgt gacctcaccc ttatcagggg tgcactctaa ccagctgagc tataggccct
     4081 taataaatgg tggagaatag cgggatcgaa ccgctgacct cctgcgtgca aagcaggcgc
     4141 tctcccagct gagctaattc cccataaaca attagcttta tcatcaatct ttgaaatcta
     4201 aacaagaatc aattgagttt atatattgaa gtaatagttg tgagacttat tactttgtac
     4261 tctagaaagg aggtgatcca accgcaggtt ctcctacggt taccttgtta cgacttcacc
     4321 ccagtcgctg attccactgt ggacggtaac tagtttagta ttccggcttc gagtgaaatc
     4381 aactcccatg gtgtgacggg cggtgagtac aagacccggg aacgtattca ccgtagcatg
     4441 gctgatctac gattactagc gattccggct tcatgctctc gagttgcaga gaacaatccg
     4501 aactgggaca tattttatag atttgctcca cctcgcggta ttgcgtctca ttgtatatgc
     4561 cattgtagca cgtgtgtcgc cctgggcata agggccatga tgacttgacg tcgtccacac
     4621 cttcctcctc cttacgaagg cagtctattt agagtgctcg gccgaaccgt tagcaactaa
     4681 atacgtgggt tgcgctcgtt gcgggactta acccaacatc tcacgacacg agctgacgac
     4741 agccgtgcag cacctgtctc taagttctag caagctagca ccctcatatc tctataaggt
     4801 tcttaggata tcaagcccag gtaaggttct tcgcgtatct tcgaattaaa ccacatgctc
     4861 caccgcttgt gcgggtcccc gtctattcct ttgagtttta atcttgcgac cgtactcccc
     4921 aggcggtaca cttaatgcgt tagctgcatt actgagatga ctagcatccc aacaactagt
     4981 gtacatcgtt tagggcgtgg actaccaggg tatctaatcc tgtttgctcc ccacgctttc
     5041 gcgccttagc gtcagttgag ttccagcaga tcgccttcgc aatgggtatt cttggtgata
     5101 tctacggatt ttacccctac accaccaatt ccatctgcct ctccctcact ctagactatc
     5161 agtttcccaa gcagtttaat ggttaagcca ttagatttca caagagactt gataatccgc
     5221 ctacgcgccc tttacgccca gtgattccga gtaacgcttg caccctccgt attaccgcgg
     5281 ctgctggcac ggagttagcc ggtgcttatt ccttaggtac cgtcagaatt cttccctaag
     5341 aaaaggagtt tacgctccga aaagtgtcat cctccacgcg gcgttgctgc gtcagggttt
     5401 cccccattgc gcaatattcc ctactgctgc ctcccgtagg agtctggacc gtgtctcagt
     5461 tccagtgtga ctgatcatcc tctcagacca gttaagcgtc atagccttgg taagccatta
     5521 ccttaccaac tagctgatac tatatagtct catcctacac cgaaaaactt tccctactca
     5581 acttgtgtta agcaggagta tagagtatta gcagtcgttt ccaactgttg tcctcttgtg
     5641 tagggcagat taactatacc ttactcaccc gtgcgccact aatccacttc tagcaagcta
     5701 gaagcttcat cgttcgactt gcatgtatta ggcacgccgc cagcgttcac tctgagccag
     5761 gatcaaactc tccataaaaa attatagata gtttaatctt tttcttcaaa gaaaaagtta
     5821 tgaaagatta aaagaaaagt ttttaatctt tttcattatt agattgaata gattttacat
     5881 aattgcttat gcctaaatct ttatctggct caatcgatca cttatttaga tttcaaagat
     5941 tgactaataa gatttgaata acaatactaa attaaaagaa caaaacaaaa aatcattttt
     6001 aaaagaaaag tttttaaatt aaaaaacaag atttataaaa aagcttttag tttataagat
     6061 aaaaaccaaa agagttaatt tataaaatct actaagctag tgaaacttta taatttaaaa
     6121 gattttaagt cctttttttc aaaaaaggaa atgaaagtat aaccaattaa acttaaaagg
     6181 ggattaaata aaggattaaa tagtataaat atttgtgtaa gtatttatat aagtatttgg
     6241 tgggttgaaa aatgggggtt atattttaga gcactcgtaa tttttatttt ttatattaac
     6301 aaattgactt ttaagtgttt taaaatctgg aatataagca taaccgctaa gcgtatctat
     6361 aacgatacaa agagcatgct tttttgataa caaacgtata atgcaatctg aattattctt
     6421 tgctaaagtt ttttcatatg cataattggc attttttaat ggagaataca ctctgcccat
     6481 ttcatcaaat accaatctag taaatcccga acaagatcct ttgaattcaa ccttttctat
     6541 tccgaatctt ttcgtaatat taaatctttg tgtagttttt tcatcatctt tactaataac
     6601 tccactttga cctgaattca ttaatttgtt atgattgatt acatcaacag caatttctct
     6661 atctatattg atttcagttt tgcctaaatt agcatttcca tcgccatttt tatccaagaa
     6721 aatagtatat gtttgatcat aacctgtagc agctgatttt ataaaataaa tctgccactt
     6781 acttttaaac cactctcttt ttgcgatagc caactcatca actcttatgc cttcttgcat
     6841 catggctaaa ctttgggtat attggatatc attaagaatt tgtattgcac cttctaatag
     6901 attgtctttt tttaagtaaa gactgcctaa attaaaaact atacctaaaa tgagaattat
     6961 aaacacaaat tccaacaaac tgaaagcttt aatcatagtt taaaatctga tatacttttt
     7021 catattttcc aagttttact ttaacaattt ttttgtccat atcatgctta tcggcttgtt
     7081 ttaaagcttt taaataaaac ttattgctat tttttattcc ataaaatcgc aatctttttt
     7141 gcaaacttgg ggctgttgca agctctaaaa catcttgttt ttttaattct agtgccaatt
     7201 ctttagcaaa atgataatta ttggcaaaat gacgatttgg attgtttata aaataataca
     7261 ataattgatt agcgacgatt aaaaagtaac aaaatatcaa aaaaattata gaacattcta
     7321 taaagatttt ataccttaat cgaaaaactg gcaatctcac cctataactt tgcattaaag
     7381 tttttataag caaaggagtg caaataacac aaaaaggcaa aaaatcatct aaaaaaagtt
     7441 tttgtcttaa agaaagcaac aaacaaaata caaatgttac gctcattaaa aaccataata
     7501 aatttttata tttttgaaaa gtcaaacgat aaatagtata aaaaaagtac acaaaaacca
     7561 aaggagaaaa acatgcagca aaaattccta aggtatctaa aaaataacct cttggacgac
     7621 cacctgtatc aaaaccataa aaactgatac tcgctccaaa caaaacaaga gataaggtaa
     7681 ataaaatagc atttctttta taaatcccaa aaaagaaaaa agttaaaaat aaaatattaa
     7741 aagatttatc aacaaataat actataatca ataatatata aaaaagccat tttttttcat
     7801 attcgtaagc acataatata gcaagggtta aaaaaatcac caaagatgcg gcattaacca
     7861 gtaaagcact tgcaacagta cctggtaata aaacaaataa caataaagaa aaaaaagcat
     7921 caattttagt tttagtatat tttaaagcta gcaaatacaa aagcaaacaa cttaaaaaat
     7981 gaaaaaataa aaaaggaagc cttaaaccaa aatcattttg cccaaaaata aaagttccaa
     8041 aatgagatat ataataaagc aaactatggg aaaaaataag tgatttaccc tgctcaccaa
     8101 aataaatatc agcttcatca gcactaatac tcagtgttga aattccataa agcaaagcca
     8161 acaaatcaag actaagtaaa atgatgataa gtttataatt tttgattttt tccataatga
     8221 aaattttaca aaattaaact taaaatatca atgcaaatca tataaatatc aaatatctta
     8281 aaaattaaca tcaaattgat tttagttttt ataagtataa ttttaaacaa aaaaaggcaa
     8341 aaatgcaaac tattgatcaa atttttcaaa cacaaatcga tattaaaaaa tctattttct
     8401 tatcttttct ttgccctttt aaagatttta aatttttaat agaaacgcta aaaaaagagc
     8461 atccaaaagc tgttcatttt gtctatgctt atcgtgtttt aaatgatttt aatcaaattg
     8521 tagaagataa aagcgatgat ggagagccta aaggaacttc tggaatgcca actttaaatg
     8581 ttctaagggg ctatgatctt atcaatgcgg ctttaatcac tgtaagatat tttggcggta
     8641 taaaacttgg tacaggggga cttgtaagag cttatagcga tgcagcaaat gccgtgatta
     8701 ataattcttc tttactttca ttcgaattga aaaaaaatat atccattgct attgatttaa
     8761 aaaatttaaa tcgttttgaa tattttttaa aaacttattc ttttaatttc acaaaagatt
     8821 ttaaggattg caaagctata ttacatatca aattaaatga aaaagaggag caagaatttg
     8881 aaatttttta taaaaatttt gcaccttttg aaatagagaa attataaatt cttgcaagta
     8941 aatacaaaag ctccaaaatg gagcttttga ttaaattgcg ttcaataaat catttaacaa
     9001 agtattattc ttactttgtt catttgcacc ttgttgcaca agatcattgt gaacgctagc
     9061 actttgagct ctcatagaca actcaccttc attttgtcta aaacgataag cgtaaacatt
     9121 tgacatttga gcataattac ttaaatttga atttgagttt tgcgcattgc tttgaaaact
     9181 attgctagaa tttaaagcat ctccgcttga cttctcatcc gccttattta atatatccat
     9241 aaaatcagat tttccagatg aagaataatc ttcaacctgt ttatccacct gtttatactg
     9301 accactaata gcatcgtatt catacgagct gatcgttcta taatttacct gcatagtttt
     9361 ctcctttcaa aatatgcaaa aactatacaa gcaaaaagtg ttcctttttt atgcaaaaat
     9421 taatgttttt caatcatgat gagtaggcaa atgctccaca tcaagctcat tattagctat
     9481 aaattcttcc ttggcttttt tacagttttc atcacgcatt ttgcggtatt cattgcgaat
     9541 cgtgatttct ttatcgctta aaggtctatc ttctaaaaaa ctaatatgaa aataagtatc
     9601 atcgctcttt gaataagttt tataaaaatc tatataatca aaataatcct tgccattatc
     9661 aaactctacg acctcttcta tataaatcgt aggtccaaaa cccttgtgat tttgcgtata
     9721 gtgcccaaaa cctgcgctgt attgaattct aaatttagcc atcattttct cctaaaaatt
     9781 cttgataagt tccacgaaaa tccgtaagct taccattttc taaatgccaa attctattag
     9841 caaaagcaga aactaactcc ctatcgtggc tgatacaaag cactacacct ttgaaattat
     9901 acaaagcttc acccaatgca ataatacttt caagatctaa atggttatca ggttcgtcta
     9961 aaagcaagaa attcggacgc tctagcatta aacgagaaag cattaaacga tgtttttcac
    10021 ccccacttaa acttgctgcc attttttctt gatcgctgcc actaaaaagc attctaccta
    10081 aacacttgcg gatttcatct agatctttaa atttttcact cataagccat tcataaagtt
    10141 tcaaattttc acaaattaaa ttacttgtat cttgaggaaa atatccaagc tctatagttg
    10201 ccccaaggtg catagatcca gtatctggac ttatagcatg agcgatgatt tttgccaaag
    10261 tacttttacc cacaccattt gccccaatca aagcgatttt atcatttttt tctattttta
    10321 actccaagtt tgaaaatagt tgtttatcat aagccttgcc tataccttta aattctaaaa
    10381 cttcattacc tatttcacga ttggttctaa acactatact aggatctcta cgacttgaaa
    10441 ttttaatctc ttcaagctct agtttttcaa gtgccttagc acggctcgta gcttgttttg
    10501 ccttagaagc attcgcacta aaacggcgaa tgaaattttc taattcttct ctttctttta
    10561 aggttttatc acgtttaagc tcagcttgtt ttgccaaaag cgttgaagcc atataccaat
    10621 catcgtaatt tcccgcaaaa tcacgaattt gtttaaaatc cacatccaaa atccttgtgc
    10681 aaattttatt taaaaaatgt ctatcatgag agataacaac caaagttcct tcatgtctta
    10741 aaagctcatt ttcaagccaa gaaatcgcct ctaaatcaag gttatttgta ggctcatcta
    10801 aaaaaagcac atccgcaccc aaaaataaaa cttgagctag taagacttta aatttatccg
    10861 cactttgcaa ggtgctcatc aaagcatcaa aatctttaat ctttaaagaa cttaaaattt
    10921 tttcacaacg cgtttcacaa tcataatttg gatcttcttc agccgttatt atctcaagct
    10981 cacctaaacg ctcattgatc tcatctgtaa attcctcgct catataaagc ttttcttttt
    11041 cttttaaagc ctcatataaa cgcttatttg cacacatcac cgcatctttg atggtgtagt
    11101 tttcaaaagc aaattgatcc tgtcctaaaa ctgcgatttt taaaccttca tcaaatacta
    11161 tttcaccact acttgactca atttctcctg aaagaatttt taaaaaagtc gattttcctg
    11221 caccattagc accaataagt ccgtatcttt gtcctctaac aagctttaaa ttaacatttt
    11281 caaataaaag ctgatttgca aaacgcat
//
LOCUS       DARBAC010000054        10767 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.054, whole genome shotgun sequence.
ACCESSION   DARBAC010000054 DARBAC010000000
VERSION     DARBAC010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10767
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.054"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..415
                     /locus_tag="SB799_001067"
     CDS             <1..415
                     /locus_tag="SB799_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868310.1"
                     /translation="DFDNGFEGFKDGISKNIDSIFQSEKFALLRLKIEKLSNLKSDLY
                     ELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHYEKNQKSKLESLEKVL
                     QSLKNQDANILNSFEENLEKIEKLKQLEMGLLNAD"
     gene            405..2234
                     /locus_tag="SB799_001068"
     CDS             405..2234
                     /locus_tag="SB799_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HEG0868311.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLSTEELDNVLNYAKSVFLKYFNELIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     ALKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQNYEKHLLLAYENFLKEIEILN
                     HQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFEALLINKPILTKI
                     AKNFLEQSQNLIQEKNKFLDLKKAELQKRRAQILNVRESIKED"
     gene            2234..2938
                     /locus_tag="SB799_001069"
     CDS             2234..2938
                     /locus_tag="SB799_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEG0868312.1"
                     /translation="MRIFLALFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKNLCE
                     KDISKACFSLAFMHESAKGVSKDLNQAYKFYDKACKLGLANACSNMALLLQNQGYKNE
                     ALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCTLGFGEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQE
                     ACAAYKELNSKDIELY"
     gene            3074..3802
                     /locus_tag="SB799_001070"
     CDS             3074..3802
                     /locus_tag="SB799_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEG0868313.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKVRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMSLADMES"
     gene            3804..5525
                     /locus_tag="SB799_001071"
     CDS             3804..5525
                     /locus_tag="SB799_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEG0868314.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNFIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSPYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVGGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            5814..6020
                     /locus_tag="SB799_001072"
                     /pseudo
     CDS             5814..6020
                     /locus_tag="SB799_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866324.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6083..6787)
                     /locus_tag="SB799_001073"
     CDS             complement(6083..6787)
                     /locus_tag="SB799_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868315.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEAKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNFVART
                     YQQNSQNNDIKFNIAS"
     gene            6894..7256
                     /locus_tag="SB799_001074"
     CDS             6894..7256
                     /locus_tag="SB799_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEG0868316.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFE
                     KILLCEKAMIEFYKPEKINIASFANYVPRVHFHVMARFKEDAFFPECMWGKQQREAIK
                     LDLPKFEEFVKFLNSKIF"
     gene            7330..7902
                     /locus_tag="SB799_001075"
     CDS             7330..7902
                     /locus_tag="SB799_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEG0868317.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDATIKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDTEIGGVVKGKDGKEKIGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
     gene            complement(7907..8863)
                     /locus_tag="SB799_001076"
     CDS             complement(7907..8863)
                     /locus_tag="SB799_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868318.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSRIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCLGKHHALILSKKNIASITTLIFIGVLSIILPRNT
                     TFNSAGLEFHFITLNFFKPVSELGFLFFLVGLILIFIKIFKTKEYYLIIAFFAAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYKLAFFDILTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYAKLILKQIAKILKRFRVKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(8924..9133)
                     /locus_tag="SB799_001077"
     CDS             complement(8924..9133)
                     /locus_tag="SB799_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEG0868319.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     ENSKKTHEELLHIEQTIQDEIAKFK"
     gene            9300..9722
                     /locus_tag="SB799_001078"
     CDS             9300..9722
                     /locus_tag="SB799_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868320.1"
                     /translation="MDFNSVLFSIGDKLPKDATSTVMLKKKFDRLNEDKQKEVVAQLP
                     MIKLKSPALVFWVGTFLFGAFGVGRFMIGDWVLGLIRLGITIVAMICGVLMITYSALG
                     IIYGLLWLVNWIWWIVDMFLVGKKLRKQNFEKIANIIQ"
     gene            9974..10327
                     /locus_tag="SB799_001079"
     CDS             9974..10327
                     /locus_tag="SB799_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002920535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868321.1"
                     /translation="MKCFNAKFMFVGILAVFLSACSSGIPKCSDQDVQNVLTEIILEH
                     NFGRFSEVDRKKLKFTYSGFMSDLTDKESKTQYCKAQVKANGSIDSRPYKWDAWIEYF
                     ARYTDDGMVYVEITR"
     gene            10377..10760
                     /locus_tag="SB799_001080"
     CDS             10377..10760
                     /locus_tag="SB799_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868322.1"
                     /translation="MDYNVFLLNIQDKINQEDFFNLKLKFEQLQNKKEALSNLVFLRL
                     QDPIKPLIMSMICGFLSLGWLAIDRFMIKDYALGILRIILSLFPCVLFLILGISYEND
                     SNLDISEIFLGCLEFFYYWALFGGE"
BASE COUNT         3886 a         1265 c         1876 g         3740 t
ORIGIN      
        1 tgattttgac aatggttttg aaggttttaa agatggaatt tcaaaaaata tagatagtat
       61 ttttcaaagc gaaaaatttg cacttttaag attgaaaatt gaaaaattaa gcaatctaaa
      121 atcagattta tatgagcttg aaacgaattt agatacggtt atttttgata cttttaaaga
      181 atttaaaatg agcgaaattt taaactcttt aaatatcaat ggagcatttt ttgagttttt
      241 aaatgataaa ttaaaacatt atgaaaaaaa tcaaaaatca aaattagaaa gtcttgaaaa
      301 agttttacag agtctgaaaa atcaagatgc taatatttta aattcttttg aagaaaattt
      361 agaaaaaatt gaaaaattaa aacaacttga aatggggctt ttaaatgcag attaatcttt
      421 taaatgattt tataaaagcc tatgaaaata cctatagtgt gagttttgat gatagtttta
      481 aagggcgtat tcaagagctt tgtaaggaac ttaacgagcc ttttatgcac gcaagttatg
      541 ctttagaaaa tgaattaaaa gagcttgtgt tttctttgga taagaatgtt aatatcgcta
      601 ttatagggca gttttcaagt ggtaaatcaa gtttgctaaa tttgatatta gggtgtgatt
      661 gtttgcctac gggtgttgtt cctgttactt ttaaacctac ttttttacgc tatgcaaaag
      721 aatatttttt aagagtagaa tttgaagatg gaagtgatat tatcacaaat atagaaaaat
      781 tagcctttta tacggatcaa agaaatgaag taaaacaagc aaaaagtttg catatttttg
      841 cacctattcc tttacttgaa aaaattactc ttgtagatac tccaggttta aatgcaaatg
      901 aaaatgatac tttaacaact cttgatgagc ttaaaaatat tcatggggcg atttggttaa
      961 gtttgattga taatgcaggt aaaaaaagtg aagaagatgc cataaaagca aatttggaac
     1021 ttttaggaga aaatagcatt tgtgtattaa atcaaaaaga taaattaagc acagaagaac
     1081 tagataatgt tttaaattat gcaaaaagtg tgtttttaaa atattttaat gagcttattg
     1141 ctatttcttg caaagaagct aaagatgagc aaagctatga aaaatctaat tttcaatctt
     1201 tgcttgattt tttaactcag ctagatacaa cagctttaaa agaaaaattt gttaaaagaa
     1261 aaattttaaa tttatgcgaa attttagaag atgaaaatca actttttgta ggtatttttg
     1321 atcgtttatt aaatcaattt caaaattatg aaaagcattt acttttagcg tatgaaaatt
     1381 ttttaaaaga gattgaaatt ttaaatcatc agattttaga acagcttaaa agcattagcg
     1441 aaagaatttc tagtgaaatt tttgcaagtg ttaaggaaaa agatgcttat ttttacaaag
     1501 aaagcaaagg atttttaaag aaagatttat atacaagata tgattataaa gcgccttata
     1561 tttcaagtga cgatgctttt ttggcgatgt tttataatag tgatgtgatg agtaaagagt
     1621 ttaaaaaaat caaaaatgaa ctttataaat cttttgaaga aattaagatg aaattaaaag
     1681 attttataaa catacttgaa agagaaattt tgctttttaa agcagaattt tcaaacatac
     1741 aaaaagatca cattttccaa agtgataaaa attttagcga attaagggct ttttgcaatg
     1801 caagcgatga gtactttttg aaagatttta aggagctttt atttaaaagt attttagagc
     1861 ttgatttatt ttttgaaaaa ttaaatctta aagcttttac aaattatgaa aatgctacga
     1921 aactaagcct tgcatttttt agtcgtaaaa tcaatgaaag ccgtgttctt tatgagcttg
     1981 atagttctga atttgtactt ttttatccca aaaaaagtga aatttatgaa agagttttaa
     2041 atgaattaaa tgtttatgag tttgaagctt tgcttattaa taagcctatt ttgacaaaaa
     2101 ttgcaaaaaa tttcttagaa caaagtcaaa atttaatcca agaaaaaaat aaatttttag
     2161 atcttaaaaa agcagaactt caaaaaagaa gagcgcagat tttaaatgtt agagaaagta
     2221 taaaggaaga ttaatgagaa tatttttagc tttattttta ttttttaatt cattatttgc
     2281 attaagtgaa ttagaagagg gtttaaaact ttacgaggca aataaatttg ataaagctta
     2341 tgaaattttt aagaatcttt gtgaaaaaga tatttctaaa gcttgttttt ctttagcttt
     2401 tatgcatgaa agtgctaagg gtgtgagtaa ggatttaaat caagcttata aattttatga
     2461 taaagcttgt aaattgggtt tagcaaatgc gtgttctaat atggctttgc ttttgcaaaa
     2521 tcaaggttat aaaaatgaag ctcttttggc ttttaataaa gcttgcactt taggagaatc
     2581 gttaagttgt aataatatag ctttatttta tgaaaaagaa aaagatggac aaatggcctc
     2641 aagtttttat aaaagatctt gtgacttaaa aaatgcaaga gcttgttatc agttaggatc
     2701 tttatatgat aaaggagaac ttgttaaagc aagtgtaaaa tctgctcttg ctttttattc
     2761 taaatcttgc actttaggtt ttggtgaggc ttgttatttg ctaggacgct ataatcaact
     2821 agaaaaacaa gatctaacaa aggcaaaaag atattttgga atggcttgcg atcaaaaaca
     2881 tcaagaagct tgcgcagctt ataaagaact taattctaaa gatatagagc tttattaaaa
     2941 gttctatttt cattactttc aaagatatac ttaaataaaa ttaagaataa cacaaaattt
     3001 atcgcttttt aaagttaaat ttatattaat aggactaata tagtcttgtt taaattatta
     3061 tcaaggagaa gtaatgcaag acaatattat tgatcgcaga agctttttta aactagggct
     3121 tctaggtggt tctgtagtag cagctagcac tataggtggc ggtgctgttt taaaggcagc
     3181 agaacttacg cattcgcatc aagcttcaca agggaaatca aataaagtta gaggtagaat
     3241 gttttttcaa actcaaactg aatttgatac cttaagtgca gcctgtgaaa gaatttatcc
     3301 taaagatgag caaggagaag gagctatagg tttaggcgtg ccttatttta tcgataatca
     3361 gctagctagt gcttatggtt ataatgatag agaatatatg caagggcctt tcatggaggg
     3421 caaagccgaa caaggctatc aaactcctat gcaacgcaaa gatatttttt tagaaggtgt
     3481 gcatgctctt gaagaaaatg ctcaaaagcg ttataaaaaa tctttttctt tgcttaaagg
     3541 tggagatcag gataaaattt taagcgattt tgaaaaagga aaaattcaaa ctacaggttt
     3601 taaatcttct tattttttca cacttttaag agatatgaca gtagctggag ttttagctga
     3661 tccaatttat ggcggaaatg ataataaaaa tggttggaga atgatgcaat atccaggtgc
     3721 acaaatgagc tatgtggata aaattgcaag tgatgaattt tttaacattg aacctatgag
     3781 tttagcagat atggagagtt aaaatggctg aagtattaaa aaaagtagat gtggtaacag
     3841 ttggagcagg atggactgga ggtatagtgg ctgcagagct tactaaagca ggtttgaatg
     3901 tacttagttt agaacgcgga catatgcaaa gtactgaaaa ttttaatttt atccatgatg
     3961 agtggagata cgggattaat tatggtttga tgcaagattg ctcaaaagac actgtgactt
     4021 ttcgccatga tcctagtggt ttagccttgc cttatcgtaa aatgggttcg tttttattgg
     4081 gtaataatgt tggcggtgca ggggtgcatt ggaatggttg gacttttagg tttatgcctt
     4141 atgactttga aattcaaacc ctaagcaaac aaagatatgg taataaatta ggtaatgatt
     4201 ataccttgca agattggggc gtgacttata aggatatgga gccttattat gatagatttg
     4261 aaaaaacctg cggggtatca ggtgaaccaa atcctttagc ggaaaaaatg ggagctttta
     4321 gatccagtcc ttatccacaa gaacctcttg aaaatactaa aatgcttaaa cgatttgaaa
     4381 gtgcagcaaa aagttcaaat ttacacactt atcgtttgcc agcttcaaat tctaaaggtg
     4441 gctatacaaa ccctgatggt caagatttag ctccttgtca atactgtgcg tattgtgagc
     4501 gttttggttg tgagtatggc gcaaaagcaa gtcctttaaa cacagtaatt ccaaaggcta
     4561 tgagcacagg taaatacacc atacgcactt atagcaatgt aacgcaaatt cttaaaaaag
     4621 acggaaaagt aacgggggta aaatttgtcg atactagaac gatgaaagag tatatccagc
     4681 ctgctgatat agttgtactt acaagttata tgtttaacaa tgctaagctt ttaatggtaa
     4741 gcaacatagg cgagcaatac gatccaaaaa caggtaaagg aactttaggt agaaattatt
     4801 gttaccaaat gaatatgggc acaacagctt tctttgatga gcaatttaac acctttatgg
     4861 gttcaggtgc tttaggaact acgagtgatg attttaacgg agataatttt gatcattcta
     4921 aggaaaaatt ccttcatgga gctatgattt atagcgttca gcttggaact cgccctatac
     4981 aatcagcccc acttccagca ggagctccaa cttggggtgc cgaatttaaa aaagcattaa
     5041 actataattt cacaagagct attacagtag gagggcaagg tgcttctttg cctcataaga
     5101 ataattattt aagtcttgat ccaacttata aagatgcttt tggtatgcca cttttacgct
     5161 taacttataa tttcaccgat caagatagag ctttgcataa atttatcaca gataaaacag
     5221 ctgaggtagc aaaaagaatg caaggagtaa aatcaatcaa aaaaggtgct tatcttaagg
     5281 attatagcgt tgtgccttat caatctactc ataacacagg tggaacaacc atgggcgcag
     5341 atagagaaac tagtgtggtt aatacttatt tacaacactg ggatgcggat aatctttttg
     5401 ttgtaggagc aggaaatttc caacacaata gtggatataa tccaactgat actgtgggag
     5461 ctttggctta tcgctgtgct gaaggtattt taaaatatca taaaagtgga aaaagcttag
     5521 cttgataata acttgagagt ttttgaaaac tctcaagatt ataaattttt aattttcttc
     5581 cgatatagta tataatatca aggaaagcaa aaatgattaa tggtataaat tcttattcaa
     5641 actacaatta tacaaaaagg caaatgtagt ctgctcttgg agggtggtat gcaagatgat
     5701 tactttaagt tcttttaata gatattttgg aaataatccc ctgcagacac ttactaaaat
     5761 tagagatgaa agtattgaaa atgcaaaaat ttaaattata aaaaggataa aaaatgttaa
     5821 atattttaca tgcaaattca agtcatcgtt tccataaatg tatgcctaag gaagttcatt
     5881 aaatatatga tactttaaag cttatggaac agcaagaaga tacaaaaaaa gtagaagcca
     5941 aaaaagaaga gcaaagtaat tctacaaata cagataaagc agataataaa aaagataaat
     6001 ttttagacat gtccgtttag ctttaaaaaa gctttattta taaggaagat tggcgtaaat
     6061 tttttattta aatctaagaa ttttaagatg cgatattgaa tttaatgtcg ttattttgcg
     6121 agttttgttg ataagttcta gcgacaaaat ttttaaagtc tttatcaaaa tttgaatttt
     6181 tatcgttgtt ttttgaatct ttatctgttt tttctaagct attttctgaa tttttgtcat
     6241 ctttttcttt attttcttct tctttttctt tggcttcttc ggctttaagt ttcattgctt
     6301 cagctcttgc ttcaaattcc atttttgtag catttgctgc aactttatag tcttgtgggc
     6361 taggatcagc aggagccata gctgctgctg cgatttgtct tgcattggct atagtttctt
     6421 ctggtgtgtt tcctttttgc atgctgatag gaacttcgcc cgctgtagca tacatttgat
     6481 tatcagggcc tcttgtgtaa gtaaaacttg cagcacctgc taagccgccg cccgctgctt
     6541 gatgtgcagc ttcatgagct tttacatttc tatcgatact ttggagttcg cgaacttgag
     6601 ctacttcttt ttggcttagc tctacgccat taaccatttg ggtttgttcg ccattttttt
     6661 ctttatcatc tttattttcg ctaagatttt tttcatcttt ttgagtggaa tcagattgat
     6721 ttgttttatc aaaagaaggt ttgctagagt agtaatcata agagttataa cttgaactaa
     6781 tttgcattta tcctcctttt tgttttttaa attttaggaa ttttaacgca ttttgactta
     6841 aaaatttgat aaattttgta aaataatcat aaatacaatt tcaaaggaat gtaatgattt
     6901 atgaaaatga tttgatttat atagagaaag aggaggctca agtgccttgg cttaaaattt
     6961 ttactaaaga aatttataaa gaatttagcg attgtccttt agagttgcaa aaagaacttt
     7021 ttgaaaaaat tttactttgt gaaaaggcta tgatagaatt ttacaaacct gaaaaaatca
     7081 atatcgcctc ttttgcaaat tatgtgccaa gggtgcattt tcatgttatg gcaagattta
     7141 aagaagatgc gttttttcca gagtgtatgt ggggaaaaca gcaaagagaa gcaataaagc
     7201 ttgatttgcc taaatttgaa gaatttgtaa aatttttaaa tagtaaaatt ttttaatttt
     7261 tattaatgat ttgttatgtt ttatctaata aaatttttat attgaaaatt actataaaaa
     7321 aggaaaaaaa tgaaaaaagt tttattaagt tcattggttg cggtgtcttt gttaagtaca
     7381 ggtttgtttg ctaaagaata tactttagat aaagcacata cagatgtagg ttttaaaatc
     7441 aaacatttac aaattagcaa tgtaaaagga aatttcaaag attattctgc ggtgattgat
     7501 tttgaccctg cgagtgctga atttaaaaag cttgatgcaa ctataaaaat cgcatctgta
     7561 aatacagaaa atcaaacaag agataatcac ttacagcaag atgatttttt caaagcaaaa
     7621 aaatatcctg atatgacttt tacaatgaaa aaatatgaaa aaatcgataa tgaaaaaggt
     7681 aaaatgacag gaactttaac tatagctgga gtttctaaag atatcgtttt agatactgaa
     7741 atcggcggtg tagttaaagg caaagatgga aaagaaaaaa taggcttttc tttaaatgga
     7801 aaaatcaaac gctctgattt taaatttgcg acaagtactt caactattac tttaagtgat
     7861 gatattaatt taaatatcga agttgaagca aacgaaaaat aattttttag tctaagagtc
     7921 ttgctcttag actttgtaaa tttttatcca aattttcttc actttcttgc caaatcaatt
     7981 taaaatccgg tttaaaattt tcattttcta aattaaattc cgtgtttttc aaggtggatt
     8041 ctaaaaaagc aagatgattt aaagcttgat ttttgtcatt aaaaattaaa ataaaatcat
     8101 tttctacgat aaaaattttt actctaaagc gttttaaaat ttttgcaatt tgttttaaaa
     8161 tgagtttggc atagctttct ttagtgtctt ttagttcatt aaaatggagc aaggcaatga
     8221 tatagttgtt ttttcccttt gtaaagcgtg taaggctttt ttcattaggt agctttgtta
     8281 agatgtcaaa aaaagccaat ttataagcgt gatttaaaag ataaaaacaa aaaactaaac
     8341 ttgcaaattc aaaatacctt attcctgctc cttcttgaaa taaaaactga aaatatgcag
     8401 caaaaaatgc gataataaga taatattctt tagttttaaa gattttgata aaaatgagta
     8461 ttaagccgac taaaaaaaat aaaaatccta attcactcac aggtttaaaa aaatttaatg
     8521 taataaaatg gaattctaaa ccagcactat taaaagtagt atttctaggt aaaatgatgc
     8581 ttaaaacgcc tataaaaata agggttgtaa ttgaagcgat atttttttta cttaaaatta
     8641 aagcatgatg ttttccaagg caaaatagag taaaaatcat aggtaaaaac aaagccacaa
     8701 ataaattagc ttgaaaaaaa cttgtataaa aataaggcaa cttagctcct aatagcacta
     8761 aagtcaaaaa gaaaattctt gaatttttaa agtaaaagga tagcacaagt gctgaaattt
     8821 caaaaataaa actcaatgat attaaaaaat ctaataaaaa catttcaaat ccttgatttt
     8881 aataaaagtg ataattgtat agaaaaaagc ttaaaagtgg actttattta aatttagcaa
     8941 tctcatcttg tatagtttgt tctatatgaa gtaattcttc atgagttttt ttactatttt
     9001 ctaaaagttc atcaaattta aagccaagca taacaatacg atataaattg ggtttatatt
     9061 ttctccaatt atataaagtg ctaacatcaa tgtctagttc atatgccata tcacgcttgc
     9121 tcttttttgt cattttttac cttaaaaatt tagcctttaa aaaattttac attaaaattt
     9181 ctttattaaa aacacttgaa atattcaatc ttttatataa aatatattta atatttcaat
     9241 attaattaag ttatagtatg gaataattcg agatattttt taattttcaa ggagtagtta
     9301 tggatttcaa ttcggttctt ttcagcattg gcgataaatt gccaaaagat gcaacatcta
     9361 ccgtgatgct aaaaaagaaa tttgatcgct taaatgagga taaacaaaaa gaagtagtag
     9421 cacagcttcc aatgataaag ctaaaaagtc ccgctctagt attttgggta gggacttttt
     9481 tatttggtgc ttttggagtg ggtcgtttta tgataggaga ttgggtttta gggcttatac
     9541 gcttgggaat tacaattgta gctatgattt gcggtgtttt aatgattaca tatagtgctt
     9601 tagggataat atatggtttg ttgtggcttg ttaattggat ttggtggatt gtagatatgt
     9661 ttttagtggg taaaaaatta agaaaacaaa attttgaaaa gattgcaaat attatacaat
     9721 aatttcgagt ttttatgaaa aacaatcaaa aataagtttg caaaatattt ttatcaagtt
     9781 tttagtaaat tttgtttttg tggcaagtga ggtttagaat tcttaagcaa taaagaaaat
     9841 tgcttttaaa tattttgtct gttgctctaa atattgcaca ggttttttta gagattacaa
     9901 gtaaaatggt gaacttggta cagatgaaga gaaactaaaa tattatttag gtgaacaaaa
     9961 aaggaggaaa ttaatgaaat gttttaatgc gaaatttatg tttgttggaa ttttggcagt
    10021 atttttgagt gcttgtagta gcggtattcc aaaatgtagt gatcaagatg tacaaaatgt
    10081 tttaactgag attattttag aacacaattt tggtagattt tctgaggttg atcgtaaaaa
    10141 gttgaaattt acttatagcg gttttatgag cgatttaacc gataaggaaa gtaaaacaca
    10201 gtattgtaaa gctcaagtaa aagcaaatgg aagtattgat tctcgccctt acaaatggga
    10261 tgcttggatc gagtattttg ctagatatac tgatgatggt atggtatatg tagaaattac
    10321 cagataactt tttaaggcaa aaatgcctta aaaagttaat tttgaggaga ctggatatgg
    10381 actataatgt ttttctttta aatatacaag ataaaataaa tcaagaagat tttttcaatt
    10441 taaagcttaa gtttgaacaa ttacaaaata aaaaagaagc tttatcaaat ttggtatttt
    10501 taagacttca agatcctata aaacctctaa ttatgagtat gatatgtggt tttttaagtt
    10561 taggttggtt ggcaatcgat agatttatga taaaagacta tgcattagga atattgcgta
    10621 taatattatc tttatttcct tgtgtgttat ttttgatact aggaattagc tatgaaaatg
    10681 attctaactt ggatatttct gaaatttttt tgggttgttt ggaatttttc tattattggg
    10741 cattatttgg tggggagtag atttatt
//
LOCUS       DARBAC010000055        10670 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.055, whole genome shotgun sequence.
ACCESSION   DARBAC010000055 DARBAC010000000
VERSION     DARBAC010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10670
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.055"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..272
                     /locus_tag="SB799_001081"
     CDS             <1..272
                     /locus_tag="SB799_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868323.1"
                     /translation="ISYLSQNDFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFAS
                     KVAEFYVFDSRVLMIVDKLENFKKFYKLKIDGIILKDNIDNFPKN"
     gene            317..3829
                     /locus_tag="SB799_001082"
     CDS             317..3829
                     /locus_tag="SB799_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HEG0868324.1"
                     /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGS
                     EQLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSG
                     AFWMAFIFTFIMGAQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIMAILAGMALF
                     SLSFESLYSSAYNQTDEILKEVAPLGIVLILFSCIEVFFAWRLPKLKQTNKDLVFNKK
                     DYIRGKLLINNLKLVFKNKTIWLCIIGFSFFWAISQLYLVSFPVFAKNELFIENTFYV
                     QISLAFSGIGVILGSLVAGKFSKNYIELGLIPLGALGMFLMAFLMPYFISLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFHAKENELGQILAGNNFFQNIAMLGFLLLATLFAKFEIN
                     VVYLFYFITLVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALL
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKESNLVCLFPEGTLSRHGQLNEFKAGFELACEYLSEDDGKIIPFYIRGLWGSA
                     FSRSDEEFSARNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHT
                     IARAWIDTAKKNLNQIAIIDTLAGDISYRKMLTLSLILNFFIKRKSKELNINPQRGSY
                     APKEEAIGILLPASFASSLTNLSVLIAEKIAVNLNFTAGEKALKAAIKNAQISQIYTS
                     KIFLEKLANKGINLNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKSIF
                     TPLKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTILPLLEGIKSITFSDPTDALGVAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTAFEMKFKKSIFEGYGATETTPVASVNLPNRFDA
                     DYWLIHRANKEGSVGMPLPGTAVHIVDPNNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVIKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCATSLEDEKKGEQIALLIECNNEIFERVCEAIKNSNIPTLFKPRYYFQIE
                     KIPLLGSGKVDLKKVKELAKNLAL"
     gene            complement(3837..4748)
                     /locus_tag="SB799_001083"
     CDS             complement(3837..4748)
                     /locus_tag="SB799_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEG0868325.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGIFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVK
                     KILSFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTIVVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESAAPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFISMPILIWALL"
     gene            5317..5780
                     /gene="traN"
                     /locus_tag="SB799_001084"
                     /pseudo
     CDS             5317..5780
                     /gene="traN"
                     /locus_tag="SB799_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853989.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
     gene            6046..8775
                     /locus_tag="SB799_001085"
                     /pseudo
     CDS             6046..8775
                     /locus_tag="SB799_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
     gene            complement(9260..9619)
                     /locus_tag="SB799_001086"
     CDS             complement(9260..9619)
                     /locus_tag="SB799_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEG0868326.1"
                     /translation="MKDLDYYLNLPYEIIIKKLDEKDGGGYFARYKDFPYIMGDGENE
                     IEALKDLKEAFKGALEVMLEKGDYIKEPIDNEAKIRINITLPKSLVEAIDTISDNRSK
                     FLADLANSAIKSYKIST"
     gene            complement(9623..9851)
                     /locus_tag="SB799_001087"
                     /pseudo
     CDS             complement(9623..9851)
                     /locus_tag="SB799_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881942.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
BASE COUNT         3758 a         1471 c         1712 g         3729 t
ORIGIN      
        1 tgatttctta tttaagtcaa aatgattttg aatttgctat tttagttcaa aataaagacg
       61 agatattttt agccaatgct ttaggggcta agtttttgct ttgtaatgat aaaaaacttg
      121 caaaatttgc tagtaaggtt gcagaatttt atgtttttga tagtagggtt ttaatgattg
      181 ttgataaatt agagaatttt aaaaaatttt ataaattaaa aatcgatgga attattttaa
      241 aagataatat agataatttt cctaaaaact gataaattct tttgcaaaat aagtgctaat
      301 tgacgaggtt taaataatgc aaaaaaaatc ttttttgaaa atttacggat taattccttt
      361 tttacttata gcattcatca atgcttttgt ggatttggga cataaaatta ttattcaaaa
      421 tactatttat aaggcctatg aaggaagtga gcagttattt ttaaatgcta tagttaatgc
      481 tttgatttta cttcctttta ttcttatgct ttctccttcg ggttttttag cggataaata
      541 tccaaaaaat attgtaatga aaatttcagc aattttcaat gttatactca ctttaataat
      601 ttgcatttgt tactatagcg gtgctttttg gatggctttt atttttactt ttataatggg
      661 agcacaagca gcgatttatt caccaagcaa atacggtttt attaaagaac tcgtaggaaa
      721 agactttctt gctatgggta atggtgtaat taatgcagta agcattatgg caatcttagc
      781 aggaatggct ttgttttctt taagttttga aagtctttat agttctgcat ataatcaaac
      841 agatgaaatt ttaaaagaag tagcgccttt aggaattgtg ctaattttat tttcttgtat
      901 cgaagtattt tttgcgtggc gtttacctaa gctcaaacaa acaaataaag atttagtttt
      961 taacaaaaaa gactatattc gtggaaaact tctaataaat aatcttaagc ttgtttttaa
     1021 aaataaaact atttggcttt gtataatcgg attttcattt ttttgggcta tatctcaact
     1081 ttatcttgtc agctttcctg tctttgctaa aaatgaactt tttatagaaa atacttttta
     1141 tgtgcaaatt tcactcgctt tttctggtat aggagtgatt ttaggctctt tagtagctgg
     1201 taaattttca aaaaattata tagaacttgg acttattcca cttggtgcat tgggtatgtt
     1261 tttaatggct tttttaatgc cttattttat aagtttatta agttatagtt ttttattttt
     1321 cttttttgga ttttgcggag ctctttttat cattccttta aatactttaa tccaatttca
     1381 tgccaaagaa aatgaattgg ggcaaattct tgcaggaaac aatttttttc aaaatattgc
     1441 catgttagga tttttactct tagcaacttt atttgcaaaa tttgaaatca atgtggttta
     1501 tttgttttat tttattactt tagtaacctt tataggaagt ttttatatac ttttaaaact
     1561 tcccttttct ttagtgcgta tacttttaag catagctttt ttgcaacgat accgcttact
     1621 tgtagaaggt tttgaaaata taccagaaaa aggcggagct ttacttttag gtaatcatat
     1681 ttcttttatt gattgggctg ttgtgcaaat ggcaattcca agaaaaattt attttgttat
     1741 ggaaagaagt atttattcta aatggtatat taaaattttt cttgataaat ttggtattat
     1801 tcctgtatca agtacaggaa gtaagacgag tttagaactg atagcaaagc atatcaaaga
     1861 aagtaattta gtttgcttat ttcctgaagg tacgctttca agacatggac aattaaatga
     1921 atttaaagca ggatttgaat tagcttgtga atatttaagc gaagatgatg gaaaaattat
     1981 tcctttttat ataagaggac tttggggtag tgctttttca agaagcgatg aagaattttc
     2041 agcaagaaac cgcactttaa ataaaagaaa aattgctata gcttttggta aagctatgcc
     2101 tttgcattct aaaaaagatg aagttaaagc taaagttttt gaactttctt ttatggcttg
     2161 gaaatcacaa tgcgaagcta tgcatactat agcaagagct tggatagata cagctaaaaa
     2221 aaatctaaat caaatagcta ttatcgatac actagctgga gatatttctt atagaaaaat
     2281 gttaactctt agtttaattc tgaatttttt tattaaaaga aaatccaaag aattaaacat
     2341 taaccctcag cgtggaagtt acgctcctaa agaggaagct ataggaattt tattacctgc
     2401 ttcttttgca agttctttaa ccaatctatc tgttttaatc gcagaaaaaa ttgcagtaaa
     2461 tcttaatttt actgctggag aaaaagctct aaaagcagct ataaaaaatg cgcaaatttc
     2521 acaaatttat acttctaaaa tttttttaga aaaattagca aataaaggta taaacctaaa
     2581 tttcgataca aatatacatt taatttattt tgaagatatt gtagaagatt ttaaaatgca
     2641 aaaaactaaa atttttagca tgatgttagc agttagtatt atacctagtt ttatactcaa
     2701 aagcatcttc actcctttaa aaaacaatct tgccatcgca gctattttat ttagtagcgg
     2761 aagtgagggt tctccaaaag gtgttatgct caataaccgt aatattttaa gcaatatagc
     2821 acaaatttct gatgtgcttt gcacaagaaa taatgatgtc attctctcat ctttgccacc
     2881 ttttcatgct tttggactta ccgtaactac gattttgcct ttgcttgaag gtattaaaag
     2941 catcactttt tcagatccaa ccgatgcctt aggggttgcc aaagctgttg ctaaaaataa
     3001 tgtcactatt atgtgtggaa cttcaacctt tttaggaatt tatgcaagaa ataaaaagct
     3061 tgatgcttta atgtttgaaa gtttaagaat agttgtatcg ggcgctgaaa aactaaaaaa
     3121 tgaagtaaga actgcttttg aaatgaagtt taaaaaaagc atttttgaag gttacggggc
     3181 tacggaaacc acgcctgtgg cgagtgtaaa tttaccaaat cgttttgatg cggattattg
     3241 gcttatacat cgtgccaata aagaaggaag cgtaggaatg cctctacctg gaactgcagt
     3301 gcatattgtt gatccaaata attatgaaaa tttaaaaaca aatgaagatg gactcatact
     3361 tataggcggt catcaagtta tggtaggcta tcttaatgac aaagaaaaaa ccgatgaagt
     3421 gattaaagaa attgatggta taagatggta caacacggga gataaagggc atttagatga
     3481 agatggtttt ttatatattg tcgatcgtta ttctcgcttt gcaaaaattg gcggagagat
     3541 gatttcttta ggtgcaatag aagaagaaat tgccaaattt atagacactg aagtggttaa
     3601 attttgtgcc acatctttag aagatgagaa aaaaggggaa caaattgctt tactcataga
     3661 atgtaataat gaaatttttg aaagagtatg tgaagctata aaaaattcta atatacctac
     3721 actttttaaa cctagatatt attttcaaat agaaaaaatt cccctcctag gttcaggaaa
     3781 agttgatctt aaaaaagtta aagaattagc taaaaattta gccctataat ttgagcttac
     3841 aacaaagccc aaattaaaat tggcatagaa ataaaagcaa aaagaactcc aaaggctaca
     3901 gcgcttacgg ctaaattact atctagttta gctttcatta ccatagctcc tgctaaagtc
     3961 atagtaggag ctgcactttc tataatagca acgatagtag aatcttttaa ttctaaatta
     4021 aatattttta aacaaaatac aaaaaataaa ggagctaaaa tcattttagc aaagatgaca
     4081 actattgtag gtttgtaaga ggttttaatc gccataaagc caagtcctaa acctatagca
     4141 aaaagtgcaa caggggttgc agaggcacca aataaacgaa taggagagaa aataaattca
     4201 ggtaaagtaa ttaatttgca caaaaaacca aaaagcaaag ctaaaaaagg tggaaaacta
     4261 agaatttttt taacattagc aagtaaactg actttttctc catttcccaa agaaagtata
     4321 aaaggtccaa aaagtgatat aggtaaagtt gtggctaaag catcgtaaaa tataacttca
     4381 gcgctaaatt gtgggtcatt aaatatacca gcaacaatag gcatacccac aaatatagta
     4441 tttccaaaac aagaaagcaa aaacatactg actaaagtta ctttagaaaa atgaaaaact
     4501 tttccaataa gaatagcaaa aaaagctgct agtatacagc taaacaatcc aataaaaata
     4561 aaaataatca atgaaaaatc aaaatttaaa tgatatgctt tatcgaaaat caaacaaggt
     4621 aaagcaaaaa taatagcaaa atctaaaaaa gtcctagctt gtttttgctt taaaacgcca
     4681 attcttttgg caaaatatcc gcctgcaagt aaaataaaaa ttgtaaataa tggtataaaa
     4741 acaaacattg aataatcctt tttaagggat ggtttttgaa aacggataga attatattct
     4801 ttatacttaa aaaaaatctt aatatttttt aagtttttta aaaaaaccaa tattttttat
     4861 tttttgtaac tttaagaaat tgtaagttga aatttgattt tgaatagttg gtattttaag
     4921 ttgaatgatt ataattttaa ataatggtgc ggtttaatct taattaaaat actatatatt
     4981 gtatttagaa tgatataaaa acaataaatt aatatagctt ttgtttttaa tttttgaata
     5041 tttttaaact tatttaggcg gagatcatct gctttagtta tttttatttt taatattcac
     5101 gcaataagac agatttattt tgaaagttta tcttattgct tttcttattt tcactgtgca
     5161 tcatttgaat ttgaaattat ttttttcaat ttctttaagg ttgtatagcg gttttttcac
     5221 atttgcgctg attttgtatt tttaataata aggtttcaaa tagttcagta tctataaata
     5281 ttcaatggac aagataatcg ttgtaaaaat tgggatatgt ttggcggttt acttggtggt
     5341 ggatgttgtg ataaggataa tgtattttta ggatttgtac cttgtaaaga agataagaaa
     5401 aagcttgcta aattaaacga tgcaggaaaa tgtcatgaag taggaactta ttgttctaaa
     5461 aaggttagtt taggttttac taaaatttgc gttgaaaaaa gaaaagtttt tgttgcttca
     5521 attctaaatt aggaagaatt ttcaatgaac aaggacgccc tcagcttgga aaagggtgga
     5581 gtagtgcgga aggtccgcaa tgcaaaggct tcactcctga agaatttcaa aaattagatt
     5641 ttagcgaaat tgatttaagt gaattcattg ctgatattgt aggaagtttt gacacaggaa
     5701 aaatacaagc tgattctgtg aaaatacaag aaaagattca aaacaatatc gagaatgtaa
     5761 cgaaaaaacc tacaaattaa aaaagaaaat aaattattag aaaggagaga agcttagtta
     5821 aaagtttgtt tggtaagcca caagggagtt tcgcccctta agaaaagggg caaggctaat
     5881 aagccttgac agtaattata caaattagta taattataag tatgagtcgt gtcatatagt
     5941 tcaccccctt tctagggtgt gattatgcca cagggttgca gccttgtggc aaaaccctta
     6001 atgcaattat accaaacaaa ctctttaact tctttaatat agtccatgaa aagattttac
     6061 ttgttattcc ttagcacttt gttttttgca ccttcatttt tatttggtgc aactgaaata
     6121 gctaatggaa atctaattta tacttggggt tacggcgatg taatgaatga aatcatgcaa
     6181 gcggttaaag gaataaccac tgaaacaagt tatatcgtta atgcagcctt agctatttca
     6241 ttattacttt ttagtattaa aaaagcaatg gatggacaaa caaaccctgt gtttgaattt
     6301 ggaaaaatgt ttgtactttt tgctgtagtg tgggtcatgt ttttaaaagc accaaatgac
     6361 aataatcacc gcttcatgat tcatgatgaa gtcactagca aagattatgt catttctcaa
     6421 attcctatag gtataggaaa aagctttgca ttaatgacac aatttgagaa ggttatctta
     6481 gaagctatgg aaaaacattt ttcaactcca caatctacaa atttctctaa tgcaggttta
     6541 ggtttttcac ttcaagtaat gagtacttta ccaagtgtaa agctttcggc tattgatgca
     6601 actttgcaaa aaaatattga tttttacttt agaaactgcg tttcagtagg tatcttgctt
     6661 aatcaacaag gtagaaatct ttttcaaaac tctgataatt taatgcaaga tcttttcaca
     6721 aacataggca atggctctca gcttactcct ttgttcacaa ataacaataa tattgaagaa
     6781 caaagtgttg tgccttgttc tgatgcaggt cctcaaatcg ttgaaatgat tcaaaaagat
     6841 acagatgaag ctatgaagat ccatgctgct ttgcttggta tggtagatga tatgacaaat
     6901 tatgagcaaa agttcttagg cgctgcacaa atctataacg aacaagctgt aagtgctaga
     6961 tcttatttgc aacaatccat gataatgctt gcttctcaaa atgcaatcat taataccgct
     7021 aaatcagtag gattaaatcc tgcttctgtg gctgcaaata ctgcttatgc ggatcagcaa
     7081 ttttacgcaa gtatgcacaa gcacaaggac acttggcgca aacttatttg cctttagcta
     7141 aagcttattt aacagctatc atcataggtt tgtcttggct tgttgctttg ctttctattg
     7201 tgtttggctc ttacgcacat attaagatgt tttttactct atgtatttgg atagtgcttt
     7261 ggactcctat actttgtatt attaatttta taaatgattt taatcttatg aatgttgcac
     7321 aagtaataac aggtggaaaa gcagctttaa gcttaggaga taacatgctt atctttaaag
     7381 aagtagcaaa tagatcaaat ttcatgaatt accttgtaat gagtactcct gttttagctt
     7441 atgctatagc taaagcaagt gagcaaggat ttgtaacttt tgcttctgga ttatctcaag
     7501 ctctaacagg tgcttcaaaa gctgctggaa gctttgcaaa tcagcaagcc ttatctacac
     7561 aaactagcat tgctactcct agaggagatg aagtttggtc gatgaatgca ggggtagcat
     7621 cgcttcaata tgcaagaaat atagatggtg tggttactaa atttaatact caatcagtta
     7681 tgggtgataa tacaaagaat tctgaaatct ctaatgcaaa tatgacagga acaaatgttg
     7741 atggtatgat gtcaggcgcc aaacttagcg caggaactat gacaactgtt aatagcgtat
     7801 ctcaagcaaa ttctgatgct tggaataaaa actttaatga tcaatattca catatgagtc
     7861 aaagcggtag agcaagtgca tttaaatgaa gctaaaggat ttatggagaa aggagatgaa
     7921 gcatttaaga aggcttttgc aaataatatt ggacaagaga ttcaaaatag aactgattta
     7981 actagcgaag aaaaggcgga aattgcatta gcagcttctg ctcatgcagg ttttagcgtt
     8041 cttggaaatg gtgctgaaat tcaatcaagt gcaagttcaa aaagaggtat aggaaatgtt
     8101 gaaacttttt cagaagctca aaaagctgca tataatgaaa taatggaaag agcttctctt
     8161 aaaactctat ctaccacaaa aggtatggat tcttcttgga gtaatacgct ttcaggtggc
     8221 gattctacag cttattcaaa aatggttgga tatactcaaa gctataccca aacagaacaa
     8281 ggtattcaat ctgttagtac taataatatt gacaatacac ttaatgtggt tgcaagagat
     8341 cttgctgctg gagataataa agactttagc aatcttaata cagctcaaca aaatgaatac
     8401 tttgcaaaag cagataatta tgtatccgat atggttaaga atgatcctgc acaacttgca
     8461 caatataata gtcaatatgg cgctcaaagc attgttagtc caaataacac tactatgcca
     8521 cacgctgcag gtatgaattt taaaaccatt gatggatcag aaagaagtgt tttaactcaa
     8581 tctaatttaa atcaagatca agtaaatcaa agtagtaaaa gaacaagcaa cactacaaca
     8641 atgccagata gtcaagaagt taaaagcgga gcaactcact cgcaaatagc tcaagataat
     8701 aaaaaaggaa gtaatgctat tagggaaact tctaaaaatt ggaatcctat tggaaaagat
     8761 actccttcta tttaaacaaa aggctttata gccttttgtt taaagataaa atagaatcta
     8821 aaatagcaca atttacagaa aaagctataa aaaacaacga taatataaaa actaatgcaa
     8881 taaaagcaat tacgacagat ttaacagttg ttaatactcc taaataaact ccaattaaaa
     8941 tcgaaattga aattagtaag agaaaacata agagaaataa aattttatta attattttag
     9001 tttccctttt ttctgtattt ctgtttttta gaaaaatcat ataaaaactt aaaattgaaa
     9061 aaaacaacac aataaatatt aaaaagctaa caactaagta tgtggaaagc ataatattac
     9121 tccttgacta ataacttatt catattttta ataaaattat accatatttt aataaatttt
     9181 gaaagtattt ttgctataaa atgcctattt tttagtggtt tgaaacggat ttcttttttt
     9241 tatttaacta tgtcaatttt taagtgctta ttttataaga ctttatagcg ctatttgcaa
     9301 gatcagctaa gaatttactt ctattatcgc ttattgtatc tattgcctct actaagcttt
     9361 taggcaaggt aatattaatt ctaatttttg cttcattatc aataggttct ttaatataat
     9421 cacctttttc aagcataact tctaatgctc ctttaaatgc ttctttgaga tcttttaagg
     9481 cttctatttc attttcacca tctcccataa tataagggaa atctttatat cttgcaaaat
     9541 atcctccgcc atctttttca tcaagttttt ttataataat ttcataaggt agattaagat
     9601 agtaatctaa gtctttcatc attcattctc ctgttatagc ttttaaaacc attttgacat
     9661 atatagcctt tatagggcgt ttaaatggaa tagtaataag atcacattct tcttttcttg
     9721 aattgataat gtgatccgcc tttattaaaa cattcataac cttcgctttc taataaaatc
     9781 ttaagcgttt caaagcgcac attgttagga ttatttttta aatctttaat aattttatct
     9841 tttttactca ctataatatc cttatgagta tgtattatac acacttttta ttaagtatca
     9901 cttataaacc gatcgcaatt cttttaatct tgttgtcttt gtatgtttaa ttgaaagtat
     9961 taagactgag attattgagc tgcgttttga aacggatttc ttttttattt gacttggaaa
    10021 aatgaatgag aatttgtagt ttcatgtact aacaaaggca aggggctttt ctgtcctgcg
    10081 gttttgttaa aaatacttcc attttaaact taaaaaacct aaagtttaga tataatctca
    10141 caaaacgctt actatgtcgt ttcatagtta gccttgattg ataaatttcc gccaagagtg
    10201 aaaactcaag gcggattttt tattatagcg aatcttgttt tttgcttttc taatttttta
    10261 ccaatctttt ctattttttt gtaaaagtat ttttgctatg aatttctcat aaccgaaagc
    10321 cacgtctctt tcggttaaat gttttttagt ataaatgtat taagcttaga ctaagcgtgg
    10381 tttttataaa atttttcaat gattatatca aatgagcttg attatctcat taattaattc
    10441 taagacaaga actaaaaatt caatgatctt actcatcatg tctctttctt gtaaccgaaa
    10501 gagtagccat gcctaatatg ctttaattat agtatttttg aataaatgtt ttatcatctt
    10561 attgattatt tgtgtgatag aatttccttt ccgcaaatca atgcacctta atacttttag
    10621 tctcttgtta attttcttat ttttggatat ctttataatc aaatacaaaa
//
LOCUS       DARBAC010000056        10650 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.056, whole genome shotgun sequence.
ACCESSION   DARBAC010000056 DARBAC010000000
VERSION     DARBAC010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10650
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.056"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1221
                     /locus_tag="SB799_001088"
     CDS             <1..1221
                     /locus_tag="SB799_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEG0868327.1"
                     /translation="LKQYDEKFWDILIQEDLFTAKNTWVKFFAPSSTSSIVINKHQFL
                     RLGGNDENFIGHGYEDFDLFARILKACVSFEKMPTNLSYDARNWNFFNFKGFRSWFSL
                     LGHEACFYGIYMYHFYHIEPNQNAYMQNKDKNHQLFYKHLKNIKKHDLKPLQVFKAKG
                     EKVLMLFKDQNYDFKDISVYVGETIYKNISDFFIAKELKYKLLLDFLQQEKITKIFLD
                     ASIKEEIDGIDYCDVFYFQKGILPHSWFFAKNLDLDYKQDLILSEQKLYQVKEYFLTL
                     KKDEKKVILDFLSQNNDDKCDLYEMLYYLINEVYSFEHDGIFYQIIIDKEKMLMAQKH
                     DKSFYPLGSFIYKPYLYELKSIRPFSFLMKILGLEYLGAMISHTKFYRLTRKLFFNPK
                     GFFEDLRAKKNANV"
     gene            1208..2257
                     /locus_tag="SB799_001089"
     CDS             1208..2257
                     /locus_tag="SB799_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002912505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0868328.1"
                     /translation="MQTYKCLVKPKISVIIPSYNSAKYIKECLDSVIFQSLKEIEILC
                     IDAYSIDGTIDILKSYKKQDDRIKIIFSKKKSLGYQINLGLKEAEGEYFTIVESDDYV
                     KIDMCEKLYRLACNQDCQVVKSDFIGFEDKENERIFKNLSICYDQALYNKKTNSYLNP
                     SIIINSWNMNQSSLYKMDFIKKYNIRANETKGASYQDIGLWFQILSLASSIYFCQEGF
                     YFYRQDNENASVKSKDKIYCVCDEFEFLDKFFDKNLELKSRLQDVFYYFKFKIYSWNL
                     KRIDDKYKLEFLYKFSQDFSLIYDKLDKTVFKASEISEISCIIQDPSKYYKKYNSVFY
                     SIKKKIFRIKRKYFR"
     gene            2261..3631
                     /locus_tag="SB799_001090"
     CDS             2261..3631
                     /locus_tag="SB799_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0868329.1"
                     /translation="MNKTVGVVIPIYNVEKYLKECLDSVVNQTYKNLQVVLVNDGSTD
                     ENSFNIAKEYTLKDERFILFDKKNGGHSSAKNVGIEYFSGEYILKNKTQILEKNSLIE
                     FNIEGNNPYEIYTVYKSYEAFHTTKDFYPSIDYIIFLDSDDYWELDCIEECVKRMNDV
                     DVLWFDYKFLNKNKTTQMEIYNYTKEQIITPLQWLKRTREIGNYLFWYAWQGMIDFTF
                     LQKINIKFINQIIHEDHHFGIALFSMTDNIYIYPEKKYIYRFRESSVSNQKQYSINTN
                     SYLYTLYIEFDKNTYELKRYQMSMNWIFTCLELIKVLKYNSNNEISILVEQTFLPTLL
                     DRTLIIFFIDKDPLLLKNKLQELKDYFEKFHLSGAECLKYQLSYRLGQFVLSNYRSLR
                     GLIKIVLNAKKVILNIQKEQELFQEIIKNYPFIVFSSSSEDLESRKIKKHYSYRLGKF
                     LKIILI"
     gene            3681..4637
                     /locus_tag="SB799_001091"
     CDS             3681..4637
                     /locus_tag="SB799_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002912510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEG0868330.1"
                     /translation="MKVILITGGTGFLGSNLCKRLLSEGNKIICVDNNYTGRMENIKE
                     LLENENFTFIEHDICEPLKITQKLDQIYNFACPASPPAYQGKYAIKTTKTSVYGAINM
                     LEIAKEHNATILQASTSEVYGDPLVHPQNEEYRGNVNPIGIRACYDEGKRCAESLFFD
                     YHRHEGVDIKIIRIFNTYGENMDPNDGRVVSNFICQALSGKDITIYGDGLQTRSFCYV
                     DDLIDIIIKVMNSSKDFQGPINTGNPGEFTIKELAQKVIEKTGSKSKIIYKDLPLDDP
                     TQRRPDISLAKTKFNWEPKINLDEGLEKTIKYFKEKITEFKG"
     gene            4643..5941
                     /locus_tag="SB799_001092"
     CDS             4643..5941
                     /locus_tag="SB799_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEG0868331.1"
                     /translation="MKIGIIGTGYVGLPTGVGLAELGNDVICIDREKPKIDALNSGNL
                     TIYEDNLEELFHKNVKEGRLKFTTSMQEGIKDADLVIIAVGTPPHPVTKEADMKYIHA
                     AATELADYLTGYTVIATKSTVPVGTGDDIESLISKKNPNAEFDVLSLPEFLREGFAVY
                     DFFNPDRIIVGTNSQRAKAVIEKLYEPFRGKSELLFVSRRSSETIKYASNAFLAIKIH
                     YINEMANFCEKAGADILEVAKGMGLDTRIGKRFLNPGPGYGGSCFPKDTLAMAFMGKQ
                     NDIDLTLINAAIKGNEERKNHMCERILNSVKDIKNPKIAVLGLAFKDGTDDCRESPAV
                     DIVFKLLEQKVKICAYDPKAMDLAKQILGDKIDYANSMYEAIKDADAIAILTEWKEFS
                     SLDLKKAYDLLNHKKIIDLRNLIDKNEAIKLGFEYQGIGR"
     gene            5938..6912
                     /gene="galE"
                     /locus_tag="SB799_001093"
     CDS             5938..6912
                     /gene="galE"
                     /locus_tag="SB799_001093"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEG0868332.1"
                     /translation="MKNILVVGGAGYIGSHTLKHLLDNNYNCIVMDNLIYGHKQAIDK
                     RAKFIHADLLDTFSLTSVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLL
                     NAMLEYNVKDIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAY
                     GLRHISLRYFNAAGASKDGLIGESHEPETHLIPLVLKAIKGEIPAINVFGNDYDTEDG
                     TCIRDYIHVEDLALAHRLALENLHKFSGCINLGTGIGTSVKEIISAAEIVSGKKCLIN
                     YAPRREGDPARLYADNKKAKEILSWEAKYTDIKDIIQSAWDWENNREY"
     gene            6914..8017
                     /gene="glf"
                     /locus_tag="SB799_001094"
     CDS             6914..8017
                     /gene="glf"
                     /locus_tag="SB799_001094"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HEG0868333.1"
                     /translation="MKKVKNLIVGCGLSGAILAERLASKGQEVLIVDKREHIGGNIYD
                     YKDQESNVTVHKYGPHVFHTSIKEVWEYLSRFTKWHYFMYRVKAFIDGKEVNIPFNLD
                     TLHKVFPEYLAKELEQKLISKFAFNSKIPILELKNANDKDLEFLAEYIYKKVFLGYTV
                     KQWGVKPEELDFSVSARVPVYISRDDRYFVDTYQAIPKDGYTKMIENIINHPLIKVQL
                     NTDFKDIKKDIEYERLFYTGAIDEFFDYKFGKLPYRSLNIVFETFDKEYMQSGPQINY
                     PENYDFTRSVEYKYYLDEKSNKTILSYEFPCEYEEGKNERYYPIPNDENQKLYEKYLN
                     EAAKLNNVYFLGRLGDYKYYDMDKTVERVLKIK"
     gene            8060..9340
                     /locus_tag="SB799_001095"
     CDS             8060..9340
                     /locus_tag="SB799_001095"
                     /inference="COORDINATES: protein motif:HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868334.1"
                     /translation="MNNFYDKKIKKKEALLIMAATHDYLFAVANVLIGLKKYSQNMFD
                     DIIIYTDKNAKEQDKNAICKIFSDIIFKEYTFQISNLEDRERLKYFSNMPYARFEMLT
                     YLDRYKKVVWFDSDFLIVDDIRGLLNYGKTGISMSLDLYPYPTNHSIRDFFIDEIDEI
                     DMNATAYASGLIIFSDALKNPLEIRKYLYQKLEQYSSKLKYAEQGILQMMIEKFDLKV
                     DIFPKDIYHVFSYENKNNAKLIHLLGYNKPWKVYLGSAYDEWYDNHKEWINLGGTEAF
                     TFVELLKLNKEEFFNSLDLYSSYKNQFYFFGDKRYQNLLFFQYELNSKCSGAVLLVKS
                     HLSYKIGNAIVNTRPYKLPFVIVKIFVFHIFSKLIFKSIININPTLNKLKLEQYDDYL
                     DALQIKESHLYKIGAMFLKNPLYFLKNRATKNKF"
     gene            9350..10561
                     /locus_tag="SB799_001096"
     CDS             9350..10561
                     /locus_tag="SB799_001096"
                     /inference="COORDINATES: protein motif:HMM:NF025751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4422 domain-containing protein"
                     /protein_id="HEG0868335.1"
                     /translation="MRNNLIKIFIGYHKPDFLIKSNIFEPIFLGREIYTQETKDGYIT
                     DSGFSFLSENMLQDNIGFNISHLNRYFCELTGIYWIWKNYSNLYNLDYIGFMHYRRHF
                     ISKDLSSFLKLDSDARYSYIINKIDYTYIKYINDFLKDKIECDLIIPYMFDFKKSLFH
                     EINIEEFFCRQHGLTNASFKTLEYIIKYKYPDYYDIFIEFSKGTAYYPCNMFIMKKEL
                     FCKYCTFLFDIMFSLFDIFEEMLKNLDSLWEKRNLAWISEFVSTLFFLKYIRDNHNNV
                     EFLPISFVQNTIENKMVGAVKIVENHLSYKIGKKIIHSKGLINILLLPFSIICIYFNH
                     YLEKYIYNISIKYNPNSKRIKLEEYSDYDEAVRIQNYLSYKIGKIFVKNPFLFAIRLY
                     FLKKERKNEKK"
BASE COUNT         4087 a         1064 c         1736 g         3763 t
ORIGIN      
        1 ttaaaacaat acgatgagaa attttgggat attttgatac aagaggattt atttacagca
       61 aaaaatactt gggtaaaatt ttttgcccca agttctactt caagtattgt gataaataaa
      121 catcagtttt taagattagg tggaaatgat gaaaatttta ttgggcatgg ttatgaagat
      181 tttgatcttt ttgctagaat tttaaaagct tgtgtgagtt ttgaaaaaat gcctactaat
      241 ttaagctatg atgctagaaa ttggaatttt tttaacttta aaggttttag atcttggttt
      301 tcattgcttg gtcatgaggc ttgtttttat ggaatttata tgtatcattt ttatcatata
      361 gaacccaatc aaaatgctta tatgcaaaat aaagataaga atcatcagct tttttataag
      421 catttaaaaa atatcaaaaa acatgattta aagcctttgc aagtttttaa agccaaaggt
      481 gaaaaagttt taatgctttt taaagaccaa aattatgatt ttaaggatat tagtgtttat
      541 gtgggagaaa ccatttataa aaatataagt gattttttta tagctaaaga gttaaaatat
      601 aaacttttgt tggatttttt acaacaagaa aaaatcacta aaatattttt ggatgcaagt
      661 ataaaagaag aaattgatgg tatagattat tgtgatgttt tttattttca aaaaggaatt
      721 ttacctcatt cttggttttt tgcaaaaaat ttagatttag attataaaca agatttaatt
      781 ttaagcgagc aaaaacttta tcaagtgaaa gaatatttct taactttaaa gaaggatgaa
      841 aaaaaagtta tcttggattt tttaagccaa aataatgatg ataagtgtga tttgtatgaa
      901 atgctttatt atttgattaa cgaagtttat agttttgagc atgatgggat tttttatcaa
      961 atcatcattg ataaagaaaa aatgctgatg gcgcaaaaac atgataaaag cttttatcct
     1021 ttaggatctt ttatttataa accttatttg tatgagctta agagtataag acctttttca
     1081 tttttgatga aaattttagg tttagagtat cttggtgcta tgatttcaca tactaaattt
     1141 tatcgtttga caagaaaatt gttttttaat cctaaggggt tttttgagga tttgagagct
     1201 aaaaagaatg caaacgtata aatgtttagt taaacctaaa atttctgtta ttatcccttc
     1261 ttataattcg gctaaatata taaaagaatg tttagacagt gtgatttttc aaagtttaaa
     1321 agagattgaa attttatgta tagatgcgta ttcaattgat ggaactatag atatattaaa
     1381 atcatataaa aagcaagatg atagaattaa aattattttt tcaaaaaaaa agagtctagg
     1441 ttatcaaatt aatctaggat taaaagaagc tgaaggagaa tattttacaa tagttgaaag
     1501 tgatgattat gtaaaaatag atatgtgtga aaaactttat agattagctt gcaatcaaga
     1561 ttgccaagta gttaaatctg attttattgg ttttgaagat aaggagaatg aaagaatttt
     1621 taaaaacctc tctatatgtt atgatcaagc tttatataat aaaaaaacta attcgtattt
     1681 aaatccaagt attattataa attcttggaa tatgaatcaa tctagtcttt ataaaatgga
     1741 ttttattaaa aaatacaata taagagcaaa tgaaacaaag ggtgcttctt atcaagatat
     1801 aggattatgg tttcaaattt tgagtttggc ttcaagtatt tatttttgtc aagaggggtt
     1861 ttatttttat agacaagata atgaaaatgc ttcggttaag agtaaagata aaatatattg
     1921 cgtctgtgat gagtttgagt ttttagataa gttttttgat aagaatttag agcttaaaag
     1981 tagattgcaa gatgtttttt attattttaa atttaaaata tattcatgga atttaaagcg
     2041 tattgatgat aagtataagt tagaattttt atataaattt tcacaagatt tttcacttat
     2101 ttatgataag ttagataaaa cagtgtttaa agctagtgaa atatctgaaa tttcttgcat
     2161 tattcaagat cctagcaaat actataaaaa atataatagt gttttttata gtataaaaaa
     2221 aaagattttt agaataaaaa gaaaatattt taggtaaaag atgaataaaa cagtaggcgt
     2281 agttatccca atctataatg tagaaaaata cttaaaagaa tgtttagata gtgttgttaa
     2341 tcaaacttat aaaaatttac aagttgtact tgtaaatgat ggtagcactg atgaaaactc
     2401 atttaatata gctaaagaat acactttaaa agatgaaaga tttatacttt ttgataaaaa
     2461 aaatggtggt catagttctg ctaaaaatgt cggcatagag tattttagtg gagaatatat
     2521 acttaaaaat aaaactcaaa ttttagaaaa aaattcttta atagaattta atatagaagg
     2581 taataatccc tatgaaattt atacagtata taaaagttat gaagcttttc atactactaa
     2641 agatttttat cctagtatag actatattat ctttttagat tctgatgatt attgggaact
     2701 tgattgcata gaagagtgtg taaaaagaat gaatgatgtt gatgttcttt ggtttgatta
     2761 taagttttta aataaaaata aaacaactca aatggaaatt tataattaca caaaagaaca
     2821 aatcattact cctttgcaat ggttaaaaag gactagagaa ataggtaatt atttattttg
     2881 gtatgcttgg caaggaatga ttgactttac ttttttgcaa aaaattaata ttaaatttat
     2941 caatcagatc atccatgaag atcatcattt tggtatagcg cttttttcta tgactgataa
     3001 tatatatata tatcctgaga aaaagtatat atatcgtttt agagaaagca gtgtaagcaa
     3061 tcaaaaacaa tatagcataa atactaattc ttatttgtat actttataca tagaatttga
     3121 taaaaatacc tatgaattaa aaaggtatca aatgtctatg aattggattt ttacttgttt
     3181 ggaattgata aaagttttaa aatacaattc aaataatgaa atatcaattc ttgtcgaaca
     3241 aacatttttg cctactttgc ttgatagaac tttgattatt ttttttatag ataaagatcc
     3301 gttgttgctt aaaaataaac tgcaagaatt aaaagattat tttgaaaaat ttcatttaag
     3361 tggagcagaa tgtcttaaat atcaattgtc ttatcgttta gggcaatttg ttttatctaa
     3421 ctatagaagt ttaagaggtt tgataaaaat tgttttaaat gctaaaaaag tgatattaaa
     3481 tattcaaaaa gaacaagagt tgtttcaaga aataatcaaa aattaccctt ttattgtttt
     3541 ttcttcttct agtgaagatc tagaaagtag aaaaatcaaa aaacattatt cttatcgttt
     3601 agggaaattt ttaaaaatta ttttaatata agctagtttg aattataata agttttatag
     3661 aaattaagga agtatttata atgaaggtta ttttaatcac cgggggaacg ggatttttag
     3721 gttctaattt atgtaaaaga ttgcttagtg aaggcaataa aattatttgt gtagataata
     3781 attatacagg cagaatggaa aatattaaag aacttttaga aaatgaaaat tttactttta
     3841 tagagcatga tatttgcgag ccattaaaaa tcacacaaaa acttgatcaa atttataatt
     3901 ttgcttgtcc agcttctccg cctgcttatc aaggaaaata tgctataaaa acaacaaaaa
     3961 caagtgtata tggtgctata aatatgcttg aaattgcaaa agagcataat gcaacgattt
     4021 tacaagcttc aacttcagaa gtttatggag atccactcgt tcatccacaa aacgaagaat
     4081 acagaggcaa tgtaaatcct ataggaattc gtgcttgtta tgatgaggga aaaagatgtg
     4141 ctgaaagttt gttttttgac tatcatagac atgaaggcgt ggatattaaa ataataagaa
     4201 tttttaacac ctatggagaa aatatggatc caaatgatgg cagagttgtt agtaatttta
     4261 tatgccaagc tttaagtgga aaagatatta caatttatgg agatggttta caaacacgtt
     4321 ctttttgtta tgtggatgat ttaattgata ttattattaa agtgatgaat tcttcaaaag
     4381 attttcaagg gcctataaat actggcaatc ctggtgaatt tactataaaa gaattagcac
     4441 aaaaggttat agaaaaaaca ggttcaaaat caaagattat ttataaagat ttaccattgg
     4501 atgatccaac tcaaagaaga cctgatattt ctttagctaa aactaaattt aactgggagc
     4561 caaagataaa tttagatgaa ggtttggaaa aaactataaa gtattttaaa gaaaaaatta
     4621 cagaatttaa aggatagaat atatgaaaat aggaatcata ggaacaggtt atgttgggct
     4681 tccaactggt gttggtctag cagaacttgg aaatgatgtt atttgtatag atagagaaaa
     4741 accaaaaatt gatgccttaa atagtggaaa tttaacaatt tatgaggata atcttgaaga
     4801 gctttttcat aaaaatgtaa aagaaggtcg tttaaaattt acaacttcta tgcaagaagg
     4861 cattaaagat gcagatttag taattatagc agtaggaact ccaccgcacc cagttacaaa
     4921 agaagcagat atgaagtata ttcatgcggc tgcaactgag ttagcggatt atttaacagg
     4981 atatacagta attgccacaa aatctactgt tcctgttggc acaggcgatg atatagaaag
     5041 tttaattagc aagaaaaatc caaatgcaga atttgatgtt ctttctttac ctgagttttt
     5101 aagagaaggt tttgcagtat atgatttttt caatccagat aggattatag taggaacaaa
     5161 ttcacaaaga gcaaaagcag tgatagaaaa actttatgag ccttttagag gaaaaagtga
     5221 gttgcttttt gtaagtcgcc gttcttcaga aactattaaa tacgcctcaa atgcattttt
     5281 ggctattaaa attcattata ttaatgaaat ggcaaatttt tgtgaaaaag ctggagctga
     5341 tattttagaa gttgctaaag gtatgggtct tgatactagg ataggaaaac gctttttaaa
     5401 tcctgggcct ggatatggag gttcatgttt tccaaaagat actttagcta tggcttttat
     5461 gggtaaacaa aatgatatcg atttaacttt aatcaatgca gctattaaag gcaatgaaga
     5521 gcgtaaaaac catatgtgcg aaagaatttt aaatagtgtt aaggatatta aaaatccaaa
     5581 aatagccgta cttggactcg cttttaaaga tggcactgat gattgtagag aaagtcccgc
     5641 tgtagatatt gtttttaagc ttttggaaca aaaagttaaa atttgtgctt atgatccaaa
     5701 ggctatggat ttagctaagc aaattttagg agataagatt gattatgcta attccatgta
     5761 tgaagctata aaagatgctg atgcgatagc tatattaaca gaatggaaag aattttcaag
     5821 ccttgattta aaaaaggctt acgatttgtt aaaccataaa aaaattattg atttaagaaa
     5881 tttgattgac aaaaatgaag ctataaagtt aggttttgaa tatcaaggta taggtagatg
     5941 aaaaatattt tagttgtagg tggtgcagga tatataggct cacatacctt aaaacattta
     6001 ttagataata attacaattg tattgttatg gataatctta tctatggaca caaacaagct
     6061 atagataaaa gagctaaatt tattcatgca gatttattag atactttttc tttaactagt
     6121 gttttcaagc aagaaaaaat agatgcccta gtgcattttg cagcttttgc ttatgtggga
     6181 gaaagtgttg taaatcctgc aaaatattat caaaataatg tagtaggaac tataaatctt
     6241 ttaaatgcaa tgcttgaata taatgttaag gatatagtat tttcaagcac ttgtgcaact
     6301 tatggagaac cacaatacac cccaattgat gaaaaacacc ctcaaaatcc tattaacgct
     6361 tatggaagaa ctaagcttat gatagagcaa gtttttgctg actatgaaaa agcttatggt
     6421 ttaaggcata tttctttaag atattttaat gctgcgggtg caagtaagga tggacttatc
     6481 ggagaaagtc atgaacctga aacccattta attcctttag ttttaaaagc tataaaagga
     6541 gaaattcctg ctataaatgt ttttggaaat gactatgata ccgaagatgg aacttgcata
     6601 agagattata ttcatgtaga agatttagcg ttagctcatc gcttagcctt ggaaaattta
     6661 cataaattta gcggttgtat aaatcttggt actgggatag gtacaagtgt aaaagaaatc
     6721 atcagtgcag ctgaaattgt aagtggtaaa aagtgcctta taaattatgc accaagaaga
     6781 gaaggggatc ctgcaagatt atacgcagat aataaaaaag caaaagaaat cttatcttgg
     6841 gaagcaaaat atactgatat taaagatatt attcaaagtg cttgggattg ggagaataat
     6901 agagagtatt aagatgaaaa aggtaaaaaa tttaatcgta ggttgtgggc ttagtggggc
     6961 tattttagct gagcgtttag ctagtaaagg acaagaggtt ttaatcgtag ataaaagaga
     7021 gcatatcggt ggaaatattt atgattataa agatcaagag agtaatgtaa ctgtacataa
     7081 atatgggcct catgtttttc atactagtat aaaagaagta tgggagtacc tgagtcgttt
     7141 tacaaaatgg cattatttta tgtatagagt aaaagctttt atagatggta aagaggtaaa
     7201 tatcccattt aatcttgata ctttacataa agtttttcca gaatatttag ccaaagaact
     7261 tgagcaaaaa ttaataagta aatttgcttt taattctaaa attcctattt tagaattaaa
     7321 aaatgcaaac gataaagatt tggaattttt agctgagtat atttataaaa aagttttttt
     7381 aggctataca gtaaaacaat ggggtgtaaa acctgaagag cttgattttt cagtaagcgc
     7441 aagagttcct gtatatataa gtcgtgatga tagatatttt gtagatactt atcaagctat
     7501 accaaaagat ggttatacaa aaatgattga aaatataatc aaccatcctt tgataaaagt
     7561 acaattaaat accgatttta aagacataaa aaaagatata gaatatgaaa gattgtttta
     7621 tacgggagcg attgatgaat tttttgatta taaatttgga aaattgcctt acaggagttt
     7681 aaatatagtt tttgaaacct ttgataaaga gtatatgcaa tcaggtcctc agataaacta
     7741 ccctgaaaat tatgatttta caagaagtgt tgagtataaa tattatcttg atgaaaaatc
     7801 taacaaaacc atactttctt atgaatttcc ttgtgaatac gaagaaggta agaacgaaag
     7861 gtattatcct atacccaacg atgaaaatca aaagctatat gaaaaatatt taaatgaagc
     7921 tgctaaactt aacaatgtgt attttttagg taggcttggc gattataaat actatgatat
     7981 ggataaaacc gtggagagag tgttaaagat taagtagatt gttttttata ttcaaataag
     8041 attgaaggga ttgatgatta tgaataattt ttatgataaa aaaataaaaa aaaaggaagc
     8101 tttgttaatt atggctgcaa ctcatgatta tttgtttgct gtagctaatg ttcttattgg
     8161 attaaaaaaa tattcacaga atatgtttga tgatatcatt atatatacag ataaaaacgc
     8221 aaaagaacaa gataaaaatg cgatatgtaa aatattttca gatattattt ttaaggaata
     8281 tacttttcaa atttcaaatt tggaagatag agaaagatta aaatattttt caaatatgcc
     8341 ttatgctaga tttgaaatgt tgacttattt agatcgatat aaaaaagttg tctggtttga
     8401 tagcgatttt ttaattgttg atgatattag aggtttgtta aattatggta aaaccggcat
     8461 ttcaatgtct ttagatctat atccttatcc gaccaatcac tctataagag atttttttat
     8521 cgacgaaatc gatgaaatcg atatgaatgc cactgcttat gcttcaggtt taattatatt
     8581 ctctgatgca ttaaagaatc ctttggaaat aagaaaatat ctatatcaaa aattagaaca
     8641 atattcttca aaactaaaat atgctgagca aggtatattg caaatgatga ttgagaaatt
     8701 tgatttaaaa gttgatattt ttccaaaaga tatatatcat gtattctctt atgaaaataa
     8761 aaataatgca aaattaattc atttattggg atataataaa ccttggaaag tttatctagg
     8821 aagtgcgtat gatgaatggt atgacaacca taaagaatgg attaatttgg gtggaactga
     8881 agcatttact tttgtagaat tacttaagtt aaacaaggaa gaatttttta attcgctaga
     8941 tttatattct tcttataaaa atcaatttta tttttttggc gataaaagat atcaaaattt
     9001 attatttttt caatatgaat taaatagtaa atgttcgggt gctgtattat tagttaaatc
     9061 tcacttatct tataaaattg gaaacgctat cgtaaataca agaccatata agctcccgtt
     9121 cgtaatagta aaaatttttg tattccatat tttttcaaaa ttaattttta aaagtattat
     9181 taatattaat ccaaccttaa ataaattaaa attagaacaa tacgatgatt atttagatgc
     9241 attacagata aaagaaagtc atttatataa aattggagct atgtttttga aaaatccact
     9301 ctatttttta aaaaatagag caactaagaa taaattttaa gatttatcta tgagaaataa
     9361 tttaataaaa atttttatag gttatcataa accagatttt ttaattaaaa gtaatatatt
     9421 tgaaccgata tttttaggca gagaaatata tactcaagaa actaaagatg gttatattac
     9481 tgatagcgga tttagttttt tatcagaaaa tatgttacaa gataatatag ggtttaatat
     9541 atcacacttg aatcgttatt tttgtgaatt aactggtatt tattggatat ggaagaatta
     9601 ttccaaccta tataatcttg attatatagg ttttatgcat tatagacgtc attttatttc
     9661 taaagattta tcaagttttt taaagcttga ttctgatgct agatattcat atattattaa
     9721 taaaattgat tatacttata tcaaatatat aaatgatttt ttaaaagata aaatagaatg
     9781 cgatttaatt attccttata tgtttgattt taaaaagagt ttgtttcatg aaataaatat
     9841 agaagaattt ttttgcagac agcatggttt aactaatgct agttttaaaa ctcttgaata
     9901 tattattaaa tataaatatc cagattatta tgatatattt atcgaatttt ctaaaggaac
     9961 tgcttattat ccatgtaata tgtttataat gaaaaaagaa ttattttgta aatattgtac
    10021 ttttttattt gatataatgt ttagtctttt tgatattttc gaagaaatgc taaagaattt
    10081 agattcttta tgggaaaaac ggaatttggc atggataagt gaatttgtct caactttgtt
    10141 ttttttaaaa tatattcgcg ataatcataa taatgttgaa tttttgccta tttcttttgt
    10201 gcaaaatacc atagaaaata aaatggttgg tgctgttaaa attgttgaaa atcatttatc
    10261 ttataaaata gggaaaaaaa ttattcattc taaagggcta ataaatattc tattgcttcc
    10321 attttcaatt atatgtattt attttaatca ttatttggaa aaatatatat ataatatatc
    10381 tattaaatat aatccaaatt ctaaaaggat aaaattagag gaatatagtg attatgatga
    10441 ggctgtgaga atacaaaact atttatctta caaaattgga aaaatatttg ttaaaaatcc
    10501 ttttttgttt gcaattagat tatatttttt aaaaaaagag agaaaaaatg aaaaaaaata
    10561 aaattattct atcagcaagg gctgacggtt ttggagaaag aatattggcg atgcttaatg
    10621 ccatgttcgt ttctcaagtt acggattata
//
LOCUS       DARBAC010000057        10607 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.057, whole genome shotgun sequence.
ACCESSION   DARBAC010000057 DARBAC010000000
VERSION     DARBAC010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10607
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.057"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(63..620)
                     /locus_tag="SB799_001097"
     CDS             complement(63..620)
                     /locus_tag="SB799_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEG0868336.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKDTMLHMVP
                     AKTRDANAKAFDLGIKYATQAKPHS"
     gene            complement(617..1462)
                     /locus_tag="SB799_001098"
     CDS             complement(617..1462)
                     /locus_tag="SB799_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEG0868337.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHVVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKSRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1463..2587)
                     /locus_tag="SB799_001099"
     CDS             complement(1463..2587)
                     /locus_tag="SB799_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HEG0868338.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKIYNRKKFEGDKNDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2596..2907)
                     /locus_tag="SB799_001100"
     CDS             complement(2596..2907)
                     /locus_tag="SB799_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEG0868339.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(2922..3791)
                     /gene="sucD"
                     /locus_tag="SB799_001101"
     CDS             complement(2922..3791)
                     /gene="sucD"
                     /locus_tag="SB799_001101"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEG0868340.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKQALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3801..4964)
                     /gene="sucC"
                     /locus_tag="SB799_001102"
     CDS             complement(3801..4964)
                     /gene="sucC"
                     /locus_tag="SB799_001102"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEG0868341.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFNVDEAVSNAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIVKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(4965..5867)
                     /locus_tag="SB799_001103"
     CDS             complement(4965..5867)
                     /locus_tag="SB799_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEG0868342.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSSVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFDDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(5864..8068)
                     /locus_tag="SB799_001104"
     CDS             complement(5864..8068)
                     /locus_tag="SB799_001104"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEG0868343.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILATFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFASVDGKKEILKEGLKLEKNEI
                     LDATFMDVQKLQEFYAKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSEGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNIA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCSNHKAKILAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(8185..10428)
                     /locus_tag="SB799_001105"
     CDS             complement(8185..10428)
                     /locus_tag="SB799_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002862769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HEG0868344.1"
                     /translation="MRILFKDNEFFIDNDLLFLKLTLQRQNKELIADIKKLLLKDYDL
                     NIDGNLSINTKSEFYYFQGRASGELLDFNASISYKDKNLAYKIEDLNIRNIMEIFKRV
                     NKRIELPQSLNLWVAYRAKGEFYHLDYLQGFIDFAKDNYYLDNISASGYVNNVKVRLD
                     DKMNAIEIPKLDLNLNKQKLDFVFNKAFYNGADLSSSKVYLYDLFDEKKAGIYLRIKS
                     DNLKFDEKLAKALEDYHFSLPFYQKSGKIKSDLELKIDFHDKGEISYSGILALENASI
                     SLADFNITKAFVKLNQNDLNIENASVKNSFLEADFNAKFDLQKQQGNFNTQISRLYFD
                     NGELLDLKNQNVEVKLDYSQNVNISIPQWNLILNFKDGLEANLNNPKILFSFSPLLKK
                     FGFIDAKNVYYKTLNFEDFNASVNDAYFKNNLLINGQTPYENDSFDIVKNKGIMEIHT
                     QSDTASAKISSDNKEIHLKNLSYIYKKDSNSSNSTFDISTNTQNISFGGANVALILPD
                     SNKTLAFDRVEADLKGNALDLKGSRGNAKFDLYYSSNDLNLNVSNIDDNYLNEFLQKQ
                     AVRDGVFNLSIKGSGLEYFDGQIDFKNTYVKDLRGINQLISFIDTVPSLLMFKSPTFN
                     QKGLSLHDGKIIFNRKKDLLSVSAINLNGDSVDIYGLGSANLRLNTVDFSLELKTLKS
                     ASEAISKVPILNYVILGKNQEISTNLKIDGSIDDPKFHTEILTDTLKTPFNLIKNIIQ
                     LPANLLN"
BASE COUNT         3371 a         2100 c         1312 g         3824 t
ORIGIN      
        1 tttaaatttt atttgcaatg tgtaaaattt tagaagttaa attccgcatg gtgcggaatt
       61 tattatgaat gtggttttgc ttgagtggcg tattttatac ccagatcaaa agctttagca
      121 tttgcatcac gagtttttgc aggaaccata tgaagcatag tatcttttaa aacatctaaa
      181 tctatacatt tactcatata agcagcaatt gcaagtgcta caactgattg agtagccaca
      241 tttcctacct catctttagc tatggtaata ataggaattt caaaaatttg ccatttttta
      301 taatcttcac tttcaggatg tactaaattt ggctctacaa ctatgatacc tccttctttt
      361 acacccccac gaaaaccttt ataaccctta tctgcagtcg aaagcataaa atctacttcc
      421 ccttctacag cataaggaaa taaaatttct ttatcatcga tgataatatc caccttagta
      481 gggccaccac gcacttgtga agtgtaagta gaagccttaa aagcttgacg accttcttta
      541 atggctgctt ctgctaaaat ttctcctgcg gtgataacac cttgtccacc ttcaccgcca
      601 aatcttaatt gatatttcat tttaaagctc ctaaatccac cattcttttt tctttggctg
      661 cacgacgtac ttcttcataa gcgtggcagt attctggctg agaattatcc tcatgcaaaa
      721 ttcctgttgg aaatttatct tttctttctt caaaatccat gctttcaaat ttagctttat
      781 ccacaacgcg acttttaatc caatcaagca tagctacagc ttcacccatt ttgttttttc
      841 tacctagatt gatatgacaa tttgaaaaaa catctacaaa actataaccc ttatgcgcta
      901 aagccttata aattaaattt tcaagcttat tagcttcgat cacattaccc cttgccacaa
      961 aagaagctcc tgcagcttta gttaattcac acgcatcaaa attagggtca atatttccaa
     1021 attgagctgt tactgtataa aaaccttttg gagtggttgg gcttgtttgt gaattcgtaa
     1081 gtccatagat aaagttattg atcacaacgt gggttaaatc aatatttctg cgacaaccat
     1141 gtatagtatg atttccacca attgccaaag tatccccatc tccgcttact acaataacat
     1201 gtttactagg attggctaat ttaatacctg ttgcataagc tattgctcta ccatgagttg
     1261 tatgaactgt attacaattt acataagaac tcattctacc actacaacct atacccgaaa
     1321 caagacaaac atcatccata ttccaaccaa gtttttctat cgcacggata atacatttta
     1381 aaacaacgcc atcgccacat ccccagcacc actgagtagg cattttatct actcttagat
     1441 attcatcata attaaaagcc atttatatat tctcctttac cttagcaata atttcacttg
     1501 gagtgatagg acgaccattt gcacggtgca agctaataaa atcgcgacgc gaagttactc
     1561 tttcaatctc ttcaagatat tgtcccatat taagctcgct taccattact tttttaaatt
     1621 tgcttacaac ttcagcaatt tttttctcag ccactggata aagagtaatt ggacggaaaa
     1681 gtcccacttt aatcccttgc tctcttaatc tttgtatagc ttcttttgct gaacgactta
     1741 cgcttccata agcaatgatt aaaaattcag catcatcaag catatattct tcataagtgc
     1801 aaatatcttc ttgattgttt ttaattttac ctatgagtct ttccatattt tttttcacta
     1861 tgactccatc ttcagttgga aaacctatgt ctccatgatg aagtcccgta acatgataac
     1921 gataacctgt aaagaaagga tttaaagttg caggctcatt ttctcctgct gcataaggct
     1981 tgtaatcgtt tttatctcct tcaaattttt tgcggttata aattttaata tcttttaaat
     2041 caggtaaaac tgctttacca ttcatgtgcc ctacagtttc atccataagt aaaaatacag
     2101 gagtcatata tttttcagct aaattaaatg ctctaatggt ttctgtataa gcttcttcaa
     2161 gacttgcagg agcaatagca atacttgcaa aatccccatg agttggtgct ttagcttgaa
     2221 acaaatctcc ttgtgctaca cgagttggaa gacctgtcga aggaccacct ctcataacat
     2281 ttacaatcac aagtggaatt tcagcaataa atgcaagtcc tatttgctct gcttttaaag
     2341 aaattccagg accgctactt gcagtcatgg attttactcc actcattgcc gcaccaatag
     2401 ccacgctaat acctgaaatt tcatcttcca tttgtataaa agttccatca tttgcaggaa
     2461 gcatatggct taattcatga gctatctcgc tactaggagt aataggatag cctccaaaaa
     2521 atttacatcc acaatcaatc gcagctttgg cgattaaaac attacctgtt gctataactt
     2581 ctctcattat ttttcctatg ctaatttttt gtatttgtta ttttttacgg ctacagctct
     2641 atctttagcc tcagcagtaa gtttggcaaa tttaaattca tctctttttg ccaccataat
     2701 agcaaaatca gggcaatgtg tctcacactc ggtacagcct atacaggatt cagggtgtac
     2761 cacctctatc atttgtccta aaaccgcatg cacatcatcg cgcatagcta aaaccccagc
     2821 ggggcaatag ctaacacaaa tattgcatgc cttacatcta tgctcatcta cccaaacagg
     2881 ggtatctttt ggagctgtca tactcatgtt tttttccttt attaacctaa tattttttga
     2941 atttcttcac caattaaagc cggagaatcc accacatgaa ttccataact tttcaaagct
     3001 tgttttttag ctgcagcgct ttcatcagca cttcctacta tggcacctgc atgtcccatt
     3061 cttttgcctt taggagcagt tgcacctgca atgaatgcta ccacaggttt gctaatattt
     3121 tctttaataa atttagccgc ttccacttcc aaactaccac caatttcacc tatcattaca
     3181 atagctttag tttcatcatc tttttggaat tcacttaaaa gttctttata agcaagacct
     3241 atgataggat caccgccaat tcctactgca gtagaaattc cataaccacc ttgaactacc
     3301 tgattagcag cttcataagt taaagttcca ctttttgaaa taagccccac gcaacctttt
     3361 ttaaaaataa aacctggcat aatacctaac ttacattctt cagaagtgat aatacctgga
     3421 caatttggtc caatgatttt catacccttt ttattggcat attgcttagc aaacatcata
     3481 tcctttacag gcgtatgctc tgtgattaca actgcaagct taatacccgc atcagctgct
     3541 tcaatcacgc tatcacccac agcaaaagca gggacaaaga tcaagctcac gtcagccttt
     3601 gttgccttaa ccgcatctgc aacggtatca aaaactggtt tacctaaatg agtttgtccg
     3661 cctttatgag gggtgacacc tccaactata tttgtaccat aagccatgca ttgctcagcg
     3721 tgaaaagttg cttctttacc cgtaaaacct tgaactatta cttttgtatt tttattaacc
     3781 aatatactca ttttctatcc ttatcctact aaacttttta caagctctgc accgttttta
     3841 agattggttg ctgctttgat atttttaaga tttgaattat ctaaaattgt ttttgcttct
     3901 gctgcgttag tgccatcaag acgcactaca attggaatat ttacctcaac attcttagta
     3961 gcttctaaaa ttccatttgc tatcctatca caacgaacaa taccaccaaa gatattgata
     4021 aatataactt ttacattctt atctcttaaa ataatttcaa aagcctttgc aacagtttca
     4081 ggagaagctc ccccacctac atctaagaaa tttgcaggtt ttgcaccact ataattaata
     4141 atatccatag ttgccattgc tagacccgca ccatttacca tacaagctac atctccatct
     4201 aatttcacat agcttaagcc aaattcagcc gcttctcttt cagcaggatt ttcttcagta
     4261 atatctctaa gttcagcaat ttcaggatga cgataaagcg cactatcatc aaaactgcat
     4321 tttgcatcaa gagcataaaa atccccttct gcagttttaa ttaaaggatt gatttcaagc
     4381 atattcatat ctttatccat gtaaagctta taaagtttag ctatcataga aatgagtttt
     4441 ttgccttcat ctttatcaag tcctaaaact ctcgctactt caagtccatg aaacatttta
     4501 aatccaattt gtggatcaat acctactttt acaatttttt caggactttc tttggctact
     4561 ttttctatat ccatccctcc ttcacttgaa gcgataatgg taatttgctc tgccattcta
     4621 ttaaacaaaa tagccaaata atactctttt actatattag cgccactttc tatataaagt
     4681 ttttgcacaa gtttgccttc aggtcctgtt tgatgagtta ctaaattcat tcctaaaatt
     4741 ttacttgcat aatcttttac ctcatctaaa ttcttagcga ttttaacacc accaccaaga
     4801 ccacggcctc ctgcgtgaat ttgagcttta actgcccaaa cactaccgcc taattcttta
     4861 gcattagata cagcttcatc tacgttaaat gcaacttttc cctttaaggt agggatgcca
     4921 ttgtctgcaa aaattgcttt tgcttgatac tcatgtatgt tcatttattc tcctttatat
     4981 tgatatttga ttaaagattt ttctaatttg tctttttctt gcaaactaag atccattttc
     5041 atgatttcaa tcacaccttc aagtcctaat cttgccataa ctcctaaggc tttgttttgc
     5101 actccaaatt ccccatgtaa aatcacactc ataggtaaaa actcgccact tcttatggac
     5161 tcaagcattc ttatacaagc actagcaggg gctaaataag ctgaagtttt aagatgtttg
     5221 attactttag ctccacctgt ttttacttca ttttctaaat catcaaattc ttcttcattt
     5281 aaaaattcgc ttatattttt atttttaaca ctcgcataag attttaccaa aaccatatca
     5341 tcattatgaa aaccaataag tcttgtatcc acacttgaca ttttgacatt aagttttttg
     5401 gcaagttcat acttaaatct tgcattgtct aaaactcctg ccatggctat aattttcttt
     5461 gatgaaaaaa tcccgctttc ataaagagta ttaagtagaa aatccacagg attagttaaa
     5521 ataataaaaa gcggatcttc tgtaaaatct ttaatttttt tagcacaatc aagcataatg
     5581 cttgtattta actgaagcaa ttcttctcta ctttgcccat cttttctagc aaaacctgca
     5641 ctaaaaagca ctatatctga atttttggta tgagtataat ctttagtgca aagtaaatct
     5701 atatttaaat ttaaagcagc tatgctttga gtaagctcta attcttttgc ataaagcaaa
     5761 tcctcattga tatctactaa aacaatttca tttgctattt ctcttaaaat caaagcataa
     5821 gctacgcttg agcctacatt gccagcccct ataacagtga ttttcatctt tgtcctattt
     5881 tttctaaaat agcgttaaaa gttgcacttg gacgcatgat tttatttgct ttttcatcat
     5941 caaatttata atacccaccc aaatccactt tcacaccttg cgcatcgtta aattcggctc
     6001 tgattttttc ttcattagaa gaaagctcta gggcaatatc tttaaaaaag ctttgaagct
     6061 ccatatcact tgcctgtctt gctaaatgat ttgcaaaata cattgctaag taaaaatgac
     6121 ttgttctatt gtcatcttct ttaacttttc ttgatggagc tttattattt tcaagccatt
     6181 cgcctatagc ctcatcaaga cattctgcta aaatcttagc tttatgattg ctacacttat
     6241 ttgcataaaa ttccaaactt gcttgcaaag ccaaaaattc acccaaacta tcccaacgca
     6301 gatgattttc ttcaactaat tgttctactt gtttaggtgc tgaaccccct gctcctgttt
     6361 caaacatagc tccaccattt aacataggca caacagaaag catttttgca cttgttccaa
     6421 gctctaaaat aggaaaaaga tcggttaaat aatcccttaa aacattaccc gtgatagaaa
     6481 taacatcttt accttctcgg attaactcta aacttcttaa acaagcttct tttggagtta
     6541 aaatggctat atttttaccc ttttctttta aacgattttg taccaaagtt atcatgattt
     6601 tattactagc tcttttgcta tctaaccaaa aaatagcttc ggctccacta agttctgatc
     6661 tttctatacc taaatcaatc caatttaaca ccgcatcaaa tttagcctga ttagctctat
     6721 aaatatcacc ttttctaacc ttatgttcta ataaaacttt accctcagaa actattttaa
     6781 aagttccttc ttctttagcc acaaaggttt tatcgtgcga gccatattct tgagcctttt
     6841 tagccattaa acctacatta gatacactgc caagttttga aggatttaaa gtgccatttt
     6901 tatgcaaatc ttcaataacc gcctcataaa tagttgcgta agtttgatca ggaattacgg
     6961 catttgtgtc cttttcctta ccttccttat cccacaatct tgcgccattt ttaagcattg
     7021 caggcataga agcatcaacg ataacatcgc ttggaacatg aagatttgtg atgcctttat
     7081 ctgaatttac catagaaata tctgcagatt tagctaaaat ttcattgtat ttttttaaaa
     7141 tttcatcttt tttgcttgaa ttttcgatct tacttaaaag ctcacttaaa ccattatttg
     7201 gattaatacc taatttttca aattcatctt gaaattcgat aaataattct ttaaaaaata
     7261 cttttaccgc ataaccaaaa agtataggat cacttacttt catcattgta gcttttaaat
     7321 gcaaagaaaa aagcacatca tcatctttgc ttgctttaat ttcttttgca taaaattcct
     7381 gaagtttttg cacatccata aaagtagcgt ctaaaatttc atttttttca agttttaagc
     7441 cctcttttaa aatttctttt ttaccatcaa cgcttgcaaa ttctatatta gccacacaat
     7501 cttgatcgat taaaaccgct ttttcattag agaaaaaatc cccttctttc atgtaagaaa
     7561 cacgagtttt tgagtttgga ttaaactcaa ccacacgata aggattgttt tttgcatagt
     7621 cttttaccgc ttttgttgaa cgacgatctg aatttccttg tcttaataca ggattaaccg
     7681 ctgaacctaa aactttttga tattttgttt taatttgcaa ttcttcatca ttttttggct
     7741 catctgggta atttggtaac atataaccct tatcttgcaa ttctttaatc gccgccttaa
     7801 gctgaggaat agaagctgaa atatttgggg ttttaataag atttgcatcc gatcttttga
     7861 caagctcgcc taaaagctct aaagcatctt cacatctttg ttcctctttt aaatactcac
     7921 taaaagtagc taaaatcctt ccagacaaag aaatatccga ggtttttact cctatatgtg
     7981 ccctacttaa aaaagctttc actataggca aaaacgaata agtcgcaaga gctggagact
     8041 catctgttaa ggtataagta atttgcattt ttagtccttt aaaatactta tttttatttt
     8101 catttttaag tatattacaa ataaaaaaaa atgcaagagt aagtttaaag tttgttttag
     8161 ttttcaaaca aactttaaat atttttaatt aagtaaatta gcaggaagtt gtatgatatt
     8221 tttaataaga ttaaaagggg tttttagggt atctgttaaa atttcggtat gaaatttagg
     8281 atcatctata cttccatcta tttttaagtt tgtgctaatt tcttgatttt tacctaaaat
     8341 tacataattt aaaattggaa ccttggatat agcttctgaa gctgatttta aagttttaag
     8401 ctctaaacta aaatccactg tatttaatct taaatttgct gatcctaaac catatatatc
     8461 tacactatcg ccatttaaat taatagctga aacacttaaa agatcttttt ttctattaaa
     8521 aataatcttt ccatcatgta agcttaaacc tttttgatta aaagttggag atttaaacat
     8581 caataaactt ggtacagtat caataaagga aataagctga tttatacctc ttaaatcctt
     8641 cacataagta tttttaaaat cgatctgtcc atcaaaatac tctaatccac ttccttttat
     8701 acttaagtta aacactccat ctcgaacagc ttgtttttgt aaaaactcat ttaaataatt
     8761 atcatcaata ttgctaacgt ttaaatttaa atcattagaa gaataataaa gatcaaattt
     8821 tgcatttcct ctagaacctt taagatccaa agcattacct tttaaatcag cctctaccct
     8881 atcaaaagcc aaagttttat tagaatctgg caaaattaaa gctacatttg ctccaccaaa
     8941 actaatattt tgggtattag tagaaatatc aaatgttgaa tttgaagagt tggaatcttt
     9001 tttataaata taacttaaat ttttcaaatg aatttcttta ttatcagaac ttattttagc
     9061 acttgctgta tcactttgag tatgaatttc cataatgccc ttatttttta caatatcaaa
     9121 gctatcattt tcataaggag tttgaccgtt gataagtaaa ttatttttaa aataagcatc
     9181 attaacactt gcattgaaat cttcaaaatt taaagtttta taataaacat ttttagcatc
     9241 aataaaccca aactttttaa gtaatggaga aaatgaaaat aaaatcttag gattattaag
     9301 attagcctca agtccatctt taaaatttaa aatcaaattc cactgaggaa tgctaatgtt
     9361 aacattttgc gaataatcta attttacttc tacattttga ttttttaaat ctaaaagctc
     9421 cccattgtca aaataaagcc ttgaaatctg agtattgaaa tttccttgtt gtttttgcaa
     9481 gtcaaattta gcattaaaat cagcctctaa aaagctattt ttaacactag cattttctat
     9541 atttaaatca ttttgattta attttacaaa tgcttttgta atattaaaat cagccaaaga
     9601 aatactagca ttctctaaag ctaaaatacc actataagaa atttcaccct tatcatgaaa
     9661 atcaatttta agctctaaat cacttttaat ttttccgctt ttttgataaa aaggtaatga
     9721 aaaatgataa tcctctaaag ctttagcaag tttttcgtca aattttagat tatcagactt
     9781 aatgcgcaaa taaatcccag cttttttttc atcaaacaaa tcatatagat aaaccttact
     9841 agaacttaaa tcagcaccat tatagaaagc tttattaaag acaaaatcaa gcttttgttt
     9901 gtttaaattt aaatcgagtt ttggaatttc aatagcattc attttatcat ccaaacgaac
     9961 tttgacatta ttaacataac ctgatgcact aatattgtct aaataataat tatctttagc
    10021 aaaatctata aaaccttgca aataatctaa atgataaaat tctcccttag ccctatatgc
    10081 tacccaaaga tttaaactct gcggaagttc tattctttta ttaactcttt taaaaatttc
    10141 cataatattt ctaatgttta aatcttctat tttataagct aaatttttat ctttgtaaga
    10201 gatacttgcg ttaaagtcaa gcaattctcc acttgctcta ccttgaaaat aataaaactc
    10261 actcttagta ttgatactta aatttccatc aatatttaaa tcataatctt ttaataaaag
    10321 ttttttaata tcagctataa gttctttatt ttgacgctgt aatgttaatt ttaaaaataa
    10381 taaatcatta tctataaaaa attcattatc tttaaataaa atacgcacat gattatcttt
    10441 tatatttaaa ttttgtatat caatctcttc aacaaaagta tatagatatt ttaaattttt
    10501 tgttattttt aaaatctctg ttgaagcatt atcagaagag tgagtttgtg atgaaatttc
    10561 ggaattttga gtctcattta tagtgatatt ttttgctcgt acaatta
//
LOCUS       DARBAC010000058        10434 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.058, whole genome shotgun sequence.
ACCESSION   DARBAC010000058 DARBAC010000000
VERSION     DARBAC010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10434
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.058"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            35..643
                     /gene="plsY"
                     /locus_tag="SB799_001106"
     CDS             35..643
                     /gene="plsY"
                     /locus_tag="SB799_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEG0868345.1"
                     /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLILKFLHYDQALLWSVAVLAIFGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVISS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            628..945
                     /locus_tag="SB799_001107"
     CDS             628..945
                     /locus_tag="SB799_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEG0868346.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLK
                     KKY"
     gene            1024..1695
                     /gene="hsrA"
                     /locus_tag="SB799_001108"
     CDS             1024..1695
                     /gene="hsrA"
                     /locus_tag="SB799_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HEG0868347.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVKKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1808..2053
                     /locus_tag="SB799_001109"
     CDS             1808..2053
                     /locus_tag="SB799_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEG0868348.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            2053..3513
                     /locus_tag="SB799_001110"
     CDS             2053..3513
                     /locus_tag="SB799_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEG0868349.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFCNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3510..4307)
                     /locus_tag="SB799_001111"
     CDS             complement(3510..4307)
                     /locus_tag="SB799_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868350.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTANNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVVFDHANKRYTMIIGNSNV
                     LLESVEIPEEQIIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4308..4616)
                     /gene="fliN"
                     /locus_tag="SB799_001112"
     CDS             complement(4308..4616)
                     /gene="fliN"
                     /locus_tag="SB799_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEG0868351.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4616..5038)
                     /locus_tag="SB799_001113"
     CDS             complement(4616..5038)
                     /locus_tag="SB799_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HEG0868352.1"
                     /translation="MLKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEG
                     ECNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDE
                     YKLGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
     gene            complement(5109..5858)
                     /locus_tag="SB799_001114"
     CDS             complement(5109..5858)
                     /locus_tag="SB799_001114"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEG0868353.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIFKK"
     gene            complement(5851..7029)
                     /gene="trpB"
                     /locus_tag="SB799_001115"
     CDS             complement(5851..7029)
                     /gene="trpB"
                     /locus_tag="SB799_001115"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEG0868354.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELEGAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            complement(7026..7625)
                     /locus_tag="SB799_001116"
     CDS             complement(7026..7625)
                     /locus_tag="SB799_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEG0868355.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGFIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQNVFVW
                     QVISVENSLDLKSEIFANLVLFDAKGILKGGNGISFDWTLLGSYTKDFILAGGIGLDN
                     VHKAVQTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            complement(7612..9213)
                     /gene="trpD"
                     /locus_tag="SB799_001117"
     CDS             complement(7612..9213)
                     /gene="trpD"
                     /locus_tag="SB799_001117"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEG0868356.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDEISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCRENELFSNLPLNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKSQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQVAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALSITTPNTLESVL
                     KQLNNQGLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYDNAKDLKDILSGRMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DMILEAIYSGKVIEYFKEYQAYAKA"
     gene            complement(9210..>10434)
                     /locus_tag="SB799_001118"
     CDS             complement(9210..>10434)
                     /locus_tag="SB799_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEG0868357.1"
                     /translation="YRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSFSEFKAKYY
                     EALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAYLIYEKNSK
                     MFFKFGASKYFEYLKDDIEPIKTKQKNDFEILNSLEDEKNDFLKMCEKAKEYLLSGDI
                     FQVVLSKQLCIKHQVNAFDYYESLSTLNPSAYMFYFPSKYGVVLGSSPEFLLKIKKRE
                     IYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGTQTRVENL
                     FSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEIISELEDCD
                     RGVYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYAEICAKR
                     RALLVAFENLKKENQ"
BASE COUNT         3685 a         1809 c         1276 g         3664 t
ORIGIN      
        1 tcttaaaatt ttaagatgat ttgaaaagga tattatggaa aatttaataa tttacgcttt
       61 tatatatctt ttaggttcaa tcccttttgg gctaatccta gctaaatttt ttgctaaaac
      121 tgatatcaaa aaagaaggtt caaaaagtat aggagcaacc aatgttttaa gagtagtaaa
      181 agaaaaaaat cccaaactag caaaaaaact tgccattgct acaataattt tagattttgc
      241 aaaagcagct attcctttac taatcttgaa atttcttcat tatgatcaag ctttgctttg
      301 gagcgtcgca gttttggcta tttttggaca ctgtttttca atttacttgt tatttgaagg
      361 agggaaaggc atagcaacag gagcaggcgc tatgatagtt ttacttccat tggaagtgct
      421 tacagcattt attgtgtggg tagttattgg aaaaattttt aaaatatctt cgctagcttc
      481 tttagcagcg ttacttgctt ttgttataag ttcttttata tttaattatg acttagaaat
      541 tcatacacat gcacccgttt tcattatcgc ttttattata gtatataaac atctacctaa
      601 tattaaaaga ttgattttta aagaagaatg caaagtcata taaaaataaa atttcacttt
      661 aagtgtatca ttggtatatt agatttcgaa agaagaaaaa aacaaaaaat tattatcaag
      721 cttaaagcta aagcaaatga atttttaaat tatgcagagg taattaccaa aattaaaaca
      781 tggtataaaa aagaagaatt ttacaccctt gaagagtctt tagactttgt aagcttaaat
      841 ttaaaaaaag attttcctaa tttaaccaat cttaacataa aaattttcaa accccatata
      901 ataaaaaatg ctacagttgg ggttaaattg aaaaaaaaat attaattttt ttttaaagat
      961 atctaaacat ttacttaagc tatgatataa ttctttaaat ttttcttaat aaggatagaa
     1021 caaatgagaa ttttagttat agaagatgag attagcctaa ataaaacaat tatagacaat
     1081 cttaatgaat ttggttatca aactgattct tctgaaaatt ttaaagatgg agaatacttt
     1141 atcggcatta gacattatga tttagtttta gcaaactgga ctttacctga tggagatgga
     1201 gcggaacttg ttaacactat taagcataaa tctccaagaa cttcggttat gattatgtct
     1261 tcaaaaacag acaaagaaac agaaatcaaa gctttgaaag ctggagctga tgattttgtt
     1321 aaaaaacctt tagattttga tattctactc gcaagaattg aagcaagact aagacttggc
     1381 ggaaccaatg ttattaaaat tgaagactta gttattgatc cagatgagga aaaaattact
     1441 tataaaggtc aagatataga acttaaagga aaaccttttg aagttttaac gcacttagca
     1501 agacattcgg atcaaattgt atccaaagaa caacttttag atgccatctg ggaagaacct
     1561 gagctagtaa ctccaaatgt tatcgaagta gctatcaatc aaattcgtca aaaaatggat
     1621 aaaccattaa atatatctac catagaaaca gttcgtcgta gaggataccg tttctgcttc
     1681 cctaaaaaat cttaacaatt ttgcaccttc ggtgcaaaaa atttatcttt atttctattt
     1741 ttatatttta tttaagtttg gttattgtat aaactaaaat tattttttaa atttttgaaa
     1801 ggttatgatg tctcttttaa ttacaaaaga ctgcgtatgt tgtgatgctt gcagagaaga
     1861 atgtcctgat gaagctattt atgaaaatag tccaatttat gtaatagacc ctgatctttg
     1921 ttcagagtgc gttaatgatt tttcagagcc tgcctgtatt gttgcttgcc catatgaatg
     1981 tatcattcct gatcctgata atgtagaaac tatagaagaa ttaaaactca aacatagaga
     2041 tagagaattt taatggcaaa aaaaacagcc gttgttgatc ttggctcaaa ctccattaga
     2101 atggtgattt ttgaaaaaac ttctagatat ggtttttata caacttgcga atacaaacgc
     2161 aaagtaagac ttggagaaaa tgcttataat aatggcaaaa ttctccaaga agaagccatg
     2221 caaagagccg aagatgcctt agcttttttc aaacaatgcg ctttaaagca taagtgcaaa
     2281 aaaatattta tagtaggcac atcagcctta agagatgccc caaattcaaa aaatttcatt
     2341 aaaagaatca aagataatct gtctttaaat atacgctgta tagatggaaa aagcgaaagt
     2401 tacttaggtg gtcttgcagc tctaaattta ttaagtcctt ttaaagatgg aaccacttta
     2461 gacataggtg gtggttctag tgaattgtgt ttaataaaaa ataatagaat tatttcttgc
     2521 atatctcttg atattggcac tgttaggcta aaagaattgt tctatgatac tggaaaaatg
     2581 gattctttag aagaatttat aaaaccaatt ttagaacaaa ttcctaaaga attttgcaat
     2641 caaaacctta ttgcaatagg tggaagctta agagcaatat ctaattccat catgcaaaaa
     2701 aattcctatc cactgaaaaa tttacatgat tttcgctata tgctagatga agaaaaaggg
     2761 catattttaa aaatttttaa ttcaaactta gactctttaa tcaattttgg cataaaaaag
     2821 gatcgttttg ataccattaa agagggtata tttatttttt taaagattgc ggaaaaaata
     2881 aaagccaaac aagttatcac gagtggggtt ggaatcagag aaggagttta tttgcaagat
     2941 ttacttcgtc ctaaaatcac ttttccacca aattttaatc ctagtttaaa atgtttacaa
     3001 gataaatttt tacaatcaaa acaaaaaaat aaaactccac attttgctct gcaaattttt
     3061 acaaccctta aaaatcttca taaacttaac gataactata agcatacttt actaaatgct
     3121 gctaaattat gccatattgg agaatattta aatttctatt ttgctaatga acactctgct
     3181 cattttgtac taggtggatt aaattatgga ttttcacata aagaaaaagc tttaattgct
     3241 agcattatta agcttaatgg aaaaaaagtt aacccttata atcttgaacc ctataaacaa
     3301 cttttaccca atattcatac catttcatgg cttaatttta ttttgtgcct agctaaaact
     3361 ttaagcacaa atgaagataa gattgatttt gcttttgcaa acaatactct ttatatatat
     3421 caagaaaaca aaattcttaa tttacccaaa gatgagctca aaaaaattgc aaaaccagct
     3481 accatagcat tagcaatcaa tcaaaaaatt taagattttt tacctttttg acgctgctct
     3541 ataagatttt gaattctttt tttattctct tcaaaaaaag aatcaaaatt tttctctgtt
     3601 ttttctgtat gttttattat ttgttcctct ggaatttcaa cactttctaa aagcacattg
     3661 gaattaccta ttatcattgt ataacgttta ttagcgtgat caaaaacaac aagttgatta
     3721 tttttatcta aaaatctttg gaaaatcata gtaaaatctc tagaaacatt gttattttta
     3781 taaaccatag tctttttaaa ccaccaaagc actattaaca aaataactaa aatcagcatt
     3841 actaagatat aatttgtata atcataccct tctaaacttg tactttttgg tttaggcatt
     3901 aattcttgag aattattcgc agtagttgta ggtacagatt cgatatttgc ttttccttgc
     3961 tctatagctc gtatccttac tccaaattta tcattgatag agctaagttc taaattaata
     4021 ttttgtttgt tttgtagcat aatataggta ttattatttt tagaactaat actaatttta
     4081 tctacaagtt gagagttaag ttcttttaat tcatctttag aatacgttaa atcactaaaa
     4141 gttaaaagag ttaaattttt ttcttttttt tgagaaatct tgccattata ggcattatca
     4201 aaagaaagca ttaaatctac tcgatcattt ctatcgtaga tattaaaact aatcagctca
     4261 acactatata aaggtaaaat taaaaaaaat aatactagca atctcattta aatttctttt
     4321 ttaaagtatt gaagcacagt cttagaatcc aaaatttcat taattcttat agcgagattt
     4381 ttttcataaa ccataacctc gcctttgcca aaaattcttt tattgatata aagctcaacg
     4441 ctttctccag caggcttttc aagatcaata accgaaccta cttcaagttt taaaagctcc
     4501 gctacactca tatttgtagt tccaagctcg cttacaaaat ctactgtaat atctaagata
     4561 tcttcataag attgtaaaag cccatgatga atgttaaact ctatatcatc gctcattatt
     4621 tgcaatatcc tattctaaaa taacaatttt caaatttata agttaaagct tcatctagaa
     4681 ctatttcaga aaaatcaact tttcctaaat attccggaat tccgagttta tactcgtcat
     4741 cacccttggc atcatttaac aaatttttag cataacctat aatctgattg gcacattctt
     4801 tagttaaatc gcaccagtca tcttctttaa atttttcatc attaattaaa atttctgcaa
     4861 ttttttttaa aaattctttt ggaaaaaata aataaaaatt acattctcct tcgcttttgc
     4921 ccatgatagg aatactcgct ccataaagtt caccgcttat atcttgagct gcttcaatgc
     4981 gaagtcttaa gatatgctcg caaaaatgag tgatggaata ctcaagaatc tttaacatag
     5041 ctaccacctt tataaaaaac ttaatttaaa attatagtaa atataaaata aaaatatgtt
     5101 ttaaaatttt attttttgaa aatttcttca atatctttca ttattatatc caaatttcct
     5161 tgtttaaaac actttactat gctagttccc acaatcactc catcagcaac ttttctcatt
     5221 ctttttacat cttgattatt ttgaatgcca aagcctacaa aaataggcaa atttgtaaaa
     5281 gatctgattt cttttacttt atcttgtaag attgcttctt cgacactttt cgtacctgta
     5341 atacctatgc ttgctaataa ataaataaaa cctttagcat gttttactaa ctttttaacc
     5401 ctttctttag gggttgtaac acttacaagt gtaattaaag ctatattata tctttcacac
     5461 tctttaatta aatcatcact ttcttcaaaa ctcaattcag gcacaatcaa agcacaaatc
     5521 cctaaagatt ttgctttttt cacaaatttt tccaagccat aagaaaaaat taaattataa
     5581 taaaccataa aaaccaaagc ttttttagtt tttatcctag ctaaaagctc aaaaacacta
     5641 tgaatatcca cgccttgatc aagagctatt tttgccgcat ctgcaataat ctcaccatcg
     5701 gcaataggat cactataagc aacaccaagt tctaaaatat caatagggct ttgatccaat
     5761 ctttgcaaaa aagcttcact tgtttgaaga tttggataac ctaaaaccgt ataagccaca
     5821 tttgcatttt ctttataaaa ttttctaaaa tcaaccataa atcacccctt ttttataatc
     5881 tctaatcatt tgcatatctt tatctcccct gcctgaaaga tttactacta tcacgctttt
     5941 cttttttaaa gttggacaaa gtttttctaa aaatgccaaa gcatgcgaac tttcaatcgc
     6001 tgcaataata ccttcttctt tacaaagtaa ttttaaagcc tgcatacatt cttcatcact
     6061 tatagcatga tattgcgctc ttttgctttc aaataaaaaa gcatgcaaag gaccaattcc
     6121 tggataatca agccctgcag aaacactatg tacaggcaag atattgccta aatcatcttg
     6181 taaaaccttg gttttcatac cgtgaataat gcctgttttt cccttattta aagtcgctgc
     6241 atgataaggc gtatcaatgc caagcccccc tgcttcaata cctataagtt taacattttc
     6301 atctttgata aaatcataaa aaatcccagc tgcattgctt ccacccccaa cagctgcgat
     6361 aatataatct acttttttat tgagtttttg aagttgcatt ttgcattctt ttcctataat
     6421 actttgaaaa tgcattacca ttttaggata aggataagga cctaccgcac ttccaaccac
     6481 ataaaaaata tttttaatat ctccaaccca agcttgaata gccgcagtag tagcttcttt
     6541 tagagtttta agcccacttt gtactgcatg aattttagca cccaaaagct ccattttata
     6601 aacatttaaa gcctgtcttt gcacatcggt tgcccccata taaatttcac attcaagtcc
     6661 taaaagtgct gctgcagtgg ctgttgcaag cccgtgttga cctgctcctg tttctgctat
     6721 gatttttttc tttcccattt tttttgctaa aagggcttga gcgatggcat tattgatttt
     6781 atgtgctccg gtatgattta aatcctcgcg ttttaaataa atttcatgct gatatttttt
     6841 gcttaaattt ctagcaaaat aaagtggagt aggacgccct acataagttt ttaaaagctc
     6901 gtttaattct tttttaaaga gtttatcttt agaaaatttc aaaaaagcac cttctagctc
     6961 atttaaagca aacattgcac tttcaggcaa aaactgccca ccaaaatccc cataatacgc
     7021 ttttttcatt ttttcaactc ctttaaaatt tgttttattt tgttgatatc ttttaagcct
     7081 ttttcatctt caagttttga attaagatct aaaattttag ctcccgtttg tacagcctta
     7141 tgaacattat ccaaacctat gcctccagct aatataaaat ctttagtata agaacctaat
     7201 aaagtccaat caaaacttat tccattaccg ccctttaaaa ttcccttagc atcaaaaagt
     7261 actaaattag caaaaatttc actttttaaa tctaaactat tttccacgct aatcacctgc
     7321 caaacaaaaa cattttgcac ctttaaaatt tcaaattctt ctttggtaat agtgcgataa
     7381 atttgtatcc catcaagctt agcttcttta atacatctta aaatttgttc caaattttca
     7441 tctacaaaaa caccgacaac ttttttatct ttttcatgaa aaattgcact taaatttctt
     7501 gcttgttcta aactcactct tcttggactt ttagcaaaaa taaatccaaa aaaatcaata
     7561 tttaaaaaag ctaaatcttt ggcatttttt tcatctttaa taccacaaat tttaagcttt
     7621 agcataagct tgatactcct taaaatattc tataacctta cctgaataaa tggcttctaa
     7681 aatcatatct ttagccacta aaggcgaact tgctttattg gctgtataaa gtgcaaacat
     7741 agcatttaaa actaccaaat caaattttgc cccttgcatt ctaccgctta aaatatcttt
     7801 taaatcttta gcgttgtcat atgcactaga tcctatgatt tcactatgaa aagctctttt
     7861 aaaaccaaat tgttcaggac agatagaata ctctaaaatt tctccttcac aaagctcata
     7921 aattttactt tcatcgcaaa tactaagctc atccatacca tcatttcctc ttaccactaa
     7981 agcttttttg cgtcctaaat tttttaaaac ctctatcaaa agcctatgca caggtgcgtg
     8041 ataatttccc ataagttgat attttaactt taaattaggg tgcaataaag gacctaaaac
     8101 attaaaaacc gttcttactc caagtcttga tctgatctct ttaagttctc ctactaaagg
     8161 atgaaaaaat ggagcatgta aaaaactaag cccttgatta tttagttgtt ttaaaactga
     8221 ttctaaagta tttggagtag ttatacttaa agcttctaac acatctgtac ttccactaga
     8281 acttgaaatg gcacgatttc cgtgtttggc tacttttact cctaaagctg ctaaaataaa
     8341 agcactagtc gtagaaacat tgatactttt aaaaccatct ccacccgttc cacaaatatc
     8401 aatcatctca ctctcatcac taaaagtttg agaatatctt aaaatttgtc ttacaaaagc
     8461 acttaaagat ttttcgttta aagacttttc agtgattaaa atcaacaaag ccgccacttg
     8521 caaaatttca taatctttag acataataat cttacaaatt tgctcaaaat catcgctttg
     8581 taaaaaatga ttttcactca ttttttgcaa ataaaaactt aaaggatttt cttgtttttg
     8641 tgattttttt atatcttgtt ttaaaaaatt agaaaaaagt tgtaagccat attcactaaa
     8701 atagctttca ggatgaaatt gcacaccata ataaggtaaa tttttatgtc ccaaagccat
     8761 aatcacaccc ttttcatcaa gggctaaaat ttcaagctca tcactaagct gtttaacctc
     8821 taaagaatga taacgcatca cgctaaaatt taaaggtaaa ttagaaaata attcattttc
     8881 cctgcactgt tttatcaaag aattttttgc atgcataggc tcttgcatct taaccactaa
     8941 agaatcaaaa gctaaagcta aagcttgatg tcctaagcaa atgcccaaaa cagggatatt
     9001 aagccttgct ttaaaaattt caagacaaat cccactttga cttggatgct ttggaccagg
     9061 acttaaaata atatgagtag gatttaaatt tttaatttca ctcagagaaa tttcatcatt
     9121 tcttcttact aaaatttcat cattgctgag ttgctctaac atgcttttaa cattaaaaac
     9181 aaaagaatca taattatcaa ttaaaagtat cattgatttt ccttttttaa attttcaaaa
     9241 gctaccaaaa gcgccctacg tttagcacaa atttctgcat attctttttg actctcactt
     9301 tgcaaaacaa tacccgcccc acttgccaaa taagccttat cttgagtaaa aaaagcgcaa
     9361 cgaattaaaa tcgctaaagt tatgtcttcg ttaaaattta aaaatcctac cgcaccacca
     9421 taaactccac gatcgcaatc ctcaagctca ctaatgatct ctaaagctct tattttagga
     9481 gctccgctta aagttcccgc tggaaaaact gcctcaatca catcgaaaat actcgcatct
     9541 tctttcatat tggcatacac ttcactcact atgtgcatta caaatttatt tttaataata
     9601 gaaaaaagat tttccactct tgtttgagtg ccaaatttag aagcatcatt tcttgctaaa
     9661 tctacaagca tcttatgttc actaagttct ttttcatcac ttaaaagatc tttttctaaa
     9721 gctaaaagat cacagttatt ttccaaattt ctagttcctg caataggggc taaataaatc
     9781 tctctttttt taatttttaa taaaaactct ggagaagaac ccaaaacaac accatatttg
     9841 cttggaaaat aaaacatata agcacttgga tttaaagtac ttaaactctc ataatagtca
     9901 aaagcattta cttgatgctt gatgcaaagt tgcttactta agaccacttg aaaaatatct
     9961 ccacttaaaa gatattcttt agctttttca cacattttta aaaaatcatt tttctcatct
    10021 tctaaagagt ttaaaatttc aaaatcattt ttttgtttcg tttttattgg ctcaatatca
    10081 tcttttaaat attcaaaata ttttgaagcg ccaaatttaa aaaacatttt gctatttttc
    10141 tcataaatca aataagcttt agcattggca aataaaaata aaggaaaatc ataatttttc
    10201 ttagaagaaa gtggaatttt ttcaaacaaa gatacaaaat tcgcactaaa aactccaaaa
    10261 aatccagcaa agtcacaaat tttattcttg cttaaagctt cataatattt tgccttaaac
    10321 tcgctaaatg ataattcatt agcatctaaa taatcacaat caatccctat aattacctta
    10381 gtcaaatcct ctgcaaaata agaattttca aatttttcaa ggatttgtct gtaa
//
LOCUS       DARBAC010000059        10416 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.059, whole genome shotgun sequence.
ACCESSION   DARBAC010000059 DARBAC010000000
VERSION     DARBAC010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10416
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.059"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            8..1282
                     /locus_tag="SB799_001119"
     CDS             8..1282
                     /locus_tag="SB799_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEG0868358.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEISKILPTY
                     ANTHSDSSLNSFKTQQTYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDSIGIKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIVKLSH"
     gene            complement(1279..2103)
                     /gene="purU"
                     /locus_tag="SB799_001120"
     CDS             complement(1279..2103)
                     /gene="purU"
                     /locus_tag="SB799_001120"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HEG0868359.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVLPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIHNNKTIIF"
     gene            complement(2100..3218)
                     /locus_tag="SB799_001121"
     CDS             complement(2100..3218)
                     /locus_tag="SB799_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEG0868360.1"
                     /translation="MQISKISLKNNSDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKLKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGAGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELYKFFKSPRLDVGYRYLQ
                     ELGLEKQVFGFESVFKSLEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     KKEYLKYANQAFYLDDISDFELAKIAFEMPLKEWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLVK"
     gene            complement(3187..3678)
                     /locus_tag="SB799_001122"
     CDS             complement(3187..3678)
                     /locus_tag="SB799_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HEG0868361.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQSEILNP
                     SVITEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(3675..3923)
                     /locus_tag="SB799_001123"
     CDS             complement(3675..3923)
                     /locus_tag="SB799_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEG0868362.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPDNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(4002..4175)
                     /gene="tatA2"
                     /locus_tag="SB799_001124"
     CDS             complement(4002..4175)
                     /gene="tatA2"
                     /locus_tag="SB799_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HEG0868363.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKAQVKKEQKELNSSLEK
                     EKKEYIEKLFKTK"
     gene            complement(4185..4523)
                     /locus_tag="SB799_001125"
     CDS             complement(4185..4523)
                     /locus_tag="SB799_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HEG0868364.1"
                     /translation="MNNLSSVLILVKEEYINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENIR
                     YYGSVFNQFS"
     gene            complement(4516..5430)
                     /locus_tag="SB799_001126"
     CDS             complement(4516..5430)
                     /locus_tag="SB799_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEG0868365.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDVFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLVAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPNGELAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIISGFGDSIMFRSIDE"
     gene            complement(5435..5959)
                     /locus_tag="SB799_001127"
     CDS             complement(5435..5959)
                     /locus_tag="SB799_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HEG0868366.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(5956..6738)
                     /gene="napH"
                     /locus_tag="SB799_001128"
     CDS             complement(5956..6738)
                     /gene="napH"
                     /locus_tag="SB799_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HEG0868367.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRFFNTIPLS
                     DPFAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(6735..7475)
                     /gene="napG"
                     /locus_tag="SB799_001129"
     CDS             complement(6735..7475)
                     /gene="napG"
                     /locus_tag="SB799_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HEG0868368.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLALKADDNYALRPPGAED
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFDAKKATNYLNDGEL"
     gene            complement(7493..10267)
                     /gene="napA"
                     /locus_tag="SB799_001130"
     CDS             complement(7493..10267)
                     /gene="napA"
                     /locus_tag="SB799_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HEG0868369.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFDEFKKGLAPYTLEYTARVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
BASE COUNT         3506 a         1972 c         1281 g         3657 t
ORIGIN      
        1 ataaggattg tatttgcaaa tttcagattt aaaaaaagaa ttgatcttaa aaaaaggtat
       61 tttgcatttt gacttcacag caagtgcttt agctctaaaa tgcgtagaaa aagaaatttc
      121 aaaaattctc ccaacctatg caaatacaca ttctgatagc tctttaaatt cttttaaaac
      181 tcaacaaact tacgaacaag caagaaaaga tataaaaaaa agtttatcat tagatgaaaa
      241 ttttgccctt atagcttgcg gaacaggatc aagcagtgct attaaaaaat ttcaagaatt
      301 gatcggcatt tacattcccc ctcttgtaaa agaaagatat tttacgcaaa tcgataaaaa
      361 taccttacct ttagttatcg tagggcctta tgagcatcat tctaatgaac tttcatttcg
      421 agaaggctta tgtgaatgta ttagaattcc cttagataaa aatggagaaa ttgattttga
      481 ttttctagaa aaaactttac aaaaaaataa aaaaagaaaa ataatcgcta gcttttcttt
      541 agcttcaaat gttactggga tattaagtga ttacaaacgc atttctgaaa tggttcgtaa
      601 atttaaaggg atagttgctt ttgatgcatc tagtttcatt ccctataaaa acatatcttg
      661 tcaatactat gatgcgttgt ttataagttc tcataaatta atcggtggta ttggcggttc
      721 tggactttta gccatcaaaa aagatctttg tggaaacaag cctagctttg cagcaggtgg
      781 aactgtgggc tatgtttctc gcacttcaca atgctacctt tgtaatgaag aagctttaga
      841 agaaggagga acacctggaa ttttacaact cattcgcgct agcttagctt ttaaaatcaa
      901 agattctata gggattaaaa atatagaaaa aaaagaagaa attttaaaag attatttttt
      961 tgaaaaacta aaaactatac ctaatttaat tttatatgca aagaatttaa aaacccgatt
     1021 gcctattttt gctttcaata tcaaaggaat ttctcctttt gatatcgctt acgaacttag
     1081 taaaaaatac cacatagaaa cacgcgctgg atgtgcttgc gctgggcctt atggtcatga
     1141 tttgctaggc ttaaaagaca atcaaaaact taaaacaaaa ccaggttggt taagaataag
     1201 cttgcattat acacatgaaa aagaggatat tgattatttt tttaatgctt taaataaaac
     1261 tatagtaaaa ttatcgcatt aaaatattat agttttatta ttatgtataa aaattctatc
     1321 ttcaaaagcc aaatcaagtg cttttgaaag aacatctttt tctatatttc tacctgcttg
     1381 ttgcatatct tgccaagtaa attcatggtt tacaggtaaa acagcttgag tgataatagg
     1441 accttcatca agattattat ttacaaaatg tgccgtagct ccaattattt taacccctct
     1501 ttcaaaggct tgtttataag gatttgctcc tataaatgca ggtaagaaag aatggtgaat
     1561 atttataatc ttaccttcaa aatgcctaac aaaatcagga gataaaattc gcatatattt
     1621 tgccaaaacc aaataatcaa atttatattg ttcaagacat tttaaaatct gattttcttg
     1681 ctcttttcga tctaaatttt cagcgctgat aaaatgataa ggaatttcaa atttctcaac
     1741 taaatccttt aaagagttgt gatttgaaat cacagctttg atatttgctt caagttcgtt
     1801 actataatgc tttattagca aatctcccaa acaatgactt tctttagtag caaaaacaac
     1861 aatatctttt tttctcttct cgcaaagctc tatcaaggct tcttgtccaa gcatagcctc
     1921 aagcgttcct ataaaagctt ctttatcaaa ctcaccttct aaaagagcac gaaaaaaaaa
     1981 cattccttcg cctacaaatt catcgttttt tactatattg atatgatatt taaaaataac
     2041 atcagaaatt ctataaatta aacctttttg atctttggtg caaattttta atacagaaat
     2101 catttaacta aaccttttat atattctttt aattcattct ctcttgcttc ttgaagcttt
     2161 agaccaagaa ttttaccaca aaatccagca tttatgaaat cttttgctaa aattttactt
     2221 tcaaacttat tctcataaag ccctaatctt ttagcttgct caatacgctt tttactccaa
     2281 agtccaagcc attccttcaa tggcatttca aaagcaattt ttgctagttc aaaatcactt
     2341 atatcatcaa gataaaaagc ttgatttgcg tattttaggt attctttttt aagtttagtt
     2401 cttttaaaaa atatatcttt ttctaaatta aaaaaattca aatacaaata caagaataaa
     2461 gcatcgcttt ttacaaattc tctactttgt ctgagtaaat tttgaaattc caaactctta
     2521 aaaacactct caaagccgaa aacctgtttc tctaagccaa gttcttgtaa atatctatag
     2581 ccgacatcaa gtctaggact tttaaagaat ttataaagct ccgcattgat cctatcttta
     2641 ctaagatcag ttatatccat actttgcatc aatttcaagc tttcactagt tatcttaaag
     2701 ttaaaccttg aggcaaatac tactgctctt aataccctta aactatcctc ttgaaagctt
     2761 tgtttgtcaa tatgccttaa aaagcctgct cctagatctt ttaatcctcc gtaaaaatct
     2821 aaaaactcat cgttaaaaag attaatcatc atagaattta tggtaaaatc gcgtcttttg
     2881 gcgccaagtt tttcatcatt gcaaatttga acttcaaaac ctttatgtcc atagcttatt
     2941 ttgttttcgg ttctagcaag agctaaatca taatttttaa acttatacac aaaaaaactt
     3001 tttccaaagc cttgtgcgcc caatttttgc ataatctttt caaaatcttt aagttttata
     3061 tcataaagct ctatatcata gtcacaaatt tttaaaccta aaaacaaatc cctaacacta
     3121 cctccaacca aatacgctcg tttggtataa ggctttaaaa actcagcaat aaactgtaaa
     3181 tcggaattat tttttaagct tatcttcgat atttgcaagt aaaaactcta aaaaatttat
     3241 ggtcaagttt aacctatttt caagatcatc tttttttata ctatttaaac cttcaaaaag
     3301 aactaaaatt ctctctctaa gatgttttaa aaaaatatcc tcattaagcg tttgaacctc
     3361 tgttataaca ctaggattta aaatttcact ttgtaaaaaa ggctcttctt ttttaaactc
     3421 tttattttcc tgagtagaaa tttcaatatt attttgtatt ttttgctctt cttcaaattt
     3481 tgccatagaa attttatctt ctaagtcttg cggagtatcg agctcttcgc atacaaactc
     3541 cataggcggt aattcatctt ttatttcagt ttttctattt aattcttgtt cttttaaaat
     3601 ttcattttgt cttctttgct cttccatgat agagctaact tcgctaatgg tttttttagc
     3661 taaatcttcc aaattcatat ttttatcaac caccttttaa attcattaat ttcttcatcg
     3721 cttttcatat taataaaaaa atccaacatt tgagtgttta aatctttatg cttggatcta
     3781 aaaccactaa gacgacgaac cgcatcgata gcgttttggt tatctggatc ttcttttaag
     3841 atatttttat aaatttctaa agcttcgtct tttaaccctt gagcctcata gatagaagct
     3901 tcagtgactg tatttttcat cactgtttcc taaaattttt ctttaattct agcaaaaagc
     3961 tttttaattt atctttaaga aaataagatg ttttttaatg tctattttgt tttaaacaat
     4021 ttttctatat attctttttt ttctttctct aagctagaat ttaattcttt ttgttctttt
     4081 ttaacttgcg cttttaaatc ttgattttta aaatacacat aatcaattcc aaaaataaca
     4141 ccaattataa taagcaatgg gattaaaaat accatcttta cactttaaga aaattgatta
     4201 aacacactac catagtagcg aatattctca gcattttcat ttttttctat cgtttctatt
     4261 gcgccactat tgattgcttt ttggatatca tcatttaaat cttgataaga aaaaaccata
     4321 ttaatactga taatatttgg caatttctca agcattttat aagagtttaa ctcatcttct
     4381 aaattttcac tttcaatcac aactataatc ttttcatttt cacaaagttc tacagaacaa
     4441 aaaggaattt cagatatagc cttttttaaa tcatttatat attcttcttt tactaaaatc
     4501 agaacactag aaagattatt catcaatact cctaaacatt atactatcac caaagcctga
     4561 aatgataaaa tctttattgt ttaaaaaaat aataaactca ctcatcaaat tttcattatt
     4621 aaaagtttta acaggcttaa aatcacttgt actaaaaact tcactaactc cagcttcatt
     4681 atcgctataa acagccaatt ctccattagg acttaaagcg caagtatata tcaaaaaatc
     4741 tttttgtaaa aaattttgct cttcattttt tacaactcct atacgcctat ccgttccaca
     4801 acttaaaata acattatttt taaaatctac ttgatagata ttatctttat gcattttatc
     4861 atagtttttt aacatcttcc aatttttcaa atcaaaaagt tctacttcgc cactctcaaa
     4921 acctgcaact agtctactct tatcttcatt taaaactgca tcattaagac tagaatggga
     4981 aaaattaaat ttttttatat tttttaaact tttatcaatc aattctattt cagaaccaat
     5041 agaaatcaaa agataagtat tttcattgat aaaaaatgct tttattatgc tattttcttc
     5101 gagctttttg atttgtaaat tttccttata aaaacttaaa tttttagcac caaaatcacc
     5161 ctcgctaagt attaaaagtg tatgtttaaa aacatcaatg ttgtaaattt tagcaaaatc
     5221 atcaccataa taatttttaa tctttggcaa agataaaagt tcttttaaac ttttatcttt
     5281 aatgttatat tgtaaaattt cacctttatc agtgcctata tataagtttt gcttatcaag
     5341 ctttaaagct gttatattgg catttaattt cagctcataa gcataagaca aaacacaaaa
     5401 aagactcaaa ataaaaagaa attttttcat ttatttactt tacaccctca ttaatcacat
     5461 caattaaatt tgaacgactt tttaattgtt catttttaaa ttcaggttta aagctatttc
     5521 ccactaaagg ttttgcatcg ctttgtggaa catgacactg agtacaatta aaacgactat
     5581 cgctaatcat atctcctgtg gttttattgt gtctaaaatc ataataatga ctagcaggaa
     5641 gtggagttgc accagcatct gctgctatag ccttatcatg gcagcttaag cacatattgt
     5701 tatctttagt tataggtaac aaatcttcaa tagcatgcgg aattaatggt ggtgcatttt
     5761 cataagaacg ctcaaaacga gtagattccc caggttgtaa agttgtgaaa tttgcttcca
     5821 ctaaatttac tttattttca ttttctaaac ttgcttttct aagtccaatt tgttccgaac
     5881 ttaccccact attcattgca caagcggcaa aaaataccac tgcagcactt cctaataaaa
     5941 ccaatttctt cttcatcatt tattccttaa atcaaaaata ttaaaattca aagcatcatc
     6001 attacaaact tctatacatc ttgcacacct tatacactct cctgatttca cgctagtact
     6061 ttcttttcca accatccaca aaacctgttt ttcaggacaa atacggatac attcataaca
     6121 tttagtgcat ttatcactat catgctttat tttaagcaaa gcaaaacgag aaataaaagc
     6181 ataaaaagct cctagtggac aaaaatgtga acaaattgcc ctagggctta aaaaagtatc
     6241 gatacaaaaa agtataaagg ctacaaaaat ccaagaactt gtagcaaaaa taatccctct
     6301 atgtatcatt cctatataag aaaaactttc aaacacaggc aatgaaaata caaaagaaag
     6361 gactaaaacc aagaccaaca caaaatagcg taaattttta ggtaaaatta aaaatttatt
     6421 attaagggtt aatttatttc gcacaaaagc agcaaaatct gtgattaaat taacaggaca
     6481 aacccaagag caaaaaaccc ttcctaaaag caaaccatag ataaaaaata taatcaaagc
     6541 tcctattaaa gccattaaat ctatactcca gcttgctaaa atgatttgca aaaccgcaaa
     6601 aggatcgctt aaaggtatgg tattaaaaaa tctagaagaa cttaaatttc cctgcaggat
     6661 aaaatctgta gctttaaaac taaaaagcgc taaaattcca agctgaacga tgcgtctagc
     6721 aattaaatac ttcatcacag ttctccatca tttaaataat tggttgcttt tttagcatca
     6781 aaatgttttg aagtatctgc attttttata cgtccttcat ctttttcatc ccagcctttt
     6841 acataatgag atcctgcttt tcccaataca tactcccttg gcaaaacacg aatggctggt
     6901 ttttcagtaa tacaagcaag ttcacaaagc ccacaaccta cacacacttc atgatccaca
     6961 ctaggtagta aaaaagcgtg cttggcggtg cgttcattgc gtttaagctc aagttttaaa
     7021 gccctatcta tcaaaggaca agctctataa caagcatcac attgaattcc ccagtgtgcc
     7081 acacaagaag cactatcaac aatagcaata cccattttca aagattctat accctgttct
     7141 aaatgctttt tatctaaagc atcagttgga cattctctaa tgcaaggaat atccttacaa
     7201 agataacaag gaatttctct tgccttaaaa aaaggtgtac cattttttgg actatctaac
     7261 aagctagcaa gctttaaagt atcataagga caggctttta cacaaagccc acaacgaata
     7321 catttgctta aaaatctagc ttcatcttca gccccaggag gacgcaaggc ataattatca
     7381 tcggctttta aagccaaatt agccaaaaat ccacctcctg tacataaaca tgcagcctta
     7441 aaggcactaa cgaaaaattc tcttctacct ttcatttaat caaaacccta aatcaagcct
     7501 tataaatttt tacagcacat tttttaaagt cagtttgttt tgaaagcgga caagtcgcat
     7561 ccaaagtaac tttattgata tatacattct catcaaacca cggcacatat acaagtccta
     7621 caggcggttt gtttcttcca cgcatatcta ctcttgcttt tactttacca cgacgagatt
     7681 ccacccaaac taaatcacct tgatttaagc ctaatttctc tccatctttc tcactcatat
     7741 agcaaagtgc ttcaggcaca gcacggtaaa gctcaggcac acgcatagtc atagttccac
     7801 tatgccaatg ctctaaaacc cttcctgttg caagccagaa tggatactct ttacttggtc
     7861 tttcaggtgc tttcataaat ggcctaaaga aaattttagc cttattttta atactgtgct
     7921 ctttttcatc tttaggagct attaaatccc catttgtaag cattttgtta aaatcaccat
     7981 aaaaagcaaa atctgaattt ggagccgctt ttttagcata ataatcaaat ttagtattaa
     8041 atctccactg tgtttccttg ccattaacca caggccatct taaacccctt actttatgat
     8101 aggtatcaaa atccgctaaa tcatgtccgt gtcctaagcc aaatttacga tattcttccc
     8161 aaaggtattt ttgaacgaaa aagccatagc ctgtaaattc ttttccatca ctgccttgaa
     8221 tttttctctc atcaccttta acatcggtat tatcaaagcc ttttgcgata gcatcgtttg
     8281 gattaaagct ttttgcttct ttattggcaa atagcacatc aaaaagtgta tcatcttcgc
     8341 tataacccat agcttttgcc tcttctaaaa cgcttggcaa ggtaagctta ttatccactt
     8401 tttgctcttt ccaaacttct ttaagcttaa agcgttttgc aaattctaaa atttgccaag
     8461 tatcactcat ggcagcacct acaggtaaga cttgttgttt ccaatgttga gttcttcttt
     8521 cagcattacc ataagcaccc catttttcat aaatcatagc gcttggtaaa ataagatcag
     8581 ctacttttgc tgaaattcca ggataacaat cacttacaac aataaaatta tccatttctc
     8641 ttgctgctgc aatccagtga tttgcatttg cagtgttttg ccatggatta ttcacttgca
     8701 cccatgcaaa tttaattttt ccatcttcta aatctctcat gatattaaga taaggagaac
     8761 ctggttttgg gttgatagtc tttgcaggaa ctttccaaat tttttcagaa atttctctgt
     8821 gttttggatt ggctacaacc atatctgcag gcaaacgatg tgagaaagtt cctacttccc
     8881 tagctgttcc acaggcactt ggctgtcctg ttaaagaaaa ggctccacta cctggtttag
     8941 cttgctttcc tagcaaaaaa tgtaccatat aagcttgttc atttacccaa gaacctcttg
     9001 tgtgttgatt aaagcccata gtccaaaaac ttacgacttt gcgatttttc tctatgtaaa
     9061 gattagctaa ttcttgaagt tttttcttaa aatcttccaa agactcatta tcatcacctt
     9121 tggctactct tgcagtgtat tctaaagtat aaggggctaa acctttttta aattcgtcaa
     9181 aagaaatttc ccagttttta tcagccacac cttgatgttt catttcaaat ttatcacccg
     9241 ctttaacgcc aagataagat aaagaagtag cctcttcatc gtctaaagtg attacatttt
     9301 ctttttcaac cgtatctttt tcactttctt taaattttgg atgatttgga ttatttctca
     9361 taccataacc aatatcagca taaccagttg caaatacgca gtgatctttg ataaatttca
     9421 tatccatagc ctctggatga ttataaacaa tctctcttgc tatgtagttc caaatagcca
     9481 aatctgtatt tggtttaaaa ataatttcaa tatcagcaat atttgaagta cggttagaaa
     9541 aagtgcttag attaacaact ttaaccttat caagattgct tagttttcta tcacttactc
     9601 ttgaccaaag gattgggtgc atttcagcca tattagctcc ccaagtgatg atagtatctg
     9661 taagttctat atcatcataa cagcctgatg gttcatctac accaaaagtt tgcataaaac
     9721 caaccactgc agaggccata caatgtcttg catttggatc gatattattt gttctaaagc
     9781 ccgcttttgc aagttttaaa gcagcataac cttcttggat ggtgtattgc ccactaccaa
     9841 aaatccctat acctgtaacg ccgagttcat tgtaggcttt tttaaattgt ttttccattt
     9901 catcaaaggc tctttgccaa gaaacttgtt gaaatttgcc ttttttatca aattcgcctt
     9961 tttcattcat gcgaagtaaa ggcataacaa gacgatcttc accatacatg atcttagcat
    10021 taaaataacc tttgatacaa ttaagtccgc gatttacggg tgctgcagga tcaccttttg
    10081 ttgctacgat tttgccatct tttctggcta tcataattcc acagccagtt ccacaaaatc
    10141 tacaaacagc tttatcccat ttccaatctt cttcttgtgc accaagcata gagcttggaa
    10201 cactaagtcc tgcaacacta gcagcacttg caatagcggt atttttaata aaatcccttc
    10261 tattcatcct tattcctcca aaataaaaaa atcatcttat tataaaaaat ggagtataaa
    10321 aatctcttga aattttaata aaaataataa ttttaaagct ctattttata ggagttttat
    10381 tgtccttttt atattattct tacacaaaat aaatat
//
LOCUS       DARBAC010000060        10402 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.060, whole genome shotgun sequence.
ACCESSION   DARBAC010000060 DARBAC010000000
VERSION     DARBAC010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10402
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.060"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..769)
                     /locus_tag="SB799_001131"
     CDS             complement(<1..769)
                     /locus_tag="SB799_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEG0868370.1"
                     /translation="MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKECLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYSKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDICGTLVFLLSDESRFITGQTLVVDDGWGL"
     gene            complement(769..1476)
                     /gene="legF"
                     /locus_tag="SB799_001132"
                     /gene_synonym="ptmB"
     CDS             complement(769..1476)
                     /gene="legF"
                     /locus_tag="SB799_001132"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HEG0868371.1"
                     /translation="MAEILCTICARGGSKGVKNKNIRKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASAAQKYGAEVFFKREAHLANDRTAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            complement(1469..2374)
                     /gene="ptmF"
                     /locus_tag="SB799_001133"
     CDS             complement(1469..2374)
                     /gene="ptmF"
                     /locus_tag="SB799_001133"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HEG0868372.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIY
                     RSLKECDLNEFDLFIIANITTEHFNTLKTLDELVKDKTILVEKPLFKKSQNFTSSKNH
                     IYVAYLLRFHPVIVALKRLLKGEKIYFASLICNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFKDLELIYSQNAKISELDITSDDFAFLALKNSQEAKIHIELDYF
                     SKFNKREIIIHTLEKSFKADLINNNIEIYHKNQSQKILNFENDTIKTLQNLHHAVFEK
                     DKELCDLKQALKVLEICDEVRKKNG"
     gene            complement(2371..3396)
                     /locus_tag="SB799_001134"
     CDS             complement(2371..3396)
                     /locus_tag="SB799_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEG0868373.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKISAKTDIYDFPVLNEKGQI
                     LSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELDFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLALQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            complement(3405..4559)
                     /gene="legG"
                     /locus_tag="SB799_001135"
     CDS             complement(3405..4559)
                     /gene="legG"
                     /locus_tag="SB799_001135"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEG0868374.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLSLQIMATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKTMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQA
                     FEKLESKEFKQNLKNFKNPYDNDKNPNKFIKTCLKNANLDTILHKNFIDL"
     gene            complement(4552..5556)
                     /gene="legI"
                     /locus_tag="SB799_001136"
     CDS             complement(4552..5556)
                     /gene="legI"
                     /locus_tag="SB799_001136"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HEG0868375.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAK
                     NCISTKAKKAPYQLKTTASDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEVEEALNVLCK
                     NGAKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTQGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIQKGEIFSEENLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            complement(5614..6735)
                     /locus_tag="SB799_001137"
     CDS             complement(5614..6735)
                     /locus_tag="SB799_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HEG0868376.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPNIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDAKETPSAKEIFLNGVASDLNINEFIDDEIKEENL
                     QLFFNPNANDINKLNPIYLSYFIKWNSYSNYIFAKSRGFTDLEGEWYRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLDNRCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNPLK"
     gene            complement(6852..7238)
                     /locus_tag="SB799_001138"
     CDS             complement(6852..7238)
                     /locus_tag="SB799_001138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868377.1"
                     /translation="MDDLNCDFIHFFNTIYIKLIKLCGSNLERFTPLKDLKKLGFHII
                     CSKGNRGALANLLLFNEISSFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIGIE
                     LCNKICKNLKEDDENFYHPKIFKKAL"
     gene            complement(7241..7558)
                     /locus_tag="SB799_001139"
     CDS             complement(7241..7558)
                     /locus_tag="SB799_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEG0868378.1"
                     /translation="MKEINIIDFGLMGKQISALFYLLGHEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNIVFRI
                     QVL"
     gene            complement(7578..8174)
                     /locus_tag="SB799_001140"
     CDS             complement(7578..8174)
                     /locus_tag="SB799_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HEG0868379.1"
                     /translation="MKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFFDLKYL
                     GNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKIGQ
                     GVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFL
                     ATRVSLLPCVNLEDNCIVSADSIISKTTHPINLFFIKI"
     gene            complement(8284..9438)
                     /gene="legC"
                     /locus_tag="SB799_001141"
     CDS             complement(8284..9438)
                     /gene="legC"
                     /locus_tag="SB799_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HEG0868380.1"
                     /translation="MFEKEISFIKSLFNQENIALHEPCFIGNEKKYLLECIDNGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKPIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILLAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKDENLRNIFLEECLK
                     NNIFVRPIWKSLPSLKAFQNCQSNELINTKNLEKRLVNLPSSVRIANKKE"
     gene            complement(9431..10402)
                     /gene="legB"
                     /locus_tag="SB799_001142"
     CDS             complement(9431..10402)
                     /gene="legB"
                     /locus_tag="SB799_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HEG0868381.1"
                     /translation="MRNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSSFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
BASE COUNT         3184 a         1698 c         1522 g         3998 t
ORIGIN      
        1 ataagcccca tccatcatct actactaagg tttgccctgt gataaatcta ctctcatcac
       61 taagtaaaaa caccaaagtt ccacatatat catcagcatc taacataccc ttgcttgcac
      121 aacattttct ataagctttt aaaaaaagtt cattttgatt atccaaaatt cctccacttg
      181 ctagggtatt aacgcgtatg ttttgattaa aaagctcttt agctagccaa gagctcatgt
      241 gattaatccc tgcttttatc acactgtatt ctaaagagct ttgcatggaa gtgccttcat
      301 aattttcaaa ttttggcgca taaactccca tgatggagct aagattgatg atattaccat
      361 agccttgttg tttaaaaaat ttcacaaatt cttgagcggc tagcataaag cctgctaaat
      421 gtaaatttaa actttcgcaa atttgttcgt atttgagttc ataataaggc gttttacccc
      481 aatctttgcc aaaaggatag cttgagttaa caaaagcatc gattttgctg tatctttctt
      541 gacttttttg aagggcggtt tgtaaacttt cttgtttagt gatatcaagt tctaagctta
      601 aaagttttgt tttaaaattt gtttctaaat tttcttgcaa tttatttaag cattctttgt
      661 tgatatctgc gagtataggg atacctttgc taagaagtat tttttgacaa agcgctttac
      721 ctatacgccc acaagctcct gctacaaaga tgattttatt ttcaagcatt aaaaatcctt
      781 tggcgataaa ttttttaaag agattaaaaa ctctacgatt ttaaaatcaa gctcgctatc
      841 aatatcaaaa gctgtgcttt catccattac aaaaagccct gtgtttttgc caaaaacact
      901 atcattttct aaaagataat cccttttaaa gatataaata ctagcgttca tatcatagca
      961 ttttggggca ctttggcgag tggtaaaatt tccttctttg gattttacta ccttgttatt
     1021 ttgtatttct acgaggttaa aataaggatt gcgtctagca ggaactgcgg tgatgagatt
     1081 ggaattatca ttttcaacaa aactttcata agcttttttt atatcaaggc ttgagcgaag
     1141 cggggctgaa gcatctaagt ctatgagagt ttcaaaacac gttttaaaat gctcttcact
     1201 tcttagcaag gcatcacgca tgacaggaag ttttgcagtc cgatcattgg caagatgagc
     1261 ttctcttttg aaaaaaactt cagcgccata tttttgggct gcacttgcga tttcatcact
     1321 atcagtactt atgactatgt gtttaaaaag ctttgaattt tgagcttgta tgatgctata
     1381 agctatcatt tcaagttcgt taatctttct aatatttttg tttttaacgc ctttgctacc
     1441 acccctagca caaatagtac ataaaatttc agccattttt tttccttact tcatcacaaa
     1501 tttcaagcac ttttaaagcc tgcttaagat cgcaaagttc tttgtctttt tcaaagactg
     1561 catgatgtaa attttgaagg gtttttatcg tatcattttc aaaatttaag attttttgac
     1621 tttgattttt gtgataaatt tcgatgttat tgtttatcaa atcggcttta aagctttttt
     1681 ctaaagtatg gatgataatt tctcttttgt taaatttaga aaaatagtct agttctatat
     1741 gaattttagc ttcttgtgaa ttttttaaag ccaaaaaggc aaaatcatcg cttgttatgt
     1801 caagctctga aattttagca ttttgggagt atataagctc taagtcttta aaaagaaaaa
     1861 aggctagatc gatttcatga gagagatcga gtaaaacccc accacctagc tcttttttag
     1921 cgctgtaatt ttgcctgtag tctaaagctc tccaatgggg caaataagaa ttacaaatca
     1981 aactagcaaa ataaattttt tcacctttta aaagcctttt taaagcgaca atcacaggat
     2041 gaaaacgcag taaatatgct acataaatgt gattttttga acttgtgaaa ttttggcttt
     2101 ttttaaataa aggtttttct acgagtatgg ttttatcttt tacaagctca tctaaagttt
     2161 ttaaggtatt aaaatgctct gtggtgatat ttgcgatgat aaaaagatca aattcgttta
     2221 aatcacattc tttcaaagag cgataaattg gagtgttttt aaattcttct tttttagcac
     2281 ttaaagaaag caaacttact tcatgattta aattttttaa ggctaaaaaa tgcttttttc
     2341 ctatgcttcc aaagcctatg attaagactt tcatttaaaa tcctcattgg cttttaaaaa
     2401 ctcatctggc cttccaatgt cgatccaata atcattgatg atataggtat ttaccttacc
     2461 tttttgtaga gcgagtttga tgagttctgg catatctagg tattcatttt tagcaattaa
     2521 atttaaaatt tcattttcaa gtacataaat ccccgcactt actaggaatt tttgtgtagg
     2581 tttttcttct atattttcta taaaaccttg tttttgagtg atcactccat aaggaatttg
     2641 ttgctcaaac tcacgcacgc aaacgctcat taaagctttt gattttttat gcgcttttaa
     2701 aagatcatta aaatcaagct cggttaaaat gtctgcattc ataacgataa aactttcttt
     2761 aaattcttgt tttataaggc ttaaagcccc tgctgtacct agttttttac gctctttaat
     2821 ataagaaatt ttaaccccaa atttttgccc tttttgaaaa taatcttcta tgatttgttt
     2881 tttataattc acacaaaaga taaaattttc aaaattttga tttttaagtc tttggactat
     2941 gctttctaaa ataggttttt tgcctacttt taacataggt tttggagtat ctttagtcag
     3001 ctcttttaag cgagagccta agcctccagc catgatgata atggagtttg gattggcttt
     3061 taaaagtgat gagatagatt ttatagaaag aatttgccct ttttcattta aaacaggaaa
     3121 gtcgtaaata tcggttttag cagaaatttt taaaagctgt tctttgcttg tgttttcttt
     3181 tatggtgatg ggatttttag tgtaaatatc tttgatacta tcttttaaag ttttgccact
     3241 aattaaagct tttctgatgt ttgaatcgct aatgactcct aaaaatttat cctttttatc
     3301 aactataatg cctaatctaa cgcgttcttg cccgactatt tttaaagctt cttttatgct
     3361 agaatcaggg gtgagtttga gtttgtttat atccacacta agccttataa atcgatgaaa
     3421 tttttatgta aaattgtatc taaatttgca ttttttaggc aagtttttat gaatttatta
     3481 ggatttttat cattatcata agggttttta aaatttttta aattttgttt aaattctttg
     3541 ctttctaatt tttcaaaagc ttgatcaaga tcattaattt cacaatcaat gatattttga
     3601 gttcttaaac gccctttttg tctatcgcct atattaatgc aaggagtttt aaaaaaagga
     3661 ctttcactaa taccacttga agaattgcct atcatggttt tggctatttt cataagactt
     3721 aggtattttt gtgagccaag attatcaaaa agtttagcct tgtgtgagtt tttttggcag
     3781 taattttgca aaatttcatt gattaaaagt ccattttcat cggcatttgc tttggtaaaa
     3841 atcaaacttg cgtttttaag ggtgtcaagt tttttaagta aggttttaat ctctttttga
     3901 gtatttttta catttaaggt taaaggatga taagtgatta agtaaagttc tttatctagt
     3961 ttcatttcta aggctttttc taaatctttt ttgtttaaaa aattcatatt ttttatgata
     4021 gtagaagcta aagaacctat attaaaaacc cttttttctt cttctccaag ttgcaaaagc
     4081 ctttttttat aaatttcatg acttacaaaa tgtaaatgcg acatttttga aatgctgtgt
     4141 cttatactat catcaatagc ccctaaagta agctccccgc cacataaatg cactaaaggt
     4201 atgtgcatca aaagacatac acttgctacg ctaagcattt cataacgatc gcctaaaatt
     4261 accaccatat caggttttaa gtcttcaaaa gcatcgctaa aagcactaaa agctaaactc
     4321 atgcttttgc aaaggcttat tttatcatca tttgcaagta ggataggaat tttcttagtg
     4381 attttaaatt ctttttctat ttctttataa gtgagtccaa actcagggct taaatgtgct
     4441 cctgtagcca tgatttgaag gcttagatct ttatcgtttt gaatttcatg acataaattt
     4501 cttaaaagat accattcagc ccttgttgca ctgactatac aaatttttct tttactcacg
     4561 gataagctca tcttctttgt agtttttagt agcaatttta cctaaaaact cttcatatct
     4621 catagcactt ataccatttg cggggcgttt ggtagtaaga ttttcttcgc taaaaatttc
     4681 tcctttttgg atatcttttt tagcgactaa actttttctt actatgttga tatttttttg
     4741 ttcgctttta cttgcttttt ttatgccatc acccattgcc ttttgtattt gtcttatttg
     4801 ggtgcaaagc atttttagtt cttgaggttc taaacttgct ttatgatcag gccctgacat
     4861 atttttgtct agagtaaaat gcttttctat tacacaagct cccaaggcaa ctgcagctag
     4921 agaaatgtgt atgccttgag tgtgatcaga ataacccaca tcaagcttaa aagcgtcttt
     4981 taagctttgc atggctttaa gattgacttc atcaaaaggg gcagggtatt ctgtagtaca
     5041 gtgtaaaaga gtgatatttt ggcgtttagc gccattttta caaagcacat ttaaagcttc
     5101 ttctacctcg cctaaatttg ccatacctgt tgaaagtatg atttttttat taagctttgc
     5161 aattttttta agatagggta gattggtgat ttctccgctt ggaattttaa agatttttaa
     5221 gcctaactca tttaaaagat ctacactttc aagatcaaaa ggagtagaaa gaaaggcaat
     5281 attgcatttt tttgcgtgta agataagctc tttatgagct ttaagatcga gttcgagttt
     5341 ttgtaccatt tgaagctgac tctcatcact agccgtggtt ttaagctgat agggtgcttt
     5401 tttagccttt gtgctgatac agtttttggc tttaaaactt tgaaatttaa caaaatcagc
     5461 ccctgaatct gctgcgattt ctattaactt tttagctaaa tttaaatcac cattgtgatt
     5521 gactcctgct tctgcaatga tgagggtttt tttcatgttt gttgcctaaa tttagtgtgc
     5581 tttatagtgt ttaaaagcaa gagtcgttcc aaattatttt aaaggatttt ttaatttaaa
     5641 ttctccaaaa tcatttttat aaaataaatc catattgtaa tgtttttcta ctattttcca
     5701 aaatgtagtt ttgctaatac ctatgaaatt acaaaaatct tcaacgcatc tattgtcaag
     5761 cttatgatct cttttttgca caagttcaat agcttctttt ctgcttaaaa gtccataacg
     5821 cacgaaacga gctgcgtaat cactcgcaca agcatgacca aatttagggt atttcatcca
     5881 agcatgtagg atatagccta tactatcaac ttgatcaaaa ttttctgcac acattgttct
     5941 ataccattcg ccttctagat cagtaaaacc acgactttta gcaaaaatat aattgctata
     6001 agaattccat tttataaaat aacttagata aataggatta agtttgttga tatcatttgc
     6061 attgggatta aaaaagagtt gtagattttc ttctttgatt tcatcatcta taaattcatt
     6121 tatatttaaa tcactagcta cgccatttaa aaatatttct ttggcgctag gagtttcttt
     6181 ggcatcacta cctccatatt cataactaac attttctcca taaaccaata aaggtgtatt
     6241 aaattttaaa gccatagcaa aaggatagct gtaaatcagt ctatcaataa accaagtggg
     6301 ttttccatat ttttcaaagg tttttagcat aacttttttt tgagttttga tattaggttt
     6361 taagctaatg atatgacaac caaaagtttc acttaaattt ttaagatttt tcttacctgc
     6421 ttcagtcatg gtgaaattat cttcaacgct aaaaagaata ggattcattc caagtttttc
     6481 tttcatgata tgcacttgaa aatgcgaatc tttacctcca cttacggcaa tagcgcaatc
     6541 atattcaaat tttccattca ttctgcggta tttatcgcat aaggcttcaa gctctttaaa
     6601 tcttgcttta taatcaatat tttctttatt tttatgattg atgcaagctg aacagatatt
     6661 tttaccttct ttatcttttg taaaattaat accaggtcta gtatttggca tcacgcagtg
     6721 atcacaataa atcattcccc accccttcaa tttaataaaa atattagatt gtataaaata
     6781 ttaaattaat atttgcttat tttataaaat atcacttatg tttgttttat ttttctacct
     6841 aaaattcctt tttataaggc ctttttaaag atttttggat ggtaaaaatt ttcatcatct
     6901 tcttttaaat ttttacaaat tttattacaa agttctatgc ctatagtgtc gataatattt
     6961 aacaaatttc ttttttcata aagcaaatca taaactgttt gacattcttt gaaattataa
     7021 tcgtattttt ctataatttt aaaaaatgat gaaatttcat tgaacaaaag caaatttgct
     7081 aaagctcctc gattgccttt actgcaaatg atatgaaatc ctaatttttt aagatctttc
     7141 aatggggtaa atcgttctaa attagaacca caaagtttta ttaatttgat ataaatagta
     7201 ttgaaaaaat gtataaaatc gcagtttaaa tcatccatac tcaaagaact tgaattcgaa
     7261 aaactatatt attatctcta agaatttgca tgatttcttt ttttaaattt aaatcttcat
     7321 ttaagctttc tatagtcaag ctatttttaa gatcttctat atgttggtaa atgtttattt
     7381 ttccggcgtt aaaattagaa aaatctattt ttctttgtag aagttttatt tgtttttcaa
     7441 attcgtatat attgagcttg cttttattat aaacacctat ttcatggcct aacaaataaa
     7501 ataaagcact tatttgctta cccattaaac caaagtctat gatattaatt tctttcattg
     7561 ttttttcctt gttttaatta tatttttatg aaaaataagt tgattggatg tgtagttttg
     7621 ctaataatac tatctgcgct tactatgcag ttatcttcta agtttacgca aggcaacagg
     7681 ctaactctag tagctaaaaa acaatttttt cctatgcttg aatttccatt aagtgtagca
     7741 taagggctta aaatacttcc ttctcctacc ttacaatcat gagctatgct tgaataaata
     7801 ttacaaagca caaaatctcc tatatttgaa ttagcattaa tggttacaaa aggacacact
     7861 ataacccctt gtcctatttt agcttctttt gaaacaaaag attgaggatg tataaaagtg
     7921 ataaaattac atgatttttt tgaaagtttt acaaggattt tttttcttaa attgatttgt
     7981 cctacaccta aagcaaaaga tgctttttga atcaactttt tatcgaagtt atcttcattg
     8041 cctagatatt ttaagtcaaa aaaaatattt tcttgtatat caatatagcc tataatttcg
     8101 taatttgcat cttttaaata agaataaagc tctctagcaa agccacccgc tcctatgatg
     8161 atgacatttt tcacgcactt ctcctaaaag aagaagtaaa aaaatcaaat cccccccccc
     8221 gctactctca tattttttct tattaaaatt tttttaatgc tttgaattaa attttgcaac
     8281 gcatcattcc tttttatttg ctattctaac gctactaggt aaattaacca aacgtttttc
     8341 taaattttta gtgtttataa gctcattgct ttgacagttt tgaaaagctt ttaaactcgg
     8401 taagcttttc catataggac ggacgaaaat attatttttc aagcattctt ctaaaaagat
     8461 atttcttaaa ttttcatctt taaaaagcaa ggtattgagc caaaaattgc ttttttcatt
     8521 gcttttttca tcgataaatt tacatttatc gtgattttta aaaaaatcct tgtaaatttt
     8581 agcaagttct cttttgtttt ctaaaaaaag ttctaaattt tcaagtcctg caagcaagat
     8641 tgctgcgttt atattgcaaa gacggtaatt ataagctatc ctatcatgat cgtattcgta
     8701 aggatggggg attttagctg tggtgctaag gtgtcttgca agtttagcta aattttcatc
     8761 atcgcttaat atcgccccac cgcatccacc tgtgatgatt ttattgccat taaaacttaa
     8821 aattccacac tttccaaaag tgcctaaggc cttgttttca taggtgcttc ctaaggcttc
     8881 tgcggcatct tcaattaaaa ggatgtggta tttttcacaa agctctttga tggcttttat
     8941 atgagcgctt aaaccaaagg tgtgcataat aacacaagct ttgatgggtt tgtgtgtggt
     9001 tttgttatag ctaagattat ctttttgata agtttgattt tctaaaaaat gctctaaagc
     9061 cttaggactt aaacttagag tgttttcatc tatatctaaa aaaacgggtt ttgcacctgt
     9121 ataagcgata gcattggccg tagcgacaaa gcttatgctt tgagtgatga cttcgcagtt
     9181 ttcatcgatg ccattagcta gtaaagcgat atgaagagct gctgtgcctg tatttgtagc
     9241 gatgacaaag cgtgctttgg ttttttcttt taaagcttct tcaaaacgcg ttacaaattc
     9301 tcctacgctt gaaacaaaac cgttatcgat acattctaag agatattttt tctcattgcc
     9361 tataaagcaa ggctcatgta aggcgatatt ttcttgatta aaaagacttt ttataaaaga
     9421 aatttctttt tcaaacatta taaagctcac ttttataatt ttctaaattt tctttaaaat
     9481 actctatgct ttgtctcaag ccttcttcta gacttatttt gctttgccaa tttgtagctt
     9541 ttttaagctt gtttgcatcg caacaaagtc taaaaacttc gctattttta ggacgcaatc
     9601 tttgttcatc ttggatgatt tttactttag aatctaaaat tttttgtatg agatcaagta
     9661 cttcttgcat ggagtattcc actcctgagc ctatattata aacttctcca aaatgtttta
     9721 aatttaaaag agagataaaa ccctcgcaag tatctagcac aaaatttaaa tcccttttag
     9781 ggcttaaatc tcctagtttg atttcctttg ctccacttaa aatttgtgtg atgatggtag
     9841 gtatgatagc ccttgcgctt tgtcttggtc cataggtgtt aaaagggcgt gcaatattga
     9901 catttaaatt aaaagaatta taataactca gcgccatcat atctgcagcg attttgcttg
     9961 cagaataagg gctttgaggt tgtaaagggt gtttttcatc gataggtaca taaaaggctg
    10021 tgccataaac ttcgcttgtt gaggtgtgga taaaatgtga aatctcgttt tttttagctg
    10081 cttcgagcat atttaaagtg ccattgacat tggtatccac atagctttgt ggggctgtgt
    10141 aggagtaggg gatagcgatt aaagcgccaa gatgaaagat cgcatctata tttttggtga
    10201 ttttttcgca aaaaaaactg tctcttaaat ctccacttat aacctccatg tcttttaaaa
    10261 aagaactttt ttctaaatgt ccccaaaaat taaaagaatt atactgactt aaagctctga
    10321 ctttaaaacc ttttttgacc aaactttcac aaagatgaga acctataaaa ccatcagcac
    10381 ctgtaactaa aatatttctc ac
//
LOCUS       DARBAC010000061        10270 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.061, whole genome shotgun sequence.
ACCESSION   DARBAC010000061 DARBAC010000000
VERSION     DARBAC010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10270
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.061"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..141)
                     /locus_tag="SB799_001143"
     CDS             complement(<1..141)
                     /locus_tag="SB799_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868382.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKINILMGANGSGKSTFL
                     RIL"
     gene            complement(143..829)
                     /locus_tag="SB799_001144"
     CDS             complement(143..829)
                     /locus_tag="SB799_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868383.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFDFKFKRFIKLIIDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            908..1717
                     /locus_tag="SB799_001145"
     CDS             908..1717
                     /locus_tag="SB799_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEG0868384.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGNPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            1859..2626
                     /locus_tag="SB799_001146"
     CDS             1859..2626
                     /locus_tag="SB799_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HEG0868385.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDKTLNLAKQNGVYIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNIKALEFVKKIKENLEKEQIQICALENFI"
     gene            2636..3376
                     /gene="pxpB"
                     /locus_tag="SB799_001147"
     CDS             2636..3376
                     /gene="pxpB"
                     /locus_tag="SB799_001147"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEG0868386.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSAYASLLIYFNPCILSLNSLLDFLEKIKKDIKLAEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            3357..4322
                     /locus_tag="SB799_001148"
     CDS             3357..4322
                     /locus_tag="SB799_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEG0868387.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGVELCLKGGKYEFLDGNYFVLSGAEFEAKLNNQKIKTYKVYKANKGDILE
                     LGLAKIGFRGYLCVAGGFEIKSFLNSKSSDAKMGVGFFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSHKEPIIRVILGTNEDAFTQKGIDTFLNTSYKVGSKSDRMAIYAE
                     SSKSIEHKNSADIISDPAVFGSIQVPKSGIPIILMAGRQSTGGYTKIGTVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMDQKINLDFENLI"
     gene            complement(4319..5215)
                     /locus_tag="SB799_001149"
     CDS             complement(4319..5215)
                     /locus_tag="SB799_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0868388.1"
                     /translation="MTRTKYLYILLVLAMFLWGSSWPTSKILSAYADTSVITFWRFFF
                     VLLGSLMVLGFLRIPLSLEKSILKWVLIAGILNGLYTFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAILFQKDKKSTHKIIKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN
                     ILFLTCSFIWALIAVFNHKAKGVHPLAINFYINLISVLMFSWVLFDVKSYEIFHFEFK
                     FWISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNAL
                     TLLGCALAIGAIYFINIYGKKA"
     gene            complement(5248..5826)
                     /locus_tag="SB799_001150"
     CDS             complement(5248..5826)
                     /locus_tag="SB799_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEG0868389.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNHALEILKTLGYEVDQTHI
                     DQRYDPKEEIQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIF"
     gene            5926..6267
                     /locus_tag="SB799_001151"
     CDS             5926..6267
                     /locus_tag="SB799_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002921808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEG0868390.1"
                     /translation="MTKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMCK
                     WGEKDKKEKNA"
     gene            6260..6709
                     /locus_tag="SB799_001152"
     CDS             6260..6709
                     /locus_tag="SB799_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HEG0868391.1"
                     /translation="MLELIGELSLQNYMGEWLEMARKPAFFQKSCLNSKAKYELKYKN
                     GVPYVEIENFCSKENEISSIKGKAKIVSNRQLAVRFNIFMNLFNKVNYEIIFIDSEYK
                     VAIVGSPDKKYLWILARNIIDEKSIKELLDIAKQRGFSVSDVIFDKY"
     gene            complement(6711..7787)
                     /locus_tag="SB799_001153"
     CDS             complement(6711..7787)
                     /locus_tag="SB799_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEG0868392.1"
                     /translation="MQYKILENNRIASKGYAMLSKDAKFTPFEFSRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVNS
                     CGECDACKRSQEQFCENGKTIFTYNSCDVFHGNENTYGGYSNNIVVSEKFAICVPKNA
                     PMHKVAPLLCAGITTYSPLKFSKIKEGSSVAIAGFGGLGMMAVKYAVKMGAKVSVFAR
                     NENKKADALAMGVSSFYTSTDKNAVKERFDLIISTIPTPYNPAIYLDLLKFGGEMAIV
                     GLPPVEDKVNIGINELVHKAGKKVYGSLIGGIAETQEMLDFSLKHEIYPETELITPQE
                     IDKAYENLTSGKAKFRYVIDMTKE"
     gene            7918..10227
                     /locus_tag="SB799_001154"
     CDS             7918..10227
                     /locus_tag="SB799_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEG0868393.1"
                     /translation="MQNLYSEDDTRVKFIDAKLYDSSWNEENIKRNYYFTDGRKLLGG
                     KRAQRKFADYLLRYEGNNLAIIEAKKFSKDPLDGLSQGIEYAKILNVPFVYSSNGEKI
                     YEYDIRSHSGKYIDKFPSPKELFDRIYGNVKEWQYRLLTQNVMYIPQKELRYYQKIAI
                     DKVIEAIINNKNRILLTLATGTGKTTIAFNLCYRLLEARWNKENKDQKPKILFLCDRV
                     SLRDQALGEFNPIESDCKAISAEEIKKNDGKIITNANVFFGIYQSLAANSKEQENTQE
                     EQESKFYLQYPKDFFDLIIIDECHRGGANEEGSWRAVLEYFSYATQLGLTATPKKEEN
                     IDTYEYFGESVYDYSLKSGIEDGFLTPYKVKLIKTTLSDGYTYNPDDLIQGELEKGFY
                     KQSEFERNIFLPNYNDFIAKKILELINPMDKTIIFCANQAHANEVKRAIDKYKSVKRD
                     DYCVRVTSDEGKIGLDYLKQFQDNDKSFPVILTSSKMLTTGVDAKNVRNIVLLANIGS
                     MVEFKQIIGRGTRVYEGKDFFTILDFVGATKLFYDPKWDGEKIKELKEQNKQEKITKE
                     QIKQTKEESKEKKSVTIHLKGTKLKVLDITTSYVGAQGKPLSTKEFLEFLIGKLGEYY
                     DDEAKLREIWSDQKNRERFLKALANDGVDEDALKDLRKIFQKDCDIYDVLAHLSFNAE
                     IKTRQERVLQVENGEFLKRFQKEKAIKFIEFLLNRYQEYGIKDFDDGLKPLIELSSLG
                     NVRELADEFGGLEILKQSFDDLQREIYAR"
BASE COUNT         3848 a         1489 c         1730 g         3203 t
ORIGIN      
        1 taatattctt aaaaatgtag attttccact tccattcgct cccattaaga tgttaatttt
       61 actcgtatca agttttaaat ttttgatttt taaaacttct ttgttttgat agttgaaaaa
      121 aagattagaa atttctatca ttttatgttc ttttgagttt gtgtgtgatg aaatttaaac
      181 aaaaggcaat gagaattaaa accaaagcca aagctatacc gctagcaaat tcgcctttgt
      241 tggtttcaag tgaaatagct gtggttatgg ttctagtgtc gtatttgata tttccaccta
      301 ctatcatcgc tactcctact tctgctacaa tgcgtccata agctagtgca acgacgctaa
      361 tcaaagcaaa gcgtaattca taaatcatgg ttaaaacaag ttttaaagga cttagatgaa
      421 aagattttat aagtaaaaaa tgttttttat tcatattttc tatcaaattt gaaaaaagcg
      481 caatcactat aggaagcgct aaaataaact gccctaaaat taaagccttt atagtaaaaa
      541 gtagtccaaa ttcccctaaa ggtcctcgac ttgaaatcaa tgcataaagt ataagcccta
      601 ctgcaactgt tggaaaagag aggctagtat ctatgataag ttttataaag cgtttgaatt
      661 taaaatcaaa aaagcctaag ataaatccca aaggaaaacc tataagcaaa gccaaaacta
      721 tagaaatact tgagcttaaa agtgtagttt ttatagccga aattacgctt tcatcggcat
      781 tgaaaagtaa aaataaagct tgtttaaaac catcaaaaat ataatccaaa aatatccttt
      841 ttaaaataag taattttagc ataattatgc taaaatattt ttttatgtaa atttataagg
      901 agaaaaaatg aaaaaaatca tttctttagc ccttgcttta gctttaagtg caagtgcagc
      961 agaacttaaa atggcaacca caacaagcac tgacaataca ggacttttag atgccctaaa
     1021 gcctctttat gaaaaagaaa gtggcaatac cttaaaatgg gttgcggtag gaacaggtgc
     1081 agctttaaaa atgggtgaag attgcaatgc tgatgtgctt tttgtgcatt ctccaaaggc
     1141 tgaaaaagaa tttatgaaaa aaggttttgg tgtagataga actcctgtga tgtataatga
     1201 ttttatcatc atcgcagata aatctttagc ttctaaattt aaaggtaaaa atttaaaaga
     1261 aagcttagaa cttatcaaaa atgaaaaact cactttcatc tcaagaggtg ataaatcagg
     1321 cactgataat aaagaaaaaa gtctttggaa aaatcttggc ggtgttcctg aaaaacaaag
     1381 ctggtatcaa caaagcggac aaggcatgtt agcaagcatt aaaatcgctg aagaaaaaaa
     1441 aggtgtgatt ttaaccgatc gtggtaccta tatcaaatat gaagccaatg aaaaaggaaa
     1501 tccaaactta gtcattgtaa atgaaggcga tgatagtctt aaaaatttct attctgttat
     1561 agcaacaaat cctaagcatt gtaaaaatgt aaattataca gaagctagca aatttattaa
     1621 atgggtaaca agtgataaga ctttaaattt tattgctgat tttaaacttc ttaataaacc
     1681 tttatttgtg attgatgcaa aaacgagaaa agactaaaaa ttaagcaggt tttaacctgc
     1741 ttaaaatatc attttttact tattgtaact tttttattta tttttcaaaa cttttagctt
     1801 atttaaaatt cttctttaga tataataaaa tcaataatta aatatacaag gtcaaataat
     1861 gttcaaagtg gatttaaata gtgatttagg ggaaagtttt ggcgcctata aaatgggaat
     1921 ggatgaagaa attttaaaat ttgtaagctc agtaaatgtc gcttgtggct ttcatgcggg
     1981 tgatccttgt gtcatggata aaaccttaaa tttagccaag caaaatggtg tttacatagg
     2041 agcacaccca tcttatcctg atcttttggg ttttggaaga cgcaatatgc aaataagctt
     2101 tgaagaggct aaaaactatg ccttgtatca actaggagct ttatttggct ttgccaaggc
     2161 aaaaggtatg aaaatacagc attttaaagc ccatggtgca ctttataata tggcagctat
     2221 tgatgaaaat ttagccttag cactttgtga ggcagtggcg agttttgatg aaaatattat
     2281 ttttctaggg cttagtaatt ctgctatgaa tgaagcggct aagaaaaaag gtttaagata
     2341 tgctaatgaa gtttttgcag atcgtgctta taatgatgat ggcactttag tttcaagaaa
     2401 attagaaggg gcattaatac acgatgaaaa tttagctatc aaacgcgtga taaaaatgat
     2461 aaaagaaagc aaagttacaa gcataaatgg caaagaaatt gatttgaaag ccgatagtat
     2521 ttgtgttcat ggggataata taaaagcttt agaatttgtt aaaaaaatca aagaaaattt
     2581 agaaaaagaa caaattcaaa tttgtgcttt ggaaaatttt atataggttt tagcaatgtt
     2641 tagtgtgcat tttagcggaa gcaaggcttt gcttttacgt tttgagcaag aaatttcacc
     2701 tcaaatcaat gcttatgttt taagtacaga acaaagaata caaaaagccc taaaagaagg
     2761 tgaaatttat ggtattgatg agttagtaag tgcttatgca agcttgctta tatattttaa
     2821 tccttgtata ctttctttaa attccttgct tgattttttg gaaaaaatta aaaaggatat
     2881 taaacttgca gaacaaaact caagtctttg tatagaagtt ccactttgtt atgatgaaga
     2941 atttggactg gatttagaat ttgtgtgcaa acacaatcaa atttcaaaag aagagcttat
     3001 atctcttcac actaagcctt attatcttgt ttttatgcta ggttttatgg caggttttcc
     3061 ttatcttgga ggtttagatg aaaggctttt taccccacgc ctttcaagcc ctagagcaaa
     3121 aatagaagct ggaagtgtag gcatagccga taaacaaaca ggagtttatc ctatatcaag
     3181 cccagggggt tggcaaatca ttgctagaac acctttggaa ttttttgata aagaagatga
     3241 aaaaaatcct actcttttaa aagcgggtat gtttttaaaa tttaaagcta tttcaaaaga
     3301 tgaatttttc gatatccaag agcaagttgc taaaaaagtc tatcaaaagg aaatttatga
     3361 gtataaaaat cattgaagca tctataaatt caagtttgca agactttggt agaaaaaaat
     3421 ttgctaaatt tggcatagca agaagtgggg ctatggatga agatgcttta agaatggcaa
     3481 atatcttact tggaaacaaa caagatgaag caggagttga actttgttta aaaggtggaa
     3541 aatacgaatt tttagatggg aattattttg ttttaagtgg ggctgaattt gaggcaaagc
     3601 ttaataatca aaaaatcaaa acttacaagg tgtataaagc aaataaaggc gatattttag
     3661 agcttggttt agcaaaaata ggttttcgtg gatatttatg cgtagcaggt ggctttgaaa
     3721 taaaaagctt tttaaactct aaatccagcg atgctaaaat gggagttgga ttttttgaag
     3781 gaagagcttt gcaaaaagat gatattttaa atactcataa tacttttata ccttttaatt
     3841 tagaagctag agaatgtgaa aatcctcttt ttaaaagcca taaagagcct attatacgcg
     3901 ttattttagg aacaaatgaa gatgctttta ctcaaaaagg catagatact tttttaaata
     3961 ctagctataa agtaggttca aaaagcgata gaatggcaat ttatgcagaa tctagcaaaa
     4021 gtatagagca taaaaactca gcagatatca tctcagatcc tgcagttttt ggaagcatac
     4081 aagtgccaaa aagtggtatt cctatcattt taatggcagg aagacaaagc acaggaggtt
     4141 atacaaaaat aggcacggtt atagaaaatg atctaagctt actcgcacaa gctaagttag
     4201 gttctagctt taaatttcaa agcattagca tgcaagaagc cttagagctt tataaacaaa
     4261 gagaaatgaa atttaaagcc atggatcaaa aaatcaatct tgattttgaa aatttaatct
     4321 aagctttttt accataaata ttgataaaat atatagcacc tatagccaag gcacaaccta
     4381 acaaggtaag tgcatttggc acctcatcta gtataaaata actacaaatt aaagcactag
     4441 caggagtgat taaaacaaaa gaatttgcct taacgctccc taaaatgtga atcccataat
     4501 aataaatact agtacctata atagttgata aaaaagcaac gacaaacata ctgatccaaa
     4561 atttaaattc aaaatgaaaa atttcataac tttttacatc aaacaatacc caagaaaaca
     4621 ttaaaacaga aatgagatta atataaaagt taatcgccaa agggtgaact cctttggctt
     4681 tatgattaaa cactgctatc aaagcccaaa taaaagaaca agttaaaaat aaaatattaa
     4741 atttgccaaa taaatcttct aaactcccta aatttaacaa acaaaatcca gataataaac
     4801 ctaaaaataa gcctagaatt tcactcttta tgatcttgtg agttgatttt ttatcttttt
     4861 gaaataatat cgctatcata aatatcaaat aagaaaaaat aggaatcata gttgtaacca
     4921 aaacaccgcc ttttccagct aaaccatgct taatggcaat aaaaaataca aaagtataaa
     4981 gcccatttaa aattcctgct atcagcaccc attttaaaat ggatttttca aggcttaaag
     5041 gaattcttaa aaagcccaat accatcaaag aacctagcaa aacaaagaaa aaacgccaaa
     5101 aagtaatcac agaagtatca gcataagctg ataaaatctt agaagtaggc caagatgagc
     5161 cccataaaaa catagctaaa acaagcaaga tatacaaata ctttgttcga gtcaatgtta
     5221 caccttgaaa tttttaagtc aaatttttta aaaaattttt ttcaagtgta gttcatactc
     5281 gtttagatat ttttccactt gaggattttt taccacatca ttacacataa aagttggtaa
     5341 agctttcata cctataaatt catgagcctt atgcaaatgc caatacacca tatccacacc
     5401 ctttccttca aaaaattcat ttttatcatt aaaggcttca agaggtgcat tccaagtgag
     5461 agaaaacatg tattttttac catgatctaa accacctttt ccatagtttt tactaggatt
     5521 ttcatgagtt cttccatcat ttttaaaaag cactccagca cccaaaccaa acacttcatc
     5581 gatatatttt ttaactatcc aaggctcgcc catccaccaa gctggcattt gatagatcac
     5641 agcatcagct tttataaatt tttgtatctc ttctttagga tcatatcttt gatctatatg
     5701 agtttgatct acttcgtatc ctaatgtttt taaaatttct aaagcatgat tatgcaatgt
     5761 taaattaagc tgtccttttg aatttccaaa ttctttagcg ccattaagca agagtatatt
     5821 tttcattttt atcctttttt aaattttatg atacaattat aacttagcat aatatcattt
     5881 tcaatacaga aaataaagta agatactata ctaaaggaat gttaaatgac taaagagaat
     5941 tctcagtgca atttcgaaga atgcggattt aactatactc tagcattaat taatggaaaa
     6001 tataaaatga gtattttata ctgcttattt cgctatgaaa tcgtgcgtta taatgaactc
     6061 aaacgctttt taagctccat atcttttaaa actttaacca ataccttaag agaactagaa
     6121 aatgatggtt taattatcag aaaagaatac gctcaaattc cacccaaggt agaatatagc
     6181 ttatccaaac gcggacaaag tttaattcct attttacaag ctatgtgcaa atggggcgag
     6241 aaagacaaaa aggaaaaaaa tgcttgaatt aattggcgaa ctttctttgc aaaattatat
     6301 gggagaatgg cttgaaatgg ctagaaaacc tgcttttttt caaaaatctt gcctaaattc
     6361 aaaggcaaaa tacgagctta aatataaaaa tggcgttcct tatgtagaaa ttgagaattt
     6421 ttgcagtaaa gaaaatgaaa tttcaagcat aaaaggcaag gcaaaaatcg tttcaaatag
     6481 gcaattagca gtgagattta atatctttat gaaccttttt aataaggtga attatgaaat
     6541 catttttatt gatagcgagt ataaagttgc cattgtgggt agtcctgata aaaaatatct
     6601 ttggatttta gcaagaaata taattgatga aaaaagcata aaagagcttt tagacatcgc
     6661 taagcaaagg ggatttagcg ttagcgatgt gatttttgat aagtattaaa ttattctttt
     6721 gtcatatcaa taacatagcg aaatttagcc tttcctgagg ttagattttc ataagcttta
     6781 tcgatttctt gtggtgtgat aagctcggtt tctggataaa tttcgtgttt taaagaaaaa
     6841 tcaagcattt cttgagtttc agcaataccg ccaattagcg agccataaac ctttttacct
     6901 gccttatgta caagctcgtt tatgcctata tttaccttat cttccacagg tggtaagcca
     6961 actatagcca tttcgccacc aaatttaagt aaatccaaat aaattgcagg attataaggc
     7021 gttggaatgg ttgagatgat taaatcaaag cgttctttta cggcgttttt atcagtgctt
     7081 gtgtaaaatg agcttacacc catagctaaa gcatcggctt ttttgttttc atttctagca
     7141 aaaacgctaa cctttgcacc cattttaaca gcgtatttta cagccatcat accaagtccg
     7201 ccaaagcctg ctatagcaac gcttgagcct tcttttatct tagaaaattt taaaggcgag
     7261 taagtggtaa tgcccgcaca aagcaaaggc gcaaccttat gcattggtgc attttttggc
     7321 acacaaatgg caaatttttc acttacaact atgttgtttg agtagccccc ataagtgttt
     7381 tcattgccgt gaaatacatc gcaactattg taagtaaaga tggttttgcc attttcgcaa
     7441 aactgctctt gtgagcgttt gcaagcatcg cactcaccgc atgaatttac catacaacca
     7501 acccctgcgt aatctcctac tttaaatttg ctcacatttt tacccacagc gataacttct
     7561 cctgctatct catgcccagg tacgcaagga taagtagctt ctccccactc gcttcttgcg
     7621 gtgtgaatat cgctatgaca aatacctgca tataggattt taatcaaaat atcattatca
     7681 ccaatagcgt ggcggctaaa ttcaaagggt gtgaatttcg catctttact aagcattgca
     7741 tagcctttac ttgcgatgcg attgttttct aaaattttgt attgcatttt cgctcctttt
     7801 ttgatttttt ataattataa aacattagag tagctataag tcaagagtga aaataatttt
     7861 tttaaaaact agtataaatg ctataattat aaaatttaat ttcactttgg ggtaaaaatg
     7921 caaaatttgt attcagaaga tgatactaga gtaaaattta tagatgcaaa gctttatgat
     7981 agttcttgga atgaagaaaa tataaaaaga aattattatt ttacagatgg tagaaagctt
     8041 ttaggtggta aaagagcaca aagaaaattt gcagattatt tgcttagata tgaaggaaac
     8101 aaccttgcta taatagaagc taaaaaattt agcaaagatc ctttagatgg tttatctcaa
     8161 ggcatagaat atgcaaaaat tttaaatgtg ccttttgtat atagtagcaa tggagaaaaa
     8221 atttatgaat acgatataag aagtcatagt ggtaaatata tagataaatt cccaagtcct
     8281 aaagagcttt ttgataggat ttatggcaat gtcaaagaat ggcaatacag gcttttaacc
     8341 caaaatgtta tgtatattcc gcaaaaagaa ttaaggtatt atcaaaaaat agccatagac
     8401 aaagtcatag aagctattat aaataacaaa aatagaattt tactcactct tgctacaggc
     8461 acaggaaaaa caaccatagc ttttaatttg tgttatcgtt tgttagaggc aagatggaat
     8521 aaagaaaaca aagatcaaaa gcctaaaata ctatttttat gtgatagagt gagcttaaga
     8581 gatcaagcct taggagaatt taatcctata gaaagtgatt gtaaggcaat tagtgctgaa
     8641 gaaataaaga aaaatgatgg aaaaatcata acaaatgcaa atgttttctt tggaatttat
     8701 caaagcttag ccgcaaattc aaaagaacaa gaaaacaccc aagaagaaca agagagcaaa
     8761 ttttatcttc aatacccaaa agattttttt gatcttatca tcatagatga gtgccacaga
     8821 ggtggagcaa acgaagaagg aagctggaga gctgtgcttg agtatttttc ctatgcaact
     8881 cagcttggtt taaccgctac tccaaaaaaa gaagaaaata tagacactta tgagtatttt
     8941 ggtgagagtg tttatgatta tagtcttaaa agtggtattg aagatggatt tttaacccct
     9001 tataaagtca aactcataaa aacaactttg agtgatggtt atacctataa tcctgatgat
     9061 ttgatacaag gtgagcttga aaaaggcttt tataaacaaa gtgagtttga aagaaatatc
     9121 tttttaccaa actataatga ctttatcgct aagaaaattt tagagcttat aaatcccatg
     9181 gataaaacta taattttttg tgcaaatcaa gctcatgcaa acgaggtaaa aagagccata
     9241 gataaatata aaagtgttaa aagagatgat tattgtgtaa gagttacgag tgatgaaggt
     9301 aaaatagggc ttgattatct aaagcagttt caagacaatg ataaaagctt tcctgtcata
     9361 cttacaagtt ctaaaatgct tacaacgggc gtggatgcta agaatgtccg caatatcgtt
     9421 ttactagcaa atataggctc tatggtggaa tttaagcaaa tcatcggacg tggaactaga
     9481 gtatatgaag gtaaagactt ttttaccata cttgattttg ttggcgctac taagcttttt
     9541 tatgatccaa aatgggatgg tgaaaaaata aaagaactaa aagagcaaaa caaacaagaa
     9601 aaaattacta aagagcaaat aaaacaaaca aaagaagaaa gcaaagaaaa aaagagcgtc
     9661 actatacact taaaaggcac aaagcttaag gttttagata taactacaag ctatgtagga
     9721 gcacaaggta agccacttag cactaaagaa tttttagaat ttttgatagg aaagcttggt
     9781 gagtattatg atgatgaagc aaaattgcgt gaaatttgga gtgatcaaaa aaatagagaa
     9841 agatttttaa aagcccttgc aaatgatgga gtagatgaag atgctttaaa agatctaaga
     9901 aaaatttttc aaaaagattg tgatatatac gatgttttag cgcatttaag ctttaatgcc
     9961 gagataaaaa caaggcaaga gcgtgtttta caagtagaaa atggtgagtt tttaaaacgc
    10021 tttcaaaaag aaaaggctat aaaatttata gaatttttac taaatagata tcaagaatac
    10081 ggcataaaag attttgatga tggcttaaaa ccgcttatag agcttagttc tttaggcaat
    10141 gtaagagaat tggccgatga atttggtggc ttagaaattc taaaacaaag ttttgatgat
    10201 ttacaaaggg agatttatgc gaggtgatat gtttaaagat aaatttgaga tttttagtta
    10261 aaataatctc
//
LOCUS       DARBAC010000062        10131 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.062, whole genome shotgun sequence.
ACCESSION   DARBAC010000062 DARBAC010000000
VERSION     DARBAC010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10131
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.062"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            41..2038
                     /locus_tag="SB799_001155"
     CDS             41..2038
                     /locus_tag="SB799_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEG0868394.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRAMVVESKLAYPEGRAAAEILKVANKDQSNKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDTSSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKFIVMQYLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
     gene            2112..2915
                     /locus_tag="SB799_001156"
     CDS             2112..2915
                     /locus_tag="SB799_001156"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEG0868395.1"
                     /translation="MENLNALIFGIIEGLTEFLPVSSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAAGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVFILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLSNANSLIPLGIGFITAFV
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFVFFYLYYSGILNAGSEFKL"
     gene            3047..4855
                     /locus_tag="SB799_001157"
     CDS             3047..4855
                     /locus_tag="SB799_001157"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEG0868396.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKNLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHILYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEVATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVHEKNESLSKKIRTAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            4852..5370
                     /locus_tag="SB799_001158"
     CDS             4852..5370
                     /locus_tag="SB799_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEG0868397.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            5409..6500
                     /locus_tag="SB799_001159"
     CDS             5409..6500
                     /locus_tag="SB799_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEG0868398.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLSFLNKGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLEDYSKLINECYLANKDKDLLQNIKKHYKNLIQ
                     NLDFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDASMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKPKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            6540..10131
                     /gene="vvfC"
                     /locus_tag="SB799_001160"
                     /pseudo
     CDS             6540..10131
                     /gene="vvfC"
                     /locus_tag="SB799_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter serine protease VvfC"
BASE COUNT         3495 a         1154 c         1992 g         3490 t
ORIGIN      
        1 aatatttttt aagttgaaag taaaatttta aaacggagaa atgatgtaca aaaaacaaaa
       61 tttaccagaa cttaccttaa ggggtttgat tttgggaagt attttaacta ttatttttac
      121 agcttcaaat gtatatttgg ggttaaaagt gggacttact ttttcatcat caattccagc
      181 tgtggtcatc tccatggcgg ttttgagtct ttttaagact tcaaatattt tagaaaataa
      241 tatggttcaa actcaagctt cagcagcagg aactttatca tcagttattt ttgttatccc
      301 agggcttttt atgtgtgggt attggagtga atttccactt tggcaaactt ttatgatatg
      361 tctttgtggt ggtggacttg gagtgctttt tactatacca ttaagaaggg ctatggtggt
      421 tgaaagtaaa cttgcttatc ctgagggtag agccgcagct gaaattttaa aagtagccaa
      481 taaagatcag agtaataaaa aaggaaaaca aggcattaaa gaaatagcat taggctcttt
      541 tatagctgct atttttagtt tattaagcaa tggttttaaa ctcgctgcaa gtgagagtaa
      601 ttttgctttt atttggaata aaatggcttt tggtttttct atgggatatt ctttggcact
      661 tttaggagca ggttatttag ttggtttagc aggtgctata gctctttttg taggtatgtt
      721 tttagcttgg ggtattttta ctccctatct ttcaaatttt gaatttgata gtgcaaaaaa
      781 tgccgtagat ttagcttcta gtgtatggag ttctaaagta aggcttatag gaacaggagc
      841 tattgctata gcagcgcttt ggactttaat agaactttta aaacccgtta ttgaaggtat
      901 taaagaaatt gttaaaaatg ttaaaattac taatcaagaa aaaaatgaaa gaacaaatat
      961 agacctttct ttaaaaagta tttttatact ttttgtttta atggttgtgg gtttatttat
     1021 tactttttat agttttgttg aagatgctaa cttaagtatt tattatcaaa tgctattttc
     1081 atttgttgga actttagttt ctgttttaat aggttttttt gttgcagcag cttgcggata
     1141 tatggcagga cttgtaggat cttcttctag tcctatttct ggaatcggac ttattggtgt
     1201 tattatttct tctattgttt ttttggtttt aggtgtggaa ctttttcaag atcctatgct
     1261 ttctaaattt gcagtagcat tagctatttt tactactagt gttattttgg ctacagctgc
     1321 tatttcgaat gataatttac aagatttaaa gacaggacat ttagtcggag ctactccttg
     1381 gaagcaacaa gttgctttac ttgtaggctg tgtttttggt gctttggcta tagttcctgt
     1441 tttaaatttg ctttatcaag cctatggttt tgttggagca atgccaagag aaggtatgga
     1501 tacttcatcg gctttagcag caccgcaagc gaatttaatg agtactatcg ctcaaggaat
     1561 ttttcatcac aatatagagt ggggttatat ggcttttggt gtatttgtag gaattttaat
     1621 gattattata gataaaattt taagaagaac acagaaaatg tctttgccgc ctttagccgt
     1681 tggaataggt atttaccttc cgcctgctgt aaatatacct ttagttatag gcggaatttt
     1741 aaaatttatt gtaatgcaat acttgactaa aaaatatgca aaaaattctc ataaagaaga
     1801 aaaacttgca agttgtgagc aaagaggcac gctttttgct tcagggctta tagtgggtga
     1861 aagtattttt ggggtaatta tcgcaggaat tactgtattt tcagtaagta tgggtggtag
     1921 tgaaaatcct ttagctttaa atttagcaaa ttttcatgat agcgagcttt tcgcacttat
     1981 cttttttgtg ggagttgtat tatattttat taagcgtatt gttaaaaaag atgcttaatt
     2041 tttggggtta aaaccccatt taatccattc tgatataatt tttcttttgc aattatcatt
     2101 caaggattaa aatggaaaat ttaaatgctt taatatttgg aattatagaa ggtctgactg
     2161 agtttttacc tgtttcttca acaggacata tgattttagg tacgactatt ttaggtattg
     2221 atatagatga gttttggaaa agttttttga ttatcatcca gcttggttct attttggcgg
     2281 taatttttgt attttggcgt aaattgtttc aagggcttga tatttggtta aaacttgcag
     2341 cgggattttt tcctactgga gttatagggc tttttgtggc aaaatactta aatgctttat
     2401 ttaatggttg ggttgtggtt ggaatgctca tttttggtgg tgttgtgttt attcttatag
     2461 aacttgcgca caaaaataaa caatatcgta tcaattcctt agaagaaata agctttaaac
     2521 aagctttttg tataggtatt tttcaatctt tagccatgat tcctggcact tcaaggagtg
     2581 gagcaagtat tattggtggg cttttgttag gatttaatag aaaagtggct gctgagttta
     2641 gttttttgct tgccattcca acgatgatta ttgctacagc ttatagtatt tataaagagc
     2701 ctgaattact gagtaatgca aattctttaa ttcctttagg cataggtttt atcactgctt
     2761 ttgttgttgc ggttttagtt ataaaatttt tcttaaaatt tatttctaaa ttcgacttta
     2821 tcccttttgg aatttatcgt attattttag gatttgtttt cttttatttg tattatagtg
     2881 ggattttaaa tgctggaagt gaatttaagc tataaataaa tattaaactt attctaagat
     2941 tttttttaaa aataagctga atttcaaaaa taattaagtc ttagaaagtt aaaattagaa
     3001 ctttataaac actcacaggg taagtgagcg acaaagggtt aaaaatatgg aaaaagaagt
     3061 tattgcgtat ttggacaatg agacaataat tgactctcaa agtgtgaaaa atacaaattt
     3121 aaaagaaatt tattttgata attctaaaga aagtttagag gtaatccgtc attcttgtgc
     3181 gcatttaatg gcacaggcga ttaagaattt gtatcctgaa gctaaatttt tcgttggtcc
     3241 tgttatagaa gatggatttt attatgattt tcgtgtagaa agtaagattg gcgaagaaga
     3301 tttagtaaaa attgaaaaaa agatgaaaga acttgctgaa gcaaagattg aaatttcaaa
     3361 atatgaaatc acaaaaaacg aagctttggc taaatttcaa aatgatgatt taaaacaaga
     3421 agttttattg cgtattcctg atggagctgt aagtatttat aaacaaggtg aatttgaaga
     3481 tttgtgtcgt ggtcctcatg tgccaaatac gaaattttta cgctttttta aactcactcg
     3541 tgttgcagga gcgtatttgg gtggcgatga aaaaagagaa atgcttactc gaatttatgg
     3601 gactgctttt gcagataagg aaagtttaaa agagtattta accattattg aagaagctaa
     3661 aaaacgcgat catagaaagc ttggaacaga gcttaaactt tttacttttg atgatgagat
     3721 cggaggtggt cttcctatct ggttgagtaa tggtgcaaga cttagatcta aacttgaaca
     3781 tatactttat aagatccatc gtttgcgtgg ttatgagcct gtgcgtggac ctgagctttt
     3841 aaaagcagat gcatggaaaa tcagtgggca ttatgcaaac tataaagaaa atatgtattt
     3901 tacacaaatt gatgaacaag aatatggtat taagcctatg aactgtgtgg ggcatattaa
     3961 aatttatcaa agtgatgtaa gaagttatcg tgatttgcct ttgaaatttt ttgaatatgg
     4021 cgtggtgcat cgtcatgaaa aaagtggggt tttgcacgga ctttttagag tgagagaatt
     4081 cactcaagat gatgcacata ttttttgtat gccaagtcag attaaagagc aggttttaga
     4141 aattttagct tttgtggata atttgatgaa attatttgat tttagctatg agatggaaat
     4201 ttcaactaaa cctgaaaaag ccataggtga tgatgaaatt tgggaagtgg caactaaggc
     4261 tttaaaagaa gctttagatg aacaaggttt aaaatacggt attgatgaag gtggcggggc
     4321 tttttatggg ccaaagatcg atattaaaat caccgatgcc ttaaaaagaa agtggcaatg
     4381 tggaactata caagtagatt ttaacctacc aagtcgtttt aaactcgaat atactgatag
     4441 tgataatgaa aaaaaacaac ctgtaatgtt gcatcgtgcg attttaggtt cttttgaaag
     4501 atttatagga attttaaccg agcattgtgc gggtgagttt ccatttttta tcgcaccaac
     4561 tgcggtgggt atagtgccaa taggcgaagc acatattgct tacgcaaaag aaattcaaaa
     4621 agaattatta gagcttaata tcgatagcga ggtgcatgaa aaaaatgaga gtttaagtaa
     4681 gaaaatacgc acagctgaaa aacaaaaatt acctatgatt ttagttttag gcgatgatga
     4741 ggtggcaaag cgtagcgttg ctttaagaga tagaagagct aaagaacaaa aaaatcttag
     4801 cttagatgaa tttattaaat tagttaagga gaaaatgagt gaggtacact tttgagtaaa
     4861 gaaaaagaag tattgctcaa tgaagaaata agagcggatg aaatcagatg tgttggcgat
     4921 gatggcaagg tttatggtat tattagtagt gatgaagctt tagaaattgc aaatcgttta
     4981 ggacttgatc ttgtaatgat agctgcagat gctaagccac ctgtttgcaa gatcatggac
     5041 tatggtaaat tccgttatca acaagagaaa aaacaaaaag aagcaaagaa aaaacaaaaa
     5101 gtgattgata taaaagaaat caaactttct gtaaaaattg ctcaaaatga tattaactac
     5161 aaggtaaaac atgctttaga atttttagaa caaggtaaac atgtgagatt tcgtgtgttc
     5221 ttaaaaggac gtgaaatggc aactcctgaa gcaggtgtag ctttgcttga aaaaatttgg
     5281 actatgatag aaaatgaagc taatcgtgac aaagagccaa attttgaagg tcgttatgta
     5341 aatatgcttg taactccaaa aaaagcttaa tccacttttg tggataaggc ttttaaaggt
     5401 tttaaatttt gaaagaaaat ccttcttttt taaaagagca aattataact tatcttggaa
     5461 ataaaagagc gcttttaagt tttttaaata agggctttaa ggtagctaaa aaagaacttg
     5521 gtaaagataa atttagtttt tgtgatatat ttagtggctc aggtgttgta agtcgttttg
     5581 caaaagcgca ctcaaattat attttagcca atgatttaga ggattattca aaactcatca
     5641 atgagtgtta tcttgccaat aaagacaaag atttacttca aaatataaaa aagcattata
     5701 aaaatttaat ccaaaattta gattttcaaa aaggttttat cagtgagctt tatgctccaa
     5761 aagatgatga tgatattaaa aaaaatgaaa gggtttttta tacttttaaa aatgctttat
     5821 atcttgatac tataaggcaa aaaatcgaaa atgaaattcc aaaagaattg aggcatttct
     5881 ttatagctcc tttgatttat gaagccagtg ttcattcaaa tactagtgga gtttttaaag
     5941 gtttttataa gggtaaggat ggcatcggaa aatttggtgg cgaaggacaa aatgcactta
     6001 aacgaattaa aggagaaata gagcttaaaa tgcctatttt ttcaaatttt tcttgtgaat
     6061 ttgaagtgat gcaaaaggat gcaagtatgc ttgcaaaaga acttgatttt tttgatgtag
     6121 tgtatcttga tcccccttat aatcaacacc cttatagttc taattatttt atgctaaatt
     6181 taatcgcaaa ttataaaaaa cctgaagaaa tttctaaaat cagtggcatt ccaaaagatt
     6241 ggaaccgtag cacttttaat aagccaaaat ttgcccaaga tgctttattt gaacttatta
     6301 atgatttaaa agcaagagtg attttacttt cttataattg tgaaggtttt gtaaaaaaag
     6361 aaattttttt aaagcgttta agtactcttg gaaaatgtcg gattttagaa caaaaatata
     6421 atacttttag agcttctcgc aatcttaaaa atcgtaatat ccatcttcat gaacaacttt
     6481 atattttagt taaaaattaa attttgtgct aaaattatat ttataaaaag gagggattta
     6541 tgaaactaaa attatctttt tgtgcattaa tggcatttgg tttttctaat tatctttttg
     6601 cttcggccat tgatccaaag ttttattttc aagaatatct tgattttgct agcaataagg
     6661 gtaaatttca agtaggtcaa attggctttg aaattttagc aaaaaatcct aatcaaaaca
     6721 tctctttcaa tgtacctatg attgattttt ctacttcaaa tcgtggagga aaattccaag
     6781 gagaatttac caatatagga caatcttata tagtcagtgc ttctcatatg agtacaagtt
     6841 caaatactgg ggaagtaaat aaaggctatg tgaaacaagg tagtgtttta cactttggag
     6901 gtgtagcaaa tagaatcgta agctcaagtg ataattttac ttataagaaa gaaaatgtgg
     6961 attttgctgt tttaaaaatg agtaagatca atctcaataa aagtgcaaat ttgagtaaag
     7021 atttcaattt tattgaaaaa gattctggcg atggtggaga tatttatgaa tacaaggatc
     7081 ctttttggga tagttgtcaa agtggaaaat gtgattattc taaaggcaaa ggcaagcttt
     7141 ttgatagttc gcgttatgag tactttgtaa gagagggaag tggtattgta gctttaggtt
     7201 ttgaagatac aaataaagta cccattaaga tttttgattc taatgaaatt aatttaggag
     7261 gttttgtcag tttagctcct aaaaatactg aagataagcg ttttaagttg caatttctta
     7321 attataccaa tgataaaaga aatcctttta caagttcttc aacacctggg gattctggaa
     7381 gtggagttta tgtttatgat aagattgata aaaaatggta tttagtaggt gtagtaagta
     7441 cgagtaattg taatgcccat tttactgatg gatatacttg ttcacaggtt gattatgctt
     7501 tgatcaatca agcaaagatc aatgaatttc aaaatagcca tagggttaat atcgcacaag
     7561 gcgtttatac tttaagcaat caaggtttga tgaaagaagg gcagttggtg caaggtgtta
     7621 gcttaatttc tggggctaat gcgggttatg taagttatga aaatattttt ggtgataagg
     7681 ctaaatatga tgatagaatc aaagaaatgc aaaatagcaa ggatttgtat ttttttcaaa
     7741 atggaagtat aaatttaaat agcgatgtgg atttaggcgc tagtgtttta aattttgaac
     7801 aaaattcaaa ttggcaaata acaggcgata aatggcttat acatggagga atttacgctg
     7861 ataagggttc aagtatagaa tataatgtta aaaccaaaaa agatgatttt ctttataaaa
     7921 tgggcgaagg agaacttatt gtcaaaagtc aaagtgcgga tgcaggactt aggatgggtg
     7981 agggtaaggt aagtcttgag ggtgaaggtt taagttttgg tgaaatttat atgaatggtg
     8041 gaactttagg gtttaaaaac gcacaaaatt taaaaaccga cactttatat atgaatggtg
     8101 gaactttgga tctatcgggc ttaacattaa atttttgatc aaattaaagc caattctaat
     8161 aatgttttta tcacaagctc taaagcaggg gcaaatttaa atttagaaaa caagcaaaat
     8221 tatctttatt atggcaatat tttttcagat gaggccataa caattagtgc taatacagat
     8281 aaagctttga tttttgatgg caatatttac aataaagaag gtgtttttaa ggcagaaaac
     8341 gccaagttaa attttcaagg acatgctaga atacacgctt atgtaagcga agaacaagct
     8401 aaaaaacttc aagagcaagg tttaagtgct ttaaccaaac ctgtaagttt tacacaagaa
     8461 gattgggaag atagggtttt ttgttttaaa agagcttaat ttagaaaaaa gcgagtttta
     8521 tttaggacgt aatgcaagct taaaagtaga aaatcttaat gctaaaaatt ccaaaataga
     8581 gcttggaagt aaaaatttgt ggatcgatga aaaagatggg gaaaatatca ctgataaagt
     8641 tcaagatagt ttttatggag acgttgcaca aacaggagtt ggtaaagaaa tgggatttga
     8701 gcaaaatctt aaaaataccc aaaatgctaa gatagaaaag gtttatttta gtggaaattt
     8761 aaatcttgat cattctgatg ctactttaca aaacatagtt tttagcggta atattaaagg
     8821 tgttgatgat gcacaaaaaa atcttgtgat taaagattct ttgcttgagt ctaatataca
     8881 aatgagtaat attcaagcag aaaaaagtgc catttatggg aaagttgatg caaaaaaatt
     8941 aagtgcaaat aatacaatat ttaaaatcaa tgtggatttt gaaaaatcta aggcagatta
     9001 tattaattct aaggaaagcg cgcaaggaac aaataatact ttagtattaa attttttaac
     9061 aatcctagca aagaagcggg tttaaatata ttactagctc atttaaaaga tgaaaataaa
     9121 catttaacaa aggaattttt tactatacca aatgtggagc aaggttttag tatttatacc
     9181 ccaaatgttg ttttttctta caatgaggaa aattttgccc agtggaattt agaaaaaatt
     9241 gattctaaaa ctaaagatga gtattttttt actaatgata atactcaagc tattgcaaaa
     9301 gctaaatcta tacttgctca agctactttg gctccatgat agaatggaat aatatgcata
     9361 aaagaatggg agaattacgc aataatcctt acgaaagtgg ggtgtggtta agaacttttg
     9421 gtgggggtac gagtgatgag tataatagtg gaaaatactt tgaaattcaa agcggatatg
     9481 ataaattaaa cgagtattcg aatttcgagc tttatagcgg ggtgatgatc aattatacaa
     9541 atatgaattt aagtgctact gatttgagtg cgaaattaaa tggttatgga ataggacaat
     9601 attttagcct tttgtttaat gaaggttttt atagtgattt tgttttagat atatttatta
     9661 tcaaaatgaa ataaatgcaa attttattcc aggaaatcaa ggtagattag atgataatga
     9721 tggttcgcat aatattatct taagtgctga gttaggttat agaaaagctt ataataaatt
     9781 ttatcttgag ccgagtttgg aatttatcag tggttatgta ggagctatgg atctaaaagg
     9841 agatattgct agtttaaaac gattttctta tattccttta gtcgtaaaaa cagcattttt
     9901 cataggaagt caaaattaaa atttaaattt tagaacagga cttggtttgt atgcggatcc
     9961 gattaaagca ggagatcaaa tcttggagga tcaagcaagt cagagaagat atgaaggaaa
    10021 aaagatcaaa gaatgtttat aaatttagga aatgattata agcttaacga taaaacacgc
    10081 tttagttttg aatttgaaaa gacatttttt ggcgatttaa atgtagattg g
//
LOCUS       DARBAC010000063         9485 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.063, whole genome shotgun sequence.
ACCESSION   DARBAC010000063 DARBAC010000000
VERSION     DARBAC010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9485
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.063"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..307
                     /locus_tag="SB799_001161"
     CDS             <1..307
                     /locus_tag="SB799_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEG0868399.1"
                     /translation="LNFLNIITCNFISNKILQNQNKKNLFYQIKDFENLAKKRYERYE
                     NLGFWVCEGHYHQNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            300..1256
                     /locus_tag="SB799_001162"
     CDS             300..1256
                     /locus_tag="SB799_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HEG0868400.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGI
                     NKLEELSQVYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            1260..3569
                     /locus_tag="SB799_001163"
     CDS             1260..3569
                     /locus_tag="SB799_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEG0868401.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVAATDSNEKSTPQAEPEAPKQETTTPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPAESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLVEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            3574..4095
                     /locus_tag="SB799_001164"
     CDS             3574..4095
                     /locus_tag="SB799_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HEG0868402.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            4095..4718
                     /gene="serB"
                     /locus_tag="SB799_001165"
     CDS             4095..4718
                     /gene="serB"
                     /locus_tag="SB799_001165"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEG0868403.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMAGEL
                     DFFESLQKRVSLLKGMSYKKVLELGSTLPLMHGAHELIQYLKSKNIQIVIFSGGFHEG
                     IDPAMQKLGINLSFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI"
     gene            4718..5695
                     /locus_tag="SB799_001166"
     CDS             4718..5695
                     /locus_tag="SB799_001166"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEG0868404.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKGKRTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAISKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMD
                     FKKPLMNFEIYTELNQIISQSEREKACNDLLSDGIEQFCIAFEDILKAL"
     gene            complement(5696..6118)
                     /locus_tag="SB799_001167"
     CDS             complement(5696..6118)
                     /locus_tag="SB799_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HEG0868405.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(6115..9384)
                     /gene="carB"
                     /locus_tag="SB799_001168"
     CDS             complement(6115..9384)
                     /gene="carB"
                     /locus_tag="SB799_001168"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEG0868406.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYARMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTVPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDNHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
BASE COUNT         3320 a         1556 c         1567 g         3042 t
ORIGIN      
        1 tttaaatttt ttaaatatta ttacttgtaa ttttatttca aataaaattc ttcaaaatca
       61 aaacaaaaaa aacctttttt atcaaataaa agattttgaa aatttagcga aaaaaagata
      121 tgaaagatat gaaaatttag gattttgggt atgtgaagga cactatcatc aaaatcatca
      181 aatcaacaaa gaaaacatta aatatcttaa cttagctagt tttgcatatg agagaagttt
      241 ttttgtagta gaatatcagc aagaaatcaa atttcgagaa cagaaattga ggggtcaaaa
      301 tgtttgatga aaatatcgtg aaaacgggtt caaatgaaat ggagcttgtc gatttccgta
      361 tctttaagca aggacacgat aaagtctatg aaggaattta tggtgtaaat gtttctaagg
      421 taagggagat tataaaaatc ccaagcctta cagaacttcc aggtgtacct gattacatcg
      481 aaggtatctt tgatcttcgt ggagtggtta tacctgtagt caatcttgcc aaatggatgc
      541 aaatcactga gccagaaagc actatgttaa aacctagggt tattattact gaatttagca
      601 atatccttat tggttttata gttcacgaag caaaaagaat tcgtagaata aactggaaag
      661 atatagaacc agcaactttt tctacaggat caggtgcttt agataaaggt aaaatcacag
      721 gtgtaacacg cattgaaaat gatgaagtgt tgctaatttt agatcttgaa agtgttgttg
      781 aagatttagg aatttacgct ccaaaaacag atatagattt tggaaaaata gaaaaattta
      841 ctggaacagc acttatactt gatgacagca tgactgctag aaaacgcgtc aaagaaatga
      901 tgcaacagat gggctttcaa gttgttgaag ctaaggacgg cgtagagggc ataaacaaat
      961 tagaagaatt aagccaagtt tatggtgaaa gtttaaatga tactttaaaa attatagtaa
     1021 gcgatgtcga aatgccacaa atggatggtt tccactttgc tgcacgcatt aaagaagatc
     1081 caagatttaa agatattcct atagtcttta actcgtcttt atcaaatgaa tttatgaatg
     1141 agaaaggtgt tcaagaagct ggtggagaag gctatcttgt caaatttaac gctagcgatt
     1201 tcttcaatga aattgcaaag gttatcaaaa aacatcaatc tcaagaacag gggtaaaata
     1261 tggaagatat gcaagaaata cttgaagact ttttggttga agcttttgag cttgttgagc
     1321 aaatcgacca tgatttagta gagcttgaat caaatccaga agatttagaa ttattaaata
     1381 gaattttccg tgttgcacat acggttaaag gatcatcaag tttcttaaat tttgatgttt
     1441 taacgaagtt aactcaccac atggaagatg ttttaaacaa agcaagacat ggcgagttaa
     1501 aaataactcc agatatcatg gatgtggttt tagagtctat tgatagaatg aaaactttgc
     1561 ttaattccat tcgtgataat ggcaacgata ctgctattgg tatggatata gaaccaattt
     1621 gcgcaagatt aacagctatt tcagaaggag agtctcctgt tgcggcaaca gattcaaatg
     1681 aaaaatctac tccacaagca gaaccagaag caccaaaaca agaaacaact actcctgaac
     1741 ctgaagtaga tgttaatcaa ttaagtgatt ctgaagttga agctgaaata gaaagacttt
     1801 taaaagttag aaaagctgaa gatcaagctc gtcgcgcaca aaagaaacaa acaacaaatg
     1861 cggcacctaa accgactaac aatacagcaa ataaacctgc ggaaagtgga gagaaaaaag
     1921 ttcctgcttc aggtagcaat gctagcagta tggatcaaac catacgcgtg gaggtaaaaa
     1981 gattagatca cttaatgaat ctaattgggg agcttgtttt aggtaaaaac cgtttgctta
     2041 aaatttacga tgatgttgaa gagcgttatg aaggagaaaa attccttgaa gaacttaatc
     2101 aggttgtaag tcaattaagt attattacaa ctgatgttca gcttgctgta atgaaaacaa
     2161 gaatgcaacc tatagcaaaa gttttcaata aattcccaag agttgttcgt gatttgagtc
     2221 gtgaattagg aaagcaaata gaacttgaaa ttacaggtga agaaactgaa cttgataaat
     2281 ctatcgtaga ggaaattggc gatcctatca tgcatatgat tagaaattca tgtgaccatg
     2341 gtgttgagga tccagcaact cgtgcagcta atggaaaacc tgaaaaaggt atagttcaac
     2401 ttaaagctta taatgaaggc aatcacatcg ttgtagaaat tacagacgac ggtaaaggac
     2461 ttgatccaaa tggcttaaaa gcaaaagcta tagagaaaaa tttgattacc gaaagagaag
     2521 cagatcaaat gacagacaaa gaagcttttg ctttgatttt caaacctggt ttttcaactg
     2581 cggctaaagt aacaaatgtt tcaggtcgtg gcgtaggaat ggatgttgtt aaaaccaaca
     2641 tcgaaaaact aaatggggta attgaaattg atagtgagtt aggtaaagga agttcgttta
     2701 aacttaaaat tcctcttacc ttggcaatca ttcaatcttt acttgtagga actcaagaag
     2761 aattttatgc aattccactt gcaagcgttc ttgaaacagt tagagtacca attgatgata
     2821 tctatactat cgaaggtaaa aatgtattac gcttaagaga tgaagtgctt tcccttgtga
     2881 gactttcaga tgtatttgga gttaaacaag tccttgaaag cggtgatcaa acttatgtcg
     2941 ttgttatagg ggtagcagaa agcaagcttg gtattatagt agatactctt gtaggacaag
     3001 aagaaatagt tattaaatcc atgggtgatt atttacaaaa tatccaaggc atagcaggag
     3061 ctacaatccg tggtgatggt agagtgacat taatcattga tgtaggtgct atgatggata
     3121 tggccaaaga aattaaagtt gatattaaag cgcaattaga atcaagcgcg aaaaaaccta
     3181 aagaacaacc aagtgattat aaagtcttaa ttgtagatga ttctaaaatg gatagaacct
     3241 taatgcaaaa agctttagaa ccgctaggag ttagtttagt tgaagcaaca aatggtgttg
     3301 aagcattgaa tattataaaa tctggcgaac atgatattga tgcaatgctt atagatatcg
     3361 aaatgccaag aatggatgga tacaccttag ctggtgaaat tagaaagtat tctaaatatc
     3421 gtaacctacc actcattgca gttacttcaa gaacaagtaa aactgaccgc ttaagaggtg
     3481 ttgaagtggg tatgactgaa tatatcacta aaccttattc tccagaatac ttggaaaatg
     3541 tggttagaaa aaatttgaaa ctaggataag aatatgagta atgaaaaatt agagcaaatt
     3601 ttgcaaaaac agcaaactca gatggctggt cctgatgtcg atcaaagaga agatgatatc
     3661 atccaacttg tcggctttgt agttggagat gaggaatatg cgattccaat tcttaatata
     3721 caagaaatca ttaaacctat agaatatact agagttccta gtgtacctga ttatgttcta
     3781 ggggttttta atatgcgtgg taatgttatg ccactcattg atctagctca acgctttcat
     3841 ttaggaagtt ctaaaatgac acctcaaaca agatatattg ttttaagagg tgagacaaat
     3901 ggaactggag ttggaggaaa tgctggtttt gttatagata gattaactga agcaattaaa
     3961 attcacagaa acagaatcga tccaccacct gaaactttag ttaaagacaa aggtatgatt
     4021 tatggtatag gaaaaagaga tgaaaatatc ttaactatac tcaaagtaga agctttactt
     4081 aagcgcgaat tttaatgatt aaactttgtg tttttgactt tgacgctact ttaatggatg
     4141 gtgaaaccat cgatatttta gctacagcgc atggcaaggg taatcaaaca agcgaaatta
     4201 cccgccatgc catggctgga gagcttgatt ttttcgaaag tcttcaaaaa cgagtaagcc
     4261 ttttaaaagg tatgtcttat aaaaaagttt tagaattagg tagcacactt ccactaatgc
     4321 atggagcaca tgaacttatc caatatttaa aatctaaaaa tatacaaatt gttattttta
     4381 gcggtggttt tcatgaaggc atagatcctg ctatgcaaaa acttggaatt aaccttagtt
     4441 ttgcaaatta tctgcatcat aaaaatgaca ttttaacagg gctagttggt ggggaaatga
     4501 tgttttcaaa ttcaaaaggc ttaatgctac aacgattaaa aagcttttta aatttgaaaa
     4561 cagatgaagt gatgtgtgtt ggcgatgggg caaatgattt ggcaatgttt aacgaaagtg
     4621 gattaaagat tgcattttgt gctaaagaaa ttttacgttc ccaagctgat atttgcatag
     4681 atataaaaga cttaaaagaa ataataaagg taatataatg aaaaattttt ctctttggtg
     4741 tgattttata gaaaatagtt ttttagataa tgaattttta aatttattat cacatggaat
     4801 taatggtgct acttcaaatc ctgctatttt taaaaatgct attttaaatt ctccaattta
     4861 taaagataaa attcttaaat taaaaggaaa aagaacaaaa gatatttatg aagaattagc
     4921 aatttctgat attcaaaaag cagctgataa attagcccct cttttttatc aaaaaaatga
     4981 tggatttata agtattgaaa tagatccaag acttcatgat aacacgactc ttagtttagg
     5041 cgaagctaaa agactttata gtgctattag caaagaaaat gtaatgatta aaattccagc
     5101 tacaaaagct tcttatgaag taatgtatga acttatgaaa aatggtatta gcgtcaatgc
     5161 taccttaatt ttttctcttg aacaaagtca aaaatgtttt gaagctttaa atgcaggttt
     5221 agtcgaattt agaaaaaaca atatagcctt aaaagaacaa aatactagaa caccacaagc
     5281 tgttataagt atttttgtaa gtcgttttga tagactttta aatcctaaag ccaaagagca
     5341 aaatcgtatt ggaattttaa atgcaaattt agcttataac aatatctact caaaaaatga
     5401 acctaatatt cgcgccttgt ttgcaagcac tggagttaaa ggagatgatc tgccaaaaga
     5461 ctattatatc aaagaacttc tttttgagaa ttctgttaat actgctcctc ttgatgcaat
     5521 agaggcattt aaaggaaaaa tggattttaa aaaaccttta atgaattttg aaatttatac
     5581 agaacttaat caaatcattt ctcaaagtga acgagaaaaa gcttgcaatg atttgttaag
     5641 cgatggcata gagcaatttt gtattgcttt tgaagatatt ttaaaagctc tttaattaac
     5701 gtatttttat cattttattc tttgaaagtt ttaatatttt tgatgggata ttttcgaaaa
     5761 atttctcatc aagtattata tcagcaacac ttctagccca ttcttcatca aattcttttc
     5821 catgcttgtt tgccgaagat gaataaaaat agccattttt acttaaaaaa ttcgcatgtt
     5881 tacactcttt cacaatacga atggcctgat tatttggata aataaaagtt gtttttttag
     5941 aacgacgtac taaattttta aaagattttg gaattcttgc taaacttttt aactcgcaaa
     6001 atttcgcaga agtgattaag caaggttgat ttttatctct accttttaaa gcattaatct
     6061 cttctaaatt tttacttaaa aatcctaccg tagtatctgt ttgagctaaa taaatcaaga
     6121 tttaagccac tcttgcaaac tctttacatc taggcaagat ttactctgta tagctttaat
     6181 cgattttgca cctgctaaag ctgatcgtaa atttgtaaaa taaggtattt taaaacgaat
     6241 aatattttca cgaatttttt tcgtatcacc tttaaaactg tgattatcac ttgtattgat
     6301 aactaagtga atttctccat ttttcaattt atcttcaaca ttggggcgtc cttctgaaat
     6361 tttatgtaca agttcgcact caaaaccact ttctaaaatt tccttacaag ttccccctgt
     6421 tgccataagc ttaaagccaa gctttacata ttctgcagcg atttttttgg tatatttttt
     6481 atccttatct tttaaggaga taaataccac gccttgctct ggcagatgat taaacgatgc
     6541 gatttgactt tttgcgtaag aatttgcaaa atccttactt atacccataa cttcacccgt
     6601 tgaacgcatt tcagggccta attctaaatc acttccgcta agttttgcaa atggaaatac
     6661 tgcttctttt acgctcatat attttggagt tttagggcgt aaaattttag tatcaaaatt
     6721 aaccactttg aaagtatcat aaaattttaa agcttctttt aaatttcctt gccacatcac
     6781 acgcgttgcc acttttgcta aaggaatacc cgtagcttta ctaacaaaag gcacagtacg
     6841 actagctcta ggatttactt ctatcatata aagctcatta ttatgtaaag caaattgtat
     6901 atttaaaagc cctacaactc ctaaatttaa agcaatatct gcggtttttt gtgcaataaa
     6961 ttcttgcatt ttttcatcga tattacaagg tggtaaagaa caagcactat cgcctgaatg
     7021 aattcctgct tcttctatat gctccataat tcctgccaca taaacatctt tgccatcaca
     7081 aatcgcatca acatcaattt ctgtagcatt gtctaaaaac tgatcgatca aaacaggact
     7141 tttatcactc acatccacag cttcttgcat atagagtcta agttcggcct catcatttac
     7201 cacacgcatc gcacgcccac ctaaaacata acttggtctt acaagcacag gatatcctat
     7261 atcactagct ttaagcaccg cttcttccac acttgttgca gtggaatttt ttggctgatt
     7321 aatacctagc tttgtaataa attcagcaaa tttctttcta tcttctgcca tatcaattac
     7381 tcttgcacta gtacctataa ttttagctcc aaaagcgctt aaacgcttag caaatttcaa
     7441 aggagtttgt ccgccaaaat gcacaatcac tccatcaggt ttttcacgct caatcaccgc
     7501 tcttaaatgt tcaaaatcaa taggctcgaa atacaaaata tcacttgtat catagtcagt
     7561 cgaaacggtt tcaggattac aattatacat aatagtttta atacccatat ctttaagcgc
     7621 aaaagaagca tgtacgcaag catagtcaaa ttctatacct tgtcctatgc ggtttggccc
     7681 cccgcctata atcatcactt ttttttcttt tttatcctta gcatcgtttt tactttgagt
     7741 aagttcgctt acattaatac ttgaataaag ataaggagtt aaagcttcaa attcacccgc
     7801 acaagtatcc acttcgctaa attctgcaat gattttttgc ttcattcttg cataataaat
     7861 atcattttgg cttaattcta aattatcttt caaatttaca agcaaggcta tcattttatc
     7921 tgaaaaaccc atagtttttg cttttctcaa aagagcttta ttgtttaaaa tatccatatc
     7981 aatttgctct tcaaaatcta caatttcttt aatctgtgtt aaaaaccaag gatctatttt
     8041 acaaagctca taaagttctt ctacgctaaa accttctcta aaagcttgag caacataaag
     8101 caaacgcttt tcattggcat tgcgaatttt aaaaacaaga tcatttctat cttcaaattt
     8161 tactctatca aaaccactca aagaacgctc aagagaacaa agtgcttttt gtatactttc
     8221 tttaaaagta cgtcctatag ccatcacctc acccacactt ttcatagctg tacctaaagt
     8281 tgtgtttgcc cctggaaatt tttcaaaagt aaagcgagga atttttgtta caatataatc
     8341 aatcacaggc tcaaaagatg caggagttcc tgtaatatca tttttaatct catctaaact
     8401 aaagcctact gccaaaagtg tcgcaacctt tgctatagga tagcccgttg ccttagaagc
     8461 taaagcactt gatcttgaaa ctcttggatt catttctata actatcattc ttccattttt
     8521 tgggttgata gcaaactgca cattacttcc gcctgtatct acgccaattt cacgcaaaat
     8581 agcaaaagaa gcattacgca taacttgata ttctttatcc gtcaaagtta atgctggagc
     8641 tattgtaata ctatctcctg tatgaactcc cataggatcg atattttcta tactacaaac
     8701 tatgatacaa ttatccgctc tatcgcgtat aacttccatt tcatattctt tccaacccaa
     8761 caaactttct tcaatcaaaa tttcatggat aggcgataaa gctaaagcag tattggcaag
     8821 ttctttaaat tcgtccatat tataaaccac accacttcca gcacctccta aagtataaga
     8881 agcacggatc atcaaaggaa agccaatttc atctacagct tttaaagctt catcataatt
     8941 atacgcatac atcgattttg gcaaatccat gccgattttt ttcatacatt ctttaaagac
     9001 ctgacgatct tcaccttttt taatcgcctc agggtttgca cctaaaaatt tcacatctcc
     9061 taaaagtcca ctttcataaa cttccatagc aacatttaac gctacttgtc cacccatggt
     9121 tggtaaaatt gcatcaattt tttctttttt aataatactt aaaatacttt cttttgttat
     9181 gggttctata taagtcgcat ctgcaaattc gggatctgtc atgatggttg caggatttga
     9241 gttgattaat actacacgat atcctaattc ttttaaagtc tttgcggctt gagttccaga
     9301 ataatcaaat tcacaagctt gtcctatcac aataggacca cttcctataa gtaaaatgct
     9361 tttaatatct gttcgttttg gcataaattt tcctaagagc ataaatttgg gctgattata
     9421 acaaaaatta gttttataaa ctttgaaatt atcgatataa tttaaaaaat aaacactctg
     9481 ctttt
//
LOCUS       DARBAC010000064         9456 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.064, whole genome shotgun sequence.
ACCESSION   DARBAC010000064 DARBAC010000000
VERSION     DARBAC010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9456
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.064"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..593
                     /locus_tag="SB799_001169"
     CDS             <1..593
                     /locus_tag="SB799_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0868407.1"
                     /translation="DAILNSFQGAFKALGLTSKNNEEIKNLIGYPLEQMFRMLYPDKV
                     NLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADLGIVTTKGGKFTPILLDY
                     LGVKKFFKTLITLEDVTNPKPSSEPIILALKRLNKTQENAYMIGDTILDIQAAISANI
                     TPLALACGYGNENELKAYSMVFLNAYEAVNYIARLN"
     gene            686..4246
                     /gene="nifJ"
                     /locus_tag="SB799_001170"
     CDS             686..4246
                     /gene="nifJ"
                     /locus_tag="SB799_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEG0868408.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERVIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIVDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            4270..4581
                     /locus_tag="SB799_001171"
     CDS             4270..4581
                     /locus_tag="SB799_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEG0868409.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIHEINTKEIKFQYDNLEIAIQINKNNKINI
                     N"
     gene            4559..5971
                     /gene="mshL"
                     /locus_tag="SB799_001172"
     CDS             4559..5971
                     /gene="mshL"
                     /locus_tag="SB799_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HEG0868410.1"
                     /translation="MIRLILINILFCHYLYALDCQKRLFDISINEKLSIQESLDELAK
                     YCSFSIIVKDKIAKEKLETLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGI
                     NTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQNIE
                     KEIIVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVIID
                     VSILAVSLNESHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNFDS
                     IINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNN
                     YSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSS
                     VVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKVTEIVFIITP
                     SIVDSVNAPSLKDLGFKHYE"
     gene            5964..6572
                     /locus_tag="SB799_001173"
     CDS             5964..6572
                     /locus_tag="SB799_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868411.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
     gene            6576..7163
                     /locus_tag="SB799_001174"
     CDS             6576..7163
                     /locus_tag="SB799_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HEG0868412.1"
                     /translation="MQERIKELELRYKYFLLKKYLKYLLLVILISVIAFCFFVLMQKY
                     NKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYKELEEVKAVQENTHISKIE
                     IDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWTLKANELDKQKQDSW
                     LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK"
     gene            7153..8712
                     /locus_tag="SB799_001175"
     CDS             7153..8712
                     /locus_tag="SB799_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEG0868413.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNDDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLHKLNLGDKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            8709..>9456
                     /locus_tag="SB799_001176"
     CDS             8709..>9456
                     /locus_tag="SB799_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEG0868414.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYFMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKNLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFV
                     IFIVMLILAYKNFHSFAFSCDFLFLKVPLIS"
BASE COUNT         3418 a         1178 c         1697 g         3163 t
ORIGIN      
        1 ctgatgctat tttaaattct ttccaaggag cttttaaagc ccttggatta acttctaaaa
       61 ataatgaaga aatcaaaaat ctcataggtt atcctttaga gcaaatgttt agaatgcttt
      121 atccagataa agtaaattta agtaaagaat ttgtattagc ttatcgtgaa atttatgcac
      181 aaatttattt agaacaaact actcttttgc ctaaagcaaa agaagcatta gaacttggaa
      241 gcgaaattgc agatcttggt atagttacaa caaaaggagg taaatttact ccgattttac
      301 ttgattattt gggagttaaa aaattcttta aaactttaat tactcttgaa gatgtcacaa
      361 atccaaagcc aagttccgaa cctataattt tagccttaaa aagactcaat aaaactcaag
      421 aaaatgccta tatgataggc gatacaatac tagatattca agctgcaatt tctgctaata
      481 tcactccttt ggccttagct tgtggctatg gcaatgaaaa tgaattaaaa gcctattcta
      541 tggtattttt aaatgcatat gaggctgtta attatatagc tagattaaac taatttcaag
      601 ttttcgttaa acgcctttta agagaattta tagtaaattg atagctaaaa aattataaaa
      661 attatcaata taaaggaagg tctcaatggg taaaattatg aaaactatgg acggaaatga
      721 ggctgctgca tacgctgcgt atgcttttac tgaagttgct ggaatttatc ctattacacc
      781 tagttctcct atggctgatt acaccgatat gtgggcagct gcaggcaaaa aaaatctttt
      841 tggagttcct gtaaaaatcg tagaaatgca aagtgaagca ggagctgcag gtagtgtgca
      901 tggatcttta caagctgggg ctttgacgac aacttataca gcttctcaag gattactcct
      961 taaaattcca aatatgtata aaatagcagg tcaattactc ccctgtgtaa tccacgtagc
     1021 agcgcgttct ttggctgctc aagctttgtc tatctttggt gatcatcaag atatttatgc
     1081 agcaagacaa attggttttg ctatgctttg ttcgcattct gtgcaagaaa ccatggactt
     1141 agctggtgta gcacatttag ctgcgattaa gggaagagtg ccatttttac atttttttga
     1201 tggttttaga acaagccatg aaattcaaaa agttgaagtg atggattatg cgcattttga
     1261 tagattatta gatagagaag ctttgcttga atttagaaat aatgctttaa atccagaaaa
     1321 tccaaaaaca cgcggaacgg cacaaaatga tgatatttat tttcaaacta gagaagtaag
     1381 caatcgtttt tatgatgctt tgcctgatgt tgttaatgaa tatatgcaag aaatttcaaa
     1441 aattacaggt agagaataca agccatttac ttattatggt cacaaagagc cagagcgtgt
     1501 gattgttgct atgggttctg taactcaagc acttgaagag gtagtggact atcttaatgc
     1561 taagggtgaa aaagtaggga ttttaaaagt ttatctttat cgcccattta gtttaaaata
     1621 tttctttgat gttatgccaa aatcagtgaa aaaaattgca gttttagata gaaccaaaga
     1681 accaggaagt cttggggaac cactttatct tgatgtaaaa tcagctttct atggaagaga
     1741 aaatgctcct gttatagtag gtggaagata cggactttct tcaaaggatg ttgatcctgc
     1801 tcaaatgata gcagtatttg aaaatcttaa acttgataat ccaaaagatg gctttactgt
     1861 aggtatagtt gatgatgtaa ctcatacttc actgagtact ggagagaaaa tttcacttgg
     1921 agatgaaagt acgatcgaat gtttatttta cggacttggt gctgatggaa ctgtgggtgc
     1981 aaataaaaac tcgattaaaa tcatcgggga taaaacggat ttttacgctc aagcttattt
     2041 tgcttatgat tctaaaaaat cagggggtta tacaagaagc catttaagat tttctaaaaa
     2101 acctatccgt tcaacttatc ttgtttcaac tccgcatttt atcgcttgtt cggtagcggc
     2161 ttatttggaa atttatgatg ttttagcagg aattcgcaaa ggaggaactt tccttttaaa
     2221 tagtatttgg aatgctgaag aaaccataag acaacttcca gatgcagtaa agaaaacttt
     2281 agctgaaaaa gaagtaaatt tttatatcat caatgcaacc aaactagctc gtgatatagg
     2341 tttgggaaat cgtacaaata ccattatgca atcagccttt ttcaaacttg caaaaatcat
     2401 tccttatgaa gacgcacaaa aatacatgaa agagcttgcg tataaatctt atagtaaaaa
     2461 aggcgatgct attgtagaaa tgaattacaa agctattgat gtgggggctg atggacttgt
     2521 aaaagttgaa gtggatccaa attggaaaaa tttagagctt aaagaaaaag aacaaaccaa
     2581 tgcctataaa ggcactgaat ttgttgaaaa aatcgtaaaa cctatgaacg cagctaaggg
     2641 tgatgattta cctgtttcag cttttttagg ttatgaagat ggaagttttg aacacggcac
     2701 aaccgaatac gaaaaacgcg gtgttggggt tatggtacca agatggatag aggcaaattg
     2761 tattcaatgt aatcaatgcg cttcagtttg tccacatgct gttatcaggc catttttgat
     2821 taatgatgaa gaaatggcaa atgcacctcg tggagtaaaa gatcatgctt tagaagctaa
     2881 aggaaccaaa ggagaaaaat taagctttaa aatccaagtt tctccacttg attgtacagg
     2941 ctgtgagctt tgtgttcatg agtgtcctac taaagaaaaa tctttggtta tggtaccact
     3001 tcaagaagag atggattttg gtgagcaaga aaatgcggat tatttattta aagaaattac
     3061 ttataaagat gatattttaa ataaagaaac cacaaaagga gcacaatttg cccaaccttt
     3121 atttgaattc catggggcat gtcctggatg tggggaaact ccttatatta ctttaattac
     3181 aagattgttc ggtgaaagaa tgattgtggc taatgcgaca ggttgtagtt ctatttatgg
     3241 gggttcagct ccatcaactc cttatagaaa aagtgtgaaa aatggacacg gtcctgcttg
     3301 gggaaattca ctttttgaag acaatgctga gtttggtttg ggtatgaaaa ttgcaactga
     3361 aaacacaaga caccgcattg aacatatcat gaatgaaagt atgcaagaag ttccaaatgc
     3421 tttatcagcc ctttttaaag attggattgc aaataaagac aatggtgcta tgtctgtgga
     3481 aattaaagat aaaatgatcc ctattttaga gcaaaataaa aatattaaag ccgtacaaga
     3541 tatattagag cttaaacagt atttaagtaa aaaatctcac tggatttttg gtggtgatgg
     3601 ttgggcttat gatataggct atggcggact tgatcatgtt ttagcaagtg gagaaaatgt
     3661 aaatatttta gtgcttgata cagaagttta ttctaataca ggcggtcaaa gttcaaaatc
     3721 ttctagaaca ggagctgtag cacagtttgc agcagcaggc aaacctatac agaaaaaaga
     3781 tctaggtcaa attgctatga cttatggtta tatttttgta gcacaagtaa attcaacggc
     3841 aaattatact catcttatca aagctatcac tgcagctgag gcctatgatg gaccatcttt
     3901 ggtgatttgt tattctcctt gtatagctca tggtattaaa ggtgggcttg gttattcagg
     3961 agagcaaggt gagcttgcta caaaatgtgg ttattggcca ctttatacct ttgatcctcg
     4021 tttagaagag caaggaaaaa atcctttaac tctaacagga aaagaacctg attgggattt
     4081 atatgagcaa tttttgatga atgaagtgcg ttataattca cttaaaaaag caaatcctga
     4141 acacgctgct gagctttttg aacgcaataa aaaagacgct caacgtcgct atagacagct
     4201 taagcgtatc gctatggctg attatagcaa tgaggttgaa agctgataaa atatattttt
     4261 agtgctacat tgtgttttag cactttgttt gcacaagata attttgaaga gtactttaaa
     4321 cttatagata aagaaaatcg cataaatttt aatactcttc aaaacccatt tgtgaatcct
     4381 acttttgaaa aattaagaca tattaaaatt actgcaatta tgcttgataa agtaaaaatt
     4441 tatgatcgat ggtataaaaa aggtgatatg attgatgatg ctataataca tgaaataaat
     4501 actaaagaga ttaaattcca atatgataat ttagaaattg caatccaaat aaataaaaat
     4561 aataagatta atattaatta acattctttt ttgccattat ctttatgctt tagattgtca
     4621 aaagcgtctt tttgatatca gtattaatga aaaattaagc atacaagaaa gtcttgatga
     4681 gcttgcaaaa tattgttctt ttagtattat tgttaaagat aaaattgcca aagaaaaatt
     4741 agaaacattg caaaactctg tcaatattca tcaaatgagt ttagacgaaa tttttaattt
     4801 ttttatcaaa gagcatgatc ttagctatga ttttgatggt aaaattttaa gaatttcagg
     4861 cattaatacg aagattttta agataagtta tatcacttct atcagagaag gacaaagcat
     4921 aactaaagcg tctgtagacg ctaaaccaag gcaaagtgaa tatagcggta gttttgatga
     4981 cgcagaagac aatatgatta aaagtatgga aaaatttgat ttttggcaaa atatagaaaa
     5041 agagattatt gtattattaa aaaattctca tgaagattat gaggctaaaa ctcccattat
     5101 aaatcccaat gcaggtctta ttatagtaac tggaacaaat tctcagttaa aaagtgtgaa
     5161 aaattatttg caaaaactag aaaatcgtct taaaaaacaa gttattatcg atgttagcat
     5221 acttgctgtg agtttaaatg aaagtcattc tagtgggatt aattggcaaa attttaatat
     5281 aggtttaaat tcgcaagtaa ataatgaaaa ttcttttatt cagtttcaaa atgggcaagg
     5341 ttttgttaag aatttgggtt taagggcgaa tttaaatttt gattctatta ttaacttcct
     5401 ttctcaaaat ggaaaaacta gcgtgctttc taatccaaag cttatggctt taaataacca
     5461 acaagccatt atttctgtag gcgatactat aaattatcaa gttaaagaaa gttctaaagg
     5521 cactgaaaat gggactactg ttagtgaaag ttataataat tattctattt ttgtaggcat
     5581 tttactcaat atcttgcctg aaatttctga tgatggaaaa ataatgctta ggattaatcc
     5641 aagcttaagt gattttaagt atccagaaga taataaacga caaaaagaac caagaactat
     5701 tgctcctgat accatacaaa aaaagctttc tagtgttgtg caagtagaga ataatcaaac
     5761 tttaatttta ggcggattga tttctcacga taaatctaat gagaaaaatt ctatcaattt
     5821 tctatcaaaa attccaatcc taggttcttt gtttaaagga gaagttttaa attctaaagt
     5881 aaccgaaatt gtttttatta tcactccaag tatagtagat agtgtaaacg ctccaagtct
     5941 taaagatcta ggatttaagc attatgagta aaattattcc atttagagaa gaaatttttc
     6001 atcaaatcaa tcaaatttta gaaagccaaa aagcttttat ttttttatgg ggaaaaagtg
     6061 gtagtggtaa aagtgtattg ttgcaaagat tggcaaaaaa atataatgtt gattttatta
     6121 atgaaaattt taaagatcag agtttcttaa aagaaaaaat tgagtttttg atttcacaag
     6181 gtcagagttt aatcattctt gatgaagtag gaatgtatga ttatgcaatg ctagaaagca
     6241 ttaggattta tagtgattct ataagttttg ttttaagttc tcataaaaag ttaaatatac
     6301 ttaaaaaaga gcattttaaa agtcgtttaa gtgcttgttt tgaattgaaa aatattagtc
     6361 ttttagagct tgatgattat attaaattga aattcggaat gaatttttca aataaatgtc
     6421 ttaagttttt acaaaaaatt tctcaaggaa atttaagata tattgataaa actttaaaaa
     6481 gtttttatga gataaatagt ttttttgata aaaataaaag tcaagagtat attttaaagc
     6541 ttagtgcttt agagaatggc ttattaaggt aagatatgca agaaagaatt aaagagcttg
     6601 agcttaggta taaatacttt ttacttaaaa aatatttaaa atatttattg ttagttattt
     6661 taatatcagt tatagcattt tgtttttttg tgctaatgca aaaatataat aagcaaaaaa
     6721 atatttattt gcaagctatt gaacataaaa agcatttaga gcaaaagatt cttcaagcgc
     6781 aaattttaca agaaaaaaat aagatttcta gggaaaagtt atataaagaa ctagaagaag
     6841 ttaaagcggt gcaggaaaat acacacatta gtaagataga aattgattct aaaattttaa
     6901 atatttctga tttaaaaaaa tctttttatc aaaatccaag ctatgaaaag gctttaaatt
     6961 tagctaagaa gtattttgat attaaagctt atcaaaagac aatattttgg actttaaaag
     7021 ccaatgaact tgacaagcaa aaacaagatt cttggctgat ttttgctcag gctaaaagag
     7081 ctttaggtga agaaaaagaa gctcaaagtg ctttagatgc ttatataaat tattatggtt
     7141 taatggaatt agatggaaag tagaatggat aaaatttttc aagcttatat tgataatgaa
     7201 ataagtcttg atgaaatttg cactaaattt aatatcactt cttgggattt ttttaaaaaa
     7261 ttagcaaatt tttgtaattt acattttgtt gatttagatg aagataatga ttttatttat
     7321 gaaggtatac ctttttcttt acttttaaaa tttaaatttc tgcttattaa aaacaatgac
     7381 ggctttatga ttattagatc caaaccttgt tctttagagc ttttagagca agttaagact
     7441 tttatgattt gtgaaaaaat cgacactgca attgccgatg aattaaagat agctaaaatt
     7501 ttaaatcaaa ttcgcattca agaggagatt aaaagattaa gcattaagct tagacttgaa
     7561 tggcaagaaa atcacaaaag agatgatcaa agttgcatca gtcaaatttt tgatttttta
     7621 ttacatgaaa ttttatcttt tcatgcgagt gatattcata tagaagcaag gaatgatgat
     7681 gctttgatta ggtttagggt tgatggaatt ttgcgtgaat ttgctatttt tgagaaggat
     7741 atttatgaag ctttggtttt tcatgtcaaa tttttagctt gtttgaattt agctgaatca
     7801 agaaaaacgc aagatggaag ttttgaatta gattttgaaa atgaaagata tgattttcgt
     7861 gtttcatgtt tgcctttgat ttatggcgaa agtgttgtta taagaatttt aaaacatgat
     7921 aaagaaattt tggatttgca taaactaaat cttggagata aaaatttaga aattttaaaa
     7981 aagattttac atcgtcccaa tggaatgatt ttattaaccg gtcctacagg tagtggtaaa
     8041 agcacaactt tatacgcgtg tttaaatgaa ttgaaaagta ttgaaaaaaa gattatctcc
     8101 gcagaagatc ctatagaata taaaattcct ttagtgcagc aaattttgct taattcaaaa
     8161 gttggagtcg agtttaatag tgttttaaga gcaattttaa ggcaagatcc tgatattatc
     8221 atgataggag aaattcgcga tgaagaaagt ttagatattg cacttaaagc ttctttaaca
     8281 ggtcatttgc ttttaagcac cttgcatact aatgatgctc ttagtaccat tgataggctt
     8341 ttggatatgc aagcaaaaag ttacttgata gcatcggctt tgagtcttgt tatagcacag
     8401 cgtttggtta gaaaactttg tccttggtgt aagcaaaaaa gcaaaaaaca ttatattgaa
     8461 tttgaaggtg aattttttga accaaaagga tgtgagcgtt gtcatcatag tggatttttt
     8521 ggcagagaat taatcgctga atgcttagag atcaatgaag atttagcttg tgcaattagg
     8581 gaaaatcaag ataaaacgat tttaatggag cttgcaaaaa aatatggctt tcaaactatg
     8641 tttgaacaag gtttaaaaaa agccaaagaa ggtcttacaa gtatagatga gcttttaagg
     8701 gttgtaagat gaaattttat gaagtagaat ttcttaaaaa caatcaaaat tatacaaaaa
     8761 ctataaaagc tgaaaattta aatacagcac aagcaaaagc cttatcaaag aattggaaaa
     8821 tcattgatat aaaagaaatt caaaaatcta attttcagag attaaaggat gaaaatttta
     8881 tactcttttt taaagagcta gctttgttgt gtgaagttgg attaagtgtt caagaagcga
     8941 ttagagaatt atattttatg cattcttgca agattatgaa aaaaatatta gacaatttaa
     9001 ttttagctca aaatctaaat caagcttttg aaaatgctaa ttttggatta aatcgtgcgg
     9061 agttagcttt gattaaaacg gctgaaaaga caggaaaaat cagtgaagtg tttagtcaaa
     9121 tttctaaact tcgagaaaaa aacttagaga gtcaaaaaca attaaaaaag gcttttagat
     9181 atcctacttt ggttttttta agtattatcg gagcattttt gtttttaatg ctttttgtag
     9241 tgcctaattt taaagattta tttgaaaatt taggcgcgag tttgcctttt atcacgcatg
     9301 taatgttaga aatttataat tttttagatg actatggaat tttttgcata tttttgtttg
     9361 ttatttttat tgttatgctt attttagctt ataaaaattt tcattctttt gctttttctt
     9421 gcgatttttt atttttaaaa gtacctttga tttctc
//
LOCUS       DARBAC010000065         9235 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.065, whole genome shotgun sequence.
ACCESSION   DARBAC010000065 DARBAC010000000
VERSION     DARBAC010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9235
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.065"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            39..2009
                     /locus_tag="SB799_001177"
     CDS             39..2009
                     /locus_tag="SB799_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HEG0868415.1"
                     /translation="MKKLISKGKVLTLLLGVGFALNVSSAENSNVLIQGEAAQDGDTK
                     PRTLEGYVHQEDAFFKYLKEHHPMFKYEKEGRIVGKYAISDREEEYVEFSNGPTFAQQ
                     NNLAHTSVTYRLGMESFLDFPNKFVGPKKCGECHPAQYKAWERSRHAKTVRFPDEFEE
                     VGNDLKKPMYNSQSTILPDGIYPDDVYAVIGTPRTKYGFIDRWLVRGTYHVEDGNLSN
                     MTGKIVAGGNQFSRLWSEFLTPEMTKKIAEFSPGFPTTMEQFGGNGSQVWGTNSYAAQ
                     YRKNMLFQPASSYCETCHSFKFDFKSKEEFYKALGNTQELRKHTISKGISCEECHGAG
                     AHLYGARGAGMPSNCERCHQRFSYNEEDAKKNPRKPFNAFFKSSCPACGTEGAQMYSS
                     AHYDKGMRCSTCHDPHEVTFNDWKDGYTKVGLKKTCTDCHDTQASFFKQGGIHSKDNC
                     TACHMPNMMSCENFGAVQNPDKGGFDNVRASHIWKIKVDKTAKTLNPPEGKERSPKTS
                     GWTIARDDDGRFFLDLMWACGRTSFSDPNLMGPGASGCHSAVQSNLPKKLHFTDQETI
                     YDIVVGWQKPVKDGYENILKGVKEIDKAMAENPKLSVEKKSRVITLANQARAIAEKLQ
                     KDGSWGVHGPVYSKKIVDEALVYIQEAKNILK"
     gene            2050..4119
                     /locus_tag="SB799_001178"
     CDS             2050..4119
                     /locus_tag="SB799_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868416.1"
                     /translation="MKQSLIKFILLAVFCFSTPFLLADGKIQIGIVEGVTPISMKDAE
                     KLLGQKNVYFVDVNSKEEREVAGNIPNAVLVDAQNWQNLLPDDFNATLIFYGSNRFTF
                     DASNIANLSQKLGYTHVYVMLDGIESWVLSGRKVQKEQIEKWQNAKNLDDFKDSIHSR
                     MYFGDVPSCRDCHGKGEDKKSIRYNNAANLDLINKNCASCHKDVDKEFKHSIHQNISQ
                     IQLDKDGKKKKIPTCTTCHDIHNNDPLMNAMTLKQRSDFKCGECHQDKQDRYHDTFHG
                     KAMVLNSPGSAPKIAACYDCHGKHNILKVEDLNSTLSSLNRVQTCAQCHPNSNENFAN
                     FIAHADHSDGENYPLLHGAYIFMTALVIGVFVFFGLHTLLWSIRLILARLSHPIEWKK
                     AKENAHNDKILIKRFSTFHKIQHFFMAASFLGLAFSGLPQKFYTAPWAQTMIDLMGGP
                     IGATIVHHISAIVMFIVFFSHIGEIILVNWKRRDLVRDPQTGKLDKMKILKALFGPDS
                     LMPNWQDFKDMKAHFKWFFGMGERPQFDRWTYWEKFDYLAVFWGMFVIGLSGLVLWFP
                     TFFSAFLPGWMINLCSLVHSDEALLATGFIFAIHFFNTHFRADRFPMDMVIFSGTQSE
                     AEIKQERNAYYQRLKESGRLESLYEKNSKFNSYKGIAKLAGYLMLITGMIFLFLMIYA
                     FIVDLLK"
     gene            4163..4747
                     /locus_tag="SB799_001179"
     CDS             4163..4747
                     /locus_tag="SB799_001179"
                     /inference="COORDINATES: protein motif:HMM:NF024498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEG0868417.1"
                     /translation="MLKKLILGFIILLFCACNDEKIDENILSKGTKTTEQYKQDANNL
                     DLNSYKEIAEFFKDNQNIVFSDKPVLIIFSANNCVYCDKLKHEIQNDKEVQNILKNTY
                     NSYYINTSYHKIHNYDNKKTSTEELSREFNIDATPTLVFFTPKHKTLLIYPGFMSAKR
                     LALTMEILKDEKNQKLNEDELFKTLFLAYKEKNV"
     gene            4740..7445
                     /gene="ccsA"
                     /locus_tag="SB799_001180"
     CDS             4740..7445
                     /gene="ccsA"
                     /locus_tag="SB799_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEG0868418.1"
                     /translation="MFKKIFFSFWMSLILLFIYALSCAVATFVENDFGTNAAKALVYN
                     ALWFDILHLLLLINLIGIIFIHKLLQRKKYASLLLHSAFIVILLGAAITRYFGIEGGM
                     HIREGQSSDIIVTRDEFIALMLYNDEGKVVEYQSFGVAFNPLLHNSFEKKVSMQQNKT
                     INLKLLDYEKAPNAMSNPIIKMQISFNNESKEILLTPNYNNENVLPFRLGGEIFALNW
                     GPEEIKLPFSLALKDFILDRYAGSMSPSSYASDIEVIDQDKSFEYKIFMNNVLDYGGY
                     RFFQSSYDQDEQGTILSVNKDPGKIPTYIGYTLLTLGFLWILFAKNSRFQKLSNYLKN
                     QKNLLLILFCLFAFNIKSFADENTLKLIQNIKENSAKHSMLFGSLLVQDFDGRIKPID
                     TLAMNYIHKITKKNDFLGLNYNQIFLGMMMYPQHFRQIKMISVKTAKLKEILGVDKNE
                     KYLAYDDVFDGDFYKLSNYIEEANRKKPALRDQFDKDILALDEKINTAFYIYSGEIFR
                     IFPDPSQKTYTWYSPATPMPFDLKDIENIQSLLAKYFFDFEQALSTKDFSKADESLER
                     LKNFQNFYGSNLIPTPTQISLELFLNHYNIFDNLTPIYLLLGSMLFILLVYEILSLKK
                     APKMLKNAIFILIALSVLAHALALIFRWYVGDHAPWSNAYESMVYIAFACAFAGLVFY
                     KRSSLALCTASIMAGISLFVAHLGFMDPQITNLVPVLKSYWLNIHVSIITASYGFLGL
                     CFLLGVFSLILFMLRNPKKAQIDQSILNLHCINEMAMIIGLALLTIGNFLGGVWANES
                     WGRYWGWDSKETWALISIIVYTMILHLRFISKFNNPYAFASASVIGFYSILMTYFGVN
                     FYLSGLHSYATGDPVPVPKFLYFFIAFTVILILGAFFKRKLKSPA"
     gene            complement(7480..9150)
                     /gene="ggt"
                     /locus_tag="SB799_001181"
     CDS             complement(7480..9150)
                     /gene="ggt"
                     /locus_tag="SB799_001181"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEG0868419.1"
                     /translation="MRYLAIFAISITLSFGAANPPIQDRTGTGLVLSSHELANKIGKE
                     VLDKGGNAIDAAVAVGYALAVVHPAAGNIGGGGFAVIHLANGENTTLDFREMAPLKAS
                     RDMYLDSKGEIIKDASTIGYLAAGVPGTVKGMSAMLDRYGTMKLKDLMAPAIKLAEKG
                     YLINDRQEQTMLEAKDMFKEFPSSSKYFLKKDGSTYKSGDLFVQKDLAKTLKLIAKEG
                     PDAFYKGKIADLIAADMAKNKGIITKEDLAQYQAIWRKPVEGTYRGYDIISMSPPSSG
                     GAHIIEILNIMENANIENLGFASSKTLHIMAEAMRQAYADRSEYMGDPDFVKIPLDKL
                     TSKEYAKEIYAKIPKDKALPSSKVKPGLGQIHEGHNTTHYSVLDSKGNAVSITYTINA
                     SYGSGATVEGAGFLLNDEMDDFSIKPGVPNLYGLVGGEANAIEPKKRPLSSMSPTIIL
                     KDGKVFMVVGSPGGSRIITTVLQVISNVIDHKMDISTAVESPRFHMQWLPDEIRTEPF
                     GIIKDVQNNLEKMGYKITKEPYMGDVNAIMVDPKTGKIIGSMDTRKEF"
BASE COUNT         3035 a         1441 c         1569 g         3190 t
ORIGIN      
        1 tatattatct taaaaatttt atttataagg tgtatcttat gaaaaagctt atttctaagg
       61 gaaaggtttt aaccctatta cttggggtgg gatttgcttt aaatgtgagt agtgcagaaa
      121 attcaaatgt tcttattcaa ggagaagctg cacaagatgg cgatactaaa ccaagaacgc
      181 ttgagggtta tgtgcaccaa gaagatgcgt tttttaaata tcttaaagaa catcatccta
      241 tgtttaaata tgaaaaagaa ggtcgtatag taggtaaata tgctattagt gatagggaag
      301 aagaatatgt agaattttct aatggtccta cttttgcaca gcaaaacaat ctagctcata
      361 cttcagtgac ttatcgttta ggaatggaat cttttttaga ttttccaaat aaatttgtag
      421 gtccaaaaaa atgtggtgaa tgtcatcctg ctcaatataa agcttgggaa agatcacgtc
      481 atgcaaaaac cgttcgtttt cctgatgagt ttgaagaagt aggaaatgat ttaaaaaaac
      541 ctatgtataa ctcacaatct actattttac cagatggaat ttatcctgat gatgtctatg
      601 ctgtaattgg aacacctaga acaaaatatg gttttattga tagatggttg gttcgtggaa
      661 cttatcatgt tgaagatgga aatcttagta atatgacagg aaaaattgta gctggcggca
      721 atcaattctc aaggctttgg agtgagtttt taacacctga aatgaccaaa aaaatagcag
      781 aattttctcc aggtttccct actactatgg aacaatttgg aggtaatggc tctcaagttt
      841 ggggaacaaa ttcttatgca gcacaatatc gtaaaaatat gctttttcag cctgcaagtt
      901 cttattgcga aacctgtcat agttttaaat ttgattttaa aagcaaagaa gaattttata
      961 aagctttagg aaatactcaa gagcttagaa aacatacaat ttcaaaaggt atttcttgtg
     1021 aagaatgtca tggtgcaggt gctcatcttt atggtgctag aggtgcaggt atgccatcaa
     1081 actgcgaaag atgtcatcaa agattttctt ataatgaaga agatgctaag aaaaatccta
     1141 gaaaaccatt taatgccttc ttcaaatcta gctgtccagc ttgtggaact gaaggtgcgc
     1201 aaatgtatag ttcagctcac tatgataagg gtatgagatg ttctacttgc cacgatcctc
     1261 atgaggttac tttcaatgat tggaaagatg gatatactaa agtagggctt aaaaaaactt
     1321 gtacagattg tcatgacaca caagctagct tctttaaaca aggaggaatt cattcaaaag
     1381 ataattgtac agcttgtcac atgccaaata tgatgagttg tgaaaacttt ggagcagttc
     1441 aaaatcccga taaaggtgga tttgataatg ttagagcttc tcacatttgg aaaataaaag
     1501 ttgataaaac tgctaaaact cttaatccgc cagaaggtaa agaaagatct ccaaaaactt
     1561 caggatggac catcgctaga gatgatgatg gaagattttt ccttgattta atgtgggctt
     1621 gtggacgtac aagttttagt gatccaaatt taatggggcc aggtgcaagt ggatgtcaca
     1681 gtgcggttca gtcaaattta cctaaaaaac ttcattttac agatcaagag actatctacg
     1741 acattgttgt aggttggcaa aaacctgtaa aagatggata tgaaaatatt cttaaaggcg
     1801 tgaaagaaat tgataaagct atggctgaaa atcctaaact ttctgtagag aaaaaatctc
     1861 gtgttattac tttggcaaat caagcaaggg ctattgcaga aaaattgcaa aaagatggtt
     1921 cttggggtgt gcatggtccc gtttactcca aaaaaatagt agatgaggct ttggtttata
     1981 tacaagaagc taaaaatatt ttaaaataaa attttcgccc attttttggg cgagtttaag
     2041 gagtaaattt tgaaacaaag tttaataaaa tttatattgc ttgctgtttt ttgtttttca
     2101 accccttttt tacttgccga cggaaaaatt caaataggta tagttgaagg tgtaactcct
     2161 atcagcatga aagatgctga aaaactttta gggcaaaaaa atgtatattt tgtggatgtt
     2221 aattccaagg aagaaagaga agttgcaggt aatataccta atgctgtttt agttgatgcg
     2281 caaaattggc aaaatttatt acctgatgat tttaatgcaa ctttaatttt ttatgggtcg
     2341 aatcgtttta cttttgatgc ttctaatatt gcaaatttaa gccaaaaatt aggctatacc
     2401 catgtttatg ttatgttaga tggtatagaa tcttgggtgc tttctggaag aaaagttcaa
     2461 aaagaacaaa tagaaaaatg gcaaaacgct aaaaatttag atgattttaa agatagcatt
     2521 cattcaagaa tgtattttgg agatgttcca agttgtaggg attgccacgg aaaaggcgaa
     2581 gataaaaaat ctattcgcta caataatgct gcaaatttag atcttatcaa taaaaactgc
     2641 gcaagttgtc ataaagatgt agataaagaa tttaaacaca gcattcatca aaatatcagc
     2701 caaatacaac ttgataaaga tggaaaaaag aaaaaaattc caacttgtac tacttgtcat
     2761 gatatccaca acaacgatcc gttaatgaat gcaatgacct taaaacaaag aagtgatttt
     2821 aaatgcggtg aatgtcatca agataaacaa gatcgctatc atgatacttt tcatggtaag
     2881 gctatggtat taaatagtcc tggtagtgct ccaaaaatcg cagcctgtta tgattgtcac
     2941 ggcaaacaca atattttaaa agttgaagat ttaaactcaa ccctatcgtc tttaaatcgt
     3001 gttcaaactt gtgcacaatg tcatccaaat tctaatgaaa attttgccaa ttttattgca
     3061 catgctgatc atagtgatgg agaaaactat cctttacttc acggtgctta tatctttatg
     3121 accgctttag tgataggagt ttttgtattc tttggtttgc atactttact ttggagtata
     3181 agactgattt tagcaagact ttcacatcct atagaatgga aaaaagcaaa agaaaatgca
     3241 cacaatgaca agattttaat caaacgtttt tcaaccttcc ataaaattca gcatttcttt
     3301 atggcggcaa gtttcttagg gttagctttc tcaggtttgc cacaaaaatt ttataccgct
     3361 ccttgggcac aaaccatgat agatcttatg ggcggaccaa tcggtgcaac catagtgcat
     3421 catattagtg ctattgttat gtttatagtc tttttctctc atattggaga aatcatactt
     3481 gtaaactgga aaagaagaga tttagtgcgt gatccacaaa caggaaaact tgataaaatg
     3541 aaaattttaa aagccctttt tggacctgat tctttaatgc caaattggca ggactttaaa
     3601 gatatgaaag cacattttaa atggttcttt ggcatgggtg aaagaccaca atttgaccgc
     3661 tggacttatt gggaaaaatt tgactatcta gcagtatttt ggggtatgtt tgttatagga
     3721 ctttcaggat tggttttatg gttccctact ttctttagtg cctttttacc aggttggatg
     3781 atcaatcttt gttctttagt gcactctgat gaagctttac ttgcaacagg atttatcttt
     3841 gcaatccact tcttcaatac tcattttaga gcagatcgct tccctatgga tatggtaatt
     3901 ttctcaggaa cccaaagtga agccgagatt aaacaagaaa gaaatgcgta ttatcaacgc
     3961 ctaaaagaaa gcggaaggct tgaaagttta tatgagaaaa actctaaatt taattcttat
     4021 aaaggcattg ctaaattagc aggttatttg atgctgatta caggaatgat ctttttattc
     4081 ttgatgattt atgcttttat agtggattta ttaaaataat aattgcctag attttctagg
     4141 caattttaaa tgaaaggatt tgatgttaaa aaaactgatt ttaggattta taatattgtt
     4201 attttgtgct tgtaatgatg aaaaaataga tgaaaatatt ctttctaaag gaacaaaaac
     4261 tacagaacaa tacaaacaag atgcaaacaa tcttgatctc aactcttaca aagaaatcgc
     4321 agaatttttt aaagacaatc aaaatattgt tttttctgac aaacctgtgc taattatttt
     4381 tagtgcaaat aattgtgttt attgcgataa attaaaacac gaaattcaaa atgacaaaga
     4441 agttcaaaat atcttaaaaa acacatataa ttcttattat atcaatacaa gttatcataa
     4501 aattcataat tacgacaata aaaaaacaag cacagaagaa ctttcaagag aatttaatat
     4561 agacgctacg cctactttgg tatttttcac tcctaaacat aaaactttac tgatttatcc
     4621 tggttttatg agtgctaaac gccttgcttt gactatggaa attttaaaag atgaaaaaaa
     4681 tcaaaagctt aatgaagatg agctttttaa aacacttttt ctagcataca aggaaaaaaa
     4741 tgtttaagaa aatctttttt tccttttgga tgagtcttat tttgcttttt atctatgcgc
     4801 tttcttgtgc agtagcgact tttgtcgaaa atgattttgg cacaaatgct gctaaagcct
     4861 tagtttataa tgctttatgg tttgatatct tacacctttt gcttttaatc aatcttatag
     4921 gtattatttt tatacacaaa cttttacaaa gaaaaaaata tgcttccttg ctcttgcata
     4981 gtgcttttat agtaatttta cttggcgctg caatcacgcg ttattttggc atagaaggag
     5041 gtatgcacat tagagaagga caaagttctg atatcattgt gacaagagat gaatttatag
     5101 ccttaatgct ttataatgat gaaggtaagg ttgtagaata tcaatccttt ggagtagctt
     5161 ttaatccttt actccataat agttttgaaa aaaaagtttc catgcagcaa aataaaacta
     5221 taaatttaaa actacttgat tatgaaaaag ctcctaatgc aatgagcaat cctatcatca
     5281 aaatgcaaat ttcttttaat aatgaaagca aagaaatttt actcactcca aattacaaca
     5341 atgaaaatgt tttacctttt agattaggag gtgaaatttt tgcactcaac tggggtcctg
     5401 aagagattaa actgcctttt tctttggctt taaaagattt tatccttgat cgctacgcag
     5461 gttctatgag tccttcttct tatgcttcag atatcgaagt gatcgatcaa gataaaagtt
     5521 ttgagtataa aatttttatg aataatgttt tagattatgg cggatataga ttttttcaaa
     5581 gttcttatga tcaagacgaa caaggcacca tactttcagt caataaagat cctggaaaaa
     5641 ttccaaccta tataggctat actttgctga ctttaggttt tttatggatt ttatttgcta
     5701 aaaactcaag atttcaaaaa ttatcaaact atcttaaaaa tcaaaaaaat cttttattaa
     5761 ttcttttttg tctttttgct tttaacataa aaagttttgc cgatgaaaac accttaaagc
     5821 ttatacaaaa tatcaaagaa aattctgcaa aacattctat gctttttgga agcttacttg
     5881 tgcaagactt tgatggcagg ataaaaccta tcgatacttt agcgatgaat tacatccata
     5941 aaattaccaa aaaaaatgat tttttaggtt taaactataa tcaaattttt cttggtatga
     6001 tgatgtatcc acaacatttt agacaaataa aaatgattag cgtaaaaact gcaaagctaa
     6061 aagaaatttt aggcgtggat aaaaatgaaa aatatcttgc ttacgatgat gtttttgatg
     6121 gagattttta caaactttca aactatatag aagaagcaaa tcgcaaaaaa cctgctctaa
     6181 gagatcagtt tgataaagat attttagctc ttgatgaaaa aatcaacacc gctttttata
     6241 tctatagcgg agaaattttt agaatatttc ctgatccaag ccaaaaaacc tatacttggt
     6301 attctcctgc tacacctatg ccttttgatt taaaggatat agaaaatata caaagcttat
     6361 tggcaaaata tttttttgat tttgaacaag ctcttagtac caaagatttt tctaaagccg
     6421 atgaaagttt agaaagactt aaaaatttcc aaaattttta tggatcaaat cttatcccta
     6481 cacctactca aatttcttta gagctttttt taaatcatta taatattttt gacaatctca
     6541 cccctattta tcttttacta ggtagtatgc tttttatctt attagtctat gaaattttaa
     6601 gccttaaaaa agctccaaaa atgcttaaaa atgccatttt tattctcatt gctttaagtg
     6661 ttttggctca tgctttagct ttaatctttc gttggtatgt aggagatcac gctccttgga
     6721 gtaatgctta tgaaagtatg gtttatatag cttttgcttg tgcttttgcg ggacttgttt
     6781 tttataaaag atcttcttta gcactttgta ctgcaagtat tatggctgga atttctcttt
     6841 ttgtagcaca tcttggtttt atggatccac aaattacaaa tcttgtgccc gttttaaaat
     6901 cctattggct taatatccat gtttctatca tcactgcaag ctatggattt ttaggacttt
     6961 gctttttgct tggagtattt agcttgattt tatttatgtt aagaaatcca aaaaaagctc
     7021 aaatagatca aagtatttta aacttacatt gtatcaacga aatggcgatg ataataggac
     7081 ttgctttact cactatagga aatttcttag gtggagtttg ggcaaacgaa agctggggaa
     7141 gatactgggg ttgggattct aaagaaactt gggctttaat ttctattatt gtttatacta
     7201 tgattttaca tcttagattt atctcaaaat ttaacaatcc ttacgccttt gcaagtgcga
     7261 gtgttatagg attttattct attttgatga cttattttgg ggtaaatttc tatctttcag
     7321 gattgcattc ttatgcaaca ggagatcctg tgcctgtgcc taaattttta tattttttca
     7381 ttgcttttac agtgatttta attttaggag cattttttaa aagaaaactt aaaagtcctg
     7441 cataaattta cccttgaaat ttcaagggta aataagaagt tagaattctt ttcttgtatc
     7501 catagagcct atgatttttc cagtttttgg atcgaccatg atagcattta catcacccat
     7561 ataaggttct tttgtgattt tatagcccat tttttcaaga ttgttttgca catctttgat
     7621 gattccaaaa ggctctgttc tgatttcatc aggtagccac tgcatgtgaa atcttggaga
     7681 ttctaccgct gttgatatat ccattttatg atcgatcaca tttgaaatca cttgtaaaac
     7741 tgtcgtgatg atcctagaac cacctggact acctactacc ataaatactt ttccatcttt
     7801 tagtatgata gttggactca tagagcttaa aggtcttttt ttaggttcta tagcattagc
     7861 ttctccgcct acaagtccgt ataaatttgg cacgcctggt ttgattgaaa aatcatccat
     7921 ttcatcattg agtaaaaacc ctgccccttc aaccgtagca cctgaaccat aactcgcatt
     7981 gatcgtatag gtaatgctta cagcattgcc tttgctatct agtacagaat aatgagtggt
     8041 attatgtcct tcgtgaattt gtcctaaacc aggttttact tttgagcttg gtaaagcctt
     8101 atcttttgga atttttgcat aaatttcttt agcgtattct ttgcttgtaa gtttatcaag
     8161 tgggattttt acaaaatcag gatcgcccat gtattctgat ctatccgcat aagcttgacg
     8221 catagcttca gccattatgt gtaaagtttt agagcttgca aagcctaaat tttctatatt
     8281 ggcattttcc atgatattta aaatttcgat gatatgagca cccccactgc taggtggcga
     8341 catggaaatg atatcataac ccctataagt gccttctaca ggttttctcc aaatagcttg
     8401 gtattgtgct agatcttctt tagtgataat gcctttgttt ttagccatat ccgctgctat
     8461 taaatcagcg atttttccct tataaaaagc atcaggacct tcctttgcga taagttttaa
     8521 agtttttgct agatcttttt ggacaaataa atccccgctt ttataagtgc taccatcttt
     8581 tttaaggaaa tatttgcttg aactaggaaa ttctttaaac atatctttag cttctagcat
     8641 ggtttgttct tgtctatcat tgatgagata acctttttca gctagtttta tagcaggagc
     8701 catcaagtct tttagtttca tagtgccgta gcgatcaagc atagcactca tacctttaac
     8761 cgttcctggt actccagcag ctagataacc tatagttgaa gcatctttta taatttctcc
     8821 tttgctatca agatacatat ctctgcttgc ttttaaaggt gccatttctc taaaatcaag
     8881 cgtggtattt tctccattgg ctagatgaat gactgcaaag ccaccaccac ctatgtttcc
     8941 tgctgcagga tgcactacag ccaaagcata acctactgct acagctgcat ctatggcatt
     9001 tccgcctttg tcaagaactt ctttgcctat tttattggct agttcatgac ttgataaaac
     9061 aagtcctgtg cccgttctat cttgtatagg tggattagct gcaccaaaac ttagcgtgat
     9121 tgaaatcgca aatatagcta aataacgcat tttactcctt tttaatgata tatagaatta
     9181 ttgtaacaaa actaggggta ttgataaatt taaaaaatga tatattttta taaaa
//
LOCUS       DARBAC010000066         9199 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.066, whole genome shotgun sequence.
ACCESSION   DARBAC010000066 DARBAC010000000
VERSION     DARBAC010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9199
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.066"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..565
                     /locus_tag="SB799_001182"
     CDS             <1..565
                     /locus_tag="SB799_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868420.1"
                     /translation="PDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAW
                     SVLKELDKMDENFNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCS
                     EFDELWMIDEKSYLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLD
                     KQSKPSINILDELIKQIAAVNEQHNES"
     gene            531..1715
                     /locus_tag="SB799_001183"
     CDS             531..1715
                     /locus_tag="SB799_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEG0868421.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSVFERRMNI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPVALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPCFLKHNLKLALKACEILTSQEKTLEALKKLQGLNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGIQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            1702..2604
                     /locus_tag="SB799_001184"
     CDS             1702..2604
                     /locus_tag="SB799_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0868422.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVSKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            2541..2936
                     /locus_tag="SB799_001185"
     CDS             2541..2936
                     /locus_tag="SB799_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEG0868423.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGYFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            2936..5872
                     /locus_tag="SB799_001186"
     CDS             2936..5872
                     /locus_tag="SB799_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEG0868424.1"
                     /translation="MQASFYEYLQNPKICELLLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFNLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDTLIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDVSFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIYFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLSRQADFITSAGFIYTSDQEKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKVQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSVLAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKL
                     DIYTKQFLSLIIIKILALNKFKSISNYGQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            5874..6635
                     /locus_tag="SB799_001187"
     CDS             5874..6635
                     /locus_tag="SB799_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868425.1"
                     /translation="MDWNKTYAAIYRARKDYLKPIFEIDPITLKDLVGMESQKKALYE
                     NTLNFIQDKGANHALLWGSKGTGKSSLIKAIFNEFKDQGLRLVELNKEDLFALVDIID
                     EIRLENFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     IADNLDTQIAHTELHLSDAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKENFK"
     gene            6632..7318
                     /locus_tag="SB799_001188"
     CDS             6632..7318
                     /locus_tag="SB799_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEG0868426.1"
                     /translation="MTGVQIFTKLLNLDLNYYDFDWLENQGLSEFELLISVILTQNTN
                     WKNVLKALENLKKENITSLEQINTLSNLELATLIKPSGFYNTKAKRLKGLVESIINTY
                     ENLENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDSYSLRLAFHLGYEFEN
                     YEELREFFQSGIEGEQENLCKILGRKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEDL"
     gene            7315..8127
                     /gene="thiD"
                     /locus_tag="SB799_001189"
     CDS             7315..8127
                     /gene="thiD"
                     /locus_tag="SB799_001189"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEG0868427.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVL
                     SVVAENTSRVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNVVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGAKAVLLKGGHSETNANDVLYNGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            8117..8749
                     /gene="thiE"
                     /locus_tag="SB799_001190"
     CDS             8117..8749
                     /gene="thiE"
                     /locus_tag="SB799_001190"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEG0868428.1"
                     /translation="MKNKLDLSLYLVASQGNKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKAYKIPFLINDRVDIALALDADGVHLGQEDLEVKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGANYLGCGAIKVTPTKESSLLSLELLSQICDKSPIGVVA
                     IGGVDKAVLDELKGINLSGVAVVRAIMDAKDAFLAAKELKCKIYENLPLK"
     gene            8727..>9199
                     /locus_tag="SB799_001191"
     CDS             8727..>9199
                     /locus_tag="SB799_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEG0868429.1"
                     /translation="MKIYLLNETPFKGVENLILNEIVFYDFSIDLSLYDALICTSKNA
                     LKALQHAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKTQ
                     KCLYLRAKNIVSTLNLDLKNAGMDLDEVIVYENVFKKGNKKLTHPAIFIFTSPLSV"
BASE COUNT         3397 a         1047 c         1704 g         3051 t
ORIGIN      
        1 accagatgaa aatggggaag taaaacttag ttttgaggat ttaaaactaa aatttaaaca
       61 acttggagaa aaaattacat ctttaaataa tcaaattgaa ttcacgcaaa gcttggagga
      121 gagagaggct tggagtgttc ttaaagagct tgataaaatg gatgaaaatt ttaataagta
      181 taaagttaat tattctttag ctttattttc tatagtaaat taccgtttca ttatggaaaa
      241 atacggcatg ggaagtttga atgaaatttt tgttcgattt aaaaaaattt taaaagattc
      301 ttgtagcgaa tttgatgaac tgtggatgat agatgaaaag agttatttga ttgtttcgcc
      361 aggaaaaagc aaagatgaaa ttacacagct tgtaaataca aatcttaaaa ctatagaaaa
      421 ttttagattt atttataagc aagatattat aactcctaaa attcacgtgg cttatcttga
      481 taagcaaagt aagccaagta ttaatatttt agatgagtta ataaagcaaa ttgcagcggt
      541 taatgaacaa cataatgaaa gttgagaatt ttttagctca aaaaagtata aattacgata
      601 aaattgatcg ttttttgatg tttagaatgt atgaaaaata taagaaatat tttaaaaata
      661 ttcctataat tcaacttata ggcacaaatg gtaaaggtag cacgggtaga tatttaaccc
      721 aacttttaga aaatttaaat tataaaatag ggcattatac tagcccgcac attttcagtt
      781 ttaatgaaag attttatctt gatggtaaga ttgcgaatga tgaagaatta gaacaagctc
      841 atataagact tgaagaaatt tttaaacaag acttgcaaaa attaagttat ttcgaatatg
      901 ctactttttt agctatgatt ttatttcaaa aatgcgattt cattgtttta gaagcaggag
      961 tgggtggaga atatgatgct acttctgttt ttgaaagaag aatgaatatt tttacaagaa
     1021 ttggatttga ccatattcaa attttgggca attctttaga agatattgca agaaccaagc
     1081 ttaaagttat ggcgcctgta gcacttataa gtgatgagca agagcaaaat gttttaaatt
     1141 tagcaaaaaa aattgctttt ttaaaaaaag ctaatttgca agtttcttcc ttaaatcctt
     1201 ttttgaaaga aaaatttgag atttattgta aaaagtttgt tttaccttgt tttttaaagc
     1261 ataatttaaa gcttgcatta aaggcttgtg aaattttaac ttcgcaagaa aaaaccttag
     1321 aagctttaaa aaagttacaa gggttaaatt tacaaggaag atgccaagaa atttctccaa
     1381 atttttttgt tgatgtgggt cataatccca tggctgctaa ggctatgctt gataaatttc
     1441 aaggagagaa aataaatctt atttataatg cttatttgga taaggatatt tttcaaattt
     1501 taaatacatt aaagcctatt attgatacaa tacaaatata taaatataaa agtgcagaac
     1561 gaaagctggc tgatgatgaa atttatagta ttgcatcaaa gctaggcata caatgcaaag
     1621 aatttgtaaa attagaagag aataaaaaaa atctagtttt tggttctttt atgctggtag
     1681 aaaatttttt aaaggagtgg tgtggtaaaa aataaattca ctattaccat tacagatatt
     1741 aacggttcaa gacattttta tttaaatcaa ataatcaaaa aaatagtttt ttatactatt
     1801 gcttttattg ttttattttt agtttttagt ggtttttata tcaaatatct cgatagcaaa
     1861 cttagcgata tcagtgaaaa gcgtgaggag cttttgaaaa aaagcaaaga attggaatta
     1921 tctaattcgc aaatgcaaaa aagcatagaa gaaaaaactc agcagtatgc agctatagaa
     1981 gataaaatag cttcttttga agaggctttg ggcttagaag cagaaaataa tcttacaatt
     2041 agtgcaagac ttgataatct tcagcttacc aatgagcagc aacttggaat tttgggacaa
     2101 attcctaatg gatggcctat tgaaaataaa ggcattacag gaaattttgg ctggagagag
     2161 catccgcttt taaaaagaag ggaatttcat cctggtattg atttaagagc agaaattggt
     2221 actcctattt atgcaccagc aagtggagta gtggaatttt caggttatag tgataatggc
     2281 tatggctata atgtaatttt attgcataat tttggtttta aaacagtatt tgctcatatg
     2341 atgcgcaaag aagtagtcaa agcaggtcaa tttgttagca aggggcagtt gataggttat
     2401 agtggcaata caggtctttc tacggggccg catttgcact atgaggtaag gtttattaat
     2461 aaaactttag aacctttgta ttttttaaat ttgcaaagaa aaaatatgaa tgattttttt
     2521 aatcaagaaa ggagagttcc atggcaatct ttaataaagg cggtatcagc ccaacatcca
     2581 gctctagctc agaaacaaca gtaatttctt caggtgcgag aattgagggt aaattttatt
     2641 ttgcttctat gcttcatgtt gatggagagt taagtggtat tattcattct gaaagcattg
     2701 tagttatcgg aaaaaatgga aatttaaaag gtgaattaca agcagataaa attgtagtaa
     2761 atgggtattt tgaagggcaa cttgaggcca atagtttaga aattttagcg ggcggagttg
     2821 ttaatggcga tatttcaacg caaaaaattt ctatagaaaa tggcggtcgc tttaatggaa
     2881 ctagtaaaat taaagaagat actatcaaac ttattgaaaa taacaacgaa gaataatgca
     2941 agcttcattt tatgaatacc tacaaaatcc aaaaatttgt gaacttttgc tttgtaaaga
     3001 tgaaaaacaa gcagatttac ttgctcaagt ttcacgattt aaggggttaa aaacctttgt
     3061 tttacctgat tttagagcgc agtttggaga tgatttaagg gctttttcca aagaactttt
     3121 tgatctttgc aagattttaa atgcttatca taaagaagaa gaaaaaaaaa tccttatttc
     3181 tcctttaaat actgttttaa aaaaacttcc ttcaaaaaaa catttgcaaa attatcatat
     3241 cgataaaaaa caaaatttta atttgaaatg ttttgaagat gaaatttcaa gattgggata
     3301 cgaatttgta gatatagttc aggataaagg tgaaatttca attcgtgcgg atattattga
     3361 tattttttgt atcaatgaag aaaatcctat tagaattttg ctttttggcg aagagattga
     3421 aagtataaga tattttgatt tgcaaagtca aaagtctatt cctaacgaac tagaacattt
     3481 tgaaatttgt ccttttttaa aatattttga caaagaaaat tatgaaattt ttaaggacaa
     3541 attagaagat tttcaaagtg atactttaat acatgatatc aattctttag ggttttggtg
     3601 tattgatgat ttttttgatt atttagaact tgatttttta gcttgtgaaa agtttgatat
     3661 taacgaatat gaaaaagatg taagttttgt gaatgcaaaa attttacctc aagctaaaaa
     3721 atttaaagaa ttgcaaagtt cttacaataa agattttttt gaatttcata aaaataaaaa
     3781 aatcacactt ttagctaaaa acgaagcttt atttaaagct ttagagcttg aagatactca
     3841 aaatatctat tttgtaaaaa gtgatttaag gcttaatctt attagtcctg aagagctaat
     3901 catttcttta aatcaaaaag aaaaacaaaa aacaagaaaa aaagctagtt tgattataga
     3961 tgagcttaaa aatggggatt atatagtaca cgaagattac ggagtgggta aatttttagg
     4021 tcttgagatg atagtgataa gcggagcaaa aaaagagttt gttgctatag agtaccaaaa
     4081 ttctgataag cttttattac cagtggaaaa tctttattta attgataaat atttgggcgt
     4141 gagtggatct attccaagtt tagacaaact aggtaaaaca agctttatta aacttaaaga
     4201 aaaattaaaa actaaacttt tagccatagc ttctgaaatt gttattatgg cggctaaaag
     4261 atctttagtg caagcaaaaa aaatcacagt ggatttaagt agacaagctg attttataac
     4321 tagtgcgggt tttatttata caagcgatca agagaaagct tgtcatgaaa ttttgcaaga
     4381 ttttcaaagt ggaaaagtta tggataggct tttaagcggt gatgtgggtt ttggaaaaac
     4441 agaagtcgct atgaatgcta tttatccagt agttaaaagt ggattttgtg catttttatt
     4501 tgcgcctaca actttgcttt ctcatcagca ttataaaacc ttaaaaaagc gttttgatcc
     4561 ttttgatata aaggttttta aactggatcg ctttacaagt agtgcagaaa aaaaacaagt
     4621 tttacaaaat ttaaaagaaa ataaagcttg tgtagttgta ggaactcatg cgcttttaag
     4681 tgtagaatgt gaaaatttag ctcttgttat tattgatgaa gagcataaat ttggagtgaa
     4741 gcaaaaagaa aagcttaaag aaatcactca aaattcacat attttatcca tgtcagcaac
     4801 ccctatacca agaagcttaa atcaagcttt aagttctata aaatcttata gtgttttgca
     4861 aactccacca gaagatagaa tggatgtaag aacttttgtc aaagaaaatg atgacgcact
     4921 tttaaaagaa gctatagcaa gagagttaag acgtggtggg caaatttttt atattcataa
     4981 tcatattgca agtatagagc aatgcaaaaa acatttatta gaactttttt ctactttgcg
     5041 tattttgatt ttacattcta aaatcgatgc caaggtgcaa gaagaagaaa tgttgaaatt
     5101 tgaaaacaaa gaatatgatt tgcttttaag tacctctatt gtagaaagtg ggattgattt
     5161 acctaatgca aatactatca tagtagaaaa aagcgatcgt tttggcatgg ctgatttgca
     5221 tcaattgcgt gggcgtgtag gaagaagtga taagcaaggt tattgttatt ttttaatcga
     5281 agataaaaat gctatcacaa aagatgcttt aaagcgtctt gtttctttag aaagcaattc
     5341 ttttttgggc gcaggttctg ttttggctta tcatgatctt gaaattcgtg gcggtggaaa
     5401 tttattaggc gtagatcaaa gtggacatat cgagcaaatt ggatatagtt tatatcttaa
     5461 aatgttagaa gatgaactta atgctttaag taaaaatgaa gtggatcaaa aagaaaataa
     5521 acttgattta aaactcaatg ttaatgcctt tttaaacagc gaacttatca gcgaagatcg
     5581 cttaagatta gaactttata gaagacttag caagtgtgag caagttcatg aggtttatga
     5641 gatcgaaggt gaaattgaag atcgctttgg aaaacttgac atttatacta agcaattttt
     5701 atctttgatt atcattaaaa ttttagcttt aaataaattt aaaagtatta gcaattatgg
     5761 gcaaaatatt caatttactg ctttaaatga tgaaaaagaa ctcatcaagg caaaaagcaa
     5821 agacgatgat gatattttag aggcaatttt gacgcattta agaaaggctt aaaatggatt
     5881 ggaataaaac ttatgcagca atttatagag caagaaaaga ctatttaaag cctatttttg
     5941 aaatcgatcc tatcacttta aaagatttag taggtatgga aagtcaaaaa aaagcacttt
     6001 atgaaaatac tttaaatttc attcaagata agggagcaaa tcacgcactt ttatggggat
     6061 ctaagggcac tggaaaatca agtttaatta aagctatatt taacgaattt aaagatcaag
     6121 gcttaagact tgtcgaatta aataaagaag atttatttgc cttagtagat atcatcgatg
     6181 aaatcagatt agaaaatttt aaatttatac ttttttgtga tgatttttct tttgagaaag
     6241 gagatgatag ttataaattt ttaaaacctt tactcgaggg aagcatagaa aaagccccaa
     6301 ataatgtaat tatttatgcg agttcaaatc gtaggcattt attaagtgaa agcattgctg
     6361 ataatcttga tacgcaaatt gcacatacag aacttcattt aagcgatgct gctgaagaaa
     6421 gattaagttt gagtgataga tttggtttgt ggttaagttt ttatcaggga aatttagaag
     6481 agtatttaaa gatgatagat ttttatttta aagattattc ttgtgataaa gagcttttac
     6541 acgctaaagc taaagaattt gctactctaa gagcaagcag aagtggtcgt actgcaaagc
     6601 aattttattt ggcttttaag gagaatttta aatgactgga gtgcaaattt ttaccaagct
     6661 tttaaatttg gatttaaatt attatgattt tgattggctt gaaaatcaag gattgagtga
     6721 atttgagctt ttaatttctg tgattttaac tcaaaataca aattggaaaa atgtcttaaa
     6781 agctttagaa aatttaaaaa aagaaaatat tacaagttta gaacaaatca atactttatc
     6841 caatttagaa cttgcaactt taattaagcc tagcggattt tataatacca aagccaagcg
     6901 tttaaaaggc ttagtagaaa gtatcataaa cacttatgaa aatttagaaa attttaaaac
     6961 aaatgtaagc agagaatggc ttttaaatat caaaggtttg ggttttgaaa gtgttgatgg
     7021 gatattaaat tatctttgca aaagagagat tttggttgta gatagttata gtttgcgttt
     7081 ggcttttcac ttaggctatg agtttgaaaa ttatgaagaa ttaagagaat tttttcaaag
     7141 tggtatagag ggtgagcaag aaaatttgtg taaaatttta gggagaaaat gcgaacttta
     7201 cgaactttat caaatttttc atgctttgat tgtagctttt gcaaaacaga gttttaaagg
     7261 acaaaaatta agccctaagg gtgaagaatg gatcaaaatt ttaaaggaag atttatgaaa
     7321 gcaaaaggaa gcgaacttat acctgtttta actatagcag ggagtgattg tagtggtgga
     7381 gcagggatac aagccgatct taaaaccttt agtgcgcaca atctttttgg catgagtgtg
     7441 gttttaagtg tagtagctga aaatacctca agggtgattt ctgtacacga tatacctact
     7501 caaagcgtag atgaacaaat gcttgctgtg tttgaagata tagtgccaaa ggcaactaaa
     7561 atcggaatga taggttcttg tgaattaatg agctgtgtag ctaaaaattt aagcgagttt
     7621 aaacctcaaa atgtagtgat cgatcctgta atgtttgcta aaaatggcta tgctttaatg
     7681 ccgcaagaaa attgtgattt tttcaaacaa accatagtaa aatttgcaga cattcttacg
     7741 cctaatattc ctgaagcaga gtttttatgt ggttttaaga tcgctaatga agagcagatg
     7801 ataaaagcag ctaagcattt atgcagcttg ggggctaagg cagttttgct taaaggcgga
     7861 catagtgaaa caaatgccaa tgatgtgctt tataatggaa aagaaattta tattttaaaa
     7921 ggcgaacgca tagaaactaa aaatactcac ggtacaggtt gtacgctttc ttcggctatt
     7981 gctagtaatt tagctaaagg caaggatttg tttcatgctg ttagtgaagc taaagaatat
     8041 gtaagaaatg cgatttatta ttcactcaat cttggaaaag gttgtggtcc tacaaatcat
     8101 tttttcaagt ttttagatga aaaataaatt agatcttagt ctttatttag ttgcttctca
     8161 gggaaataaa agcgaggagt gttttttaaa tactttagaa aatgctataa aaggcggagt
     8221 aagtatcata caacttcgtg aaaaagagct taatgcaaga gaattttata aactaggctt
     8281 aaaggtgcaa aaactttgca aggcttataa aatacctttt ttgattaacg atagagtgga
     8341 catagcttta gccttagatg ctgatggggt gcatttagga caggaagatt tagaagtaaa
     8401 actagctaga aagcttttag gagatgaaaa aatcataggc ttaagcctta aaaagctaga
     8461 acaacttgag ttcatacaag gagcaaatta tttaggttgt ggagccatta aggtaacacc
     8521 tactaaagaa agttcgcttt taagccttga gcttttaagt caaatttgtg ataaaagtcc
     8581 tataggggtt gtagccatag gaggggttga taaagcagtg cttgatgagt taaagggtat
     8641 aaatttaagt ggtgtagctg tggttagggc gatcatggat gctaaagatg cttttttggc
     8701 agctaaagag ctaaagtgta aaatctatga aaatttacct cttaaatgaa actcctttta
     8761 aaggggtgga aaatcttatt ttaaatgaga ttgtttttta tgattttagt atagatttga
     8821 gtttgtatga tgctttaatc tgtacttcaa aaaatgcttt aaaagcttta caacatgcaa
     8881 aaatcacttt aaatttcaaa ctcaatttat acgctgtagg acaaagtaca gctcaatacg
     8941 ctaaaaattt aggttttaaa aagattaaaa ttccatcaaa ggcttacgga aaagatcttt
     9001 ttcttgaatt taaagaggag ttaaaaacgc aaaaatgttt gtatttaagg gctaaaaata
     9061 ttgtttcaac tttaaatttg gatcttaaaa atgcaggtat ggatttagat gaagtgattg
     9121 tttatgaaaa tgtttttaaa aaaggtaaca aaaaacttac tcatcctgct atttttatat
     9181 ttacctctcc tttaagtgt
//
LOCUS       DARBAC010000067         9152 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.067, whole genome shotgun sequence.
ACCESSION   DARBAC010000067 DARBAC010000000
VERSION     DARBAC010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9152
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.067"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..745)
                     /locus_tag="SB799_001192"
     CDS             complement(<1..745)
                     /locus_tag="SB799_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEG0868430.1"
                     /translation="MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFD
                     GILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISE
                     HFLAPILFDFKAEFKNIEIHSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLE
                     INFWQDDELIVATSDKKLNEKEFYIDELLEQKWILREAGSGLRDKFLNEIGASSKKLN
                     IFLELDRMAAIKELVLQKKAISIFSKKSIE"
     gene            859..1956
                     /locus_tag="SB799_001193"
     CDS             859..1956
                     /locus_tag="SB799_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HEG0868431.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFMIALFVGMKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLIFGGYFLTLAFKGILW"
     gene            2046..2618
                     /locus_tag="SB799_001194"
     CDS             2046..2618
                     /locus_tag="SB799_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868432.1"
                     /translation="MKKILVSVLSSCLLASALSAVSFKEDSLKVSFEGYKTKDMIGTK
                     GEFKNVEYKFSKNTKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDT
                     DIKVVFQDVIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSK
                     ALKALSDVAAGHGGISWPLVDISFNADLAE"
     gene            complement(2634..3200)
                     /gene="rsmG"
                     /locus_tag="SB799_001195"
     CDS             complement(2634..3200)
                     /gene="rsmG"
                     /locus_tag="SB799_001195"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEG0868433.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNIADIGSGAGFPAVFLAFLLQNNFHLFEPNPKKAAFLRT
                     LKIECELSNLHIYKEKVQEYQNIFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRKYCILK"
     gene            complement(3201..3761)
                     /gene="ribA"
                     /locus_tag="SB799_001196"
     CDS             complement(3201..3761)
                     /gene="ribA"
                     /locus_tag="SB799_001196"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEG0868434.1"
                     /translation="MKIKISEIANLPSKWGNFQIQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLESIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMGHLK"
     gene            3818..4801
                     /gene="hemB"
                     /locus_tag="SB799_001197"
     CDS             3818..4801
                     /gene="hemB"
                     /locus_tag="SB799_001197"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEG0868435.1"
                     /translation="MFKRFRRLRLNENLRAMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDKGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKTKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGIITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            4798..5718
                     /gene="argF"
                     /locus_tag="SB799_001198"
     CDS             4798..5718
                     /gene="argF"
                     /locus_tag="SB799_001198"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEG0868436.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGTMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSEFYHPTQVLGDLLTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLIVAAILGFEFSIAIPKNYKISPEIWEFAMKQALISGAKISLSHDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYVVKALLCFLDNQRGRE"
     gene            5715..6206
                     /locus_tag="SB799_001199"
     CDS             5715..6206
                     /locus_tag="SB799_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HEG0868437.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            6193..7548
                     /gene="hemN"
                     /locus_tag="SB799_001200"
     CDS             6193..7548
                     /gene="hemN"
                     /locus_tag="SB799_001200"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEG0868438.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNTNFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILNTILDTKREVVQM
                     HFGGGTPTFFSAKQLQNLILKIRSVFGNFSKDAEISCEIDPRFLNEEQATVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQ
                     EYFKEDLKALEEYKDFINFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            7550..8815
                     /locus_tag="SB799_001201"
     CDS             7550..8815
                     /locus_tag="SB799_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEG0868439.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLAAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKIAKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKIEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFVSPLELIAKAL"
     gene            8812..>9152
                     /locus_tag="SB799_001202"
     CDS             8812..>9152
                     /locus_tag="SB799_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868440.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDTEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSM"
BASE COUNT         3157 a         1118 c         1666 g         3211 t
ORIGIN      
        1 tttctatgct ttttttggaa aaaatagaga ttgctttttt ttgtaaaaca agttctttaa
       61 tcgcagccat tctatcaagc tcaagaaaaa tattaagttt ttttgagctt gcaccaattt
      121 cgtttaaaaa tttatccctt aagcctgagc ctgcttctct taaaatccac ttttgttcca
      181 aaagttcatc gatataaaat tctttttcat tgagtttttt atcacttgta gctactataa
      241 gttcatcatc ttgccaaaaa tttatttcta aattttcata ctccactaaa gccggatcaa
      301 gttctgcttc aatgattgca aattctatat ttccgttttt tagtaaattt aaacattctt
      361 ttgaattctg cgtttgagag tgaatttcta tgtttttaaa ttctgcctta aaatcaaata
      421 aaataggagc taaaaaatgt tcagaaatgc tttgagttga ggctattttt atttccccta
      481 agagcatact ttcgtcgttt aatttttcta agctttgata gtaagcttgt ataattttta
      541 accaattttt tcctagttct aaagcttttg gtgtaggtaa gagttttttt ccaagtcttt
      601 caaataaaat accatcaaat ttattttcta aatttttaat tactattgaa acattaggtt
      661 gagttatgga aaaattgttg gctgtatgag ttggactttg agtgtttaaa agatctaaaa
      721 atatttccat atctttgatt ttcatgagtg attcctttat ttaataaaaa aaatttatta
      781 taaaaattaa aataatatat ttttataatt ttaataaaaa aaatataata acacaaaatt
      841 tacaaaaaag gaaaataaat gaaaacaagt tttttagcac atagcgtggc tatagtgcga
      901 tcaaatttta agggtttgct ttttactgct tgtatagtga tttttgctat gtatctttct
      961 agtgttcaaa gtatcaaaga tactacccat ttagcagcga ctgcctttgc tatcatcata
     1021 ggagtgttgc tttctccttg gttttttaaa taccaacatc attttcaagc tggagtgcat
     1081 tttagcgcga aaaagctttt aagactcggt attgttttat atggttttaa tatcacttta
     1141 actgagcttt taagtgtagg gttgaaaggg tttttgcttt ctgctatagt gatatttttt
     1201 gtttttatga ttgctttatt tgtaggaatg aaaattttta aactcgataa agaaacttct
     1261 atgcttgttg gagccggaag tgcgatttgc ggtgcggcag cggttttagc actagagtca
     1321 agtttgaaaa gtgatccttt taagggaatt ttagccgtag gtacggtggt gatttttgga
     1381 cttgtgttta tgttcttata tcccatagct ttttctttaa atctttttcc tttttttgat
     1441 caaaatgcta tgggggtttt tatgggagct actttgcatg aggtggcaaa tgttgcaggt
     1501 gctgctgaaa tggcaaaaga tatggcagga tttgagcaag gtgcttctaa tgttgcagtg
     1561 attataaaaa tgatgagagt gattttgctt gttccttttt tgcttatagt gacttatttt
     1621 ttcgctaaaa atcagcattc aagcagtgga aaaactgcaa aaagtatcac tataccttat
     1681 tttgcttttg catttttagg tatgatagtt ttaaatactt atctagcaag taaagaaagt
     1741 attttaggta ttgctacgag tgatattatt tctttaggta aaacactttg taccttatgt
     1801 atcgtttttg ctatggcagc tttaggcttg caaattgact ttaaaaaatt tttaaaaagt
     1861 ggctctaggg tatttggctt ggcttttgtt ttagggcttg ttttgatttt tggaggatat
     1921 tttttaacct tagcttttaa aggtatactt tggtaataaa aattattttt tagaaaattt
     1981 tattttatta atcaactaag aatataattt aattcattaa ttaaatttat taaaaaggaa
     2041 taaagatgaa aaaaattctt gtaagtgttt taagttcttg cttgttagct tcggctttaa
     2101 gtgctgtatc ttttaaagaa gatagtttaa aggtttcttt tgaaggatat aaaactaaag
     2161 atatgatagg aacaaaaggt gaatttaaaa atgtagaata taaattttct aaaaatacaa
     2221 aggatttggc aagttatctt aaaggcgcta aagctaccat aaagccaagt aatgctttta
     2281 tgggtgaagg caatgatatt ataaccaata atatcacaaa agtatttttc cctgctttat
     2341 tgggagatac ggatattaaa gttgtttttc aagatgtgat tgcgggcgaa aataaaggcg
     2401 ttatttcagc aaaaattact atggataaaa aaagtactat tgtgccttta acttatacca
     2461 tcaaagataa taaatttgaa gctaaaggac aacttgattt gcatactttt aaaaatggtt
     2521 ctaaagcatt aaaagcatta agcgatgtgg ctgcaggaca tggtggaatt tcttggcctt
     2581 tagtggatat cagttttaat gctgatttag cagaataaaa agtagcctta gggctacttt
     2641 aaaatacaat attttcttaa attattttca aaaatttcat aatcttttat attttcaagt
     2701 tcttgataaa tttcactacc tttccataaa ataaaaaccg tattttcatc ttttagattt
     2761 ttgcaaattt caagcaaagg cttgacatcc attaaggctc ttgaagtgat gatatcggct
     2821 ttaaagatat tttggtattc ttgaactttt tctttgtaaa tatgtaaatt tgaaagttcg
     2881 cattctattt ttagtgtccg caaaaaggca gcttttttgg gattgggttc gaaaagatga
     2941 aaattgtttt gcagtaaaaa agctaaaaat acagctggaa atcctgcgcc acttcctata
     3001 tcggcaatat tttttgcttt agaaaaatca taaaaatcta aaattttaat actatcaaag
     3061 atattttcat ctatattttt taaatgagta agattgtgaa tgcgattaaa tttagataat
     3121 aattctttat aaatttttac cttttcttca aagtttttta aatcgtagtt ttgcaaaaaa
     3181 tcataatctt taaaaatcat ttatttaaga tgtcccattt gagtttgttt tatgtttaaa
     3241 tactctacat taaaacgatt aggttctatt aaaatcggta tgcgtgtgat gattttttcc
     3301 ttaatggact ctagtttctc gggattattt gtgagtaaat taaccttaga aatttcatag
     3361 tgtttgagta taaattctac aatttcataa gttctctcat cggctttaaa gccaagctga
     3421 tgatttgctt taatcgtatc aaaaccttta tcttgtaaag cataagcatt aaccttgtta
     3481 aaaagcccta taccccttcc ttcttgccta agataaatca ccattccgcc attcttttct
     3541 atatatttta gtgaaaattc aagctgttcc ccacaatcac actttaaact tcctaaagca
     3601 tctcctgtta agcactctga atgaattctt agattgagtg tgtcttttgg agtattttta
     3661 aatatacata aatgttcttt atcattttct ttgaaacttt gtatttggaa atttccccat
     3721 ttgctaggca aattcgcaat ttctgaaatt tttattttca tttactactc tctataatca
     3781 aatttatgtt aagattttag caaaaaaagg acaaaaaatg tttaaaagat ttagaagatt
     3841 aaggcttaat gaaaacttaa gagccatggt aagggaaaat tctttaagtg taaatgattt
     3901 gatttatccg ctttttgtgg ttaatggaac ggggataaaa aaagaaattt cttctatgcc
     3961 tgatgtgttt caaatgagtt tagatgaaat tttaaaagag tgtcaaaatg tagttaattt
     4021 aggcattaaa gccattatac tttttggcgt tttggaaaat gagaaaaaag acagctgtgg
     4081 aagcgatgct ttagatgata aagggcttgt tgcaagaagt ataagagaga ttaagaaaaa
     4141 ttttccagat ctttttataa tcagcgatct ttgtttttgt gaatacacag atcacgggca
     4201 ttgtgggatt atcgatccaa aaacaaaaag cgtggataat gatgcaactt tagaaatttc
     4261 agccaagcaa gccttagttc atgcaagagc aggggtagat atgatagcac ctagtggaat
     4321 gatggatggt attatcacta ctttgcgcaa agctttagat aaggaaggtt ttgaaaattt
     4381 gcctataatg gcgtattcta ctaaatttgc ttcaagttat tatggtccat ttcgagatgt
     4441 agcagaatca gctccaagtt atggagatag aaaaagctat caaatggatt ttgctaatgg
     4501 taaagaagct ttagaagaaa gcttagaaga tgaagcgcaa ggagctgata ttttgatggt
     4561 aaaacccgct cttgcttatc ttgatgtggt taaagaaata tcccttcatt ctaacttgcc
     4621 tttgtgtgtt tataatgtaa gcggagagta tgctatgtta aaggcagcta aaaatgctgg
     4681 agtgattgat tatgaaaaag ttttatatga aactatgata gcttttaaaa gagcaggagc
     4741 aaagcttatc atcacttatc atgccaaaga attagctaaa atgttaaaag gagaaaaatg
     4801 aaacattttt taactttaag agatttttcc aaggaagaaa ttttaagtct tgtaaatcac
     4861 gctagtgagc ttaaaaaaga gcctaaaaaa cttttacaag ataaaacttt ggcaatgatt
     4921 tttgagaaaa actctacaag aacaagaatg gcttttgaat tagcaataac agagcttggc
     4981 ggaaaggctt tgtttttaag cagtaatgat ttacaactta gtcgtggcga gcctgtaaag
     5041 gatacagcta gggtgatagg aacgatggtt gattttgtaa tgatgagagt caataaacac
     5101 gaaactttac tcgaatttgc aagatactcc aaagctcctg tgatcaatgc tttaagtgag
     5161 ttttatcacc ctactcaggt tttaggagat ttgcttacta ttaaagaatg gaataaaatg
     5221 caaaatggta tagcaaaagt tgcttttatc ggagatagta acaatatgtg caattcttgg
     5281 cttattgtgg ctgcgatttt gggctttgaa tttagtatag ctataccaaa aaactataaa
     5341 attagccctg aaatttggga atttgctatg aaacaggctt tgatttcagg agctaaaatt
     5401 tccttaagtc atgataaatt tgaagcctta aaggataaag atgtagtcat taccgatact
     5461 tgggtttcta tgggtgaaga gaatgaaaaa gaacgcaaga ttaaagaatt tgaaggattt
     5521 atgattgatg aaaaggctat gagcgttgcc aataaagacg cgatattgct tcattgtttg
     5581 cctgcttata ggggttatga agtgagtgaa gaaatttttg aaaaacatgc agatgtgatt
     5641 tttgaagaag caagaaatcg cctttatgtg gtaaaagcct tgctttgctt tttggataat
     5701 cagagaggaa gagaatgaaa gagctagaaa agtatagcac ttgcttaaaa cgcattgatg
     5761 aatttagtca aaatctagga ataaagaaaa aagatagaac gatttttaaa atgaagcaaa
     5821 gcgagaatga aaacgaaaaa tgtttagttc ttgaaaatgg aagttttgat tctcctgagc
     5881 cttggtttgt gatcgatgaa aacgatgaaa ttcacacttt gctttcttta caaagtctta
     5941 agaatatact tgaaagttta aaacaaagtc aaaaagagaa ttttgaattg cgtttagaaa
     6001 aggcgattta tcaacaaatt cctgtagatt ttaacgatgt ttggacggtt gccatggatg
     6061 agatcaagca aaaggcacaa aatggcacca tggaagttag tattgatctt gaaaaattaa
     6121 tttctaaaat caaacaagag catccaaatt tatttgtaga tatgcaagcg atgatagaaa
     6181 gggtaaatca aaatgagaga ttataaagct tttgtaaaat actctaaagc aggaccacgt
     6241 tatacttctt atcctacagc agtagagttt aatacaaatt tcaaatacga agaatatata
     6301 gaaattttaa aaaagcaaga tagatcttta tcgctttatt ttcatttacc attttgtagg
     6361 agtgcctgtt atttttgtgg ttgcaatgtt atttatacag ccaaagaaga gagtaaagaa
     6421 aggtatttaa cttatatttt taaagagctt gatattttaa atactatttt agatactaaa
     6481 agagaagtag tgcaaatgca ctttgggggc ggaactccaa ctttttttag tgctaaacaa
     6541 cttcaaaatt tgattttaaa aatcagatct gtttttggaa atttttctaa agatgcagag
     6601 attagctgtg agatcgatcc gcgtttttta aatgaggaac aagccacagt tttaacgcaa
     6661 aatggcttta atcgtatcag ctttggagtg caggattttg atgaaaaagt tcaaaaagaa
     6721 attcatcgca tccagccttt tgaattaaca caaaatgctt taaatcttgt aagaagtaaa
     6781 ggcataaagt ctgtaaatat ggatttaatt tatggtttgc cttatcaaaa tttacaaagc
     6841 tttacacaaa ctttagaaaa agttatgctt ttaaaccctg atcgtttggc gatttttaat
     6901 tacgctcatg tgccttggct taagaaaaat atgagaaaat ttgatgaaaa taccttgcca
     6961 agtcctgatg ttaagcttga aattttagaa ttttgtgaga aatttttaag caaaaatggc
     7021 tataaaatga taggaatgga tcattttgca aaagaaaatg atgagctttt taaagcttta
     7081 gaaaatggaa ctttgcatag aaatttccaa ggttatacta ctaaaggcgg tgctgattta
     7141 gtcggtgttg ggcttacaag tataggtgaa ggacaaagac attatgcgca aaattttaaa
     7201 gatatgtcaa gttatgaagc tgcattagat agaggagttt taccttttga aagaggcgta
     7261 gctttaagcg atgatgatga gcttagaaaa gcagtgatta tggagttaat ggcaaatttt
     7321 aagcttgata ttaagtcaat agaaaaagaa ttttgcattg attttcagga gtattttaaa
     7381 gaggatttaa aagctttaga agaatacaaa gattttatta attttgatga aaattttatc
     7441 aaagtcaatg aaacaggtgt tttgcttata agaaatattg ctatgtgttt tgatgcttat
     7501 atgaaaaaca ttagtgaaga taaaaaagta ttctcaaaaa cggtgtaaga tgaaatttag
     7561 tcaaataagt gatgcttgtg ttaaatgtgg caaatgtata cctgtttgta ctatacatga
     7621 agaaaatcgc gatgaaatta ctagtccaag agggttttta gatcttttag ctgcttataa
     7681 agagggaagt ctagaacttg ataaagaagc taagaaagtt tttgaatctt gttttttatg
     7741 caccaattgt gttgaagtat gtccaagtaa attaagagta gataatgcca tagaagaagt
     7801 tcgttatgat atagctaaaa aatttggtat agcttggtat aaaaaactta tttttttctt
     7861 tttaagaaga cgcaaaattt tagatttggt agctaagctt ggctatgtgt ttcaaagttg
     7921 tgcgtttaaa attcaaaatg agaatgaaaa tacaggtatg aaggcaagat tttccatgcc
     7981 ttttgttaaa aagggaagat tacttacaag ttttaataaa aaaagtttct taaattctaa
     8041 tccaaaattt atcaataatg atggagaaaa aaccataggt ttttttgtag gttgtttggc
     8101 gaattatttt tacatagata cggctaatgc agtgcttaaa atcgctaagg aattaaaaat
     8161 caatgtggat ttgatgaaag aacaagtgtg ttgtggagcg ccgcaatttt ttacgggtga
     8221 ttttaaaagt gttgaagttt tggctaaaaa aaatattgag tattttgaaa aaaaaataga
     8281 aaaattagat gctattatag ttcctgaggc cacttgttcg gctatgttaa agatagatta
     8341 tgaacatttt tttataatgc aaaatgattt agactgggca aaacgcgcaa aatgtgtgtc
     8401 atctaagata tatatggcta gcgagtattt ttataaattt acttctttgg aagaaatttt
     8461 aaaaacaaaa aataaattta attatagtat tacttatcac gatccttgcc atgcaagaaa
     8521 aatgcaagga gtttttaaag agccaagaga acttttaaaa acaaattatc attttgtaga
     8581 aatgagtaat tctaatactt gttgcggttt tggcggggtg agtatgcaaa cggattatta
     8641 tgatagagct ttaagtgtag ggcttaaaaa agcacaaatg atcgatgaaa gtaaggctag
     8701 tgtggtaagc gccgagtgtt cagcttgcag aatgcaaatt tcaaatgcat tagaacaaaa
     8761 ttcaagcaag gttgtttttg ttagtccttt agaacttata gcaaaagctt tgtgatgatg
     8821 aagatagtat ttaaaggcaa aagttctgaa tacgaaattc aaagatcgtg cttttgtgtt
     8881 gatgcttttg tgattaaaga taagattgaa gaacgagatg gcgttgattt tatcacttca
     8941 aatgtagatc ttttggaatt tagtgatgac agttttactt ttgaagaaat tgtaaaacat
     9001 tttaatattt gtgatactga agatatgatt atcgttgaag attttgacat gaaatcaaac
     9061 aaagataatc aaaaccaaga agatgatata gaacacaaca tcttaaaatc cgaaaaaata
     9121 atacatgaaa acacaaaaca aacaagtatg ca
//
LOCUS       DARBAC010000068         9095 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.068, whole genome shotgun sequence.
ACCESSION   DARBAC010000068 DARBAC010000000
VERSION     DARBAC010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9095
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.068"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(71..258)
                     /gene="kdpF"
                     /locus_tag="SB799_001203"
                     /pseudo
     CDS             complement(71..258)
                     /gene="kdpF"
                     /locus_tag="SB799_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344095.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
     gene            complement(400..1824)
                     /locus_tag="SB799_001204"
     CDS             complement(400..1824)
                     /locus_tag="SB799_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HEG0868441.1"
                     /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGIL
                     MLVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTIL
                     APFVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSV
                     AVVSLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQ
                     EKFKDPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQV
                     VKNGIPQVDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMI
                     ALVAVFGISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISA
                     FVPLALGIGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFI
                     LPGLIGVITSCIAGYFIAMAAGYL"
     gene            complement(1988..3238)
                     /locus_tag="SB799_001205"
     CDS             complement(1988..3238)
                     /locus_tag="SB799_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEG0868442.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQTHDKGKNYFDSFYKHNINSAFVDSKGLAKKSVYELLNEQILPPLFPTNK
                     SQELAKKIIECLNEEGYFEYDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKLYELEG"
     gene            complement(3238..3966)
                     /gene="lptB"
                     /locus_tag="SB799_001206"
     CDS             complement(3238..3966)
                     /gene="lptB"
                     /locus_tag="SB799_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEG0868443.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(3959..4366)
                     /gene="tsaE"
                     /locus_tag="SB799_001207"
     CDS             complement(3959..4366)
                     /gene="tsaE"
                     /locus_tag="SB799_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEG0868444.1"
                     /translation="MKEFILAKDEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDARVDSPTFSTMQKYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(4363..4608)
                     /locus_tag="SB799_001208"
     CDS             complement(4363..4608)
                     /locus_tag="SB799_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEG0868445.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLAIPSTKSIPKNAQNEYVVKL"
     gene            4763..5983
                     /locus_tag="SB799_001209"
     CDS             4763..5983
                     /locus_tag="SB799_001209"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEG0868446.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKL
                     LAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMIIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            5996..6439
                     /locus_tag="SB799_001210"
     CDS             5996..6439
                     /locus_tag="SB799_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEG0868447.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTFKSLGLHEVSVKLGHAIHAKFNINIKAE"
     gene            6439..6981
                     /gene="hslV"
                     /locus_tag="SB799_001211"
     CDS             6439..6981
                     /gene="hslV"
                     /locus_tag="SB799_001211"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEG0868448.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHASLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            6978..8297
                     /gene="hslU"
                     /locus_tag="SB799_001212"
     CDS             6978..8297
                     /gene="hslU"
                     /locus_tag="SB799_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEG0868449.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSNIQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELEFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            8294..>9095
                     /gene="era"
                     /locus_tag="SB799_001213"
     CDS             8294..>9095
                     /gene="era"
                     /locus_tag="SB799_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEG0868450.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIIALNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDKHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLIHRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLK"
BASE COUNT         3373 a         1558 c         1409 g         2755 t
ORIGIN      
        1 aatttccaaa aattaaagcc aatataaaag ctataatcag tgttattaaa atttctagca
       61 tatttttcct ttaaaatttt tcaggatata atagagcata aaataaataa agagcaagta
      121 ttaagcttaa aactagtaaa aatatcatcc gcgtgtccta gtttgaactt cacaaaaacg
      181 gataaaaaac cataaactac caaaagctaa aagcagaagc aaagcaaaga taacatccat
      241 aggatagccc tttctcattg attcaaaata ggatttattc tatccttgtt aagcttatat
      301 tttgattaat actaatttta tgatttattt ataattttta tctatattaa ataaaaagac
      361 aaatgaaaaa tttagcagga aaaatcctgc taaaaattgt taaagataac ccgctgccat
      421 agcaataaaa tatcctgcta tacaagaagt gattacacct ataagacctg gtaaaataaa
      481 actatgattg ataacaaatt taccgatgtg agtagtacct gatctatcaa attgtatagt
      541 agctaaatcg cttggataag ttggtaaaat ataataccca taacaagcag ccgcaaaggc
      601 aacaattaca ccaggttcaa caccaattcc taaagccaaa ggaacaaaag ctgaaatagc
      661 cgctgcttga gagtttacaa attttgaaat taaaagaagc attacagcat aagtccaagg
      721 atgctctttt actatatctc caagcgctgc tttcatcata ggagtgtgaa ctgcaaacat
      781 agtatcagcc atccaagaaa ttccaaaaac cgcaacaagt gctatcatac ctgatttaaa
      841 aatttcatta gagccgattt tctttgcatc tgttttagta aagatgataa tcaaagaacc
      901 tgctaaaagc ataaacatct gaataactga aaccatggat aaaacatcca ttttaggatt
      961 gcctaaagca tctacttgag gaatgccatt ttttacaact tgcccccagt ttggacgcaa
     1021 gaaatcaaat acacctaata aagccactaa agcaatagct cctaagaaaa tccacattgc
     1081 aacccaattg ctttttggaa gtttaacacc taaaagtgtt ttagaatccc cataaacata
     1141 ttttttaaat tcaggatctt taaatttttc ttgaaatact tcatctttat ccaaatcttt
     1201 tcctctaaac caagaaaaaa ttcctataca caatacacca aataatgtac taggtatggt
     1261 aatttgaaga agattaatat aaccatcaaa acctgctaat ttatgattag catttaaaag
     1321 caaagcagtc aaactcacaa cagccacaga tacaggagat gcaataatac ccatttgtga
     1381 tgatatagaa gctgccgcca ttggacgctc aggacgaata ccgtttttaa tcgctatatc
     1441 ataaataata ggcataatag tataaaccac atgtcctgtt ccgcaaagta tggtcaaaaa
     1501 gcaggttaca aaaggcgcta atattgtcaa aaacttagga ttgcgtctta aaattctttc
     1561 tgctatttga agcataacat ccaaaccacc acttgcttgc aaagttgcac tcgcaaccac
     1621 taccgctaaa atcgtaagca taacatctat ggctggtttt ccaggcttta tatgaaaagc
     1681 aaatacaagc attaaaatac ctataccacc aagtaaacca agcgctatgc cgcctttttt
     1741 tgcaccgtaa aaaagacaaa ttaaaacgat aatgatttgg attgcaaatt gccctccctc
     1801 actaaggctt gttaaaaagt ccattttaac tcctttgaaa attgatattt aaaaacagtt
     1861 attattgtat cacattttta aattaaagaa taatatttct aaaaataaaa caataatttt
     1921 ttatattatt taaattaaat ttaaatataa aacaaaagtg taatgggttt gatagattga
     1981 tagaatttta tccttcaagt tcatataatt tttttctatc tgtagagctt gctatattaa
     2041 gatgtttgcg atattttgta atagttcttc gccctatatc gactttaaat tcttctttga
     2101 ttaattctaa aattttacta tcgcttaaag gtttattgcg atcttcattc tttactaaat
     2161 ttgccacaaa ttctttaaca cctacatttg aagtctctcc ctcttcatca agagcaaaag
     2221 caaaaaaatc acgcaagggg ataagtcctc tttcacaact taaatattta tttgccacag
     2281 ctcttgatat agtcgaagca ttgcgttcta aatcaagtgc taaatcctta aaagtcatag
     2341 gttttatctc ttttcccatg aaaaaatcat attgatattc tactatcata agccctattt
     2401 tataaagagt agcttttctc atcgctaaag catcaactaa attttttgct tctttgatgt
     2461 aatgacttaa aaaatcatgc tctaaaccat cagtttggat tgaaatttca ggataataat
     2521 catcattgat ttttacttta atttcaccat tttctttata aacaaaaata tcaggaacaa
     2581 ttatacgaga atcttcaaaa tattccaaaa aagggggagt gctaaagcgc ttaagtacag
     2641 ctaatgcttc tttatataaa ggctctttgg tatagttttg tatattttca aaatccataa
     2701 ttaacattct acaaaactca tcaatatctt catctaattc catattttca agagcaaata
     2761 aaaatgcttc tttataatct ttagctccca ctcctacagg atctaaaaat ttaaatcttg
     2821 ctcttactcg ctcaatttct tctaaggaat actcttttaa aaattcttca tcgtattcaa
     2881 aatatccttc ctcatttaag cattctataa ttttttttgc aagttcttga gatttgtttg
     2941 taggaaataa aggaggaaga atctgttcat ttaaaagctc ataaacactt tttttggcaa
     3001 gtcctttact atccacaaaa gccgaattta tattatgttt ataaaatgaa tcaaaataat
     3061 tcttaccctt atcatgagtt tgtatcgaat cttgaacatt taagaaagga ttatcctcag
     3121 caaatttatc taaattttct tttaaatcct ctatatttgc ttgtaaaatc ggcaaccaag
     3181 agcgtaaagt ttgagaaatt ttagtcttgg gcgcttgggt gattttttgc tttaacatca
     3241 atcaaggagt ttaaactccg ctcctaaata atactttttc acgtctttat tggttgcaat
     3301 ttcatcagca ttcccactag caagcaaaga acctgatctt ataacataag ctctatcaca
     3361 aatagccaaa gtctcacgca cattatgatc ggtaattaaa accccaatcc ccaatctttt
     3421 aagctcttta attaaagttt gaatttcagc cactgctata ggatcaacac ctgcaaaagg
     3481 ctcatcaaga agtaaaaact taggttcgca catcaagctt ctagcgatct cgcaacgcct
     3541 tctttcacct ccacttaaac ttaaaccttt ccttaaacga ataggctcta tacttaagag
     3601 ttcaagcatt tgctcaactt tatcatgtaa aattttttta tctttataaa aaatctgagc
     3661 cgctaaaagc aggttatctt ctacgcttaa atccttaaaa atactacttt cttgaggtaa
     3721 ataacctatc cctgatctag ctcttttatt taaaggatct tttgtcacat ctaaaccatc
     3781 taaaagaact tttccactac ttggggaaat aagtccacat atcatataaa aagttgtcgt
     3841 ttttcctgca ccatttggcc ctaaaagtcc tacaacttct ccgctattaa cctctaaaga
     3901 aattccatgt ataatcttag tttttttaat aattttttct aaatttacaa tttctaattt
     3961 actcataaat ttcatacttt cttttgtcgt ctttaatgct aattttaatc tggatagtag
     4021 aaattccaaa tttcattaaa gtttttttca aattttcacc gccccattca accaaatgca
     4081 aacctttttc aaaaaaattt tcaaataaac cattcgctaa aagtccttct aaaccttctt
     4141 gataaatatc ataatgataa atgcaaatat catgattttc atatttttgc atagtggaaa
     4201 aagttggaga atctaccctt gcatcaagac caagaaattt aacccaagct tgtactaagc
     4261 ttgtttttcc gctagccaaa tctccttgaa gcaaaacaac accttcttta ggcattattt
     4321 gaagcatcgt tttgatctca tcttttgcta aaataaattc tttcataatt ttaccacata
     4381 ttcattttgt gcgtttttag gaatgctttt cgtgctaggt atagctagga ctttatattt
     4441 ttgagtgtat tcagtaaaat gcaaagtgat gatatcaccc accttaacct ctttactcgc
     4501 cttaacaata acgccattaa tccccactac accactttta cacatatcct cagaaatagc
     4561 tcttcttttc gtgatattaa ctacatttaa aaatttatct actctcataa aagcaatttt
     4621 agcaaaaaaa atcaattttt agaacaaaat ttgcttacgc ctttgcttta ttttttaaga
     4681 aaatagcaag taaaaacttt tctttaatga aatttggata caattttaca attttcaaat
     4741 ctattttaac aaaggatatc ttatgaaaaa tgaagtaaaa aaagtagttt tagcgtattc
     4801 tggagggctt gatacgagca tcattttaaa atggcttcaa gatgagtata attgtgaagt
     4861 tgtaactttt acagcagata ttggtcaagg tgaagaactc gaacctgcaa gaaaaaaagc
     4921 cctttcttta ggcataaaag aagaaaatat tttcattaaa gatttaagag atgaatttgt
     4981 taaagattat gtatttccta tgtttagagc caatgcgatt tatgaaggag aatatctttt
     5041 aggaacaagt atagcaagac cacttatagc aaaaactcaa gcacaaatcg ccctgcaaac
     5101 aggtgctgat gcggtaagcc atggcgccac aggtaaagga aatgatcaag tgcgttttga
     5161 acttggttat cttgctttta atcccgattt aaaaatcatc gctccatggc gtgagtggga
     5221 tttaaacagt cgtgaaaaac ttcttgctta tgcgcaaaaa cacggtattg atatttctaa
     5281 gaaaaaagga aaatcccctt attctatgga cgcaaattta cttcatattt cttacgaagg
     5341 acttgtttta gaagatcctg cacacgcacc tgaagaagat atgtggagat ggagtaaaag
     5401 cccaaaagac gctccaaatg aaagtgaaat tatagaactt gatttccaaa aaggagattt
     5461 agtagcgata aatggagaaa aactaagtcc cgcaggactt ttaaccaaac ttaacgaact
     5521 aggctgcaaa cacggtatag gacgccttga tatagtagaa aatcgctatg taggcatgaa
     5581 aagccgtggt tgttacgaaa ctccaggcgg tactatactt ttaaaagcac acagagcact
     5641 tgaaagcatc acgcttgata gagaagcagc gcacttaaaa gatgaactca tgccaaaata
     5701 cgcaagttta atttataatg gctattggtt ctcgcctgaa agaatgatgc ttcaagcctt
     5761 aatcgacgag tcacaaattc atgccaatgg cagagtaaaa ctcgagcttt acaaaggcaa
     5821 tgtgatgatt ataggacgcg aaagtgcaaa tgatagcttg tttaacgcag cttattgtac
     5881 ttttgaagaa gatgaagtgt ataatcaaaa agacgcagca ggctttatca agcttaatgc
     5941 tttgcgtttt atcatcgcag gaaaaaatgg aagaaaattt taataaagga ataaaatgaa
     6001 agtattatta atcaaagatg taaaagcact tggaaaagca ggagaaataa aagaagtaaa
     6061 agacggctac ggacaaaatt tcttaatcgc taaaggcttt gctaaagcag ctactaatga
     6121 agttttaaga aaatacgaaa gcgacaagaa aaaagaggct gaaaatttac gctttgaaat
     6181 cgcaaattta gaaaaactca aagaagaact tagcaaaatc actcttgaaa tttcaaaacc
     6241 cgtaggtgca aatggaagtt tgtttggtgg agtaaccaaa gatgaaatcg ctcacgccct
     6301 aaaagagcaa agtcacatag aaatcgataa aaaaagttta gaatgtgaca cttttaaaag
     6361 tcttggactt catgaagtaa gcgtaaagct cggacacgca atccacgcta aatttaatat
     6421 aaatataaag gcggaataat gtttcacgca acaacgattt tagcttacaa aggcaaaaac
     6481 aaatccgtaa tcggtggaga tggacaagta agctttggaa acacagtatt aaaaggcaat
     6541 gccgtaaaaa taagaaaact taataatggt aaagttttag ccggttttgc aggctcaaca
     6601 gctgatgctt ttaatctttt tgatatgttt gaaaatctcc ttcaaagttc taaaggcgat
     6661 cttttaaaag cagcgattga cttttctaaa gaatggagaa aggacaaata cctaagaaaa
     6721 cttgaagcca tgatgcttgt acttgataga aatcacattt ttttactttc tggtacaggc
     6781 gatgtggtcg aacccgaaga tggacaaatc gcagccatag gaagtggtgg aaactatgca
     6841 ctttcagctg ctagagcctt agcaaaacat gcaagtttag atgaagaaga gcttgtaaaa
     6901 tcaagccttc aaatcgcggg tgaaatttgc atttatacca atactaatat caaaacttat
     6961 gtgatcgagg atgagaaatg aatctaactc caaaagaaat tgttaaattt ttagatgatt
     7021 atgtcatagg acaaaaaaaa gctaaaaaaa tcatagctat agctttaaga aatcgctacc
     7081 gcagaatgca acttagccct gagttgcaag atgatatagt gccaaaaaat atcttgatga
     7141 taggttctac aggcgtagga aaaacagaaa tcgctaggcg tttagctaaa atgatgggct
     7201 ttccttttat caaaatcgaa gcgagcaaat atactgaagt aggttttgta ggtcgtgatg
     7261 tagaaagtat ggtaagagat cttgccaatg cggctttaaa tttagtaaaa aatgagcaaa
     7321 gagaaaaaaa caaagataaa atcgatgaat ttatagaaaa taaaatttta gaaaaacttt
     7381 tgccaccttt accaaagggt atcagcgatg aaaaacaaga agaatataaa aacagtcttg
     7441 aaaaaatgag aactaaacta agaaatggcg atcttgatga aagcactata gagatagaaa
     7501 tttcgcaaaa tatgttcgat accaatccta acctacctcc tgaaatgggt gcaatgcaag
     7561 atatagttaa ggttataggt gttggcagta aaaaagtcaa aaaagaaatg aaaatcaaag
     7621 acgctaaaaa tgctttaaaa aacgaagcag gagaaaaaat cctagatcaa gaaagtatca
     7681 aaagcgaagc cttaaaaaga gcggaaaatg aagggattat ttttattgat gaaatcgata
     7741 aaatcgctgt ttcaagcgga aattcaaatc gccaagatcc aagtaaagaa ggggtgcaaa
     7801 gagacttact tcctatagtc gagggatcaa atatacaaac aaaaataggt actttaaaaa
     7861 ccgatcatat tctttttatc gctgcagggg cttttcatct tagcaaacca agtgatctta
     7921 tccctgaact tcaaggacgc tttcctttaa gagtggaatt agatagtctt gatgataaag
     7981 ctctttatga aattttaaca cgccctaaaa attcactttt aaaacaatac tctcagcttt
     8041 taaaaactga aaatttagaa cttgaatttg atgatgaagc tattaaagaa atagcgaaaa
     8101 tagcttcaag agccaatgaa gaaatgcaag atataggtgc tagacgctta catactgtga
     8161 tagaaaaatt acttgaagat ctaagctttg aagctgatga gtatgcgggt aaaaaattcg
     8221 tagtggataa aaaaatggta gaagaaaaac tcggagatat catagaaaat aaagatcttg
     8281 caaggtatat tttgtgaaaa gtggctttgt tagcatcata gggcgtacta atgcaggaaa
     8341 aagtacttta atcaattcct tattagaaga aaaaatcgcc ctagtttctc acaaacaaaa
     8401 cgccacaaga cgtaaaatta aagccatagt gatgcatgaa aaaaatcaaa tcattttcat
     8461 cgatacccca ggacttcacg aaagcggtgc tacgcttaat caactgcttg tccaaagtgc
     8521 tattaaatcc atgggggatt gtgatgtgat tttatttgtg gcgagtgttt ttgatagtac
     8581 aaaagactat gaaaattttc ttagtctaaa cccacaagta ccacatatca tcgctttaaa
     8641 taaagtagat ttaaccgaca atgctacact tttaaaaaaa cttagcgaat atgcaaaatt
     8701 tagccaacat tttaaagcta tcattcctta ttcttctaag aaaaaaagct ataaaaaagg
     8761 cttattagat gaaatagtaa aataccttga taaacatgag tatttttatg atcctgaatt
     8821 tttaagtgcg agtagcgaaa aagaacttta tagagatttc atacttgaaa gtatttatga
     8881 aaatttaagt gatgagcttc cttatagtag cgaagtgctt atccatcgca ccaaagacac
     8941 acctaatctt ttaatcctag aagccaatat catcaccgat acaaactctc acaagggtat
     9001 gcttatagga aaagaagggg caactttaaa aagaataggc aaagatgcac gctttaaaat
     9061 ttcaaaactt gcacaaaaaa aggtactttt aaagc
//
LOCUS       DARBAC010000069         8863 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.069, whole genome shotgun sequence.
ACCESSION   DARBAC010000069 DARBAC010000000
VERSION     DARBAC010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8863
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.069"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(70..822)
                     /locus_tag="SB799_001214"
     CDS             complement(70..822)
                     /locus_tag="SB799_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868451.1"
                     /translation="MLAFFKGLGIGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEIANTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDAILECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNTNVNIAPR
                     MLNAKSDNIELSSPIISEKEQILSAKALFICK"
     gene            895..1914
                     /gene="mutY"
                     /locus_tag="SB799_001215"
     CDS             895..1914
                     /gene="mutY"
                     /locus_tag="SB799_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEG0868452.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLKKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGAKLPKEVEDLKKLSGIGVYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKGAKELLNVNHAFDHNQALLDVGALVCVSKNAKCGICPLYDF
                     CQGKFHTELYPRAKKILYESLNLNLFLFEFNKKFAIQKSQDKLYKGMYNFPFFKEGEY
                     KLSKDMSFVGEFKHGYTKYKLNIKVYHQILNNENKNYEFKTLKELESTALSALSLNAL
                     KLIKL"
     gene            complement(1900..3159)
                     /locus_tag="SB799_001216"
     CDS             complement(1900..3159)
                     /locus_tag="SB799_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868453.1"
                     /translation="MQELTRTKKIRSIIAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPVIQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVISVVLMALGSFMIAAL
                     PSKDTVGDLAIILLLIARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMFLFFSIDDMKDYAWRILFVIGGILALGSLFVRKMMNESATKLHQHE
                     DRGTLKALCKSWKPFLMVLGVTSGGSLAFYTITTYTKTFMENTGMDKMLVNNLFLGAL
                     FILMIIQPLFGYIGDKIGHKRSLIVFCILALVGIYPIFSLIANNAQNNPSLTFMLVVL
                     LFVILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAVFGGSAPWVALQFKNAGIEN
                     GFFIYIAIFTIIMLIATLYLPKKSQLN"
     gene            3325..4182
                     /locus_tag="SB799_001217"
     CDS             3325..4182
                     /locus_tag="SB799_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HEG0868454.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSRKGIRGVMSEEKFQNLAHEIS
                     NKAELFTFHLLGDPLLLPNLENYLKIAKSEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKAPKSNL
                     KIYEFLAKEFEVKIDTNLSKNRLQRHILLHQNKLFKWPNLKDEPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDAKADINLGNVFENNFDKLFKSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLGD"
     gene            complement(4179..4985)
                     /locus_tag="SB799_001218"
     CDS             complement(4179..4985)
                     /locus_tag="SB799_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEG0868455.1"
                     /translation="MKKILIIMSLFLITLNAKERLVVLDPASIETLFMLKAEDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAEFLKQEFTQNLKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTHILLRLSPKIIDRIQEFKTKLENNNF"
     gene            complement(4982..5758)
                     /locus_tag="SB799_001219"
     CDS             complement(4982..5758)
                     /locus_tag="SB799_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868456.1"
                     /translation="MLKIQDLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGEISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYA
                     NLKHAFSSYSKEDILEIKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLSLCEKLVKEKNIAVVAILHDLNLASMFCDKILFLKEGEIK
                     YFGTSKELFTQEILKEIYDLNCEIIYKNSKPYILALKEKK"
     gene            complement(5758..6744)
                     /locus_tag="SB799_001220"
     CDS             complement(5758..6744)
                     /locus_tag="SB799_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEG0868457.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFTALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHTIRLLLKNYDNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            complement(6719..8836)
                     /locus_tag="SB799_001221"
     CDS             complement(6719..8836)
                     /locus_tag="SB799_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEG0868458.1"
                     /translation="MHPNKKAFKLSLFALLLITNLNAQESNEAINLQKVVVSATGFEQ
                     DADSNLRNVISIEGKDLQNKGYVSLEQALERISGISFVNFGLGRNIDMRGQGDKSNIA
                     VKVMIDGRAINVLDNSHGVTPLDSINLDNVERIEIIPGGGSVLYGSGTRGGVINIITK
                     KQKSDAFAINLKSSAYDHGGLGGNLGINGAKQINENLAFSFDIQSFNLDGYQEGYNEK
                     GYFINTKTYIDINDNSDLTLGYDYFKSKNTSSGYLTKAQAQSDPTQKGNSDNITQINR
                     PEISLDYHYYFDDIWEFNLEAFWQNQKIDYLKDEISMMGTTAYQNGSGFEDTLTGISL
                     KNKLNYANNSYFIFGYEFTNHDAKRKSLVYYSVPGVINYHRMTTLMDMTKQSHSIFAL
                     NSHNFNEFFTLSGGARYEFSTYDTDRSYRNEMSMNIPRPPSDSTTLFDTNKNTNNFAF
                     EITPNFKYSDTGNLYLKYERGFVSPAPAQFVNRNKTGNGIPPYYSSNLKAEIFDTFEL
                     GIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVELSLSQ
                     NFLDDDLIFRESLTYLDAKISKGINDGMRIPYVSKIKATAGLEYAWNKNFSNFIDLTY
                     FSRAKDGGTIDENTGKMSKNSWIRDYFLTDIGMKYNYKKLQILAGIRNLFDKRYYTYQ
                     DSINDQYLVGNGRNYYVEFKYAF"
BASE COUNT         3113 a         1325 c         1343 g         3082 t
ORIGIN      
        1 aaatttctga aagaattgaa gataaaagta tagcaaaata aacttaaaag gagtttattt
       61 tgccttaagt tatttgcaaa taaataaagc tttcgcgctt aaaatttgtt ctttttcgct
      121 gataattgga gatgaaagtt ctatattgtc agattttgca tttaacattc taggtgcgat
      181 attgacattt gtatttactt gtaaattttt caatacacaa gttttattaa gatctaaaga
      241 gtaagttttt tcatattcgt atgatgtttt taaaagctct ttgtagagat tttctttgtt
      301 gttgtttagt gtatcttttg aaaattttgt ttgtatggct ggtgttgaaa cgctgatgaa
      361 attattttta gctatgatag aattgatgtc atttaaaagc ttgttaaaat ctgcaagttg
      421 attttcttta aattcacatt ctaaaattgc atcaaatctt tgaccttttg gagtttgtat
      481 accatcttta taggaaaaat taggctctaa agaaaaactt cctccgctac aaaaattttc
      541 tttttttgag cgttctaaaa tttgattgaa agtatttgcg atttcagctt tttcgctatt
      601 atccaatgtg atttttgagc ttaaattttc atttgcccaa aaattaatat ttgcatataa
      661 aatatcgggt tttagcgtat tgcttacttc tatatttctt gaaaaatata aatcatgatt
      721 agagtctttt ttgcctaaaa attctacatt aaaaactact cctgcaacaa aaagtaataa
      781 acataaaaaa cctataccta aacctttaaa aaaagctaac atggatatcc ttaataattt
      841 aatttgagct aattttagca aaaaatttta aaattttttg ttatactctc atttatgcaa
      901 aaaaaagagc ttgaaaaact acaagaaaat ttacttcttt ggtatgaaaa aaatggacgc
      961 aaaactttac cttggcgtaa tttacaaagt caaaattgtg atgaaagttt aaagcatatt
     1021 gatagagctt atggggttta tatcagcgaa attatgcttc agcaaactca agttaaatca
     1081 gttttagaaa ggttttattt cccctttttg aaaaaatttc ctactttaga aagtttggct
     1141 aatgctaatg aagatgaact tttaaaggct tggcaagggc ttggttacta cactcgtgct
     1201 agaaatttaa aaaaggcggc tttagaatgt gtggataagt ttggggctaa attacccaaa
     1261 gaagttgagg atctaaaaaa attaagcggc ataggagttt atacagcagg tgctatagct
     1321 tgttttggct atgatcaaaa ggtttctttt gttgatggca atatacgccg tgtgctttct
     1381 cgtctttttg ctttagaaaa tcctagcatg aaagaacttg aaaaaggagc taaagagctt
     1441 ttaaatgtaa atcatgcttt tgatcacaac caagctttgc ttgatgtagg ggctttggtt
     1501 tgcgtgagta aaaatgcaaa gtgtggaatt tgtcctttgt atgatttttg tcaaggcaaa
     1561 tttcatacag agctttatcc aagagctaaa aaaatacttt atgagagttt aaatttaaat
     1621 ctttttttgt ttgaatttaa taaaaaattt gcgatacaga aaagccaaga taagctttat
     1681 aaaggtatgt ataattttcc tttttttaaa gaaggagagt ataaactttc taaagatatg
     1741 agttttgtag gggagtttaa gcacggctat actaagtata aacttaatat caaggtttat
     1801 catcaaattt taaacaatga aaataaaaat tatgaattta aaaccttaaa agagttagaa
     1861 agtaccgcac tttcggcact ttctttaaat gcgttaaaat taattaagct gtgatttttt
     1921 aggcaaatat aaagtagcta taagcatgat gattgtaaaa atagctatat agataaaaaa
     1981 gccattttct atacctgcat ttttaaattg taaagcaacc caaggagcag atcctccaaa
     2041 aacagcattt gaaatagcat aacccaaacc tgtccctaaa gctcttacat gttcaggaaa
     2101 aagttttgct ttaaaaatcc cagcaactga agtataaaaa cttaaaataa caaacaataa
     2161 taccaccaac ataaatgtca aagaaggatt attttgtgcg ttattggcta taagtgaaaa
     2221 aataggataa attcctacca atgccaaaat acaaaataca attaaagatc gtttgtgacc
     2281 tattttatct cctatatatc caaaaagagg ttgaatgatc attagtataa ataaagcacc
     2341 taagaaaaga ttattaacaa gcattttatc catacccgta ttttccataa aagttttagt
     2401 ataagttgta atagtataaa aagctaaaga acctccagaa gtaaccccaa gtaccattaa
     2461 aaaaggtttc caagatttgc ataatgcttt taaagtacca cgatcttcat gctggtgaag
     2521 ttttgtagca ctttcattca tcatttttct tacaaaaagc gagcctagtg ctaaaattcc
     2581 gcctattaca aaaagtattc tccaagcata atctttcata tcatcaatgc taaaaaataa
     2641 aaacattata ctaatgcttg caacggccaa aagttgacca cctattaggg ttacatactg
     2701 aaaagatgag taaaaaccgc gttttccttc tgtagcaagt tctgaaagat aagtagctgc
     2761 tatgccatac tccccgccta cactaagacc ttgaatgagt cttgctatta aaagtaagat
     2821 aatagcaaga tctcccactg tatctttgct tggcaaggct gctatcataa aagagcccaa
     2881 agccattaaa accactgata taaccataga ttttttacga cctactttat cagctaaaga
     2941 gccaaaaagc caagagccta taggacgcat aaaaaaccct gctgcaaaaa ccccaaaggc
     3001 attgatttgc tggataacag gattatctga agttgaaaaa gtatgagcaa aataagttgc
     3061 tgtaaaagcg tagatataaa agtcaaacca ctctactaaa tttccgctac ttgcagcaat
     3121 aatagagcga atttttttcg tgcgagtaag ctcttgcata aacccttcct taattttaga
     3181 tttttattta agtatagtgt gatttttgtt taatatattt aaaaataaag aagagaaata
     3241 aaaaagataa aaatatcgat aaaaatgtta catattttaa taaatttcat aaattttggt
     3301 aaaatgttta ctctaggaaa tataatgaaa tttaaaaaaa tatatataga attaagcgat
     3361 atttgtggtt taaaatgcga tttttgtcct tctcgaaaag gaattcgcgg ggtaatgagt
     3421 gaagaaaaat ttcaaaactt agctcatgaa atttctaata aggctgagct ttttaccttt
     3481 catcttttgg gtgatccttt gcttttacct aatttggaaa attatctaaa aatcgcaaaa
     3541 agtgaagcta tgaagcttga aatcactaca agtggctttt atttaaattc taaaaatcaa
     3601 gctttattgt tagggtatga gaatatccat caaatcaata tttctttaat gtctttttta
     3661 agtcaaagca aaatttcttt agaacagtat tttaagccta ttttagaact ttgcaaaaag
     3721 catttagagc aaaaaagcct ttcttttatc aatctaagac tttggaattt agatgctaat
     3781 tttaaagcac ctaagtcaaa tttaaaaatt tatgagtttt tagccaaaga atttgaagtt
     3841 aagattgata caaacttaag taaaaatcgc ttgcaaagac atattttgct tcatcaaaat
     3901 aaacttttta aatggccaaa tttaaaagat gaaccccttt ataaaaaagg aaaatgtcat
     3961 gctttaaaag agcaaattgg gattttaagt gatggaagtt tggtgccttg ctgtttggat
     4021 gctaaagcag atattaactt aggaaatgtt tttgaaaata actttgataa gctttttaaa
     4081 tcaccgcgta taaagatgat gaaaaaagct tttgaagaag ataaacgcat agaaaaactt
     4141 tgtcaaactt gcgaattttt taaagcaaga ttgggtgatt aaaaattgtt attttctagc
     4201 tttgttttaa attcttgaat tctatctatt atcttaggac taagacgtaa taatatatgt
     4261 gtatctttgt taaaataaat acttcctgtt ttaactgctt tggtattttt caataaagca
     4321 tttgtatcta aaaggttgtt tttagcatta attccaagaa tgagtatgtc tggattttgt
     4381 ttcagtatat attctgctga tataacaggt cttgaaattt gactttgcgg gcttaaattt
     4441 ttaatcccta taagtcttaa aatatcagct attaaagaat tatcattaaa ggccattaaa
     4501 gggttgctag aataaagata aatcgcactt ttatttaggg gtttatcgct taattttttt
     4561 aaattttggg taaattcttg ttttaaaaac tctgcttctt tttctttttt ggtgatttgg
     4621 cctaaggttg tgatattttt tgttatatct tctaaacgct cggcttttaa attgatactt
     4681 ttgataccaa aatttttaag tccttcttct aaatttaaag aataagagct taaaatcacc
     4741 aaacttggtt ttaatgctac tattttttca agtgaaggat ttgaaaaagt gcctacgctt
     4801 gtaagttttg aggtttgatc tttaggatag atatttgagt gttgtaaagt ggcaatgcct
     4861 acgatttgat cttcagcctt aagcataaaa agggtttcta tgcttgcagg atcaagcact
     4921 acaaggcgtt cctttgcatt tagtgtgatt aaaaataaac tcataataat taaaattttt
     4981 ttcatttttt ctcctttaaa gctaaaatat aaggtttaga atttttataa ataatctcgc
     5041 agtttaaatc ataaatttct tttaaaattt cttgagtaaa aagctcttta ctcgttccaa
     5101 aatactttat ctccccttct tttaaaaaaa ggattttatc gcagaacata gaagctaaat
     5161 ttaaatcatg caagatagca acaacggcta tatttttttc tttaactagt ttttcgcaaa
     5221 ggcttaaaag ctctatagca tagtttaaat caagggctga agtgggttca tctaaaaaaa
     5281 gaatttttgg ctttttaagt aaagctcttg ctaaaagcat tctttgaaat tcacccccac
     5341 ttaaagaaag tatgcttctt tctagaaaat tttcaagtct taaatcctta gcaaattctt
     5401 taatttctaa aatatcttct ttagaataag aactaaaagc gtgttttaaa ttcgcatatt
     5461 tgctcattaa aagcacatcg atgactttta aaggggtgtt taattctgat ttttgaggca
     5521 caaatccgca aattttggca aattctttaa gagaaaaatc tttgatattt gtgttaaaaa
     5581 gacttatttc tcctttattt ggacttaaat ttttaagtat aagttttaaa agagtgcttt
     5641 tacctgagcc atttggccct aaaattccta taaaagcctg atttttaagt tctaaatgaa
     5701 tgttttttag taaatctttt tggtgataag caaagcttaa atcttgtatt tttagcatta
     5761 taaaaatctc ctagcactta aagccaagta taaaaaaata ggagctccaa aaaatgcagt
     5821 taaaattcca atcggaattt gtacaggggc taaaagagtt cttgctaaag tatcacaaat
     5881 aagtaaaaat aatcctccaa atgctgtaca taaagggata actaaggcat tatcataatt
     5941 tttaagcaaa agtcttatag tatgaggaat gattagtcca acaaagccta taagtccgct
     6001 aaaagcaacc gcaaaagata cagccaagga tgagacaatg agtaaattta tctttaattt
     6061 ttgagcattt acccctagat ttctagcttc atcatctccg cttaaaagta tgtttaattc
     6121 gtttttatga gcgtaaaaat aaaacaaaca aaaaattaaa ggcaagatta aaattcccac
     6181 acgaaaccaa gaagcattgc ctatatttcc cataagccaa gcgactattt taaaagaatc
     6241 ctcgcctata agataagtga aaaaagaagt aaaagctcct aaaaaagatg aagctgctat
     6301 gccgataatg agtaaagtcg ctatagaagc tttagaagaa attttaaaaa ctcctagggc
     6361 aaaaaaggca gagcaaacaa aacctaaaat tccataataa taatcattca attttaacaa
     6421 atacgccaaa accgctccaa aggttgccgc agaagctata cctatgatat aaggatcggc
     6481 tataggattt gaaaatacat tttgagtgat agccccacta ctagctagaa gcataccgat
     6541 taaaatcgcc attataatcc gtggtaagcg tccatctatg atgatttgtc ttaaaatttc
     6601 atcttggcta aagatatatg aaaaaagttc ttttgggttt aaattctcat ctcctaagca
     6661 aagtgctgta aaagaagcga ttatataagc taccaaaagc cctataatca ctaaaatttt
     6721 agaatgcgta tttaaattca acatagtagt ttctgccatt cccaactagg tattgatcat
     6781 ttatactgtc ttgataggtg tagtatcttt tatcgaaaag attgcgaatt cctgctaaaa
     6841 tttgtaattt tttataatta tatttcatgc caatatctgt taaaaaataa tcccttatcc
     6901 aagaattttt agacattttt cctgtatttt catctatagt tccaccatct tttgctctag
     6961 aaaaataggt tagatcaata aaatttgaga aatttttatt ccaagcgtat tcaagcccag
     7021 ctgtggcttt gatttttgaa acataaggaa ttctcatgcc gtcattaata cctttagaaa
     7081 ttttagcatc aagataagtt agactttctc taaagattaa atcatcatct aaaaaatttt
     7141 gactcagact taattctact cctaaacggc gagtttgatc tatattataa tatttccacc
     7201 aagatccact agtagaatga gggtttccaa gataagaaat ttcatctttg cttagggtgt
     7261 aaaataaagt tagattaaag ccgtaaaaat cccaccaaaa atcatcaata cctagttcaa
     7321 aggtatcaaa gatctcagct tttaggttcg acgaataata gggtggtatt ccattaccag
     7381 ttttgttgcg attgacaaat tgagcaggtg caggagaaac aaaacctctt tcgtatttaa
     7441 gataaagatt gcctgtgtca gagtatttaa agttaggggt gatttcaaaa gcaaaattat
     7501 tggtgttttt attggtatca aaaagggttg ttgagtctga tgggggtcgg ggtatgttca
     7561 tactcatttc atttctataa gatctatcgg tatcataagt gctaaattca tatctagctc
     7621 caccggataa agtaaaaaat tcattaaaat tatgagaatt aagagcaaaa atagaatgac
     7681 tttgtttagt catatccatt aaagttgtca tcctgtgata atttatgaca cctggaacac
     7741 tataatacac caaactcttt ctttttgcat catggtttgt aaattcataa ccaaaaataa
     7801 aataagaatt atttgcataa tttagtttgt tttttaaact tatccctgta agtgtgtctt
     7861 caaaaccgct tccattttga taagctgtag ttcccatcat agaaatttca tcttttagat
     7921 aatcgatctt ttgattttgc caaaaagctt ctaggttaaa ttcccatata tcatcaaaat
     7981 agtaatgata atccaaagaa atttcagggc gattgatttg tgtgatattg tcactattgc
     8041 ctttttgggt tggatcgctt tgagcttgtg cttttgttag atagccactg ctggtatttt
     8101 tgcttttaaa ataatcatac cccaaagtta aatcgctatt atcattgata tcaatatagg
     8161 tttttgtgtt gataaaataa cctttttcat tataaccttc ttgatatcca tcaaggttaa
     8221 aactttgtat atcaaagcta aaagctaaat tttcatttat ttgtttggcg ccattgatac
     8281 ctaaatttcc acctagtcca ccatgatcat aagcactgct ttttaaattt atagcaaaag
     8341 catctgattt ttgttttttt gtaatgatat taatcacacc ccctctagta ccacttccat
     8401 aaagcacaga tccaccccca ggtatgattt ctatgcgttc tacattatct aaattaatac
     8461 tatctagcgg ggttacacca tgggaattat caagaacatt aatagcacgc ccatcgatca
     8521 taacttttac agctatattg gatttatctc cttgtccacg catatctata ttgcgtccaa
     8581 gtccaaaatt tacaaagcta atacccgaaa ttctttctaa ggcttgttct aaggaaacat
     8641 aacctttatt ttgcagatct ttgccttcta tgctgattac attgcgtaaa tttgagtctg
     8701 catcttgctc aaaacctgtt gcactaacaa caactttttg tagattgata gcttcatttg
     8761 attcttgtgc atttaaatta gttattagca ataatgcaaa taaagataat ttaaaagctt
     8821 ttttatttgg gtgcaaattt tactccttaa ataaaataaa taa
//
LOCUS       DARBAC010000070         8639 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.070, whole genome shotgun sequence.
ACCESSION   DARBAC010000070 DARBAC010000000
VERSION     DARBAC010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8639
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.070"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..456)
                     /locus_tag="SB799_001222"
     CDS             complement(<1..456)
                     /locus_tag="SB799_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEG0868459.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVDIDAQILQKPFLPTDFLNLLNNKDTNKHT
                     SIDLPILSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDD"
     gene            complement(513..1280)
                     /gene="fliR"
                     /locus_tag="SB799_001223"
     CDS             complement(513..1280)
                     /gene="fliR"
                     /locus_tag="SB799_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEG0868460.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFS"
     gene            complement(1267..1902)
                     /locus_tag="SB799_001224"
     CDS             complement(1267..1902)
                     /locus_tag="SB799_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868461.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLALNTKDCIAIQGSSGCGKSTL
                     LHIFSSLLIPKKGEVFFKGSSLYQIDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQNLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDNKLASFCDKTYTINANGIC"
     gene            complement(1915..2988)
                     /locus_tag="SB799_001225"
     CDS             complement(1915..2988)
                     /locus_tag="SB799_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEG0868462.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSIINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSAEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(2988..3779)
                     /gene="rpsB"
                     /locus_tag="SB799_001226"
     CDS             complement(2988..3779)
                     /gene="rpsB"
                     /locus_tag="SB799_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEG0868463.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTMLFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAMSEEDFGEEQE"
     gene            complement(3895..5058)
                     /locus_tag="SB799_001227"
     CDS             complement(3895..5058)
                     /locus_tag="SB799_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0868464.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFHVGNQSAKFSLIFKE
                     KIPFLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQ
                     KQESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLK
                     EGEKLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQ
                     NYQDLEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNKVLDK
                     VREKYDEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
     gene            complement(5184..6308)
                     /locus_tag="SB799_001228"
     CDS             complement(5184..6308)
                     /locus_tag="SB799_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0868465.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFSVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGITANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKVALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(6305..7555)
                     /locus_tag="SB799_001229"
     CDS             complement(6305..7555)
                     /locus_tag="SB799_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEG0868466.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFITGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(7557..8060)
                     /gene="petA"
                     /locus_tag="SB799_001230"
     CDS             complement(7557..8060)
                     /gene="petA"
                     /locus_tag="SB799_001230"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEG0868467.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(8150..>8639)
                     /locus_tag="SB799_001231"
     CDS             complement(8150..>8639)
                     /locus_tag="SB799_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEG0868468.1"
                     /translation="WLIVLKIQGKKSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSE
                     ILVKSYTFLMQDKSGIFGVALISAFGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIY
                     AHLLGVNIGPKLTPIGSLATLLWLGVLARKGINISFWQYCKFGFLITLPVLVFSLFAL
                     IV"
BASE COUNT         3022 a         1674 c         1049 g         2894 t
ORIGIN      
        1 atcatcatca aaactcaaat cttccattcc ctctgaattt atatctaaag aattttcatc
       61 aggcaaatca tctaaattta aattatctaa atccaagctt atatcagcat aaggattttc
      121 atcattactt aatattggca aatcaataga tgtatgtttg tttgtatctt tattattaag
      181 taaatttaaa aaatctgtag gtaaaaaagg tttttgtaaa atttgtgcat ctatatctac
      241 attttgattt cgcggggcta aaaaaatcaa tctatcacat ttttctttaa gaatttttaa
      301 aggtgctgga gtatcactat ctacgacaat cacatcataa ttacccaaat tttcactata
      361 agcattaagt tcttcaaaat cataagacat ttttttagca ctaaggctta caagtcttga
      421 aactacaggg ttttcattta aaagtaaaat tttcatcact ttaatccttg aaaaataatc
      481 actattttac gataatttca tttatccttt ccttaggaga aaaaaagagt ttgcatatga
      541 gtgaaaagtt ctaaaattaa atttttaaaa tattgcatca taactaataa aatagcgatc
      601 aaaactacaa agcctaaagc tatctttata ggatagccaa taactaaaag attaaattgt
      661 ggcattgttt tcatcaaaag tccaaaaata acatcagcta aaagtgaaat tccaagtata
      721 ggaaagctca tagtaaaacc tatgatgaaa atattaaaca tacccatatt tagataatgc
      781 attaaattct catgcggata aaagccacct aaactgatat aacctaaaga atgacttaaa
      841 aacaaaagca ttaaatgatg accatcaaaa gcaagaaaaa acatcaaagc aagcaaattt
      901 aaaatttgag atgtgatagg catactcgtt ccagaacttg gatctaatat acttgccata
      961 gtaaatccca tagtaaaagc aatctgctca cctgccatca taataatagc aaaaataatt
     1021 tgaagcatta atcctgctat cattccaaaa atcacttcac taataagctg taaaacaaaa
     1081 aaactatcta aatgcaaaga ttctaatcta gccaaaggat ataaatacat agtcaaaaat
     1141 aaaactatag tactttttat caccatagga atagaattat gtgaaaaaaa aggaaaaaaa
     1201 actataagac cactcattct agcaagaagc aacataaaag ttacaacatt tttatcacct
     1261 aaataattaa caaattccat tggcgtttat agtataagtt ttatcacaaa aacttgcaag
     1321 cttgttatcg tgagttacaa aaaataaagc tgcatcattt tctttaacat aggatattaa
     1381 aagctcgata acatttttag cattatcaaa atccaaattt ccagttgctt catcagcaaa
     1441 aataatcttt ggttttttac aaagcacgcg cgcgatactc acacgctgtt gttgtccgcc
     1501 gctaagcttt cctatttttt gatgtaaaag cgtatcaata cctaatcttt ttaaaatttt
     1561 ctcatctaaa ttttgacccg ataaaacact agcaagttcg atattttcta aagctgaaaa
     1621 acctttaaaa agataatgtg tctgaaaaat aataccaaaa tcataacggc gaatttttaa
     1681 tctttcgttt tcatctatct gataaagact agaaccttta aaaaaaactt cacctttttt
     1741 tggaattaat aaggaagaaa atatatgcaa aagagtagat ttgccacaac cgctactccc
     1801 ttgaatagca atgcaatctt tagtatttaa agcaagattt aaaccctcaa aaagcggata
     1861 atcaaaacta tggcttaaat tttccgctct taagagttcc atttttaacc gtttttaaag
     1921 ttgtgcagca acttcagccg caaaatcttc agttttcttt tctaaacctt cgccaacttc
     1981 aaagcaaata aattcgacaa ttttaatttt tccgccaaat tctttttctt tttcagcgat
     2041 cacttgttct acggtttttt tatcatccat tacataaaac tgacccatta aagtaagttt
     2101 gctatcaagt tgagaattat ctgctataaa gctattcatt ttacctggga taatattatc
     2161 ccaaattttt tcaggtttac cttgagcttt aagctcttct ttgatttttt cttcagcttc
     2221 ttttaaaatt gcatcgctta attgtttgcg acttgcaaat tgaggaattt tatgttcagg
     2281 tttatttgga tctttaagtc tgcgtctttc ttcattttct ttttcaagtt cagcaaccaa
     2341 agctttgtat tcattttcaa caaaagtcat atccaaatct tcataactta aataacttgg
     2401 tctcattgct gcaatatgca tacaaatttg tcttaacaaa tctcttgatt ttgaagccac
     2461 ttcagcgcta tcacaagctg cagcgatcac aacaccaaca cggccatttg tatggatata
     2521 accatttaca acaccgttag cacctgcttt taaagttgca aatcttctta caactaagtt
     2581 ttctcctata gttgcaattt gactttttaa atattcttca aattttacgc cattgattat
     2641 gcttgaatga agttcttcca cactttgtaa gctattactt tgaatatggg ctgtggtatc
     2701 ttttgttaaa gcgataaact gatcattttt tgccacaaaa tctgtttcgg aattaatctc
     2761 acttacagtt gcacttgtaa aatcatcact tacttttaca cttactaaac cttctgcagc
     2821 aagtctatct gcttttttag cagccttacc taaacctttt tctcttaaaa gttgtactgc
     2881 tttatcaaaa tctccattag tttcactcaa agcattttta caatccatca tccccgcgcc
     2941 tgtactttcg cggagttctt ttaccattgc agcagtaatt tcagccatta ttcttgctcc
     3001 tcaccgaagt cttcttcgct catcgcttca tctaaaactt cttttttctc ttcatcggtg
     3061 atttcttttt cttcatttgc taaagcttcg ccatcttgtt ctcttaaagc ttttccttca
     3121 ttaatcgctt cagccatttc ttggcagaaa agttgcactg aacggattgc atcatcattt
     3181 cctggaatag gataagttac caagtcagga tcgcagtttg tatctagtgg agctacaaca
     3241 ggaattctta atctatttgc ttcttgaaca gcaatttttt cttttactgt gtcaataaca
     3301 aaaatcatat caggttgagt tttcatataa cgaattccac ctaaataagc taataatttt
     3361 tctttttttc ttgtaagcat taaagcttct tttttagtta aaagtttaat acttccatct
     3421 tcttccattt tttcaattac ttctaatttt ctaattgatt ggcgaatggt accaaaattt
     3481 gtcatcatac cgccaagcca tctatgattt acataaggca taccgcattt ttcagcgtat
     3541 tctttaatcg ctccacctgc ttgttttttt gtcccaacaa aaagcatagt ttttccttca
     3601 gcagcagcgt cacgaacgat attataggta tatctaaaat atcttaaagt tttttgtaaa
     3661 tcaattacat aaataccttt tctctcgcca aaaatgaatt ttttcatctt tggattccag
     3721 cgtcttgttt ggtgtccaaa atgcacaccg cattctaata aatctctcat actaaccatg
     3781 agtttctcct tataaattta gctttattcc tccacatccc ttaatttaca caagctaaaa
     3841 aggattgatg tgtgtgaaat gaagctaaga ttttatcaaa tttaagttta gtttttactt
     3901 atatatgtag tccttggtaa gacttagatt attattgatt tcttttgtga ttaaaaattg
     3961 aaacaaatcc acgcttccaa cacgaaaagc agaggcacaa gaacgaaggt acaaatccca
     4021 cattcttata aattcttcat catatttttc ccttaccttg tctaatactt tgttaaaatt
     4081 ttcatcccat aaatctaaag tttttgcata gtgcattctt aaactttctg ctaaaagaag
     4141 atgaaaatcc cactcgctca tagcacttac aacctctctt aaagaaggta aatatcctcc
     4201 tggaaaaata tatttatcta tccaagcatt tgtttttcct tcaaacatgg ctaaaataga
     4261 atgtaaaagc atagaacctc caggttttaa cacttgtttt actttcatga aataaagtcc
     4321 taaattctct ttacctacat gttcaaacat acccacagaa acaactttat caaaataatt
     4381 ttcaaattct aaatcttgat aattttgaag tcttatttct attttatctt caagaccaag
     4441 ttcttttact ctttccttag cttttttaca ctgctcctct gaaatagtaa ttccaacaac
     4501 cttaactcca tacttttgag ccgccataat agaaagccaa ccccagccac aacctatatc
     4561 taaaagcttt tctccttctt ttaaatcaag ttttttaagg gtatgttcta ttttgttaat
     4621 ttgagcttca taaagagtat tattaggctc tttaaaataa gcgcaagaat agctcatagt
     4681 atcatcaagc caaagcttat aaaaatcatt acctatatca taatgacttt taatattttt
     4741 actttcctgt ttttgggcta ttttactcaa gatatcctct gtatttttta aaaaacgctt
     4801 atttgaaaaa taatacaaaa ctttagctat ttcatcataa tcaccttcta tttctagttt
     4861 agactccata taatgttttg caaaaactaa actcgtatca ctaaataatt ttaaaaaagg
     4921 tattttttct ttgaaaatta aagaaaattt agcagactga ttacccacat gaaattcttc
     4981 ttgatcccaa aatacaattc taaaatttcc ataattccat tttgaaagaa taaatttaat
     5041 catttgtttt tcaagcatga catactccaa ttaataataa ttattattag atagtatctc
     5101 ttaattaggt ttaaaaatta ataaaaatga agaaaaaata agatttttgc cattatcact
     5161 aaataatggc aaaaaatgta atattaatgt aatttagacc aaacagaacg cttccaacct
     5221 atagcaaaaa tacttaaaat tacaaagaat atcattacat aaattcctgt agtttttctt
     5281 tcttctttct tgctatcacc cacttgatca atataagata caaccttagc ctgtgcagct
     5341 tctgttaaac ctactcttgg catagcggtt cctggaagaa gtttttgagt gttattaata
     5401 aaatcatgta aatattgctc accacgagat cttatcatca tagaaagatc aggcggaaca
     5461 gaacctaaat aagtttttaa atcattttga tttgatggag taaaaaagct atcgtatttc
     5521 atatcatgac aacgtccgca agcctcaata aaagttgctt tatctttagc aaattttata
     5581 tctttttcca ttaaagccac tttttgagca ctattttcca ttttagcata ttttgcctca
     5641 acatctttct taatagtagc atcttcattg gcttcaaatt taacactcac atctttaaga
     5701 taagcaatta cattggctat atttgcattt gtagcttctt cactttctcc tgaagtatct
     5761 ttattgtaag ctgtcataat aaaagcatca ccaaatttat gatctacttt taaagcaagc
     5821 gcaggatgca taatcaaagc agctaaaaat ttttcatcaa aaatagcacc agctgcacta
     5881 agatcaggtg gtattactcc catagaagaa tcagtaatat tagctgttat tccatcttct
     5941 tttacaccat gacatgcaaa acagttattt tcaaaaaatt ctttaccttt ttttgcatca
     6001 cccttagcaa aatcgatctt tgcaacatct gcccaaagtg tttcaacttt gcttaattct
     6061 tcttttgctt tttcaagttc tttgtttgca ctctctattc ttttagcatc tcctgaagct
     6121 tgtgcatctt ttagagctaa ttctttagct tcaactatac cttttgcaaa agtagtatct
     6181 tcaacagaaa aatcaaaatt tgcaggagca acatgaggtt tcatcactga atgagcataa
     6241 ggctctaccc cccaatatac aagcgcagta aaaactacca caactaaaaa tatttttatt
     6301 tctctcattg tttagctcct tttctctcca taatagtaat aaccggtaaa actacaataa
     6361 gtaaaagtaa aaatactata gaagcataaa atcctaccca agcatttaca cctgttggag
     6421 gtaattttcc ataaactgtt aaaacaatta aatcgataag caatatccaa aaccaaatga
     6481 aaaataaagg tctttcatga gccggtttta caacatcact tctatcaagc caaggaagca
     6541 agaagaaaat cacttgagca ataccaaatg cagccaaacc tatatcaaaa gctttaatac
     6601 ctgcaatatc aaagaaaaat cctcttaaaa cttcataact ccataagaaa taccactcag
     6661 gataaatatg agctggtgtt ttaagcgcat tagccggatc aaaattaatt ggatccattg
     6721 caaattcaaa tttaaaacag accaaataaa agaagaaaat cataaaaaag cttatataca
     6781 taaaatcttt tgataaaaat cctggccaaa aaggaatcac tttagaaccc tttgtgtcac
     6841 ctgccatgta tttttcagcc tctaaatcaa agtcaagttc ttcagaaatt tcattattaa
     6901 catgaggaat tcttaaagaa tagaagtgaa atgctataat agcaatgata actataggaa
     6961 gcaagcacac atgaagcata aaaaatcttg ttaaagttgg atcagaaacc gcataatctc
     7021 cacgaatcca aatcacaagc tcagggccaa taaatggtat ccctccaaaa agattagtga
     7081 ttacttgagc tgcccaataa ctcatttgtc cccaaggaag catataccca ctaaaagctt
     7141 cagcagaaaa tacaacaaac aaaagcatac cgctaaccca aatcatctca cgaccttttt
     7201 tataagaacc gtaataaatt cctgttagca tatgtatgta tataatcaaa aatacaacag
     7261 aagcggcaac accatgcatg tgacgccaaa gccatccata atccacctct tgcataatag
     7321 tcttattcac actatcaaaa gcaagcgcag tatctggttt ataatacatc acaagtaaaa
     7381 gtcctgtaat aaaaagcact gcaaatagag tggttaaaat aacccccatt gcccaaagaa
     7441 agttaatttg ctttggtatc caatacttta ccattaaaac atcaagcagt ttatgtactg
     7501 caagtctttg atcaagccaa tctacaaggc cattagcttt tctaatttgt gccatcttaa
     7561 gcctccgcta tcattttttt atattcagga ccctcttcac ctaaaacaag tttggttcca
     7621 tcaatcttaa aaggaggaat ttcaagaggc tttggaggag gtccaaagac attttttcca
     7681 cttgtgtcaa attctccacc atgacaggca catttaaaca attgctcact tggttggtaa
     7741 gcaggtatac aacccaaatg cgtacaaagt cctataacca cagtataagc tgcgttatct
     7801 accacaacat cacgtttttc atcttttggc atactcgcat ctttttttaa tataaaaata
     7861 ggctttttac gccattctat agttctaagc tctccatctt gcattcctga taaatctact
     7921 gtagtaaaac ctgcagcttt gacacttgga agcggatccc aagttttttt catcgcaaca
     7981 agcgagaaaa caccgcctac agcagctacg cttccaaatg caaagcccat aaagcttcgt
     8041 ctactctcag atgtagccat aacttgtcct ttcgatttta ttttttaacc aagttaaaag
     8101 tttatcgaaa ttaaaataaa ttttttcttt gtttaacaag ttttgatatt tagacaataa
     8161 gagcaaaaag agaaaaaaca agcacaggta aagttatcaa aaagccaaat ttacaatatt
     8221 gccaaaaaga aatattaatg ccttttctag ccaaaactcc aagccaaagc aaagttgcca
     8281 aagaacctat tggggtaagt tttgggccta tatttactcc taaaagatgc gcataaatca
     8341 tcaaagaatc aaaagaaaaa ttctcaaaat attcttttaa tgccaaatct ccgattaaaa
     8401 ccataggcaa attattaaac acagaagatc caaaagccga aatcaaagcc actccaaaaa
     8461 ttccactctt atcttgcatc aaaaaagtat aacttttaac caaaatttca ctcacaccta
     8521 ttttatgtaa agcaaaaact accatataaa gcccaaaact aaaaagcaaa actccataag
     8581 gtgcttcaaa aagaatttta atactttttt taccttgaat ttttaaaaca ataagccaa
//
LOCUS       DARBAC010000071         8569 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.071, whole genome shotgun sequence.
ACCESSION   DARBAC010000071 DARBAC010000000
VERSION     DARBAC010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8569
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.071"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..567)
                     /locus_tag="SB799_001232"
     CDS             complement(<1..567)
                     /locus_tag="SB799_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868469.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLALLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVY
                     DLQGFLSKFEENLLSEISQIKEVVLSFKT"
     gene            complement(564..1085)
                     /locus_tag="SB799_001233"
     CDS             complement(564..1085)
                     /locus_tag="SB799_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEG0868470.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSDDLKVQALLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            complement(1072..1674)
                     /locus_tag="SB799_001234"
     CDS             complement(1072..1674)
                     /locus_tag="SB799_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868471.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            complement(1671..1772)
                     /locus_tag="SB799_001235"
     CDS             complement(1671..1772)
                     /locus_tag="SB799_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868472.1"
                     /translation="MSKALEYLIVIGLVVAAAITAWSVLTVNHLHIG"
     gene            complement(1769..1990)
                     /locus_tag="SB799_001236"
     CDS             complement(1769..1990)
                     /locus_tag="SB799_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HEG0868473.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLAILVVLTIWGLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            complement(1987..2850)
                     /locus_tag="SB799_001237"
     CDS             complement(1987..2850)
                     /locus_tag="SB799_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0868474.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSRGE"
     gene            complement(2850..3113)
                     /locus_tag="SB799_001238"
     CDS             complement(2850..3113)
                     /locus_tag="SB799_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HEG0868475.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYWYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            complement(3118..3783)
                     /gene="ccoO"
                     /locus_tag="SB799_001239"
     CDS             complement(3118..3783)
                     /gene="ccoO"
                     /locus_tag="SB799_001239"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEG0868476.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDTENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            complement(3796..5262)
                     /gene="ccoN"
                     /locus_tag="SB799_001240"
     CDS             complement(3796..5262)
                     /gene="ccoN"
                     /locus_tag="SB799_001240"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEG0868477.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            complement(5388..6068)
                     /locus_tag="SB799_001241"
     CDS             complement(5388..6068)
                     /locus_tag="SB799_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEG0868478.1"
                     /translation="MSQECKELIILVVEDEIKTRESLINVLSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDCLVGEKIEANMLVKISEEYQFNKTKRTLIHNGKEIVLTKK
                     ELAFISLLLKQPGVLVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            complement(6071..7282)
                     /locus_tag="SB799_001242"
     CDS             complement(6071..7282)
                     /locus_tag="SB799_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEG0868479.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIVYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFEAIEKNHV
                     NINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITITFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EVFLKLKERVE"
     gene            complement(7279..7938)
                     /locus_tag="SB799_001243"
     CDS             complement(7279..7938)
                     /locus_tag="SB799_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEG0868480.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYHLFRIFAYIALGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFIKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     KGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGMNLAYIGFKAF
                     Q"
     gene            complement(7935..>8569)
                     /locus_tag="SB799_001244"
     CDS             complement(7935..>8569)
                     /locus_tag="SB799_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl phosphate synthase small subunit"
                     /protein_id="HEG0868481.1"
                     /translation="KNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVE
                     VGFEVEVYPYNVKADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPM
                     LGICLGHQLLSNAFGYATYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQV
                     AHITHRNLFGDNVEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
BASE COUNT         3044 a         1586 c          977 g         2962 t
ORIGIN      
        1 tgttttaaaa cttaaaacca cttctttaat ctgagaaatt tcacttaata aattttcttc
       61 aaatttactc aaaaaacctt gcaaatcata aactatagct tcatactcat ctaaaaaatc
      121 tttattaaga gtgtaatttt taggtaaaga aagatcatca taaaaagaat ttttttcaag
      181 caaagcaaga taattcttat atacctcatc taaaatttcc aaatgttcat tataggtagc
      241 ataataatca ttgtttttaa gatcttctat gctttttttt tctaaactaa gttctttaaa
      301 aaaagaaaaa agatattcgt tatttttcaa aaaagcaaaa aattctaccg aaattcctag
      361 ttttttttct aaatccttac tttttagaca agcttcttgc attaaaagca aactttcata
      421 agaacttgcc ttatgaaaat tgctcaaaca aactttatct aaaaattcac ctatatgaat
      481 agcactatct aataaagcat tttgctgttt tttttggtta taatactctc taatttgtct
      541 tgaagaacta aaaattctta atttcattga gcatttaatt cgtagctaaa aaaacccact
      601 gtttcttgat ttgcataaaa ctttagctta agctcccatc tacctttatc tagtttaggt
      661 aaagcgatac ttaaaattcc atttttaact tgtccttcta acttttgatc aaaattttta
      721 gtgaatggtc ttgtaagaag agcttgaact tttaaatcat cagaatttat attttgtaat
      781 gcagaaattt taaaatttgc aacataggaa ttttgatcca cttcataact aggaattttt
      841 cttttaccaa taaaagtgat tttatcattt tgaaaattta ctttaaaaaa tttatcaaaa
      901 tttacttgtt gtttttgtat ttgattgtaa ttattttcaa cattttgata agagtcaaaa
      961 taaaaatcat cctcatacac aggatggtga cttgctataa aaatcgttac aatacaagca
     1021 ataattatag ccaaaagtga aagcaaaata ccataaggcc aaaaactttt tttagtttct
     1081 aacatttttt ttcctcttta ttcttctttg tgcatagtat aacaatgcaa agcaaataaa
     1141 tccatagata agtattctta agatattgat agtatcacga tttgcattgc ctatagaatg
     1201 ttctaattgt aatcccaagg attttgccac acgatctaca atatctgcat aaccattaag
     1261 tatagcagca ttataaatat cacctttatt tgtagctaat atcggcaaaa tagatcctgt
     1321 tccaggataa ggactaagta cagcttcttt atcaatcaaa gctaaagcac cttttgagcc
     1381 cactatatca actttgtgag aattttttga caaaagaagc aatatataag attgaggaag
     1441 ttctttttgt ttatttagta aagtttcaat ttcagtttta tcaccaacca taacaccgat
     1501 aaaaatatta cttttttggt aaagctcttt tcctataaga ttaatctcat tacttacttt
     1561 ttgacttaaa atattttcat taaaaagtac agcatcaaga gcaaaaaccc tagaaggcaa
     1621 taaaacaaag aagaagatgg ctaaaaaaaa accatcttgt aatatttttt tcatcctata
     1681 tgaagatgat ttacggtcaa aaccgaccaa gcggtgattg cagcagcaac aactaaacca
     1741 ataacaatta aatattccaa agccttactc attgtgcttc ctttatactt ctatgatctt
     1801 gttcttttga accaaacatc tttacacttt gtacatcttt aagactatat ggcttttgca
     1861 tcacttcttg ctgagcttta agaccccaaa tagttaaaac tactaagata gcaagtaaca
     1921 aaaccgtagc aattaacata cctgtaacac ctgaaagaga aaacacgcat ctattattat
     1981 tttccatcat tcaccccttg aaagagaaat tacatactcg ccaacagctt ctttttgaat
     2041 atcattaagt gttggaaaac tcggcattgt tcctataaaa ccagccttac cactatgtaa
     2101 aacatctact acaaaagctg cagaaccgta ttttgtaaga tctgggaaca ttccatcttg
     2161 accttttcca tcttctccat ggcatgctgc acaagttgca taagcttctt taccttttgc
     2221 tactaaattt tcatttgcag ttttcttaat agctgaaaga tcttttgcta cataagcagc
     2281 aatagcaggg atatcttctt ctgccacgcc taaatcagca gcaccaagca tttctccacc
     2341 tggaaaattc ataccttttg aaccatgttt aattacattg attatacctt cttcgctacc
     2401 ccaaatattt aaattttgag ctttaccatt gataccatcg cctgtaattc catgacaagc
     2461 tgaacactga actaaaaaga tattttgacc cattgctatt ttatcttcag gagataaatt
     2521 tttaaatttt tcttcgaatt ttgtattatg agttgctact tcttcattgt attgacctat
     2581 acttgaaaaa gaatttaaag gatatcccca tagaaaatac caaatagccc aaacaatagt
     2641 caggaaaaat accacagccc aaccagtagg aacagcattt ttatactctc ctattccatc
     2701 ccaactatgt tcactaagct ctgactcgcc ttttttttct ttcatttgct taaacattct
     2761 acccacaata actagtgtga ttaaaatgat aagaatagct ccaattaaag ataagagatt
     2821 aacattatct tctaaattta accattgcat taagcactcc ttttactttc taatacacta
     2881 tcatcaatat catcttttaa ggcaaggttt gcataatttt cataatttct ctcgcctttt
     2941 ttttctgttc tatataaatg ataccaatac gcatataata ctattgacaa aaacatcacg
     3001 agtgcaaaaa aaccataacc ttggaaaatc tcccactcat gtttttgaac tgttgctaaa
     3061 tcaaatgtga ttaaattttt aatcacatca aaaactattg ataaatgttc catcatctta
     3121 ctttaagcta tttaaataag cgatcaaagc aactatttct ttgatttcac ctttagcaaa
     3181 agcatctttt acttcttgat ttttcatttg atcaactata gcctgagctt cagcttttac
     3241 ttcagcttgc gcatcctccc aagaaccaag ttttgttcca ttttctgtat cataaggaac
     3301 attgaaaact tttttcacag ttaaagcctc agcataagca gtttcaatat ctgcattatt
     3361 tttaaacata tgcttatatg aaggcataat agaatctgga acaacagaag taggatccca
     3421 catatgattt tcatgccaat cagccgttct ataatttcct acacgagcaa gatcaggtcc
     3481 tgttcttttt gaaccccaaa gaaaaggtct atcataagca aattcaccac ttacagaata
     3541 cataccataa cgatctgttt ctgatttaaa tggacgaata agctgtgaat gacaagcatt
     3601 acaactatct ttaatatata ctgcacgccc tgcaagttgt aaaactgtat aaggtttttt
     3661 accttcaatt ggtcttgcat tttctgcaaa atttggcaaa acttcaacta tgcctgcata
     3721 agcaatcact acaaaaacag ctacagcaaa aaagaatgga tttttttcta accaactaaa
     3781 catattttct cctttttatg ctgccatagg cgaagcgctt tttggttctt tatcaagcac
     3841 tcttccacaa gcaattgttt tgtaaatatt ataagtaaac ataaagaaac cgataagata
     3901 caacaatcca ccaatcgctc taatccaata ataaggaaca atagccacaa cagtatcaat
     3961 aaagctataa agcaagttac catactcatc tgtcgctctc cacatcatac cttgagtaat
     4021 acccgcaatc cacattgaag caaaataaag aactatacct gtggtttgaa tccaaaattg
     4081 agcttccatt aaagatttgc tataaagctc tcttttgaaa actctagggg tcatatgata
     4141 aagcgcagcc atagtcataa atcctaccca acctaatgtt ccatcatgaa catgtcctgg
     4201 aatccaatct gtaaagtgtg ctaaagcatt aacagattta attgaaagaa ttggcccttc
     4261 aagtgttgag aacatataga aagttgatgc caaaatcata aatttaatca atggactctc
     4321 gcgaagctga ctccactcac ctttcatagt aagcaatata ttaatcgctg aaccccaaga
     4381 aggtaaaatc aatactacag agaaaaccga acccatagtt tgcatccaat caggtacagt
     4441 tgaataaatc aaatggtgac cacctgccca aagataaaca aacattaagc cccaaaatgc
     4501 aaataaagag agtttataag agaaaatcgg ctgaccactt tcttttggca agaagtaata
     4561 aatttgagca ataataccca cagtaaatac aaatgccaca gcattatgtc cataccacca
     4621 ttgtactaaa gcatcatttg ttcctgcata cattgataca ctatgccacc atttacccat
     4681 tccagtaaca aaataagttg gtacttccat gttgttaaaa agataaagca tagctatacc
     4741 taaaaatgta gctatataat accatagaga aatataaaga gttttttcac ggcgaattcc
     4801 aataagtcca aaaatactta caccccataa aacccaaaca agaacaacaa gaatgtctaa
     4861 aggccactca agctctgcat attctttaga tgtagtcaca cccataaaca aagatataac
     4921 agctaaaacc atagtaagca tataaagcca aaaatgaagc ttaccaacag ccattaaaaa
     4981 tcttgactca gccatactca ctttaagaac acgctgacct atataatacc aagttgccca
     5041 aatccctgaa agcataaaac caaaaatcac acctgaagta tgaagtggtc taagtcttga
     5101 aaaagtggca tattctcctg ctaaataatt taaattagga tatgccattt gaaaagctat
     5161 aagagttcct atagccatac caacaatgcc gaacaatatg gtcgcaaaca taaaatatct
     5221 tgcaaccgta tagtcgtaat ttaatacatt acctggatgc atcgactttc tccttaaaat
     5281 ttttgataac aagagaatat tatagaatat taattataca ttttttctta aaaatgataa
     5341 ttttgttaat catttgttat gctttatatt ttaaggctaa atcagtctta tttattgata
     5401 tttatcttat aacctaaact tggcacattt tttataaaat cttcacccac tttatctctt
     5461 actcttttta taaatgttcg aacagcagta tcgctcacat gctcacctat ccaaacattt
     5521 ttcttaatat cttcatgcaa aaccaaaacc ccaggttgtt ttaaaagcaa agaaataaaa
     5581 gccaattctt ttttagttaa aacaatctct ttaccattat gaatcaaagt tcgtttagtt
     5641 ttgttaaatt gatattcttc ggaaattttt acaagcatgt ttgcttcaat tttttcacct
     5701 actaaacaat ctaagacttt gaataattct tctatatcaa caggtttaat taaatattta
     5761 tctataccga tatcaatgga acgcaaaagt ctctctttct ctgaatacgc actaagaaca
     5821 acaattggga catcatctga aatttcttta atctctcttg ccatatccaa tccatccata
     5881 ataggcatag caatatctgt gataactaaa tccggtttaa attttttaaa ttttttaagc
     5941 ccttcatctc cattttgagc tccgattact ttactaaagc gttcgcttaa tacattaatc
     6001 aatgattctc tagtcttaat ttcatcttca actactaata ttatcaattc tttacattct
     6061 tgtgacattt ttactctacc ctctctttta gctttaaaaa tacttcaaaa caagccccat
     6121 cttttccatt cttaactttt atttttcctt ggaaactttc gataatttgt ctacttatat
     6181 aaagtcctac tcctataccc tgactaggat gttttgttgt aaaataaggt tgaaaaattt
     6241 tatctaagtt ttctttatca atcccaccag cattatcttt tattgtaatt ttcagataat
     6301 tttttccaaa ttttgaaaaa gttattgtta tgatttttct ttttttgttt ttaaatgctt
     6361 ctattgaatt taaaatcaag ttaagaaaaa ctcttattaa accattctca tatgccaaaa
     6421 cttcataatc acttttcgaa acaatattga tatttacatg atttttttct atagcttcaa
     6481 aagcaatttc taaggcttta tttaaagtct cttttataaa tacacactgt tctaccccct
     6541 tattaaacaa agttctaaac acatcaattg tttctgacat atttttaatc atatcttttg
     6601 attgtgaata aatctcagca aatccttttt catctttaag attttgtttc atttgaaaca
     6661 tagcaatacc aagctcattt aacggttgcc tccattgatg agctatatca ctaatcattt
     6721 gctctaatga agatttcaaa atctcttcat agactatttt aatatctttt tcattttttt
     6781 ccaaggcaat ttgcattttt ttctcaaatt ttttacctaa ctgtataaat tcctgttggt
     6841 gatttttaac tgtattttca agattaatac ttaattctct taatttagcg tgatttagag
     6901 caagctcttc attaagctta aaagaattac taacatcatg agagaatgct actatttcta
     6961 ttaattcatt atttttatcc aatatgggga ttaataaagt ttcaagatag aaagttttgc
     7021 ctaatttatc aatattttta aaaataactt gataaggttt tttatatgaa agttttttta
     7081 aaagttcttc aatataacat tcctcaacat ctggatgttt aaatattgaa tgtttttttc
     7141 ctataagctc ttttttacta tatccactta tttgacaaag cttatcactg acaaaaatta
     7201 aatttccttg aacatcagct cttgaaaaaa ttgtattttt ttcaagagct ttaaaaaact
     7261 gatctttaaa aaaatctttc attgaaaagc cttaaaacct atataggcaa gattcatacc
     7321 gtaacaaaca ataacgccat acgataaata attaaacaaa tttttcaaaa aatcactaaa
     7381 aaactgtgaa attttagaaa aaaataacat cgcaggtaaa gttgatatcc caaaaatcat
     7441 cattaccaaa atacctttaa aaatattttg cttactcatt gcattggcta taaaaaaata
     7501 caccaatcca caaggaacaa aaccatttga aaatcctaaa aatatggctg attttaatcc
     7561 tttaaaattt ttagattttt taataatttt ctttataaaa ctatcaaaaa aaacattatt
     7621 ttcaataaaa gataacatat tgcctctaaa aataagagca aaacccaaaa tcatcataaa
     7681 tataccaaga ataaaaaatg acaaactttg aaccttagca ttgattgcta agatattccc
     7741 aaaagttcca aaaattatcc ctaaagcaat ataagcaaaa attctaaaca aatgataaat
     7801 aaaagttaat aaaaataaat tattgctttt tgaattcaaa tttataaaaa gtaaattaaa
     7861 accaccacac atagaatagc agtgtccaaa actagataaa aaagcaacgc tgataatagc
     7921 taaaaaatct atactcacat caaattcata aattctttaa aaatatactt gctttcatga
     7981 gggcctgaag aactttctgg gtgatgttgc actgaaataa taggatagtc tttatatctt
     8041 actccttcaa cattatcgcc aaataaattt ctatgagtga tatgagccac ttgagctaat
     8101 tcttctggaa cattataatt atgattttgt gcggtaattt ctaccgtttt tgtatcaaga
     8161 ttgatcacag gatgatttgc tccatgttgt ccaaatttca ttttataagt tgcatatcca
     8221 aaagcattac ttaaaagctg gtgacctaag caaattccaa gcatgggaat tttagcttct
     8281 gcaagttttt taatctctgc aatctcttgt tttaaaatcc ttggctcacc tggaccatta
     8341 gaaagaaata cgccttggat ttcacctttt ttatacagag taatcaactc atctgcttta
     8401 acattatatg gataaacttc tacttcaaaa cctacttcta caagttcatt taggatattt
     8461 gttttaacac cataatctat aacagcaact tttttctcac ttcttttagc atcattaaat
     8521 ttttgaaaac tagcgttcca aacaccttgt ttatgagaat aatttttct
//
LOCUS       DARBAC010000072         8267 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.072, whole genome shotgun sequence.
ACCESSION   DARBAC010000072 DARBAC010000000
VERSION     DARBAC010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8267
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.072"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            35..1171
                     /gene="pseA"
                     /locus_tag="SB799_001245"
     CDS             35..1171
                     /gene="pseA"
                     /locus_tag="SB799_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HEG0868482.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
     gene            1168..1773
                     /gene="hisH"
                     /locus_tag="SB799_001246"
     CDS             1168..1773
                     /gene="hisH"
                     /locus_tag="SB799_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEG0868483.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAINFIAKNPKDLQKADKLLLP
                     GVGSFKEAMKNLKEFGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQVPLYQGIDNKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFARL"
     gene            1774..2520
                     /gene="hisF"
                     /locus_tag="SB799_001247"
     CDS             1774..2520
                     /gene="hisF"
                     /locus_tag="SB799_001247"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEG0868484.1"
                     /translation="MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNV
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGGQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(2485..2958)
                     /gene="pseH"
                     /locus_tag="SB799_001248"
     CDS             complement(2485..2958)
                     /gene="pseH"
                     /locus_tag="SB799_001248"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HEG0868485.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDINQFMKTKYIDFKEHLRF
                     LKKLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPNLKGVGQILMNEIIK
                     YAFENLKVNTLKAYVFKDNRKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(2955..3779)
                     /gene="pseG"
                     /locus_tag="SB799_001249"
     CDS             complement(2955..3779)
                     /gene="pseG"
                     /locus_tag="SB799_001249"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HEG0868486.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYDDVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            complement(3763..4461)
                     /gene="pseF"
                     /locus_tag="SB799_001250"
     CDS             complement(3763..4461)
                     /gene="pseF"
                     /locus_tag="SB799_001250"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HEG0868487.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAVVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKDILKQAYEKFIQNQSKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            4541..5757
                     /locus_tag="SB799_001251"
                     /pseudo
     CDS             4541..5757
                     /locus_tag="SB799_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            complement(5771..5992)
                     /locus_tag="SB799_001252"
     CDS             complement(5771..5992)
                     /locus_tag="SB799_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEG0868488.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLIDLAKLD"
     gene            complement(5992..7053)
                     /locus_tag="SB799_001253"
     CDS             complement(5992..7053)
                     /locus_tag="SB799_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEG0868489.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLKTRYICDKNTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSLDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLVCGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            complement(7043..>8267)
                     /locus_tag="SB799_001254"
     CDS             complement(7043..>8267)
                     /locus_tag="SB799_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEG0868490.1"
                     /translation="SLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSK
                     LNNKALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKT
                     LQEKIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDVRMINWEPKGENIL
                     KIAKKFNINTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKE
                     DQIRAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIA
                     NYTRLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRAL
                     GRKLETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKEIEKNSALV
                     SFQNLNFKGLIIHEN"
BASE COUNT         2781 a         1170 c         1369 g         2947 t
ORIGIN      
        1 gcgatatata tttaagacta attaaaggaa atttatgaaa ttttgtaaaa aatgtgtgat
       61 gccagatact aagcctgatt tacattttga tgaagaaggt gtttgtgatg cttgtcgttc
      121 tcaagaagct aaaaatcaaa atattaattg gcaagaaaga gaaaaagaat tttttgagct
      181 tataaaaaaa tacaaaaaac atcctgttta tgattgtgtt atcggagtaa gtggcggaaa
      241 agattctact tttcaagtgg ttaaaatgct tgaacttgga cttaatcctt tgtgtgtgtg
      301 ttttgagcct agcgtaccta cgaaaatagg gcgcaaaaat ttagacaatt taaatcatct
      361 tggcgtggat ttgatccata tcaagcgtga tccaaaagtt tatcaaaaac ttgcccgtga
      421 agcttttata agaacagggg ataatgagtg gcaaaaccat ttgggaattt ttacttctgt
      481 tccacgcata gcggtaaatt ttggagtgcc tttgatcatc tggggagaaa gtccgcagat
      541 agagtatggc ggtcctgcga gtagtaaaaa taaaaatatt ttaggcagag agtggcttga
      601 agaatttggc gggcttttag gaaatcgtgc ttctgatatg cttggggtaa atggtatcac
      661 tgaaaaagat ttgtttttat atacttatcc aagtgatgaa gaacttcaaa gagtaggggt
      721 tactgggcta tttttagggt attattttaa atgggattat aaaaaaattc ttgaaatttc
      781 taaaaaatat ggttttttaa ctctagatca tcctgttgag actacttatg aaaattttga
      841 aaatttagat tgttattcta atcatgtgca tgattattta aaatactgca aatacggctt
      901 tggtagagca acggataatg cttgtttgga tattcgttta ggttatatca gccgtgaaga
      961 aggggtgcgt ttggtacaaa aatacgatgg caagccccct aaaaaggcta ttaaaaaata
     1021 ccttgaattc agtggtttta gcgaggaaga atttcaaaaa atagtagatt cttttaccaa
     1081 taaaaaaatt tttaaacgtg atgaaaatgg taaatttata agagattatg atggttcttt
     1141 ggtaagaaaa gacgagtgtg ttttaaaatg atagcgctca ttgattacaa ggcgggaaat
     1201 ttaaactctg ttgctaaggc ttttgaaaaa ataggagcta taaatttcat agctaaaaat
     1261 ccaaaagatt tgcaaaaagc agataaattg cttttacctg gagtgggatc ttttaaagaa
     1321 gccatgaaaa atttaaaaga atttggtttt atagaagctt taaaagagca agttttagta
     1381 caaaaaaaac ctattttagg catttgtttg ggaatgcagc tttttttaga aaggggctat
     1441 gaaggtggag tttgcgaagg acttggtttt atagaaggtg aagtagtcaa atttgaagag
     1501 gatttaaatt taaaaatccc acacatgggt tggaatgagc ttgaaatttt aaaacaagtt
     1561 cctttgtatc aaggcataga taataagagt gatttttatt ttgtgcattc tttttatgtg
     1621 aaatgcaaag atgagtttgt aagtgctaaa gcacaatacg gacataaatt tgttgcatct
     1681 ttacaaaaag atcatatttt tgctacacaa tttcaccctg aaaaaagtca aaatttaggt
     1741 ttaaaacttt tagaaaattt tgcaaggctt taaatgttaa aaactagaat tatcccttgt
     1801 gttttgttaa aaaacggaca acttgttaaa agtatagaat ttaaagattt tcgcactata
     1861 gggcatttaa cttcaacaat gagaatttat aatgcacgca atgttgatga gcttattatc
     1921 ttagatatag atgcttcaaa aagtggagaa atagattttg aaagtataga agatcttgct
     1981 aaagaatgtt ttatgccttt aactataggt ggcgggataa aaacccttga agatatacaa
     2041 aagattttaa atttaggtgc ggataaaatt tctatcaatt ctaaggcctt agaagatatg
     2101 gattttataa gtaaagcggc taatcgtttt ggttctcaat gtatagtttg ttctatagat
     2161 gttaaaagaa aaggagggca attttgtgtt tatgacaggg gaaatttact tgaaaaaagt
     2221 cctttagaac ttgctttaga atatgaaaaa aaaggagctg gagagcttct tttaacttct
     2281 gtggattttg aaggaagggc aaagggttat gatttagaac ttttaaagat ctttcaaaat
     2341 aaacttaaaa ttcctcttat tatcaatgga ggacttagca atccaagtga tggagttgag
     2401 gctttaaatt taggtgctga tgctttagcg ggtgcttata tttttcattt ttctaagtat
     2461 acccctaaag atgtaaaaga agaattagct aggcaaggct ttgcagtcag attgctttag
     2521 gcaaatatgg taaaaatctt tatcttcatc ataaatagta aaatgatttt gttgatataa
     2581 ttttaaagct ttgcgattgt ctttgaaaac ataagcttta agagtattta cttttaagtt
     2641 ttcaaaagcg tattttataa tttcattcat taaaatttgt cctacgcctt ttaaattagg
     2701 ttttgcgtaa agtccaaatt cgcaagattt agttgtgata ttgacaaaat caattacgcc
     2761 gataatctgc tcatcttgaa aaactaaaaa atattttttg ctagaatctt gatgtaattt
     2821 ttttaaaaat cttaaatgtt ctttaaaatc aatatatttt gttttcataa attgattgat
     2881 atcggggtga ttgcgccatt taaaaatcag ctctatttct tgagaattaa gttctgtgaa
     2941 atttttaagt tttatcaata cttatactcc acttcatacc cttttttagc aagccaagtt
     3001 gctgtagatt cttgattttt aacataacaa atagctttga aatttgcctt taaaagcaag
     3061 gcttcattga ctaaagaact tgcgctgatg atgagtttat tgctttcatt catcaatttt
     3121 gcaatatttt catgatcgat aaataatcta atattgttat gtaattttgc aaatttttgc
     3181 aattttttaa gattaggatt agaagagctg gttgcaatgc tgatgatttt tgttttaggt
     3241 aattcgctag caatttgtaa agaaaggttt tttatatcag ttccacccat gcaaatgaaa
     3301 aaatcatatt ttttttctct attttctttg gcctcttgat aaaattcttc cctgattaaa
     3361 gcataagaaa aaccacatct tacttcgcat ttaaaaggca ctaaaccttc ataatcactt
     3421 gcttttgcat aggcattgac attgagtaaa atatcacaat gatgaggctt tatttcatca
     3481 tcaaagctta gaattttcac ccctgtttca agcttaatca gtttttcatc atctacgctg
     3541 atgccatagt gatcaatgat aagaagttca aatttttctt ctttgatgag attgataagc
     3601 tcgtagatac tttcgctact aagctcataa acaggataag gaatttcatc gatcaaggag
     3661 ccttctaaag gcaagcaagc aaaacttaca tcatcatatt gtttagctaa gactagatcg
     3721 cgtttaatgt gtccaaagcc tatttgactg gagctatcgc ttctaaaaag cactttcatg
     3781 atttacctta taaagtattt ttgcaaattc caaatcttgt atggtgtcta tatcgcaaac
     3841 taaatttctt ggcaatacaa acacgctaga atgaggttta aatataaaat cttcctcaag
     3901 ccaagctttg cttgtaccaa aataaaaagc tcctgcatca tgataagctt ttgttagatc
     3961 ttgtgaacga cttttataat gtttttcatc aaacatataa acttgattgt tttcatttag
     4021 ataaaatgcc ctttgtatag gatactcaaa ctcagtagca gcaaataaaa acttgctttg
     4081 attttgtata aatttttcat aggcttgttt taaaatgtct ttatttaaca aaggagcagt
     4141 agcataaagg cagcagacat gatcataaat ttgattttgg ctttgtaaaa tttctatggc
     4201 attttgcact acagcagtgc ttgaagcata atcatcgctt aaatttttat cacgtacaaa
     4261 aggagctttt gcaccgtatt ttaaggctac ttctatgatt tcttcatcat cgcttgaaag
     4321 caccacttca tcaaaaatac ctgaatttaa agcattttct atgctataag cgattaaagg
     4381 tttgcctagg aaatcaatga tattttttct aggaattctt tttgatccac cacgagcagg
     4441 gatgatgcaa agatttttca tagttaagcc ttgttttttg tgttttattt tactaaaatt
     4501 taagtataat tgtctttaaa atacaataaa aggcttaaaa ttgcttataa accaaacctt
     4561 tgaaattgat tcttgtgatg atgtagaact aggcattaaa agaactagta agcttgaata
     4621 ccgcattagc tatgatgatg aaaaagatct caaagctata gtttttgtca taggaggtta
     4681 tggagctaat gcaaatattt cttttttaga ttttgatagg gaatatattg ctaaaaattt
     4741 taacgttgta gcggtgcatg ttttttatca ttgtttttgt gcaagaatat caaataataa
     4801 aaaatatagt gcttctatta gcttcatgga ggaggatttg ttaagtctat ctaagatttt
     4861 gttagatttt ggcattaatc cacagaatct tgattgtaaa aattctacca agtattatga
     4921 attgcttaat cagcatatta ttactttaaa atcacaagga aaattagcgc aaaattatca
     4981 agcgaaattt acttcaactt ttatcccacc cagtggagat tatcaaaact atggcattat
     5041 ggcagctatt gatcatatca atgctttaaa agatttagtt aaacgttttc cagaatttgc
     5101 agatttacca aaaatttatg ggggggggtc ttatggagga tacctatctt tactcatagc
     5161 aaaaatagct ccttggtatg tggatggcgt gattgataat tcaggaactg ttttgccatt
     5221 attggaatgt ataataggaa aagatttaag tagacccgaa ttttttttag tgatttaaat
     5281 aaattggtag gcatgtttat taaaacgtac tggactagag aagatgaaag attatcttat
     5341 ttttttacta atgaaaatta tatgattcgt tctttgttaa attcttccca tttaactata
     5401 caagctaata ttaacaaaaa tattatttta gtatcttatc atagtttaaa agatccattt
     5461 aatacagcaa aagataaaca aactcttttt ttagcatata aagagctagg atatgacgcc
     5521 actttacatt taataaaaga tgaaagcgag attgatggaa gatttataaa ggacttaaat
     5581 catggtatga ggattgctga taaagcctta tttagaaaag aacttccttt aatgcttgaa
     5641 aaattgcaaa aaagaaaatc tttaatgcaa gaaaattcca tctcttatcc ttgtggaaat
     5701 aaagtgttta cttttaaaga tgtgggagat aaatttgaat taacgataaa agattaaaac
     5761 tttaaaggtt ttaatcaagc tttgctaaat cgattaaatc actcactttt tgacaatttt
     5821 tcaagtcctc ggctgtgatt tttaaagcaa aaagattttt ataaagcacc atcacagata
     5881 caaaagccaa actatcccac tcgtctatat catcaagtag catatcttca tttaagtctt
     5941 catctctatg catagcttct ttaagctctt ctaaaaattc agtttttgtc attatttctc
     6001 ctttgtgtaa attaaaatat cttttgtgta taaatccttg aaatttagca ccgcacttcc
     6061 ccagctaagc cctgcaccaa aagcacttaa actcgcttta aattcttttg gagtatctag
     6121 ttcgcaaagt agagcaggta gtgaacaagc gcttaaatta gcgtattttt ccatgatgaa
     6181 attaggaact ttatcatcat taagttttaa ctcttcttta atacaatcaa ccaaatacgc
     6241 attagattga tgaaaaagat gaaaagcaat gtctttttct tctaccttgg aaaattctaa
     6301 aatttcttta aagcttttag gttcgcattc taaagccata ttaaaaatat ttgctccgtc
     6361 catgtaaaga ttttctaatt gtctaaactc ctcagtttgc atgagcgaat catcgttaaa
     6421 aatatctgct ttaggtattc tcatcgcacc ttttggaatg atgagtttat caaaatgtct
     6481 tccatcgctt ccaagttcaa aaaaggcttc attaaaatcc gttttttcaa tcaaagttgc
     6541 acttactcca tcgccaaaaa ttggggctaa attcatattt ttaggatgga tgaatttgct
     6601 taaagtatcc ccacaaacga gcaaaatttt acctaagcca ctttgtatta aagaatgagc
     6661 gacaaataag ccgtataaat accctgcaca agcttgcccc aaatcaaaag ctatggtttt
     6721 agagcttaaa tttaaaagct gatgtaaata acaagccgta gaaggcatga aaaaatcaag
     6781 actttgagtt actacgatga gtgcatcaag actattttta tctatattta aaccttgtaa
     6841 aagtgtattg gctgcgtgtt tgccaagatc gcttacacaa gtgtttttat cacaaatata
     6901 acgtgttttt aagcctatga cttttttcat tcttttaagg gttttaatat catttgaaaa
     6961 aacgctttct aactcatcat caatgcaaat tttatgttca ggtacgctta cgcaaatgcc
     7021 tgaaattttg gctttatcaa atctagtttt catggattat aagtccttta aagtttaaat
     7081 tttgaaatga aacaagggct gagttttttt caatttcttt agaaatttgt tctaaaaagc
     7141 tcaaaaatgg catatttctt tcgccttttt gatagtaaag ccttgcatta ttgtttttaa
     7201 gatcaaagaa atgtaaagct agttcaaagg ctttaaaaaa cattctagtt tcaagttttc
     7261 tacctaaagc cctacaagaa atgcaaagat catcgataaa taaatttcct tctttacaag
     7321 aaaaaacaaa aatagcgata atcccactat cgcttaattt atcactcata ctcacactta
     7381 caatgagttc tttttgcatg tgttgtgcga ctttttcttg atttaagcgt gtgtaattag
     7441 cgataaattg attggttttg cctaaaagtt cgctaatgcg agggatattt tgcagatcat
     7501 ttttgctaaa atttaagctg atttcaagat tttgaaaata ttcttcatcg cttaagcttt
     7561 taagctcttc tcttaaagca ttggctgcta tatctttggc acgaatttga tcttctttgg
     7621 tatttgaaag ttttaaaaga ttaggaaaaa gtttgatttt ataaagtata ttttcatcgc
     7681 ataaaagtgt tttaacgcct gtaaatttgg tattttcaag ctcggcgata ttatcatcta
     7741 taaaaagcat ggcattagta tttatattaa attttttagc aatttttaag atattttcac
     7801 cctttggctc ccaattgatc attctaacat caaaatcatc ccattgtaag atgaaatctt
     7861 tccttatttc aaaaagtttt tttgcgtctt tttcttcatt ttttgaagct agggcaagta
     7921 aaaacccttg ttttttaaaa gttttaattt tttcttgtaa ggttttgtgc aaaggactta
     7981 aattaagatt atctataccc tcttcaccta aaattccttg atacaaggta ttatcaagat
     8041 caagtacaag agctttaaga gcgggtttta cgagtgcagg gatgagactg agtcctaaaa
     8101 tttgtgctaa aaaaatcaag gctttattat taagcttaga gcctgtaagt tcttctttag
     8161 ctaggtctaa aatatcttct tcatcaaaat actcttttat gagtttttct atgttaaaaa
     8221 tttcacaatt taaaattttt ttatctgttt taaattctcc taaacta
//
LOCUS       DARBAC010000073         7939 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.073, whole genome shotgun sequence.
ACCESSION   DARBAC010000073 DARBAC010000000
VERSION     DARBAC010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7939
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.073"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            6..578
                     /gene="folE"
                     /locus_tag="SB799_001255"
     CDS             6..578
                     /gene="folE"
                     /locus_tag="SB799_001255"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEG0868491.1"
                     /translation="MQKKFEDCVKTILEIIGENPNREGLIKTPNRVFKAYEFLTSGYT
                     QNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            578..1963
                     /gene="fliI"
                     /locus_tag="SB799_001256"
     CDS             578..1963
                     /gene="fliI"
                     /locus_tag="SB799_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEG0868492.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEVSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(1966..3303)
                     /locus_tag="SB799_001257"
     CDS             complement(1966..3303)
                     /locus_tag="SB799_001257"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEG0868493.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNTEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(3305..4033)
                     /locus_tag="SB799_001258"
     CDS             complement(3305..4033)
                     /locus_tag="SB799_001258"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEG0868494.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYDKGGNLEELFE
                     KSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLKNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            complement(4096..5277)
                     /locus_tag="SB799_001259"
     CDS             complement(4096..5277)
                     /locus_tag="SB799_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEG0868495.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKT
                     QQEMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQE
                     KMKFSIDKEAKDFLLKSADARAMLNLLEFVLVLDEKHISLENLKKLRNTISSEGVSSK
                     DTHYILASAMIKSLRGSDIDAAIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNA
                     LNLAVSTLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEI
                     PNYLNNNHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNHK
                     A"
     gene            complement(5277..6404)
                     /locus_tag="SB799_001260"
     CDS             complement(5277..6404)
                     /locus_tag="SB799_001260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868496.1"
                     /translation="MKKWIFIVFCFILGFIIHIFYIGYTNELLFNKFIKNSNPDYTIT
                     DIYFKKGFLTSKGSFTLNHSHTQLSTKINLKFNNYFFLNKIIKGNFTNPFDFLDEVLK
                     NNKLGTFTLKLHDNNSKIFLNIKDINLSNEGGDTIINGGYIEALMNKNLEIKNIKIHF
                     DMINFSQFYTKFVLQNLNYEQFFNNPVQFYELNLFSDSQQEINFDYLVLDNNKINSFY
                     SKNQVNFNEENSTINLNIQGKSNEIDIDLKSLLGQNLNFDKTKFNITINKFLNSNFNI
                     SHFIQKNLDLKIQNLILEKNKQNISLQGNLNINNSYQAKLQVISSDEPDEIFPWTKDY
                     GGLNQYFLKENNNFFLNLSYDSLANPQLKINGSEFSNMDLN"
     gene            complement(6539..6886)
                     /locus_tag="SB799_001261"
     CDS             complement(6539..6886)
                     /locus_tag="SB799_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868497.1"
                     /translation="MKKSILFASALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNTQAIPV
                     ARKIEIQCYKKAY"
     gene            complement(6950..7555)
                     /locus_tag="SB799_001262"
     CDS             complement(6950..7555)
                     /locus_tag="SB799_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868498.1"
                     /translation="MFYLNKILYFVLILFLLIGIWGFFLNSNPSNQIIKKPHLPSLEI
                     GDLVFRAGIGSESFLIENLSQSPYSHIAMVVKTSPTMLIHVTTDDDKNAKNQVILSSM
                     DDFLKLSHKIAIKRLKFDEKTKQNIVTKALEHLGRKFIISTDKDAFYCTTFLEQSINS
                     ITPFHLQYTLIKAPFNEGLYLFPQTFFENNQSVLIYESQNF"
     gene            complement(7539..7880)
                     /locus_tag="SB799_001263"
     CDS             complement(7539..7880)
                     /locus_tag="SB799_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4878 domain-containing protein"
                     /protein_id="HEG0868499.1"
                     /translation="MACGSSNPEDLAKNFTKDLYSGDAKSVMSYIDLSEAKSDEEKTF
                     VSGKITQVVAENAAKAKRMGGVKDIQIEEKTINEDSAKIRVLVLFNNDNNQSSNVFLA
                     KKDGKWLVLLK"
BASE COUNT         2673 a         1243 c         1193 g         2830 t
ORIGIN      
        1 aaaatttgca aaaaaaattt gaagattgtg ttaaaaccat acttgaaatt ataggagaaa
       61 atccaaatcg tgaaggactg attaaaacac caaatcgtgt ttttaaagct tatgaatttc
      121 ttactagtgg ttatacacaa aatgtcaaag aaattttaaa tgacgcttta tttgaaagct
      181 ctaataatga aatggtttta gtgcgtgata tagaatttta tagtctttgc gaacatcatc
      241 ttttaccttt ttttgggcgt gctcatgtag cctatattcc taataaaaaa gtagtgggtt
      301 taagcaaaat tccacgcctt gtagaggtgt ttgcaagaag acttcaaatt caagaacaac
      361 ttaccgaaca aatcgcacaa gctttaatgg aaaatgtcga tgccaaaggt gttggcgtag
      421 tcatagaagc aagacatatg tgtgttgaaa tgcgtggagt acaaaaagct aattccacca
      481 ctacaacttc agctttgcgt ggaattttct taaaaaatga aaaaactaga gaagaatttt
      541 tttctctcat aaactctgct aaacaggtaa gattttaatg aatcttgaaa aactacgctc
      601 caaacttggc aaagaaaatt taagtgctat ttttggagag attacaaaaa tttctgctac
      661 gagtatagaa attcgtgggc ttaaaacagg ggttggagat atagtgaagc tagtttccaa
      721 tgaaaatgaa aatttaaaca ctctagctat ggtcgtagaa atcaaagaac aatttagcta
      781 tttaagccct ttttctttta tagagggttt taaaataggc gatcgtgctt tcataagtga
      841 tgcaggtatg caaataggcg ttagcgatga acttttaggc agggtagtag atccttttat
      901 gcgtccaaaa gatggtaaag gagctataga agtaagtaaa tatatgccta taatgcgtgc
      961 acctattgat gcgatgaaaa gagggcttat agaagaagtt tttcccgtgg gtgttaaaac
     1021 catagacgca cttttaactt gtggtgtagg gcaaaaactt ggtatttttg caggaagcgg
     1081 agtaggaaaa tccactctta tgggaatgat agttaaaaat tccaaagctc ctataaaggt
     1141 agtggcactc ataggagaaa gggggcgtga aattcctgaa tttatacaaa aaaatttagg
     1201 tggaaagctc gatgatacag tgattattgt tgctacaagt gatgatagtg ctttaatgcg
     1261 taaatacggt gctttttgcg caatgagtgt ggcagaatac tttaaagaac aaggtaaaga
     1321 tgtacttttt atcatggata gtgtaacacg ttttgctatg gcgcaaagag aaataggact
     1381 agctcttgga gaacctccta caaccaaagg ttatccacca agtgttttaa gtcttttgcc
     1441 tcaactcatg gaaagaacgg gtaaagaaga aggtaaaggc actataacgg ccttttttac
     1501 cgttttggtg gatggcgatg atatgagtga tccaatcgcc gatcaaagtc gttctatctt
     1561 agatggacac attgttttaa gtcgtgaatt aacagacttt ggaatttatc ctcctattaa
     1621 tatacaaaac tctgcttcaa gggtaatgag tgacattata agtcctgagc ataaactttg
     1681 ggcaagaaaa tttaagcgtt taaactcgct tttaaaagaa aatgaagtat tgcttcgcat
     1741 cggtgcttat cagaaaggaa gtgataaaga acttgatgaa gctatttcta aaaaagaatt
     1801 tatgcaaaaa ttcttaggcc aaaatcctga agaaagcttt gaatttaatc aaactttaga
     1861 gcttttaagt caaattgata caccaaatac tcctttgcca ccaactcaaa atataaatgt
     1921 aggaagtgca agtgcaacct tgcctaatcc taatttaaaa taaaattatt taataaaata
     1981 atctccatca aaactgatta aagaatattt tctttcatcg cctatgcttt gagttaattc
     2041 ttctatactt aaaaaactta gcgtatcggc ttctacatat tcacgcactt cttcagtatt
     2101 tttatttgca ctgataagtt cttcaaaagt tggagtatct atgccataag tatcaggaaa
     2161 cttgatttca ggacaagcta tggcaagatg gattttgctc gctcctgcag cacgaagtaa
     2221 agaaattatt tttttagaag tagtgccacg caccaagcta tcatcaatga ctactatttc
     2281 tttgccttct aaaactttac gcataggatt aagctttaat tttactttta aatttctaag
     2341 ctcttgagtt ggctctataa aagttcttcc tacataatga tttcttacta ttgccatttc
     2401 aagagggatt tgtaaatatt gagcaaaacc tatagctgca cttactccac tatctggcac
     2461 aggcacgaca aagtctgctt tataagcaaa ttttttagct aaagcttcgc ccattttttt
     2521 acgcacttca tacacgcttt tgccttctac tatgctatca ggtctagcaa aataaatgta
     2581 ttcaaaagcg caaattctag gagtttgaga aaaaagttct atgctttcaa atttatcatt
     2641 tccctgagta aaaataagca tttctcctgg tttaacatca cgaataaatt cagcctctat
     2701 aagatcaaaa gcacaagttt cactagcaac tatatagcct ccatctttta aacgccctaa
     2761 agacaaagga cgcaccccat gaggatctct tacaacataa agtttatctt tgcttgctaa
     2821 aacaaaacaa taagctccta tacattcttt taaactctca ataaatctat cttttagact
     2881 ttcttgctta cttcttgcga taagatggac aacattttct gtgtccatat tggtttgaaa
     2941 aatagcccca tcttgaataa gtcttgatct tacctcttct ttattgacta aatttccatt
     3001 atgcgctaaa gcaatatcac ctaaaactga agtagctgct atgggctgag cgtcatttaa
     3061 acttgaattt cctgctgtag aatagcgatt atgccctata gcgatttcac cctctaaagt
     3121 ttttagatta tcaggattaa aaatttgact cacttcacct ttggctttaa tagtcttaat
     3181 atttttacca ttgcttacac tgataccact tgcttcttgc ccacggtgtt gcatagcaaa
     3241 aagcgcataa tacgcataag tgctagcatt ttttgaattg ataactccta caactgcaca
     3301 cattttaaat tcctaaaaaa tcattaattg aatacatttt tgcttcttgc ttactaagcc
     3361 aaatagcgat tttaatcgca cctttagcaa aagttgccct tgaagtagcg gtatgattaa
     3421 gttctaaaaa ctcaccatct tcataaaaac ctactgtatg gcgtcctact atatcgccac
     3481 cccttaaact catcacagca atctcatctt tgcttctttc acctatgatg ccatctcttc
     3541 cacttactct tactttttca agttctaaat ttctagcttt tgctacactt tgggctaaag
     3601 tcatagccgt accacttggt gcatcttttt tatggcgatg atgcatttct aaaatttcta
     3661 tatcaaaatt ttttaacatt tgacttgctt tgctagcaag atagtttaaa actgcaacac
     3721 ctaaagacat attggtcgca taaaaaatcg gcatcacttc actagcactt tgcatcaaat
     3781 gtaaaatttt ctcatcaagt cctgttgtac ctattaccaa aggtttaggc atagttcttg
     3841 cataatttaa aagctcatga gttccacttg gggaagaaaa atcaataatc acatcacttt
     3901 tttcaaaaag ctcttctaaa tttccaccct tatcataaag tatcgaaatt tgtgcttgtg
     3961 tttcgctttt taaacattct tcaatctgtt ttcccatgcg tcctttagcg ccataaattc
     4021 ctattttaat catctttttc cttgaaaata aaatattgat tttagcattt attttgtaaa
     4081 ttttaaataa taaaattaag ctttatggtt ttttaattta tataaattat ctaacaattt
     4141 tgcttcttct cctaagccct tgctatgata aaattttaaa tttttactaa gatatttttg
     4201 ctctacccag ccaccaaaat catgcggata aagatagttt tgtttttctt gatgattgtt
     4261 gttaagataa ttaggtattt ctaaagcttc attatttttt acatagttta aagcttcatt
     4321 gatagctttg tagcttgcat tagatttgat tgtgcttgct aaataaacta cgcattgggc
     4381 taggataatt cttgcttcag gataacctat atttttaaca gcttctagag tcgaaactgc
     4441 taaatttaga gcatttggat cggcatttcc aacatcttca cttgaaaaaa tcaccaaacg
     4501 tctagcgata aaatccgcac tttctcctgc atcaataagt cttgcaagat aataaatagc
     4561 tgcatcaatg tcacttccgc gtaaactttt tatcattgca cttgctaaaa tataatgtgt
     4621 atcttttgaa ctaacacctt cgctacttat ggtgttgcga agttttttaa gattttcaag
     4681 actgatatgt ttttcatcta aaaccaagac aaattcaagc aaatttagca tagctcttgc
     4741 atcagcactt ttaagtagaa aatctttagc ttctttatca atactaaatt tcattttttc
     4801 ttgtacacgc aagagtaaag tttcaagttc ctttacccct aaagatttaa attcaaaaag
     4861 catggaacga cttcttatgc cagaacttaa aacaaaatag ggattttcag tacttgcacc
     4921 gattaaaatt aaacggtaat tttccatagg aattaaaagc atttcttgtt gggttttgct
     4981 aaggcggtga atttcatcaa taaaaattaa aggcttataa agactatttt tataattgtc
     5041 taaaattttt cttagttctt cgagtttaaa atttcctcca tcaaattcat aaaaatctaa
     5101 gccaaattct tttgctacaa ctctagcaaa agttgttttt ccagaacctg ctgttccaaa
     5161 aaaaatgcta tgaggaagtt tttgtaaagc agtaaatttt ttgaaaattt ctataagctc
     5221 atattgtcct aaaatatcat caaaattttc agggcgaaag gtcaaagcta ggctcattaa
     5281 tttaaatcca tatttgaaaa ttcactacca ttaattttta gctgaggatt ggctaagcta
     5341 tcataagata aatttagaaa aaagttatta ttttctttta aaaaatattg atttaaacct
     5401 ccataatcct ttgtccaagg aaaaatttca tcaggctcat ctgaactgat aacttgtaat
     5461 tttgcttgat aagagttgtt aatatttaaa ttgccttgta gactgatgtt ttgtttattt
     5521 ttttcaagaa ttaaattttg tatttttaga tcaagatttt tttgaataaa atgagagata
     5581 ttgaaatttg agttaagaaa tttatttatg gttatattaa attttgtttt gtcaaaattt
     5641 aaattctgac ccaataaaga tttaagatca atatcaattt cattggattt tccttgtatg
     5701 tttaagttta ttgttgaatt ttcttcatta aaatttactt ggtttttgct ataaaaagaa
     5761 ttgattttat tgttatctag tacaagataa tcaaagttga tctcttgttg gctatcgcta
     5821 aataaattta actcataaaa ttgtacagga ttgttaaaaa attgttcgta atttaaattt
     5881 tgcaatacaa atttagtata aaattgagaa aaattaatca tatcaaaatg tattttaatg
     5941 tttttaattt ctaaattttt attcattaaa gcttcaatat atccgccgtt tatgatggta
     6001 tctccgcctt cattgcttaa atttatatct ttaatattta gaaatatttt agagttgtta
     6061 tcgtgtaatt tgagagtaaa agttcctaat ttattgtttt ttaacacttc atctaaaaaa
     6121 tcaaaaggat ttgtaaaatt tccttttata attttattta agaaaaaata attattaaat
     6181 ttaaggttga ttttggttga aagctgtgta tgagagtgat ttaaagtaaa acttccttta
     6241 gaagttaaaa aacctttttt gaagtaaata tctgtaattg tataatcagg attgctgttt
     6301 ttaataaatt tattaaataa aagttcgtta gtgtatccta tataaaatat atgaataata
     6361 aaacctaata taaaacaaaa aacaataaaa atccattttt tcattatttg ccttagatga
     6421 aaatataagt gttattttat aaattgcttg ttaaaaaaga gtttaaattt ttatttaaga
     6481 gtgatgaagt agtttagtaa agaatgattt ttataaatcc cttgttaagg gatttatatt
     6541 aataagcttt tttataacat tgaatttcaa tttttctagc tactggaata gcctgagtat
     6601 ttggtgtagc aggtgttcca taagaaattt tactttctaa aaaatttcca acctgtaaat
     6661 ctttaaaagt tccatcttta tctgttccaa aaataccaca atcatccatt tctatttcgg
     6721 tatttggtag aacttttata gccatttgtc cgccataaat agagtcaata agcaaggttt
     6781 tattgttatc ataaatttgt gcaatagtac cttcaagttt tagactatct gcaaaaagca
     6841 ttgagctagc taaaagtgct gatgcgaata aaatactttt tttcataatt atttctcctt
     6901 aatgtaaagt gatgacatta taaaattttt aagtgaagtg aatgtgaaat taaaaatttt
     6961 gactttcata aattaatacg ctttgattat tttcaaaaaa agtttgtgga aaaagatata
     7021 aaccttcatt aaaaggagct ttgattagag tgtattgaag atgaaatggg gtaatggagt
     7081 taatagattg ttctaaaaaa gtagtgcagt aaaaagcatc tttatctgta cttatgataa
     7141 attttctgcc taaatgttcc aaagctttag taactatatt ttgtttggtt ttttcatcaa
     7201 attttaatct tttaatagca attttatgac tcagttttaa aaaatcatcc atagagctta
     7261 agataacttg gtttttagcg tttttgtcat catctgttgt aacatgtatg agcatagttg
     7321 gagaagtttt aactaccata gcgatatgag aataagggct ttgacttaaa ttttctatta
     7381 aaaaactttc acttcctatt cctgcacgaa agacaagatc gcctatttca agagaaggta
     7441 gatggggttt tttgatgatt tgatttgaag gattggaatt tagaaagaaa ccccaaattc
     7501 caatcaataa aaataaaatt aagacaaaat ataaaatttt atttaagtaa aacaagccat
     7561 tttccatctt ttttagcaag aaaaacattg ctgctttgat tattatcatt gttaaataac
     7621 actaaaactc tgattttagc agaatcttca ttgattgttt tttcttcaat ttgaatatct
     7681 ttaacaccac ccattctttt tgctttggct gcattttcag caacaacttg agtgatttta
     7741 ccactaacaa atgttttttc ttcatcactt ttagcttcgc taagatcaat gtaactcata
     7801 acagatttag catcaccact gtaaagatct tttgtaaaat ttttagctaa atcttcagga
     7861 tttgaagaac cgcaagccac tacaaaaaag gcaactaaaa ccaagaaaga aagtttgaaa
     7921 aatttcattt ttttccttt
//
LOCUS       DARBAC010000074         7890 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.074, whole genome shotgun sequence.
ACCESSION   DARBAC010000074 DARBAC010000000
VERSION     DARBAC010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7890
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.074"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1207
                     /locus_tag="SB799_001264"
     CDS             <1..1207
                     /locus_tag="SB799_001264"
                     /inference="COORDINATES: protein motif:HMM:NF018485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868500.1"
                     /translation="LFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQ
                     ATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSYSGILVIR
                     FLTGLGSACALVCLVPIAQQWFEKKALHFVISFNITSNLVGITLGLILAESISNYFGN
                     WRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGMIIFYIGP
                     ILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFFKRKNISF
                     KIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELKNSNPN
                     QTAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISAILAQFVLPR
                     RENFIQGEK"
     gene            1209..2360
                     /locus_tag="SB799_001265"
     CDS             1209..2360
                     /locus_tag="SB799_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEG0868501.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVVQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGTLNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLVVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GVAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2364..3104)
                     /locus_tag="SB799_001266"
     CDS             complement(2364..3104)
                     /locus_tag="SB799_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HEG0868502.1"
                     /translation="MKILFSPSESKNENCVKNPINENSFIFKELFPYRMEALKHYEEF
                     IKNASLQNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENE
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3195..4313)
                     /locus_tag="SB799_001267"
     CDS             complement(3195..4313)
                     /locus_tag="SB799_001267"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868503.1"
                     /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIAS
                     LSQDSGIKIEFSDFKCNADGDFIACLSSNFKTLAKDNKDEYQELFQAKNIKIRSNEIY
                     KGEANASISIKEYYNDLFKNQKSIQSNLVFENFKLGEKVVSDINASLFQQDPKISSFI
                     NKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKG
                     IKFNTQTLAMDEQAINELLNMANYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSY
                     IATAKENLQTLKAQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYST
                     QGIDSIEKLSINNQDATEALKIILPFIMFSMLMGGASF"
     gene            4532..5371
                     /locus_tag="SB799_001268"
     CDS             4532..5371
                     /locus_tag="SB799_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0868504.1"
                     /translation="MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIG
                     VFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPDIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMAIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            5412..6659
                     /locus_tag="SB799_001269"
     CDS             5412..6659
                     /locus_tag="SB799_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868505.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFVKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYRICSIFSIAFIIFGMLFSFYDEKFLFYFLLACFTQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFVVNAFYKEYLGIYLAIVGSCS
                     LFCVFLLKRVFARSKIKELSIVF"
     gene            complement(6642..>7890)
                     /locus_tag="SB799_001270"
     CDS             complement(6642..>7890)
                     /locus_tag="SB799_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEG0868506.1"
                     /translation="FKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKAGNIRAIK
                     GKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMSAMAEFKN
                     LECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEASLPFNTL
                     RKKGKIYELYAQNFKGGHSGINIVRNEKSSIKEMAKFIQENKGEIISFEGGERINSIP
                     KHAKALVHFKNEVKSNNWIKCDFKEEGEFEICDQSNKLLSLINSFTHGVRAYDENLGI
                     VQTSINLATLRMQDKQIKFALFARSNILDGLKQVEFETLEFFKAFDFKVRSFNFYPPW
                     EGKPNALSDMVFKALKKISPNAKVSAIHAGLECGIIEKKQELLCASIGPNIHNPHSTD
                     EHCEIASVEKISKVVFEVLKDNA"
BASE COUNT         2422 a         1039 c         1350 g         3079 t
ORIGIN      
        1 tttatttcat tttagacgca ttggagttga atttataatt tttagtgttt atgctgtttt
       61 tagtatctct tgggcagcaa cagggtcttt aatgcctttg atttcaaatg atcttgccct
      121 aaatactcag caagctactt taatcactag catgatagta gttgcgaaaa tttttggtgc
      181 ttcatttact gcttttttgg tttataaatt cggattaaaa aagggatatt ttttaggctg
      241 tattttaatg agttcgggta tctttttaag ttttgtagat agttatagtg gtattttggt
      301 tataagattt ttaacagggc ttggttcagc ttgtgcttta gtttgcttag tgcctattgc
      361 acagcaatgg tttgaaaaaa aagctttgca ttttgtaatt agttttaata taacttcaaa
      421 tttagtaggc attactctag gacttatttt agctgaaagt atctcaaatt attttggaaa
      481 ttggagagat tctttatcat tttatgcttg gattaatttg attttattga ttttgtggct
      541 ttttgtaggt aaagatgaga ataaaaaaga agaaaaaaag aataatgcaa aagatcttat
      601 ttatgctcta aaatctcgtg ttacttgggg tatgattatt ttttacatag ggcctatttt
      661 atttttaaat tctcttttta cttttttacc aactttttat gcacaatatg caggttttag
      721 taaagaatta gctgattttg ctaaaaaaga aattccagcc ttggctaatt ttgctattat
      781 ttttggtcct tatcttggat tattttttaa aagaaaaaat atttctttta aaataatgct
      841 attgtctgga ggagcgtgta tttttatatg cggattttgt atgttgtttt tacaaaattt
      901 agtattgata cagatttttg ctgtgttatc aggcattttt tattctatgt ggtttccatt
      961 tttctttaat ctaccttcag aattaaaaaa ttccaaccca aatcaaactg cttatattat
     1021 gagtgctttt tggagtatta cctttgttat actatcattt aacctatggg tagtatcttg
     1081 gagtgttgat aaaacccata gttttacttt gggttttgtt tatatttttg ctttgatttt
     1141 tatttcagcg atcttagcac aatttgtttt acctagaaga gaaaatttta tacaaggaga
     1201 aaaatagaat gaatttaatt ccagaaatac tagacttaca aggcgaattt gaaaaaattc
     1261 gtcatcaaat tcatgaaaat cctgagcttg gttttgatga attatgtact gcaaaattag
     1321 tggtgcaaaa attaaaagaa tttggttatg aggtttatga agaaatagga aaaacaggtg
     1381 ttgtgggggt tttaaaaaag ggaaatagcg ataaaaaaat aggacttcgt gcagatatgg
     1441 atgctttgcc tttacaagaa tgcacaaatt tgccttataa aagcaaaaaa gaaaatgtaa
     1501 tgcatgcttg cggtcatgat ggacatacta cttctttatt gcttgctgca aagtatttag
     1561 caagtcagaa ttttaatggc actctaaatc tttattttca acctgctgaa gagggtttgg
     1621 gtggtgctaa ggcaatgata gaagatggat tgtttgaaaa atttgatagt gattatgttt
     1681 ttggatggca caatatgcct tttggtagcg ataagaaatt ttatcttaaa aaaggtgcga
     1741 tgatggcttc ttcggatagt tatagcattg aagttattgg aaggggtggt catggaagtg
     1801 ctccagaaaa ggcaaaagat cctatttatg ctgcttcttt gcttgttgtg gctttacaaa
     1861 gcatagtatc tcgcaatgtt gatccccaaa attcagcagt tgtaagcata ggagctttta
     1921 atgcaggaca tgcttttaat atcattccag atattgcaac gattaaaatg agtgttagag
     1981 cattagataa tgaaactaga aagctaactg aagaaaaaat ttataaaatt tgtaaaggtg
     2041 ttgcacaggc taatgatata gagattaaaa tcaataaaaa tgttgttgca ccagtgacta
     2101 tgaataacga tgaagctgtg gattttgcta gtgaggttgc aaaagaatta tttggcgaaa
     2161 aaaattgtga atttaatcat cgtcctttaa tggcaagtga ggattttgga tttttttgcg
     2221 aaatgaaaaa atgtgcctat gcttttttag aaaatgaaaa cgacatttat ttacataatt
     2281 ctagttatgt ttttaatgat aagcttttag ctagggctgc aagttattat gcgaagctag
     2341 ctttaaaata cttaaaataa aaactaatct agaatttcaa gcacaatttc ttcctttaaa
     2401 cctttgattt gaatttcttt gagttttagg tttgaaggaa ggtttgctaa aagctcttta
     2461 ttgtttttta cttggttttt tgcacttatg gagagtaaaa ttcctctata agctttagca
     2521 aaatgactga tgactttacc attttttaca aatttataag tataaaattt cttttttgga
     2581 gtataaaatt tatcataaaa tcctgctcta aggtcaagta tttcctcatt ttctaagtat
     2641 tcatctaagg ctttactaaa atgttcttta taaaatttct ctatggcaaa atttcctatt
     2701 ttagcccctt gcttgaattt ataaaagggt agggtatcat tagctcttac aacgccaaaa
     2761 agattagaaa atataagagt attttctaaa atataagctt ggcttttttt atctaaggct
     2821 ttaaaattaa gatattcata acttacccca gtataaagca atatagcttc ttgggtggga
     2881 gcttgtttta agtcgtgttt aaatttatca atttcatttt cgtttttaat gccaaaaagt
     2941 tcttgtaaat tctgtaaact tgcatttttg ataaattctt cataatgctt taaagcttcc
     3001 attctataag gaaataattc tttaaatata aatgagtttt cattgatagg attttttacg
     3061 caattttcat ttttgctttc actaggggag aataaaattt tcattttagc cttttttgtt
     3121 aatgttatga aacattaaga gcaaagaatt taatcttgct tttaatgttt ttgaagtttt
     3181 tatcatttta aaatttaaaa tgacgctccg cccattaaca tggaaaacat gataaatggg
     3241 agtataattt ttaacgcttc tgtggcgtct tgattgttga tgcttagttt ttctatgctg
     3301 tcgattcctt gtgtgctata gtcactaaca gggatgtttt taaattttaa atcaaggttg
     3361 agtttataat catcattttg agtgatattg tttaaaatag ctaaagcttt atcaaagatt
     3421 aatgcttgtt cttcattttg actttgagct tttaaggttt gtagattttc cttagcagtt
     3481 gctatatagc tactaaatac gccttcagtt ttaagagttg aatcaatttt aaaattattt
     3541 aagatgatgt atttttggat tgtattgcta aaatctgaag cttgttcgta gtttgccata
     3601 ttaagaagtt cattgatagc ttgttcatcc atagctaaag tttgagtgtt aaattttata
     3661 cccttagaat caaggtaatt aagtaaatct tcttttagat ttatatttag atttgtattg
     3721 aaatttaatt ttgcgttata aaattttata tcaagattat ctagataatt gttttcttgt
     3781 ttgttgatag agttatcaaa tgataaagta taagaatccg agcttaattt attgataaaa
     3841 gagctgattt ttggatcttg ttgaaataag cttgcattga tgtcgctaac aactttttct
     3901 ccaagtttaa aattttcaaa aaccaaattt gattgtatgc ttttttggtt tttaaaaaga
     3961 tcgttgtaat attctttaat gctaattgat gcatttgctt cgcctttgta aatttcattt
     4021 gagcgaattt tgatattttt tgcttgaaat agctcttgat actcatcttt attatctttt
     4081 gcaagagttt tgaaatttga acttaaacac gctataaaat caccatctgc attgcattta
     4141 aaatctgaga attcaatctt tattccagag tcctgagaaa ggcttgcaat ttcttgttta
     4201 actgtttgat ttagttgatt ttcatatttt ttaactgttt tttcatctat ggaatttccg
     4261 caagctgaaa acaaaacagc tattccaata gagagaaaaa tacctttttt catagttttc
     4321 tccttaaaaa ttttaaaaaa aagattatat ctttttttac ttaaaattta aacaatgcta
     4381 aaagagggtg tgagattaat tacattttta cacataggaa aatcttttta gtttgtttca
     4441 aatgcattat ttataatttt aagtataatt aactttgcaa ttattatata ttttgcaata
     4501 gctttaagct tattttaaag aaaggaaatg tatgaaaaaa atacttctaa gtgttttaac
     4561 ggcctttgtt gtagtagtat tggctgcttg tggaggaaat tctgactcta aaactttaaa
     4621 ttctcttgat aagatcaagc aaaatggagt tattaggatt ggggtatttg gcgataaacc
     4681 accttttggt tatgtggatg aaaaaggaaa caatcaaggc tatgatatag ctttagctaa
     4741 acgcatagca aaagaacttt ttggcgatga aaataaggtg caatttgttc ttgttgaagc
     4801 tgcaaatagg gttgagtttt taaaatcaaa taaagtagat attattttgg ctaattttac
     4861 tcaaactccg caaagagccg agcaggttga tttttgcttg ccttatatga aggtagcttt
     4921 aggcgtagct gtaccaaagg atagtaatat aactagcgta gaagatttaa aagataaaac
     4981 cttgctttta aacaaaggca caacagcaga tgcgtatttt acgcaaaatt atcctgatat
     5041 taaaacttta aaatacgatc aaaataccga aacttttgcc gctttaatgg ataaaagagg
     5101 cgatgcttta agtcatgata ataccttgct ttttgcttgg gtgaaagatc atcctgattt
     5161 taaaatggct atcaaagagt taggcaacaa agatgttatc gcaccagcag ttaaaaaagg
     5221 cgataaagaa cttaaagaat ttatcgataa tttgatcatt aaactaggcc aagagcagtt
     5281 ttttcacaag gcttatgatg aaactttaaa agctcatttt ggagatgatg ttaaggctga
     5341 tgatgtagtg attgaaggtg gaaaaattta acaaagggct ttttgccctt tatattgatt
     5401 taggataaaa tatgcaaaaa aaatacaaaa atattattta tgcttctttg ggtggaattt
     5461 tggaatttta tgattttgtg ctttttgcct tttttttgga tatttttgct aaggtattct
     5521 ttccgcaaaa tgatgctttt tggatgcaga taaatgctta tatagccttt ggtgctgctt
     5581 atttagcgcg tccttttggt tctattgtga tggcacattt tgctgataga tatggaagaa
     5641 agaatatttt ttatatttct atgcttttga tggttttgcc tagttttgct ttagcttttt
     5701 tgccaagtta tgaaagtata ggtatatttg ctactttgat tttatttact attcgtattt
     5761 tgcaaggttt agccgttgga actgaggtga gcggagcttg gatttatgtg agcgaatttg
     5821 tcaaagggcg tcaaattcct ttagctcttg gttttatttc agcgacttta accataggtt
     5881 tattgctagg aaatattgcc actttaggca taagatctta ttttacccca gaagaagttc
     5941 aaagctatgc ttggagaatt ccttttatca taggaggatt ttttggaatt ttagctttgt
     6001 ttttaagaaa taaactcagc gaaactccag aatttgtaaa agttcaaaat gaaaagaaaa
     6061 ttttaagttt tccattgttt gaagctttaa aaactcataa aatgagcatg cttgtttgtt
     6121 ttttaatgac catggtttta acaagcggtg tggcaacttt gatgattttg cctaagtatt
     6181 ttgaaagtct tttagctatg agtaaaactt ctgctttatg ggtacaaaat tttgctattt
     6241 tagcggtgat ttttggagct ttatttcaag gttttttagc aagcaaatgg ggaagctata
     6301 ggatttgttc tatttttagt atagctttta ttatctttgg tatgcttttt agtttttatg
     6361 atgagaaatt tttattttat tttttactgg cttgttttac acaaggtatt atcactttcg
     6421 cacctgtttt tatgacacaa atttttaaaa gcgaacttaa atttagtggg cttagttttg
     6481 cttataatat ttcttatgcg attttaggtt ttttaacccc ttttgtagtt aatgcttttt
     6541 ataaagagta tttaggtatt tatcttgcta tagtgggatc ttgctcctta ttttgcgtgt
     6601 ttttgttaaa acgcgttttt gcaagaagca agattaaaga attaagcatt gtcttttaaa
     6661 acttcaaaaa caaccttaga tattttttca actgaagcga tttcgcaatg ctcatcagtt
     6721 gaatgaggat tatggatatt tggacctata gaagcgcata aaagctcttg ttttttctct
     6781 ataatgccac actcaagccc tgcatggata gctgaaactt tggcattagg cgatattttt
     6841 ttaagcgctt taaaaaccat gtcgctaagt gcgtttggtt tgccttccca aggtggatag
     6901 aaattaaaac ttcttacttt aaaatcaaaa gccttgaaaa attctaaagt ttcaaattct
     6961 acttgcttaa gtccatcaag tatattagat cttgcaaaaa gtgcgaattt gatttgttta
     7021 tcttgcattc ttaaagtagc taggttaatg cttgtttgaa ctatacctag attttcatca
     7081 taagctctaa ctccatgagt aaaagaattt ataaggctta aaagtttgtt actttgatcg
     7141 caaatttcaa attcaccttc ttctttaaaa tcgcatttta tccagttatt gctctttact
     7201 tcatttttaa aatgcactaa agctttggcg tgtttaggta tagaattgat tctttctcca
     7261 ccttcaaaag aaatgatttc tcctttattt tcttgtatga atttagccat ttctttgatg
     7321 gagctttttt cgttgcgtac gatatttatg cctgagtgtc cacctttaaa attttgcgcg
     7381 taaagctcat aaattttacc cttttttcta agggtattaa aaggcaagct agcttctata
     7441 tctactccac ctgcacagcc tatcatgatc tcatcatcgc tttcatgatc taaatttaaa
     7501 agcattttag attctaaagt gtgctcgagt gaattcactc ccatgagtcc tacttcttca
     7561 tcgtttgtaa aaagacactc taaattttta aattcagcca tagcactcat catgatggct
     7621 atacctatac cattatccgc gccaagactt gaatttttgg ctcttaaaaa gccattttct
     7681 tcataaactt ctaagtttgg tgcatcgccc atacagacca tatcataatg gctttgtaag
     7741 caaatttttg gtttgccttt tatggcacgg atatttcctg ctttatctac actcacttta
     7801 aagcctttat ctttagcata agagcttaaa aattctttca tttgttctgt ttcataactg
     7861 caatgaggaa ttttacataa ttgtttaaaa
//
LOCUS       DARBAC010000075         7831 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.075, whole genome shotgun sequence.
ACCESSION   DARBAC010000075 DARBAC010000000
VERSION     DARBAC010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7831
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.075"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            36..1031
                     /locus_tag="SB799_001271"
     CDS             36..1031
                     /locus_tag="SB799_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEG0868507.1"
                     /translation="MKKILSLSVASLALCGALNAVDLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGMMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     DFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            1041..1955
                     /gene="pstC"
                     /locus_tag="SB799_001272"
     CDS             1041..1955
                     /gene="pstC"
                     /locus_tag="SB799_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEG0868508.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            1952..3040
                     /gene="pstA"
                     /locus_tag="SB799_001273"
     CDS             1952..3040
                     /gene="pstA"
                     /locus_tag="SB799_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEG0868509.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPAYDLLSRAEQRKIRTGQITEKTWLLANSEVDQYMKQKYNRLSE
                     KQRTLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVIGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAQAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            3037..3777
                     /locus_tag="SB799_001274"
     CDS             3037..3777
                     /locus_tag="SB799_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEG0868510.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            3849..6293
                     /locus_tag="SB799_001275"
     CDS             3849..6293
                     /locus_tag="SB799_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868511.1"
                     /translation="MFETLLKLSEEPLKSKIKDLYFSKFNYVGAKIDFCITQNLGLLG
                     EINLLWAEAKQGKSELKKSFVQLVLTIGKYKFYTEQTPNLLCAFDAEKIAFLPFSSLQ
                     EIFYQSDINFSVTPSNHKSEQFLKLLKKLDSILNTAQIFYYEKNDEELKTFIKENLTS
                     ENISKIKIDKNNFVSIYHKWNKMVKDTISIDWNLAKESGIIDADFYLADLLSNENETI
                     SQNLFAILKKDYYEFNKTKSDLGSIINERTSFKDNQKAHHGFWAIYERPPRKEFWDYI
                     IKRRDLLVDQDIRERKGAFFTPRIWVDKACEYLSKTFGEDYEEEYYIWDLAGGTGNLL
                     ANFTNAKNIFCSTLDKADIDVIHERIKNGANLFENHVFEFDFLNDDFFDEVDDRGKII
                     QKSKLPSNLQEILKDENKRKKLIIFINPPYAEATSATQVTGTGKNKEKVARENKICEK
                     YKDILGKANNELFAQFFIRIYCEIEDCLMASFSTLKYVNSTNFIKFRENFKAKFLKGF
                     MVPANTFDNVKGNFPIGFLIWDTSKKEEIKKIKLDIFNKNGSFLGIKTFYNNQKESIN
                     KWIKIFDDKKSQEKFGFMGNPSPDFQHNSQLYLSLNKGIEHFNFYIFSLKNLLNGAVY
                     FSVRHAINATWINDRDQFLYPNKLYDKDDEFKSDCLAFMLFHGQNRISAKEGINHFIP
                     FSEKELGITKEAFESDFMYKFINGKIKDENSLFGDELAKIEFSLEAQELLKAGKELFK
                     YYHTHSEDKNYLANASLYDIKEFFQGRDEKDRMNRPSQAKDEHYKALLSDLNIALNAL
                     AKKLEPKIYEYGFLKE"
     gene            6296..7612
                     /locus_tag="SB799_001276"
     CDS             6296..7612
                     /locus_tag="SB799_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEG0868512.1"
                     /translation="MAKKQLSLTRLSIPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGAL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMLI
                     GFLMDIVVICGNYYVLHYTKSELFGVGLSNIFARIVAIVALLVILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGETSLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLVGARYINIAYKHAWRALYFSVIASALVALLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFYFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            7588..>7831
                     /locus_tag="SB799_001277"
     CDS             7588..>7831
                     /locus_tag="SB799_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEG0868513.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPY
                     FCTFKSVYEFLDKSNPWINEAKKRFEKKALKDDELIF"
BASE COUNT         2683 a          986 c         1466 g         2696 t
ORIGIN      
        1 aacttccatt acttttttaa agttaaggag aaaaaatgaa aaaaattcta tctttaagtg
       61 tggcaagtct tgcactttgt ggtgctttaa atgcagtaga tttaaaaatc gcaggttcat
      121 cgactgtgta tccttttact tcttttgtag ctgaagaata tgcttcgatc aaaaatacaa
      181 aaactcctat agtagagagc ttgggaacag ggggtggatt taaggtattt tgtgaaggaa
      241 ctactgatat ttctaatgct tcaagaccta tgaaattaag cgaatttgaa acttgcaaaa
      301 aagcaggggt aactgatata gtagggatga tgataggtta tgatggtata gttttagctc
      361 aaaataaaac caatgctcca ttaaatatca caaaaaaaga acttttctta gcattggcaa
      421 aagaaattcc acaaaatgga aaacttatac caaatcctta tacaaactgg aatcaaatca
      481 ataaaaattt accaaatcgt aaaattagtg tttatggtcc accatcaagt tcaggaacaa
      541 gagatactat agaagagctt gtaatgagtg atgtgtctaa aaaaattcct gagtataaag
      601 gcgagtataa aaccatacgc caagatggtg cttatatccc aagtggtgaa aatgataatc
      661 taatcgtttc aaaacttact attgataagg atgcttttgg aatttttggt tatagctttt
      721 tagtgagcaa ttcagacaaa atcaatgctg ctaatataga tggtgttacg ccaagcgaag
      781 aaagcatcgc agatgaaaaa tacgaacttg caagaagttt gtttatttat atcaatgcta
      841 agaaaaatcc aaaagaagcc tttgattttg caaaaattta tatgagtgat gatttggcaa
      901 aaagtggtgg agagcttgaa aaaataggac ttgttccttt gagtgatgat aaattaaaag
      961 cttctcaaaa acacgtagaa gatagaaaaa ttttaaatga tgagcttgta aaagctggaa
     1021 aagtttttta aggaaaaact ttgttaaaag aaaaaataat caaatttgca ctttttttat
     1081 gtgcttttgt aagcgtgata gtaagttttg ctatcatgct tacaatttta attgaagctt
     1141 taaaattctt tcaaaaagaa agcgttgtta cctttttatt ctcaagtcag tgggcagctg
     1201 atgcagcttt tatgaatgca gatggcacga gtaaacaagg tgtttttggg gcgctatcgc
     1261 ttttttgggg aactttttat atttcattga ttgctatgct aacggcttta cctttagggg
     1321 ttatgtgtgc tatatattta ggtgtttttg ctggcaaaaa atctaaaaat tacttaaaac
     1381 ctattttaga aatcattgca gggattccta ctgttgtttt tggatttttt gcggctatag
     1441 ttgtagcgcc ttttatagtg tggttttttt ctttatttgg catacaagca agctttcaaa
     1501 gtgctttagg cgcaggtttt atcatgggga tcatgatagt acctatagtg gcttctttat
     1561 ctcaagattg cattgaagca gtaagcgaga aaaggattaa tggcgcttat gctttaggta
     1621 tgacaaaaaa agaagtggtt tttgccgtga ttttacctga ggctattcct ggtatagttg
     1681 cagcttgtct tttaggactt tcaagagcct taggcgaaac tatgatagtg gtgatggcag
     1741 cttctttgcg tccaaattta actttaaatt ttttagaaga tatgacaacg gtaacggtaa
     1801 aaatcgtaga agctttaagt ggagatcaag cttttgatag ttctttggct ttaagtgctt
     1861 tttctttagg tttggtgctt tttgtcatca ctttaatcat caatatgttt agcgtttatc
     1921 ttatcaatcg ctttcacaaa aggaaaaatt tatgaaaaaa ctttttaaaa aaagacaaaa
     1981 agcttcaaag tcttttaaaa gactttgtaa aatggggctt tatattaatt taatttttct
     2041 ttgtatcttt ttaggaagtg tagcttatct tggatttcct gcttttaagc aaacttatat
     2101 ttttgtagag gctaatagaa attctcctgc ttatgatctt ttatctcgcg cagaacaaag
     2161 aaaaataaga acagggcaaa tcactgaaaa aacttggctt ttggcaaatt cagaagtaga
     2221 tcaatatatg aagcaaaaat ataatcgcct tagtgaaaaa caaagaactt tagtcgatga
     2281 tcttgtgcaa aaaggcgaga tagagcttaa atttaatagc aatttctttt taaatgggga
     2341 ctcaaaatct cctgaaaatt caggaatttt atcttcagtt atagggactt tgcttgttat
     2401 gcttgtttgt atggttgtga gtgttcctat aggcgttgca gcggcaattt acttagaaga
     2461 atttgcacca caaaatatcc ttacacattt tatagaagtg tgtattaaca accttgcaag
     2521 tattcctagt atcttgtttg gacttttagg acttggagtg tttatcaatc tttttggaat
     2581 gcctcgttca agtgctttag tgggtgggct tactttggcg atcatgagtt tgcctattat
     2641 cattgtttca accaaagcgg ccttaaaaag tgtggatatc aatatgaaaa atgctgctta
     2701 tgccttaggt atgacaaagg ttcaaatggt aaaaggtatt atgttacctt tggctatgcc
     2761 tatgatttta acaggttcta ttttaacttt agctcaagct ataggcgaga ctgcaccttt
     2821 gatgattatc ggtatgatag catttatccc tgatgtagct agttcgattt ttgatccaac
     2881 tagcgtttta cctgctcaaa tttactcatg gtcggctatg ccagagcgtg catttttaga
     2941 aagaacagca gcgggtatta ttgtgctttt aggactttta gtcgtgttaa atcttagtgc
     3001 aatattatta agaaaatatt ttcaaggaaa attaaagtga tagcaaaaac aacaaattta
     3061 aatttatttt atggaaaaaa acaagcttta tttgatatca atatgcaaat agagcaaaac
     3121 aaaattactg cactcatcgg tgcttcagga tgtggtaaat ccactttttt gcgttgtttt
     3181 aatagaatga atgataaaat tgcaaaaatc gatggtttag tggaaattga aggaaaagat
     3241 gttaaaaatc aagatgtagt agccttgcgt aaaaatgtag gcatggtttt tcaacaacct
     3301 aatgtttttg taaaaagcat ttatgaaaac atctcttatg caccaaaact tcatggtatg
     3361 attaaaaaca aagatgaaga agaagctttg gtggtggatt gcttgcaaaa agtggggctt
     3421 tttgaagagg ttaaagataa attaaagcaa aatgccctag ctctttcagg cggacaacaa
     3481 caacgccttt gtatcgcaag agctttagcg atcaaaccta aacttttgct tttagatgag
     3541 ccaacttctg cacttgatcc tataagttca ggcgtgattg aagagctttt aaaagaatta
     3601 agtcataatc tttctatgat catggttacg cataatatgc aacaaggcaa acgcgtagct
     3661 gattatacag cattttttca tcttggagag cttatagaat ttggtgaaag taaagaattt
     3721 tttgaaaatc caaaacaaga aaaaaccaag gcttatttaa gcggtgcttt tgggtgagat
     3781 ttatacaaaa acaagtatct ttgtattaaa attatatcct taaaaaagaa ttttataagg
     3841 atatagtttt gtttgaaaca cttttaaaac taagcgaaga acctttaaaa agcaagatta
     3901 aggatttgta tttttctaaa tttaattatg taggtgctaa gattgatttt tgtatcactc
     3961 aaaatttagg acttttaggt gaaattaatt tgctttgggc tgaagctaaa caaggaaaaa
     4021 gtgagcttaa aaaatctttt gtacagcttg tgcttaccat aggaaaatat aaattttata
     4081 cagagcaaac tccaaatttg ctttgtgctt ttgacgctga aaagatagcc tttttacctt
     4141 tttcttcctt gcaagaaatt ttttatcaaa gcgatataaa ctttagtgta acacctagta
     4201 atcataaaag cgagcagttt ttaaaacttc taaaaaaact agatagcatt ttaaatacag
     4261 cgcaaatttt ttattatgaa aaaaatgatg aagaattaaa aaccttcata aaagaaaatc
     4321 ttacaagcga aaatataagc aaaattaaaa tcgataaaaa caattttgta agcatttatc
     4381 ataaatggaa taaaatggtt aaagatacta tcagtattga ttggaatttg gctaaagaaa
     4441 gcgggattat agatgctgat ttttatttgg ctgatttact ctcaaacgaa aatgaaacca
     4501 tcagtcaaaa tttatttgcc attcttaaaa aagattatta tgagtttaat aaaacaaaaa
     4561 gtgatttagg ttctatcatc aacgaacgca cttcttttaa agataatcaa aaagcccatc
     4621 atggattttg ggcgatttac gagcgtcctc caagaaaaga attttgggat tatattataa
     4681 agcgtagaga tttgcttgta gatcaagata taagagagcg aaaaggagcc ttttttactc
     4741 caagaatttg ggtggataag gcttgtgagt atctttctaa aacttttggg gaggattatg
     4801 aagaggagta ttatatatgg gatttagcgg gtggaacagg aaatttactg gccaatttta
     4861 ccaatgcaaa aaatatcttt tgttctactc ttgataaagc cgatatagat gtgatacatg
     4921 agcgtataaa aaatggtgcg aatttgtttg aaaatcatgt ttttgagttt gattttttaa
     4981 atgatgattt ttttgatgag gtagatgata gaggcaaaat catccaaaaa tcaaaattac
     5041 cttcaaattt acaagagatt ttaaaagatg aaaacaaacg caaaaaatta ataatcttta
     5101 tcaatccacc ttatgcggaa gctacaagtg ctacgcaggt tacaggaact ggaaaaaata
     5161 aagaaaaagt agctagggaa aataaaattt gtgaaaaata taaagacatt ttaggaaaag
     5221 caaataatga actttttgca caatttttta tcagaattta ttgtgagata gaagattgtt
     5281 taatggctag tttttcgact ttaaaatatg tcaattctac aaattttata aaatttagag
     5341 agaattttaa ggctaaattt ttaaaaggct ttatggtgcc tgctaatacc tttgataatg
     5401 taaaaggaaa ttttcctata ggatttttga tatgggatac aagtaaaaaa gaagaaatta
     5461 aaaaaataaa acttgatata tttaataaaa atgggagttt tttaggaata aaaacttttt
     5521 ataataatca aaaagaaagt attaataaat ggatcaagat ttttgacgat aaaaaatcac
     5581 aagagaaatt tggatttatg ggaaacccaa gcccagattt tcaacataat agccaattat
     5641 atctttctct taacaaagga atagagcatt ttaattttta catattctcg ctaaaaaacc
     5701 ttttaaatgg tgctgtatat ttctctgttc gtcatgctat aaatgctact tggattaatg
     5761 atagggatca gtttttgtat ccaaataaac tatacgataa agacgatgag tttaaaagtg
     5821 attgtttagc ttttatgctt tttcatgggc aaaatcgtat aagtgcaaaa gaagggataa
     5881 atcattttat accttttagt gaaaaagaac taggtatcac aaaagaagct tttgagagtg
     5941 attttatgta taaatttata aatggcaaga taaaagatga aaattcgctt tttggcgatg
     6001 agttagcaaa gatagaattt agtcttgaag ctcaagagct cttaaaagca ggaaaagaac
     6061 tttttaagta ttatcatact catagtgaag ataaaaacta tctagccaat gcttcgcttt
     6121 atgatataaa agaatttttt caaggcagag atgaaaaaga taggatgaat cgtcctagcc
     6181 aagcaaaaga cgagcattat aaagctttgc ttagtgattt aaacatagct ttaaatgctt
     6241 tagctaaaaa gttagagcca aaaatttatg aatacggctt tttaaaagaa taatcatggc
     6301 aaaaaaacaa ctttctttaa caagacttag tattcctata ttttgggatt tgctttctaa
     6361 gtatttaact gtgattatca atactgctat ggtgtcgcat tattctaatt ttcttgtggg
     6421 tgctatgggg gctggaaatc aaattttaga tctttttatc actatttttt catttttaag
     6481 tgtgggttgt agtgtggtga tagctcaggc tattggtgca aaagatcatg ttttagcaag
     6541 aaaagtgatt catcaaagtt tgtttttaaa tgcactttta ggctttgtgt gtggtgcgct
     6601 tattttatgg catggggagt atttgcttta tcttttaaaa atcccacaag aattgcttaa
     6661 agatagtgaa atttacttac atatgcttgc aatttgtttg ttttttgatg ccataggaat
     6721 tgttttagcg gctattgtaa gggtttataa tatggcttat tgggttatgc ttataggctt
     6781 tttgatggat atagtggtga tttgtggaaa ttattatgtt ttgcattata caaaatcaga
     6841 actttttgga gtagggctta gcaatatttt tgctcgtatt gttgctatag tggctttact
     6901 tgtgatactt ttttataaac ttaaaattca tcttaaaatc aaagaaatga taaaacttga
     6961 aaaagaggta ttaaaaaagg ttttaaatat aggtgggttt tcagcaggag aaaatctttt
     7021 gtggatagtt caatacacta tagcttttgc ttttgtagca agcttaggcg agactagttt
     7081 gagtgtgcaa acgatttatt ttcaaatttc aatgcttatc atgcttatag gacaagctac
     7141 gagcatagct aatgaaatca tagtaggtaa attagtcggt gctagatata taaatatcgc
     7201 ttataaacat gcttggcgtg ctttatattt tagtgtgata gcgagtgctt tagtggcact
     7261 tttgaattat ctttgtcaag attttactat gcaaatttta gggcttaaag aagagctaaa
     7321 aaatttaatg atacctttat ttgctctttc aatctttctt gaaatttcac gaacttttaa
     7381 tatagttatg gttaattcct tgcgtgcaag tggcgatgct aagtttccat tttttagcgg
     7441 acttgttttt atgatggggg tatctttgcc tgtgggttat gtgctttgtt tttattttaa
     7501 tcttggaatt ttaggggttt ggataggatt ttgtgcggat gagtttttgc gtggaatggt
     7561 aaattcatat agatggaaaa gcaaaaaatg gcaaggcaaa gctctagttt aaaatctttt
     7621 atttataaag atgagtgtta tttttattct aaaaaacgca taaaaacttt aagattaagg
     7681 ctcaatgaaa ggggtgagtt tgttcttagc attccttatt tttgcacctt taaaagtgtt
     7741 tatgagtttt tagataaatc aaacccttgg ataaatgagg caaaaaaaag atttgaaaaa
     7801 aaagccttaa aagatgatga gttaatcttt t
//
LOCUS       DARBAC010000076         7807 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.076, whole genome shotgun sequence.
ACCESSION   DARBAC010000076 DARBAC010000000
VERSION     DARBAC010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7807)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7807)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7807
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.076"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1182)
                     /locus_tag="SB799_001278"
     CDS             complement(<1..1182)
                     /locus_tag="SB799_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEG0868514.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKVVKASGLVEKIGEQNSKVILKNV
                     LNNESFERELMINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANVAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAFVSSRAASLLEKDKSELNVISAHLGNGASVCAIEKG
                     KSVDTSMGFTPLEGLVMGTRCGDLDPAILPFISHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFELNKQRISGERMINHANSKVKVLVIPTDEELEIARITEEL
                     IS"
     gene            complement(1196..2701)
                     /gene="pta"
                     /locus_tag="SB799_001279"
     CDS             complement(1196..2701)
                     /gene="pta"
                     /locus_tag="SB799_001279"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEG0868515.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLEEYDFITPHRFKYELIKQSVKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDAARLSLDLSTIQIMNPLNSEYNQEFTSILYEARKSKGMSLEEA
                     KMLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPTAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            2791..3489
                     /gene="flgH"
                     /locus_tag="SB799_001280"
     CDS             2791..3489
                     /gene="flgH"
                     /locus_tag="SB799_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HEG0868516.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            complement(3519..4592)
                     /gene="ispG"
                     /locus_tag="SB799_001281"
                     /gene_synonym="gcpE"
     CDS             complement(3519..4592)
                     /gene="ispG"
                     /locus_tag="SB799_001281"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEG0868517.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAIYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDEVKSRAVKE"
     gene            4715..5239
                     /locus_tag="SB799_001282"
     CDS             4715..5239
                     /locus_tag="SB799_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEG0868518.1"
                     /translation="MDFFKNGGVIWITGLAGSGKSYIAEALYKKLKEKYNNIIYLDGD
                     ELRDLLEHYGYDKQSRIDMSIKRSKFAHFLSSQNMLVIVSAISMWNEIYEHNKKTLKN
                     YFEIYIKCDFEELKKRDKKNLYSKNLKGEISNVVGMDIDFDEPKSNLIIDNTYMTELD
                     NKISYILTALKEKK"
     gene            5250..6641
                     /locus_tag="SB799_001283"
     CDS             5250..6641
                     /locus_tag="SB799_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HEG0868519.1"
                     /translation="MQNLLLYIKNNLTPTLAQILLQALKNSNNEKFFTFVLKNIETIC
                     TWLNSSEFKNRYLSIKHPYPPLINPNFIEIDASRHCAELAWDLNLPLPKHYKFIYISP
                     HGVGAAAFLRYLNQCCDVTCFASWVLPPDAKERYCLNYMCLNDNTITQYAINISEINL
                     PYFDKYLSLLDFNSKIICGVRDPIGILKHNWGRDWSKVLRNYPSEFNLTYDWRYYIDY
                     LTHQNHKIKIDINELQQGVFIISYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINF
                     NFTPPHKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYLNTPKNNKNFNIDKTS
                     SIPIILDRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLY
                     DFLYQIKITIDETESKMMKEKDVIDYFIKNKSLVYTFFNIFENDLNHLKQKFPNIINS
                     WTYYKEFEKCVKS"
     gene            complement(7556..>7807)
                     /locus_tag="SB799_001284"
     CDS             complement(7556..>7807)
                     /locus_tag="SB799_001284"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868520.1"
                     /translation="FAIVCLCLYFNLEVKIIASAISAYAVSISLVLNAYSIFEKTRAD
                     KFNLTMQLLSKWDEKHFIEARDYTREQQNIKEKKEMKKY"
BASE COUNT         2770 a         1322 c          983 g         2732 t
ORIGIN      
        1 gcttattaat tcttctgtga ttctggctat ttctaattct tcatctgtag gaataacaag
       61 cactttaact ttagaatttg catgatttat cattctttcg cccgaaatcc tttgtttgtt
      121 aagttcaaaa tctaactcga taccaagatg agctaatctc tcacatactt tttgtcgaac
      181 caaactatca ttttctccta tgccacctgt aaaaataata gcatcggttt ttggcaacac
      241 agcaaagtag gatcctatat atttaacaag acgataacaa aacatatcaa gagccaagcg
      301 tgctttatca ttaccttgtt ctatctctct ttctatatct ctaaaatcat tataaccgca
      361 aattccatat actccacttt ttttattcat cagtgtatct atttcttcta tggttaaacc
      421 cttaagatga ctaataaaag gtaaaatagc aggatctaaa tctccacaac gcgttcccat
      481 aacaagccct tcaagcggag taaatcccat agaagtatcc acactcttac ctttttctat
      541 agcacataca cttgcaccat ttccaagatg agcagagata acatttagtt cacttttatc
      601 tttttcaagc aaacttgccg ctctagaact gacaaaagca tgagaagtcc catgaaaacc
      661 atatcttcta atattatgct tatcataaaa atcataaggc aaagcataca tataagcaaa
      721 atcaggcata gtacgatgaa aagctgtatc gaaaatagcc acatttgcaa cactaggtgc
      781 agctttaatc attgttttta tacctgctaa atgggcagga ttatgcaaag gagcaaaaat
      841 actaacccta tctatctctt taagaacata gtcatctact aaacaatgct cacttaaatt
      901 tcttcccccg tgaactatac gatgaccaca gccatcaaga gcatttaaat ccgctaaaat
      961 tcctgattct ttaaaaagct cattgactat actaagtcct tcttcgtgat tatttatcat
     1021 taattctctt tcaaaacttt cattatttaa aacatttttt aatataactt ttgaattttg
     1081 ctctccgatt ttctctacta aaccactcgc tttaacgact ttattatcaa aaaatttaaa
     1141 tttaatcgat gaagaacctg aatttaaaac taaaattttc atttattatt cctttctatt
     1201 gagcttgtat agcacttaaa ataacagtat ctacaatatc atctaccaaa catccacgac
     1261 ttaaatcatt aacaggtttt ttaagacctt gcaaaatagg accgattgct aaagcattag
     1321 cagttctttg aactgctttg taacaaatat ttgctgcatt aagatcagga aaaatatata
     1381 catttgcatg gcctgctatc ttagaatttg gcattttctt tgctgcagtc tttggatcat
     1441 aagcgcaatc aaactgcata ggaccatcta tatttaactc agggtatttt tctttagcaa
     1501 tctttaatgc ttcttttaca agatctacgc tttctccctt accgctatca ccactagaat
     1561 aagaaagcaa agctattctt ggttcaagtc caaaagattt agcagtcata gcacttacat
     1621 aagcactagt tgcaagctgt tcagcagttg gacttggatt tacagcacaa tcagcaaaag
     1681 ctaaaacttg atcttcaagc cccataaaga aaattcccga aacagaacta ataccttctt
     1741 tggttttaat aagctgcaat gcagggcgaa tcgtttcagc cgtagtagtt gatgctccac
     1801 taaccatagc atcagctttt ccagtatgta taagcaaagt tccaaaataa gttttatcct
     1861 gaactagcat cttagcctct tctaaactca ttcctttaga ttttcttgcc tcataaagaa
     1921 tggaagtaaa ttcttgatta tattctgaat tgagcggatt cataatttgt atagtactta
     1981 aatcaagact taatctagca gcatcttgtt tgattttttc ctcatcacct aataaaataa
     2041 gatcaacaac tttacttttt aataaaattt cagcagcttt taaaattctc tcatcattac
     2101 tttctggcaa aacaacagtt tttttatttt ttacgctttg tttaatcaat tcatatttaa
     2161 aacgatgtgg agttataaaa tcatactctt caagcttttg cacttcctca aaattaaaat
     2221 tttcattaat caaaacataa ttacgaccat ctagggcatg atcgaaatat ttttgagcta
     2281 taagtttatc ctcatcgtta ataatagcag cgataggggt attaagattt ttagccaatt
     2341 ttatactaag atcaaatcca tcaagtattc caaattcgca aaagctattt acaagcacaa
     2401 aatcgtattt gcgttttaac tcttcgtatt cttctaaaat aacattaaaa aaattatgag
     2461 gatctttgct aaattcctcc attgcttctc taaaggtaaa accataagcg ctttttacag
     2521 tttgattgat attaaattct tccaaccaac cttgcaaaac agggacgcga tgtatgtata
     2581 ttacagggca ataaattgcg atatttttgt aaattttgct ataattttta agcaaatttg
     2641 tactaataat agtatttaac tcatcacttc tagatctcat caaataaaga tttgccatca
     2701 ttttctcctt gaatttataa atgtggaaca ctctttgctt tttctaattt taacaaagaa
     2761 aaataaaaat tcatatttta aaggacgaaa atgaaaaaag ttttatttta tgtgttaccg
     2821 tttgcgtttt ttggttgttc tgcaacggtt gatccgcaaa tttcaatgaa accacctgct
     2881 tatgtagaag aacttgcacc aaaacaaagt aataatgtag aaagtgcacc aggatcgctt
     2941 tttggcaaag gggataatcc tttattttca gataaaaaag ctatgaatgt aaatgattta
     3001 gttacagttg ttatacaaga aagtaccact caaagcacac aagctaataa agcaacaagt
     3061 agaactaata cctcaaattt aggcggaggt gctttaacag gaagttcagg agtggtagct
     3121 aatgctctta ataaagtcaa tgcttattct aatataggct ttcaaaccaa tagttcaaac
     3181 aactacacag gaacaggctc acaaagcaga aatgaaagtt tcaatactac aatttcaacg
     3241 cgtgtaatta aaattttatc aaatggtaat tattttatcg aaggctcaag agagctttta
     3301 atcaacggag agaaacaaat catacaatta agcggtgtta ttcgtcctta tgacatcggt
     3361 caagacaata ctatagatag taaatatata gcagatgcta aaattcttta taaaacagaa
     3421 ggtgaagtgg atagaagcac aagaaaacct tggggtagca aagttataga agcgatatgg
     3481 ccattctaaa agcaaggtta aaccttgctt cttggctttt attcttttac agccctactt
     3541 ttaacctcat cttcaacttc agctaaaaat ctatctacaa gttcactttc ttttaattta
     3601 gctacaactt caccatgtct tataacaagt ccttgatttt tcccaaaggc tatagccaca
     3661 tcagcgccct tagcttcacc taaagcattt actacacaac ccataacact gatatttaaa
     3721 ggttctttta tatgcttggt tttttcttct acgattttaa tcgcgcttaa caaatcactt
     3781 tgaatcctac cgcaagttgg acatgagatg atatttactc cgcttttttg cactccacta
     3841 tcttgcaaaa tcgctcttgc tacacgaatt tcctcttcaa gctcacccgt catagaaaca
     3901 cgcatagtat cgcctatacc tttaagaagt aaatttccta aagctataga actttttaca
     3961 gtgctatgaa atttagttcc tgcttcagtt acccctaagt gaaaaggata atcacaaagc
     4021 ggtcttaatc tctcataagc ttctatagtt ttttgagcat ctgaagtctt catggaaatt
     4081 ttaatatcaa aaaagtctaa atcctctaaa agcttgatat tatatatcgc actttctagc
     4141 atagcatcga caccatagcc aaatttatca ctaaattgtt tttctatgga gccgtgattt
     4201 acaccgatac gtatagggat accccgttct ttacatgctt ttaccacttc tttgatattt
     4261 tctttagaac ctatattgcc aggatttata cgcactccat cgataaattc agcacaatat
     4321 acagccaaat tatgattaaa atgaatatct acgattaaag gtagaggact tttagcttta
     4381 atctctttta aagcccttgc atcagccata tccaagcacg ccaaacgcac tatgtttgct
     4441 cctgcaaaat aaagacgatt gatttgttct aaagaacctt ctatatctct tgttttagta
     4501 aaaagcatag attgaactga aatgggtgca tcaccgccta ttaaaacatt tcctactttg
     4561 atttgtctgg ttttaaatct tttatactcc ataacttcac tctttgaaaa attttaatat
     4621 caaattttaa ctttttattg ctttaattaa agtttatttt tgataatata ggaaaaattt
     4681 ttacatttat actaaacaaa aaaggaggtt atctatggat ttttttaaaa atggtggagt
     4741 tatttggatt acaggactag caggaagtgg caaaagttat attgcagaag cattatacaa
     4801 aaaattaaaa gaaaaataca ataatattat ttatcttgat ggcgatgaac tgagagatct
     4861 tttagagcat tatggatatg ataaacaaag tcgtatcgat atgtcaataa agcgttctaa
     4921 atttgcacat tttctcagtt ctcaaaatat gctagttatc gtaagcgcta tttccatgtg
     4981 gaatgaaatt tacgaacaca ataaaaaaac tttaaaaaat tactttgaaa tttacataaa
     5041 atgcgatttt gaagaattaa aaaaacgtga taaaaaaaac ttatatagca aaaacttaaa
     5101 aggtgaaatt tcaaatgttg tgggaatgga tattgatttt gatgaaccaa aatctaattt
     5161 aataattgat aatacttata tgacagaact tgacaataaa atttcctaca tcttaacagc
     5221 tctaaaagaa aaaaaataaa gaaaaaagca tgcaaaatct tttactctat ataaaaaata
     5281 acctaactcc aaccctagct caaattcttt tacaagcttt aaaaaattcg aataatgaaa
     5341 aattttttac ctttgttttg aaaaatattg aaacaatttg cacttggctc aattctagcg
     5401 aatttaagaa tagatattta tcaataaaac atccttatcc acctttaatc aatcctaatt
     5461 ttatagaaat agatgctagt cgacattgtg cagaattagc ttgggattta aatttacccc
     5521 tacctaaaca ctataaattt atctatattt ctccacatgg cgttggagca gcagcatttt
     5581 taagatacct taatcaatgt tgcgatgtaa cttgttttgc ctcctgggtt ttaccacctg
     5641 atgccaaaga aagatattgt cttaattaca tgtgtctaaa tgacaatacg attactcaat
     5701 atgctattaa tatatcagaa attaatctac cttattttga taaatatcta tctttattgg
     5761 attttaactc taaaattatt tgcggagttc gcgatccaat aggaatttta aagcataact
     5821 ggggaagaga ttggagtaaa gttttaagaa actatccctc tgaatttaat ctaacttatg
     5881 attggcgtta ttatattgac tatcttactc atcaaaatca taaaattaaa atcgatataa
     5941 acgaactaca acaaggagtt tttatcatct cttatttatt aaaatatttt aacaaagaca
     6001 atgtatacta tcttgatatg gaagaaatcc gccaatcaaa ggccttcgat accatgaatt
     6061 tacttgctat aaattttaat tttacccccc cccataaaga taaattagat ttatttaaaa
     6121 ttaaagaatt tagaggttat attcgctatc tttttcctat cacactctat gcaaattcta
     6181 aagatattaa taacaccttt tatcttaata ctcctaaaaa taataaaaat ttcaatattg
     6241 ataaaacttc tagcattccc ataattttag acagaaaaca tatcaatcat gaaaaaatag
     6301 acataataca agaaattata aaaaacgatc tatgtaatga tatgggtgta tatattgata
     6361 aaaatgattt taaacaatta gaacaaaaca atcttttatt ttcaacaatt aaacattatt
     6421 tgtatgattt tttatatcaa attaaaataa ccatagatga aacagaatca aaaatgatga
     6481 aagaaaaaga tgtaatagat tattttataa aaaataaatc acttgtttac acttttttta
     6541 atatttttga aaatgatcta aatcatttaa agcaaaaatt tcccaatata attaactctt
     6601 ggacatacta taaagaattt gaaaaatgcg tcaagagtta gatgacaata ttcagggaaa
     6661 agatgtaagg ggtattttaa aaagagtatg taactatccc taaataattt tagcaaaaaa
     6721 taccaaataa taggatttta aagcttacaa aaatgacttt ttatctttcc tagtttaaag
     6781 tgtaaaaaat cccaaatatc ccaaaaatcc caaaatgtct gttttatccc aaaaaaactg
     6841 attaaatgct gtttaaaagg cggataaata cgagctttga ttttaaattt tatatcccaa
     6901 aagtgttttt tactctctag gatagttaca tttttgctta aaatattctt atatttttta
     6961 accttgtaac tatctctata aaacactata taatcatact ttaaccactt tttatataaa
     7021 aatagtatgt aactatctat agctttaagg tttggaggat agttacatag aaaacttaaa
     7081 catttagttg gtttttataa tcttataata gactaagatt acttcaattt atttaaaaat
     7141 tatttttatt tttgatttta ttttttaact ttgatgataa cttttgccaa ttataatgtt
     7201 ttttaaaaga taaatataaa gagtgattaa cttttataga aatatatagc tatatttagt
     7261 tttaggtttg taaatatagc tacattattt tttaaattaa attatgatat ataggtattg
     7321 catctatttt ttaattttat aagtttttta agccccaagg gattattttt tttgaaatca
     7381 tcgctattta agtaacaatc atacctttcc aagatatctt ttaacatatg tgcaaaatgc
     7441 tccattataa taccttcatc tatcctatta ttttcaataa aagtttgaag tgtttcaaaa
     7501 taattcatca tcattataat tgatcttttt aattctggtt tttctttaat ttcttttaat
     7561 atttcttcat ttcctttttt tcttttatat tttgttgctc tcttgtataa tctcttgcct
     7621 ctataaaatg tttttcatcc catttagata ataactgcat tgttaaatta aatttatccg
     7681 ctcttgtttt ttcaaaaata gaataagcat ttaacaccaa tgagattgac accgcatagg
     7741 cagaaatggc agatgcaata attttaactt ctaaattaaa atataaacat aaacatacga
     7801 ttgcaaa
//
LOCUS       DARBAC010000077         7805 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.077, whole genome shotgun sequence.
ACCESSION   DARBAC010000077 DARBAC010000000
VERSION     DARBAC010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7805
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.077"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(12..1814)
                     /locus_tag="SB799_001285"
     CDS             complement(12..1814)
                     /locus_tag="SB799_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEG0868521.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPILKTWEDDAGKFITMGQVYI
                     QNLDKTQNNLGMYRLQMSDKNELLIHWQIHKDGANFYHEYKNVGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKLTPCENGIFVPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LLQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYMLDRFNTKKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(1811..2734)
                     /gene="hemC"
                     /locus_tag="SB799_001286"
     CDS             complement(1811..2734)
                     /gene="hemC"
                     /locus_tag="SB799_001286"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEG0868522.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPRGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(2731..3120)
                     /locus_tag="SB799_001287"
     CDS             complement(2731..3120)
                     /locus_tag="SB799_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HEG0868523.1"
                     /translation="MNYKLSLSPLFVLEIIASILFIVFFGFGNFLFFILLSMIFGVIL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLIFPGIITSVFGIFVFFFGIALKLMTK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(3117..4826)
                     /locus_tag="SB799_001288"
     CDS             complement(3117..4826)
                     /locus_tag="SB799_001288"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEG0868524.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSHIFLTRAGFIEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEIKAQNACSALELVDASEEELEKAGLV
                     AGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCAKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVAIEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVIGKGLENNEIELIQREGLVKELIKTDELMEILKK
                     KVL"
     gene            complement(4810..6108)
                     /locus_tag="SB799_001289"
     CDS             complement(4810..6108)
                     /locus_tag="SB799_001289"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEG0868525.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNP
                     ISVASVAVAKAKELADLAQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELPYKRYFFDIAVPR
                     DIDINENENISVFAVDDLENVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(6108..7001)
                     /locus_tag="SB799_001290"
     CDS             complement(6108..7001)
                     /locus_tag="SB799_001290"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HEG0868526.1"
                     /translation="MQKIDELIKQFLEELGYEPILNMLSNVKSGKKLRSKLLLAIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFTSIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(7015..7551)
                     /locus_tag="SB799_001291"
     CDS             complement(7015..7551)
                     /locus_tag="SB799_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HEG0868527.1"
                     /translation="MFKISPYLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(7554..7799)
                     /locus_tag="SB799_001292"
     CDS             complement(7554..7799)
                     /locus_tag="SB799_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HEG0868528.1"
                     /translation="MFNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAMVELLEKQG
                     LTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
BASE COUNT         2614 a         1513 c          846 g         2832 t
ORIGIN      
        1 tctcaattat cttaaaaaat ttcaaattta ttaaaaagat ctggattatt ttctaaaata
       61 ttacgcaaga tcaaatcttc tatcacgctt ttagtgcaat ctgtttgctt aggccaagct
      121 cttaaataac cctcagcttc acctttagca cttgcatcta ctccaagtct ttcttctttg
      181 ataaaaatat ctcttttagc atctatatta tttaccacac gccaaacaag catataagaa
      241 ttttcaagct tattttcagc atctaaaaac actaaaatcc taaaatgttt tttaaattct
      301 aaaagtttgt caaaactttg ttcgattttt tcttttttat caagcaaaat acaaactata
      361 ggacttttac tttctttata aaattgcttt aaatttaaaa gttctacctt agttttaaaa
      421 agttctagta atttttcatc ttctaaaatt tcaagctctt caacttgtat ttcttcgcaa
      481 gcatcaagtc ctgctttacc cccaaaacaa gaattaggtg aagcatgatc taattgatca
      541 caaattcctt ctgaaattaa aattttcttt gtattaaaac gatctaacat ataaggaatt
      601 aaagcatcat aatctttcaa agaaggtgca tttttatcca caaaaattgc atgcttaaca
      661 aaactcattt gccctactcc ccaaaatgca tgcataattt gttgcgcatg agcgggatat
      721 tttgcatcga tttttgctaa gataagatta tgaaagaccc cattttcagg catattataa
      781 tcaattaaat caggtactga agtttgaagc aaaggtaaaa aaattctttc agtaccaagt
      841 cccatgatct tatcttctaa aggaggcttt cctacaaccg ttgcttgata gatcgcatct
      901 tttttagcat aaattttttc tactttcatc acaggaaaaa gttcagcagg agtgtaaaaa
      961 cccgtatgat ctccaaaagg accttcgatt ttaaactctt ctaaatccac ataaccttca
     1021 ataaccacat cactatcata aggtacaaaa ataccatttt cacaaggagt aagttttgca
     1081 ggagtttttt taataaaacc ataaagtaaa agttcaaaaa ttcccttagg taaaggtgct
     1141 tgagaacacc aaatataaag cggatctcca cctatggcta tacttacagg cattttttta
     1201 aaaccaacat ttttgtattc gtgataaaaa tttgccccat ctttatgaat ttgccaatgt
     1261 attaaaagtt catttttatc actcatttgc aaacgataca ttccaagatt attttgagtt
     1321 ttatctaaat tttgtatata aacttgcccc atggtaataa atttacccgc atcatcttcc
     1381 caagttttta gtatgggaag ttcttcaagt gagtttaaaa tttcataatc atacaaggct
     1441 ttattttttt tcagtctttt aggaggaata tttttaaaac ttaacaaatt cataaaaaaa
     1501 tccatttttg ctttaaaact cgtaggaata tgaagcttgg tgagttttga aatttcttca
     1561 gccacctctt cataatcacg tccaaaagct aaatttaaag ccttttcatt gcaaaaagta
     1621 ttcatcaaaa caggaaattt atattgttta tttaattttt tatctatagg atttttaaat
     1681 aataaagcct tccctttttc tcctttttta gcttctatat aggctaaatg agcgatttca
     1741 agatctacat ctacaggctc ttcaattacc cttaaaagat cattttcttt taaaatttga
     1801 ataaattctt tcatatcata ctctcagctt tttttaaaag ttctttagca cctttagcaa
     1861 taaactcctt agccaaactc tctccaaaac ctttaaaatc attcttttta atcattcttt
     1921 tatcttttaa aatttcactt ccatcgggta gtccaagtac cgctcgcaca caaatttcat
     1981 ctcctaaaag ctctgcgtta atacctatag gaacttggca acccccttct aaagtagcaa
     2041 taaattctct ttcaatgctt gtttcaatca aagcattttc atcatttaaa cattttaaaa
     2101 gttctaaaat tttttcatca tttatgcttt ctatacctaa agctccttga gaagccgcag
     2161 gaataagctc atctttgcta aattcataaa caaaattcac ttgcttatct aaatttaagc
     2221 gtttaattcc cgccatagct aaaataatcg catcaaaatc attatttttt aatttctcta
     2281 tacgagaatt aacattacca cgcaaagaaa taatctctaa atcaggtctt aacaataaaa
     2341 gctgcatttt acgtctaaga ctagtggtgc ctatttttgc accttttggc aaagaaagaa
     2401 aatctttata attttgactt agcatagcat cattactttg ctctctttta cttaccgctg
     2461 ccaaaactaa acctcgagga aaaaaactag gcacatcttt taaactatgc accgctaaat
     2521 gcgcttcttt tcttaacata ctttcttcaa gttcttttgt aaaaagtcct ttaccaccaa
     2581 tttttgccaa aggagaatcc agcaaaacat caccttttgt tttaaaacct tctaaaagca
     2641 cttcaatttg atgtgtattt tttaaaattt gggctacatg ctcactttgc caaagagcta
     2701 attgactttt tcttgttgcg ataataagct tcattttcta tcctctataa tttcaacatc
     2761 aatgatttct tcattagaat tttgatactc ttgtttagtg tattgatatt ttgatttagt
     2821 cattaatttc aaagcaatac caaagaaaaa tacaaaaatt ccaaaaacac ttgtaataat
     2881 ccctggaaaa ataagcaaaa accctgcgat aacaaaagaa aattgtgtta acatatcctt
     2941 taagccaccc atttgaaatt caagcatatt tttccaaaaa attcccaata aaatcacccc
     3001 aaaaatcata ctcaaaagta tgaaaaataa aaaattacca aaaccaaaaa acactataaa
     3061 aagtatactt gcaataattt caagtacaaa taaaggactt aaacttaatt tataattcat
     3121 aacactttct ttttaagaat ttccataagt tcatcagttt ttataagttc ttttaccaaa
     3181 ccttctcttt ggataagctc tatttcatta ttttctaatc ctttaccaat aactaacgca
     3241 taaggaaaac ccataagttc aaaatcattc attttaaccc cgaaacgctc atttctatca
     3301 tcaagcaata cctctaatcc aagattagtt aaatcctcat aaagcttatt ggcaaattct
     3361 aaagcctttt catctttgag atttgaaaca ataatttcaa gcacaaaagg agctaaagtt
     3421 ttattccaaa tacatccttt ttcatcatga cttgcttcaa tagctacagc caacaagcgt
     3481 gaaacaccta tgccataaca tcccatgtaa aaaggctgac ttttgccatt ttcatctaag
     3541 aaatttgcat tcatcgcttt agaatatttt tgtccgagtt taaaaatatg ccctacttct
     3601 atacctttgc tttgttttaa ttttgctcca catttagcac agcaatcccc ttctttaact
     3661 tcaatcaaat ctttaaaacg atctttgttt aaatttacaa catcaatacc gattaaatga
     3721 taatcttttt cattcgcacc cataatcatt tgtttttcgt tttcaagctc aaaatctata
     3781 taaaaatcta tatcttttaa tcccacaaaa cctataaaac cggctaccaa accagctttt
     3841 tctaattctt cttcgctcgc atcaactagt tcaagagcac tacaagcatt ttgcgccttg
     3901 atttcttgca aatcatcact tcctcttata aaaaacacaa ctaatttgct ttcattttcg
     3961 taaatagctt tttttaccac tgctttaatc gtataaaaag cattgatttt aaaaaattgt
     4021 gctaaagaat ctatagtttt aatatttgga gtgtgaaatt tgcttgcata atttgcttca
     4081 ggacgctcat cttgacaagt ttttttagct ctttttgcag cttcaacatt agccgcataa
     4141 tcacaatttt cacaaattaa aatatcatct tccccatttt ttgctaaaac cataaattcc
     4201 ttagaaccac ttccaccaat agccccacta tcagcttcaa ctgctctaaa atcaagcccc
     4261 attctttgta aaatttgaga ataagtttta tacataagct caaactcacg ccctaaatct
     4321 tcttcattag catgaaaact atatccatct ttcattaaaa attcacgaca tcttaaaagc
     4381 ccgaatctag gccttgcttc atcacgaaat ttaagtccga tttgatataa atgtaaagga
     4441 agttgtttat agcttgtgat tttatttttt accaaagaaa gcatagcttc ttcatgtgtt
     4501 gggcctaaaa caaattcatt ttcttttctg tctttaaaac gcaaaagctc ttttccaaaa
     4561 acattataac gcccactttc ttgccacaaa cttgcaggag tgataaaact aagatttact
     4621 tcttgtgctc cagctttatc catttcttct ttaactatat ttttaatctt gtctaaaact
     4681 ctttttccta aaggcaagaa attataaagt ccactgccaa tttgttctat aaaacccgca
     4741 cgcgttaaaa aaatatgact aggcaaactc gcatcttttg gtgcttcttt taaacttggt
     4801 gcataaaatt tagtaaatct catcattatt ctccatatca aattcacatt tatattgatt
     4861 taaaccttca agattatttt gcaaatcaaa aacataacgc atagcattaa tcactgtatc
     4921 actttgcatt ttaccttgta aatgtttcaa atttacagta ggcgtgtgta aaaaagcctt
     4981 aaaaacttga tgaatcaact ttctagcttc ttctttatca gattttttca aatatccttt
     5041 ttttaacgca atttcaagtt gtttatctgc atattcttta gcttgcaagc gtatggcttt
     5101 gataataggc atcaaagcca aatcgtttaa atatctaaaa aattcacttg tttcacgacc
     5161 tattatccca taagccatac gagcttcttg ttctcttaat gctaaatttt tttgaaccac
     5221 attctcaaga tcatctacgg caaaaacaga tatattttca ttttcattga tatcaatatc
     5281 ccttggaact gcaatatcaa aaaaatacct tttataagga agttcttcta ttagagaatt
     5341 tgtaataata gcatttggtg cattagtagc tgagaaaaaa aactcgtatt gatttaaata
     5401 tttttttaaa ttttctaaac tatcatattc gcttaaaaca ccaagtctct cgcacaaatc
     5461 tttggctttt tgtaaatcac gatttaaaat aatcacttta gcacccgcag caattaaatg
     5521 ttttgccgca agctctccca tctctccagc tccaataaca acagcttttt tttgcgctaa
     5581 atctgcaagt tcttttgctt ttgccacggc aacgctagct acagaaatag gatttttaga
     5641 aatttgagtt tcattgcgta ccttagcagc acatttaaaa gcactatgta ccgctcttga
     5701 aaggtgtact ccgcaaaaat tattttttac agcaaaagca aaggcatctt ttaattgccc
     5761 tgctatctga gtttctccaa ccaccaaact atccaaagaa cttgctacgg aaaaaagatg
     5821 atggattgct ccactatctt caaaaatatc agctttttca agtaaaatat ctttatccac
     5881 atcacaaagc aaagccaaag atttaacaat aaactccgca caggccattt ttacaaaagc
     5941 aacaatttca acacgattgc aagtacttat aaccaaacat tcttcaatat tttcatgagt
     6001 gctaatgatt tttaaaaact cacttttttt agcttcattg gaaaagctta acttttccct
     6061 taaggcaata tctgtatttt tatgagtaaa agatatacaa taatacatta aaattcccta
     6121 tctatcatag ctttaataat atcattaagc ttgttattat catatttttc aatcgcttta
     6181 ctagcctttt ttgcataagt tttagcttct aaaatagctt tttctaaagc tttttgttct
     6241 tcaaatttag tttttaacca ctctttttca ttttcattta aatctttttt aaataaagtc
     6301 tgcaaatata tcctatcttg ttcttgtaaa ttttcataaa gataaatata aggtaaggta
     6361 gtcttaccct ctttaaaatc attcatagca ggttttccaa gaattttttc atcactctta
     6421 atatctaaaa tatcatcaat catctgaaaa gcgagtccta aattttttcc atattctgca
     6481 aaatcttttt catataatcc agccaaaata gctccgcatc tcgcacttgc ttcgatcaaa
     6541 acagctgttt tattatagat cattttcaaa taagcttctt tattgatatt aaatttctct
     6601 cccaaatcaa catccataag ttcgcctata gcaagcttta caacagcatc tgaaataata
     6661 cttgtaaatc tagcatccat tttgcttaat tcataaaagg cttttgaata caaaatatcg
     6721 cccaacataa gagcattttt tgtaccaaat tcagcattaa cagatcttgc cccacgcctt
     6781 aattcactct catcgataat atcatcatgt aataaactag caagatgtat caattctata
     6841 gctgcacaaa ttttaaaagc aatctcactc tcatctgcga tagctaataa taatttagag
     6901 cgtaatttct ttcctgattt tacatttgaa agcatattta aaataggttc atagccaagt
     6961 tcttctaaaa actgttttat taattcatct attttttgca ctatcttttc cttgttaatt
     7021 gctattatta ttttctttgc ttgttaatgg ttttacctga ggttcgttaa aattaatcat
     7081 aggaacaacc tgattatttt gcggtggatt ttgtaaagct ttttttctcg gatctaaaaa
     7141 ttctaccatt aagcgagatt ccttatcttc tatataaacc gtaaaagttg ccaaaccttt
     7201 attataacca ctaaattcta aaataagtct tgctctatca atgtgtggat tggtataatc
     7261 aggtattaaa gtttgagtta cccaatctaa atttcttctt aaactcatca caaattgacg
     7321 cggatatttg cgaaatttcg aatgtacgat gatattagta ttatcaaaca aagtccaata
     7381 aaaatcaaaa ttttgcacct tatcttcata gcctatttct ttaatctgca cactagctct
     7441 ctcatctttt ttaagtataa atttataagt ataatcaaaa gttggttcag atgctaaaac
     7501 attactaaaa ataaaaaaaa tacaaattaa ataggggctt attttaaaca attttagcct
     7561 tcgtgtccta aaatttttgc acctaattct atataaatat cattttgcct ttcttctatg
     7621 aaatcaccat tttctaatat gaaatttttt acatccattt ctgttagacc ttgtttttcc
     7681 aaaagttcca ccatagcaat atgatcagca aaaaattcct caaaaacttt ttctaaggct
     7741 cctaaatttc cattttgtat aatttctata aatttttctt ttggagtttt attaaacatt
     7801 tcatc
//
LOCUS       DARBAC010000078         7733 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.078, whole genome shotgun sequence.
ACCESSION   DARBAC010000078 DARBAC010000000
VERSION     DARBAC010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7733
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.078"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..342)
                     /locus_tag="SB799_001293"
     CDS             complement(<1..342)
                     /locus_tag="SB799_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEG0868529.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLILMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINQKYYHYD"
     gene            complement(344..1033)
                     /gene="dut"
                     /locus_tag="SB799_001294"
     CDS             complement(344..1033)
                     /gene="dut"
                     /locus_tag="SB799_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HEG0868530.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFAWKHWKNISSPTNWENVRIEIVDIWHFILSLLLEEYRDKNGKDLKAIA
                     TEVNAVSVFQDFCKEEEYPNEGDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNHGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEECYKKA"
     gene            complement(1069..1632)
                     /gene="ciaI"
                     /locus_tag="SB799_001295"
     CDS             complement(1069..1632)
                     /gene="ciaI"
                     /locus_tag="SB799_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HEG0868531.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSVSYTNNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLAKSKVGELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTNNKDINTSMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            1708..2115
                     /locus_tag="SB799_001296"
     CDS             1708..2115
                     /locus_tag="SB799_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868532.1"
                     /translation="MDERILEFIKNEQLLSWAVIDEKGVYTASAFYAFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIAKESKIAFLKGVQAKAEFKMASKEQMKIYFSKFPFAK
                     LDKSAKIYALELFWLKFTNNALGLSKKLEFCKK"
     gene            2187..2969
                     /locus_tag="SB799_001297"
     CDS             2187..2969
                     /locus_tag="SB799_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868533.1"
                     /translation="MLNVIHALFFRELKTRFGANRHLGYLWVVGEPMSITLAITAIVT
                     IIREYHHQVMPEGISIFMFLISGIMPYFMFRSIVTQLMNGTQANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFITVLFFVGWFFRFDVFPVHLLGVLFCIFLLMCSAFALGVCFA
                     IIWHFVEPLRTLLTYFSIVFYWTSGVILPTWLTPRPLLDILYYNPLLHIFELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFVYYYNRQALTAVKKE"
     gene            2966..3628
                     /locus_tag="SB799_001298"
     CDS             2966..3628
                     /locus_tag="SB799_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868534.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGGNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGQE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQG
                     KA"
     gene            3628..4746
                     /locus_tag="SB799_001299"
     CDS             3628..4746
                     /locus_tag="SB799_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEG0868535.1"
                     /translation="MEENKTLLEKIKDLSVFDSFKIVWFIMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTSGILSLLSSTSTASEDLNYLKGYIESSDMLKILDEKIKLKSL
                     YQEQHIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLQVEVEGFTPKSAHLIAQT
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQA
                     EAKASLVAQIETNLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            4748..6406
                     /locus_tag="SB799_001300"
     CDS             4748..6406
                     /locus_tag="SB799_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEG0868536.1"
                     /translation="MKKILILLFSCILCFGAVDVSQIISAEDQGSTTTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGSVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKPGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            6416..7363
                     /locus_tag="SB799_001301"
     CDS             6416..7363
                     /locus_tag="SB799_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEG0868537.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEE
                     ILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKARNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKARDKLRFDFKAKEIMSTNPKVVDA
                     DAMAGEAEEIMLKYKIKEIIVGKEEKVVGIIQLYAIGNV"
     gene            7363..>7733
                     /locus_tag="SB799_001302"
     CDS             7363..>7733
                     /locus_tag="SB799_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEG0868538.1"
                     /translation="MALLSVIIPFGLSKERPYIEERVLQKAKSFQSDENIEFIFVEGY
                     SSKDHELKNFIQTNHHIYLKDMNQKAFSQGRCRNLGASYAHSNVLLFLDVDCYISLDN
                     FEKILKLVQIKNISQNINALVV"
BASE COUNT         2654 a          992 c         1354 g         2733 t
ORIGIN      
        1 atcataatgg taatattttt ggttgatttc tttagcgata aaaggagtaa gaaaagaagt
       61 gataaaaagg gctaaaaaaa ccgaagcaaa aacaacaata aaacctgaaa ataaaaaact
      121 tatgatggtg attaaaattt gtacaaaatg aagggcataa aaccacgccc aaaacgaatc
      181 ttctccaacg ctaaataaag aattaaaata atcaagcaag gccgaaaagc caagtactcc
      241 taaaaaaagc atcagtataa ggctaaaaat caaaggaatt aaggcaaatt ttaaaaattt
      301 aagacttaaa aaatctttga ttgcaagttt taaaatatcc aaattatgcc tttttgtagc
      361 attcttctag ttttttataa atagtatcaa aatcaagctc ttgttctaaa atttgagcta
      421 aaacttcatt gtcttctttg ccattccaag tttttttata gctaccatct ttgtaaccat
      481 ggttttgtct aaagatattt aaaacatttt tacctatgta ggttttataa agaatttcaa
      541 gattaagccc acatttaata gctagggtaa aataggttga aagtaattct ccaagattaa
      601 atccaaaacc actgcattta tggataataa gctctatatc atttaaaatg ccataaatat
      661 caccctcatt agggtattct tcttctttgc aaaaatcttg aaatacgctt acagcattaa
      721 cttctgtggc tatagctttc aaatcttttc catttttatc gcgatactct tcaagtaaaa
      781 gacttaaaat aaaatgccaa atatcgacaa tctctatacg cacattttcc caatttgttg
      841 gacttgaaat atttttccaa tgtttccatg caaaagagtc tataagttct gcacattcca
      901 tataaataca gcgtctccaa ctgatcagtt ttccttcttt ggtgtagcca ttttcccaat
      961 ttaagccgtt tgtttcatcg ttgagttttt gttggagttt gagcatattt tctaaaattt
     1021 cgatatttgt cattaaaaac tccttgataa tttttaatat tatatgattt aagcgtaaag
     1081 atttaaacta tcatctgtct tatcttgatt ttccttggct ttttcttgtt gtttttcaag
     1141 ttgttttttc atttgttcta aaacttcatc aagaagtttt ttgctatctt caagcataga
     1201 agtgttgata tctttattat ttgtttgatt ttgttttagt aaatcactga gtttatttgt
     1261 aaaattattc ataatagcat tttgatggtt ttcatcattt ggtgttggta gaacatttgc
     1321 catttgcata gctgattcta taatttcttt tggctttaac tctccgactt tagattttgc
     1381 taaaaagtct ttgatcatag gttcaacttc tttcatagca tttttaatct catcaagatc
     1441 attttgcgtg agcttagagc cttcaaaagt aaagctaaag ccatactgac gcttaagatt
     1501 aagagtttta ccttcttcat tatttgtata actcacgctt tgattgtcat acatagataa
     1561 ggctaaatgt ttgccacttt ttgttgtata atccatcgaa aaactttggt ttttgctagc
     1621 atcaatttgc atttcttccc cttatattta tagtttaaat taaaaatcgg ttatttttaa
     1681 aaatatttta gtataatttt tataatcatg gatgaaagaa ttttagaatt tataaaaaat
     1741 gagcaacttt tatcttgggc tgtgattgat gaaaaaggtg tttatacagc tagtgctttt
     1801 tatgcttttg atgagaagaa tttagctttt attatcgctt ctcatgaaga tactaagcat
     1861 ataagattag ccagtgaaaa ttcaagtata gcacttaata tagccaaaga aagtaaaata
     1921 gcctttttaa aaggtgtgca agctaaggcc gagtttaaaa tggcaagcaa ggaacaaatg
     1981 aaaatttatt tttctaaatt tccctttgct aagcttgata aaagtgcaaa aatttatgct
     2041 ttagagcttt tttggcttaa atttactaac aatgctttag gacttagtaa aaagcttgaa
     2101 ttttgtaaaa aataaatttt tatgatttta tttaaaaaaa tgagttatga ttatagttta
     2161 tgtaaattgt taggtataga aaataaatgt taaatgtaat tcacgcttta ttttttaggg
     2221 agttaaaaac tagatttggt gctaataggc atttaggtta tctttgggta gttggagaac
     2281 caatgtcaat aacacttgct atcacagcaa ttgtcactat tataagagaa tatcatcatc
     2341 aagttatgcc tgaaggaatt tctattttta tgtttttaat ttcaggtatt atgccttatt
     2401 ttatgtttag aagtatagta actcaactta tgaatggtac tcaggcaaat ttggctcttt
     2461 ttgcttataa acctgtaaag cctatacatg tatttattgc tagaactttg cttgagtttt
     2521 gtatttattt tgtgattttt atcactgtgc ttttttttgt aggatggttt tttagatttg
     2581 atgtattccc agttcattta cttggagttt tattttgtat ttttttactt atgtgttcag
     2641 cttttgcttt gggggtttgt tttgctatta tttggcattt tgtagagcct ttaagaactt
     2701 tattaactta ttttagcata gtgttttatt ggacttcagg tgttatactt cctacttggc
     2761 taactcctcg tcctttactt gatatattat attataatcc tttacttcat atttttgaac
     2821 ttttaagatt taattttttt gagaattatc ctttgcaaga tgaatatagt tatttttatg
     2881 ctatattttg gattttactt gttttattta taggactttt tgtctattac tataacagac
     2941 aagctttaac ggcggtaaaa aaagaatgat aaagctaatt aatctaacta aatcttatcc
     3001 tttatttagc ggtggaagac attatgtttt taaaaatttt acttttgaat ttcctgaaaa
     3061 ttgtagtata ggattgatgg ggggtaatgg tgcaggtaag tccactctca tgagactttt
     3121 aagcggggca gagcttcctg atagtggtaa aataattacc aataaaaaat tatcttggcc
     3181 tttgggttta aatggagctt ttcaaggttc tttaaccgct agggataatg ccaaatttgt
     3241 agctagagta tatggttata aaggacaaga acttcaagaa aaagtaaaat tcgtagaaga
     3301 ttttgcagag ctcgggaaat tttttgatga gcctatgaag acttattctt cgggaatgag
     3361 tgctagaata gcttttggac ttagtatggc ctttgatttt gattattatt tgatcgatga
     3421 agctggagct gttggagatc ctgcttttag ggaaaaaagc gtgaaattat atagggaaag
     3481 attaagcaaa tcaaaagtga ttatggtatc tcataatgta gctgaaatta aagaatggtg
     3541 tgataaaata atttatatga aaaatggaca aattacggtt tatgatgatg tagatgaagg
     3601 aatagctgta tatcaaggaa aagcttaatg gaagaaaata aaactttatt agaaaaaatc
     3661 aaagatttaa gtgtatttga ttcttttaaa attgtttggt ttataatgat ttttgttgtg
     3721 atttattata cattgattgc agcgccaaga tatgtaagca cgatgatttt agatgttaga
     3781 tcaacaagtg gagaaagtgc tcaaacaagt ggaatcttgt ctttgcttag tagtacttct
     3841 acagcaagtg aagatttaaa ttatctaaaa ggttatatag aatcaagtga tatgttaaaa
     3901 attttggatg agaaaattaa acttaaaagt ctttatcaag aacaacatat agatttacct
     3961 tttaaaattt gggattcaag ttcgatagaa tcttatctta aatattacca agcaagagtt
     4021 aaggtgcata cggatgaaac tactaagctt ttgcaggtag aagtagaagg ttttacacct
     4081 aaatcagctc atttgattgc tcaaactatt atgcaagaaa gcgaaaagtt tatcaacgaa
     4141 atctctcata aagcagctag agaacaaatg gcttttgctg aaaatgaagt acaaaaatac
     4201 aaagaacgat atcaaaaagc acaaaatgat ttgattgctt ttcaaaataa atatggggtt
     4261 tttgatccct tgaaacaagc tgaagctaaa gcaagtttgg ttgcgcaaat tgagactaat
     4321 ttagctcaaa aagaagctaa acttttaact ttacaaagct atatgaatga tgcagcacct
     4381 gaagtagtag cacttaaagc agaaattgaa gcgattaaaa aacagctttt aagggaaaaa
     4441 tctaaaattt cagctaacaa ttcttctcaa aagcttaatg atttggctgc taaatttcaa
     4501 gatctaacta tagaagctac ttttgcacaa aaagcttatg aagcagcttt aaaagcttat
     4561 gaaagtgcta gaatagaagc attaagaaaa ataaagcaac ttgtcatcat tcaaagtcca
     4621 gatattccag aaagcgcaaa atatcctgaa agaatttatg atattttaac agcatttatt
     4681 gtattatctt tgatttttgg gattgttaaa tttattaaaa tgataataga ggagcataag
     4741 tattaaaatg aaaaaaatat taattttact ttttagttgt attttatgtt ttggagctgt
     4801 ggatgtttca caaatcattt cagcagagga tcaaggttct actacaacta gcatagatca
     4861 aaatttaagc tcaaattatg atatagcaaa taaagaaaat aatcttacaa aaattcatca
     4921 aattttagta tttggcgctc atctttttaa tggaaatttt aaaaattaca atcaaagagt
     4981 ttataaccca gattataaga tcgcagttgg tgatcaaatc agtcttaaaa tttggggagc
     5041 tgttgagttt tcgcaagttt tagtggtgga ttctcaagga aatattttta tccctaaagt
     5101 aggagctgta aatttactag gtgtgaaaaa tagtgccctt gtaagtgtta taaaagcacg
     5161 tgttaataaa atctataaaa gcaatgtttt tgtttatgca gatatgaatg cttatcaaaa
     5221 tgtcagtgtt tttgtaacag gaagtgttaa tgctccagga ctttatcaag gacttagttc
     5281 ggattcagtg atacagtatc ttgataaagc agggggtata aatttagaat atggaagttt
     5341 tagagatatt caaattttgc gtaataacag cgtgataaaa aatattgatt tatatgattt
     5401 tttactaaag gggcaaatgg atctttttcc ttttagaagc ggagatgtta ttttagtagg
     5461 aaatgttcaa aattacgctt ttgttaacgg tgatgtgcaa agaccttttc gttttgaact
     5521 ttcaaatgat attaaaactt tagctgactt agctagagta tcaggtgcta aacctatcgt
     5581 gactaatgct atcgtaaaaa gttatggtga agatcataaa cttgatgtca gtgcttataa
     5641 taaaatgcaa ttttcaaaag ttttacttag aactggagat gaggtagaat ttcaccctga
     5701 gtatgtttct gaaaatataa ctataagtgt aaatggcgag cataatggtt taaaaacttt
     5761 agttgtgggt aaaggaacga ctttagaaga tatttctaaa ttaattaaag ctaatccaca
     5821 atcaaacatg caagctttac aagtgtttag aaaaagtgta gctagaactc aaaaagaact
     5881 tatcaatgct cagcttaaag agcttgaaac tctagcttta actagtggtt ctgttacagc
     5941 tcaaggtgca gctataagag ctcaacaagc aaaaacgatt ttagaattta tccaaagagc
     6001 taagcaagta gagcctaagg gtcaaattgt cattgataat ccaaagtctt ataattcggt
     6061 tattttagaa gatggtgata ctattaatgt gccaagtaag aataatctca tcatagttca
     6121 aggtgaggtt tctttacctg gagcttttgt gtatgataaa ggaaaagatt taagatatta
     6181 tatcaatctt gcaggaggtt atggagaaag agcggatact tcaaaagttt tggtgatacg
     6241 aagcaatgga aaagctgaaa aatatcatag tggtatagat atgaaaccag gcgattctgt
     6301 gttggtattg ccaaaagtag atagtgagaa tttgcaaatt ttttcaatgt taactcaaat
     6361 tctttatcaa attgctattg caaccaatgt tgtgcttaat ctttaaggtt taaaaatgaa
     6421 tactcttgaa atagccaaag aagtctttga aaaagaagca caagctattt tggatttggc
     6481 taaaaattta gatgaaaatt ttaatcaagc tgtgaatttg atgctaaata ccaaagggcg
     6541 ttgcatagtc agtggaatgg gtaaatcggg tcatataggt gctaagatag cagctacttt
     6601 agcaagtaca ggaacgccaa gctttttcat ccatccagga gaggctttgc atggagatct
     6661 tggaatgtta actcctgaag atgttttaat tgctatttca aattcaggag aaactgaaga
     6721 aattttaaaa atcattccag ctataaaaaa gcgtaaaatt ccacttatag taatgtgtgg
     6781 taaaaaaaat tctacccttg taaagcaagg cgatatattt ttaaatatag ctgtggaaaa
     6841 ggaagcttgt cctttgcagc ttgctcctat gtcttcaaca acggcaactt tggttatggg
     6901 agatgcttta gcagctgctt tgatgaaagc aagaaatttc aagcctgatg attttgcact
     6961 ttttcaccca gggggaagtt tgggacgtaa gcttttaact aaagtaaaag atcttatggt
     7021 ttcaagcaat cttcctatag tgcatcctga tactgaattt aatgatcttg ttgatgtgat
     7081 gactagtgga aagctagggc tttgtgtggt gcttgaaaat gaaaaattgg ttggtatcat
     7141 cactgatgga gatttgcgtc gtgctttaaa ggcaagagat aagctaagat ttgattttaa
     7201 agctaaagaa atcatgagca ctaatcctaa agtagtcgat gctgatgcta tggcaggtga
     7261 agcagaagaa atcatgctaa aatataaaat taaagaaatt atagtaggga aagaagaaaa
     7321 agttgtaggt attatccagc tttatgctat aggaaatgtt taatggctct tttatctgtt
     7381 attatccctt ttggtttaag taaagaacgt ccctatatag aagaaagggt tcttcagaaa
     7441 gctaaatctt ttcaaagtga tgagaatata gaatttattt ttgttgaagg atattcatct
     7501 aaagatcatg agcttaaaaa ttttatccaa acaaatcatc atatttatct taaagatatg
     7561 aatcaaaaag ctttttctca aggaagatgt aggaatttag gagcaagtta tgcgcattca
     7621 aatgttcttt tatttttgga tgtggattgt tatatttctt tagataattt tgaaaaaatt
     7681 ttaaaactag ttcaaattaa aaatatttct caaaatatca atgctttggt agt
//
LOCUS       DARBAC010000079         7704 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.079, whole genome shotgun sequence.
ACCESSION   DARBAC010000079 DARBAC010000000
VERSION     DARBAC010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7704
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.079"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            83..803
                     /locus_tag="SB799_001303"
                     /pseudo
     CDS             83..803
                     /locus_tag="SB799_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            733..2661
                     /locus_tag="SB799_001304"
     CDS             733..2661
                     /locus_tag="SB799_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868539.1"
                     /translation="MGVENIYTLPLNGVPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDKRITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNISKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLNKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGGFATEGANFNVIDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNIL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINAKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCYSAAVESSCIIKADKES
                     AFNKIIINNTAFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNRLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPANGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNRLLNQQELENLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
     gene            2673..5822
                     /locus_tag="SB799_001305"
     CDS             2673..5822
                     /locus_tag="SB799_001305"
                     /inference="COORDINATES: protein motif:HMM:NF017658.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016818271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEG0868540.1"
                     /translation="MKKMSKHIVLSFAVSSLLFSQAYALPQGGKFTHGTSGTIHTSGN
                     TVTITGKGQNHVIQWGGGFNIGQNESVNFNGKNQNYLNIAYQKDASKIDGALNGGNNN
                     IFLVNPMGVLIGKTGTITAGKFVASTTPLSDDNVKTFLEKGAGFSPAFDVSKQGNIIN
                     LGKINADNIVLIGNKVEIGVGAELAGQDGQTNAKTAHLIGNYVYVSVGKDKENKNTIK
                     IDKDGFKGTAIVEGFMQRDMTSFANDKYQFGDFGTILKSSCNGKESQNFYKAITIGGW
                     ENDKNIQEWILFSNGWNKDELNGIFKDDLTTVRLVSDIDFGYKNAVDPVGASKYAFSG
                     IFDGGNYTLKNILINAQNTDKGWNTGIFGKVEGKDGNNKAKIYNLNVDGLKFSGKTNS
                     GGAFVGQSSNADFSNIHLKNIGDLIFFDPNSKNETSGFLYGGGFVGYAKSGSSFNRIS
                     LDNFSKIALQPEGKFSSAYIDIYLGGFAGYSEGSNFSNILLNNIGGVTILGSETGGNI
                     FAGGFVGYAGDKSYFSQIDLKNIGSVQADGKTFVKHAGAGGFAGAINGTNSFEKISLI
                     NFGDIIAKRGYVWVVNGNFKVGSGGFIGLLNPLDDKILYVDFKNILLNFDQKMQIYAK
                     AGDGASSYFPDLNNWEYNFSGGFFGGLFTSKVGRANFNNIQLKFGQDVSIIAQKFRSN
                     SNEKYQGLFYGYSVKNWNDGIMKTDNVAIYYEKNYNTNQYNWYYQDIKDGFFGSAIND
                     YAYKDGRSYEFYDYNVMKDMEINKQIIAILEKDGVVSKDYNNGYVSYYDGNAKITPEV
                     PDFKDPVLSQNDFDPKLLQRILDDLMNGKYTYDFDTKTWTYTDSKGVVGKDEASEITQ
                     SLNFLNAFKDTGVEQEFINLWKNSQDQNYKNYANLYEKWTQKKTAMDKIKTGEGYFAS
                     FKEELQKYQEALAQLDKENKNYEKIKESGLVSDETLKVMYEKLLEQKEALEKQFADLS
                     GNEGFHYKLENEILNSQGFAINGSDVDGKAYIGNFNFKGKLASLPEKPNISIYEPDKQ
                     GGEDPANLLYCRLKFLKRL"
     gene            5792..5977
                     /locus_tag="SB799_001306"
     CDS             5792..5977
                     /locus_tag="SB799_001306"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868541.1"
                     /translation="MPPEIPEKVVEAPIKIQTEVDAKKEEDDDQVEIGEADARSSGLR
                     CIVSDNFKTMNICVNAK"
     gene            5987..7675
                     /locus_tag="SB799_001307"
     CDS             5987..7675
                     /locus_tag="SB799_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002893445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEG0868542.1"
                     /translation="MRKILVVLVLLQVFSHAEELNNNKIRELIESSPEANEPQNKNLK
                     NTLKNQKSPVNFKEQNTTNITNSQTDQNEAKVFVREYVLHIDNKDLTFKKLRISEKEI
                     QDAIAEYRNQELSLQNLKDITNIIAYYCQVSGYPSATAYIPPQDLSSNKVQINIAFGT
                     LGKVIIKNNSGVRDYALESKLNKNLKGKVITTKNVENEIYKINEIYGIQTNANLQSGD
                     GYGESDVIIEVNKGDSATLTLYSNNYGTKETGRFRAGMSQSLNNIARQGDNLNFYLQD
                     SDENQIDYGINYSTFIGNLKITPFATQGHYVLGGIYRNLGFYGDSMNVGVNFSYPVFL
                     YTEYSLYLVSGFTHKKIKDYYLDGLVSNEKASNSVNLGIEGTYKGLENNVLSYTLNFT
                     YGNVENDGDSSGFNGVNLGNFGKMNLNLSNEYQFQERLTHIFQLNYQKVIGGAVLDSS
                     ESVSLGGPYGVRAYLEGEGSADNVVSGTLGIRFQTPLEGLYLTPFYDIGYSWYENKEY
                     QSENHYFMDAMGMQILYTRSANFYVKMDAARAVHRFKHDGEHRARVYVSLGKYF"
BASE COUNT         2918 a          896 c         1394 g         2496 t
ORIGIN      
        1 atcaactcag gacatacgag atagtgttgc aaataatcaa tttgcgataa atcaaaagga
       61 ttttatttta gtgagaaatg agatgaaaaa atattttaat atttttaaaa tttttacaaa
      121 taagacaaat gcaaaatttg gcttgggcgt ttgtagtgtg gttttatctt cttcggtttg
      181 ttttgcggcg gttcaggcta caagcaagga tggaaaaatt ttttatattt ctgaacattc
      241 ttttaaggat aatcaagttt atgattttca agcagaaatt tttaaaaaaa attaatggaa
      301 aaaatttcta tgcttctaag tcaaaatatc ctatattaaa tttaactatg atttataata
      361 accctaaatc tggaaataaa aatttatgca agcttgaaat tttaactccg gatacttcaa
      421 aagaagagat cataacagct tttagcactt taggaaccgt atcttcagat actcaagccg
      481 ttcctagttc ttttatgcct tttattgtaa cagcttatgc tcaaaataca aatgcaacaa
      541 ataataaact tatattagaa aatggagaat tatcttctgt gtatttttgc aaaccaagca
      601 taggggattg tggagtacct aataattctc aaaaaggcga tcgttttaag tatttaatta
      661 ctgcggcgtt tactgacagg ggggggggat ttaacaatca aaccatttta aaagaaaact
      721 cctatatcaa taatgggtgt agaaaatatc tacaccttgc ccttaaatgg agttccttat
      781 atttcaggat ctgtagcttt tgatggtgaa gctaaagaca ataaattaat cttagagtca
      841 aatacaaaaa ttgaccttca taattcccag tatttttcag atgaagaagg taaggatatt
      901 tatgataaaa gaattactcg tttaatggga gcttttggta taaattctaa tttacaaaac
      961 aataaagttc ttatcgattc agccaatatc gtccttcatg ggccagatgg tgagtataca
     1021 gctcgttcga cctttgaaat tttgggtgct ttagctgatg taaataatct taaaaaatac
     1081 aatataagta aaaattctgt aataattaaa aatttaaatt tagatttaat ggtaaattcg
     1141 caaaataaaa taacttttta tgatgctgtt ttatttggag aaatttacgg tggaagaaca
     1201 ttacagggta atgcagagaa aaattctata gaagtttatc attttaactc attagatcat
     1261 cttaataaaa acattaaaac acatgcatcg ttaaacctct atggtgggta ttctaacgat
     1321 ggtgaagcta atggaaataa aattgtattt cgccttaaaa aacctttaaa aatcagtgat
     1381 aatttttatg gaaaaaatta ttacaatctt tacggaggtt ttgctacaga gggtgcgaat
     1441 tttaatgtta ttgatataca aaatgattta acctatgaaa aagttccaca aaattattct
     1501 gataaattta ctgtatatgc ggcaagaact ttaagcggaa aagcaaataa taatatctta
     1561 agtataaaag attctgttat ttcattgcct ttatatgctt ttattacaag tgaaactacg
     1621 ctagatggta tagactatat cgccgatgaa tcaaacaata atgaagtaaa ttttgaaaat
     1681 attaaatcat ctaaaaattt aagtttgatg atcaatgcta aaaatgtttc aaataataaa
     1741 ataaattata atctcattca gagtttaacc gaagcgagtt ctttaggaaa gggctcaaaa
     1801 attattttaa aagcaactca aaatgcaaat aacaacctta taaagcttaa agattgttat
     1861 tcggctgccg tggaaagttc gtgcatcata aaagcagata aagaaagtgc ttttaataaa
     1921 attatcatca acaacacagc ttttagtact gcctcggata aaagacaagg ttatgtgggg
     1981 ttgatagctg gagtgtctgc aaattctcat gataatatca tggaacttgt taatttaaat
     2041 atagatgagt ataaaaatca agatgctata tttttagctc catctggaac ttcggatatt
     2101 tcaaatttta aatcttataa caatacttta tatttaggtg gagagttaaa tttctttaaa
     2161 gatgtaaata tcgatttgct ttctggttct gtttttcatg aagtaaataa aaaaggcaaa
     2221 ataatcactc aaattctacc gcatcaagaa gatttttcta aaaacaatcg tttgattata
     2281 gatactcaag atgttaaatc agaagtggta aataactttg aaaattttac ttttattttg
     2341 ccaaataaaa taaaaaatcc tatcttaact atagaaaaac ttatcaatct tcctgcaaat
     2401 ggaagtatgg aaattcttac taaaaataaa ccaacaaaag gaaaatatat tctcatacaa
     2461 agtgatgttg gaatttatga tggtgacaat agattgttaa atcaacaaga attagaaaat
     2521 ttgttagaaa aaatgaaaaa taataaaaat aaatttaatt ataacaagat agaaaagttg
     2581 gctaaaagta cattgaaaaa tgtaaatttt agctttgaag tttcagatga tgcaaaaata
     2641 atttatatca acatacttta aaggagagta acatgaaaaa gatgagtaaa catatagttt
     2701 tatcatttgc ggtgagttct ttactctttt ctcaagctta tgctttacca caaggaggta
     2761 aatttactca tggtacaagt gggactatcc atacctctgg aaatactgta acgattacag
     2821 gaaaaggaca aaatcatgtt atccaatggg gtggtggttt taatatagga caaaatgaaa
     2881 gtgtaaattt taacggcaaa aatcaaaact acctaaacat tgcttatcaa aaagatgctt
     2941 ctaagataga cggagcttta aatggtggga ataacaatat ctttttggtt aatcctatgg
     3001 gagttttgat tggcaaaaca ggaactatca ctgcgggaaa atttgtagct agtacgacgc
     3061 ctttaagtga tgataatgtc aaaacttttt tagagaaagg agctggtttt tctccagcat
     3121 ttgatgtaag taagcaagga aatattatca atcttggaaa gattaatgca gataatattg
     3181 ttttaatagg aaataaggtt gaaataggag taggagcgga gctagcgggg caagatgggc
     3241 aaactaatgc taaaacagct catttaatag gaaattatgt ttatgttagt gtaggaaaag
     3301 ataaagagaa taaaaatact attaaaattg ataaagatgg cttcaaaggc acggctattg
     3361 ttgagggatt tatgcaaagg gatatgacaa gttttgcaaa tgataaatat caatttggag
     3421 attttggtac tattttaaag tcttcttgca atggaaaaga gagtcaaaat ttttataaag
     3481 ccatcactat tggtggttgg gaaaatgata aaaatattca agaatggatt ttattttcaa
     3541 atggttggaa taaagatgaa ttaaatggaa tttttaaaga tgatttaaca actgtaagat
     3601 tagttagcga tatagatttt ggatataaaa atgcagtaga tcctgtgggt gcaagtaaat
     3661 atgcctttag tggaattttt gatggtggaa attatacttt aaaaaatata cttatcaatg
     3721 ctcaaaacac agacaaagga tggaatactg gtatttttgg taaagttgaa ggaaaagatg
     3781 gtaacaataa ggctaaaatt tataatctta atgtcgatgg tttaaaattt agcggaaaaa
     3841 caaattctgg aggagctttt gttgggcaaa gctctaacgc agattttagc aatattcatt
     3901 taaaaaatat tggagattta attttctttg atccaaattc taaaaatgaa accagtggat
     3961 ttctttatgg tggtggtttt gtaggttatg ctaaaagcgg ttctagtttt aatcgtatta
     4021 gtttagataa tttttctaaa atcgcactac agccagaggg taaatttagc agtgcgtata
     4081 ttgatattta cttaggtggt tttgctggct attcagaagg tagtaatttt tctaatattt
     4141 tattaaacaa tattggcgga gtaacgattt taggttcgga aacaggtggt aatatttttg
     4201 caggtggttt tgtaggttat gctggagata aatcatattt ttctcaaatt gatttaaaaa
     4261 atataggtag tgttcaagca gatggtaaaa cttttgtcaa gcatgctggc gcaggaggtt
     4321 ttgctggagc tataaatgga actaattctt ttgaaaaaat ttctttaata aattttggag
     4381 atattattgc gaaaagagga tatgtttggg ttgttaacgg taactttaaa gtaggttccg
     4441 gcggttttat aggactttta aatcctttag atgataaaat tttatatgtc gattttaaaa
     4501 atatattatt aaactttgat caaaaaatgc aaatttacgc taaagctgga gatggagctt
     4561 cgagctattt tccagattta aataactggg agtataattt ttctggtgga ttttttgggg
     4621 gattgtttac atcaaaagtt gggagagcaa attttaataa tattcaactt aaatttggac
     4681 aagatgtaag tattattgct caaaagtttc gttcaaattc taatgaaaaa tatcaaggtt
     4741 tattctatgg gtactctgtg aaaaattgga atgatggaat tatgaaaacg gataatgttg
     4801 ctatctatta tgaaaaaaat tataacacta atcaatataa ttggtattat caagatatca
     4861 aagatggctt ttttgggagt gctataaatg attatgctta caaagatggc agatcatatg
     4921 aattttatga ttataatgtg atgaaagata tggagataaa taaacaaatt atagctattc
     4981 ttgaaaaaga tggagtggtt agtaaggatt ataacaatgg atatgtttct tattatgatg
     5041 gtaatgcaaa aattactcca gaagtgcctg attttaaaga tcccgtttta tctcaaaatg
     5101 actttgaccc taaattgctt caaagaattt tagatgattt gatgaatgga aaatacactt
     5161 atgattttga taccaaaact tggacttaca cagatagtaa gggtgtggta ggaaaagatg
     5221 aggctagtga gatcactcaa agtttaaatt tcttaaatgc gtttaaagat actggagtag
     5281 aacaagaatt tataaatttg tggaaaaatt ctcaagatca aaattataaa aattacgcca
     5341 atctttatga aaaatggacg caaaagaaaa ctgctatgga taaaatcaaa accggcgaag
     5401 gttatttcgc tagttttaaa gaagaattac aaaaatacca agaagcctta gctcaacttg
     5461 acaaagaaaa taaaaactat gaaaaaatca aagaatcagg cttagttagc gatgaaacac
     5521 ttaaagttat gtatgaaaaa cttttagaac aaaaagaagc tcttgaaaag cagtttgcgg
     5581 atcttagtgg aaatgaagga tttcactata agcttgaaaa tgaaatttta aattctcaag
     5641 gttttgctat aaatggaagt gatgtagatg gtaaagcata cattggaaat tttaatttta
     5701 aaggaaaatt agcttcattg ccagaaaaac caaatatatc tatctatgag ccagataaac
     5761 aagggggtga agatccagca aaccttctgt attgccgcct gaaattcctg aaaaggttgt
     5821 agaagctcct ataaaaattc aaaccgaagt agacgcaaaa aaagaagaag atgatgatca
     5881 agtagaaata ggagaagcag atgctagaag tagtggtttg cgttgtattg taagtgataa
     5941 ttttaagaca atgaatattt gtgtaaatgc aaaataggaa ataaaaatga gaaaaatttt
     6001 agttgtttta gtcttattgc aagtattttc acatgctgaa gagttaaata ataataaaat
     6061 aagagagctt atagaaagct ctcctgaagc aaatgaacca caaaataaaa atttaaaaaa
     6121 tacattaaaa aatcaaaaaa gccctgtaaa ttttaaagag caaaatacta caaatattac
     6181 aaattcacaa actgatcaaa atgaagctaa ggtttttgta agagagtatg ttttgcatat
     6241 cgataataaa gatttgacat ttaaaaaatt aagaattagc gaaaaagaaa ttcaagatgc
     6301 aatagctgaa tatcgcaacc aagagttaag cttacaaaat ttaaaagata taacaaacat
     6361 tatagcttat tattgtcaag taagtggcta tccttcggca actgcttata taccaccaca
     6421 agatttaagt tctaacaaag tgcaaattaa catagctttt ggaactttag gaaaagtaat
     6481 cattaaaaac aactcaggtg tgagggatta tgctttagag agtaaattga acaaaaatct
     6541 taaagggaaa gttatcacaa ctaaaaatgt ggaaaatgaa atttacaaaa tcaatgaaat
     6601 atacggaatc caaaccaatg ctaatttaca atcaggtgat ggttatggag aaagcgatgt
     6661 tattatagaa gtaaacaaag gtgatagtgc aactttaact ttatattcta acaactatgg
     6721 gaccaaagaa acaggtcgtt ttagagcagg aatgagtcaa agtttaaaca atatagcaag
     6781 acaaggggat aacttaaatt tttatcttca agatagcgat gaaaatcaaa tagattatgg
     6841 gattaattat agtactttta taggaaattt aaaaattact ccatttgcaa ctcaaggaca
     6901 ttatgttctt ggtggaattt atagaaatct tggtttttat ggggactcta tgaatgttgg
     6961 agtaaatttt tcttatcctg tgtttttata taccgagtat tctttatatc ttgtttcggg
     7021 ttttactcat aaaaagatta aagattatta tcttgatggt ttagtaagta atgaaaaagc
     7081 gagcaatagt gtaaatttag gcatagaagg aacttataaa ggtttggaga ataatgtcct
     7141 aagttatacc ttaaatttta catatggcaa tgttgaaaac gatggtgatt cttctggatt
     7201 taatggagta aatttaggga attttggaaa aatgaattta aatttaagca acgaatatca
     7261 attccaagaa cgcttaactc acatttttca actcaattat caaaaagtta tcggtggtgc
     7321 tgttttagat agtagtgaat ccgtgtcttt aggtggacct tatggtgtgc gtgcttattt
     7381 agaaggcgag gggagtgcgg ataatgttgt ttctggcacc ttaggaataa gatttcaaac
     7441 acctttagaa gggctttact tgactccttt ttatgatata ggatattctt ggtatgaaaa
     7501 taaagaatat caaagcgaaa atcattattt tatggatgca atgggtatgc aaatactcta
     7561 tacaagaagt gctaattttt atgtaaaaat ggatgctgca agagctgttc atcggtttaa
     7621 acacgatgga gaacatcgag caagagttta tgtaagccta ggaaaatact tttaactttg
     7681 gggtgattgg agaaatttct accc
//
LOCUS       DARBAC010000080         7701 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.080, whole genome shotgun sequence.
ACCESSION   DARBAC010000080 DARBAC010000000
VERSION     DARBAC010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7701
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.080"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..607
                     /locus_tag="SB799_001308"
     CDS             <1..607
                     /locus_tag="SB799_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEG0868543.1"
                     /translation="IFHSNDFFKMEIKNEDSFSLAIKQFTQTNPTNETKPTESIIEPI
                     KPKPQPKVIKKTPEKIQKKIKKTPPHPIPNKTPIAPTQEVKTFTKTTDTNVKPKITQL
                     TQGKDNHPVLKEIQKAIQQAQFYPRQAKKMRMQGTVKVEFLWKENKTLADLKIIESSG
                     YDLLDKSALESIRKASLNFPQYNGDLRITLPIIYDFKTLRG"
     gene            complement(620..1489)
                     /locus_tag="SB799_001309"
     CDS             complement(620..1489)
                     /locus_tag="SB799_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868544.1"
                     /translation="MKIDTSASLTHSLTNNVDKKELSVLKKEDQDKIPVQDLSSLNSD
                     GVKIVFENKQGELIALNLSDENYSSLQKNFGSYTNYVARNDGSIRLNGEANQFVSNWF
                     ESVKDNFGSLNSNLNNKQQSVKLNFNTSTLQQSMQNLGFKTSDEKISDDANIEEKLNF
                     FIDKDVNKDGKVDDSDVKEPSMREILSDIKEASGGGANAMKTIDPQKINKKDDKENNI
                     KEKEDEDLLQKAQEKGLSALSADEQAKLEASNPEEFEKLKQKSLQELSQNLSKDFQNK
                     IENQEAQIVDKRV"
     gene            complement(1493..1654)
                     /locus_tag="SB799_001310"
     CDS             complement(1493..1654)
                     /locus_tag="SB799_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868545.1"
                     /translation="MLKIILVLSILSSFAFANSCANYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            1749..2732
                     /locus_tag="SB799_001311"
     CDS             1749..2732
                     /locus_tag="SB799_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HEG0868546.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMIGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGISGRSRKRQLELAAKFGLEDFESPGGGCLLTLDNFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEVIELGDLIGAYSLVDEK
                     ISEKDLELALKIALTYTKHEVGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(2819..3907)
                     /gene="aroC"
                     /locus_tag="SB799_001312"
     CDS             complement(2819..3907)
                     /gene="aroC"
                     /locus_tag="SB799_001312"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEG0868547.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV
                     SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLVGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCHNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLEFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(3907..4581)
                     /locus_tag="SB799_001313"
     CDS             complement(3907..4581)
                     /locus_tag="SB799_001313"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEG0868548.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIFMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(4568..5008)
                     /gene="rnhA"
                     /locus_tag="SB799_001314"
     CDS             complement(4568..5008)
                     /gene="rnhA"
                     /locus_tag="SB799_001314"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEG0868549.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(4995..5981)
                     /locus_tag="SB799_001315"
     CDS             complement(4995..5981)
                     /locus_tag="SB799_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868550.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFANKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKEHDFIKALELCTFNITDEEKKKKLLEFKIEDNPMLGRLVFEKYH
                     MFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKISKHDDTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNTCKIIYEVKNNETH"
     gene            6051..>7701
                     /locus_tag="SB799_001316"
     CDS             6051..>7701
                     /locus_tag="SB799_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEG0868551.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPTKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAQKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHDILDEGIELGEFYIRRLISTHSIISALDKQKALETIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICKVNLAFLNNVKIKNSTLALKKQLFTLIDKNLNLLIKNLNT"
BASE COUNT         2780 a         1347 c          975 g         2599 t
ORIGIN      
        1 catttttcac tcaaatgact tttttaaaat ggaaattaaa aatgaagatt ctttttcttt
       61 agcaataaaa caatttaccc aaactaatcc aacaaatgag actaaaccaa cagaatccat
      121 tatagaaccc atcaaaccaa aacctcagcc aaaagttatt aaaaaaactc ctgaaaaaat
      181 tcaaaaaaag ataaaaaaaa cacctccaca cccaatacca aataaaaccc caatagcacc
      241 aactcaagaa gttaaaactt ttacaaaaac aactgataca aatgtcaaac ctaaaatcac
      301 ccaattaaca caaggaaaag ataatcaccc tgtattaaaa gaaattcaaa aagctataca
      361 acaagcacaa ttttatccaa ggcaagcaaa aaaaatgcgt atgcaaggaa ctgtaaaagt
      421 agaattttta tggaaagaaa acaaaacttt agcagattta aaaatcatcg aaagctcagg
      481 atatgatttg ttagataaaa gtgctttaga aagcataaga aaagcttctt taaattttcc
      541 acagtataac ggagatttaa gaattacact acctattata tatgatttta aaaccctaag
      601 agggtaaaat tataatttgc tacactctct tatctacaat ttgcgcttct tgattttcaa
      661 ttttattttg aaaatcttta cttaaattct gacttaattc ttgcaaagat ttttgcttca
      721 gtttttcaaa ttcttcagga ttgctagcct caagctttgc ctgctcatca gcacttaaag
      781 cacttaaacc tttttcttga gctttttgaa gcaaatcttc gtcttctttt tctttgatat
      841 tattttcctt atcatctttt ttattgattt tttgcggatc tatagttttc atagcattag
      901 ctccaccacc tgatgcttct ttaatgtcgc ttaaaatttc tctcatgcta ggttctttaa
      961 catcactatc atcaacttta ccatctttat ttacatcttt atcaataaaa aaatttaatt
     1021 tttcttctat atttgcatca tcagatattt tttcatcgct tgttttaaag cctaaatttt
     1081 gcatactttg ctgaagagta cttgtattaa aatttaattt tacactttgt tgtttattat
     1141 ttaaatttga atttaaagaa ccaaaattat cttttacact ttcaaaccaa tttgaaacaa
     1201 attggtttgc ttcgccatta agccttatac taccatcatt tctagcaaca taattcgtat
     1261 aagaaccgaa atttttttgt aaactactat aattttcatc gcttaaattt aaagctataa
     1321 gttcaccttg cttattttca aaaacaatct taacaccatc gctatttaaa ctcgaaagat
     1381 cttgcacggg aattttatct tgatcttctt tttttaatac gctaagctct tttttatcaa
     1441 cattattagt taaagaatga gttaaactag cagaagtatc gattttcatt atttatcctt
     1501 ttttacattt tgcaaataaa cctaaacgac acatttttct ctcatgtgaa ttttttaaag
     1561 aattacactt tttaagttct tgctcgtagt tagcacaaga atttgcaaaa gcaaaagaac
     1621 tcaaaatgct taaaaccaaa attattttta acactttcca atccttattt taaagatttt
     1681 ttagttaaaa ttataccttt tataatcgac aaaatcttaa aaaactttat aatctcagaa
     1741 aggaatcaat gaaagcatta gctcttttta gcggtgggct tgatagtatg cttgcaatga
     1801 aactcatcac tgcacaaggc atagaagtta aagctctaaa tatcaacata ggttttggaa
     1861 gcacaagtga taaaagcgaa atcatgaaaa agcgtgcggc aatgataggt gcagattttg
     1921 aaatgataga tgtaagaaat tcctatcttc aagaagtgct ttttaatcca caatatggct
     1981 atggcaaaca ttttaatcct tgtatagatt gtcatgcttt tatgtttaaa actgctttgg
     2041 ctatgttaaa agaagaaaac gcaagtttta tcatcacagg agaagtttta ggacaacgcc
     2101 ctatgagtca aagaagtgat gcgatggcaa aggttaaaaa acttgctctt gatgaagaag
     2161 atttaatctt gcgtcctatg tgtgcaaaaa acctacctct aaccaaacct gaaagagaag
     2221 gttgggtaga tagagaaaaa ctcgaaggta ttagtggaag aagtcgtaaa agacaacttg
     2281 aacttgcagc taaatttggc ttagaagact ttgaaagccc aggtggaggt tgtttgctaa
     2341 ctcttgataa ttttgctaaa aaaattcgag atttcataga atttgacaaa gatatgcagg
     2401 ttaatgacgc acaactttta aaatatggtc gtcatttaag attacctaat ggagctaaaa
     2461 tgatcatagg tagaaatgaa cttgaaaata ctcttttaaa aggtttaaaa actcctaaat
     2521 atgaagtcat agaacttggg gatttaatcg gagcttactc tttggtagat gaaaaaattt
     2581 cagaaaaaga cttagaactt gccttaaaaa tagcccttac ctatactaaa cacgaagtag
     2641 gaaaaagcta tgaacttaaa tttaaaaatc aagcttatac aagtatagct tttgaaaata
     2701 aggctgatat taatcaattt tttattagtt aaagtataaa gtatttagca aaacaagcga
     2761 tatagtattt gaatcttttc aaaatattgc aatcaagccc atgaaaatgg gctttttttt
     2821 attttaatcc ataagcattt tttaaattgt ttaaattcgc actcgcattc aaaagcaaac
     2881 aatcagccaa aactaaacgc accatagcac tagctacaac acttcctcta acacctacac
     2941 aaggatcatg cctacctttg agttcaaatt ccaaattatt gccaaattta tctatacttt
     3001 cttgcttggc aaaaatagaa ggagtaggtt taaaataagt ttttaaaata agattttctc
     3061 catttgaaat tcctcctaaa attcctccac tatgattgct taaaaacttg ccatctttta
     3121 aagcatcatt atgacacgat ccgcgcattt tgcttgcatt aataccttcg cctatttcaa
     3181 ctgctttaac agcattaatt cccattaaag catgagctaa tttagagtct aacttatcat
     3241 aaagaacttc tccaagtccc acaagcatac cactaacttt tgtaaaaaca gcagcgccta
     3301 cactatcttt tgaatttcta gcatttaaaa tttcattttt aaagtcactt tctagttttg
     3361 gatcaaggca aaaaatttca cttttcttag caaattcaaa atcaaattct tcttctttca
     3421 aatttgatac aaaagttcct actccaaaaa caccactttg aacacaaata tcaaattcac
     3481 gcaaaagcat cgctgcaact gcaccaccag ccactctagc aacactttcc ctagcgcttg
     3541 atctaccccc acccctatga tctcttatgc catatttata aaaataagta aaatccgcat
     3601 gagcaggacg aaatagatct tttaaattat cataatcctt agaatgagca ttttcattaa
     3661 aaaccactat agctatggga tgacccgttg tatatccttc aaaaaccccg cttaaaacct
     3721 gagctttatc gctttctttt cttggtgttg caaatttact tccgcctttg cgtttatcaa
     3781 gctcattttg taaaaattct tcatcaaatt taactccagc aggcattcca tcaataatac
     3841 atccaacagc cacaccatga gactcaccaa aacttgtaaa tttcaatctc gtaccaaagg
     3901 tattcactat aaagctccta atttctcaag tgcaattttt gctgccattt gctgtgcttc
     3961 ttttttgctt cccgcaatag ctcttgcaag ttctttacca tcaagcatta aagcgatttc
     4021 aaattgcttt aaatgatcag gaccaaaagc acgcactgtt tcatactgcg gagtttgtcc
     4081 gatttttccc tgtgtaatct cttgtaattt tgttttataa tcttttataa gaatttttgc
     4141 atcaatttga gggaaatttt tttctataag ccttaaagca atagtttttg caaactcaaa
     4201 cccagcttct aaatgtatag cacctataat ggcttctaac gcatctgaaa gtatagaagg
     4261 cttttctttt cctccattgt tttcctcagc aacactcata aaaataaaat cgcccaaatt
     4321 taaactattt gcaatttttg caaaagactt ttcattcact aaagccgctc taagcttaga
     4381 taaatctcct tcggcatctt tagcgaattt atgaaaaagg tattcaccca caactaaatc
     4441 aagcacagca tcacctaaaa attccaagcg ttcgttgttg taagattttt taaaactttt
     4501 atgggttaaa gcatgtatga gaagattttt atctttaaat tcataagtta aactctgctc
     4561 tagtttttca atgtttttca tcattttccc ttgcaatttt caaagcagct tcacgcgcca
     4621 atgtatcaca cctttcattt tccaaatgtc cattatgtgc ttttacccaa aaagccttaa
     4681 tcttatgaga ttttgccact ttaatatatt ccttccataa atctatattt tttttacctt
     4741 taaaatcctt ttttatccat ccttctagcc attcattaat actttgaacc attaggttag
     4801 aatctgtaaa aagcgaaatt tcacaaggct cttttaaagc cttcaaagat tcaataattg
     4861 ccattagctc cattctattg ttagtggtat tagcctcagc tccaaaacct tccttttgat
     4921 actccttata acgcaaaata taagcccatc cgccaaaacc tggattatta agacatgaac
     4981 catctgtata aatttcaatg tgtttcattg tttttcactt cataaataat tttacaagta
     5041 ttaaactcat aacaaacagg acagtgataa aaaaacaaag gcataacatt tttacactca
     5101 gaacaacggt atgaaaattc taaccccgca ttaaaagaat tatcttttaa aatttttaac
     5161 attttaaaat tagaattttt aaaaacaaac tgatgcgtat catcatgctt tgaaatttta
     5221 cccaaagcat aaaagaattc taaaaaatct tgattttcta aattaaacgc ttcattttcc
     5281 ctataaagca aatcacaaat atcaaaaaaa ttttgcccta aaaacatatg atatttttca
     5341 aaaactaaac gccccaacat aggattatct tctattttaa attctaaaag ttttttcttt
     5401 ttttcttcat cagtgatatt aaaagtacaa agttctaaag ctttgataaa atcatgctct
     5461 ttttgcacat cttcattaag ctcaaaaaga cattctaaaa gttctaaatt ttctttataa
     5521 gaacgaagtt ttaaataaac aatttttaaa agttttaaag cttgtatatt tcttggacgc
     5581 agttttaaag cttgtaataa aacttctttt gcacgctcta aaaatcctgc tttaaaataa
     5641 acttttgcca aagaaaggaa aataaattct ctttcttgtt tatctttaca tttttcaaga
     5701 gcaattaaat aaatttgagt tgctttttca aattccccac ttttagtaaa aatttcggcc
     5761 aaaaaactta aatttccaaa actcaagcta ctatttctta acaactcttt atgagcgtta
     5821 tccatttcaa atttttttat aaatttttca agcttttgtt cttcatcttt gttagcaaat
     5881 attttccaaa tataatttgc aacagctaca acaaatacta aaattgttaa aattataagc
     5941 cctactaaag ggtctctgta ttctacaaag aaaaaatcca tagtctcgct ctaaaaattt
     6001 tatgccaaat tatagccaaa tctttgtata attttaacaa ggtttgtaaa atgataacta
     6061 aagaaagtat agaaaattta tcccaaagac ttaatattgt tgatattata gaaaattata
     6121 ttgaagtaaa aaaacaaggc tctagttttg tgtgtatctg cccttttcat gcagataaaa
     6181 acccgtctat gcatatcaat cctaccaaag gtttttatca ttgttttgcc tgcaaggctg
     6241 gtggagatgc ttttaaattt gtaatggatt atgaaaaatt aagttttgcc gatgcagttg
     6301 aaaaagttgc aagccttagt aattttactt tgagttatac aaaagaaaaa caagaaaata
     6361 aaaaagagct aaagtctata ctaccaagct taaatgcgta ttttaaagat aatctcaaac
     6421 accacaaaga agtcttaacc tatctttacc aaagagcttt aaatgacaaa gatatagcca
     6481 aattcgaatt aggttttgcg ggagcaagtg aagatagtat aagattattg caaaatcaaa
     6541 aaattccttt agaagatgct atgagtgttg gagctttaaa aaaagatgaa aataatgaat
     6601 tttacgcaag ttttatatgg cgtatcacct ttccaatcta cgatcataaa gacttattag
     6661 tagggtttgg agggcgtact ttaaatccca atgtaccggc aaagtatgta aattcacccc
     6721 aaaatatact ttttgataaa agtagaattt tttatgcttt taacatcgct aaagaaaata
     6781 tagcccaaaa aaaagaaata atagtatgtg aaggctacat ggatgcaata gcttttcaca
     6841 aagcagggtt taataatgct gtagcagttc ttggaacagc attaaccgaa catcatctac
     6901 ccttaatccg ccgttatgat gcaaaagtga ttttatgttt tgacaatgat gaagcaggat
     6961 taaaagctgc gacacgatct gcatttttat taagcacaaa caaaatagac ggtaaagtgg
     7021 caattttgca aggtggaaaa gatcctgctg agctcgtagc aaaaaatgaa agcacaaaac
     7081 ttcatgatat actcgatgaa ggaatagagc ttggtgaatt ttatatcaga cgcttaatat
     7141 ccactcattc cataatttct gctcttgata aacaaaaagc tttagaaact atacaaaaat
     7201 tcacctttaa tcttgaacct ttagtggcaa attcttacac tagtctagtt tcaaatttat
     7261 taaaagtaga tgaaaaattt attgtcttat cacaaaattc aaaaaaaacc atacaaaccc
     7321 ctttaatttc tcaaaataaa tacaattttc ctaaagaaaa aattcacatt gcagaattag
     7381 aacttatagc ttttttaaaa cagcatccag atatatgtaa cgattttaag caaattagtg
     7441 atagtgtttg ttttaagcat aaaattttat tggataaaat tttagaaaaa aaaggttatg
     7501 aagatagtga tattagagaa tttgaaagta aaaatattcg aaaaaattta aactatagcg
     7561 aattcttgtt aggtatttgc aaggttaatt tagctttttt aaacaatgta aaaattaaaa
     7621 attctacact cgcattaaaa aaacaacttt ttacgcttat tgataaaaat ttaaatcttc
     7681 taattaaaaa tttaaatacc g
//
LOCUS       DARBAC010000081         7646 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.081, whole genome shotgun sequence.
ACCESSION   DARBAC010000081 DARBAC010000000
VERSION     DARBAC010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7646
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.081"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..66)
                     /locus_tag="SB799_001317"
     CDS             complement(<1..66)
                     /locus_tag="SB799_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEG0868552.1"
                     /translation="MKFENLIRKILGKKRFELLKFL"
     gene            complement(63..419)
                     /locus_tag="SB799_001318"
     CDS             complement(63..419)
                     /locus_tag="SB799_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEG0868553.1"
                     /translation="MKPKYHFLNNARYALEGLFALFKNEMAFRIELCIIIPAIVFSFF
                     LKVSFLEHLLLISVLILILIVEALNSAIEACVDLITNEWHEKAKIAKDCASAAVFFSV
                     LLALFVWGFILYNIYL"
     gene            complement(416..1954)
                     /gene="eptC"
                     /locus_tag="SB799_001319"
     CDS             complement(416..1954)
                     /gene="eptC"
                     /locus_tag="SB799_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HEG0868554.1"
                     /translation="MLRLTWLQFTFFNSLMIVLLNFNLFYFVYEKNTQNWFITFVFIV
                     AYFALVHVICSLLFIKFFTKFFSILFIISSFLSVYFISFYGVLIDSDMIQNVVQTDIK
                     EVKDLLNLKLILFIVLALLLVFYVVKVKIDYYDSFKSHLKIKIINIISGLIVVCAVLI
                     PLSKTFLPFFRNYNEIRMYNTPFYQIYAVYRYYIRFVKAKPEFKTIANDAYRENNHTK
                     KLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSI
                     SKRENYSSSEFQENAMDVLYKTGVDTAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLL
                     APFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDNKALIN
                     TYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENDIYLHGMPYAIAPSY
                     QTHIPAIFWSNDENLMNLAKEHKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKL
                     KANP"
     gene            2072..2830
                     /gene="xth"
                     /locus_tag="SB799_001320"
     CDS             2072..2830
                     /gene="xth"
                     /locus_tag="SB799_001320"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEG0868555.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            complement(2849..4009)
                     /locus_tag="SB799_001321"
     CDS             complement(2849..4009)
                     /locus_tag="SB799_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868556.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLSKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYEYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
     gene            complement(3999..4262)
                     /locus_tag="SB799_001322"
     CDS             complement(3999..4262)
                     /locus_tag="SB799_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HEG0868557.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVKASEIFQEILGQREY
                     KFEHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            complement(4240..4713)
                     /gene="moaC"
                     /locus_tag="SB799_001323"
     CDS             complement(4240..4713)
                     /gene="moaC"
                     /locus_tag="SB799_001323"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEG0868558.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITSRIATASGMIYMSQEAFDVIK
                     NNTAKKGPVLQTAIIAAIMGAKKTSEIIPMCHPLMLSKVETDIMEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDILLESKEGGKSGKFVRS"
     gene            4806..4961
                     /locus_tag="SB799_001324"
     CDS             4806..4961
                     /locus_tag="SB799_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HEG0868559.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMD"
     gene            4964..6274
                     /locus_tag="SB799_001325"
     CDS             4964..6274
                     /locus_tag="SB799_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868560.1"
                     /translation="MSKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFLCIVLLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIVVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKIGIIKSCVFFSVFFGIVSLLYFNTLYRQNADFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALDNLSNFWRFSLGIYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(6243..6722)
                     /gene="cheQ"
                     /locus_tag="SB799_001326"
     CDS             complement(6243..6722)
                     /gene="cheQ"
                     /locus_tag="SB799_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HEG0868561.1"
                     /translation="MMKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNVEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(6750..7607)
                     /gene="cheP"
                     /locus_tag="SB799_001327"
     CDS             complement(6750..7607)
                     /gene="cheP"
                     /locus_tag="SB799_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HEG0868562.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAE
                     IISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGIGNIINIVTADSIRDSFKID
                     VSPYGLDTQNFLKTCNEEATFITNWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REEVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLEEAKTQGINFDLNNLLSKLPSK
                     AKENLNKED"
BASE COUNT         2714 a         1147 c         1018 g         2767 t
ORIGIN      
        1 taaaaatttt aacaattcaa aacgcttttt tcctaaaatt tttcgtatta aattttcaaa
       61 tttcataagt aaatattata taaaataaag ccccaaacaa aaagagctaa aagcacacta
      121 aaaaacactg ccgcactcgc acaatcttta gcgatttttg ctttttcatg ccattcattt
      181 gtaatcaaat caacacaagc ttcaattgcc gaatttaaag cttctacaat taagataagt
      241 attaagacac ttatcaataa caaatgctcc aaaaaactaa cttttaaaaa aaaactaaaa
      301 actatcgcgg ggataataat gcaaagttca attctaaacg ccatttcatt tttgaataaa
      361 gcaaaaagcc cttctaaagc atatcttgcg ttatttaaaa aatgatattt aggcttcatg
      421 gatttgcctt aagtttagga tttaataaat catattctgg ttcataaaca cttgttttta
      481 catcaaaata tcctaaaaga gtgctaaaaa gattatcttg agaaagtttt aaacctttat
      541 gctctttagc taaattcatt aaattttcat cattgctcca aaaaatagca ggaatatgag
      601 tttgataact tggtgctata gcataaggca taccatgaag ataaatatca ttttcaccca
      661 aactttcacc atgatctgaa agataaaaca aagaactttc atagcttttt tgctctttta
      721 atagttttat aatctcactt aaaagataat ctgtataaag taaagtattg tcataagtgt
      781 tgattaaagc cttgttatca cattttgaaa gctcattagt atcacaagtt ggagtgaatt
      841 ttttaaattc acttggatag cgtttataat aagttggccc atgagaacct tgcaaatgaa
      901 gaactattat attttgatca cttaaatgat ttaatttttc tttaaaagga gcgagtaaat
      961 tttcatccaa atcactagaa agcttttgct tataagctaa tctatcacaa acccctttac
     1021 aaccaccaga attattatca aaccatgcag tatctacacc tgttttataa agcacatcca
     1081 tcgcattttc ttgaaattct gaacttgaat aattttcacg cttagaaata gaaaacatac
     1141 aaggtaaact taccgctgtt gctgttccac atgatgaaaa attatcaaaa aagactacat
     1201 tatctttttt ggtataaaaa ttggtatcat ttttagtata tccacccaaa gagtaatttg
     1261 ccgctctagc ggtttcaccc accaccaaaa ccaaaagttt tttagtgtga ttgttttctc
     1321 tataagcatc attagctata gttttaaatt ctggcttagc ttttacaaaa cgaatataat
     1381 agcgatatac ggcataaatt tgataaaaag gagtattata cattcttatt tcattatagt
     1441 ttctaaaaaa aggcaagaaa gttttactta aagggattaa aaccgcacaa acaacaatca
     1501 aacctgatat tatattgata attttaattt ttagatggga tttaaaacta tcataataat
     1561 caatttttac tttaacaaca taaaaaacca ataataaagc caaaacaata aataagatca
     1621 attttaaatt taacaaatct tttacttctt taatgtctgt ttgaacaaca ttttgtatca
     1681 tatcagaatc tataagcacc ccataaaaac taataaagta aacacttaaa aaagatgata
     1741 ttataaataa tatagaaaaa aatttagtaa aaaactttat aaaaagcaaa gagcaaatca
     1801 cgtgaacaag tgcaaaatag gccacaataa aaacaaaagt tataaaccag ttttgtgtat
     1861 ttttttcata cacaaaataa aataaattaa aattcaacaa tacaatcatc aaagaattaa
     1921 aaaaagtaaa ctgaagccaa gttaatctaa gcatataaat cccacctcca aatttaagct
     1981 tttaatttta ttgaattttt ttaaatggat tgtagtttga aatcttttta tgttatgatt
     2041 tacactttta atgaaaattt taaggaaaat aatgaaacta ctttcatgga atgtcaatgg
     2101 cttaagagct atttgtgata aaaatgcact tgattggata gcacaagaac aaattgattt
     2161 tataggtttt caagaaatca aagcacatga agataaattt cctaaaaaaa tttatgaata
     2221 tccttttaaa cacatgtatt ttaattctgc taaaagagcg gggtattctg gggtaatgag
     2281 tctttgtaat tttgatagcg aagtaaaaaa atgcgaattt tttgatgatg aagaaggtag
     2341 ggttttagaa caccgtttta aaaatatcgc actttttaat atctattttc caaatggtca
     2401 aaaagatgaa gagcgtttaa attttaagat gaaattttat gcagattttt tagtatattt
     2461 ggataaactt ttaaaggatg ggtttgaaat tatcatttgc ggtgatgtca ataccgctca
     2521 taaagaaatc gatcttaccc acccaaaagc caatgccaat acttcaggtt ttttacctat
     2581 agaaagagct tggattgatg atttgctaaa acttggtttt atagatactt ttagagaaat
     2641 taatggcgaa atcaaagaaa aatactcgtg gtggagctat agaatgaaag caagagaaag
     2701 aaatgtaggc tggaggattg attatttttt catttcaaag ggtttaaaag ataaacttaa
     2761 aaacgctttc ataagagatg atatttttgg ctctgatcac gcacctgtag gtatagaaat
     2821 agatatttaa tatcccaaaa atgggatatt attttttaac aaattttttt gctttttccc
     2881 aaagtcttac accgagcttt ttagcttttt tagaatttaa atctttgtat ttttcactag
     2941 caattttttc taattcaaaa atttcttgtt taaaacgatt taattttctt tgagtaagtt
     3001 tattaaaatc attaatcttt ggatttttct taatatcatt taaaactaat attagttgct
     3061 ctctgctttc acctgcaaga cgtctaaatt tagcaaaaag attatcaagt tcatgttcta
     3121 gtaaattctc aactatactc ttacaaggat cattttgtag ttgaatctct ttttttaaaa
     3181 gagcaataaa atcatcttct atacctatta gttctttgct ttttaaacta acatcttctt
     3241 caaaatttgc ataagttaat gaagctttaa atttttccat tgccaaaaca ataccatctc
     3301 ttgtgccttt aatcacacct aagcaaagat cttttgcata agccatagat tcattggcta
     3361 tttcaaaagc agtatttaaa ataatacttg aaatttttaa aattctttct ttttcaaaat
     3421 gagcttcaca aatggcatta tatacgagat ttttagctat ttcactactt gtaagttcta
     3481 tatcttcagc cttttctaat gtagttaaaa aagcactttc agcggtttct tttaaaattc
     3541 caagcatttc tatatcaaat aaaatagcat catttaaacc accgctaaat tcatcacaaa
     3601 aagaacattc ttgtaaaata ttctcgaatt caaaaaaatt atcactgatt tgatttttaa
     3661 tcaaattttt ttgattttca atctgtttgt ttaataattc agcttcgcta atatactcat
     3721 aaagcgaatt ttgagcatct acaatactcg ccttaaccaa agctttgata acctttgtaa
     3781 cattttcatc atcaaaaaaa tcaagttttt tcaaaatagt taaaaattca accaaaagag
     3841 aatttaaaac tttttttgtt tcatgaggat tatgcgaaat ttgcttatat gcaagattaa
     3901 aactcaagtc ttcaagtaaa tcacttgctt catctttact gagatttgat aaagaatttt
     3961 caaaaataat taaagtattt ttcatttttc cttctttctt aaagtacaaa ttttgcttta
     4021 gcttttaatt tatcaaatat atccaaacga tcttttttgc tatcaacata aacatttaat
     4081 aaataacttt gatattttcc actcgcactt gaattcgaat gttcaaattt atattctctt
     4141 tggcctaaaa tttcttgaaa aatttcactt gccttaacat gcacctcaaa aatcacctta
     4201 taatcccaaa aagtaggata attgatctgg ggttcttttt taagatcgca caaatttacc
     4261 acttttgcct ccttctttgc tttcaagcaa tatatccgta atcctcattg atttatctat
     4321 agccttaatc atatcatata tagttaaaag tcctatacta accccactta aagcttccat
     4381 ttcaacccct gttttacctt cacacttaac tgttacaata agcttaaatg cacattcttt
     4441 aacaaattcc ataatatcag tttcgacttt agaaagcatt aaaggatggc acataggaat
     4501 aatttcactt gtttttttag cccccattat agccgcaata atagctgttt gaagaacagg
     4561 accttttttt gcggtattgt ttttaattac atcaaaagct tcttgactca tatatatcat
     4621 accactagct gtggctattc ttgaagtaat atttttatcg cttacatcta ccattttagg
     4681 atgatttttt tcatctaaat gacttaattt cataaattca ccttttaaaa aattataaaa
     4741 attatagcaa aaccaaacaa atttaagata aaataagctt tgtattttta tttaaggaga
     4801 aaacaatggc ttatgaagat gaagaagatt taaattacga tgattatgaa aacgaagatg
     4861 aagaatatcc acaaaatcac cataaaaatt ataattacga tgatgatgat tatgaatacg
     4921 atgatgataa caatgatgat gatttttatg agatggatta agaatgagca aaacccttaa
     4981 ccaaaaagat ataaaagttt taggactttc atcattaggt ggaactttag aattttatga
     5041 ttttattatt tttgtatttt ttgcaaatta tatttcaaca aacttttttc caaaagattt
     5101 aagtagtttt tggcaaatgt ttaatactta tggaatattt gcggctggat atttagcgcg
     5161 tcccttaggg ggtgtgatac tggcacattt tggagataaa tttggacgca aaagaatgtt
     5221 tatgattagt attttgttaa tggttattcc aacttttact ctagctttta ttccaaatta
     5281 tgaaagcata ggttttcttt gtattgtgct tttagttttt atacgcattt gtcaaggcat
     5341 tgctataggc ggggaacttc ctggagcttg ggtttttgta tacgaacacg caccacaagg
     5401 tcaaaaaaga acttatttgg gaattttaac cgcttcggtt gtaggtggaa ttttattagg
     5461 tagtttagtt tttttaatta tgaataaaat ttatacccaa gaagaacttc atgaatgggc
     5521 ttggagaatt ccattctttt taggtggaat tttcgggatt atttctgctt atttgagaaa
     5581 atttttaaga gaaactcctg tttttgaaca aatgaaaaaa gacaaggctt tagaaaaatt
     5641 tcctttaaaa gaagtgttta aaaaagctaa aatgggaatt gttctttcta tgatgattac
     5701 ttgggttttg acaggttgca ttgttgtaat gattttgctt atgcctagct atatggcaaa
     5761 aatacttcaa attaacactt ctatacaaac ctatcttcaa ataggtggaa ttttacttat
     5821 ttgcctaggg tgtattataa gtggaatttt agcggataaa ataggcatta tcaaatcttg
     5881 tgtatttttt agtgtttttt ttggaattgt aagcttgctt tattttaata ctctatatag
     5941 acaaaatgct gattttaacc tagtagcttg cttatattta cttgtgtgtt tttttagcgg
     6001 agtgatgaat ttttgccctt taataatgag tgaagtattt gatgcaaaaa ttaaattttc
     6061 aggactttct ttttcatata atattgctta tgctatagct ggaggtttaa ctccgcaact
     6121 tgcttttttc ttgcatagtt ttgccttaga taatttaagt aatttttggc gtttttcttt
     6181 gggaatttat gttttctttt tggctattat agctttgcta tgtgcattta ttttttctta
     6241 tcttaataat acccaacgca catactctca gtgattttaa tacgcttttc aaaaggagct
     6301 gggctaaaaa aatggcattt ttctatataa atatgctgat gataatttag ccctaaaaaa
     6361 tcataaaatt tttttagatt aacaaattta atcccacaaa tctccttaag ctctaaaagt
     6421 ttgtaaatag aagaattatt tttttccact aaatgagagg gggctaatcc agtaaaagaa
     6481 caaaaagcac ttgccaatac aaaaccattt aaaccactac attgccttaa agcttgctga
     6541 tgtttttcta aaatgcaatt tctatgcaaa aatataattc ttgttccttg atatctgcct
     6601 atttctacat ttttccaaaa tttataagca ttttttgaaa ttccagcaaa acgatgaaat
     6661 tcggcattta aaatatagtg atctaaaaat tcattaggag gtaagattaa acttttcatc
     6721 actacaattt agagccctaa aaaggctctt taatcttctt tgtttaaatt ttccttagct
     6781 ttgctaggaa gcttagataa aagattgttt aaatcaaaat taattccttg agtttttgcc
     6841 tcttcaagta aagcaactgc agcttttgcg ttaaatggag aagagccatc atgcggagca
     6901 aaaagatgat ctgttattgc taaagcataa gcggattttt tcacttcttc acgagcagca
     6961 tgaggagtgc gaacaaaaca tatactttca atcaaaacat catcaaaatt ccaacgatgt
     7021 aacaaaaatc ccaagaaaga aatatgatct acgcctaaaa attcattctc cgctaaagca
     7081 agattttcat ttttatttaa aaaagctaaa aaatccttat ccttatgatt ttgtataaga
     7141 aaatttgaaa aaataacaat accaagcctt aaaagcattg cgcaaggaac taaaagatga
     7201 gaaagttttt tatcttcatc attaagccaa tttgtgataa aagttgcctc ttcgttgcaa
     7261 gtttttaaaa aattttgtgt atccaaacca taaggtgaaa catctatttt aaaactatct
     7321 ctaatggaat cagccgtaac tatattgata atattgccaa tgcctaataa agtaatcact
     7381 tgatttatgg ttgtaatttc ccttgtaaaa ccataataag gagaatttgc taattgcaaa
     7441 agcttagccg tcatcaacgg atcacttgaa atgatttcag caactttcat ggtttctata
     7501 tttgaattag cctcgctcac atattttctt aacttactta cagtatcggg taaaggtggc
     7561 aatacttcaa cgctttttaa taaaagctca ttcatatctc caatcatatt tgatttatcc
     7621 ttgaagttag tattattata atttat
//
LOCUS       DARBAC010000082         7275 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.082, whole genome shotgun sequence.
ACCESSION   DARBAC010000082 DARBAC010000000
VERSION     DARBAC010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7275
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.082"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            49..658
                     /locus_tag="SB799_001328"
                     /pseudo
     CDS             49..658
                     /locus_tag="SB799_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344631.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(641..1735)
                     /gene="pdxA"
                     /locus_tag="SB799_001329"
     CDS             complement(641..1735)
                     /gene="pdxA"
                     /locus_tag="SB799_001329"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HEG0868563.1"
                     /translation="MKKLAISIGDINSIGLEILVRSHEELSKICTPFYFIHENLLDKA
                     SKLLNLKLFNAKIVAFKDGKDYEFNFIKKENSLEIYSFCLPLGFKVDENFEIKAGEID
                     AKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMILGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKIGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLYSKKDEKFFKKALKDENLQKELLLNFKGKGVYLP
                     YPLVADTAFTKAGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAINLNPKA"
     gene            complement(1732..2505)
                     /locus_tag="SB799_001330"
     CDS             complement(1732..2505)
                     /locus_tag="SB799_001330"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEG0868564.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPVNLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYTNLHNAL
                     FSNISHTAFALKELDQDKKTLQAQFEKELQNLKLCAKKGVELGLKVAAGHGLNYKNVK
                     LIVKIKEICELNIGQSIVARSVFTGLKNAILEMKELIKR"
     gene            2562..3536
                     /locus_tag="SB799_001331"
     CDS             2562..3536
                     /locus_tag="SB799_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEG0868565.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNTLSILAKEQDLSKARAVATAAFRKASNTNEIFAHLKKEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFGKSFKSFDFGIISFYEKNYHSY
                     YKSCISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFRAFDEVAMIKKELRSL
                     GVKTVVLNSGVPTTLSALKQNISYEKYEASRVNGKKLYHKDFLNYAIKLFHMEEKKAI
                     KEVGAMRKNYLSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
     gene            complement(3533..4483)
                     /locus_tag="SB799_001332"
     CDS             complement(3533..4483)
                     /locus_tag="SB799_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEG0868566.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLR
                     TLQKKTLEGVEFTHKDSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGFDYGTLNPQSFSLRIY
                     QKHEVFSPFEVSLKDFFGKSDLTYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFE
                     DLLKYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
     gene            complement(4480..5301)
                     /locus_tag="SB799_001333"
     CDS             complement(4480..5301)
                     /locus_tag="SB799_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEG0868567.1"
                     /translation="MKALWILLSLTLWLFGAQNLELIKGQALFLELDKKNFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     VENKKIFPPKTIQERIAKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRAATGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KIDVKVGQKIKKGELIGLSGASGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            complement(5298..>7275)
                     /locus_tag="SB799_001334"
     CDS             complement(5298..>7275)
                     /locus_tag="SB799_001334"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEG0868568.1"
                     /translation="EIGTEELPAIPLLKELANIEKKWKNVLEEYRLVNDFKFYYTPRR
                     LVFFHENFAEKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELTFKEIKG
                     KEVLYHQKAIKGLQSQEILGEMIEKFLKSLSFGKSMRWGANSFEFIRAIRSIACILND
                     ELVNFQSYGVKSAKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRKEKILEQ
                     FKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPGEVIITSMRENQRY
                     FAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQNGLKPEK
                     LAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLATQMVYEF
                     TDLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANKLDTLIG
                     LFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSSHYKSFDMQILKD
                     FIFERLYTFYTVNASFVKAVLSSQNTDLIHINQSVNALIKLSKKDNFNENFATFKRLA
                     NIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDEFFNQVM
                     INAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
BASE COUNT         2457 a         1051 c         1097 g         2670 t
ORIGIN      
        1 attcaaaata tttttgttaa aataaaataa aaattttaaa ggtaaataat gaaaaaaatt
       61 attttattgc ttggtttaag tttggcgagt ttaggggctt tgagttttga tgagcttatt
      121 tataaagatg aagtaaaacc tagttttgat tgctctaaaa tcaaatatga tggcaaaagt
      181 gatgatgagc ttatgatatg caataaaatt ggtgtgcgta atgaatttga aaataaaaaa
      241 cttgctttag tagataacat ctatagcagt ttgtatcaaa atatttcaaa aaaagcagat
      301 aaaaagacga aaaaagattt taaagccaat ttcaaaaaag atgattaaag aaagaaaaat
      361 ttgtataaaa aatatgcaaa atacaaaagc agaggaaaat cctattttac ctttactcaa
      421 tgcaagtgat tgcatgcaag aagcttatgc taaagcttta ttagaactta tgcaaagagc
      481 aaaaaaagat acaaagatta aagaagtttt agagcaaatt tttaaaaata aagttgataa
      541 atatgaaaat ttactcactc aaagtttaaa taccaataaa gatttgcaag attttataga
      601 cagcttggct aaagaagatt tgattgattc taggctaaat ttaagcttta gggtttaaat
      661 tgattgcaaa tttagccgct tcaaaataac ttttagtgtt gattttagca tttttatagg
      721 ccttatcaaa ggccgtgcca tgatcaacgc tgacgcgtat gatgggtaaa tttaaactca
      781 cattgatgct tttatcaaaa tacaaggcct ttaaaggagc aagggcaaga tcgtgataca
      841 tagctactaa acgattgcag ttttttaaac cagccttggt aaaagctgta tcagctacta
      901 aaggataggg tagataaacg cccttgcctt taaaatttaa aagcaattct ttttgtaaat
      961 tttcatcttt taaggctttt ttgaaaaatt tttcatcttt tttagagtat aaaaaggcat
     1021 tgacaaaggc tatagctttt tccatgattt tttcttcttc tccacctata actccataat
     1081 ctccagcgtg aggattaaaa cctaaaagtc ctattttttt aaaatgcgtt tctttgtaaa
     1141 aatcttttaa aaagatgctt aaatttttaa aagtgatttt tttactcacc ttagctaaag
     1201 gtatatgttc gctaaaaagc cctacaaaaa gttctttaca acctaatatc ataatggcat
     1261 tttttttaaa aaaatccctt aaagcatcgg tatgtccttt gtatttaagt cctgcatctt
     1321 cccaagcttt tttgtgtata ggtagagtaa gcaaggcatg ggcgtgtttt tcatagacaa
     1381 aataacttgc cgccttaaaa cttaaaaaac cataaagtcc actttttgca tctatttctc
     1441 cggctttgat ttcaaaattt tcatccactt taaagcctaa aggaaggcaa aaagagtaaa
     1501 tttcaagaga attttctttt tttataaaat taaattcata gtcttttcca tctttaaaag
     1561 ctacgatttt tgcattaaaa agttttaaat ttaaaagttt tgaagcttta tcaagcaagt
     1621 tttcgtggat aaaataaaaa ggtgtgcaga ttttgcttag ttcttcatga gaacgcacta
     1681 aaatttcaag tcctatgctg tttatatcgc ctatgctaat ggctagtttt ttcatctttt
     1741 aataagttct ttcatttcca aaatagcgtt tttaagtcct gtaaatacag atcttgctac
     1801 aatgctttgt cctatattta gctcacaaat ttctttaatt tttactatga gttttacatt
     1861 tttgtaattt aaaccatgtc ctgcggctac ttttaagcca agctctacgc cctttttagc
     1921 acagagtttt aaattttgca attctttttc aaattgagct tgtaaggttt ttttatcttg
     1981 atcaagttct tttaaggcaa aagcagtatg agagatattg ctgaaaagtg cgttgtgtaa
     2041 attcgtataa tgtcccgtat gaagctctat gaattgggct tttaaaattt ttgatttttc
     2101 tatatcttct aaactaggat taataaaaag tgaaacttca atgtttgcat tttgaagttt
     2161 ttctatgctt tgttttaatt tagcatgatt taaacaaagc cccccttctg tagtaagctc
     2221 ttctcttttt tcaggcacta aagtaacgcg gtggggtttg agtttaagag ctaaatttaa
     2281 aatttcatca tttaaagcac attctaaatt gacagggctt ttgcaaaatt ttataatatt
     2341 ttccaagtca aaatcctgag catgacggcg atcttctctt acatgcaaag tgatttgatc
     2401 cccgtgtcta gctactataa aagcagcttc taaaagatca ggatcattta ccattctagc
     2461 ttgtcttaac actgcaatat gatcgatatt tacacctaaa agcatatttt tcctttagaa
     2521 ctttttttgc tattatacta taaaatcaaa taaggaaagt catgttaggt atagatcttg
     2581 gttcaaatac tttaagagca gtacaaatgg atgaaaaatt aaataaatta aaagaatatg
     2641 aatttgttat tggggcagcg aaaaatctaa atcaaagtgg agaaatttct aaagaagcca
     2701 tacaaagatt aaaaaatact ttgagtattt tagctaaaga gcaagattta agcaaagcga
     2761 gagctgtagc gactgcagct tttagaaagg caagcaatac aaatgaaatt tttgcccatt
     2821 taaaaaaaga atttgggatt gattttaagc ttatagatgc caaaagtgaa gctaagatca
     2881 gtgttttagg tatgcaatca ggtttaagaa ggcttaaaat ttggggagag tttgcatatt
     2941 gtgatttagg aggggcttct tgtgagcttt cttttggaaa aagttttaaa agttttgatt
     3001 ttggtattat tagtttttat gaaaaaaatt accattctta ttataaatct tgtatttctt
     3061 ataaaaaatt aataaaaaaa tatcctaaat ttatcataaa tattaaagat aaaaaactta
     3121 aaattcattt tttaattgca aatccctatt taaagcattt agcttttagg gcttttgatg
     3181 aggtggctat gattaaaaag gaacttcgtt ctttaggagt taaaacggtg gttttaaatt
     3241 ccggagttcc tactacactt agcgcattaa aacaaaatat aagctatgaa aagtatgaag
     3301 caagtagagt aaatggcaaa aaactttacc ataaggattt tttaaattat gctattaaac
     3361 tttttcatat ggaagaaaaa aaggctataa aagaagtagg cgcgatgaga aaaaattatt
     3421 tgagtgcagg ttgtttgctg ttttatgctt tgtttgataa acataaactt ctagtcattg
     3481 atgagggttt aagggagggg gtttgtttag cgagtatgaa aaatataaaa ttttagtttt
     3541 tttgaaattc gaaaaaatga aatttttcat caaaattaaa aaataaaatt ttagcttgag
     3601 ataaaaaact ttcgtaagtt ttaatgtttt tattttttgt gtattttaat aaatcttcaa
     3661 aaccaaaatc cattaaagca agactttgtt ttttaaaagc taaaggttta aaatcatatt
     3721 ctttgatgag tttttgaaga tgagtaaaat tgacattata agttagatcg cttttgccga
     3781 aaaaatcttt taaagatact tcaaaagggc taaaaacttc gtgcttttga tagattctta
     3841 agctaaaact ttgtggattt aaagttccat agtcaaatcc cgcaaatata aatctctcac
     3901 aagtttggtt taaatcttta aaaaaatttt caagctctaa actgagttca ccttttttaa
     3961 gatttaaagc tttgcatttt gtgattaaat tttcatccat atttttaaaa ataagtttaa
     4021 aattttctac aaatgccatt ttatcatgat ctataagttc gcaagcaaaa ctatcaaaaa
     4081 gttcattgca aaagaaaaaa gcgttcttaa aatggcattc tttaagacta tctttgtgag
     4141 taaattccac tccttctaaa gtcttttttt gtaaagttct taatttttca tgcggttcta
     4201 tgacgaaaaa agaaatttga gaaaaaattt caggtcttaa ttcaagcaaa gcggctaaaa
     4261 aatcacgact taaatatcct tcattagcac ctatttctac aagttctaaa gggagttgta
     4321 aaattttttt atctattaaa tttaaaaaat gcttggctaa aagtgtgcca aaaagatttc
     4381 ctacgcttac agcagtaaaa aaatctccgt tttttcctat acttacagca tttttataat
     4441 agctttcatg gagccaagca tggaaaaagt cactaaattt cattgaaaaa tagcattaaa
     4501 tttggataca aaatccaaag gatcaacttg tttgcctcca gctaaaattc caaaatgcaa
     4561 atgcggccca cttaccctac cactagcccc actaagtcct ataagttcac ctttttttat
     4621 cttttgtcct actttaacat cgattttaga aagatgataa tattgtgaat aaattccaaa
     4681 accatgatca atgactactg aatttcctgc gaaataacga tcttttgcaa tttttactac
     4741 acctgaattg gctgcataaa taggcgttcc tgtggcggct ctaaagtccg ttccactatg
     4801 ataacttgct actttttcat taaaagttct tgctttgcca aaatcacttg tgataaaaga
     4861 atttaaaggt atattaaaag caccgttaaa taaagctttt ggagtataag aactataaat
     4921 cgcattggct tcttttaatt ctttagcgat gcgttcttgt atggtttttg gtggaaaaat
     4981 ctttttgttt tcaacttgca atttttcact tttataatta ccttctaaag tttttatgaa
     5041 aatttcttct tttttatctt tataaaatgc gataagtttt gtattttgcg ggggattttt
     5101 gtaaggtagg gaaaaaatag ctagaatttt ttcttgattt ttaggatgcg caaatgtggg
     5161 aatattttta tcattatttt ttaaagataa aaaatttttc ttatctagtt ccaaaaataa
     5221 agcttgacct ttgatgagtt ctaaattttg agctccaaaa agccaaagag taaggcttaa
     5281 aagaatccat aaggctttca taggcttaac tctttaagat cggcgatttt taaaaactcc
     5341 gcataaattt cataaaccaa agcttggcga ttatttttaa gtttttcatc ttcagcatta
     5401 atcatcactt gattaaaaaa ctcatcaata aaaggcttaa gtgcaaaaag attttcaagt
     5461 ttttcttgta aagagttggc tttagttttt tcttgaaaag ctttgtaaag tttactttct
     5521 gcttcttgaa caaaaagact ttcatcaact ttatgaggat ttttagtggc gatattggct
     5581 agtcttttaa aggttgcaaa attttcatta aaattatctt ttttgctaag ttttataaga
     5641 gcatttacgc tttgattgat atggataaga tctgtatttt gtgagcttaa aaccgctttt
     5701 acaaaagaag cattgaccgt ataaaaagta taaagtcttt caaaaataaa atcttttaaa
     5761 atttgcatat caaagctttt ataatgactt gaaagttttt ctaataaaat ttggatatca
     5821 aattctttat ttaaatttag agcgatttta atgatcccat tggctgctct tcttaaggca
     5881 taaggatcct ttgttccgct tggaattttt cctatgctaa aaagtcctat aagggtatca
     5941 agcttgtttg caagggctac tatgcttgaa aattccgtgc ttggaagtgg agcttgttcg
     6001 gaattaggaa gatattgttc tttgatggct aagcaaattt cataatctaa gcccattttt
     6061 tgcgcataat aacttcccat aatgccttgc aaatcagtaa attcataaac catttgtgtg
     6121 gctaagtctg ctttggcgta ttttagtgct gtgctgatat tttcgatttt atcattatga
     6181 agcatttgac ataaaatttc agcaatttta atctctctta aacttttatc ttgcattgtg
     6241 cctaaacctt caagataggt cattttggca agtttttcag gttttaaacc attttgtaaa
     6301 tcattttgat aaaaaaacat tgcatcgcta agtcttgcac gcaaaactct ttcatttcca
     6361 tgtatgattt ttgaataatc tttacatact gcattgctta ctactataaa atgattactt
     6421 aagcctttat cgttaaaaac tgcaaaataa cgttgatttt ctctcattga agtgatgatt
     6481 acttcgccag gaatttctaa aaattcttct tcaaagcttc ctaaaagtgc attagggtat
     6541 tctgtgatag caactacttc agctaaaagt tcttcatcct ctccaatttg tatatttttt
     6601 tgactttcta tgagtttaaa ttgctcaagt attttttctt ttcttttgat tggatcaagg
     6661 ataatatagt ttttttctag tagttcaaaa tattcttttg cattgttaaa atcttgcaaa
     6721 tcataactta cacttctgtg aatgaaagtt tttttagcac tttttacccc ataactttga
     6781 aaatttacaa gttcatcatt taaaatgcaa gctatagaac ggatcgcacg gatgaattca
     6841 aaagaatttg caccccagcg catacttttg ccaaaactaa gactttttag aaatttttct
     6901 atcatttctc ctaaaatttc ttgactttgt aaacctttaa tagctttttg atggtataaa
     6961 acttccttgc ctttgatttc tttaaaagtg agttcatttt cactgatccc tgctttttgt
     7021 aggaagcttt gccccgcagg agttaaaacc ccatctttat aggcgacatt tttaggtgct
     7081 cctataaatt cagcaaagct atcttcttgt ttttctgcaa aattttcatg aaaaaaaact
     7141 aaacgacgcg gagtataata aaatttaaaa tcatttacca agcggtattc ttctaaaaca
     7201 tttttccatt ttttttctat attagctaat tcttttagca aaggaatagc aggtaattct
     7261 tctgtgccaa tttct
//
LOCUS       DARBAC010000083         7232 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.083, whole genome shotgun sequence.
ACCESSION   DARBAC010000083 DARBAC010000000
VERSION     DARBAC010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7232
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.083"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            280..993
                     /locus_tag="SB799_001335"
     CDS             280..993
                     /locus_tag="SB799_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEG0868569.1"
                     /translation="MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            968..1159
                     /locus_tag="SB799_001336"
     CDS             968..1159
                     /locus_tag="SB799_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEG0868570.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            1159..1701
                     /locus_tag="SB799_001337"
     CDS             1159..1701
                     /locus_tag="SB799_001337"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEG0868571.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAY
                     YVRKFAAFFGTNNVDHQARI"
     gene            1750..3963
                     /locus_tag="SB799_001338"
     CDS             1750..3963
                     /locus_tag="SB799_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEG0868572.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            3960..4601
                     /locus_tag="SB799_001339"
     CDS             3960..4601
                     /locus_tag="SB799_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0868573.1"
                     /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            4598..5530
                     /locus_tag="SB799_001340"
     CDS             4598..5530
                     /locus_tag="SB799_001340"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEG0868574.1"
                     /translation="MRKVFVTLLLSVASLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            5697..6479
                     /gene="fdhD"
                     /locus_tag="SB799_001341"
     CDS             5697..6479
                     /gene="fdhD"
                     /locus_tag="SB799_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEG0868575.1"
                     /translation="MDPLFTTQILKYKGDDSFTCDDTLVREIKLEIFINDERVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDVKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKARLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            6472..7209
                     /locus_tag="SB799_001342"
     CDS             6472..7209
                     /locus_tag="SB799_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEG0868576.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNVNIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKAYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRALELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
BASE COUNT         2523 a          891 c         1495 g         2323 t
ORIGIN      
        1 attaatttta ctcggaagag aatcaaagat ataaatttta tgcaaagtat tttatttttt
       61 caaatataaa atcaactcaa atatctaatt ttcaatactt tgatatgatt ttttaagatt
      121 ttaaatcctt gtggaatttt attgaaattc agtgattttt aaatcaaata gtattaagat
      181 aaatcgattt aaaaatcggc tttaaaatga atattaggta tattttgcat aatattcatt
      241 caagcaaaat ttaaagctat ttttgaaaat tttgaatgca tggaggcttt aatggatttg
      301 gaaaaattaa gattagctag aagtctttat tatcaatgtc taggagagct ttttgttttt
      361 tcattttctg aagaaagatt gtcaaaatta caagagtatt taaagacaat gcaagaatgt
      421 ttatttgatg aaaatttaaa atcaaatttt gatatcttgc ttaagcattt agatgatgaa
      481 aattctatac aagcattttt taaagaatac gatttgcttt ttttaagtct taaaaacagc
      541 attccaacga ctttttctta catagaagaa ggttttgaaa attcaaatcc tttactttgc
      601 gtgcgtcaaa ttttagtcaa aagtaaaata agacgcaatg aaaaattttt taaagaaagt
      661 gaagatagtg ttggattttg tttattgttg atgagtgaat ttttaaggca aaatgaagat
      721 gatttagcta aagagctttt tgaaaaagtg atcaataaaa gcattgatga gtttttaggc
      781 gatgttttca tgaataaaaa tgcgaattta tataaggaaa ttgcaagtat tgcgatggct
      841 tttatggaat ttgaaagact ttgctttgaa gtggaaaaac ctgcaaaaat aaattctaaa
      901 aaagtgcaaa atgatctatc gcgttcggaa tttttaagaa gagaagcaaa taaacaaagg
      961 aggactcgtg aaaaatcgca gggaatttct taaaaaatcc gcttttgcct taggggctgc
     1021 tggagtgctt ggtagcacaa ctttagctct agctaaagat gaagaaagaa aagatttggt
     1081 taaaggtaaa agcaagaaaa aagaagtgct ttttcaaaga agtgctaatt gggaaaatta
     1141 ttatataaag gctgagtaat gtcaagtgta ggtgaaaata tcaagcttac gcgtcgttct
     1201 tttcttaaaa tggcagcact ttcaagtcta gcaacaccgt tgcttgctag aagtgaaact
     1261 ttaagagaag cgagtgctga tgagcttaaa gaagcttatg aaggtagtaa aaaagtaaaa
     1321 acagtttgta cagcctgttc tgtaggctgt gggattattg cagaagtgca aaatggtgtt
     1381 tgggtgcgtc aagaaatcgc tcaagatcat cctgtgagtt caggtggaca ttgctgcaag
     1441 ggatctgata tgatcgatat ggtgcgttca catgtgcgtt taaaatatcc tatgaaaaaa
     1501 gaaaatggag aatggaaacg cataagttat gagcaagctt taagtgagat cggagaaaaa
     1561 ctagctgctt atcgtaaaga aaatcctgaa agtgttatgt ttttaggttc tgcaaaaatg
     1621 agcaatgaac aagcttatta tgtacgtaaa tttgcagcgt tttttggaac aaacaatgta
     1681 gatcatcaag ctagaatttg acacagcgca acagtcgccg gtgtggcgaa tacatttggt
     1741 tatggcgcta tgacaaacca tcttggagac attcaaagaa gtaaatgtat cattatcatt
     1801 ggggcaaatc cagcggtaaa tcatcctgtg ggttttagac atttcttaaa agcaaaagaa
     1861 aaaggtgcaa agcttatcgt tgtagatcct agatttacaa aaagtgcagc aaaagcggat
     1921 atttatgcaa gaattcgtcc aggaactgac attgctttca tgtatggaat gctaaaaatc
     1981 atctttgatg aaggtttaga agatacaaaa tatcttgatg aaagagtttt tggaatcgat
     2041 aaaattcgtg aagaagcggc aaaatggaca gctgaagagg tggaaaatgt tacaggaatt
     2101 tctaaagaac ttttggtgca aatcactcac gaagtagcta aaaacaaacc aactacgctt
     2161 atttgggcta tgggtttaac tcaacacact gtaggaactt caaatacacg tttagcacct
     2221 attgtgcaaa tggtacttgg aaatataggt aaatttggtg gtggagttaa tatcttacgc
     2281 ggacatgata atgttcaagg tgcttcagat atggcttgtt tgagcgaaaa tttaccaggt
     2341 tattatcctt taaatgaagc gacttggaga tactatgcca aaatttgggg tgtggattat
     2401 gagtggcttt taggaaattt tgtaagcaaa gattggatgc ataaaaccgg actttcactt
     2461 gctagatggt gggcagcggc tttaaatgga aaagatggaa atgatgctat cgataacgca
     2521 ggaacgcctt taaaagcttt agtagttatg ggaaatggta tcacttcgac tgcacaacaa
     2581 gtaaaagtta aagaaggttt ggaagcttta gagcttttag ttttagccga tccttttgta
     2641 aatgaagcag gcattattgc agaaagaaaa gatggaattt atcttttacc tgcagcaaca
     2701 cagtttgaaa caagcggaag tgtaacagca acaaatcgta gcggacaatg gagatttaaa
     2761 gttgtagatc cactttatga aagcatggaa gatcaagaaa ttttatttga gcttgctaaa
     2821 aaattaggtt tttatgaaga ctttaccaag actttacgcg atgaaaaagg tgagattgtt
     2881 tggcctgaaa atgcaacaag agaaattgca aaagcagtta gaagtatagg gcttaatggt
     2941 tggagtcctg aaaggcttaa aaagcatact ttatactggg ataaatttga tgaggtaact
     3001 ttagaaggaa aagatgaagt tgctggtgag tattacgggc ttccttggcc ttgttggagt
     3061 gataagcacc caggttctcc tgtactttat aataccgaca ttgaagtcgc aaaaggtggt
     3121 atgggcttta gaaataattt tggacttgag tatgaaggag agagtttact tgctaaaaat
     3181 gcgcctttaa attcacctat tgatacaggt tatccacaaa ttactaaaga taatatagaa
     3241 aaagttttag gtattacttt aagtgcccaa gaaaaagaaa aaatgggatc aacttggtct
     3301 tatgatgata gcaatatcat agcaactaaa tgtatagaaa aaggcatagt tccttatgga
     3361 aatgctaaag ctagagctgt agtttggact tttaaagata aaattccact ccaccgtgag
     3421 cctttacatt ctccaagaaa cgatttggtg caaaaatatc caagttttga agatcaaaaa
     3481 gcgctttacc gcgtggatac taaatttgtg tctgtgcaac aagctaagga ttattctaaa
     3541 gaattcccgc ttaatcttgt tactgcaaga cttgtgaatt taaatggtgc aggtatggaa
     3601 aatagagcat ctatgtatct aacgcgttta acacctgaaa tgttttgtga gatcaatcct
     3661 gaattagcaa aagagcaaga cattaaagca ggagatatga tttgggtaca ttctccagaa
     3721 ggtactaaaa ttcatgtaag agtgaaggtt aatccaggtg tagcaaaaga tatgattttc
     3781 ttgcctttcc attttacagg agttatgcaa ggcgtggatt taacgcacaa tttccctaaa
     3841 ggaacaaaac cttatgcaag tggagaaagt gctaatacgg taacaaatta tggttatgat
     3901 atcatgtgtc agattccaga gactaaaggt gggctttgta gaatcagtaa ggatggaaaa
     3961 tgagtaaggt aaattttgca aatttagaaa aagaacgctt gaaattcttt tgtgataatg
     4021 agcgttgtat tgattgtaat ggttgtgcgg tagcttgtga tgaagcacat gagcttccta
     4081 ttcatattcg ccgtcgccgt gtgattactt taaatgaagg aattcaagga aaagaagttt
     4141 caacttctat ttcttgtatg cattgtgatg atgctccttg ttctatcgtt tgtcctgtgg
     4201 attgttttta catccgtgct gatggtattg ttttgcatga taaagaaatt tgcataggtt
     4261 gtggatattg tctttatgct tgtccttttg gtgcaccaca atttccaaaa gatagtgttt
     4321 ttggaaataa aggcattatg gataaatgta ctatgtgtgc aggtggccct gaagcaacga
     4381 attcagaaaa agaaagagaa ctttatgggc aaaatcgtat cgcagaagga aaagttcctg
     4441 tatgcgctgc gatgtgttcg acaaaagcac ttttagtagg tgaaagttct aaaatagaag
     4501 agatttatca taatagactt atgaatagaa attatggcat tccaaatcct tcggaaagtt
     4561 tggagtggaa gattgcttac acaggaaagg aacgcttatg agaaaagtat ttgtaacgct
     4621 tttattaagc gtagcgagtt tatttgctta tggtagcgag agaatgggac aagatactca
     4681 aatttgggat tttcatcgta ttacaaatat cccaaattat gatacttttg gcaaactttg
     4741 gacaacttta caaggtgaat atatagctac tatagcttta attgctgtta ttgcggtatt
     4801 atctgcattt gctttgcatt atatggttat aggacctaag caattttcac acgatggaaa
     4861 gaaaatttat gcttttacat tatttgaaag actttttcat tttatcgcgg caatttcttg
     4921 ggtgatttta gtgccaactg gttttgtgat gatgtttggg gcgacttttg gaggcggact
     4981 ttttgtaagg gtttgtaaaa atttacatgc ttttgcaacg gttttattta tcatctctat
     5041 aatccctatg tttttatggt ggattaaaag aatgcttcct gcaagttatg atatcagatg
     5101 gatgatgata gtaggtggtt atttaagcaa agtaaaacgt cctgtacctg caggtaagtt
     5161 taattttggt caaaaatctt ggtattatat agctgtattt ggtggatttt tgatgataat
     5221 cacaggtgga tttatgtatt ttcttgattt taattccacg gcaattcaag gtctttttgg
     5281 tttaactcaa attgaacttt taagaatttc agctatagtg cataatttct taggcatagt
     5341 gtgtgcagtg ttttttggcg tgcatattta tatggcagta tttgcaatca aaggcagtat
     5401 ccattctatg attagtggtt ataaagaaga agaagaggtt tatattttac attcttattg
     5461 gtataaagaa ttaagcaata aaaagcaaat tgaacctagt ttttcttatg atcctaatgt
     5521 aaaaatttaa tctttaaccg ctatgttatt gcatagcggt agttttaagc ttttttgaaa
     5581 taaatagaac gaattttatt ttataagttg aatctaaaat ctatttttcc atatataaat
     5641 ttgttattta tgtttttttg atataatatt atttaaagat atttaaagga taaggtatgg
     5701 atccgttatt tacaactcaa attttaaaat ataaaggtga tgattctttt acatgtgatg
     5761 atactttagt gcgtgaaatt aagcttgaaa tttttattaa tgatgaaaga gtaggtgctt
     5821 taatggcaac tcctgtagat gaacaggcat tagcaatagg atatttaatg agcgaaaata
     5881 tcattgcgaa agtaagcgat attgagagca tagaaacaaa agatgatggt atgagtgtgc
     5941 atattaaagc aaagattgat aaagaaaatt tagcaaagct taatgctgaa ggtgtagtta
     6001 taagtggttg cggtagagca catactgcca atatcgatcc agaagctatt gaagcgagta
     6061 aaattagttc tgatgtaaaa tttagcaaag atgaaatttt aaaacaaatg agtacttttt
     6121 atactcaatg cgagctttat gagaaaacag gctgtgtaca tacggctaag ctttttgtag
     6181 atgagaaaac tttttttata ggtgaagata tagctcagca taataccata gataaagctt
     6241 taggaaaagc acgtttagct ggggttgatt taagtcaatg ttttttaatg gttagtggaa
     6301 ggctaagttc tgaaatggta gctaaagcag ttatgcataa aattccagta cttgtttcac
     6361 gcacggctcc tacttgttta ggagttatga tagcaagaaa atttgattta acgctttgtg
     6421 gttttgctag agaaaataag attaatattt atagtggaga atttagaatt catggataaa
     6481 aatcaagaaa aagaaatcat ctcatatatg agagaattgt taaatagtaa tgaaaaatta
     6541 gattgtggta cggcttttaa aattgcaaag aaatttaatg taaatataga aaaaatcgga
     6601 caattagccg atgaaaatca catgagaatt gataattgcg agttggggca atttggacat
     6661 ttagattttg aaaaagcaaa gattgaagta cttaaaaaaa tagaacctag tttagatgaa
     6721 aagcgtagaa ttttttgtaa agatgcaaga gatattgcta aagaaggttg tgggcttaaa
     6781 agtatgcgtt cagctttaaa agcttataag gttgatgtaa agtattgtca acttggttgt
     6841 tttaaagaaa aaaaaggtaa gcaatttata gtaagaacaa aaacttggat tgaaaatgcg
     6901 gatggagatt tgctttttgg acgaggaaaa acagaacttt tagaacttat cggacaaaca
     6961 ggtagtttat tgcatgcttc taaacttatg gggattaatt ataaaaaagc ttggatgcat
     7021 ttacaaacct tacaaaaaaa ttctcaagaa atcttagtta gcacaagaca aggacgctct
     7081 aaagaatcag gaactaaact tactcctaga gctttggaat taatggaaaa ttactctatt
     7141 ttacaaaaag atatagaaga atacgctaat aaacgcttta aagaactgtt tttaaaagga
     7201 aaaaaataaa tcttctatca aaaaatacta at
//
LOCUS       DARBAC010000084         7113 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.084, whole genome shotgun sequence.
ACCESSION   DARBAC010000084 DARBAC010000000
VERSION     DARBAC010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7113
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.084"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            86..892
                     /gene="cdtA"
                     /locus_tag="SB799_001343"
     CDS             86..892
                     /gene="cdtA"
                     /locus_tag="SB799_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HEG0868577.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQEIPSLISGADLVPITPITPPLTRTSNSANNNAVNGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLINSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIVHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            889..1686
                     /gene="cdtB"
                     /locus_tag="SB799_001344"
     CDS             889..1686
                     /gene="cdtB"
                     /locus_tag="SB799_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HEG0868578.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRTQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            1697..2266
                     /gene="cdtC"
                     /locus_tag="SB799_001345"
     CDS             1697..2266
                     /gene="cdtC"
                     /locus_tag="SB799_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HEG0868579.1"
                     /translation="MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPNFFAEVNELMIITPPLTAATPLE"
     gene            2438..4120
                     /locus_tag="SB799_001346"
     CDS             2438..4120
                     /locus_tag="SB799_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEG0868580.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGVKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTIFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIICIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSVTGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWATLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIVLIGIWTCIIAFFLQGIIPEVIVK"
     gene            4240..4980
                     /locus_tag="SB799_001347"
     CDS             4240..4980
                     /locus_tag="SB799_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEG0868581.1"
                     /translation="MMKKVYFYATCLGTAAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKV
                     KDFSSRVIELSQYLDEVLKVDYEDKGAPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGERL"
     gene            4977..6416
                     /locus_tag="SB799_001348"
     CDS             4977..6416
                     /locus_tag="SB799_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEG0868582.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANKVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWAVQNFANVLPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            6409..7065
                     /locus_tag="SB799_001349"
     CDS             6409..7065
                     /locus_tag="SB799_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEG0868583.1"
                     /translation="MSKIDEISSKSKASILEHLKKAYKETDFTRIESIDPVEHIQTTQ
                     DMLTEMKQKMSDNKYIVENATKDTLEEKINEIVAKYGFKSMIYGADLNLDLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCVVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
BASE COUNT         2401 a         1087 c         1263 g         2362 t
ORIGIN      
        1 ataaaacatt tttaaaaagc gaaaaattat aatgaaattt atgttattat tttcttaaaa
       61 atttaaatac atatcaaggt ttttaatgca aaaaattata gtttttattt tatgttgttt
      121 tatgactttt tttctttatg catgttcttc taaatttgaa aatgtaaatc ctttggggcg
      181 ttcatttgga gaatttgaag atactgatcc tttaaaacta ggacttgaac ctacttttcc
      241 taccaatcaa gaaattccaa gtttaattag cggtgctgat ttagtaccta ttactcctat
      301 taccccacct ttaactagaa caagcaatag tgccaacaat aatgcagtaa atgggatcaa
      361 tcctcgcttt aaagacgaag cttttaatga tgttttaatt tttgaaaatc gccctgcggt
      421 ttctgatttt ttaaccattt taggccctag cggagcagct ttaacggttt gggctttagc
      481 acaaggaaat tggatttggg gctatacttt aatcaatagt aaaggatttg gcgatgctag
      541 agtttggcaa cttttgcttt atcctaatga ttttgcaatg attaaaaatg ccaaaaccaa
      601 tacttgtctt aatgcttatg gtaatggaat tgtccattat ccttgcgatg caagcaatca
      661 cgcacaaatg tggaaactta tccctatgag caatacagcg gttcaaatta aaaatttagg
      721 aaatggaaaa tgcatacaag cacctattac aaatctttat ggtgattttc acaaggtttt
      781 taaaattttt accgtagagt gtgcaaaaaa agataatttt gatcaacaat ggtttttaac
      841 cactccgcct tttaccgcaa aacctttata tcgccaagga gaggtacgat gaaaaaaatt
      901 atatgtttat ttttatcttt taaccttgct tttgcaaatt tagaaaattt taatgttggc
      961 acttggaatt tgcaaggctc atccgcagcc acagaaagca aatggagtgt tagcgtaaga
     1021 caacttgtaa gtggagcaaa ccccttagat atcttaatga tacaagaagc aggaacttta
     1081 ccaagaacag ccactccaac aggacgccat gtgcaacaag gtggaacacc tattgatgaa
     1141 tatgagtgga atttgggaac tctttcaagg cctgataggg tttttattta ttattctcgc
     1201 gttgatgtag gagctaatcg tgtaaattta gctatagttt caagaacgca agctgaagaa
     1261 gtgattgttt tacctccacc tactacagtt tcaagaccta ttataggaat tcgcaatgga
     1321 aatgatgctt ttttcaatat ccatgcttta gccaatggag gaacagatgt aggagcaatt
     1381 atcacagctg tagatgcaca ttttgcaaat atgcctcaag ttaactggat gatagcaggg
     1441 gattttaacc gtgatccttc tactataaca agtacagtgg atagagaatt agcaaataga
     1501 attagagtgg tttttccaac tagtgcaact caagcaagcg gagggactct tgattatgca
     1561 attacaggaa attcaaacag acaacaaacc tatactccac cgcttttagc tgcgatttta
     1621 atgcttgcaa gtttaagatc tcatatagtt tcggatcatt ttccagtaaa ttttagaaaa
     1681 ttttaggaca tttaatatga aaaaaattat tactttgttt tttatgttta taactttagc
     1741 ctttgcaact cctactggag atttgaaaga ttttaccgaa atggtttcta taagaagctt
     1801 agaaacggga atttttttaa gcgcctttag ggatacctca aaagatccta ttgatcaaaa
     1861 ttggaatatt aaagaaattg ttttaagcga cgagttaaaa caaaaagata aattagctga
     1921 tgaacttcct tttggttatg tgcaatttac aaatccaaag gaaagcgatc tttgtttggc
     1981 tatcttagaa gatggaacct ttggagcaaa atcttgtcaa gatgatctaa aagatggtaa
     2041 attagaaact gtattttcta taatgccaac aacaacttca gctgtgcaaa ttcgttcttt
     2101 agttttggaa tctgatgaat gtatagtaac tttttttaat ccaaatattc ctatacaaaa
     2161 acgctttgga atagcccctt gcaccctaga tcctaatttt tttgctgaag taaatgaact
     2221 aatgattata accccacctt taacagctgc taccccttta gaataagatt tttatcttgt
     2281 tctattttta tatttattta atatttatga tattactaaa atacacaaaa taattaataa
     2341 caatacaatg taatttactt tgctctataa tttttttatt ttaatttaat tttttgttac
     2401 aataaattta tacataataa ttatcaagga ggaaaaattg gaacaaattt taacatggca
     2461 acaaatttat gacccttttt caaacatttg gctaagtgct ttagtagcat ttttacctat
     2521 actatgtttt ttagtttgtt tggttgtttt aaaacttaaa ggctatcaag caggtttttt
     2581 aactgttata cttgctactt tggtagcttt atttgcctat aaaatgcctt ggaatttggt
     2641 gggtgcaagt tttattcaag gctttacaaa tggtatgtgg cctatagctt ggattatcat
     2701 cgcggcaatc tttctttaca aactttctat caagtcaggt tcttttgaaa tcattaaaaa
     2761 aagcgtgatg agtattactc cagatcatag aattcaagtg attttaatag gtttttgttt
     2821 tggttcattt ttagagggtg ctataggttt tggtggtcct gtggctataa ctgctgcact
     2881 tttagtagga cttggcttgc gtcctttgca agctgcaggg ctttgtctta tcgcaaatac
     2941 tgctcctgtt gcttttggtg cggtgggaat tcctattatt gctatggcaa atcttgttgg
     3001 catagaacag cattcagttt ctgccatggt aggtagaatg ctagttcctt taagccttac
     3061 tatacctttt ttcatagttt ttttaatgga tggatttaaa ggcgttaaag aaacttttcc
     3121 agctatttta gttgcggcgc taagttttac aactactcaa tttttaagct caaatcactt
     3181 aggagcggaa ttgcctgata ttatttcagc tgtggtttct ttagcggtta caactatatt
     3241 tttaaaattt tggaaaccaa aaaatatttt tagatttgat aatgaaagca atttcactca
     3301 agataacacc ctaagtttta atcaaatttt aaaagcttgg tcacctttta ttttactcat
     3361 tatttgtatt atcatttgga cacaaccttg gtttaaagct ctttttgata aagatggtat
     3421 tttaagttat acaagcatta ctttacaatt tagtaatatc acaactggaa ttttaagtcc
     3481 ttcagttact ggcataggag aagctaagcc tttatctttg gccttgggtg tagatttaat
     3541 caatggaaaa accgtagctc aagcaggaac agcaatttta cttgccgctt ttctaactat
     3601 agctatttta aaaatcaaag ccgaagatgc tgcagaatgc ttttgggcta ctttaaaaga
     3661 aatggccata ccttgtatca ctataggttt agttgtggct tttgctttca tttctaaaaa
     3721 tagcggtatg agcactacct tagggcttgc ttttgcacac acaggcgatg ctttttcttt
     3781 cttttcacca atcattggtt ggataggggt atttttaaca ggctctgata caagtgctaa
     3841 tttacttttt ggaaccttgc aacaagtaag cgctcaaaaa ctaggtatta gtgaagcttt
     3901 atttttagca gctaattcag taggtggagt cgttggaaag atgatcagtc cgcaaagcat
     3961 tgctatagct tgcgcggcgg ttggacttgt aggaaaagaa tctgatcttt tcaaattcac
     4021 attaaaatat tctgtagctt ttattgtttt aataggaatt tggacttgca ttatagcttt
     4081 tttcttacaa ggaatcatcc ctgaagttat agtgaaataa ttaaaaattt aagttttatt
     4141 tcaacaaata ttcgttttta gaatatttgt tggaaatttt actttgcttt tatttttaca
     4201 ggattagaat atttatccta aattatccca aaaggagaga tgatgaaaaa ggtgtatttt
     4261 tacgccacat gcttaggaac tgctgctatg caacaaagcg ttttaaatgc aataaaactt
     4321 ttaaggcgtg aaggtattga agtgattttt aaaaaaaatc aaacctgttg tgctcaacct
     4381 tcttttaact caggttattt cgatgaaagt cgtgagattg ctttatataa tgtagattta
     4441 tttgataaag attatcccat cgttgtgcca agtggttctt gtgcgggtat gatgagtcat
     4501 gactataaag aactttttaa aaacagacct gaattttcta aagtcaaaga ttttagctct
     4561 agggttatag aactttcaca ataccttgat gaagttttaa aagtagatta tgaagataaa
     4621 ggtgcaccta taaaagtaac ttggcattct aattgccatg ctttaagagt gcaaaaaagc
     4681 atacaagcaa gcaagaatct tatcaaaaaa ctaaaaaatg tagaattagt agaacttcaa
     4741 tacgaagaag aatgttgtgg ttttggcgga actttttcag taaaagagcc tgaaatttca
     4801 aatgctatgg taagaagtaa aattaaagat atacaaaata gcggtgcaaa atatctcatc
     4861 agtggcgatg gaggttgtct tttaaatata gatggtacca tgaaaagaat gggtttagat
     4921 ataaaaggca tacatttata tgacttttta cttaaacgct tagaaggaga aagactatga
     4981 gtcaaaaaat tcctcacgaa caaatcgttc aaattaaact caatgacaag caaatgcaag
     5041 aaaatttaat gactgccatg catactttac aaaaaaatag actcaatgtt attgatgcta
     5101 gatttaaaga ctggcagggt ttaagagcta aagctaaaca agctaaaaac aatgccttaa
     5161 tgagtttaga agaaaggctt ttagaatttg aaaaaaatgc tacaaaaaat ggcattaaag
     5221 tgcattgggc aagtagtgat gaagatgcct gtgaaatcgt ctatgaaatc atgaaagaaa
     5281 aaaatattac caagctttta aaaggtaaat ctatggcaag cgaagaaata ggcctaaatc
     5341 actacctaga aaaaaaaggt ttaaaagcta tagaaaccga tcttggagag cttattttac
     5401 agcttaatga agagcctcct ttacatatag ttgtacctgc tatacataga aaccgccatg
     5461 aaatcggaga aattttcaaa gaaaaattag gagcaaattt agaaaacgat gaacctgaaa
     5521 gtttaaatgc ggtagctaga gaacatttaa gaaaagattt tgaaggctta aaacttggac
     5581 ttagtggggt caattttgcc atgtcaagag aaggagcttt ttggcttata gaaaatgaag
     5641 gaaacggtag aatgtgcact acagcacctg atattcatat cgcactttgt ggcatagaaa
     5701 aagtcatgga aagctttgaa gatgcggcta ctatggtttc tttactcact ccttcagcca
     5761 caggacaatt tataccaact tataacaata tcattacagg ccctagaaaa aatggggatt
     5821 tagatggccc taaagaagta catgtgattt tatttgatca caatcgttct aaaatgctag
     5881 ctcatgagga ttattacgaa gctttgcgtt gtattcgatg cggggcttgt atgaattttt
     5941 gccctgttta tgatcaaatc ggcggacatg cctatcaaac cacttatcca ggacctatag
     6001 gagaagtaat cagtcctaat atttttggca tagatcatac aggagatatt ttgaatttct
     6061 gttcactttg tgggcgttgt tctgaagttt gtccagtgca aattcctttg gctgatctta
     6121 ttcgcaaatt aagatgcgat aaaataggac aaggtaaaaa tccaccttta ggagcaaaca
     6181 aagttcatca caatgcccta gaagcctttg cttttaaaca atttaaaaat atcgcaacca
     6241 atggcgataa atggcgtttt tcactttcaa aagcacatta tttcaactgg gcagtgcaaa
     6301 atttcgcaaa cgttttgcct gtgattaaaa aatggtacgc ttttaaagaa ttacctcaaa
     6361 ttaaaatgga tctttataaa gaagtgcaaa aactagaagg agtaagctat gagtaaaatc
     6421 gatgaaattt caagcaaaag taaagcaagt attttagaac atcttaaaaa agcttacaaa
     6481 gaaacagact ttacgcgtat tgaaagtata gatcctgtag aacatatcca aaccacccaa
     6541 gatatgctta cagaaatgaa gcaaaaaatg agcgataaca aatacatcgt tgaaaatgct
     6601 acaaaagata ccttagaaga aaaaatcaat gaaattgtcg caaaatatgg ctttaaaagt
     6661 atgatttatg gggcggattt aaatttagat ttagaacaga tcaaggcaga aaagaagatt
     6721 tgctttgata aagaaatcga aaatctaaga tctgaagttt ttcatagtga tttttccatc
     6781 attcacgcaa gagcaggggt aagctctcat ggagttgcac ttataccttc aagtaaaacc
     6841 caacctagaa tgctaagcct tgcacctaaa ctttgcgtag tattacttaa aaaagaaaat
     6901 gttgttaaaa gtcttagcga agctttaaat ttagtaaaaa aagaaaatga aattttacct
     6961 actaatatct tatttatagc agggccttca agaacagcag atatagaact tatcactgtt
     7021 tttggtgttc atgggccaca aattgcacat attattattt actgattcta tactagaatc
     7081 agtaagtctt aatttttaat attaattata tat
//
LOCUS       DARBAC010000085         7061 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.085, whole genome shotgun sequence.
ACCESSION   DARBAC010000085 DARBAC010000000
VERSION     DARBAC010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7061
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.085"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..217)
                     /locus_tag="SB799_001350"
     CDS             complement(<1..217)
                     /locus_tag="SB799_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868584.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLK"
     gene            complement(201..1247)
                     /locus_tag="SB799_001351"
     CDS             complement(201..1247)
                     /locus_tag="SB799_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HEG0868585.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKNVRFYNSNYGKEINENFNS
                     IIGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNIKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDD
                     TLSNLISYFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNYIKAQIIDLI
                     KSKELKKENNESKQ"
     gene            complement(1256..3430)
                     /gene="flhA"
                     /locus_tag="SB799_001352"
     CDS             complement(1256..3430)
                     /gene="flhA"
                     /locus_tag="SB799_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEG0868586.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAAASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKIKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            complement(3417..3827)
                     /locus_tag="SB799_001353"
     CDS             complement(3417..3827)
                     /locus_tag="SB799_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HEG0868587.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            4002..4274
                     /gene="rpsO"
                     /locus_tag="SB799_001354"
     CDS             4002..4274
                     /gene="rpsO"
                     /locus_tag="SB799_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEG0868588.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            complement(4356..6974)
                     /locus_tag="SB799_001355"
     CDS             complement(4356..6974)
                     /locus_tag="SB799_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEG0868589.1"
                     /translation="MLEIVYGFFSIILGHTGSGIFALLLLLFSLILLFPKFAKEILKI
                     ELDFTYLLKVEQAFKSLLMRVFGGENEKEDIGKSEPMVPKLNILQDNIYENSQINEKE
                     KTNNLEQIIKDSNINASKNSITTAKENFEKLKNQILDETIEIDKQSLKESRSFVYEHS
                     QQVRNFAQKASKMSISLDEDFNFISEEEVDMIPERFLKPKKLEDIKQIDTNKNLDEPS
                     YKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQNEILENKVKQEIKK
                     LEEYDAINSSDIIEGNKYSFNSPKTIKTETEESNKINENKNPDKTDNIFEFAPIVEEL
                     NHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKIDDKKTNDQEIKLQKAVLAKEIAIN
                     QALLREIEQGEVEKPKDFTLPPLDFLANPKEHRQEINESEIDKKIYNLLEKLRRFKIG
                     GDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAKSIRIQAPIPGKDVVGI
                     EVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFVTDLKKLPHLLIAGTTG
                     SGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIPHLLTPVITDPKKAVNA
                     LSNMVAEMERRYRLMADAKTKNIENYNEKMKELGEEELPFIVVIIDELADLMMTAGKD
                     VEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYKVGQKIDSKVILD
                     AMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDFLKDQQSVEYDESFLKD
                     QQSAGVTTNESFDGEVDELYEEAKRVILEDGKTSISYLQRRLKIGYNRSANIIEQLTQ
                     NGVLSEPDAKGQREIL"
BASE COUNT         2306 a         1218 c          912 g         2625 t
ORIGIN      
        1 tttttagaaa ttccacaact tctaaaattt catcaacccc ttctttgttg gaattttcga
       61 gcacattatc tatattatca atataagctt ctattgcatt ttctaatttt tctcttttaa
      121 ctccagcgta taaaagcata gcttctaaaa ctatgctaag ctcatattgt aaatcttcta
      181 gttcattttt taaggtttta ttattgtttt gattcattgt tttccttttt aagttctttg
      241 cttttaatta aatcaataat ttgagcctta atataattat aatttgcccc atctttaaat
      301 gtcgcaaaaa gtccaccact agcattttta tgtccaccgc cacctactaa atttttagcc
      361 attaaactta catctatttt tccatttgca cgaaaactta aggtttttct agaactaaca
      421 tcaataaaaa agtcataatc aggatttttt actaaaaaat catttccaat aacagaagta
      481 ttgcctatat ttgaagttaa gatgccttta tggccttcat attctatact gaaattttct
      541 tttagctcac ttagtttttc aactacaaaa taagaaatta aattagaaag agtatcatca
      601 ttttttctgg caaaataatc cttttttata aaatgagtag cattatcgag taaaatattt
      661 gcattttctt ttcctataaa tttccaagcc ttatcaagca agaaaaacat ataatcgatt
      721 tgagattctt taaacatcac acgatttatt tcttttgcat tggcaatcaa gcctaaaaaa
      781 acctttccaa gttcaaaatt ttcatcctcg cttagccaaa tatcaacagc attaaccaca
      841 tcaacaaatt ttgaaagctc taaaacaggg gtgcagattt tagagaaaaa atcataaacg
      901 attttagttg cacatctttt agaatcaagt aaataccaag aatatttttg agcacattct
      961 tcgccacttt gatgatgatc aagaagaaaa attttaatat ttttctcttt gcaaattttt
     1021 tcaaattctt cacattgatt taaatttaaa tttaaatctg ttattagaat aatagctttt
     1081 ccgaaatttt catctttttc tatatcgcct ataatagagt taaaattttc attaatttct
     1141 ttaccataat tagaattata aaatctcaca tttttaaaat aaaaatttac tataaattga
     1201 caagcataac catcaagatc tgtatgcgaa agatgataaa ttttcattat attccttaaa
     1261 gttctatcct aataataccc tcggtattaa aatttgtatt ttctgcaatt tctgcaaaac
     1321 ttaacactac tatattaatg ctaaaattat aacaaatatc agcaatgaat tttctaagct
     1381 gcggttcaac gcaaagtata aaaggcttga tacgaccatt tgctaccgcg gcaacttcag
     1441 cccttagagt atctactaaa gtgcctgttt gagctacact taaaggcaag tgataacttc
     1501 catctctaaa ttgtacattt tccattaaaa ctgcagagct agcagagtct aagataaaaa
     1561 tatccaaatt tcctttatca tctaaataca tatttgtaat catcctagct aaagacgctc
     1621 ttacatgttc aataatcata tcaaaactct tgcttacttc tgctatatcg cttacagatt
     1681 ctaaaatagt aagcatatct ttaattggta tgtgatgctt aagcaagtct ttgagaattt
     1741 tttgaataag acttacaggt gcaacaccta aagcaccttc tacgatgatt ggataatcat
     1801 ttttaatctt atcaagaaga ttttgcacct cttggcgtgt aagaagttcg cttgcatgtg
     1861 ctttgataag ttcgctcata tgtgttgaaa taacacttgc aggatctatt actatatagc
     1921 catttaatgt tgcttcatct tttaaattcg catcaatcca aagtgcatca gagttaaaag
     1981 cgggttcttt tgtagcaatc ccttctatct cttctgtgat aaaaccacta tccatggcta
     2041 aatatttatc cggataaatt tcggcacttg ctatagacac gcccttgagt ttaaaactat
     2101 actcatttgg tttaagtctt aaattatctc ttattcttat ttttggcatt aaaaatccta
     2161 aactttcagc aatacttctt ctcattgagc gaatcctttc tgtaagttcg ttttcagcaa
     2221 gcttaataag tccgtatcca agttcaagtt ctaaaatttc aactttaagt atgtcgttaa
     2281 tcttgtgttc ttcttctttg agaatttctt cttcgctttt cttagcaggc gctgccgttg
     2341 tcccacctgc tccactttga gatgcagctg cagcacttgg tttgcttttt ttaactgtag
     2401 ttatatcaat tttaccttcc ttaacctgct tggtaagata gccaagactt aaaaaaacta
     2461 aagccataaa gcccaaggat aaagttggta agccaggtac taacgcaaag ataaaaagta
     2521 caaaacctac tattaaaagc gtgcgatatt cgcttaaaag ttgagttaaa gttccttctg
     2581 caaaattttc ctcatctttg cttgcacgag tgataattat agcggttgca gtagaagtaa
     2641 taagccctgg aatttgcgat acaagtccat cacctatggt taaaatagta taagtagaag
     2701 cagcatcgct taaagccata tcgtgctgaa aagatcctat taaaaaacca cctatgatat
     2761 ttataatagt tatgataatt cctgcaacag catctccttt gataaattta gaagaaccat
     2821 ccattgcgcc atagaagttt gcttcagcaa taacttcttg acgtcttgct ctagcggttt
     2881 gttcatcaat aagccctgca tttaaatccg catcaatagc catttgttta cctggcatcg
     2941 catcaagtgt gaatcttgct tgtacttcag aaacccttgt actacctttt gttacaacca
     3001 tgaaattaat caatactaag atacaaaata caatcacacc aatgaccata tttccaccaa
     3061 caacaaattc tccaaatgct gctataatct cactcacggc ttcagggccg ttttgccctt
     3121 cgcttaaaat catccttgta gtagctatat ttaatgaaag tctaaataaa gtaataatca
     3181 agattaaagt tggaaaagtt gttaaatctg tcggtttggg tatataaata gaaattaaaa
     3241 taattaatac cgataaagct atgcttaaag ctaagaaaaa gtccaaaata ggacttggta
     3301 aaggaactat aataatagct aaaatacaaa ctaaaaaacc aacaatagtt aagcttttag
     3361 cttttaaaac aggagcaatt aaaggcccca agaaaggaaa aactaaatcg actattttat
     3421 tttttgccat tatttttcat aatatcttct aaagtaatag aatctaaaaa ttcatctact
     3481 ttattttgta aatttactaa cataggcatt aaggtgcaat tttcttcttt attatttgga
     3541 caagtgccac cactgcattc aaatacactg atatcctttt tttcggcact attaacaatt
     3601 tcttttatag tatattgact tggttctttg attaaaacaa aaccaccttt tgccccttta
     3661 aaggatttta acaagccatc tttagctaaa gtttgtaaaa ttttagctaa aaaactttta
     3721 ggaatatcaa gctctaaagc taaagaatct acatcttgag gtgtttcttt ttgagaaata
     3781 taaattaaag aaagtaaagc gtattcgcta gctttggtaa atagcacaga ttctccttat
     3841 tataactaca gaaatagctg taattataat aaataattct tagaaaaaga cttaaatttt
     3901 gacaaaacct tctaaaaaag ataaattcag tttatttttt gctttttaag gtaaaattat
     3961 agttctttaa ttttattatt ttaccaatca ggaggtctat catggctttg gattcggcca
     4021 aaaaagcaga aatagttgcg aaattcgcta aaaaaccagg tgatactggt tcaacagaag
     4081 ttcaagtggc tcttttaact gcaagaattg cagaacttac agaacattta aaaatctaca
     4141 aaaaagactt ttcatcaaga ttaggacttt taaaacttgt aggtcaaaga aaaagacttt
     4201 tatcttatct taaaagaaaa gattataatt cttatagtaa gttaattacc gaattaaatc
     4261 ttagagataa ataattttaa gcccttttta ctgggctttt atctttataa attcttcttt
     4321 atgtaattag tttttatatc aaaataaaaa aaatcttata aaatttccct ttgtcctttg
     4381 gcatcaggtt cgcttaaaac tccattttga gtaagttgtt caataatatt tgcagagcgg
     4441 ttatagccga tttttaaacg gcgttgcaaa taagaaatgc ttgtttttcc atcttctaag
     4501 attactcttt tagcttcttc ataaagctca tctacttccc catcaaagct ttcatttgtt
     4561 gtaacacccg cgctttgctg atcttttaag aagctttcat catattctac gctttgttga
     4621 tcttttagaa aatccacgat tttttctatt tcaaattcac tcgcaaaagg tgcatgcaaa
     4681 cgcactatag aacttgttcc aggaggagta aataaacaat ctcctcttcc aagtaaactc
     4741 tcagcaccca tagcatctaa gataacctta gagtcaattt tttgccctac tttataagaa
     4801 attctacttg gcaaattcgc tttaattagt cctgttacaa catcaacaga aggccgttgt
     4861 gtggctacaa tcaagtgaat tccacttgct cttgccattt gagcaagtct tcctatataa
     4921 aattctacat ctttacccgc agtcatcatt aaatcagcaa gttcatcgat aattactaca
     4981 ataaaaggaa gttcttcttc acctaattct ttcatttttt cattgtaatt ttctatattt
     5041 ttggtttttg catcagccat taaacgatag cgtctttcca tttcggctac catatttgaa
     5101 agtgcattga ctgctttttt tggatctgtg ataacaggag ttaaaagatg aggaatgtca
     5161 ttataaatgc taaattcaag catcttagga tctatcatca tcaaacgcaa ggttttagga
     5221 gagttgcgat ataaaagact taaaagcata gaatttatcc ccacactttt accactacct
     5281 gtagttcctg caataagcaa atgcggaagt tttttaagat cggttacaaa agcattacct
     5341 actatatctt tacctaaagc tatggttaaa gggcttttag catttttaaa aacttcactt
     5401 tgtaaaattt cccttagata aatggtttga atttcatcat ttggaacttc tatgcctaca
     5461 acatcttttc ctggtattgg agcttgaata cggattgatt ttgccattaa agccatagtt
     5521 aaatcatctt gtaaatttaa aatacgactt acttttacat ctgcactagg acgaaattca
     5581 aaagtagtta caacaggacc aacataagtg cttataacat caccgcctat tttaaaacga
     5641 cgcaactttt caagaagatt ataaattttt ttatctattt cactttcatt gatttcttgt
     5701 ctatgttctt ttggattagc taaaaaatct aatggcggca aggtaaaatc ttttggtttt
     5761 tctacttcgc cctgctctat ttcacgcaat aaagcttggt taatagcaat ttctttggct
     5821 aaaactgctt tttgaagttt aatttcttga tcatttgttt ttttatcatc aattttagtt
     5881 tctgtatttt ggataaaatc gagtgtattt ttttcttcta taactatttc atttatattt
     5941 tttataggag taggttctat ataaggatga tttaactctt ctacaatggg agcaaattca
     6001 aagatattgt ctgttttatc tggattttta ttttcattta ttttgtttga ttcttctgtt
     6061 tctgttttaa ttgtttttgg gctattaaaa ctatatttat tcccttctat aatatcgctt
     6121 gaatttatcg catcatattc ttctaatttt ttaatttctt gttttacttt attttctaaa
     6181 atttcatttt gataggcttt gtattcttgt tctagttttt ctttttttat caaattctct
     6241 ctaagttcaa gctcttttgt aaaaattttt ggtttaactt cttgtttaga aactggaatt
     6301 tcaatatttt tacgcttata acttggctca tctaaatttt tatttgtatc tatttgcttt
     6361 atatcttcaa gttttttagg ttttaaaaaa cgttcaggaa tcatatctac ctcttcttct
     6421 gaaataaaat taaaatcttc atcaagacta atgctcattt tactagcttt ttgtgcgaaa
     6481 tttcgcactt gttgagaatg ctcataaaca aaacttctcg attcttttaa gctttgttta
     6541 tcaatctcta tggtttcatc taaaatttga ttttttagtt tttcaaagtt ttccttagct
     6601 gtggtaattg aatttttact tgcgttgata ttgctatctt taattatctg ttctaagtta
     6661 ttggtttttt ctttttcatt tatttgtgaa ttttcgtata tattatcttg taaaatattt
     6721 aattttggca ccataggttc tgatttgcct atatcttctt tctcgttttc tccaccaaat
     6781 acacgcataa gtaaagattt aaaagcttgc tctactttta ataaataagt aaaatctaat
     6841 tctattttta aaatttcttt tgcaaatttt ggaaacaata agatcaaaga aaatagtaaa
     6901 agcaaaagag cgaaaattcc actccctgta tgccctaaga ttatagaaaa aaatccatat
     6961 acaatttcta aaatataccc aaaccctcta taaaagacag aaaataaaag taaagtagaa
     7021 aaaaaggcta aagaaaaacc aaaaagttct ctacgcttaa a
//
LOCUS       DARBAC010000086         7027 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.086, whole genome shotgun sequence.
ACCESSION   DARBAC010000086 DARBAC010000000
VERSION     DARBAC010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7027
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.086"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..134
                     /locus_tag="SB799_001356"
     CDS             <1..134
                     /locus_tag="SB799_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="menaquinone via futalosine step 1"
                     /protein_id="HEG0868590.1"
                     /translation="KTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNLA"
     gene            complement(131..781)
                     /locus_tag="SB799_001357"
     CDS             complement(131..781)
                     /locus_tag="SB799_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEG0868591.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEKALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(792..2135)
                     /locus_tag="SB799_001358"
     CDS             complement(792..2135)
                     /locus_tag="SB799_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEG0868592.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGLIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            2276..2351
                     /locus_tag="SB799_001359"
     tRNA            2276..2351
                     /locus_tag="SB799_001359"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2309..2311,aa:Phe,seq:gaa)
     gene            complement(2459..2535)
                     /locus_tag="SB799_001360"
     tRNA            complement(2459..2535)
                     /locus_tag="SB799_001360"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2499..2501),aa:Ile,seq:cat)
     gene            complement(2589..3689)
                     /locus_tag="SB799_001361"
     CDS             complement(2589..3689)
                     /locus_tag="SB799_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEG0868593.1"
                     /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGIHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            3767..4735
                     /locus_tag="SB799_001362"
     CDS             3767..4735
                     /locus_tag="SB799_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0868594.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKLCNEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINIVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRHILGDSLYGYKGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFKQINLGENDEKISLGFLLEFFNSFA"
     gene            4680..5915
                     /locus_tag="SB799_001363"
     CDS             4680..5915
                     /locus_tag="SB799_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEG0868595.1"
                     /translation="MMKRFRLGFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     EPSQVVSSTSKALPPQVEHLSASTDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSTSEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAGLRSEPSSKVKAAQ"
     gene            5915..>7027
                     /gene="trmB"
                     /locus_tag="SB799_001364"
     CDS             5915..>7027
                     /gene="trmB"
                     /locus_tag="SB799_001364"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEG0868596.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSKLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKVQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLTQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYK
                     QDENLLLKVAFGAFNKPEHCYLHLDKTIDFVFKEPFK"
BASE COUNT         2656 a         1002 c         1119 g         2250 t
ORIGIN      
        1 ccaaaacaag ggatttagat ataaaagatg ttagatatta tttagatgaa gttatatatc
       61 ataaaatttc taccaaagaa aaaacagcct taaagcgttt tgtaaaggct tgtaaggctt
      121 taaatcttgc ttaatgttca aattctctaa gctctttaac tgttccaagg agtattacaa
      181 catctccact ataaactgtc gtggtttcta aatcaggtag tatttcccag tcgctattta
      241 attttttata agaaatcact ttcatatttt gtgctacatg ttttaaagaa tttcctgcta
      301 atttttcatc tatattgatc ttaatagctc gtatagtatt tgctgaaaga tcaaaaactt
      361 cataatcagc atctttagtt aaaaattctt ttactagtct tttagcactt tctttttcag
      421 gataaataac ctttgttgca cctaacttag aaagaatttg accatggata ttagaggttg
      481 ctttagcaat gatattttta acacctatat ctttaagcgc cataagagta aggattgatt
      541 tttcaacatt ttctcctatg ctaacaataa caacttcaac atcatgaaag cctgcttctt
      601 ttagggctga aatatttgta gaatctaaaa tataagcata gcttggagga ttttgtatac
      661 tttttaaagc tttctcatct ttatccgcaa cgataacagt atgacctcca gcaatgagtt
      721 catctgctac aactgagcca aattttccaa gtcctatgat tccataatta agatttttca
      781 cgattttacc tttataaatt aacctttcct tcagggaatt ttaaatgaat agctttgtct
      841 tgtttgaata ccgagagtaa aaaagcaaaa acacctatcc taccacttag catcataatg
      901 atgataatca ccttgctagg atcactaaac aaagcgcata aagataaagt tccaccattt
      961 cctactgaaa ttcctacagt tgcaaaagct gaagaagttt caaaaagcaa ggctataaaa
     1021 tcaaattttg actctagcaa ggaaagcaaa ataacagcta ttactatata aacagctgaa
     1081 cctacagcta taataaaagc tttagatata gtttctcttg gaatttcatg tccaaaaatt
     1141 ctaactcttc catcgcggat actccaataa gcatagagca ataaaaccat tacagttgtt
     1201 actttcatac ccccagctgt tccacctggt gcaccaccaa taaccataaa caatgatcca
     1261 aaaaataagc ttgcatcatg caaatgtccc atatctaagg tgttaaatcc tgctgtgcgg
     1321 taattaatag cgataaaata tgagcttaaa attttatcga aaaatgaaaa atgtcctata
     1381 gtttgaggat ttgagtattc aaaagcaaaa ataataagcg ttgaagagaa aataagaaaa
     1441 atacttgcaa caacaaccat ttttgtatgt aggcttaaat tttgcaattt ttttctttga
     1501 aaaaagtata attcaaccaa aacaaaatat ccaagccctc caataataat caaagaagtg
     1561 ataataagat taattgctat atcatgttta taagctataa gcccatgttc aaatatagta
     1621 aatccagaat tattaaaagc gctaatagaa tgaaaaattc caaaccataa agctttttta
     1681 aaattcattt caagggcaaa acgcatggta agaagtatag cacctatcaa ttctatagta
     1741 aaaatgaaca gcaaaacctt tttaaaaaat ttaaataaac catccattga tggataaaat
     1801 aaagactctt ttagtaaatt tcttgcacta aaaccaactt ttttgcgtat gagtatataa
     1861 acgaataaac ctatacccat atatcccaag cctccaattt gcaccaaagc taagataata
     1921 atttgccctg ctaaggtaaa atcaaccgca gtgttcttaa ctactaatcc tgtcatacta
     1981 acagcagatg tgcttgtaaa aaaggcatcc aaaaaatcaa taggagttgt atgtgcccag
     2041 cttgaatgta gtaataaagc cccaaacaat gcaataataa tataaccagc tagtaaaatt
     2101 ttaaaagttc gtctatctag tccaaattgt ttcaaaaaat ttccatttga taatgatcta
     2161 aagcgggtat tctatcttat taaaacttta agggaaataa aattttattt ttgtatttaa
     2221 acttaaatta aagaaaaaaa gatacaatta catttttaat ttatcaaatc attgtggttg
     2281 gatagctcag tcggtagagc agcagactga aaatctgcgt gtcggcagtt cgattctgcc
     2341 tctaaccacc actttatctt tcagaaaatc acatcacata cttttttata taagattgaa
     2401 atatttaaag aactaaaaat tattttttaa agaaagagtc tatagcttat atgtagaatg
     2461 gtggatttag caggactcga acctgcgacc aaccggttat gagccggttg ctctaaccaa
     2521 ctgagctata aatccgccta agttgaatta aaagataaaa ttatatctta ttaatgctta
     2581 aaaatatttt atttagcctt tatatccgtc caaaaatatc taaaagtgat taaatgctgt
     2641 aaaattccaa aaaaaatcat aaaaatagta aaagaacttc caccataact aaaaaaaggc
     2701 aaagggatcc caactactgg tgcaaaacct atagtcattg aaatatttac tgccgcataa
     2761 ataaaaataa ataatgcaac acaattaata gcaactctag caaaataatc atctttaagt
     2821 ttataattta aactaagtag atgaaaaata agtaaaatat aaaatataat taatgtcaat
     2881 cccccaataa atccaaatct ttctatcatg taagcgaaaa taaaatcact agttgaaata
     2941 ggtaaaaatt taaaatgagt ttgcgtagct tcatcttgag attttccggt taaaccacca
     3001 tttccaatag ctatcattga ttgggctact tgataacttg gtttttctga aataaaatca
     3061 tgaattcttt gcttttggta gggttttaaa agatgtgtat aaataatagg agagctaaca
     3121 cttatagcta taacaatact taaccaaatt ttataatgaa ttcccatgat aaaaagcact
     3181 ccaaaaccaa caagtagtaa aaccatagca cttcctaaat caggttcttt tgcaattagc
     3241 aaaaaaggca agatgatgta aaagctaagt ttgatgaatt gtttaagctt gtatccattt
     3301 tttggaggag gattttgata aataagatag gcaagcatta aaataaaact aggtttaaaa
     3361 atttcagaag gttgtatagt aaagtgagta aaaggaattt caagccatct tttagcacct
     3421 aatttttcaa ccccaaaaat atctacgctt agcaataaaa aaatattaat ccaataagca
     3481 acaggaataa tccaaataaa tttccttatg ggaaagaaga aaaaaaccat aaaagcaaac
     3541 aatcccacac aggcataaac aaactgtttt tctgctaaaa aaggattagc ttcaaagatt
     3601 aagaaaaatg aaataagaat tatgggtaaa aataaaatgg gttgcatata gtcaaaatga
     3661 gttaaaattc ttctatctaa tctaaacaaa atttgccttc agttggtaat ataaagctat
     3721 aattataaac taaaatttta aatttatcaa aacttctaag gaaaaaatgc aaactttttt
     3781 agtagatgaa aattcaaggc ttgatgtatt tttggctaaa aaattaaacc aaagtcgcaa
     3841 tcaagttgct ttacttatag aaaaagattg tgtacaggtt aatgataaaa ttcaagataa
     3901 aaattcattt aagcttaaaa atggtgatat tatttctatt gcaagtttaa agctttgcaa
     3961 tgagataaaa cctcagtttg aagtggattt tgatattgat gtgttatacg aagatgaaga
     4021 cttgcttgtt ttaaataaac cttcaaattt agtcgttcat ggagcaagta gcgttaaaaa
     4081 tgccactttg gtggattggt taatagaaaa aaaatatact ttatcaaatt taggaggaga
     4141 gataagagct ggtcttgtcc atagattaga taaagataca agcggagcta tactgatagc
     4201 gaaaaataat ttcacccatc aaaaattaag cgaacagctt gcagataaaa gcatgggaag
     4261 aatttacctt gcgttaattg atttgccact aaaagaagat aaaattatag tagaaaaatt
     4321 tttaatgcgt tcgccttcta atgctattaa aaaaatagcc atagataagg aaaataaatt
     4381 cagtaaaaac gcaaaatcag cttttataaa tatagtaaaa actgaaaatt taactttgat
     4441 ggctgctaag ctttttacag gaagaactca tcaaattaga gcgcatttgg ctagtttaaa
     4501 tcgccatatt ttaggtgata gtttgtatgg ttataagggt aagtatgatt gtaggataat
     4561 gttgcatgct tattttttgt attttatcca tccaaaaacc aaagagcaaa tttttgttaa
     4621 agcacctttg atggaagatt ttaaaaatat tatgtttaaa caaattaatt taggagagaa
     4681 tgatgaaaag atttcgcttg ggtttttact tgagtttttt aactcttttg cttagcgctt
     4741 gtagtgtttc gcaaatgaat tcgctagctt caagtaaaga gcctgctgta aatgaaagct
     4801 tgccaaaggt tgaaagttta aaaagtctta gcgatatgag taatattgct tttgaatggg
     4861 agcctttata taatgaaaat attaaaggat tttatttata tcgttctagt gatgaaaatc
     4921 ctgattttaa acttgtaggc actattaaag ataagtttca aactcattat gtagatacta
     4981 aattagagcc tggtactaag tatcgttata tgatgaaaag ctttaatgag caaggacaaa
     5041 tttcagaaga tggcaaggtt atagaagtga gcacagctcc aagacttgaa gctgttcctt
     5101 ttgttcaagc tgtgactaat ttgcctaatc gtattaaact tatttggcgt ccgcatcctg
     5161 attttagagt tgattcttat attattgaaa gaactaaagg tgatgataaa gaatttaaaa
     5221 aaattgcaga agtaaaaaat cgtttaaacg ctgaatacat cgatagtgat ttaaaaccta
     5281 atgaaaattc aagctataga atcattgctg tgagttttaa tgggataaag agtgaaccaa
     5341 gtcaagttgt aagttctaca agcaaggctt tgcctcctca agttgagcat ttaagtgcta
     5401 gcacagatgg ttctaataaa atcattttaa cttgggatgc tcctacatat gaagattttt
     5461 cttattataa agtttattct acaagctcaa gcttccttcc ttttagtgtt ttggcaaaga
     5521 ctgataaaaa ttcttatgag gatatagtag aaggagcagg taaaagcaag tattataaag
     5581 taacaatggt ggataaagat ggtcttgaaa gtcctatgcc aaaagatggt gtagaaggta
     5641 aaactttagg taaccctttg gctcctagta ttattttggc tcaaagcaca agcgaaggga
     5701 taaatttaga atggagcgat aatgatacta gagctgttga gtatgaagta agacgctatg
     5761 gcggggagca aaatgctgtt tttaaaggca ttaaagaaaa gcgattaaaa gatgtaaaag
     5821 ctttaccagg ggtggaatat agttatgaag ttattgctat tgattcggct gggcttcgtt
     5881 cagaaccttc aagcaaagtt aaggcagctc agtagtgcca aattttaaaa gcaaaaagat
     5941 caaagaaata aatctacctt atagcaagga tgatgttgaa tttctttggc ttgctaagaa
     6001 tgataatgtt agtcttattt atacaaaggt tcaagaagag agtttctttc tgcagattaa
     6061 aaaagcacaa aatggttttg tgattaaagg cgataaacat acaaaacctt ctaaaatagg
     6121 ttatttgcaa aaggctttaa aaatctttaa agaaggtttt tgtgaggata ttatcaatga
     6181 agcttttgga cttaaaaaca atgctttaat tgaaaaaaca ccatttatcg ttgataattt
     6241 tgatgagctt ttgtctaagc ttcaaggtaa aatttatata gaaataggct ttggatcagg
     6301 aagacatttg ctttatcaag caaaagaaaa tccaaatgtt ttaattttag gggtggaaat
     6361 ttacaaccca gctttaactc aagtagctaa acttgctaaa gtgcaaaatg taaataatat
     6421 tttgctaatc caaagtgatg cgagattgtt attgagtgta ttaaaatcaa aatcagttga
     6481 aaagattttt ctacattttc ctgttccttg ggataaaaag cctcataggc gagttattgg
     6541 gaaagatttt tgcaaagaat gtgctagggt tttaacccaa aatggtcgtt ttgagcttag
     6601 aacagatagt tttgagtatt ttaattttac tctagaacaa tttttgactt ttcctgctcc
     6661 aaaatttagt cttagaaaaa atgaaaattt agaaatttca agcaaatatg aagatagatg
     6721 gaaaaagcaa gaaaaaaata tatatgatct ttgggtgtgg aattttaacc aagagtgtaa
     6781 aaactatgag ttaaatgaat ttaatctctc atcggttgaa ttttctaaag aggatttgaa
     6841 aaaaatagag cagaatttta aaaatattac tataaaaaaa gatgattttt tcttgcattt
     6901 tgaaagcatc tataaacaag atgagaattt gcttttaaag gttgcttttg gagcttttaa
     6961 taagcctgaa cattgttatt tacatcttga taaaacgatt gattttgttt ttaaagaacc
     7021 atttaaa
//
LOCUS       DARBAC010000087         7001 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.087, whole genome shotgun sequence.
ACCESSION   DARBAC010000087 DARBAC010000000
VERSION     DARBAC010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7001
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.087"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..685
                     /locus_tag="SB799_001365"
     CDS             <1..685
                     /locus_tag="SB799_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF814 domain-containing protein"
                     /protein_id="HEG0868597.1"
                     /translation="NSLLLKALEYRKRADVLFANLSVLKDYEREFKLDDFEGKELEFK
                     LEFSPKQSANLYYKNAKKLEQKAKNLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEI
                     LLPKKNSKKNQDYKQEDLVANFYYNEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIP
                     SAHTLIVSNKQKISLDVIEFAARLCVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTN
                     FKSINITKD"
     gene            687..1025
                     /locus_tag="SB799_001366"
     CDS             687..1025
                     /locus_tag="SB799_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868598.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDNEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            1034..1759
                     /locus_tag="SB799_001367"
     CDS             1034..1759
                     /locus_tag="SB799_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEG0868599.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGIFVYSFWLSLLCSFFVAIFAVIGDLFESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVTFL"
     gene            1756..2826
                     /locus_tag="SB799_001368"
     CDS             1756..2826
                     /locus_tag="SB799_001368"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEG0868600.1"
                     /translation="MILFGSTGSIGINTLKLAALKNIRISALACGDNIALLNEQIARF
                     KPKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     KYKIKDLNQVSLKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLDIAKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            2828..4222
                     /locus_tag="SB799_001369"
     CDS             2828..4222
                     /locus_tag="SB799_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HEG0868601.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFANISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDR
                     ILLSLKNPRKVINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHGKDESGILV
                     HKKNMQTQYSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            4219..5226
                     /gene="tsaD"
                     /locus_tag="SB799_001370"
     CDS             4219..5226
                     /gene="tsaD"
                     /locus_tag="SB799_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEG0868602.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHIEALPKILKQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDMGILLVSGGHTMVLYLKDDANLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNIPLKHSKELAYSFSGLKNAVRL
                     EILKHENLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRS
                     RLQNLCQKYNANLKLAPLKFCSDNALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSR
                     I"
     gene            5227..5742
                     /locus_tag="SB799_001371"
     CDS             5227..5742
                     /locus_tag="SB799_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEG0868603.1"
                     /translation="MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGNFNGTKEVNFRVGDDKECLKLVF
                     INKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGGM"
     gene            5742..6992
                     /locus_tag="SB799_001372"
     CDS             5742..6992
                     /locus_tag="SB799_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002822030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HEG0868604.1"
                     /translation="MIVSKTYEIDSCDDVELDIKRESKLEFKLCFDDEKEIKALVFII
                     PGLGGDVDENYREHLAEFVAGEFNVAVVSVNYHCIGNRPQTGSSFFMDDIDKLILKTS
                     CEALNIQVNLDKLNSLEELSSTLKEVDHILEEQKNQKLINPNFKLSIHLSLQPTKNEY
                     QNFGVMQAQDLLNAALYLKAHAPFDTMGGGIPVIMIGSSHGGYLAHLAAKFAPWLING
                     VIDNSSYAKFLWRLIGFGKEIDFTKYYCFGTGIFFKHIHIYCSDKTFWTSNSSSNNFF
                     SIPRRMIRYILELNHIENQANYPKPYYVSYHSFYDKEIAPPDEKLELYKYLKQFDFDA
                     ELHMIKNPDQIDGKFIKSLDHGMGMSIKTLISKELPCILEKVLSESDSKKEWKNKSIS
                     YPCDGLVYRFSEKNNKINLDITET"
BASE COUNT         2522 a          914 c         1265 g         2300 t
ORIGIN      
        1 aaattcttta ctcttaaaag ctttagaata cagaaaaagg gctgatgtat tgtttgcaaa
       61 tttgagtgtt ttaaaagatt atgaaaggga atttaagctt gatgattttg aaggcaaaga
      121 gcttgaattt aagcttgaat ttagtcctaa gcaaagtgct aatttatatt ataaaaatgc
      181 caaaaaatta gaacaaaaag ctaaaaattt aaacatacaa aggcaaaatt taaaagaaaa
      241 gttagatttt accttgagtt tgaaagaatt attgcttcaa gctaagagtg agatagagct
      301 tgaaatttta ctacctaaaa aaaatagcaa aaaaaatcaa gattataaac aagaagatct
      361 tgtggcaaat ttttattaca atgagtttaa aatttgtgtg ggtaaaaatg aaaaaggcaa
      421 tgaattttta cttaaaaatg ctaaaaaaga tgatttgtgg cttcatgtaa gggatattcc
      481 tagcgcacat actttgattg tatcaaacaa gcaaaaaatc agcctcgatg tgatagaatt
      541 tgctgcaagg ctttgtgtaa gcttttctaa gttaaagaaa ggttcgtatt gggtcgatta
      601 taccttaaaa aattttgtta aggttcagca aaaggcgttt gtaaattata caaattttaa
      661 aagtattaat atcacaaagg attaaaatgc cagttagccc tttaggaaat atcaattata
      721 taaatcagaa tatggcttat ccagctacac aagcaagcaa tgagcttgca aaagaaggtt
      781 ttgcagctac gctaaatatg gctgaattta atgaaaaaga aaaaacttta aacaagcttg
      841 aaaaagtcaa tgagactcat gaaatcaaag aagagatcaa agaaaaagcc gaacaagaag
      901 aaaaaaagaa aaaacacaat caagaagcta aaaccagcga taatgagaaa aatgaagaag
      961 atgagtctaa agatccaaat tttaaagacg cacaaagcat tcatcgccta gatattagta
     1021 tataaggaaa aatatgttta atacaactag aattatttca gctcttgtga tgataggggc
     1081 tattattatt atcgcgttga ttgatcaatt ttttatcaat tttatcgttt ttgcggtttt
     1141 attgtattta tcttttagtg aagcaaaaaa actttttgct ttagaaaata tttctattat
     1201 ccctttggct atagctttta ttttgggaag tttatcgcat aaagctttgc tttttgggat
     1261 tttagctttg ttattagtcg ttggatattt ggtttataaa aaggcttcct taaaaccagc
     1321 tcttatttat atttatccta gtttgcctat tttagcactt tggcaagtgt atttagatca
     1381 gggtatgttt gcgctttttt ggcttatcat tatcgttgca gcttgcgata gtggggcgta
     1441 ttttatcgga aaacttatgg gtaaaactcc tttttctcca acaagtccaa acaaaacctt
     1501 agaaggtgtt ataggtggct tgatttgtgc gagtgttatt ggaactattt tgggaatttt
     1561 tgtttatagt ttttggcttt ctttactttg ttcgtttttt gtagcgattt ttgcagtgat
     1621 tggagatttg tttgagagtt attttaaaag agaagcaggt gtaaaagata gtggagatct
     1681 tatccctggt catgggggcg tgctcgatag aatcgatgca gtgatcattg ctgcttttgt
     1741 gatggttact tttttatgat actttttgga agcacgggca gcataggaat aaacactctt
     1801 aaacttgctg ctttaaaaaa cattcgtatt tctgctttag cttgtgggga taatatcgct
     1861 cttttaaatg aacaaatcgc aaggtttaaa cctaaatttg ttgccataaa agattcaaaa
     1921 aataagcatt tagttaaaca cgatagagtt tttatagggc aagaaggttt agagcaaatt
     1981 ttaacagaat gtcaagataa gcttttactc aatgccattg taggttttgc aggacttaaa
     2041 agcactttaa aggctaaaga gcttggcaaa aacatagctt tagctaacaa agaaagtctt
     2101 gtagtagctg ggagtttttt gaaaggcgct aaatttttac ccgttgatag tgagcatgca
     2161 gctttaaaat ttttactcga aggtaaaaaa aatatagcaa aactttatat cacagcaagc
     2221 ggcggagctt tttataagta taaaatcaaa gatttaaatc aagtcagtct caaagatgct
     2281 ttaaaacatc ctaattggaa catgggagca aagatcacta tagatagtgc gactatggca
     2341 aataagcttt ttgagattat agaggcttat catttatatg attttaaaga aattgatgct
     2401 ttaatagaac caagatcttt agtgcatgca atgtgtgaat ttaaaaatgg agctagcacg
     2461 gcgtattttt caaaagcaga tatgaaacta gctatttcag atgctatatt tgaaaaacaa
     2521 gatacgccta ttttagaggc tgttgatttt agtaaaatgc ctgctttaaa atttcatcca
     2581 atcagcacaa aaaaatatcc tatttttaag cttaaaaata catttttaaa agagccaaat
     2641 ttaggtgtta tcatcaatgc tgctaatgaa gttggtgttt ataatttttt agaaaataaa
     2701 agtggatttt tagacattgc taaatgcatt tttaaagccc ttgatcattt tggagtacct
     2761 aaaatttcaa gcatagaaga agtttttgag tatgatttta aaacaagaga gtatttaagg
     2821 agttaaaatg aaattttttt taacaatttt attttttata acaagcattt ttgctttaga
     2881 gctagacttt agcgtaggag aaaatggaaa aagtctagat gataataata cagttttaat
     2941 ttttggtgga attcaaggcg atgagcctgg tggatttcat gcggcaagtt tgcttttgag
     3001 tgattataat atcactaagg gtaagattat agtggctcca aatttagctt ttgatagcat
     3061 tatcaagcgt tctcgtggga ataatgggga tttaaaccgt aaatttgcaa acattagccc
     3121 aaaagatcct gattataaaa ccgttcaacg cattaaagag cttattttac ttcctgaagt
     3181 tagtatggtg atcaatcttc acgatggttg gggtttttat aaacccactt atatcgatgc
     3241 gatgcaaaat cctaagcgtt ggggaaattc aagcgtgatt gatacaagcg aaatcaatgc
     3301 aagcaaatac cctgatcttg aaaatatcgc cactcaaacc gtaaatagtg tcaattcttc
     3361 gcttgctgat ccaaagcatg cttatcatct taaaaacacc aaaacccaag agcttggcga
     3421 tacggaaatg cttaaagctt taacttattt tgtgatttca aatcacaaag ccgcttttgc
     3481 aaatgaagca agtaaaaatc tgcctgtaaa tttaagagct tattatcatc ttttggcaat
     3541 tgaaaattat ttaaaaactg caggaattga atttagcaga gatttcgaac tcactccgca
     3601 aggagttgat aaagccataa ataaagagct tgaagtaaaa ctttttgatg atagaatttt
     3661 actttcttta aaaaatccaa gaaaggttat caactatgtg ccttttccgg taaataaaga
     3721 gttaaattat aacacaagca atgaacttac ggctgttatc gcagaaggaa attcttttta
     3781 tatccagtat ggcaatcgtt ttcaaacaag attatatcct gagtatttag aatttagcga
     3841 tgcttttaat gaagtaactt ttcaagttga tggcaatgaa accacagttc cttttggaac
     3901 caaggtaaaa gtaaaagaga attttcttat tccaaagata gctaatgtgc gcgtaaatat
     3961 cataggtttt gatcatggaa aagatgaaag tggtatttta gttcataaaa aaaatatgca
     4021 aacacaatac tctttagaca tggcaggtaa aatttataga gtggaatttt atgagttaag
     4081 aggggcgaat ttgcaacaac ttttagaggc aaatatcaat agcaagttga tcaaaaacgc
     4141 taaaaatttg gatttaaata ctcttaaaat ggcaagatca aaagataaat tcttaggttc
     4201 tattttagtg gaatttgaat gaaaaatctt atcctagcta tagaaagttc ttgtgatgat
     4261 agttctatag ctatcattga taaaaatacc ttagaatgta aatttcataa aaaaatttcc
     4321 caagaattag atcatagcat ctatggggga gtggtacctg aacttgctgc aagacttcat
     4381 atcgaggctt tgccaaagat acttaagcaa tgcaaagagc attttaaaaa tctttgtgcc
     4441 atagctgtga caaatgaacc tgggcttagc gtttctttgc tcagtggaat ttctatggca
     4501 aaaaccttag caagtgctct aaatttaccc ttaatcccta taaatcatct taaaggtcat
     4561 atttatagtc tttttttaga agaaaaaatt tctttagata tgggaatttt acttgttagt
     4621 ggtgggcata ctatggtgct ttatcttaaa gatgatgcaa acttagagct tttagcaagt
     4681 acaaatgatg atagctttgg agaaagtttt gataaagtgg ctaaaatgat gaatttaggt
     4741 tatcctggtg gggtcatcat agaaaattta gcaaaaaacg ccaaacttaa aaatatctct
     4801 tttaacatac ctttaaagca ttctaaagaa ctcgcttata gtttttcagg acttaaaaat
     4861 gcagtgcgtt tggaaatttt aaagcatgaa aatttaagcg atgatataaa agcagaaata
     4921 gcttatgcct ttgaaaatac agcttgtgat catatcatgg ataaattaga aaaaattttt
     4981 aatctttata aatttaaaaa ttttggcgtt gtaggaggag ctagtgcaaa tcttaacttg
     5041 cgttcgcgtt tgcaaaattt atgtcaaaaa tataatgcaa atttaaaact agctccttta
     5101 aaattctgct ctgataatgc tttgatgata gcaagagctg cggttgatgc ttatgaaaaa
     5161 aaggaatttg taagcataga agaagatatt ttaagcccta aaaataaaaa tttttcaagg
     5221 atatagatga aaaaagcttt tactatatta gaacttgttt ttgtgattgt tattttagga
     5281 attttagccg ctattgcttt accaaaaatg agttcaagca aggatgaagc tgaagttagt
     5341 aagtctttaa acaaccttaa aactttgatt aatgatataa gcatttatac tttaaaaaat
     5401 gatcatttaa gctctataaa aacgatgagt aatgtaagtg gggttgaaaa tgtcgatctt
     5461 ggcaatttta atggcacaaa agaagtaaat tttcgcgtag gcgatgataa agaatgctta
     5521 aaacttgttt ttataaataa agctgatttt atactcatgg gaatttcaag caatgaagca
     5581 agtaaaaatg ctatcattaa cgcagccaat caaagccatg aagatttaga aaatatagac
     5641 tttacaagct cttctagtaa taaagcttgc gtgatcttaa gtaagaatga aaattttaaa
     5701 aacctagcga gtaaaactta tcttttaata gggggaatgt aatgatagtg agtaaaactt
     5761 atgagattga ctcttgtgat gatgtagaac ttgatataaa aagagaatca aagcttgaat
     5821 ttaagctttg ttttgatgat gaaaaagaaa taaaagcttt agtgtttatc atccctgggc
     5881 ttggtggaga tgtggatgaa aattaccgtg aacacttagc tgaatttgta gcaggcgaat
     5941 ttaatgtagc tgtagtaagt gtgaattatc attgtatagg taatcgcccg caaactggat
     6001 caagcttttt tatggatgat atagacaaac ttattttaaa aacaagttgt gaagctttaa
     6061 atatacaagt taatttagat aagttaaatt ctttagaaga attaagctca acactcaaag
     6121 aagttgatca catcttagaa gaacaaaaaa accaaaaatt aattaatcca aattttaaat
     6181 taagcattca tctaagtttg caaccaacaa aaaacgaata tcaaaatttt ggagtaatgc
     6241 aggcgcaaga tttgttaaat gcagctcttt atcttaaggc tcatgcacct tttgatacta
     6301 tggggggggg tatacccgtt atcatgatag gtagttctca tggaggatat ttggctcatt
     6361 tagcagctaa atttgcacct tggcttataa atggagtgat agataattct agttatgcta
     6421 agtttctttg gcgtcttata ggttttggca aggaaattga ttttacaaaa tactattgtt
     6481 ttggaacggg tatctttttt aaacatatcc atatttattg ttcagataaa actttttgga
     6541 cgagcaattc gagctcaaat aacttttttt ccataccaag gagaatgata agatatatat
     6601 tagagctaaa tcatatagaa aatcaagcaa attatccaaa accttattat gtaagctacc
     6661 attcttttta tgataaggaa atagctccac ctgatgagaa attagaactt tataaatatt
     6721 taaaacaatt tgattttgat gccgagcttc atatgataaa aaatccagat caaattgatg
     6781 gtaaatttat caaaagttta gatcatggta tgggaatgtc tataaaaact ttgatttcca
     6841 aagaacttcc ttgtatactt gaaaaagttt tatctgaatc tgattctaaa aaagaatgga
     6901 aaaacaaaag cataagctac ccttgtgatg gcttggtgta tcgttttagt gaaaaaaaca
     6961 ataaaatcaa tttagatatc acagagactt aaggaaatcc g
//
LOCUS       DARBAC010000088         6998 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.088, whole genome shotgun sequence.
ACCESSION   DARBAC010000088 DARBAC010000000
VERSION     DARBAC010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6998)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6998)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6998
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.088"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..437
                     /locus_tag="SB799_001373"
     CDS             <1..437
                     /locus_tag="SB799_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868605.1"
                     /translation="QIKFLNFNDESDGTRKFFNIAGIWIDSLKKGNILIIDELNTHLH
                     PLMTKFLVNLFHNEDLNKSNAQLIFTTHDTSILNQDIFRRDQIWFCEKQNKATKLYPL
                     SDFEESEERRDKTNLENDYLLGRFGALPYFKEILSSWSDNGN"
     gene            427..1059
                     /locus_tag="SB799_001374"
     CDS             427..1059
                     /locus_tag="SB799_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RloB domain-containing protein"
                     /protein_id="HEG0868606.1"
                     /translation="MGTDDLRKKRNTKTRDREAKRKKNEIILIVCEGEKTEKNYLNQL
                     KDFFRLSNVSINIISSKKPNPSQIVEFTKEKNKDYSYNKVYCVFDKDTHSDFDKARQE
                     CEKYKFEAITSNPCFEFWILLHFTYTTKSFSTNSPCNELIESDLKKHIKDYKKDYNFT
                     SIIKQNLSTAIANAQKANKEAEKNNYTSSYTFMDKLALKFQELNSARINQ"
     gene            1056..2267
                     /locus_tag="SB799_001375"
     CDS             1056..2267
                     /locus_tag="SB799_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEG0868607.1"
                     /translation="MTNLPQGWEVKTLSEIGEIVTGSTPSKSNLDFYGKDYPFFKPSD
                     FEQGYFLENAGDNLSKLGFGKARQLPPKTILVVCIGSLGKVALTKVIGSCNQQINAII
                     PHKNIISEYIYYYCISSKFQSILFSKAPQTTLAILNKTEFSKLEIIYPKDIKEQERIV
                     GILDFAFSKIDENIKKAKENLANIDELMQSALQKAFNPLNDNTKENYQLPQSWEWKSL
                     GDTSNYGKTSQVKPSQLKGNDWILELEDIEKESGVLLQKVLFQDRQSKSNKIKFNKGD
                     ILFGTLRPYLKKVIIADDNGACSSEIMPFSTGNSITNHFIYYYLFANFLHDRISSLTY
                     GARMPRLGTKDGKSLQIPLPPLQEQEQIAEHLDFVFEKAKALKELYTKELKDYEELKQ
                     SLLDKAFKGEL"
     gene            2412..3896
                     /locus_tag="SB799_001376"
     CDS             2412..3896
                     /locus_tag="SB799_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEG0868608.1"
                     /translation="MQNKIDKITDILRRDDGISGAMHYTEQIGWILFLKFLDDYETNL
                     KDLAFLDGKDYKSILEEKFSWSVWAAPKKDGKLDVKNALSGSDLLEFVNKELFPYLKN
                     FKNNDDFKSIEYKIGGIFEFIDNRIANGHTLREVINIIDEISFNKEDEVFALGEVYEK
                     LLKDMGSDGGNSGEFYTPRPLIKTMVEVIDPKPKERIYDPSCGSCGFLVESFLHILYK
                     DRTKGKKANLSVEELEFLKNDALFGKEKTPLSYAMGVMNMILHEISSPNIIKTNTLSK
                     KITDITEKDKYEVILANPPFGGKEKEQIQENFPIKSNATELLFLQHILKSLKNNGRCA
                     IIVPEGVLFQNSNAFVSVKKDLLDDFNLECVLSLPSGVFLPYSAVKTNVLFFSKGKKC
                     ICEGDGVYYYELIPPYKLTKNKPLEYAHFKEFLKCYKERKITANSWLVSKKELEERNY
                     DLSAKNPNVKEEKILRTSEEILNSLEENLKTQQEYLNELKSILK"
     gene            complement(3974..4729)
                     /locus_tag="SB799_001377"
     CDS             complement(3974..4729)
                     /locus_tag="SB799_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEG0868609.1"
                     /translation="MQLRQKAREIFEKFFGKVEEKLLFTSDKEFFTNHINFTFGESFV
                     KANLDTQKYFLITLASTLAVGGKIEFKALLQGAIKNDISPIVIKEVIYQATPYVGFAR
                     VCDFLSLCNKVFKKLNIALVLTPQGTTTQENRKIKGREIQNAIFSEANITKMIETTPE
                     DKAFINDFLSANCFGDYYTRMGLDLKTRELLTLVYLISLGGLENQVKAHIQGNLNMEQ
                     SRKDLLNIIAALIPYIGYPKALNALNLLDDIKK"
     gene            complement(4836..5255)
                     /locus_tag="SB799_001378"
     CDS             complement(4836..5255)
                     /locus_tag="SB799_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEG0868610.1"
                     /translation="MQELEKAGIHGSFKGDSKFFSKNVKVSMMFKSNEWRNFSGALVE
                     FEASARSAWHTHPQGQTLIVTEGEIITKVPGQKAFIAKKGDVISCPIGVKHFHGATNT
                     SSGAHIALTGEKEGKNVEWLELVSDEEYENALKEARE"
     gene            complement(5313..6503)
                     /locus_tag="SB799_001379"
     CDS             complement(5313..6503)
                     /locus_tag="SB799_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868611.1"
                     /translation="MQALNQEKFNSLSDIKIILVLCLGVFGILSTELGMMGIIPIVSQ
                     NFSVSISDAGWSVSIFALVITFCAPIVPLLCANFNPKKLMLICLAVFILSSLTSAFVS
                     EFWQLLILRAIPAFFHPIYIALALSMVANLVEDKKEIPKATAKIFAAVSAGMVLGVPM
                     TSYFGGNFSFKMAMLFFVFLNTLSFIATLFFVPDFKKVNSVKISKQLLILRYPLLWIS
                     ILCVICINAGIWGFYSYFSDFLHSVGKMNFTLISIVLAIYGFSNIIGNYIAGKTLVKN
                     ANFTLILTPLIMIGFYILLFSFYSEIILIIFAFILGILAGVMNNGTHFMISYPFPKAA
                     NFSNGLFISVANIGLSTGTAICGLVISLSDTRYIIVNTIVLLILGIIMIFVRSRIEKM
                     KLRF"
     gene            6652..>6998
                     /locus_tag="SB799_001380"
     CDS             6652..>6998
                     /locus_tag="SB799_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEG0868612.1"
                     /translation="MQVFFSTFKEFLYLFVELSVLFIGINILVAFLNAKYSNFFEKHL
                     KQDNFQTRLKAIFFGSLTPFCSCSSIPLLNAFLKAKVPLSVCMAYLITSPLINPIIIV
                     VFIVSFGIKISFI"
BASE COUNT         2677 a         1014 c         1016 g         2291 t
ORIGIN      
        1 atcaaataaa atttttaaat tttaacgatg aatcagatgg cacaagaaaa ttttttaata
       61 tagcaggtat ttggattgat tctttaaaaa aaggaaacat tttaataata gatgagctaa
      121 atactcactt acacccttta atgacaaaat tcttagtaaa tctttttcat aatgaagatt
      181 taaacaaatc aaatgctcag cttattttta ccactcatga tacttccatt ttaaatcaag
      241 atatctttag aagagatcaa atttggtttt gcgaaaaaca aaataaagca accaagcttt
      301 atcctttgag tgattttgaa gagagtgaag agagaagaga taaaacaaat ttggaaaatg
      361 attatctttt agggcgtttt ggggctttgc cttattttaa agaaatacta tcatcatgga
      421 gtgataatgg gaactgatga tttacgcaaa aaaagaaata caaaaacaag agatagagaa
      481 gcaaaaagaa aaaaaaatga aattatactt atagtatgcg aaggtgaaaa aacggaaaaa
      541 aactatttaa atcaattaaa agattttttt agattaagca atgtaagcat aaatattatt
      601 tcaagtaaaa aaccaaaccc ttcacaaata gtagagttta ccaaagaaaa aaataaagat
      661 tattcctata ataaagttta ttgtgtattt gataaagata cgcattcaga ttttgacaaa
      721 gcaaggcaag aatgtgaaaa atacaaattt gaagcaatta cctcaaatcc ttgttttgaa
      781 ttttggatac ttttacattt tacatacact acaaaatcat ttagcacaaa tagtccttgt
      841 aatgaattaa ttgagagcga tttaaaaaaa catataaaag attataaaaa ggattataat
      901 tttacaagca ttataaagca aaatcttagt acagctattg caaatgctca aaaagcgaat
      961 aaagaagcag aaaaaaataa ctatacaagc tcatatactt ttatggataa acttgcactt
     1021 aaatttcaag aattaaacag cgcaagaata aaccaatgac aaatttaccg cagggttggg
     1081 aagttaaaac gcttagcgag ataggtgaaa ttgttacggg ttcaacacct agtaaaagta
     1141 atttagattt ttatggaaaa gattatccat tttttaagcc gagtgatttc gagcaaggat
     1201 attttttaga aaatgctgga gataatctat caaaactagg ttttggcaaa gctagacagc
     1261 ttccacctaa aacaattctt gtggtttgta taggttcttt aggtaaagta gcactaacta
     1321 aagttattgg gagttgtaac caacaaataa acgcaattat tcctcataaa aatataattt
     1381 ccgagtatat ttattattat tgcatatctt ctaaatttca gtctatatta ttttcaaaag
     1441 caccacaaac aactttagct attttaaata agactgaatt ttccaaactc gaaattattt
     1501 atccaaaaga cataaaagag caagaaagga tagtggggat tttggatttt gcttttagta
     1561 agattgatga aaatatcaaa aaagcaaaag aaaatttagc aaatattgat gagcttatgc
     1621 aaagtgcttt acaaaaggct tttaatccac ttaatgataa tactaaagaa aattatcaac
     1681 tcccacaatc ttgggaatgg aaaagcttag gggatactag caactatgga aaaacatcac
     1741 aagtaaaacc tagtcaatta aaaggtaatg attggatttt agaacttgaa gatatagaaa
     1801 aagaaagcgg tgttttgttg caaaaagtgt tatttcagga tagacaaagt aaaagcaata
     1861 aaattaaatt taacaagggt gatattttat ttggaacatt gcgtccatat cttaaaaaag
     1921 tgattatagc tgatgataat ggggcttgct cttctgaaat aatgccattt tctacgggta
     1981 attccataac aaatcatttt atttattatt atttatttgc caattttttg cacgatagaa
     2041 tctcaagttt aacctatggt gcaagaatgc ctagacttgg aacaaaagat ggcaaatccc
     2101 tacaaatccc cctaccacct ttacaagagc aagagcaaat cgcagagcat ttagattttg
     2161 tgtttgaaaa ggcaaaggct ttaaaagagc tttacactaa agagctaaaa gattatgaag
     2221 agcttaagca atccttactt gataaggctt ttaagggaga attataatgt taaaaaattt
     2281 gccaaatttt aacacattgg cttgatatgt taaaaatttt tgattttttt aacatattgc
     2341 agttcaaaaa caaaaataaa aaataaaact agactttgat aaaactattt taaaagcttt
     2401 aaagggagaa aatgcaaaac aaaatcgata aaatcacaga tattctaaga agagatgatg
     2461 gcataagtgg tgctatgcac tatacagagc agattggctg gatacttttt ttaaaatttt
     2521 tagatgatta tgagacaaat ttaaaagatt tagcgttttt agatggcaaa gattataaaa
     2581 gcattttaga agaaaaattt agctggagtg tttgggcagc gcctaaaaaa gatggcaaac
     2641 ttgatgtaaa aaatgcttta agtggatcgg atttgcttga attcgtaaat aaagagcttt
     2701 ttccttatct taaaaatttt aaaaataatg atgattttaa aagtatagag tataaaatcg
     2761 gtggaatttt tgaatttata gacaatcgca tagcaaatgg acatacttta agagaagtga
     2821 taaatatcat tgatgagatt agttttaata aagaagatga agtatttgcc ttaggtgaag
     2881 tttatgaaaa acttctaaaa gatatgggta gcgatggtgg aaatagtgga gaattttaca
     2941 cccctcgtcc tttgataaag actatggtgg aagtaataga tcctaaacca aaagaaagaa
     3001 tttatgatcc ttcttgtggt agttgtggat ttttagttga gagtttttta catattttat
     3061 ataaagacag aaccaaaggc aaaaaagcaa atttaagcgt agaagagctt gaatttttaa
     3121 aaaatgatgc tctttttggt aaagaaaaaa ctccgcttag ctatgcaatg ggcgttatga
     3181 atatgatatt acatgaaatt tcaagtccaa atatcataaa aacaaatact ttaagtaaaa
     3241 aaataacaga tataacagaa aaagataaat acgaagtaat acttgcaaat ccaccttttg
     3301 gtggcaaaga aaaagaacaa attcaagaaa attttcctat aaaatcaaat gctactgaac
     3361 ttttattttt acagcacatt ttaaaatctt taaaaaacaa cggaagatgt gcgatcatcg
     3421 tgcctgaagg tgtgcttttt caaaattcaa atgcctttgt gagtgtaaaa aaagatttac
     3481 tagatgattt taatttagaa tgcgttttga gtttgccaag tggggtattt ttgccttata
     3541 gtgctgttaa gactaatgtg ctttttttct ctaaaggtaa aaaatgtatt tgtgaaggcg
     3601 atggagttta ttactacgaa cttataccgc cttataaact tactaaaaat aagcctttag
     3661 aatacgcaca ttttaaagaa tttctaaaat gctacaaaga aagaaaaatc actgctaatt
     3721 cttggcttgt tagcaaaaaa gagcttgaag aaagaaacta tgatctaagt gctaaaaatc
     3781 caaatgtaaa agaagaaaaa atcctaagaa ctagcgaaga gattttaaat tctttagaag
     3841 aaaatctaaa aacacaacaa gaatatctaa atgagcttaa aagcatacta aaatgattgc
     3901 aagttttttg ataaaaacta atttacaaat aacttctaag ctcaatttac aataaatatt
     3961 tattgcttgc attctacttt ttaatatcat caagcaaatt tagggcattt aaagcttttg
     4021 gataaccgat atatggaata agagctgcaa tgatatttag caaatctttt ctactttgct
     4081 ccatgttaag attgccttgt atgtgagctt ttacttgatt ttctagccca ccaagtgaga
     4141 taagatatac aagggttaaa agctctctag tttttagatc aagtcccatg cgtgtatagt
     4201 agtctccaaa acaattcgca ctcaaaaaat catttataaa agctttatct tctggtgtag
     4261 tttctatcat tttagtgata ttggcttcac taaaaatagc attttgtatt tccctgcctt
     4321 ttattttgcg attttcttgc gtagtagtac cttgtggagt taaaactaag gcgatattta
     4381 gttttttaaa cactttattg caaaggctta aaaaatcaca tactctagca aaacccacat
     4441 aaggcgtagc ttgataaatc acttctttaa tgacaatagg acttatatcg ttcttgattg
     4501 caccttgaag taaagcttta aactctattt ttccacctac tgctaaagta gaagcaaggg
     4561 tgattaaaaa atatttttgt gtatccaaat ttgcttttac aaaactctcg ccaaaagtaa
     4621 aattaatgtg attagtaaaa aactccttat cgcttgtaaa aagcagtttt tcttccactt
     4681 ttccaaaaaa tttttcaaaa atttctcttg ctttttgtct taattgcatg gttttatcct
     4741 ttgtgatttt taaagtttat aaaaaagagc atttaaaata ctcaaaaaaa cataaaagtt
     4801 tttataaaat ttttatgttt tatttacaaa tttctttact ctcttgcttc ttttaaggca
     4861 ttttcatatt cttcatcgct aacaagctca agccattcta catttttacc ctctttctcg
     4921 cctgtaagtg ctatgtgtgc tccactactt gtattagttg caccatgaaa atgctttact
     4981 cctataggac agcttatgac atcgcctttt ttagctataa aggctttttg gcctggaact
     5041 tttgtgatga tttcgccctc tgttacgatt aaggtttgtc cttgaggatg agtatgccat
     5101 gcacttctag cactggcttc aaattcaacc aaagccccac taaaatttct ccactcattt
     5161 gatttaaaca tcatagaaac ttttacattt ttgctaaaaa atttactatc acctttaaaa
     5221 cttccatgaa ttcctgcttt ttctaattct tgcattttac ctcatttttt agtattataa
     5281 aacatgagag ctactctaag tcaagtaaaa atttaaaatc ttaatttcat tttttctatc
     5341 ctacttctta caaaaatcat gataattcct aaaatcaaca aaacaatagt atttacgata
     5401 atataacgcg tatcgctcaa agaaatcaca agtccacaaa tagcagttcc ggtgcttaat
     5461 cctatattgg ccacgcttat aaaaagtcca ttgctaaaat tagcagcctt tggaaaggga
     5521 taacttatca taaaatgcgt gccgttattc atcacacctg ctaaaattcc taatataaag
     5581 gcaaatatta taagtataat ttcactataa aaactaaaaa gtaaaatata aaatcctatc
     5641 ataattaaag gtgttaaaat caaagtaaaa tttgcgtttt taacaagggt ctttccggct
     5701 atataattgc ctataatatt tgaaaaacca taaatagcca atacaatact aattaaagta
     5761 aaattcatct ttcctacact atgtaagaaa tcagaaaaat aagagtaaaa accccaaatt
     5821 ccagcattta tacaaataac acaaagtatg ctaatccata aaagtgggta tcttaaaata
     5881 agcaattgtt tgcttatttt tacagaattt acttttttaa aatcaggaac aaaaaataaa
     5941 gttgctataa aagataaggt atttaaaaat acaaaaaata acattgccat tttaaaacta
     6001 aaatttccac caaaataact agtcataggt acacccaaaa ccattccagc actaactgct
     6061 gcaaaaatct tagctgtagc ttttggaatt tctttcttat cttcgaccaa atttgcaacc
     6121 atacttagag caagagctat ataaatagga tgaaaaaaag caggaatagc tcttaaaata
     6181 agcaattgcc aaaattcact cacaaaagca gaagttaacg agcttaagat aaacacagct
     6241 aaacaaataa gcataagttt tttaggattg aaatttgcac aaagtagcgg gacaatagga
     6301 gcacaaaaag taatcacaag tgcaaaaata cttacactcc aacctgcatc tgaaatactt
     6361 acactaaaat tttgagaaac aataggaatt atacccatca tccctagctc tgtgcttaaa
     6421 atcccaaata cgcctaaaca cagcactaaa ataattttta tatccgataa agaattaaat
     6481 ttttcttgat tcaaagcttg catttttgcc ctttatttta aaatttttgc aattataaaa
     6541 gatgagagta gctctaagtc aagtggtaat ttataaaatc aatatataaa tatatcttga
     6601 tatattaata aatttatatt acactgctct aaaaattttt taggaaaaac aatgcaagta
     6661 ttttttagca cttttaaaga gtttttgtat ctatttgtcg aactttctgt actttttata
     6721 ggaatcaata ttttagttgc ttttttaaat gcaaaatatt caaatttttt cgaaaaacat
     6781 ttaaagcaag ataattttca aacacgccta aaagctatat tttttggttc tctaacgcca
     6841 ttttgttctt gctcatcaat cccactttta aatgcttttt taaaagccaa agtaccactt
     6901 agcgtttgta tggcctatct tatcacttcg cccttaataa atcctattat aattgtagtt
     6961 tttatagtca gttttgggat taaaatttca ttcattta
//
LOCUS       DARBAC010000089         6960 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.089, whole genome shotgun sequence.
ACCESSION   DARBAC010000089 DARBAC010000000
VERSION     DARBAC010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6960
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.089"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..293
                     /locus_tag="SB799_001381"
     CDS             <1..293
                     /locus_tag="SB799_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868613.1"
                     /translation="CTLALFLPFINIFVYYLAFYYLFHKLLMIDVTSTILDKESFKNF
                     HSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFFVIFLTHLGYQRILKLKAKA"
     gene            complement(276..1241)
                     /gene="tilS"
                     /locus_tag="SB799_001382"
     CDS             complement(276..1241)
                     /gene="tilS"
                     /locus_tag="SB799_001382"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEG0868614.1"
                     /translation="MQIKDEILALLKRGKNLLAFSYGSDSSALFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQ
                     GYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKNFSNAFVSEFHQGLKRSFSYLDKDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALVYKNEQ
                     AIVFEYETCQKLTKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(1231..2550)
                     /gene="rimO"
                     /locus_tag="SB799_001383"
     CDS             complement(1231..2550)
                     /gene="rimO"
                     /locus_tag="SB799_001383"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEG0868615.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVLIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKDI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            2624..3721
                     /gene="prfB"
                     /locus_tag="SB799_001384"
     CDS             2624..3721
                     /gene="prfB"
                     /locus_tag="SB799_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEG0868616.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANAGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            complement(3803..4195)
                     /locus_tag="SB799_001385"
     CDS             complement(3803..4195)
                     /locus_tag="SB799_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868617.1"
                     /translation="MKKILTSALALGAMTLIVGCGDGDLVELKNNGNDQAMFDLGNQE
                     IMKKYPNYKLYDYTSVRAISDIKDPEGKIKEMKRDLEIDKTPYSNYVFLLNPNDKKDY
                     KVVSVYCDKDFKKRIYCSVNDAFRFYAR"
     gene            complement(4317..5435)
                     /gene="truD"
                     /locus_tag="SB799_001386"
     CDS             complement(4317..5435)
                     /gene="truD"
                     /locus_tag="SB799_001386"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HEG0868618.1"
                     /translation="MNLAEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALINLDKQG
                     FANYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     GRFKARAISAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDKEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(5404..6225)
                     /locus_tag="SB799_001387"
     CDS             complement(5404..6225)
                     /locus_tag="SB799_001387"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEG0868619.1"
                     /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNI
                     KIIGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNG
                     GTLRPNHVFIKPKLRASFFYEVAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLD
                     DYTLYSGEEYEILFAFDEKERQNIKTIAKKHGVKLNIFGKAVKGKYEFSGREHHF"
     gene            6312..>6960
                     /locus_tag="SB799_001388"
     CDS             6312..>6960
                     /locus_tag="SB799_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HEG0868620.1"
                     /translation="MKKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQD
                     DDIYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFSLCIEPLSTKRAIKDLIIDKN
                     DFLDKYKYLEKFGNEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPE
                     KKIEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKT"
BASE COUNT         2392 a         1225 c          900 g         2443 t
ORIGIN      
        1 tttgcacctt ggctttattt ttacctttta tcaatatttt tgtatattat cttgcttttt
       61 attatctctt tcacaaactt ttaatgattg atgttacaag cacgatttta gacaaagaaa
      121 gttttaaaaa ttttcattct gatttttcgc ctttagagtt taaatttagc actctttgtt
      181 tttatctact ctcatcagta ccacttttag gacttttttt gcaagtgttt tttgtgattt
      241 ttctcacaca tttaggctat caaagaattt taaaactaaa agctaaggct tgaaatatcg
      301 attttatgat tgtataaata agctcttaaa agtcttggaa ttttagctat tctacactct
      361 tctttaaaat ttttagttaa tttttgacaa gtttcatact caaaaacaat agcttgttcg
      421 tttttatata caagtgctat tttaccacct aaaacacaat caccttttaa aagctctttt
      481 ctttgtgccg tgcttaaaag caaacctttc attttcaccg ctctagcaat caaactttca
      541 tttttagggc aaataagaag tccttgaatt tctttgatat tttcaaaatc ataaagtttt
      601 ttcctatctt tatcaagata agaaaaactt ctttttaaac cctgatgaaa ttcactcaca
      661 aaggcattag agaaattttt tcttatataa tttctaaaat atttttcatt ttcattactt
      721 tcatcatgga aataaaaaat atctttttct tttaaaaaag atgaaatttc atctttactt
      781 ataaagagta aagggcgtaa aagtgtataa tttgagcgtt tttcacactc ttgcatacct
      841 aaaatttcag ccaaacctgc gcctcgtgaa agttgcatca aaaaccattc aaattgatcg
      901 tttaaatgat gggctaagat aagatggtca taaccttgct caagacaaat tttttcaaaa
      961 aaatcatagc gaaaatctct ggcttttttt tcaaagttac tttgaaattt aggagcgtgt
     1021 tttatgaaaa tttttttatg aaattttaaa gcaagttctt tggcttttaa ctcttctaaa
     1081 tcactatttt ttctagtttt ataatttatc atcacaagat caaagtcgat cttttcttgc
     1141 attaaaagat aaaaaagcgc actagaatca cttccataag aaaaagcaag taaattttta
     1201 ccccttttta aaagggctaa aatttcatct ttaatttgca tctacttttc ttaaagcctt
     1261 agcaaggagt tttttatcaa ggttttgtaa aatttcacat tcataaattt gccccatttc
     1321 caaatttcca cattcgcttt cattaataag aatttcccca tcaatctctc tatcccatct
     1381 tagatcttta gctgcgataa aaaactctcc ctcgctactt tctcctgtgc aaactactaa
     1441 acgcttttgc cctacttctt tttcaaaact tttttctatc acttcatcaa caattttttc
     1501 tatgatttta agtcttttat tgatcacttt aaaaggcact tgctccatat caaaagcggc
     1561 tgtatcttct tccttagaat acgcaaaaac actcacccta tcaaaaccaa agtctttaac
     1621 aaactcacaa agctcttcaa aatctgcctc actttcacct ggatgcccta cgataaagcc
     1681 cgtgcgtaaa aagctatttg gcgcactttt cattaaattt agcatttctt taagtcttgt
     1741 gctatttgcc ccacgcttca tgattttaag catattatca cttatgtgct gcaaaggcat
     1801 atcaaaataa tttacaaaaa tttcagaagc tataatgcgt ttgatcaaag cttcactcgc
     1861 actcgtagga taaagatata aaattctagc cgctcttatg tctttgattt tttccacctc
     1921 atcgattaag cgtataagcc catctttttc acccttatca aacaaataag aactcgtatc
     1981 ttgtgcaata aaagaaaagt ccttataacc tctagctacc aaatctttaa gctcagctat
     2041 aatgctactt atctcgcgag attttaactt gcctttaaaa cttgggatag cacaaaaaga
     2101 gcatttttga ttacaacctt cggcgatttt tataaaagca tgggaatttg aacctgtgat
     2161 aatacgtttg gaattttcac tttgcaaata agtcgaattt gaaaataaat ttgttttttt
     2221 aagtatcatt tcatcgattc tttcataatc acccacacct gtgaaaagat caacctcagg
     2281 aagttctttc ataagttctt cgcggtaacg ctgcatcaaa caacccgtaa ccaccaaaag
     2341 agaatctttt tttctttgtt cgtgcaaatc caaaatcgca ttaatacttt ctttttttgc
     2401 gctatcgata aaaccacagg tatttacgat caaaacatcg gctttacttg gttcatcgca
     2461 aagttcataa gcactaaggc gccctagcat gatctcacta tcgactaaat ttttattaca
     2521 acctaaagac ataagataaa gttttgacat ttttttccta tattaaagtt ttcttttgat
     2581 ataatttttg actttaaaaa tataattata gcaaagaaat tttatggata attacgaatt
     2641 tagcgaactt ttaaaaactt taaaaaacaa agtcggcaac atagcctcca tcatcaagcc
     2701 tgaaaatatc caaacaaggc ttaaagaaat cgaagagctt gaaaattctc cttctttttg
     2761 gagcgatgta aaacaagcag ggatcatagg caaagaaaaa accaaaatca ccaatctact
     2821 taaaaactat gaaaatgctt ttaatgccct aaatgacgca agcgaacttt ttgatctggc
     2881 taatagcgaa aacgatacag aaacgcttga agctttattt aatgacgcac caaaacttga
     2941 agataccatc acaagtcttg aaatttccat gcttttaagc ggagaaaatg atggtaaaaa
     3001 tgctattgtt tccattcacc caggtgcggg tggaacggaa agtaatgact gggcaagcat
     3061 actttataga atgtatttaa gattttgtga aagagaaggt tttaaagtcg aaactttaga
     3121 ctttcaagaa ggcgaagaag caggacttaa agatgtgagc tttttagtta aaggagaaaa
     3181 tgcttatggt tatttaaaag ctgaaaatgg tatccatcgt ttggtaagaa cttctccttt
     3241 tgatagtgca ggacgccgcc atacaagctt ttcaagtgtt atggtaagcc ctgaacttga
     3301 tgatgatata gaaattgaaa tcgaagaaaa agacataaga atagattatt acagagcaag
     3361 tggtgcaggc ggacaacatg tcaataaaac agaatcggct gtgagaatca cgcattttcc
     3421 aaccggcata gttgtacaat gccaaaatga cagaagtcag cacaaaaaca aagccaccgc
     3481 ttttaaaatg ctaaaatctc gcctttatga acttgaactc atgaaacaac aagatagtgc
     3541 taatgccgga gaaaaaagcg agataggctg ggggcatcaa atccgctctt atgtactttt
     3601 cccttatcag caagtcaaag acaatcgcag cggagaagct ttttctcaag tggataatat
     3661 ccttgatgga gatatcaaaa aaatgataga aggcgtttta attgccttaa aagcggagta
     3721 acaggcttaa aaataagtaa tttctgcaaa atgtcggtat aaaaagaatt agaaagatag
     3781 cgggactttc ccgcttgttt tattatcttg cataaaacct aaaagcatca ttcacagaac
     3841 aataaattct tttcttaaag tctttatcgc aataaacact cacaacttta tagtcttttt
     3901 tatcgtttgg atttaataag aaaacatagt ttgagtatgg agttttatct atttctaaat
     3961 cacgcttcat ttctttgatt ttaccttctg gatctttaat atcactaatt gctctgactg
     4021 aagtataatc ataaagctta taatttggat attttttcat aatctcttga ttacctaaat
     4081 caaacatagc ttgatcgttg ccattgttct ttaactcgac taaatcgcca tcgccacaac
     4141 ccacaatcaa agtcatagct cctaaagcca aagcacttgt taaaatcttt ttcattattt
     4201 ttgctcctag ttttaaaatt aaattaatat aactatacct aaatttaaaa tttaaatatc
     4261 atttttgcaa taaattctaa agtaaaaatc acgtaaaaat ttaactcata attatttcat
     4321 tcaaacaaat ttttatgcaa aatttcttct aaaaccacag tagcataaga gcctttttgc
     4381 aagaaaaact ctatacaaaa atgggctttt tctttatcat aacgccattt taactcttct
     4441 aaatatcccc acataaagcg tcttgaacct tgcattttag ccttaaactc caaagtatct
     4501 ttaaaaattt cattttctaa atttaaggcc aaaccttctc ctgtttcata agccttagca
     4561 ccgattaaaa gccccatagc gcttatagct cttgccttaa aacgcccaag ctcagcactt
     4621 aaatcctcac ataaaaaaca ctttccaaaa ggataatgcc ctaaaacctc accttttaaa
     4681 agcttaaaaa attgttcttg ttttttaagt tccttagctt cttctttgga gattttataa
     4741 atttggatca attctttttc gctaaaatca tttgcaaaat gtgataactc cactctttta
     4801 ctcaaatagc gattaaaaag ctcactttga aaagctgaaa ttaaaaactc tttcattttt
     4861 acatttttca tctttttacc acgcaaaatt tcaagccctt ctttataatt atccccaaat
     4921 tttccaaaac gctgataacc aaaataattc gcgaaacctt gtttatccaa atttatcaaa
     4981 gcttgttcta gttttaaagc atcgcttggt aaaacttttt ttaagcgtat gaaaaaagaa
     5041 tttcctttta aatggcctat tcttagcttg ttctcatggg taaaaatttc taaaatttta
     5101 agtttaggat gagaaaaatt tgataaaaaa ctctcaaatt ttttaggcat agaaaggtat
     5161 tgaaaggttg atccttgctt gtctttaagc cctgcataac caaaatctct tattttaacc
     5221 ccacttgctt cacttaaaat ttttaaagct tcatttgtgg ttaaatcttt tttattgata
     5281 tgcaaaataa gatgctcacc cttaccacta aattcataca aaggcctttc acgcactaca
     5341 aaatcatcgc tatttttact aaaatacgca ttaataggac tgtgttttaa actatacaaa
     5401 ggcttaaaaa tggtgttctc ttccgctaaa ttcatatttt cctttcactg cttttccaaa
     5461 gatatttaat ttcacgccgt gttttttggc tattgttttt atattttgac gctctttttc
     5521 atcaaaagca aacaaaattt catattcttc tccgctataa agcgtataat catcaagttt
     5581 tttaaaccaa gaaataccgc atttatttaa ggctaaaagt cttgataaat ccttgcttaa
     5641 accatctgaa atatccatag cacaagaaat taaaggtgcg acttcataaa aaaaactagc
     5701 tcttaatttt ggctttataa atacatggtt tggtcttaaa gtgcccccat tttgtaaaat
     5761 ttcaagccct tttaaacttc gtcctaattt tcccgtataa gcaagtaaat gccccttttt
     5821 taaacctttt ctaaaaacag ctttatcatt aatctttgaa atgatagtaa gactaatgtc
     5881 tattttatca ttgcttatag tatcaccgcc tatgattttt atattaaatt tcctagctgt
     5941 ttttaaaaaa cctttttgca aggctttgat ctcattttcg cttaaatttt ttggtaaagc
     6001 aagtcctaaa agtgcgtatt ttggtacagc attcattgaa atagcatctg agatattaac
     6061 aagcatggct tttgtagcaa tttgctctaa gctaaaccac tctcttttaa aatgcacatt
     6121 ttcaaaaaac aaatccttac taaaacacca atcatcaata atagctccat catcgccatt
     6181 tttttcattt aaaaaagctt tgataataaa atcttctttg ttcataatgc gtgattttat
     6241 aaaatttcct tttaaattct agtgaatttt agaaaaattt tatataatat aaaaatattt
     6301 aaggaaaaac catgaaaaaa ttagaattaa gaatttttag atttgataaa accaaagatt
     6361 atgaggctta ttataaacct tatatttatg ataattatga aaattttgca agtttttatg
     6421 atctgctttt gcaagttcaa gatgatgata tttattttga ttttgataaa gatgaagata
     6481 cttacatagt tgtaaataag caaatcatac cactttttac acctttagaa aaaatagcaa
     6541 aagaatttga ttttagtctt tgtatcgagc ctttaagcac aaaaagagcc attaaagatc
     6601 ttatcatcga taaaaatgat tttttagaca aatacaaata tcttgaaaaa tttggtaatg
     6661 aagaggataa aaaactttat gcaaaatatg attatttata ttatgcaagt gaaattttag
     6721 actatcttcc tgaatatatg ggcgatggag tgttttattt ggcttcaaaa atgatagaaa
     6781 aatatcctga aaaaaagata gaaattttaa aaactctagc agataaagaa aagggtattt
     6841 tttatcatct tgaaagcaaa aatgaaattt tagaaacaac gatcaaaaac ctacaaaatg
     6901 aaattttaaa tttagggctt tttgataaaa atattttaca ctttgattta cctaaaacca
//
LOCUS       DARBAC010000090         6741 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.090, whole genome shotgun sequence.
ACCESSION   DARBAC010000090 DARBAC010000000
VERSION     DARBAC010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6741
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.090"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(74..403)
                     /locus_tag="SB799_001389"
     CDS             complement(74..403)
                     /locus_tag="SB799_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEG0868621.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVGIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            complement(400..1674)
                     /gene="hemL"
                     /locus_tag="SB799_001390"
     CDS             complement(400..1674)
                     /gene="hemL"
                     /locus_tag="SB799_001390"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEG0868622.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQACHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMDDKIIDTTLEAVRESFKRI"
     gene            complement(1671..2018)
                     /locus_tag="SB799_001391"
     CDS             complement(1671..2018)
                     /locus_tag="SB799_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868623.1"
                     /translation="MKIVLMFFLFSISLFGADFITLKEYSKMLYENPRGISCKECHGA
                     DGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            2098..2946
                     /gene="folD"
                     /locus_tag="SB799_001392"
     CDS             2098..2946
                     /gene="folD"
                     /locus_tag="SB799_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEG0868624.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPAS
                     QTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            2956..3804
                     /gene="lepB"
                     /locus_tag="SB799_001393"
     CDS             2956..3804
                     /gene="lepB"
                     /locus_tag="SB799_001393"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEG0868625.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRIVYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPTYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(3826..4986)
                     /locus_tag="SB799_001394"
     CDS             complement(3826..4986)
                     /locus_tag="SB799_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEG0868626.1"
                     /translation="MKNIFETLKDLEDQISCLDESELISLEKAKDRILAKDLYARKNL
                     PSFDNAALDGYAFNYTDINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADT
                     ILMLEDEYIEENKLIIKKAPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNTNALSLLTMLQNTSYLGIIKDNF
                     KSTKEALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GKNFVLILPGNPMAAYLSCFIFAKKIIALLSGNLDNPLKFHATMGMDLKLKSGRNNLI
                     LGNLEKDIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
     gene            complement(4983..6239)
                     /gene="murA"
                     /locus_tag="SB799_001395"
     CDS             complement(4983..6239)
                     /gene="murA"
                     /locus_tag="SB799_001395"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEG0868627.1"
                     /translation="MTYLEIEGTNHLSGNVTISGAKNAALPLIVSSILAKNEVKINNV
                     PNVADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAKGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGTD
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDKVNATHLSAVLAKLHQMGFETLI
                     AEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEEKFKGLGAKITRLEE"
     gene            complement(6305..6733)
                     /locus_tag="SB799_001396"
     CDS             complement(6305..6733)
                     /locus_tag="SB799_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868628.1"
                     /translation="MQINNSLNSLSQYVKVNSNEENQNSKNQEQNALAQDPAVEVNIS
                     KEAKEKSNTSNQNNSQAPAQALNAQNNTQQDSSSDSEDKLTELTQKLAEIQAKIVELT
                     AKMSKANEDQIKSIESQIATLNAQASTIQAQIQELQSQQA"
BASE COUNT         2107 a         1081 c         1102 g         2451 t
ORIGIN      
        1 aacgatgaaa atatgatcca aaaaaataaa tgaataatgg caaaaataca aaatagagct
       61 tttttatgtt ccattatttg ttcttttctt tttgaatttt ttctttgatc aactcatctc
      121 tttctttaaa ttcttcatag ctttttactt gaactttata agctttgtaa acattaagta
      181 tggcagcact gatcccccaa aaaactccaa gccaaaaaag ccaaggataa ggagtaaatt
      241 ttttaagtaa atatcctatt cccacaccta taaatacagc aacaaccata gagatgccaa
      301 gacttaaacc atccgcagct tcaagagttt tgcgaatgat tttttgtctt ttgctgttgg
      361 aattttctaa gtgatttttt tcttctttta aaatattact catattcttt taaagctttc
      421 cctaacagcc tctagtgttg tatctataat tttatcatcc atttttgaac atataaagcc
      481 tgtttcaaat tgagaaggtg ctaaataaat tccattttca agcatatttt tgtgaaattt
      541 tgaaaataat gctagatcag attttaatgc atcttggtag tttgatacag gatctttggt
      601 gaaaaagtat ccaaacatag aacctacatg acaagcttgc agcggaagtc ctttttcatc
      661 tgctaatttt ttcattcctt gggtaagttt ttttgctaat tttccaagtt tgtcataaag
      721 cttggttttc tttttggctt ttgtaagact tgctatacct gcagccattg ccaaaggatt
      781 tccacttaaa gttcctgctt gataaactcc acccaaagga cttaaaatat ccataatttc
      841 agctctagaa gcaaatgctg ctgcaggtag accgcctcct attaccttac caaaagtaat
      901 tatatctgct tggatatgat tgattccata ggaaccaagg taagatgctc tatatccact
      961 cattacctca tcaaaaatca gcagagtttg attgttttta cagatcttag caagttcttc
     1021 taaaaaatct tgtttagctg gaactaaccc catatttcca gcaataggct caatgataac
     1081 acatgcaata tctttatttt tttcaaaaag ctctttaacg ctatttatat cattatattt
     1141 agctactaaa gtgtgtttag ctacatcttc taaaacaccc aaagaactag gagagttaaa
     1201 agtagcagca ccacttcctg cactcactaa taatgaatca gaatgcccgt gataacatcc
     1261 ttcaaatttt aaaattttgt cttttttagt aaaaccacgg gcaagacgaa tagcactcat
     1321 ggttgcttct gttccactgc ttacaaagcg gatcttttct aaatgaggaa aatcagataa
     1381 aacaagcttg gcaagttcag tttctaataa agttggagct ccaaaacttg aacctttatg
     1441 aagtgctttt tgacaagctt tttgtatatc tttatcgcaa tgtccaaaaa gtaaaggccc
     1501 ccagctttga acatagtcta tataagaatt tccatctata tcgaaaatat aagcaccttt
     1561 tccatgagaa ataaattttg gctcactttg aacatttgca aaagcacgaa ctggagaatt
     1621 tacaccgcct gcgatgaatt tacacgcttc tttaaaagct tttttgtttg tcatttttct
     1681 tccttgctaa attgcttgat gtaattatat aaagttacaa tttcatcatt tgttaaagag
     1741 taatttggca tgattgattt tgcgtcttta ctctgattaa gagaattttt aaaattctca
     1801 aaactaagat tttgtatact tggaacttta taagctgttt taataccatt tttcatataa
     1861 tatcctaaaa tttgttcgct tccatctgct ccatgacatt ctttacaact aatgcccctt
     1921 ggattttcat aaagcatttt agagtattct ttaagagtga taaaatcagc accaaaaaga
     1981 ctgatactaa ataaaaaaaa cattaaaaca attttcaaag tttcaccttg ttaatgaagt
     2041 tttaatatga tacaattttt actttaaaaa agtgattaaa tttatagaag gaaaataatg
     2101 actttgcttg atggtaaagc tttaagcgca aaaatcaaag aagaattaaa agaaaaaaat
     2161 caatttttga aaagcaaagg gattgaaagc tgtttagctg ttatcttagt tggagataat
     2221 cctgcaagtc aaacttatgt aaaatctaag gctaaagcct gtgaagaatg tggaattaaa
     2281 tctttagttt atcatcttaa tgaaaatact acacaaaatg aacttttggc attgattaat
     2341 accttaaatc acgatgatag tgttcatgga attttggttc agcttccctt acctgatcat
     2401 atttgtaaag atttaatact tgaaagtatt ataagtagta aagatgttga tggctttcat
     2461 cctattaatg taggatattt aaatttaggc ttagaaagtg ggtttttgcc ttgtactcca
     2521 cttggagtta tgaagctttt gaaggcttat gaaattgatt tagaaggaaa agacgctgtt
     2581 attataggtg cttcaaatat agtaggtcgt cctatggcta ctatgctttt aaacgctgga
     2641 gctacagtaa gcgtttgtca tattaaaacc aaagatttga gcctttatac taggcaagct
     2701 gatttgatta tagtagcagc aggttgtgtg aacttacttc gatcggatat ggtaaaagaa
     2761 ggagtgattg ttgttgatgt tggaatcaat cgtcttgaaa gtggaaagat agttggagac
     2821 gtggattttg aagaggtatc taaaaaatct agttatataa ctcctgttcc aggtggagta
     2881 ggtcctatga ctatagccat gcttttagaa aacacagtta aatctgctaa aaatagactt
     2941 aattagggaa aatctatgga aattttaaag aaattatata aattttcaca gtcttggact
     3001 ggaactgtag ttattgttct tttggtgatt tttttcttta tacaagcttt tgttattcct
     3061 tctggttcta tgaaaaacac cttgttggta ggggattttt tatttgttaa aaaatttagc
     3121 tatggtatcc caactcctca tattccttgg ttggaaattc ctgttttgcc tgattttaat
     3181 aaagatgggc atttgataaa agcacaaggg ccacaaagag gagatatagt tgtttttaga
     3241 aatcctagaa atgaaaaaga acactttgta aagcgttgtg taggcacagg aggagatagg
     3301 atagtttatg caaataaaac actttatgta agaatgcatg agggtgatga atttatgaaa
     3361 gaacattatc cgaatgatct tgttactctt ggagggcaaa tttatgtaaa agaaccttat
     3421 aaacaaaaag gtattcatta tgatccaaaa aaagatatag aaagcgatat tttacgcttt
     3481 cttagcatag gtgattttgc catgtctcca acttatatta aagaacttgg aaatcatata
     3541 ggttttagcg gcggaaatgc ttatgttttt gatgtacctg aaaatgagta tttcatgatg
     3601 ggtgataatc gcgattattc ttatgatagt cgtttttggg gttctgttcc ttataggttg
     3661 atagtaggta aaccttggtt tgtatatttc tcttgggata aagataaaaa tgttcgctgg
     3721 gaaaggatag ggcgttttgt tgacaccttg gaaaatgatg aacaatatat ccatgatcat
     3781 gatgatgagg ataaattaag ctaatgtttg tgaaaaacac aaacattata tttttaaaag
     3841 cgtgatttca tcaccttttt ttaattcact tgtattttct tcgcttataa gtaaaaactc
     3901 acttttaata agtggaagta tcataccaga tccaaattta ttttcattaa atggtgtaaa
     3961 aatatctttt tctaaatttc ctaaaatgag attgtttctt ccacttttaa gctttaaatc
     4021 catacccatt gtagcatgaa attttaaagg attgtctagg tttccactta ataaagcaat
     4081 aattttttta gcaaaaataa aacaagaaag ataagctgcc ataggatttc ctggtaaaat
     4141 caatacgaaa tttttaccct ttctataaag tttagtaggt cttgcagggc gtgcttttag
     4201 tcctttaaaa agcggagtaa agcctaattc atctaaagct ttttccataa aatcagcctc
     4261 gccaacgctt gcacctcctg aagtgattaa aagatcaaaa tttgtatttt ctaaagcttc
     4321 tttagtgctt ttaaaattat ctttgatgat gcccaaataa gaagtatttt gaagcatggt
     4381 tagtaaagac aaagcattgg tattataaat actttcttca tcgcattctt gccaaggttc
     4441 ttttagctca tttccacttg aaaaaatacc tatacgaatt tttcttatga cttctatttt
     4501 ataaagccct tgagaagcaa gcagggcgat atgtttatca ttaagtttgg tgcctttttg
     4561 aagtaaaatt tcaccttttt ttaattcttc gcctttatag cgataggcat tgtattgttt
     4621 aggagctttt ttaatgatga gtttattttc ttctatatac tcatcttcta acattaagat
     4681 agtatcagca tttttgggca ttttagcccc tgtcatgatt ttatagcatt catttttagc
     4741 aactgtataa aaatttttat ctcctgcaaa aatagtccct ttaatctcca aagcttcatt
     4801 gatatcagta taattaaaag catagccatc aagagcagca ttgtcaaaac tgggtagatt
     4861 ttttctagcg tataaatctt tagctaaaat tctatctttt gctttttcaa ggctaataag
     4921 ttcactttca tctaagcatg aaatttgatc ttctaagtct tttaaggttt caaagatatt
     4981 tttcattctt caagccttgt gattttagcc cctaagcctt taaatttttc ttctaaattt
     5041 tcataacccc tatcaagatg ataaattcta tggactttgc ttgtgccttt agctgcaaga
     5101 gctgctaaga taagggctga agaagcacgc aaatctgtag ccatgacatc agcagcgtta
     5161 agttcttttc cgcctactat agtagcaata tgaccgttga gtttaatatc cgcacccatt
     5221 cttaaaagtt cacttacatg catgaaacga ttttcaaata gtctttcatc gataatacta
     5281 gttccattag cttttaaggc taatgccata aactgcgctt gcatatcggt tggaaagcct
     5341 ggatattcac ttgtcatgat ttctacaggt ttaatttctt tagcaggaag tagggtgata
     5401 ctatcttctg caatcaaagt ttcaaaaccc atttgatgaa gttttgctaa aactgcacta
     5461 agatgagtgg cattaacttt atctaaagta attttagaat ttgtaatagc cccagcacaa
     5521 agataagttc ctgcctcaat tctatcaggt ataacgctaa attctttaaa ttctaaaagt
     5581 tctccatcag tgccataaat ttcaagttca tctgtaccta tgcctttaat ttcaagtcct
     5641 gcgtctttta aaacttcgca aagttgaact acttcgggtt cttttgcaac atttaagagt
     5701 ttggttttac ctttagctag agctgctgcc atgatgatgt tttcactacc tgtaaccgtg
     5761 attttatcaa aaagaatttc attgcctttt aaatttccac tagctacgac atagccttgt
     5821 ttgatttgta tatttgcccc cattttttcc aaggctaaaa gatgtaaatc aataggtctt
     5881 tgtcctatgg cacatccacc aggcaaagat acttcacaat gcccaaaacg agcaagtaaa
     5941 ggccctagag taagtatgga agcacgcatt ttacgcacaa tgtcatactt ggctatggtt
     6001 tgattaagag tgtttgtgtt taataaagca ctattgtttt gaaaattgac cttagcgcct
     6061 aaattttcta gcaaagatat aagagttttt atatcagcaa cattaggaac attgttgatt
     6121 tttacttcat ttttagcaag tatacttgaa acgatcaagg gtagggcagc attttttgct
     6181 ccgcttattg taacatttcc gcttagatga tttgtgcctt cgatttctag ataagtcata
     6241 tttttccttg aaaaagttta aaaatgcatc attatagcat tcttaaactt ttgaaaaaat
     6301 ataatcaagc ttgttggctt tggagttctt gaatttgagc ttgaatagtt gaagcttggg
     6361 catttaatgt tgctatttga ctttcaatac ttttgatttg atcctcatta gctttagaca
     6421 ttttcgcagt tagttcaaca atttttgctt gaatttctgc aagcttttgt gttaattctg
     6481 taagtttatc ttcactatcg ctgctactat cttgttgtgt gttgttttgt gcgtttaaag
     6541 cttgagctgg agcttgagaa ttgttttgat tagaagtatt tgatttttct ttggcttctt
     6601 tgctgatatt tacctctaca gctggatctt gcgctaaagc gttttgttct tgatttttag
     6661 agttttgatt ttcttcgttt gagttgactt taacatattg acttaagcta tttaaggaat
     6721 tgttaatttg catattttct c
//
LOCUS       DARBAC010000091         6658 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.091, whole genome shotgun sequence.
ACCESSION   DARBAC010000091 DARBAC010000000
VERSION     DARBAC010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6658
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.091"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            442..2705
                     /locus_tag="SB799_001397"
                     /pseudo
     CDS             442..2705
                     /locus_tag="SB799_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002933025.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2802..4505
                     /locus_tag="SB799_001398"
     CDS             2802..4505
                     /locus_tag="SB799_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEG0868629.1"
                     /translation="MKKLNKLSLSLVVGSLLFTQSYALPSGGKFTHGTSGSISVSGGT
                     MNISGSKTNSVIQWGGGFNIANGETVNFKGNGYNYLNIVYGSKSSHIDGTLEGGTNNI
                     FLINPNGIVVGKDGSINANRVFLSASSIGDKEMKEFAKDGKISAFEGNPLTTASPVIK
                     SNAGNVINLGTITAGERVVMVGNQVSNMKYGSTDYGKFIFTNKKEQSNTVYLDVYSND
                     IFVIRGPASNTIKKEDSVMLSIRPNKGSTGPGGDPTDTIGYKETSDLVAKDNISNEVL
                     NSIFNDLKFNSSVDISDLSKFYKDGKILTADELTSINQSMDFITALYGQTQDSNNATF
                     ANALKEVLGNSYGNLGKANQAIIKTKEILSQIPKITEQQKNIQKAYDQAVDAYNEAVK
                     KYNAALSGVTGSNASETITALKTVLDKAYNDLKNAEANLESTTASNNSSLKSSNETLA
                     SVSIDGYKLTVNGEYLADYKTVNKPNDNNSGSNNGNDGTDSGDINNGNNNGSNNNPND
                     TIGQQEPDIATALLMQTTDEDPNINEDDKQASIDEASTQESGNACIVSDNFKAGNPCS
                     R"
     gene            4829..6559
                     /locus_tag="SB799_001399"
     CDS             4829..6559
                     /locus_tag="SB799_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEG0868630.1"
                     /translation="MLEQSPYKEDANLKNYNNTLKVKDGVIIIDHSNTSDDNNSKTIN
                     TKKNTQKDNNNTQKNQPNLSNDNTLKTKTPNSNTPSLKNTSKEESIHKVSFSFHITNK
                     NINFKDLGLDEQVLQEALNDYKKESISVQDLQDIANIISYYVQVSGYPAATAYIPQQE
                     LKDQIQINITLGVLGKYVVQNNSSVRDYAIESKLPNHKGEIITTKLVEDAVYKVNEMY
                     GIQTLASLKAGDNPGETDVVIETTPSDSFVSVLFYGDNYGIKESGRYRGGASMSFNNI
                     AHQGDSLNAYLQRSDEAQTNYGISYTTFLGNLKITPSYSKGNYALGGIWREFDFIGTS
                     ENLGIDLKYPLWITTYNSFYLTSSYYHKKLSDSKFDILTFDKSSDTISFGIEGVYNGI
                     SNDSFSYSANVSYGNVKDEGMTIVGIGTSKVGGVEFGKFAKLNVNLNNAYFFNDTFTH
                     LFSLNYQQVINGATLDSSETISLGGPYGVRAYNNGDGEGDNAVVASFGLRMATPLKDF
                     YITPFYDIGYSWYENDSYTNYMDAYGLQLLYNKTGNFYVKLDLARALKKYKLDDDYSS
                     KAYVSFGKYF"
BASE COUNT         2615 a          931 c         1033 g         2079 t
ORIGIN      
        1 attttaattt aatttataat taagctaaat ttaattagaa ttgcactcgt tttttgcgat
       61 gttacaaaac attgttattt taattttatt ttccaaggac atctatgcca gctattaagc
      121 tttttaactt cacgggggcg gggtatagag aaattttgtt ttaaactttc tattgttacc
      181 ttcttaagta tcaacgcttt tgcagccact caagcaaata ctacagacaa tcgaaatttc
      241 aatattccag agcattattt taatgataac gaactttatg ataaaagcaa ttctacttat
      301 aaaaaactcc aaggtataaa ttattatgct aagagttcta aacaagatat taacaatatt
      361 actttaattt ataacaatcc taaaccaaat attacaaata taaacgattt aaattttaaa
      421 cattatttac ttactcctga tatgagagaa gatgaagttc tttcttttaa agcaaggcat
      481 ggtgttaata cagccgatca tagtataaaa acagttaaag tgcttccttt tttaatcaca
      541 gcaaaaaccg atcatgctga tgcaagttat aataaactta tattagaaca aggagaactt
      601 agttcggttt tttatcttaa acctaaagat actcatataa aaaaccctag taattctaaa
      661 agcaatcaac gcatgaattt cttaatgagt tctaccttta ctcattatgg taatgcaagc
      721 tataaccaaa ccatacttca aaaagatgct catattagta tgggagttga gaacacttat
      781 gatttagcct taaatggtgc tccttattta atcggagcta tagccactta tggagattct
      841 acaaataata gtttaaatat agaagcaggt agcagtgtag agttttttac ttccttacct
      901 aaaaaagata aaaatggtaa taataccttt gatgaaagaa tcactcacct tgtaggtggt
      961 ttagcttatc aaggtaatgt aaaaaacaat aaaatcttta tcaaagatgc taatatgatt
     1021 atccatggtc caagcaaagc ttatgctagt tcagctgctg ctcatattag cgcaggttat
     1081 atagatagtg gaacagataa aaactttcaa gccagtaaaa accttttaga catagatggt
     1141 tttaatcttg atatgtatat gaaccatgat aaacaacccc tagcttataa ttctgtttta
     1201 tttgctgatt tttggggtgg aaaaaccgaa caaggacaag ccttagataa tactatcaat
     1261 ttaaaagata ttaaaaacct aaaaaaagat aaaaacaatg agaacatttt tgctcaagct
     1321 ttgtttaact tctatgcagg agcttctaat aatggagaag caaattataa taccttaaac
     1381 atagaattaa aacatccttt agaaatcgct aataacttct taggttataa ccaacattct
     1441 ttttatggtg gctttgcaac taaaggagct aatcataata ccattaacat taaaaacgat
     1501 cttaccacaa ccgatctttc tcaaagctat aaagatgctt taaatattgt agctgctaga
     1561 accttagaag gcagtgcgga ttataataaa gtttatatca ataattctat gtcaacctta
     1621 cctgtataca tttatacagc taagaaaaac attcttaata atcaagactt ttatcctagt
     1681 ggtgctaata acaatgaagt agtgattaaa gactttgctt cttttagaaa tctaactgta
     1741 ttaacagaag ctaaagaagc ctcttataat actataaatt acaacaatgt tcaaagcatt
     1801 accgatgcaa gtaatataga taaaggttct aaaatcatca taagagcttt agataaagcc
     1861 aatcataata ccatagatat aaaaaactat tcttctaatg cagctgataa tgcttatttg
     1921 attatggctt acaatgaagc agcttataat aaaatcatta tcaatgatac tttatttggt
     1981 gtagcttcag ataaaagaga aggaatttta agtattatag ctggactttc aaacaatgcc
     2041 catgataata ccttaatcat aaacaatctt aatcttgatg agtataaaaa taacaattct
     2101 atttttatag ctccttcagc cattacaggt ttaagtgaag ctaaatctta taataatacc
     2161 ttatatatag gcgggaattt aaatatattt aaaaacactt tcatagatat attagcaggg
     2221 gctttagtgc attatgaaga tagcaatagt gcttctaatg ctgtagctcc ttcagatatc
     2281 agtttaagta aaaacaatag actgatttaa atactaaagt tgaagctaga attattaata
     2341 actttgagca ttattatctt attgtatcca ataaaatcaa cacaaccccc cttttgaagt
     2401 catacgatgc tcctattaat atttctagcg agggagtatt agctctttac accctcaaag
     2461 agcaataccc ctaccttaaa aataaagaaa tcttaatctt acaaagtgag caaggtttta
     2521 tagatgaaaa ttctaatact ttaaatcaag aagaacttca aagctttatt gaaaaaatgc
     2581 aaaaaaacaa agaagatttt aaactaagtt ctatagatag attaaaaaag atgaatttac
     2641 aaaaactttc ttatgaagta agaatatccc aagatggtaa aagcatttac gcaaagataa
     2701 aataaatcat tcctatctta aagataggaa tcttttgctt gtatttttat aaatataaac
     2761 aaaagattct taaatcttaa tcttacaaaa aggagcaagt catgaaaaag ttaaataaac
     2821 tttctttgtc tttagttgta ggttctttac tttttacaca aagctatgct ttaccaagtg
     2881 ggggtaagtt cactcatgga acaagtggaa gtataagtgt tagtggtggc actatgaata
     2941 tctcaggaag taaaacaaac tctgttatcc aatggggtgg tggttttaat atagcaaatg
     3001 gtgaaactgt aaattttaaa ggtaatggct ataactactt aaatattgtc tatggttcta
     3061 aaagctctca tatagatgga acactagaag gtggtacaaa caatatcttt ttaatcaatc
     3121 ctaatggtat agtagtgggt aaagatggaa gtattaatgc aaatagagtg tttttatctg
     3181 cttcatcgat aggggataaa gagatgaagg agtttgcaaa agatggaaaa atttcagcat
     3241 ttgaaggaaa tcctctgaca acagcatcac ctgtaattaa atccaatgca ggaaatgtta
     3301 taaatttagg aactataaca gcaggagaaa gagttgttat ggtaggcaat caagtttcaa
     3361 atatgaaata tggtagcact gattatggta aattcatttt tacaaataaa aaagaacaat
     3421 ccaataccgt ctatcttgat gtctatagta atgatatatt tgtcattcgt ggtcctgcat
     3481 caaatacaat aaaaaaagaa gactctgtaa tgttgagtat aagacctaat aaaggctcaa
     3541 ctggaccagg aggagatccg acagacacaa taggttataa agaaactagt gatcttgttg
     3601 ctaaagataa catctcaaat gaagttttaa attctatatt taatgacttg aaatttaatt
     3661 ctagtgttga tattagcgac ttaagtaaat tttataaaga tggaaaaata ttaacagctg
     3721 atgaattaac aagtattaat caaagtatgg attttattac tgctttatat ggacaaactc
     3781 aagatagcaa taatgcaaca tttgcaaacg ctttaaagga agtattggga aattcttatg
     3841 gtaatctagg aaaagctaat caagccatta ttaaaacaaa ggaaattctt tctcaaattc
     3901 ctaaaataac cgaacaacaa aaaaatattc aaaaagctta cgatcaagct gtagatgctt
     3961 acaatgaagc agtgaaaaaa tacaatgctg ctttaagtgg agtaacgggt agcaatgcta
     4021 gtgaaactat aactgcttta aaaactgttt tagataaagc atataatgat ttaaaaaatg
     4081 ctgaagctaa ccttgaaagc actacagcaa gcaataattc tagcttaaaa agttctaatg
     4141 aaactttagc aagtgtaagc atagatggtt ataaactcac agttaatgga gaatatcttg
     4201 cagattataa aactgttaac aagcctaatg ataacaatag tggttccaac aacggaaacg
     4261 atggaaccga ttcaggtgat attaacaatg gtaataacaa cggttctaat aacaatccaa
     4321 atgataccat aggacaacaa gaacctgaca ttgctacagc tttgcttatg caaactacag
     4381 atgaagatcc aaatatcaat gaagatgata aacaagcaag tatagatgaa gccagtactc
     4441 aagaaagtgg taatgcttgt atagtatcgg ataattttaa agcaggaaat ccttgctcaa
     4501 gatgattaaa atccaaaagg ttaaaagcct tttggatctt gttaaaaatt aataaaacaa
     4561 acaaaattta aagattaaaa atcaaaaaag attgataatc aatcaaacaa atacaaaaaa
     4621 taaagaaaaa taaaaagata aaaagaaaga aaaaataaaa acagaaaaag caaaaaataa
     4681 aaaagattaa aaactaaatc tataaaacaa gctcttatga aatcattaaa aaggaaaaac
     4741 acaaatgaaa cgcattatct tactatctag tttagctatc ttaagccttt atgctagtga
     4801 tactaaagat aataaaaaaa ccatacaaat gttagaacaa tctccttata aagaagatgc
     4861 taacttaaaa aactacaata acactttaaa agtaaaagat ggagtgatta tcatagatca
     4921 ttctaatact agtgatgata ataattcaaa aaccatcaac acaaagaaaa acactcaaaa
     4981 agataataac aacactcaaa aaaatcaacc taatttgtct aatgataata ctttaaaaac
     5041 taaaacccca aattcaaaca ctccttcttt aaaaaatact tctaaagaag aatcaattca
     5101 taaagttagc tttagctttc atattaccaa taaaaacata aactttaaag atctaggttt
     5161 agatgagcaa gttttacaag aagccttaaa cgattacaaa aaagaaagta tttcagttca
     5221 agacttacaa gatatagcca atattatttc ttattatgtt caagttagtg gctatcctgc
     5281 tgctacagct tatatcccac aacaagaact aaaagatcaa attcaaatca atatcacctt
     5341 aggtgtttta ggtaaatatg tggttcaaaa caattctagt gtaagagatt atgctataga
     5401 aagtaaatta cctaatcaca aaggtgaaat catcactact aaattagtag aagatgcggt
     5461 ttataaagtc aatgaaatgt atggcataca aacccttgct tctttaaaag caggagataa
     5521 tccaggtgaa acagatgtag tgatagaaac tacccctagt gatagctttg tttctgtatt
     5581 gttttatggg gataattacg gtataaaaga atcaggcaga tataggggtg gtgctagtat
     5641 gagttttaat aacatagctc atcaaggaga tagtcttaat gcttatttgc aaagaagcga
     5701 tgaagcacaa actaactatg gtataagcta tactactttc ttagggaatt taaaaatcac
     5761 tccaagttat tctaaaggaa actatgcttt agggggaatt tggagagaat ttgactttat
     5821 aggaacttct gaaaatctag gtatagattt aaaatatcct ttgtggatta cgacttataa
     5881 ttctttttat ttaacttcaa gctattatca taaaaaactt agtgattcta aatttgatat
     5941 tttaaccttt gataaaagct ctgatacgat aagctttggt atagaaggag tttataatgg
     6001 cattagcaat gatagttttt cttatagtgc taatgtaagc tatggtaatg ttaaagatga
     6061 aggtatgact atagtaggta taggaacaag caaagtaggt ggagtagaat ttggaaaatt
     6121 tgctaaactt aatgtcaatc ttaacaatgc ttatttcttt aatgacacct ttactcatct
     6181 ttttagctta aattatcaac aagttatcaa tggagctaca ttagatagta gtgaaaccat
     6241 atctttagga ggtccttatg gagtaagggc ttataataat ggagatggag aaggagataa
     6301 tgctgtagtg gctagctttg gacttagaat ggccactcct ttaaaagatt tttatatcac
     6361 tcctttttat gatataggtt attcttggta tgagaatgat tcttatacaa actatatgga
     6421 tgcttatggt ttacaactac tttataataa aacagggaat ttttatgtta agcttgattt
     6481 agctagagct ttaaagaaat ataaactaga tgatgattat agttctaaag cttatgtaag
     6541 ctttgggaag tatttttgag ttttagcaag aagtttttct tgctaagggt gtaaggggtg
     6601 gataggagaa attttggaca aactaatcac ttggaatgaa aaatacagta ttcatgat
//
LOCUS       DARBAC010000092         6378 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.092, whole genome shotgun sequence.
ACCESSION   DARBAC010000092 DARBAC010000000
VERSION     DARBAC010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6378
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.092"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..370
                     /gene="pif1"
                     /locus_tag="SB799_001400"
     CDS             <1..370
                     /gene="pif1"
                     /locus_tag="SB799_001400"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HEG0868631.1"
                     /translation="KILLEPYTFFMEELEQSGKDFVVNILASVTQFPIKLAYAITIHK
                     SQGMSIEKLVCDIDHIFENGQLYVALSRATNPNTLKIYSTKKINFGFYFANILKIDSN
                     VIEFYKKHNFLDLEIQEQII"
     gene            380..1114
                     /locus_tag="SB799_001401"
     CDS             380..1114
                     /locus_tag="SB799_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868632.1"
                     /translation="MKKIFLSVFLALSLNAQNLEIDKIRTDLYSKSGANVLKKVEISL
                     EFDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGKNNFKKTLEKFLDKKYKIKLDDI
                     YIISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPGVEKIPTPS
                     VPNLEAKQVEQLFKDSDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFK
                     ENNASKPYHLPQTGYDIKLDENSTQN"
     gene            complement(1111..1620)
                     /gene="lolA"
                     /locus_tag="SB799_001402"
     CDS             complement(1111..1620)
                     /gene="lolA"
                     /locus_tag="SB799_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEG0868633.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSDFIQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLVAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDVFKAK
                     IPQNYDIVR"
     gene            1721..4309
                     /gene="secA"
                     /locus_tag="SB799_001403"
     CDS             1721..4309
                     /gene="secA"
                     /locus_tag="SB799_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEG0868634.1"
                     /translation="MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGKYQNLSDDELK
                     AEFAKFKEQILSGEKNENDILNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVILS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKVEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANSKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKNIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMSRLGIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            4306..5511
                     /locus_tag="SB799_001404"
     CDS             4306..5511
                     /locus_tag="SB799_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868635.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALRDENLSGFDILVGSALIDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPN
                     YDGIHVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPADVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            5534..6319
                     /locus_tag="SB799_001405"
     CDS             5534..6319
                     /locus_tag="SB799_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEG0868636.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELIRGTPLLVQVLLMYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERKCQK"
BASE COUNT         2262 a          757 c         1150 g         2209 t
ORIGIN      
        1 gaaaatttta cttgaacctt atactttttt catggaagaa cttgaacaat caggtaaaga
       61 ttttgttgtt aatattcttg caagtgttac acagtttcct attaaattag cttatgctat
      121 cactatacac aaatcacaag gtatgagtat tgaaaaatta gtgtgtgata ttgatcatat
      181 ttttgaaaat ggacagcttt atgtcgctct ttctcgcgct acaaacccaa atactttaaa
      241 aatttattct acaaaaaaga taaattttgg attttatttt gctaatattt taaaaataga
      301 ttctaatgtg atcgaatttt ataaaaaaca taatttttta gatcttgaaa tacaagaaca
      361 aatcatttaa aggcattaaa tgaaaaaaat atttttaagt gtttttttgg ctttgagttt
      421 aaatgctcaa aatcttgaaa tagataaaat aagaacagat ttgtattcta aaagtggggc
      481 aaatgttctt aaaaaagttg aaatttcttt ggaatttgat gggaataatt taaaagaaaa
      541 tgaaaataag ttgattgatg ctgtaaatac agtaatttca gggttttttt acgaagatat
      601 ttttacagaa attggaaaaa ataattttaa aaaaacttta gaaaaatttt tagataagaa
      661 gtataagatt aaattagatg atatatatat catatcttta agcggagtgg aaaaatttga
      721 tttagaggag tttaaacgct ttttagaaag cactgaggct aaagagaaag gtatgggcag
      781 cgaggtaaaa aaagcacttg aaaacttaga agttcctaaa actcaagttc ctggtgttga
      841 aaagatccca actcctagtg ttccaaattt agaagccaag caagttgaac agcttttcaa
      901 agattcagat gaagaaaata aaaatgacaa tggagaaatc aatatagata atttaaatac
      961 acctaaaatg actccagata tagaagaaaa aattaaaaga gatttaatcg ccaatcctcc
     1021 acaaatattc aaagaaaata atgcaagcaa gccttatcat ttgccacaaa caggctatga
     1081 tataaagctt gatgaaaatt caacgcaaaa ttagcgaact atatcataat tttgcggaat
     1141 ttttgcctta aaaacatcgg aattaatttt tggattttta atttgattgt ttagattgat
     1201 tataacatca ttttcaaatt catctttata ggatatgctt tgaatttgct cttgattaag
     1261 cttaattgta tagtttatat tatcatattt tgctacaagt ttatctttgt ctataagact
     1321 tgcttttttg aaaatttcat taagatttgg aatgttatca agatgagaga aaatgacttg
     1381 ttctagatcg tgctctacta tggttacttg atttttgtta atataaatct cttttttact
     1441 aggagtatca taactccaat atgcttgatc cttactcagt ataaaatgtc cagaataaga
     1501 aagtgtagag tttttggatt ttactatttg gataaaatcg cttgaaaagg tattaaaatt
     1561 aagatcaagg gcaaaaagtt gtcctataaa aataaaaaat atcaagaatg tttttttcat
     1621 ttattttcct taaaaaaatt atatttttta tatcattcta gctaatttta attaaataat
     1681 cgttataata atagtttgaa aaatttataa aggtttaaaa atgtttttaa ataccttaaa
     1741 agccgttttt ggaacaaaaa atgatcgtga agttaaaaaa tactttaagc gtgtagcaca
     1801 aatcaatgct ttagaaggca aatatcaaaa tttaagcgat gatgaattaa aagccgaatt
     1861 tgcaaaattt aaagagcaaa ttttaagcgg agaaaaaaac gaaaatgata tcttaaatga
     1921 tgtttttgct atagtcagag agacaggtaa gagaacttta aatatgcgtc attttgatgt
     1981 gcagttaatc ggtggtatgg ttttgcacga tggaaaaatt gcagaaatga aaacagggga
     2041 gggtaaaacc cttgtagcga ccttgcctgt tgttttaaat gccatgagtg gaaaaggcgt
     2101 acatgtcgtt acagtaaatg attatctagc caaaagagac gctgagcaaa tgagtgcgat
     2161 ttataacttt ttaggtttta gtgtaggcgt gattctttct tctcaaaaca gtgacataga
     2221 gcacaagcaa gcttatgatt gcgatattac ttatggaacc aataatgagt ttggttttga
     2281 ttatttgcgt gataatatga aattttcaaa agttgaaaaa gttcaaagag agcataattt
     2341 tgttattgta gatgaagtag atagtatttt aattgatgag gcaagaactc cgcttatcat
     2401 cagcggtcct acaaatcgca ctttagatgg ttatattaaa gccaatgaag tagccaagca
     2461 aatgcaaaaa ggcgaagcag ttttaccccc tgcaaaacct gagggtgatt ttgtagtaga
     2521 tgagaaaaat cgtaatattt taatcacgga agcaggtatt gctaaggctg aaaaactttt
     2581 tggtgtagaa aatttataca gtcttgataa tgctatctta gcacatcagc ttgatcaagc
     2641 tttaaaggcg cataatcttt ttgaaaaaga tgtgcattat gttttaagaa ataatgaagt
     2701 tatcatcgtt gatgaattta cagggcgttt aagtgaaggg cgtcgtttta gcgaaggatt
     2761 gcatcaagct ttagaagcca aagaaaatgt aaaaattcaa gaagaaagcc aaactttagc
     2821 agatattact tttcaaaatt attttagaat gtataacaaa ctcgcaggta tgacaggaac
     2881 tgcacaaaca gaagcgactg aattttctca aatttatagt ttagatgtta tttctatacc
     2941 gacaaatatt cctattaaaa gacaagataa agatgatctt atctataaaa ctcaaaatga
     3001 aaaatttaaa gctgtaattg aagagatcaa aaaagccaac tctaaaggtc agcctgttct
     3061 tgtgggaact gcaagtatag aacgcagtga agtttttcac aatatgcttg taaaagaaaa
     3121 aatccctcat catgttttaa atgctaaaaa ccacgagcaa gaagctttga ttatccaaga
     3181 tgcaggtaaa aaaggtgctg taactatcgc tacaaatatg gcaggtcgtg gtgtggatat
     3241 aaaaatcgat gatgagatta gggctttggg tgggctttat atcatcggta cagaaagaca
     3301 tgaaagccgc cgtattgata atcaacttcg tggtcgtgca ggaaggcagg gcgatcctgg
     3361 aataagtcgt ttttatctaa gtttagaaga taatctttta agaatttttg gcggggatcg
     3421 tattaaaaat attatggatc gcttgggcat agaagagggc gaaagcatag agtcaagaat
     3481 tgttacaaga gcggttgaaa atgcgcaaaa aaaagtagaa agcttacatt ttgaaagcag
     3541 aaagcatttg ttagaatacg atgatgtagc aaatgaacaa agaaaaacta tttatcgtta
     3601 tcgcaatgag cttttagatg aaaactatga tattagagct aaaatttctc aaaatatcgc
     3661 tgaatatagt gcaaatgtaa tgaatgatta tatgcttgat gaaagcggtt ctaatgtaaa
     3721 ttttgaaaat ttgaaagcaa aaattttata tgaatgttca actcagatta gtgaaaaaga
     3781 ttttgagaat ttaagcgtca ttgaaatgca agataagcta agtcaaattc ttgaaaattc
     3841 ttataacgaa aagatgtcaa gacttgggat taaagaattg cgtaatatag agcgtatttt
     3901 atatttgcaa gttttggata atgcttggag agagcatttg tatcaaatgg atattttaaa
     3961 aacaggaata gggcttcgtg gatacaatca aaaagatcct cttgtggaat ataagaaaga
     4021 aagttataat cttttcttgg agttggttaa tcgtattaaa tttgatagta ttaagctact
     4081 ttttagcgtg caatttaatc aagaagaggt gcaaaattta gaaaataaag ccaatgaaga
     4141 aaatgaaaag ctacttcaaa gctcagtaga aatgggcgca agcgaagata atcttggcga
     4201 agctgagttt aaaaaagttc cacgcaatgc tccttgtcct tgcggaagtg gaaaaaaatt
     4261 taaagaatgc catggaaaaa gtggtcctaa gcaaggaatt ttagcttgaa taaaagcgtt
     4321 ttaaaatatt tactttttaa atatttaaga tttgataaag aacaaccctt tatcaatctt
     4381 tctatgcttt tggccttttt aggagtttgt gtaggacttt gcgttttgct tgtagctatg
     4441 gcaattatga atggttttga taaagaattt gaaaaacgct tttttgtgat gaattatcct
     4501 attactattt tgcctaaatt ttacgctcct gtaaatgatg aatttataga tgagttaaga
     4561 aaaacatttc caaatttgtt atttagccct tatataagca ctcaagttgt tgtaaaggga
     4621 gataatcgtt ttgaaggtgg tgtgcttttt ggcgttaatt ttaatgatga aaaaaaaata
     4681 aacgaagtgg ttgctaaagc tttaagggat gagaatttaa gtggttttga tatacttgta
     4741 ggatcagcac ttattgatga atttggtttg cataaaaatg acaaactttc acttattttt
     4801 tcaaatctta atcctagtgg attttcttta gtaccacaaa ctaaacgttt tgatgttaaa
     4861 gcgcgtttta cttcagggct tgcattttat gataaagctt atatgtatac agatgttgat
     4921 gcattgaaga aagtacttgg aatgcctaaa aatccaaatt atgatggaat tcatgtatat
     4981 agcgataatg cttttaagga tgttgaaaaa attaaatctt atttaaaaga tgattatgct
     5041 gtagtaggtt ggtgggaaca aaataaaaat ttcttttcag ctttagagct tgagaaaaga
     5101 gcgcttttta tagtgttgat gcttattatt ttggttgcaa gtttaaatat agtaagttct
     5161 ttattgatga tagtgatgaa tcgtcgcagt gaaatagcac ttttacttgc cctaggtgca
     5221 agcaaaaatg aggtaaaaaa gagttttttt gccttaggta tgcttattgg tggtggcggt
     5281 atgatagtgg gtgtggtgct tgcatttttt gctttatggc ttttaggaaa ttttgatatt
     5341 gtaactttac ctgctgatgt ttatggaacc agtaaattac cacttgattt gtctttaatg
     5401 gatttttctt taaccattgt gggtgcttta ataatcatag ctttatcatc tttttatcct
     5461 gcaaaaaaag caactcaaat taatatttta gatactttaa gaaatgaata aattgtaatt
     5521 ttggagattt ttattgtctt tgtttactca aaaaaataag aattttaaac ctttaaaacc
     5581 tctatcaaag tcaaaaataa tcactaattt aattcttttg attttatttt taatattgtt
     5641 ttgttattgt agttttagta taagtgctta tcattttgat tttagcgtaa ttgcgaccta
     5701 taaagaaaaa tttcttcaag gttttttaaa tactttaata atcagttttt tttctttatt
     5761 actgagtata attttgggtg gagttttttg tgctttttct ttaagttcaa ttgttttttt
     5821 aagattttta tctacatttt acatagagct tatcagagga acccctttac tagtgcaggt
     5881 attattgatg tattatatca ttgcaaataa tttaggactt gataatcgat atgtggctgg
     5941 agttattatt ttatcatgtt tttctgctgc ttacttagct gaaatattta gagctggaat
     6001 tttaagtatt tctatatctc agcttgagag cgctagggct ttagggttaa aagagatgca
     6061 ggtttttgcg tatgtaattt ttccccaagc tttaaaaaat attttagcac cgctgagtgg
     6121 acaatttgca aatttaatta aagatagttc cttattaagt gttattgctg taaatgaatt
     6181 aacccaaagt gcgcaagaga taaattctta tacttttgct actcttgaag cttatgtaat
     6241 tttggctatt acatatctta ttttgacttt acctataagt atattttctc gttatttgga
     6301 gagaaaatgc caaaaatgat ttaaaaaagc ttgacaaata gagctaattt tggcataatc
     6361 acatttttat ttcagaaa
//
LOCUS       DARBAC010000093         6153 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.093, whole genome shotgun sequence.
ACCESSION   DARBAC010000093 DARBAC010000000
VERSION     DARBAC010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6153
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.093"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            20..763
                     /locus_tag="SB799_001406"
     CDS             20..763
                     /locus_tag="SB799_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HEG0868637.1"
                     /translation="MTIDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTK
                     EGVIFSYENMLITLNLIKNPIPNHEAEYYANFNFMWKDALEQTKKHKAHLLIAVLSQD
                     QSKLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYV
                     SVYPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKD
                     ILKFEDGKEIKFIKSQGISVENESLKIIF"
     gene            828..1244
                     /locus_tag="SB799_001407"
     CDS             828..1244
                     /locus_tag="SB799_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HEG0868638.1"
                     /translation="MKAKLTLLALLGATVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGDWKEVDGKYKALPHTILPSVMKKVSATQPNA
                     QILEIDKEINGYKFKFNNNMKVYTDMQGNVLGQKLD"
     gene            1504..2754
                     /locus_tag="SB799_001408"
     CDS             1504..2754
                     /locus_tag="SB799_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEG0868639.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNSSLFTNVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGDYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGKIQGK
                     FAQTLTAIITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFILVMGIVAISAAIHDLL"
     gene            2769..4133
                     /locus_tag="SB799_001409"
     CDS             2769..4133
                     /locus_tag="SB799_001409"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEG0868640.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLC
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAQLEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEIRAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKAIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(4141..4662)
                     /locus_tag="SB799_001410"
     CDS             complement(4141..4662)
                     /locus_tag="SB799_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868641.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDAL
                     NLNNEIFFYQSLKEGLFKENDEILVSNLGKKIILFRNFTQNCDNFNEAKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLVFLMICLLLLVMGVINLGLLFKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(4643..5653)
                     /gene="ribD"
                     /locus_tag="SB799_001411"
     CDS             complement(4643..5653)
                     /gene="ribD"
                     /locus_tag="SB799_001411"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEG0868642.1"
                     /translation="MSNFKIQGRQMKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKN
                     GKILAIKAHEKAGLAHAELNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSI
                     AFVTLEPCSHQGKTPPCAKLFSELGFKKIFISVKDENKIASGGAEFLKKQGIEIEFDI
                     LKEEGKKLLKPFLKWQKEQFKLFKLALSMNGSPFGKIVSNELSRTYAHKIRAVIDLLV
                     VGGETIRKDHPILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEA
                     KFLMYEGGENFLKTFKDEIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIY
                     EL"
     gene            complement(5858..5945)
                     /locus_tag="SB799_001412"
     tRNA            complement(5858..5945)
                     /locus_tag="SB799_001412"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5909..5911),aa:Ser,seq:tga)
     gene            complement(5967..6040)
                     /locus_tag="SB799_001413"
     tRNA            complement(5967..6040)
                     /locus_tag="SB799_001413"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6006..6008),aa:Cys,seq:gca)
     gene            complement(6059..6147)
                     /locus_tag="SB799_001414"
     tRNA            complement(6059..6147)
                     /locus_tag="SB799_001414"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6111..6113),aa:Leu,seq:taa)
BASE COUNT         2020 a          843 c         1045 g         2245 t
ORIGIN      
        1 aaatttaata gggtttaaca tgactataga tttaaatcac aattttacct cttttgttct
       61 tcttgatgaa gttgatttta atttttcgga gttaaaaagc attttagaag ataaatttaa
      121 tataaaaata gctgatgaaa attttaccaa agagggagtg attttttcat atgaaaatat
      181 gttgattact ctaaatttga ttaaaaatcc tatacctaat cacgaagcag aatactatgc
      241 aaattttaat tttatgtgga aagatgcctt agagcaaact aaaaaacata aagctcatct
      301 tcttatagcg gtgctaagtc aagatcaaag caaattagaa caagctaaaa tgtttacgaa
      361 aattgcagct ttatgtttgg ataataaaca tgctttaggt ttttatacag gtgcagttgt
      421 tttagagccc agtttttata tagaaaatgc aaaaatgtta gatgataatc gcttgccggt
      481 atataattgg atatatgtta gtgtttatcc tagtgaaaat ggagttaatg cttatactta
      541 tgggcttaga aattttgata aattagaact tgaagtttgt gatttaaaca tagaagaaaa
      601 agaacttttc ttttgtattt atgatattgt tttgcatatt ttaacttatg atattaatct
      661 aaaagataaa gatattttaa aatttgaaga tggaaaagaa ataaaattta taaaaagtca
      721 aggtataagt gttgagaatg aaagcttgaa aattattttt taagtttcac attcacttca
      781 cagttttgag ttaaactttc gccaaccaag acaaaaaagg agaaactatg aaagcaaaat
      841 taactttact tgctttgttg ggtgctacgg tgcttttagc taaagatatg gttgttcctg
      901 ctagcgaact tccaaataat gccaaagaat ttatttctaa aaattttaaa accgctcaaa
      961 ttggtttggt gaaaaaagat atagattctt atgatgtaat tttaaatgat ggaactgaaa
     1021 ttgattttat gatcaatgga gattggaaag aagttgatgg aaaatataag gctttaccac
     1081 atactatttt acctagtgtt atgaaaaaag taagtgcaac tcaaccaaat gctcaaattc
     1141 ttgaaataga taaagaaatt aatggttata aatttaagtt taataataac atgaaagttt
     1201 atacggatat gcaaggaaat gtcctaggtc aaaaattaga ttaatttttg aaaatttaac
     1261 tctcttagaa aatttgatgc aaaaatttgg aagcatagtc ttccaaattt ttattttttg
     1321 attgcaaaac ccaaaatata tttagtttta aaataatact ttattgatac aagtgattgt
     1381 ttttttataa aattaaattt acaaaatgtt acataagatt taaaatattt tttttaaaaa
     1441 ataattattt ataaatattt tgctaaaata aaaaagatgt aatcttaaat ttaaggaaga
     1501 ataatgaata ctcctaaatg gactagtcac gatacaaggt gggttttatc tctttttgga
     1561 acagctattg gagctggcgt acttttgtta cctattagtg ctgggcttgg tggattgata
     1621 cctttgttag ttatacttgt tttagctttt cctatgactt acttagctca tagaaattta
     1681 tgtcgctttg tgctttcaag ttctaatcca aaagatgata ttacttttgt tgcagaaagt
     1741 tattttggca aaggtggtgg atttttaatt acacttttgt atttttttgc tattttacct
     1801 attttattgg tttatagtgc taatcttaca acaactttgc ttgagttctt aatcaatcag
     1861 tttaatttca atgcagatct tactcatgct gctcgttggt gggtgagttt tttgattgtt
     1921 ggagttttgg ttttgatttc tattcttggt gaaaatgttg taacaaaagc aatgagtttt
     1981 cttgtttttc cttttattat atttttattt attttttcat tgcttttaat tccacaatgg
     2041 aattcatcat tatttacaaa tgttgatttt tccgtaattt caacaagtaa tttttgggtt
     2101 actttatggc ttgttattcc tgtgatggta tttagtttta atcactctcc tattatttct
     2161 tcacttgctt gttattgtaa aaaagaatat ggtgattatg ctgagcctcg cgctagaaaa
     2221 attatttctt tggcaattat tcttatggtt tttgttgtaa tgttttttgt tttttcttgt
     2281 gctttaacct ttacaccaga agattttgca tcagcaaaag atcaaaatat caatattctt
     2341 acttttatag caaataaatt tcctgaagtt tctttactag cttatgttgg gcctattgtt
     2401 gcgcttgtgg ctattagcaa aagtttctta gggcattatc ttggttctca agaaggctta
     2461 aatggtattt tatataaagc aagtaatggt aaaattcaag gtaaattcgc tcaaacttta
     2521 acagcgatca ttacctttgc tattgcttgg cttgttgcgt ataaaaatcc aagtgttata
     2581 ggaattattg aggctattgg tggtcctgtt ttggctattt tgcttttctt aatgccactt
     2641 tattgtattt atcgttttga tattttggca agatttcgta ataaattttt agatcttttt
     2701 attttggtaa tggggatagt tgcaatttct gctgcaattc atgatctttt ataaattaag
     2761 gataaaaaat gagtaattta agcattttta aaataggtgt tggtccttct tcttctcata
     2821 ctttagggcc tatgcttgct ggaaatttat tttgtaaaaa agtcgctaaa aagcttgatg
     2881 aaattgatag agttgaggtt actctttatg gttctttgtc attaacaggt aaaggacact
     2941 tgagtgataa ggctgtaatt tgggggttaa atggcctaga agctaaaaat ttaagcgcag
     3001 caatacaaga tgaagtaaat aaaaatgcta ttgaaaatgc tcaaattgat ttttgtggtg
     3061 agaaaaaact ttgttttaat tatgaaaaag atttgatatt ttccaaagat tttttacctt
     3121 tacatgagaa tggtatgaag attaaagctt atgattgtaa aggtgggtta gtcgatgaag
     3181 aaacttatta ttctgtaggt ggaggctttg ttttaacagc tgcacaatta gaaaaaaaag
     3241 gtaaaaattc caaccaaaat aaaaagaaaa aactagatat agagcttaac aatgcaaaag
     3301 aagctttaga gctttgcgat aaaagagatt gggatttagc agagctttct tatcgttatg
     3361 aattgcaatt tcacactaaa gaggaaattc gtgcttattg tcttgaaatt tgggaagtaa
     3421 tgcaagaagt gtattataat ggtacgcatc caaatgaaga ttatttgccc ggaaaacttc
     3481 atttaaagcg tagagccaaa ggacttaaag aaagagtggc gatgacagct gatcctatgg
     3541 gcattataga ttttatttct ttatatgcta ttgcgattgc tgaagaaaat gctagcggag
     3601 caaaagttgt aaccgcgcca acaaatggag catgtgctgt tatccctgct gttatgcttt
     3661 atcttaaaaa tcatactata ggttttagtg atgaaaaggc tatagagttt ttattaacag
     3721 caatgcttat aggttctttt tataagaaaa atgcaagtat tagcggagca gaagcaggtt
     3781 gtcaagcaga aattggtagt gctagttcga tggcagctgc ggctatggca acagttttag
     3841 gggctaatgc ttttaaagca tgcaacgctg ctgaaatggc aatggaacat catctaggtt
     3901 taacttgcga tccagttgca ggacttgtgc aaattccttg catagaaaga aatgcctttg
     3961 gagctattaa ggctataagt gctgctagaa tggcaatgac acgcaaatct actcctatgg
     4021 taagccttga tgaggttata gaaaccatgt atgaaacagg aaaagatatg aattataaat
     4081 acaaagaaac ttctttaggt ggtcttgcta caaatttaaa aacagtatgc taaagtgttt
     4141 ttacacttta gtgtattttt tcattctttg acttaaaaat tctttcattt cttctttgga
     4201 aaaactttta agaatacgaa tttgcttaaa aagcaagcca agattgatca ctcccatcac
     4261 taaaagcaat aagcaaatca ttaaaaaaac aagatctatg gctccaaatt cattaatcat
     4321 agccaaactt gcaaaaaata cactcgctaa taataaaaaa aataaaagca atatttgttt
     4381 taattttgct tcattaaaat tatcgcaatt ttgagtgaaa tttctaaaaa gtatgatctt
     4441 tttacccaaa tttgaaacta aaatttcatc attttcttta aataagcctt cttttaaact
     4501 ttgataaaaa aagatttcat tgtttaaatt taaagcatct ttgtagcttg ataaggtgta
     4561 gtctttgtaa aaaaaggatt ttaattcatt tttcttttct attttaaata atcttaaatc
     4621 atttctcgca taaaaaaatc cactaaagtt cataaatgcc ataagtatca ctccctaaaa
     4681 aattcctata aagtggcttg aaatttaaag gtattgtaac atttttttca tcatttaaac
     4741 ttgaactttg gaaaatcaaa aacatatcta tttcatcttt aaaggttttg agaaaatttt
     4801 ctccaccctc atacattaaa aatttagctt cacttggaat ttgggtataa atttggcggt
     4861 ttggaacttt aaataaaggg atatttttat caaaattatc tatattttga cggcttaaga
     4921 tacaaagatt aggcgctttt gctttgcaaa gcctagcatc tagtatagga tgatcttttc
     4981 ttatggtttc tccaccgact acaagcaaat caatcaccgc tctaatttta tgtgcataag
     5041 tgcgacttag ctcattgctt acgattttgc caaaaggcga gccattcata gaaagggcta
     5101 atttaaaaag tttaaattgc tctttttgcc attttaaaaa aggttttaaa agtttttttc
     5161 cttcttcttt aagtatgtca aattcaatct ctatgccttg tttttttaaa aattcagccc
     5221 caccacttgc gattttattt tcatctttaa cgctgatgaa aattttttta aaacctagct
     5281 cgctaaagag ttttgcacaa ggaggcgttt ttccttgatg agagcaaggc tcaagtgtga
     5341 caaaagctat gctatcttta aatacacctt gatggttttt gcaaataaac tcatgcaagg
     5401 cgtttgcttc tttaggcaat gaaatttcag gtcttaagct tttaaaagca tgagctatgg
     5461 cattaagttc cgcatgagct aatccagctt tttcatgagc ttttatggct aaaatttttc
     5521 catttttatc taagattaca cagcctacag ccggatttgg ataggttaaa aactgatatt
     5581 tccaagcctc atttaaggct aaattcatat aaaattcttt catttgccta ccttgtattt
     5641 taaaatttga catattttta aaattttata tttttgtttt aagataacaa attctaaatt
     5701 ttccatttgt atttcttatt tttaattata ttagccatag tttttctaag ttttttagga
     5761 tataacaaaa atagtaagac cgaagtatta tttttcattt gtagtatcct ttataatttc
     5821 aggaatgata taagcttgat aaactagaaa gtcttggtgg ccgggagaaa gggattcgaa
     5881 cccctggagg tgtgaccctc aacggttttc aagaccgccg ctttcgacca ctcagccatc
     5941 tcccgataaa gtaaagtttt gccttttgga ggcgacatcc ggattcgaac cggagatcaa
     6001 ggctttgcag gcccatgcct taccgcttgg ctatgtcgcc ctgataatgt tgaaaaagtg
     6061 gtgcccgagg ccggacttga accggcacgg aagaaaaatt ccgagggatt ttaagtccct
     6121 tgtgtctacc aattccacca cccgggcggg tga
//
LOCUS       DARBAC010000094         5706 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.094, whole genome shotgun sequence.
ACCESSION   DARBAC010000094 DARBAC010000000
VERSION     DARBAC010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.094"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..367
                     /locus_tag="SB799_001415"
     CDS             <1..367
                     /locus_tag="SB799_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868643.1"
                     /translation="NIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNPTLSY
                     KIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSGREFEDFYILSRFEFLAL
                     IEGIQAPSLKNHTLKVSLI"
     gene            364..747
                     /locus_tag="SB799_001416"
     CDS             364..747
                     /locus_tag="SB799_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEG0868644.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIHTAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            740..1423
                     /locus_tag="SB799_001417"
     CDS             740..1423
                     /locus_tag="SB799_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HEG0868645.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPPKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALIAAEA
                     LSNYALKAYAIELDIKAYKIALENAKNIDPNLEVIHANTFEILPKLIENSKNEIILYL
                     DPPFDIREGFSDIYEKIYHFLENLDLKTLNLIIFEHHSTIKTPEKIQNFQKVKEKKFG
                     STSLSFYSS"
     gene            1482..2528
                     /locus_tag="SB799_001418"
     CDS             1482..2528
                     /locus_tag="SB799_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEG0868646.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            2528..2869
                     /locus_tag="SB799_001419"
     CDS             2528..2869
                     /locus_tag="SB799_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868647.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            2932..3129
                     /gene="flgM"
                     /locus_tag="SB799_001420"
     CDS             2932..3129
                     /gene="flgM"
                     /locus_tag="SB799_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HEG0868648.1"
                     /translation="MINPIQQSYVANTALNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3174..3608
                     /locus_tag="SB799_001421"
     CDS             3174..3608
                     /locus_tag="SB799_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HEG0868649.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFNINDGTNNAYGDKKTNPESIFKINV"
     gene            3618..5444
                     /gene="flgK"
                     /locus_tag="SB799_001422"
     CDS             3618..5444
                     /gene="flgK"
                     /locus_tag="SB799_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEG0868650.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNNDHNANNDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASNMKVKDSILNDPSTVRASLSGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            5461..>5706
                     /locus_tag="SB799_001423"
     CDS             5461..>5706
                     /locus_tag="SB799_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2400 family protein"
                     /protein_id="HEG0868651.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFIAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKN"
BASE COUNT         2238 a          859 c          947 g         1662 t
ORIGIN      
        1 taatatagct ttttatggtt ttaatgcttg cgatacttta aaatccaaac ttaaggctaa
       61 atttatttcc tatgaaaaca gtataaaaaa taatggcttt agcttgctta atctaaatcc
      121 tacgctaagc tataaaatag ccgcagatat tgttttggac gcttatgata gcggggctga
      181 ttttatggta gtaaaagaag aaaaagattt ttatcttttt gatacttgtg ctaaaaaact
      241 tatgcaaaca agtggaaggg aatttgaaga cttttatatt ttgagccgtt ttgagttttt
      301 agcccttatc gaaggcatac aagctccatc attaaaaaat cacactttaa aggttagttt
      361 gatatgaaaa tctctttaga atgcaaagat ctcatcatag aaaaaacttt agaacttttt
      421 ttaaaagatc atttggtaat gaaaaaaaat tgtgatttca tcattagcga tgaaaaaatt
      481 cataccgcaa aacccttatt tatcatctct aaaaactctc catttttaag cataccattt
      541 agcaaagaag ccttgtttga gtctttaaat gaatttgata atgccttaaa agcagcagct
      601 ttgcaacttg cacttgaaca aaaacgactg cttgaagaaa aaattgacgc tattgctttg
      661 gaatttaaaa aagattatga aaataaaatc gatcttgcca taaaagatct taaaaacaaa
      721 ctcgtaaaag cacttaatga tgaatgatga atttataagc gttaaagact tttttaatca
      781 caatgaaaaa agaaaaaaat ttcttcaaaa acaagaaatt aaacctccta aagaaaaaac
      841 aaaaaaaact aaagaaacaa agctttatac aaatatagaa agtggtaaat acaaagggaa
      901 aaaactactt ttacctagtc ttacaacaac aagaagtact aaaagcatag tcaaaagttg
      961 tgtttttaat gtaataagag aagatttaag aagtaaaatt ttcattgaag cctttggcgg
     1021 aagtgcttta atagcggctg aagcactaag taattatgct ttaaaagctt atgctataga
     1081 acttgatata aaagcttata aaattgcttt agaaaatgct aaaaatatag atccaaattt
     1141 agaagtgatc catgcaaata cttttgaaat tttacctaaa ctcatagaaa attcaaaaaa
     1201 tgaaatcatc ttatatcttg acccaccttt tgatatcaga gaaggtttta gtgatattta
     1261 tgaaaaaatt tatcattttt tagaaaattt agatttaaag actttaaatt taatcatttt
     1321 tgaacaccac tcaaccataa aaactcccga aaaaatccaa aattttcaaa aagtcaaaga
     1381 aaagaaattt ggatcaacta gcttaagttt ttactcttct taactcactt ggaacacttt
     1441 ttgcttgatc tatcatcaac aatagattaa aggaagaatc catgagagtt ttaacgatat
     1501 ttttactctt tatgacaagc atttttgcag tgcaaatcaa ggatgtagca aatactgtag
     1561 gtgtaagaga taaccaactt ataggttatg gacttgttgt agggcttaat ggaagcggcg
     1621 atggaacaag ctctaaattt acactacaat ctatctcaaa ccttttgcaa ggtatgaata
     1681 tcaaagtaga tcctaatgat atcaaatcaa aaaataccgc agctgttatg gttacagcca
     1741 aacttccagc ctttgcaaaa agcggagata aacttgatat taccgtttca tctatgggtg
     1801 atgcaaaatc tttacaaggt ggaacacttt tactaactgc acttcgtggg attgatggtg
     1861 aaatttatgc tatagcacaa ggctctatct caacaggagg tttaacacct agaccaggag
     1921 gagcaggttc tcactcaact gctgcaactg taatgggcgg agctaatgta gaaagagaaa
     1981 ttccacaaaa ttttagccaa aacaatgatc taaccttaag tttaaaagta gcggatttta
     2041 aaaccgcaaa cgatatagaa agagttttaa atactgtctt tggcgaagaa gtagctaaag
     2101 ccatcgactc tcgcacagta aaactcaaaa aacccgaaga tctttcaaat gttgatttta
     2161 tggcaagagt tttagaacaa gatatagctt ataaaccaca aagcaaagtt atcatcgatg
     2221 aaagaacagg aacagtgatt gctggagttg atgtagaggt agaacctgtt ttaatcactc
     2281 ataaagatat cactataaaa atagatccaa acaataacgc agtagctaat caaaatgaaa
     2341 tcgatatgaa agatggtggt tttgtagatc caagttcaaa taccttaaga atcaacaatg
     2401 ccaaaagcac agttgcaaat atagctagaa tgcttaacaa acttggagca accccaaatg
     2461 acattatcgc tattatggaa aatttaaagc gcgcaggtgc aattaacgcg gatttggaga
     2521 tcatctaatg aaagtggata attttttaaa tacttatagt atgaatagcg ctttacttga
     2581 tcgtgcagcc aaagcaagaa gtttagaatc aagcatcaaa ataaatgaca atgatatagt
     2641 tacaaagagc aaagaagatg aagccttaaa agaacaaacg gatgcttttg aggcattttt
     2701 tttaaagcaa gttttagatg tatctttaaa aagtcaaaat tcactctttg gaaaagatgc
     2761 cagcgatgaa atatactctt ccatgtataa tgataccatg agtaaagctt taagtggagg
     2821 tatgggtttt tcaaaattat tatacgattt tttaaaagaa aggggttaag ttttttaaat
     2881 ttaggtcgat atggtttgta gaggattata actaagatca aggaggcaga aatgatcaat
     2941 cctatacaac aaagttatgt ggcaaatacc gcattaaata caaatagaat agataaagaa
     3001 actaaaacaa acgatactca aaaaacggaa aatgataaag cgagtaaaat cgcagagcag
     3061 attaaaaacg gtacttataa aatcgataca aaagctacgg ctgctgcgat tgctgactct
     3121 ttaatctaaa aactttcatt ctcctttttt tgagagagag aaaaggagaa aatatgctta
     3181 aacaaagact tgatgaagta aatgctatct tagcaaaact tattgcttta accgaagaag
     3241 atatagaaaa tatcaaagtg gctaaacatg agagtgtaac gccaagtgta gaagaaaaaa
     3301 acaaacttat cgcggaattt attacagcta aaaaacaact tgatgttgcc ttagttgagc
     3361 taaataatag ctctacaaaa gggcttagtg aactcttaga tgatgaagat aaacaaaaac
     3421 tagatctact taaaaaaaat cttcaaaacc ttcatagtaa aaacaaagag tatgctaaat
     3481 ttgttcttat tgtcaaagat tttcttgatg gcttagtaaa taaaatgttt aatatcaatg
     3541 atggaacaaa taatgcttat ggagataaaa agacaaatcc agagtcaatt ttcaagatca
     3601 atgtataagg atttataatg ggtatttttg gaacattata cacaggtgtt acaggcttaa
     3661 aggcaagcga agttcaaatc gcaacaactg gaaataatat ctcaaatgct aatgcaactt
     3721 tttatacacg ccaaagagtg gtgcaaacta caaatggata tattacaaca ggtggagttc
     3781 aagtaggtac aggaactgct gtagaaagta tagtgcgttt gcatgatgag tattcttact
     3841 ataaattaaa aggtgcatct actcaactag aatatactaa atatatggct tccactttac
     3901 aagaaattgc gcagcgtttt cccgacttac aaaatactgg aattttgcaa gatttagaaa
     3961 attataacaa agcttggaat gattttgcat ctaaccccaa cgaaaatgcc acaaaaatag
     4021 cccttgtaaa agcttctcag accttaacag aaagcgttaa taacactttt gcaaccttag
     4081 ataaaatcca aaaaaaagta aatgatgata ttaaaaatac agttgatgag attaatagaa
     4141 ttggcgaaga aattgctact ataaataaac aaatttatgg acaagaagcc ttaccaacag
     4201 aacacgcaaa tgaacttagg gatagaagag atgaacttga gcttactctt tcaaagctag
     4261 ttagtgcagt tgcaagcaaa aatgaaatca atcaagacaa tcgccttgat acaaccatca
     4321 ctgatccagg acatcaatac aatctaagta tagaaggttt tagtatagta gatggaataa
     4381 attttcatcc tttaaagctt gattatgatg ataaaaataa atcttatagc atttattatg
     4441 aaactcctga tgaaaaagtt cgcgatctta ctgcaaaaat tagcggtgga cagcttggtg
     4501 ctcaacttga cttacgcggt agaaactata gcaaaagcga aggaaaatat gaagatggaa
     4561 ttatccaagg ttatatggat tctttagata cttttgctaa gaccatgatc aatgaaacta
     4621 acaatcttta tgcaagttct gcgaaaagtt ctgttacttc tgattatcta tctgggctta
     4681 agggagatat tcctttagtt aattacgata gaaccataca accaggaagt tttgatatag
     4741 tcatttatga tgataaaggc gataaaaaac tcaccaaaac catcaccata gatgtaaata
     4801 caaccatgaa tgatatcatg cgtcaaatca atgctaacac agatgataat aacgaccata
     4861 atgcaaataa tgatgttgat gatcatatca atgcaagttt tagctacgat gcaaaaactg
     4921 gagatggttt atttcaaatc aatgcaaaat caggttttaa ggtagccatt gaagataagg
     4981 gcacaaattt cgcaggtgcg tttagcatag gtggtttttt cagcggaact gatgcaagta
     5041 atatgaaagt aaaagattcc atcttaaatg atccaagcac agtaagagca agtttaagtg
     5101 gggttgatag tggaaatgac atggcaaata aaatcatcca acttcaatat gaaaaagtta
     5161 atttttataa tgaagatggc actatcgata atcttaccat ggaagaatat taccgcaaac
     5221 ttacaggtaa aatagcctca gatggtgaaa ataacaatgt cgtcaattca agcaatgaaa
     5281 ctctttataa ttctgtttat agcgagtacc aatctaaaag tggcgtaaat acaaatgaag
     5341 aattagccgc ccttatacaa tatcaatcaa gttacggtgc agcagcaaaa atcgtctcta
     5401 ccgtagatca aatgcttgat accttactag ggcttaaatc ttaagctcta gtaatatcaa
     5461 atgaaaaatt ttatccatct taaagctaag cttgattttt tagccaatca aaaaaatacc
     5521 aatcattccc tttttgaaac tccagatcct ttgcaaattg ctaaaattca caatgatgaa
     5581 tttattgcct taatttgtgc tttatttgcc tatggaaatg ctaaaaatat agtaaatttt
     5641 ctaaagaaac ttgatttttc tttattaaac cttcaagaaa aacaaataaa aaaagaactt
     5701 aaaaat
//
LOCUS       DARBAC010000095         5700 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.095, whole genome shotgun sequence.
ACCESSION   DARBAC010000095 DARBAC010000000
VERSION     DARBAC010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5700
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.095"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            1..1155
                     /locus_tag="SB799_001424"
     CDS             1..1155
                     /locus_tag="SB799_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEG0868652.1"
                     /translation="MLLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALTSYVLKKDL
                     KNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQPKYQQNLNL
                     VYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFKIGFLFKAK
                     QNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFITNKDN
                     NVFLDTIAINGAKSDLWLSWNQTVVKKELGLLHNDLIILAYGSNDALFKGFEKQKFKN
                     NLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEVAKEEKTLI
                     FDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY"
     gene            complement(1158..2528)
                     /locus_tag="SB799_001425"
     CDS             complement(1158..2528)
                     /locus_tag="SB799_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEG0868653.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYK
                     SYDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMKELYSYKYKLGKIEELDLLNIEQSLLRAKQNLLSN
                     DQNRNLLIKNLQDLLAKQEGFVYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQNINIKQEFI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDEN
                     LEFLKY"
     gene            complement(2530..4455)
                     /locus_tag="SB799_001426"
     CDS             complement(2530..4455)
                     /locus_tag="SB799_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEG0868654.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYIFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKKLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALMNGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNAQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLTLKTMSKEKKTLTLLKNQAFECFKIAYSSILAHKLRSVLTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGRGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFF
                     PARNAANLNPISALSKE"
     gene            complement(4455..5627)
                     /locus_tag="SB799_001427"
     CDS             complement(4455..5627)
                     /locus_tag="SB799_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEG0868655.1"
                     /translation="MKKKIVLIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSS
                     SSSSSSSSSNAIYYYAKFYVPNKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPK
                     GYYVEILENQKAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADGLAPKVKLRF"
BASE COUNT         1955 a          998 c          719 g         2028 t
ORIGIN      
        1 atcttattgt tttttattat ttttactagc tcttatgcac aaaatttaaa tacaaatgac
       61 acaatagatt ccatactcaa tcaaaacaaa aatcactctg ctttaacaag ttatgtatta
      121 aaaaaagatc ttaaaaatct agaaaaaaaa ttagaaaaaa atcaaaacat aggaattaga
      181 atttatggag attctcatat ggcggctgat ttctttccgc gtgtcataag aggatattta
      241 atccgctcta actctatagg ttttgcctat cctttacagc ctaaatatca acaaaatctt
      301 aatcttgttt attcttataa aaactttgaa attttaaact caagaaatcc tgctaatgct
      361 ggacataatt ttccattagg tgggataata gccaaagcaa aaactaaagg cgcaaaaatc
      421 aaccttgata caaccctaga taaaaaaaat ttcaaaatag gatttttatt taaagccaag
      481 caaaatacca atgcttttag catcaaagat gcaaaaaacc aaagctatga gttaagaact
      541 acacaaatta acaaatggtc ttataaagaa ctagaacttg atcttccttt gcaaatttca
      601 gccttacaaa aagatgctga gctaggagga tatttcatca caaataaaga taataatgtt
      661 ttcttagata ccattgcaat caatggtgcc aaaagtgatt tatggctctc ttggaatcaa
      721 acagttgtaa aaaaagaact aggactttta cacaatgatt taattattct tgcctatggt
      781 tctaatgatg cactctttaa agggtttgaa aaacaaaaat tcaaaaataa tttaaaaaaa
      841 tggattagta ttttaaaaac ttacaataaa aacgctgtta tcatgctaat ctctccacca
      901 actgtagttc aaaaacaagg taaaaactac aagcttgctc ctgatttttt taccatacgc
      961 aaagcattat atgaagttgc taaagaagaa aaaactctta tttttgatat gcatcagttt
     1021 atgcaagata gtgggggaaa aaacaaatgg atagaacaaa agctttcgct caatgatgta
     1081 catcttacta taaaaggcta tgagctgatg gctaaaaagt tactcgagga tttaaaaaat
     1141 atcattgatt attaaattta atacttaaga aattctaagt tttcatcatt aaaacttaaa
     1201 gctgtgattt gatagtaaga attaatggtt tttaaaagat taaatctagc tcttaaaaat
     1261 tcttgctggg tagaatttaa agtattgttt gcatccaaat aatcttttaa ttcacttttt
     1321 cctaaaatat atttttcata atacgcctta gtgataaact cttgtttaat gttaatattt
     1381 tgcaaatttt gcaaaagcaa ggtgtcgctt tgataatctt tataattcaa tgcaaattca
     1441 ttcatcgcac tttgcaaggc ttgctcataa gaaattaaaa gttgctcata agtaaattgt
     1501 gaaattttga tattttgctt tactctacca taatctaaga aaggtaaaga aatcttaaca
     1561 ttgccactta aaatttcaaa tttaaaacta tcatcgattt ttttatcact tccgcttaat
     1621 gctccaccta aagaaatact aggcaaaata gatttttgca tggaagaata atccttaaag
     1681 gctgatttta agctattgag tttagatctc acatctgcac ggtacgctaa agcttttaaa
     1741 ggtatattaa aatcaggact taaggtttta aaatcattta aagataaagt tttaaaatac
     1801 tctatgtaaa caaaaccttc ttgctttgcc aataaatctt gtaaattttt tatgagtaaa
     1861 ttacgatttt gatcattgct taataaattt tgtttagctc ttaataagct ttgttctatg
     1921 tttaaaagat ctaattcttc tatttttcca agcttgtatt tataactata aagctctttc
     1981 atttgttcta aatttgaaag ataagctcga agcaatttat ctacatcgtt aaaataagcc
     2041 agctcaaaaa catcatttaa agctgtattg atcatgctta tttttaaatt ttcaagatca
     2101 taagcacttg cttttgcact aaattcactc gcacttgcac tatctcttaa ttttccataa
     2161 atatcaagct catagcttaa atttaaagaa ttattgaaat ttttactttg tttgcctgaa
     2221 tttaaatctt tatctccacc aaaacccaaa tttccactta aagtcggata taaatcataa
     2281 tcaatcaaat cggctctagc caaagctgaa agcaaagttt ttctagctat attaatatca
     2341 ctattattca ataaaacaaa atttagaaat tcatttaatt ttgcattatc ataggattta
     2401 taccaatcat aagtgagatt taaatctttc atttgttctt gagttaaatc aacttcttta
     2461 ggcaagctaa gttttactcc acaagcactc aagaaaaatg ctaaaaaaat gctaagtatt
     2521 attttcatat cattcctttg ataatgcact aataggattt aaatttgctg catttcttgc
     2581 agggaaaaaa ccaaaaacca caccgataaa catagaactt aaaagtccca aaagcacaga
     2641 ataagcattt aaaatcatag gaaaatcagt acttaaagta ttaaaagcaa aaataacaaa
     2701 aatcgataaa atcacaccta aaatcgcccc tatagtacaa atcataaccg cttcgattaa
     2761 aaactgcatc ataatatctt ctcttctagc ccctatagcc atgcgtatgc ctatttctct
     2821 tgttctttca cttacagaaa caagcatgat attcatcact cctatacccc caacaatcaa
     2881 agcaatcaca gccacacaag ctgtaagtat cgttgtagtg cgtttatttg ctgtaatagc
     2941 ttgcttaaag gtgtcagaat taaaagtaaa aaaatccttt tgtccgcgtt taatttctaa
     3001 aattcttatg atagcatttt cagccaaagt tgaactcaca tcatctttaa ccttaactat
     3061 gatttcacgc aaatttctat ctcctgtaag cttattcatc agtgttgtat agggtatata
     3121 aagacgcact acattatctt ctataggctt gtctgtatct ttttgcaaaa ctcctataat
     3181 cttaaaaggt tgagaattaa aaagcaccac acgacctaaa atattttcac ttttttcatc
     3241 aggaaaaaga ttttttttag cattaaaatc tagcacagca acattggtac tattttttac
     3301 atcatcatta tttaaaattc ttcccgcatc tatccttaaa ccttctatag caaaattatt
     3361 tacccccact ccttcagctc ttgcacttaa agaaatattg gtataagttg ccactcctga
     3421 agtatttgaa tgagcatcaa ctgcttctaa atattctaaa gatcttagcg tttctaaatc
     3481 actaaaatta agccttgttt tacctgaacg caaatctcca aaaccccttc caggacgaat
     3541 ttcaatagta tttgttccaa gtcttgcaat agactcaagc accttagctt gagaacccaa
     3601 tcctaaagct acaacgcaaa ctacagaagc aatacctatg atgattccaa gcatagttaa
     3661 aacagaacga agtttgtgtg caagtatgga agaataagct atcttaaaac actcaaaggc
     3721 ttgattttta agcaaagtaa gtgttttttt ctctttagac attgttttta aagtgagttt
     3781 ttcttgagct ttttcctttt tagtatcgct taaaatttct ccatctttaa tctctataac
     3841 ccttttagct tgtgctgcaa tttttggatc gtgagttact aagactatag tatggccttg
     3901 tgcgttaagt ttttgtaaaa tttcaagcac cataatgccg cttttactat ccaaagcccc
     3961 cgttggctca tcagctaaaa taagctctcc accattcatc aaagctcttg ctatagaaac
     4021 gcgttgttgc tgtcctccgc ttaattcatt tggtttagaa tctaacttat gagctagttc
     4081 taaatcattt aaaagttttt tagcgttttg acttctttct tgtaattttt ttcccgcata
     4141 aactgcaggt aaagaaacat tttctttagc gctaagcaag cttaaaagat tatatctttg
     4201 aaatataaag cctatttttt cacgccttaa tcttgctttt tcatcattat taagtttagt
     4261 gacttcatat tcatcaaaaa tataagttcc actacttggt gtatctaatg ttcctatgat
     4321 atttaaaagt gaagttttac cacttccact ttgtcctata atggcaacaa attcaccttt
     4381 ttctatactt aaacttacat tttttaaaat ggcattttcg cctatatttt tgcaaatatt
     4441 tttaagaaaa atcattaaaa tctcaacttc actttaggag ctaaaccatc agcacttgag
     4501 cttactatca attcttcatt ttcatttacg ccttctaaaa tttgagtatt gatagaatct
     4561 ttaatgccaa gtttgacata ttttttaaca gctttttgat tttctaaaat ttcaacataa
     4621 tagccttttg gatcgctttt aattgcataa gttggcactg ctaaaacagc ctttgcactt
     4681 gctacaacaa tttcattttg tatgctcata ccaatacgca aaaaatcatc tttattaggt
     4741 acataaaatt ttgcgtaata ataaatagca tttgatgagc ttgagcttga agaacttgaa
     4801 cttgatgagc ttgagcttgt actagaatca ctcacttcag tatcagctgg atctatactt
     4861 gcaatcttag catgataagt tttttgagga tcattaagta aagaaaaatc aagctctgtt
     4921 cctactttta tcttactcac atcagcctct gctatttcca ttcttacttc catttcgtct
     4981 aaattagcta tacggactat agtaggagtg ttttgattag cattaactgt ttgtccttca
     5041 tctacagcta cattaatcac aacaccatcc ataggagcag taatggttgt ataacctaaa
     5101 tctttttgtg catttttaag agtgatttca agctgaacta cttgagcatt aagctctgca
     5161 acattagctt ttaaagtata ataattattt ttttgagttt ctaaattttc aagagaactt
     5221 gctttagctg cataaagttt ttgctctctt tgatactgct tactcgcaat ctcaagagca
     5281 acttttttac tctctaaatt agccttagca ctttcaagct gagcttttgt aatatctaaa
     5341 tcgttttgtt gtttatcttt gtcaatttga gcgatcaaat caccttgctt tacatgagtt
     5401 cccacatcca cataaagttt tataatttgt ccgctaactt gagcacctac atcgacttga
     5461 tctttggcat atacctttcc tactgcctct atggtttgag atatatcttt tttttgtatt
     5521 ttttgagtta aatagctgat tttttcatca ttattaaaaa aaataaaata agccccaaca
     5581 cttccaagta ttgcaattaa aatgattaaa acaatcttct ttttcataat aacaaatcct
     5641 aaagaaaaat caagattaaa ttttactcat tttttgtgaa ttttttgtga atttttaatt
//
LOCUS       DARBAC010000096         5684 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.096, whole genome shotgun sequence.
ACCESSION   DARBAC010000096 DARBAC010000000
VERSION     DARBAC010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5684
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.096"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..221
                     /locus_tag="SB799_001428"
     CDS             <1..221
                     /locus_tag="SB799_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868656.1"
                     /translation="FKYLASKNGKLEGQLYMYENNISKESAMGNWALDAEIKQAIANG
                     WKAKPSTINSYADSIMDRLNNLIGQTRV"
     gene            315..1085
                     /locus_tag="SB799_001429"
     CDS             315..1085
                     /locus_tag="SB799_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEG0868657.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDERKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILVPFQENPEFWGIAVQKGNAELKKE
                     LDEFIAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF"
     gene            complement(1101..1835)
                     /gene="fliP"
                     /locus_tag="SB799_001430"
     CDS             complement(1101..1835)
                     /gene="fliP"
                     /locus_tag="SB799_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEG0868658.1"
                     /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            1979..3268
                     /gene="glmU"
                     /locus_tag="SB799_001431"
     CDS             1979..3268
                     /gene="glmU"
                     /locus_tag="SB799_001431"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEG0868659.1"
                     /translation="MKTSILILAAGLGTRMKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALRGFEPKNERVLILCGD
                     MPLVEQTSLEALLSNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQEKIKKYWMQQGVIFHLPQSTFIGTDVEFMGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSVNVEKGALFINRAEHKMIKDYYYKKFQK"
     gene            3265..4419
                     /gene="coaBC"
                     /locus_tag="SB799_001432"
     CDS             3265..4419
                     /gene="coaBC"
                     /locus_tag="SB799_001432"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEG0868660.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNSLLKFAS
                     KMSFEALADEILCEENESWQNSNNHIAFSKDVDLVLFAPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGVGAL
                     AEVKDIFNITKRELLKEKFWCNKSVVITGGGTRERIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELCKFESSKDLKELLDKNLSHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            4416..5033
                     /locus_tag="SB799_001433"
     CDS             4416..5033
                     /locus_tag="SB799_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868661.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGISVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            5037..>5684
                     /gene="uppS"
                     /locus_tag="SB799_001434"
     CDS             5037..>5684
                     /gene="uppS"
                     /locus_tag="SB799_001434"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEG0868662.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNR"
BASE COUNT         2092 a          684 c         1065 g         1843 t
ORIGIN      
        1 tatttaaata tctagctagt aaaaatggaa aattagaagg gcaactttat atgtatgaaa
       61 ataacatttc taaagaatct gctatgggta attgggcttt agatgctgaa attaaacaag
      121 ccattgccaa tggctggaaa gcaaaaccta gcaccattaa ttcctacgct gattctataa
      181 tggatagatt aaataatctt ataggacaaa ctagggttta gaagttttaa ttttttaagt
      241 ttgaaacaaa ttgctaataa caaaataaga taaaattagt ataatttttt tacaaaaaat
      301 tttgaaagga aattatgaaa aaaattattt tgatttttat ctcttttttt gctttaaatt
      361 tgagtgcaaa agatttggtt gtaggaatgg agcttggata tccgcctttt gaaatgagcg
      421 ataaaacagg caaagcaagt ggaattagtg tggatttttt agaagctttt gcaaagaaaa
      481 acggctataa acttgtagta aaaaatatcg cttgggatgg tttgatacct gctttaaaaa
      541 cagccaagat agatcttatc atgtcttcta tgacaattac cgatgagaga aagaaagtgg
      601 tggattttag cattccttat gctaaggcaa atttggctat tttaactcct ttgaactctg
      661 atattacaaa tatcaaagat ttagataaaa agggcaaagt tttggcttta aagcgtggct
      721 ctacaggaca tttatatgcg gttaaaaatt taaaaaatgc aactattaat ttatttgata
      781 aagaaaatgc tgctattttg gaggtgattc aaggtaaggc tgatggattt ttttatgatc
      841 aacttacgat ttatcgcact tggcaaaaac atcaagatac aactagagcc attttggtgc
      901 cttttcaaga aaatcctgag ttttggggta tagcagtaca aaaaggcaat gcagaactta
      961 aaaaagagct tgatgaattt attgcagaaa gcaaaaaaga tgggcttttt gattctttag
     1021 gagaaaaata tcttaaagat gttaaagata cttttaaaaa gaataattta gaattctttt
     1081 tctaagaagg attttccttc ttaagttaca aagctttcca caagcctttg cactagcaaa
     1141 ttccatccat ccactaatac aaaaatcaag agtttaaaag gtaaagagat catagtagga
     1201 ggtagcatca tcatacccat agccattaaa actgagctta caaccatatc tatgactaaa
     1261 aagggtaggt agattaaaaa ccctatttca aaagcggttt taagctctga aatcataaaa
     1321 gcaggaacta aaactgtaag gggaacatca tctatggttt tgggattggg tagattgcgt
     1381 atgcgataaa aaagggctaa atctttttct cgagtatttt taagcataaa atctttaaaa
     1441 ggctttgctc cttttataaa agcctcttca tagcctattt tttctgctaa ataaggtttt
     1501 ataccttcat tataggattt tgtagctaca ggttccatga taaaaaaagt taaaattaaa
     1561 gccaaggtta ctaaaatagt gttaggtggc atactttgcg tccccatagc ttgtcgcaaa
     1621 aatgaaaata ccacaataag acgcaagaaa gaagtcataa caaaaactat acttggagcg
     1681 agcgcaagta tggttaaaac aatcactata tttaaagtag taacaagctg attaggtgta
     1741 ttgggtgcac ttaagcttaa atttactgta gggatagttg cttcagcagc aaataagctc
     1801 atgcttaaaa gtaaaaataa taatattttt ttcaaaattt aaaaaccttt tttttgtttt
     1861 ttattaaaga aatttaaatt ttatcttttg atgactaaaa actagtttaa gggtattagg
     1921 attttaactt taaactgcta aaatagtctt ttagatttct taataacaaa ggtaaaaaat
     1981 gaaaacttct attttgattt tagcggcagg attaggcact agaatgaaat cacaaaagcc
     2041 aaaggttttg caagagcttt gtcaaaaaag tatgatttta cacattttaa aaaaggcttt
     2101 tgctttaagt gatgatgtaa gtgtagtttt atcgcatcaa aaagaacgcg ttgaaaaaga
     2161 aattttagaa tattttccaa aaacacaaat tttagagcaa gacttgcaaa attatccagg
     2221 aactgcggga gctttaaggg ggtttgagcc taaaaatgaa agagtgttga ttctttgtgg
     2281 cgatatgcct ttggttgagc aaacaagttt ggaagctttg ttgagtaata atgcaaaatt
     2341 aaatctagca gtttttaaag caagagatcc taaaagttat ggcagagtgg tgataaaaaa
     2401 cgatagcgtt gaaaaaattg ttgaatttaa agatgcaaat acacaagaaa aagagataaa
     2461 tacttgcaat gctggggttt atgtgattga ctctaggctt ttaaaagagc ttttaccttt
     2521 gattgataac aataatgcgg caaaagagta ttatttaacc gacattgtaa aactagcaaa
     2581 agaaaaagat gtgatgatta aagcggtttt tgtagatgaa gatgaattta tggggatcaa
     2641 tgataaattt gaactcagta tagctgaaaa tttcatgcaa gaaaaaatta aaaaatactg
     2701 gatgcaacag ggtgtgattt ttcatttacc gcaaagcact tttataggta cagatgttga
     2761 atttatgggt gaatgcgaag tatatgaaaa tgtaaggata gagggtaaaa gtaagattat
     2821 aaactctatc attaaaagtt caagcgtgat agaaaattcc attgtagaaa atagcgatgt
     2881 ggggcctttg gcacatttgc gtccaaattg tgagttaaaa aacactcata taggaaattt
     2941 tgtagaatgc aaaaatgcaa agttaaatac cgtaaaagca gggcatttga gctatttggg
     3001 agattgtgag atagatagtg gaaccaatat aggctgtggg actattacat gtaattatga
     3061 tggggtaaaa aagcataaaa ccatcatagg aaaaaatgtt tttgtaggtt cggatacgca
     3121 atttatcgca cctgtaaaaa tcgaagatga agtgatcata gcagcaggaa gcacagtaag
     3181 tgtcaatgta gaaaaaggtg ctttgtttat caatagagca gagcataaga tgataaaaga
     3241 ttattattac aagaaatttc aaaaatgaaa accatacttt tagccattag tggcagtata
     3301 gctttttata aatcttacga gcttatttct ttgtttaaaa aagaaggctt tagggtgaaa
     3361 gttttgcttt ctaatagttt gttaaaattt gctagcaaaa tgagttttga agccttggct
     3421 gatgagattt tatgcgagga aaatgaaagt tggcaaaatt caaacaatca catagctttt
     3481 agcaaggatg tagatcttgt tttatttgct cctgcaagtg ttaattctat caataaactt
     3541 gcttttggta tagcggataa tctttttatc caaaccttaa tcgcagcaaa taaacctctt
     3601 atcattgctc ctgcggcaaa tacaaatatg tttcatcatt tcagcacgca aaattcttta
     3661 aagatactta aagaaaataa agctttgatt atagaaccta tttgtaaagt tttagcttgt
     3721 aaagatgaag gcgtaggagc cttagctgaa gttaaggata tttttaatat caccaaaaga
     3781 gagcttttaa aagaaaagtt ttggtgcaat aaaagcgtag ttatcacagg tggtggcaca
     3841 agggaaagaa tcgatgatgt gcgttgtgtg agtaattttt caagtggaaa aatggcaaag
     3901 gccatagctg atgcttttta ttttttagga gctagggtaa aacttttaag ctctgtggaa
     3961 tttgatacgc cttatgagct ttgcaaattt gaaagttcta aggatctaaa ggagcttttg
     4021 gataaaaatt taagtcatga ctttttgatt atgacagctg cagtgagtga ttttatccca
     4081 caaagtgtaa aaggaaaaat taaaaaaaat gagcatttgc agggtttaaa tttacatcta
     4141 tctttaaatg aagatttgct taaaacttgt aaatttcaag gcaaaaagat aggttttaag
     4201 atggaatttg attctcaaaa tgccttagaa aatgcgaaaa aatctttaaa agataagcaa
     4261 cttgatatgg tttgtcttaa tatcattgat caaaaaaatt attttggaag tgatcaaaat
     4321 gaactttatt ttatcacttt aaacaatgaa aataaaagca ctttgcaaag caaagaaaaa
     4381 ttggcatttg aattagtaaa atggtgtgaa aaattatgag tatgattaat tctaccttgc
     4441 ctatacaaat gaaagttttg gctaaatcag gttatggaca ttatacgctt ttgttaaatc
     4501 acaaaaagat tcaaaccaaa agcatgatag agcttgaaat tggtgctgaa tatttagccg
     4561 aactttatat gcaaaatggt ggagttatac aatttaaaca tctttcaaag cgtcctaatt
     4621 tcaaaccttt tgaagaggga ttggctttga taatcgctat tttagaggat aaaatttctt
     4681 ataaaaaatt tatcatacaa aatcttttag attgtaaaga tatagagcgt tatcagatat
     4741 taaaagaaat gctttttgca agttttgaaa atatttatca tattcctttt atctttgaaa
     4801 ataaatcttg cttatttcaa atgcgtaaaa gagcaaaata tttagaaatt tacttatatt
     4861 ttagtgtttt tggagctttg aaaattttaa tagactcgca aggcattagt gtttttacac
     4921 cttttgctaa ggtgcaaaaa tttttaaatg aacatttaga ttttaatgta tcgcaagaaa
     4981 acaagattga acctttgttt gtttttaaaa ggctttttga ttttaaagga tgaaaaatga
     5041 atgaattaaa acaccttgct gttgttatgg atggcaatag gcgctgggct agagctaagg
     5101 gttttttggc aaaacttgga tattcccaag gagtcaaaac tatgcaaaaa ttgatggaag
     5161 tttgcatgga ggaaaatatt tcaaatttaa gcctttttgc ttttagtacg gaaaattgga
     5221 agcgccctaa agatgaaatt gattttattt ttgaactttt agatcgttgt ttagatgaag
     5281 ctttagaaaa atttgaaaaa aataatgtgc gtttaagagc tataggtgat ttatcgcgtt
     5341 tggaagataa agtaagagaa aaaattacct tagttgaaga aaaaacaaag cattgtgacg
     5401 cactttgtgt taatttggct ataagttatg gtgcaagaga tgaaattata agagctgcta
     5461 agcgtgtgat tgaaaaaaaa cttgagctaa atgaagaaaa tttaacgcaa aatttagatt
     5521 tacctttaga tgtggatttg atgcttcgcg ttggaaatgc caaaaggctt tcaaatttct
     5581 tactttggca gtgttcatat gctgaaattt attttagtga aactttattt ccatctctta
     5641 ccaagagaga atttaaaagg attattaaag aatttagaaa taga
//
LOCUS       DARBAC010000097         5643 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.097, whole genome shotgun sequence.
ACCESSION   DARBAC010000097 DARBAC010000000
VERSION     DARBAC010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.097"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1088
                     /locus_tag="SB799_001435"
     CDS             <1..1088
                     /locus_tag="SB799_001435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868663.1"
                     /translation="FYNKTNFYKAKIVSKIDFKISRFKGEIRFVETKFLSKLDNEIAN
                     NFREVVFEDKVYFNKTKINTQINFKMAKFKNNVEFVNLHNNVSFNNVNFKGIVNFENL
                     NINTLNFKNVIFNNIVSFDNIRFDNNCKPNFENCTFSDQFNIEHKYIEYKFDEIEKTQ
                     EYDKLLNYRDLFRKLKSNRIAHHNLIDASELRAQELYARELELKHKENKSLKEKIERW
                     QLVFYRKLCDHHTDLLLNLKWLVVVIGLFALLYFASRMIQDISLLKALNQYGVCLSIV
                     GVFNLLCLYWFGCIKKFDFFVYLNLIVVLWVICYMPKIIFGIVNIIGDKSYNGFENAL
                     ITIYTILLALVLFSLQKTARKNSIVPS"
     gene            complement(1118..1819)
                     /locus_tag="SB799_001436"
     CDS             complement(1118..1819)
                     /locus_tag="SB799_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEG0868664.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLKEQGVKEDEINYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNEIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(1816..3018)
                     /locus_tag="SB799_001437"
     CDS             complement(1816..3018)
                     /locus_tag="SB799_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEG0868665.1"
                     /translation="MQKHTKIHGFAKFKLIIILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLANAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            3121..4470
                     /locus_tag="SB799_001438"
     CDS             3121..4470
                     /locus_tag="SB799_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HEG0868666.1"
                     /translation="MQNLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYIKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLTQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            complement(4494..5537)
                     /locus_tag="SB799_001439"
     CDS             complement(4494..5537)
                     /locus_tag="SB799_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0868667.1"
                     /translation="MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNVLNNYPKLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
BASE COUNT         2063 a          854 c          909 g         1817 t
ORIGIN      
        1 ttttttataa taaaactaat ttttataaag caaaaattgt ttcaaaaata gattttaaga
       61 tttctcgttt taaaggtgag attagatttg ttgaaactaa gtttttatca aaattagata
      121 atgaaattgc aaataatttt agagaagttg tatttgaaga taaggtttat tttaataaaa
      181 caaaaattaa tactcaaata aattttaaaa tggcaaaatt taaaaataat gttgaattcg
      241 taaatttaca caacaatgtt agttttaata atgttaattt taaaggcatt gtaaattttg
      301 aaaatttaaa tattaatact ttaaatttta aaaatgttat atttaacaat atagttagtt
      361 ttgataatat tagatttgat aataattgta agccaaattt tgaaaactgt actttttctg
      421 atcaatttaa tatagaacat aaatatatag aatataaatt tgatgagatt gaaaaaacac
      481 aagaatatga taaattatta aattatagag atttatttag aaaattaaaa agcaatcgta
      541 tagctcatca taatctaatt gacgcttcag aattaagagc tcaagagctt tatgccagag
      601 aattagaatt aaaacataaa gaaaacaaaa gtttaaaaga aaaaatagaa cgatggcaac
      661 ttgtctttta tcgcaagctt tgtgatcatc atacagattt gcttttaaat ttaaaatggt
      721 tggttgtagt gataggcttg ttcgctttac tgtattttgc ttcacgaatg attcaggata
      781 ttagcttgtt aaaagcttta aatcaatacg gagtatgttt aagtatagtt ggtgttttta
      841 atttgctttg tttgtattgg tttggatgta taaaaaaatt tgattttttt gtgtatctta
      901 atttgattgt agttttatgg gtgatatgtt atatgccgaa aataatcttt ggaatagtaa
      961 atattatagg tgataagagt tataatggct ttgaaaatgc tttgattacg atttatacca
     1021 tacttttagc tttagtcctt ttctcgctcc aaaaaaccgc acgaaaaaat tccatagtcc
     1081 caagctaagc cttaaagctt agcttgaaat ttcatcatca gtcttttaag tagtattcta
     1141 tagtagaaac cactcttatg gttttgatat aaggggtgtt tttatctctg ttgctgatgc
     1201 taaattgtcc ttgagaagcc ttttttatct tgcctagatg gctgtttgaa tcttgtgcga
     1261 attttatcgc tgcatttcta gcattgagcg ttgcttcttc tatcatttgt ggttttatct
     1321 catttagctt cgtgtaaagg tattctatat cataatcatc gatttttgtt actatgccaa
     1381 attttgcaag acttgaaatg ttttctagta tgctttttcc aagctttaca ttttgagtat
     1441 agatgagtaa attcgcagtg cctatgtatc ggtatgcagc ttgagtgtcg ttgctataag
     1501 gatcacttaa acgatctatg atatttggcg agttgtagtt gatctcatcc tcttttacgc
     1561 cttgttcttt taaaaatttg atgatatttt ctttatcttg ttctagttct tcgtataaat
     1621 ttgtaagatt gttgtttgat cttgtgaatt ttataggaag tatcaaagta tccgcttcga
     1681 cttctttttg acttaaaccc tttacgctta cacttctttc aagtgtttta aaatcactta
     1741 aagccttgtt aaatccaaaa gctagaatca aacttgctaa aactatggct aaagccataa
     1801 agatattatt tgttttcatt ttttctcctt tattttgatt agaaaatata tcatatttgc
     1861 aaccaatacg caagcacaca ttacaaaagc aaggattatc ggcgtatttg cgttaatagc
     1921 cccaaccaca aaagaaataa gccctgcaaa accaaattgc accgttccaa gcaccgcaga
     1981 agcagttccg ctatgttctt taaaccttgc catagccaaa gtcgtggtat tgggtgcgat
     2041 gaaaccaagc atagcgatac ttgtaaaaat actaagttca aaaagcaaga aatttggatg
     2101 aaaaaaggca tttgcaagta aaatcacagt cgatataaac attatcatca aagcttttgc
     2161 caaaattttt tcgctttcgt attttaaaac caatcttgca ttgatatttg cacagatgac
     2221 aaaacctaaa gcatttgccc caaaaagcaa agcaaatttt tgctcactta agctaaaaaa
     2281 ctgcgtaaaa acaaagcttg atcctgtgat ataagcaaac atcgccgcca aagcaaaaga
     2341 agcacatagt atataaacta aaaagcgttt atcgcttaaa acaaatttgt agcttttcat
     2401 cgcttcatga tgggaaaatt ttttgttttt aagatgaggt gcggactctt ttaaaccaaa
     2461 aagtatcatc aaaaaaagta aaattcctaa agcaaacaaa gtcgcaaaaa tactatgcca
     2521 tgaaaaatac tctagcaaaa ttcccccaaa agttggcgaa agcataggag caagagaact
     2581 aaaaaccatc atcaaagcaa aaatccctgc agcttctttg atctcaaaca agtcattgac
     2641 aatagccctt gcgataacca cacctgcaca acccccaagt gcttcaaaaa atctcaaagc
     2701 gataaaagca taaatatcat cgataatcac acaaaacaaa ctcgaaacga tgaagaaaaa
     2761 tatccccacc aaagctggaa ttttacgccc aaaaatatca cttaaaggcc catatataag
     2821 ctgtcctaaa gcaaaagcga taaaaaaact tgcgatacta agttgggtta aaaaagaatt
     2881 agtttgaaaa ctttgctcca catgagaaag tgcaggcaaa tacatatctg tagaaagtgg
     2941 tgctatgctt gacatcaaag caaggataat gataagttta aatttagcaa agccgtgaat
     3001 tttggtgtgt ttttgcattt gtaatcctaa ttattttaaa agaatgattt taacgagtca
     3061 atcttagaat aatctttgtt tttctatgtt aaatttaggg aaaaattcta aggaaatttt
     3121 atgcaaaatt taaaccaaaa tgaacaaatc aaatgcccaa gttgtggaag ttttatcgat
     3181 atcagcactg ctttatatgc tcaaatttta gataaagcta agcaagaaat gctaaaacaa
     3241 aaaaaagaat ttgatgatga ggtaaatgct aaaagagctg aatatatcaa agctttaaat
     3301 gatttaaaaa ctcaaaagat agaacaagaa aaactcataa acgagcaagt aagccaaaag
     3361 cttcttttag aaaagcaaaa atttgaacaa gaacttctca cacaaaagca aaatttccaa
     3421 aaagaattca gcgagaaatt taacaaagag catgaaaatg aaatgaaaat catgcaagaa
     3481 gaactcgaga aaaaaagcaa agaacttagc gagtttttaa gcataaaggc tgaaaatgaa
     3541 aggctaaaaa gagagcaaaa agaaaatgaa gaaagattga aatttcaagc caaagaagag
     3601 gcttttaaag aatttaaaga acaagaaagc aaaaatttgg aatttgaaag agaaaaaatg
     3661 cgtcttgaat ttcaaaaaag cactcaagag caagatctta aatacaaaga actagaaacg
     3721 aattttaaaa gtgtagccca aaagttagaa gacgcacaac gcaggataga gcaaggctca
     3781 cagcaactcc aaggcgaagc agccgaacta ctcatagaag aatacataca aagtgagtat
     3841 ttaagcgatg aagtaaaaga agtgccaaaa ggcgtaaatg gagctgattg tctgcatata
     3901 gtaaaggata attttggaaa tatttgtgga agtattttgt atgagagcaa acgcactaaa
     3961 gaatttaata aagaatggct tgataaactt aaactagaca gtatagccgc aaaaagtgat
     4021 atagcagttt tgatcacaaa aactatgcca aaagataaag aaaaaacgca ttttaaagaa
     4081 ggaattttga tttgtacttt taatgaattc aaaggtgttt tagcagtgct tagagaaagc
     4141 attataaacg cttataaact caaaaatgcc ctgcaaaaca aagatgaaaa aaatcacatt
     4201 ttatacgaat acttaaattc caaggaattt aacacgcaaa tcacttttat actcaaaact
     4261 taccaaaata tgaaagaaga gttagaagct gaaaaaaggg ctttgcaaaa tatatggaaa
     4321 aaaagagaaa gagctataga aaatctaagt tttaattcca ctgccatagt gagttcttta
     4381 aatgcgatat ttagcgactt acaaggtgga aatttgatag gcgaagaagg gattaaaagt
     4441 cttgaaaatt tagccaaaga tgaggattaa ttttgggcta agcccaaaat taatcattct
     4501 cctgggaagt gatttggatt tttccaaggt ccgtatttta cttttatgta ttctttaggg
     4561 tctaaatttt gttgcggtga ggcaaaatac tcaggtttta atgatgggga tttgctataa
     4621 gctgtatcaa gtcctgcacg attttctgta gtggttatag gcattcttac aaaacctgta
     4681 ttgacataag ctgctatatc tagtgcatct tcatcgctta atataggatt atctgcactc
     4741 gcaccaaaag gcatggctga ttttaaaaat cttgctaaaa atggtatcat agccatgtgt
     4801 ccaccatcag gatagataag taaagatgga tataaatgtc cgctaccttg ttcgtaatta
     4861 tcatttttta ccccaagtcc tctttcgcca tgacaagcaa cgcaattttc ttcaaagagc
     4921 tttttcccac gcacagggtc agctgggcga tttggaaaat tcatcttagc aaaaaaatct
     4981 ccttcaagct ttacgccgtc tttaatacca taagcttctt ttagccattt aaaataagct
     5041 aaaattgctt tcatttcttt agaatcatta ggaaatctat gagagtcagt tccgcccatt
     5101 ccgcgaattc tatcttcaac agagatgatt ttcatcgttt ctatatcaag ttttggataa
     5161 ttgtttagga catttaaaaa tggaataaca tatttttttg tccctggtaa accattgccg
     5221 tcattgtcca tgtgacagga aatacagttt acttcgttgc ttgtcttttt tagcttgcta
     5281 tagggtccta gagtactttc tgtcttgctt aaaagctcta tgccataacg gattaaatcc
     5341 ccttgcttac cttttggaac atcattgatg cttaaatttt tatttggcca ttcttgcaca
     5401 ggtcttttgg aaagttcctt aaaatactct actccttcct tgtcgcttaa ttcttctcct
     5461 actttgtaat cactcacgct tttagcacta agactcaaac taagacataa accaagcaat
     5521 aaaatgtgtt ttttcatgat tttcctcctt tttatttgca gttcaaattg attttagtgt
     5581 attttttctt aaatattaag cataataaga ataatttaaa taaaattaaa ttttagagtg
     5641 tta
//
LOCUS       DARBAC010000098         5582 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.098, whole genome shotgun sequence.
ACCESSION   DARBAC010000098 DARBAC010000000
VERSION     DARBAC010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.098"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            21..1220
                     /locus_tag="SB799_001440"
     CDS             21..1220
                     /locus_tag="SB799_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868668.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHIQLLSNLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKLLVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSITKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGIVLAGLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSFKKI"
     gene            1276..1596
                     /gene="ciaC"
                     /locus_tag="SB799_001441"
     CDS             1276..1596
                     /gene="ciaC"
                     /locus_tag="SB799_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HEG0868669.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     EEKTSSSKFTNEDIDLSAAREDFRSYAWQKMREDQYKKNEETLLNKLFATIDAGNATN
                     NTKA"
     gene            1776..2798
                     /locus_tag="SB799_001442"
     CDS             1776..2798
                     /locus_tag="SB799_001442"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEG0868670.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKGKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            2795..3697
                     /locus_tag="SB799_001443"
     CDS             2795..3697
                     /locus_tag="SB799_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEG0868671.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIISEVKVVLEKNVEFDFLTLTANGEPSLYPHLNELILSLRSIAKDKKL
                     LILSNGTAVLDEDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKA"
     gene            complement(3694..4890)
                     /locus_tag="SB799_001444"
     CDS             complement(3694..4890)
                     /locus_tag="SB799_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868672.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVAEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFYMQNDFLNFQKKIDVDSVLDLLKEKFETTGQNLTKTS
                     HEKDRYLHLLEENLYQLGNISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHHKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKILNENVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNVCINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKVGDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(4892..>5582)
                     /locus_tag="SB799_001445"
     CDS             complement(4892..>5582)
                     /locus_tag="SB799_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HEG0868673.1"
                     /translation="NHDFTIQKELKSYFELENLPNDIEIFDNSHLQGMANVGAMVTYS
                     ANSWDKSKYRKFHLKHKNDYDQMREVLMRRALDFDKIPPPDLWLIDGGKALLDLAKEI
                     IVSSGANVDILAISKEKIDAKAHRAKGGTRDKIHSLKGEFSLSINDKKLQFLQKLRDE
                     AHRFAISFHQNTKKKQDLNSSKLVNLGLSSGVIQKLLAYYGNFESIYKADFKDLAMLV
                     GKKVAQKIKEN"
BASE COUNT         1986 a          857 c          817 g         1922 t
ORIGIN      
        1 ttttttataa ggaacttaaa atgcaaaatt acaaaaaagc tctttttgca ctagctctta
       61 gtgctttttg tatgggcgta accgaatttg ttatggcagg agttttggtt gatgttgaag
      121 cgtattttag cgtagatgca aaaaccgcgg gctatcttac aaccttatat gccataggtg
      181 ttgttatagg cgctcctctt attactatac ctttaagtcg ttttcataga cacatacaac
      241 ttttaagtaa tcttggaatt tttgctctag caaatttcat tatctttttt agccaaaatt
      301 tctatcttac agcatttgcg cgttttatag caggaacaca acatggggta ttttttgtca
      361 ttgctacctt agctgtaagt gctataaccc cagatgataa aaaatcaagc gctctagcta
      421 taatggtcac aggacttact gtagccttag ttactggagt accgcttgga actttcatag
      481 gacattattt tggctttaaa tttatctttt tacttatttt tatcattaca agcttagcat
      541 tttttggagt atggcatatg atgcccaaaa atttacatcc tagcccaaca agtcttaaaa
      601 atttaatccc tgctttttcg catcaaaatt tgttaaaaac ttatactata accatttgta
      661 gttgtggggc tcaatttgtt ctttatactt atttgcaaaa attacttgta gaaataagcg
      721 gttttaaagt ccaagataca gcttatatct tgctcttata tggaatttgt gcaatttgtg
      781 ggaatttatg gggcggaaaa atagtagata aaaaaggtgc tattttttct ttgcgtctta
      841 ttttaagcat acaagttcta gtatttttaa gcgtatttct caccatgcac tctaaaattt
      901 taatcatttt tagcgtagct ttgataggat tttttgcctt ttcaaccata cctgcgctaa
      961 aaatgcttag cattactaaa gctaaacgcc acacttataa agtcatagac agcacagtaa
     1021 gtgtgaatga agcagctttt aatgtaggca tagctttagc aagtttttta ggtgggattg
     1081 ttttagcagg attgggtata gaatttaatg ctttattttc ggcacttttt gtaagccctg
     1141 ctttgatttt tgccttactt tttgccaaag ataaattaaa ttataaaaaa tttcaaagaa
     1201 aaagttttaa aaagatataa attggaatag aaattgcttg tttatttaat gtaaagttaa
     1261 ataaaggagg agaaaatggt agtagataat actcaaaaaa catcaaatgc tatctttagt
     1321 accacaacaa aggttaaaga gaaaaatact tcagcagatg aatttcaagc cacattaaat
     1381 gaagtaaaaa acaaagaaga aaaggaagaa gaaaaaacaa gctcaagcaa atttactaac
     1441 gaagatattg atcttagtgc tgctagagaa gattttagat cttatgcttg gcaaaaaatg
     1501 agagaagatc aatacaaaaa aaatgaggag actttgctaa ataagctttt tgctacaatt
     1561 gacgcaggaa atgccacaaa caatacaaag gcttaatata caaatcaaaa ctcaaactac
     1621 acaaacgaga attccaataa ttctcgtaaa atttctcata actctggata aaatgaaaaa
     1681 atttattatt tcctccatat gaagaaaata tagaaaaatt gaccaattta atttatcaaa
     1741 ttctgttata attttgctaa aaacaaagga aaataatgat ttttattgat gcttgcttta
     1801 aaaaacctac accttacacc cctatttgga tgatgcgtca agcaggaaga tatttgccag
     1861 aatatatgga agtaagaaaa caagcgggtg attttctctc tttatgcaaa gactataaaa
     1921 aagcttctga agtttcttta cagcctattg atattttaga tgtagatgca gcaatcattt
     1981 tttcagatat cttagttgtt cctcttgaaa tgggtatgaa tttacgtttt gaaaaaggag
     2041 aagggcctgt ttttgataat cctatttcaa ccctagaaga cttagaaaaa cttgacgatc
     2101 aaaatgcaca taaaaaatta aattatgtct atgatgcctt aaagcttact agagaaaaat
     2161 tatctcaaaa caaggcttta ataggatttt gcggaagccc ttggactata gctacctata
     2221 tgatagaagg aagtggaagt aaaaattatg caaagtgtaa aaaaatgctt tatcaaaacc
     2281 cagaactttt acataaaatt ctaaacaaac taactcaagt tttaaaactt tatttagaag
     2341 agcaaattaa agcaggtgct aatgctatac aaatttttga tagctgggca agtgctttag
     2401 aatacgataa gttttttgaa ttctctttta attatatgct tgaaatttca aattttatta
     2461 aaggcaaata cccaaatata cctgtaattt tattccctaa aggcattagc ggttatttgg
     2521 atagaatcga tggtaatttt gatgtttttg gggttgattg gagcactccg cttgatttag
     2581 cacgtgataa actatcacac aaatacactc ttcaaggcaa catggagcct tgtagacttt
     2641 atgataaaaa tgccatcaaa gaaggagtgg aaaaaatact aaaaaccatg caaaataaag
     2701 ctcatatttt caacttagga catgggatct tgcctgatat tcctgttgaa aatgcaaaat
     2761 attttatcaa gcttgtacaa gaaagttcag ctaaatgaaa atactctttg gtcctgttag
     2821 ctcaaggcgt tttggaagat ctttgggtat agatttaagc cctagcaaaa aacaatgcaa
     2881 ttttgattgt gtttattgtg agcttgatcc aaaaaaagcc caagaaaaac aggatgaaat
     2941 tatcagcata gataaaatta tctccgaagt taaagttgtg cttgaaaaaa atgttgaatt
     3001 tgattttctt acccttactg ctaacggaga gcctagtctt tatcctcatt taaatgagct
     3061 tattttatct ttacgcagca ttgctaaaga taaaaaattg cttattttaa gcaatggcac
     3121 agctgtatta gacgaagaca aatttaatgc tttgctaaaa ctagatgtgg tcaaatttag
     3181 cctagatagt gcagttgcta aaacttttta tcgtattgat agagctttaa aaaacataga
     3241 tttagaaaaa atgatagaaa aaatggcaga ttttagagct agatttaacg gagatttgat
     3301 tatggaaatt ctagttgtta aagatcttaa tgacaacgaa gaagaatttg aagcacttaa
     3361 tcaagcttta aaaaaaatca tgcctttaag ggttgatcta agcaccatag atagacctcc
     3421 tgcttatgcc gttaaaaaag taagcgaaga aaaactttta gaactttcta aacttataga
     3481 ttctactcct gtactcttag ccaaaagaca ttatgaaggt gaaaaactaa gcttcaatga
     3541 agaagaatta ttaaaaatgc ttcatttgcg ctcacaaagc gaaatagaca ttgaagtgaa
     3601 atttgatgaa caatccaaaa ctctcttaaa tcaacttatc aaagaaaaaa aggtaaaaat
     3661 tctcgattta gctggagtta aattttataa agcttaggcc tttggtaaat actttctaag
     3721 taaagttata agatcatttc tacttacatc acttaaaact tcgctcacac aatcaaaatc
     3781 cccaactttt tcctttgaaa aaaagatgat atggctttgt ggatgctgtt ttttataagc
     3841 acttaacaaa tttctcattt gctcaagatc aaatttaatt aattcataat caagcaaaat
     3901 caaacgataa gtctccttgc ttaattcttg ttttaattga ctaaaagaat ttatacatac
     3961 atttttatcg cattgttttt ctattatatt aaaaaataag gttgcatcaa aatcattttg
     4021 tttaaaaagc aatacattat tttgataagg ggttttaaat tttaaagtgc aaaccttatc
     4081 aagcttgttt tgcaaaatat tttcaagatc ttttttttca aaaggtaaag ttaaaaaata
     4141 ctcataatgt gtatttttat ggcgacccat cactataaaa tcatagtttt tctttacatt
     4201 ttcatttaaa attttatcct tgataaaaat caaatgaaag tcattaacat caaaacttaa
     4261 atttttaaaa caagtgcttt ctatgccaaa atacgaaagt aaatttgcaa gtaaaaaatt
     4321 ctcaagctca tcattattaa ctatagccac acttgcttca aattgcaaaa cctttccatg
     4381 agatgtccct ataatgcttt tatgatgctc taaagcctca tttaattcta atctaatttg
     4441 atctttttga gaatttaagg catttaaaat caaagaatta atttctttat tatacccttc
     4501 atttaagcaa cgcattgcat tggatatatt tccaagctga tataaatttt cctccaataa
     4561 atgcaaatat ctatcttttt catgggatgt tttagttaaa ttttgacccg tagtttcaaa
     4621 tttttccttt aacaaatcaa gcacgctatc aacatcaatc tttttttgaa aatttaaaaa
     4681 atcattttgc atgtaaaaaa ttttttgata tattttgttt atatttctat tttgtctaaa
     4741 agcaaaaata aaaagtgtta aagataaaac aaaaatgcta gaaaacatac ctattttcag
     4801 ttgttcagca acactatcaa gctttgagat atcaatactt aaatacgcta aaattagatt
     4861 aaaaataaaa attatccctg ctaatatcaa atcaattttc ctttatcttt tgtgccactt
     4921 tcttgcctac aagcattgca agatctttaa aatcagcctt atatatagat tcaaaatttc
     4981 cataatacgc taaaagtttt tgtataaccc ctgaactaag tcctaaattt acaagcttag
     5041 aactattcaa gtcctgtttt ttcttagtat tttgatgaaa gctgatagca aaacgatgcg
     5101 cttcatctct taatttctgt aagaattgta gttttttatc gttaatactt aggctaaatt
     5161 ctccttttaa ggaatgaatt ttatctctag tacctccttt agccctatgt gcttttgcat
     5221 cgattttttc ttttgaaata gctaaaatat cgacatttgc cccactactt acaatgattt
     5281 ctttagccaa atcaagcaaa gccttgcctc catctataag ccataaatca ggagggggta
     5341 ttttatcaaa gtccaaagcc ctacgcatta aaacttcacg catttgatca taatcatttt
     5401 tatgttttaa atgaaatttg cgatattttg acttatccca agaatttgca ctataagtta
     5461 ccatagctcc aacatttgcc atgccttgca aatgagaatt atcaaaaatt tctatatcat
     5521 ttggtaaatt ttcaagctca aaataagact ttaattcttt ttgtatagta aaatcatgat
     5581 tt
//
LOCUS       DARBAC010000099         5408 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.099, whole genome shotgun sequence.
ACCESSION   DARBAC010000099 DARBAC010000000
VERSION     DARBAC010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5408
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.099"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            18..1004
                     /locus_tag="SB799_001446"
     CDS             18..1004
                     /locus_tag="SB799_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEG0868674.1"
                     /translation="MNKFSIVLTLLLCGSCALALDPNLEKTKSATGIDLPTAKWNLPK
                     ALNEDGTIDETKMPKNSEYSKMVILGNKILNETSKYVGPQAKDPKKRFAGNNLSCSSC
                     HANGGSVQNQSGFVGIWARFPQYNARGDKVITLADRINGCFERSMNGKRMPSDTPEMK
                     AMLTYMQWLSQGVPVGAKIEGQGLKKIDFISRAADPKKGKAIYMDKCAVCHQENGLGL
                     KNEDSAGAYYLYPPLWGDDSYNTGAGMYRLIKAASYIKENMPQGAPDLSLEDAYDVAA
                     YMNSQARPIKANRDKDFPDRKVKPLDMDVGPYDDSFSTTQHRYGPYTNMIKK"
     gene            complement(1038..1679)
                     /locus_tag="SB799_001447"
     CDS             complement(1038..1679)
                     /locus_tag="SB799_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEG0868675.1"
                     /translation="MRKFFCKFVLTLVFCSSFALANNSFITLNPSLPNSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFAFAQYKDEQNG
                     KDASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
     gene            complement(1765..3627)
                     /locus_tag="SB799_001448"
     CDS             complement(1765..3627)
                     /locus_tag="SB799_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004315485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HEG0868676.1"
                     /translation="MRLSKTLCMALLAGSTLLAPNVLMAMGGPSGAKIDWQIQGQIGA
                     IKMNPYGLSPLTAIIMDNGYVLSDIKVTIVPKPNGQTISYNVNSKMAKTYGGIPIFGL
                     YPSYLNTVKVSYTKTANGKSQKVIDEIYKITTPGVSIEPSGSTDQRGTPFENVKVLKM
                     DPKFSDRLYLVNNAPGKQSGKGSQSVWNNPVGGAMEWDENSNVFIIDTKGEIRWYFDN
                     DKLMNWDNIYNRGIMMGFHQNKDGALTWGFGQRYVKYDILGREIFNRKLPAAYIDFSH
                     AMDNMQNGHYLLRVASANTLRPDGKHVRTVRDTIVEVDENGNVVDDWRLYEILDPYRS
                     TIIKALDQGAVCLNIDASKAGKTLSDEELAKMDESDKFGDIAGTGIGRNWAHVNSVDY
                     DPSDDSIIISSRHQSAVVKIGRDKKIKWILGAHKGWNKEFQKYLLQPVDKNGKKIVCD
                     DDYSKCPGYENDNGGFDFTWTQHTGWRIDSKSNKRYIYISVFDNGDARGAEQPAFASQ
                     KYSRAVIYKIDQQNKTVEQIWEYGKNRGNEWFSPVTSLTQYEPDKDSIMVYSATAGMA
                     FDLSKGVSLGEPKPEIDEFNWGAKEPSVQIQFSGSGTGYQAMPFSVDQAFNLKK"
     gene            complement(3727..4524)
                     /gene="dsbI"
                     /locus_tag="SB799_001449"
     CDS             complement(3727..4524)
                     /gene="dsbI"
                     /locus_tag="SB799_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HEG0868677.1"
                     /translation="MSCIKMKDNCRKFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMEPCEQCVYIRFDMLVMAIGGMIALINPTNNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLHEWAPSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFIVLFAMFIA
                     YVLDKNKLNAKIFALVIVILVLVLKFIGEPKNPNQNIASLNHLNQVV"
     gene            complement(4521..5183)
                     /locus_tag="SB799_001450"
     CDS             complement(4521..5183)
                     /locus_tag="SB799_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEG0868678.1"
                     /translation="MKFPVKLARSIVVCAFLAGISASALSEGKEYIILKNPIANADNS
                     LIEIFSYRCTHCYDHHKFNTMGKVKEKLPNLTYKFYPVSSMGDYGRQANEIFAFAAFK
                     DGVNKIDPTDKNSLTHKVAKAYFNAYFKKKQRWENGKNPEAFYSVGLKAMNVSKADLE
                     NFLKTPEAAELLKSYEIANPISQNYGTPAFVVNGKYQIIPSAINSPEALIEITKELSK
                     QK"
BASE COUNT         1870 a          927 c          773 g         1838 t
ORIGIN      
        1 aataaggagg aaaattgatg aataaatttt ctatagtttt aactttgttg ttatgtggaa
       61 gttgtgcttt agccttagat ccaaatttgg aaaaaaccaa gagtgcaaca ggtattgacc
      121 tgcctactgc taaatggaat ttgcctaagg ctttaaatga agatggcact atagatgaaa
      181 ctaaaatgcc aaaaaattca gaatatagca aaatggttat tttaggaaat aaaattctta
      241 atgaaacaag caaatatgtg ggtccacagg ccaaagatcc taaaaaaaga tttgcgggaa
      301 ataatctttc ttgttcaagc tgtcatgcta atggtggaag tgtgcaaaat caatcgggtt
      361 ttgtaggaat ttgggcaaga tttccacaat ataatgccag aggagataaa gtaattacct
      421 tagcagatag gatcaatggc tgttttgaac gctctatgaa tggcaaaaga atgcctagcg
      481 atacacctga aatgaaagcc atgctaactt atatgcaatg gttatctcaa ggagttccag
      541 taggagctaa gatagaaggg cagggactta agaagataga ttttatctca agagcagctg
      601 atcctaaaaa aggtaaggca atttatatgg ataaatgtgc cgtttgtcat caagaaaatg
      661 gcttagggct taaaaatgag gatagcgcag gggcgtatta tctttatcca ccactttggg
      721 gtgatgatag ttataataca ggagctggaa tgtatcgtct tatcaaagct gcttcttata
      781 ttaaagaaaa tatgcctcaa ggtgcgcctg acttaagtct tgaagatgct tatgatgtag
      841 cagcttacat gaattcacaa gctcgcccta ttaaagcaaa tagagataaa gactttccag
      901 atagaaaggt taagccttta gatatggatg taggacctta tgatgatagc ttttctacaa
      961 cccaacatcg ctatggacct tatacaaata tgatcaaaaa ataattttaa ggcaattttt
     1021 attgccttaa aaatttatta tttcatattg cttaattttt taactagatc ttctaaatct
     1081 tgcattgaat tgattgcgct tgggttaatt tgatattttc cattaacaac aaaagcaggg
     1141 gtgccatagg ttttagctat atcattagct ctttgaaact cgcttaaaat ttctttagct
     1201 tttggggtat ttaaaaaatt taatacttca tttttattta cattcatagc ctttaagcct
     1261 atgtcgtaaa attcatctaa atttgaaaaa tttctttgct tgtttaaaaa ataagaaaca
     1321 aaataaacat cagcaagttt atgagataaa ctatcagaat aactcgcatc tttaccattt
     1381 tgctcatctt tgtattgagc aaaggcaaaa agctcattca tttctttgga aaattcccca
     1441 ttcattaaac ttacaggata gagtttaaaa tgtaaatttg gaaaagcttc tcttagtttt
     1501 tcaagagttc caaatttatg atgattataa caatgtatac atttataaga aaatgcttct
     1561 attacactat tttcagagtt gggtaaactt ggattaaggg taataaaact attatttgct
     1621 aatgcaaaac ttgaacaaaa tacaagcgtt aaaacaaatt tgcaaaaaaa tttacgcata
     1681 ttatatcctt ggttaaataa aattttcaaa gataatttta tttaaaaaaa ataaataagc
     1741 ccaaatttat ttttgggctt attgttattt tttaagattg aatgcttgat caacactaaa
     1801 aggcattgct tggtaacccg tgcctgaacc gctaaattga atttgaaccg aaggttcctt
     1861 agcgccccag ttaaattcat caatttcagg ttttggttcc ccaagactta cacctttgct
     1921 aagatcaaaa gccattccag ctgttgcgct ataaaccata atagaatctt tatctggttc
     1981 atattgagtt agagaagtta caggagaaaa ccattcattt ccacgatttt taccatattc
     2041 ccaaatttgt tccacagttt tattttgctg atcgatttta taaattacag cacgagaata
     2101 tttttgactt gcaaatgcag gttgttcagc tcctcttgca tcaccattat caaaaacact
     2161 tatataaata taacgcttgt ttgatttact atcaattctc cagcctgtat gttgcgtcca
     2221 agtgaaatca aatccaccat tgtcattttc ataacctggg catttgctat aatcatcatc
     2281 acaaacaatt tttttgccat ttttatctac aggttgcaat aaatattttt gaaattcttt
     2341 attccaccct ttatgtgctc ctaaaatcca ttttattttt ttatcacgac caattttaac
     2401 aacagcactt tgatggcgac tagaaataat aatactgtca tcacttggat cataatcaac
     2461 gctatttaca tgagcccaat tcctacctat acctgtacct gctatatctc caaatttgtc
     2521 gctttcatcc attttggcaa gctcttcatc gcttaaagtt ttacccgctt tgcttgcatc
     2581 tatatttaaa cacactgcac cttgatctaa agctttgata atggtacttc tataaggatc
     2641 taaaatctca tacaatctcc aatcatcaac aacattacca ttctcatcta cttctacaat
     2701 agtatcacgc actgtgcgta catgcttacc atctggacgc aaagtatttg ctgaagctac
     2761 tcttaataaa taatgcccat tttgcatatt gtccatagca tgagaaaaat ctatataggc
     2821 agcaggtaat ttgcgattga aaatttctct tcctaagata tcatatttta catatctttg
     2881 accaaatccc caagttaaag ctccatcttt gttttgatga aagcccatca taattccacg
     2941 attgtaaata ttatcccagt tcattagttt atcgttatca aaataccatc tgatttcacc
     3001 cttagtatct atgataaaga catttgaatt ttcatcccat tccatagcac cacctacagg
     3061 attattccat acagattgtg agcctttgcc agattgtttt ccaggagcat tatttactaa
     3121 atatagccta tctgaaaatt ttggatccat ttttaatact ttcacatttt caaaaggagt
     3181 tcctctttga tcagtacttc cacttggttc tatgctaacc cctggagttg taattttata
     3241 aatctcatca atgacttttt gacttttacc atttgcagtt ttagtataac ttacctttac
     3301 cgtatttaaa taagaaggat aaagtccaaa aataggaatt ccaccgtaag tcttagccat
     3361 tttagaattc acattataag aaatagtttg accatttggt ttaggaacaa tggttacttt
     3421 tatatcgctt aagacataac cattgtccat aataatagcg gtcaaaggag acaatccata
     3481 aggattcatt ttaatcgcgc ctatttgtcc ttgaatttgc caatctattt tcgctccact
     3541 aggaccaccc atggccatta aaacattagg tgcaagtagg gtagaacccg ccaaaagtgc
     3601 catgcaaaga gttttgctaa gtctcatgat caatccttta aaattattta agccatccta
     3661 aaatagctta ataaaatttt aataatacgc agcaaaaata atttgttgcg tattttaaga
     3721 gtatctttaa acgacttgat ttaaatgatt taaactagct atattttgat ttggattttt
     3781 tggttcgcct ataaatttaa gcactaaaac caaaataaca atcaccaatg caaaaatttt
     3841 agcattaagt ttatttttat ctaaaacata ggctataaac attgcaaaaa gcacaataaa
     3901 acaacataaa aatgctataa gacagcaaat tgccatattc ataaacttta aactaggaat
     3961 caaataccaa ccattgctat aaagcccatt ttcaaaatca ggtggagttc ctataaaaaa
     4021 tttttgaaaa gcattaagat gattataagc attttctgga actacagggg tatccatccc
     4081 acattctcct gttggcaaaa accaactagg agcccactca tgcaaaggta aattaaatgg
     4141 ataaatagga atttcacgac atccatctac acctgcaaaa ggattttcag aatgaaccac
     4201 ttcatgaata tgatttaaag ttagacaatg ctccaagcca agccaaattc cataaaaagc
     4261 taagctataa gaaaaaattt ttataatatt atttgtaggg ttgattaatg caatcatacc
     4321 gcctatagcc ataacaagca tatcaaatct tatatacaca cattgttcac aaggttccat
     4381 aaaaagatat tcttgaaata aaaaatgtgc tatacaagta agtcctatag taactataat
     4441 caaaattaac caaggtttgc gcgtatcttg ccatttagaa agtgaaaatt ttctgcaatt
     4501 atctttcatt tttatacaac tcatttttgt ttgctaagtt ctttagtaat ttcaatcaaa
     4561 gcctctggag agttgattgc acttggaatg atttgatatt ttccattaac aacaaaagca
     4621 ggggtgccat aattttgcga aataggattg gcaatttcat aactttttaa aagctctgca
     4681 gcctctggag tttttaagaa attttccaaa tcagccttac tcacattcat tgcttttaaa
     4741 ccgacactat aaaaagcttc aggattttta ccattttccc atctttgttt tttcttaaaa
     4801 tatgcattaa aataagcttt agcaacttta tgagttaagc tatttttatc cgtaggatca
     4861 attttattta caccatcctt aaatgccgca aaagcaaaaa tttcattagc ttgccttcca
     4921 taatctccca tagaacttac aggataaaat ttgtaagtta aattaggtaa tttttcttta
     4981 actttaccca tggtattaaa tttgtgatga tcataacaat gagtacagcg ataagaaaaa
     5041 atttcaatca atgaattatc agcgttagca ataggatttt taagaattat atattcttta
     5101 ccttcactta atgcactagc acttatacct gctaaaaaag cacatacaac aatagatctt
     5161 gctaatttta ctggaaattt cattaccttc tccttgaaat ttggttttga taaaactttt
     5221 tattaagttt ttatgtaata accattataa aactattaaa ataaaaatat tcttaaaaat
     5281 tttataacta agaatattta ctttaactaa aaatcaagaa taggggatta aaaaatttaa
     5341 tgcacaagtt atcattttta tgtatatttt gataataata taaaataatt taatttttaa
     5401 atattctt
//
LOCUS       DARBAC010000100         5348 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.100, whole genome shotgun sequence.
ACCESSION   DARBAC010000100 DARBAC010000000
VERSION     DARBAC010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.100"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..399
                     /locus_tag="SB799_001451"
     CDS             <1..399
                     /locus_tag="SB799_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEG0868679.1"
                     /translation="LDEIQAAFLDIKLKYLDEDNNKRKNIANFYLQNIKNENIILPSN
                     KFDHVWHLFIVKTKLRDELQHYLNNHDIQTIIHYPIPPHKQKCYKDLNHLQLPVTENI
                     HQEVLSLPISPTMKENDFKKVADILNKWKV"
     gene            complement(431..1684)
                     /locus_tag="SB799_001452"
     CDS             complement(431..1684)
                     /locus_tag="SB799_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HEG0868680.1"
                     /translation="MKKSKSIQIIKQQGIAEFIKYKKNKIYTKYEKKFNINIFTPYLL
                     KFCKPLKDDYKFILFSYGVSGHWAFKSFLKYCELDDFVLYQNNYSYYKEYKNFNKKNY
                     YVEIAWYQSMQPKYKHISKILNKNKPVVILTRDPISRLKTMVNHGSYKIEELGKNELK
                     NFYINEDIFENLDRIRYTDKNGHNANLKKPDLSSIYFIVNEELSFSYFSNINLIKNKN
                     ILYVDTKSISKDNAFATIKTLAKELNFKEPNDNDEYKFTQKFWNELYYLLPYRLIVNN
                     DILIIVSDENKVFLDNDKHYNEIKDDLIDIKKELVNTKSKLFDKISINIENKNWIIIK
                     DDKALINDLREYFEKFMIILEKKANERLENMVKEEDVLNYLREHQDLGKKIKNILDYE
                     LQHIKEHRPDIINSWEYYKKFLEIF"
     gene            complement(1681..2703)
                     /locus_tag="SB799_001453"
     CDS             complement(1681..2703)
                     /locus_tag="SB799_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002891861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868681.1"
                     /translation="MIYYPYYLKKYLAKIACLFIPNKNIRAIIREKLLNQFMQIKLDN
                     LNSYIPKDIVDNIEKYDNEHFYKINHIIKSKHKGFFDFDEKSKNPTSPLNPWAYIRVK
                     NEALTLKASLKSILPAIQRGIIGYNDCNDGSEEIILEFCKQYPSFIPVKYPYEVQIEN
                     PQSEENKLYSYYNYVASFIPQGEWLIKIDVDHIYDAKRLYKSFYIPKKDYDILCYSRI
                     DFYYKDDDRAEVFIVKYKSINNILNNKSNDQWLIKNNHLKWAESMHEDRYCIEYLDIK
                     KLKIYQTEFLNYHFPYFKRSLDKNKIELIPIDDFSIKEYKDIISPDMVTKEKLLYLKK
                     YIKENQ"
     gene            2774..3547
                     /locus_tag="SB799_001454"
     CDS             2774..3547
                     /locus_tag="SB799_001454"
                     /inference="COORDINATES: protein motif:HMM:NF013882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEG0868682.1"
                     /translation="MKFFIINLKIAKDRKEYMQNLCLKHNLDYEIIQAVDGKELDSDF
                     VKNISDFSLSEKYLGRTLSLGEIGCALSHKKCFERMFELNLNECLILEDDAYFDEKLN
                     YILSLKDKFPKDLELFLLGHYRQVYLDDGFRIESPFSLRYDYKIDDFYHAKRLVGGGN
                     GTHGYYINKNGALKMYKYLEKIIFPYDHCTSNDNIINVYALYPVVITTDEIFGAQTYV
                     QDDNKRRYRKRSKISKYIKKIKNKIIFFIPSLKKLRKYE"
     gene            3540..4496
                     /locus_tag="SB799_001455"
     CDS             3540..4496
                     /locus_tag="SB799_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002869613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide synthesis protein"
                     /protein_id="HEG0868683.1"
                     /translation="MNNFVLYSLYFIYSAFFLNKHRRIIKGKILHQKEHENIANYLEN
                     AYIKKYFENKLDDIQIKKTRNINGKKIIWQFWYQGIDNAPCIIKKCFKSVQKYKGNYE
                     VVLLDKDNIKDYLIFPDFIYQKIDDKKFGEKTITIFSDLLRVSLLNNYGGIWLDAGMF
                     LSGEIQKEILDQDFFIFHRSTKKPQDYKNWINFNYNFFSWDEKFKVNIVNGFILSNKN
                     NEIMKIMQDILINYWKYENKLVYYFMFQILFDALKKKYLNLNLYITNDTDIHLLQYHA
                     KDKYSDKLWNDIKNKTSIHSLKIFKKIRKHSMIDKILFKDTI"
     gene            4493..>5348
                     /gene="yibB"
                     /locus_tag="SB799_001456"
     CDS             4493..>5348
                     /gene="yibB"
                     /locus_tag="SB799_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YibB"
                     /protein_id="HEG0868684.1"
                     /translation="MIDNEITIVTAFYDIGRKDIKNFERDNDKYLSYFEFLAGIKNKM
                     IIYTQENIKEKILDTRKKHNLEDKTIIITKELQEFDEQGYKKIIDTFRNYDQSINRKN
                     PNNIECISPMYCYLMYLKPFFVCDAIQRGLTDENIMWLDFGFNHGGNFFVDKDQFNFY
                     LQKQNSIDENKINLFSIKNDDKQTLANIYFSMETFLMGGIIFAKSKNWLLFKHHMQKC
                     IKYFTSFGIIDDDQIMLLWCARNYRKNYNIIKVYFWFDSLYHFIPQNIAKKLKINTNQ
                     IKHYKIIKE"
BASE COUNT         2067 a          584 c          602 g         2095 t
ORIGIN      
        1 ttagatgaga tacaagctgc ttttttggat ataaaattaa aatatttaga tgaagacaat
       61 aataaaagaa aaaatatagc aaatttttat ctacaaaata taaaaaatga aaatattata
      121 ttacctagta ataaatttga tcatgtttgg catctattta tagtcaaaac aaagcttaga
      181 gatgaattac aacactatct aaataatcat gatattcaaa ctattataca ctatcctatc
      241 cctcctcata agcaaaaatg ctataaagat ttaaatcatt tacaactacc cgtaacagaa
      301 aacatccatc aagaagtttt gtcattacct atatcgccaa caatgaaaga aaatgatttt
      361 aaaaaagtgg ctgatatatt aaacaaatgg aaagtctgat agatcgctct ccattttatt
      421 cgcttattct ttaaaaaatt tcaagaaatt ttttatagta ttcccaacta ttaataatat
      481 ctggtctatg ctcttttata tgttgtaatt cataatccaa aatattttta attttttttc
      541 ctaaatcttg atgctccctt aaataattta aaacatcttc ttcttttacc atattttcaa
      601 gtctttcatt cgcttttttc tctaaaataa tcataaattt ttcaaaatat tctctaagat
      661 cattgattaa agctttatca tctttaataa tgatccaatt tttattttct atattaattg
      721 aaattttatc aaataacttg ctttttgtat ttacaagttc tttttttata tcaattaaat
      781 catcttttat ctcattataa tgcttatcat tgtctaaaaa tactttattt tcatcagata
      841 ctattatcaa aatatcatta ttgacaataa gtctataagg tagtaaataa tacaattcgt
      901 tccaaaattt ctgcgtaaat ttatattcat cattatcatt tggttcttta aaattaagct
      961 ctttagcaag agtttttata gtggcaaatg cattatcttt tgaaattgat ttcgtgtcta
     1021 catataatat atttttgttt ttaatcaaat ttatatttga aaaatagcta aaacttagct
     1081 cttcgtttac gataaaatag atagatgata aatcaggttt tttaagatta gcattatgtc
     1141 catttttatc tgtatatctt attctatcta aattttcaaa tatatcttca tttatataaa
     1201 aattttttaa ttcattttta ccaagttctt caatcttata agaaccatga ttaaccattg
     1261 tttttaatct agatatagga tctcttgtca aaattacaac aggcttattt ttatttaaaa
     1321 ttttacttat atgcttatat tttggctgca tactttgata ccaagctatt tctacataat
     1381 aatttttttt attaaaattc ttatattctt tataataact ataattattc tgatataaga
     1441 caaagtcatc taattcgcaa tattttaaaa aacttttaaa agcccaatgc ccacttacac
     1501 catagctaaa taatataaat ttataatcat cttttaaagg tttacaaaat tttaataaat
     1561 aaggagtaaa aatattgata ttaaattttt tctcatattt agtgtatatt ttattttttt
     1621 tatattttat aaattcagct attccttgct gtttgattat ttgtatggat ttcgattttt
     1681 tcattgattt tcctttatat atttttttaa atatagcaat ttttctttag ttaccatatc
     1741 aggtgatatt atatctttat attctttgat actaaaatca tctatgggaa ttaattctat
     1801 cttattttta tctaagcttc tcttaaaata tggaaaatga tagtttaaaa attctgtttg
     1861 ataaattttt aactttttta tatccaaata ctctatacaa tacctatctt catgcatact
     1921 ttctgcccat ttaagatgat tattttttat caaccattga tcattactct tgttattcaa
     1981 gatattattg atactcttat actttactat aaatacctca gctctatcat catctttata
     2041 ataaaaatct attcgagaat aacaaagtat atcatagtct tttttaggta tataaaaact
     2101 tttgtaaagt cttttagcat cataaatatg atcaacatct atttttataa gccattctcc
     2161 ttgtggaata aagcttgcaa cataattata ataactataa agtttatttt cttcactttg
     2221 cggattttca atttgtactt cataagggta ttttactggt ataaaagaag gatactgttt
     2281 gcaaaattct aagattatct cttcgcttcc atcattgcaa tcattatatc ctataatccc
     2341 tctttgtata gccggaagta tactttttaa cgaagctttc aaagttaatg cttcattttt
     2401 tactcttata taagcccatg gatttaaagg tgatgttgga tttttagatt tttcgtcaaa
     2461 atcaaaaaat cctttgtgtt tagattttat aatgtgattt attttataaa aatgttcatt
     2521 atcatatttt tctatattat ctactatatc ttttggaata tacgaattta aattatcaag
     2581 ttttatttgc ataaattgat tgagtaattt ttctctaatt attgccctta tatttttatt
     2641 tggtataaac aagcatgcaa tcttcgctaa atattttttt aaataatacg gataatatat
     2701 cattgtcata acctttttta tttatattat agtataattt tatcttataa attattatga
     2761 taggttttta tttatgaaat tttttataat caatttaaaa atagccaaag atagaaaaga
     2821 atatatgcag aatttatgtt taaagcataa cttagattat gaaatcatac aagctgttga
     2881 tggaaaagag ttggatagtg attttgtaaa aaatattagt gatttttctt tatcggaaaa
     2941 atatttaggt agaactttaa gtcttggtga gatagggtgt gctttatccc ataaaaaatg
     3001 ttttgaaaga atgtttgagc taaatttaaa tgagtgtttg atattggaag atgatgctta
     3061 ttttgatgaa aaattaaatt atattttaag tttaaaagat aaatttccaa aagatttaga
     3121 attattctta cttggtcatt ataggcaagt ttatttagat gatggatttc gtatagaaag
     3181 cccattttct ttaagatatg attacaaaat agatgatttt tatcatgcaa aaagattggt
     3241 tggtggcggc aatggaaccc atggatatta tatcaataaa aatggtgcct taaaaatgta
     3301 taaatactta gaaaaaataa tatttccata tgatcattgt actagtaatg ataacataat
     3361 aaatgtatat gctttatatc ctgttgttat aactactgat gagatatttg gagcccaaac
     3421 ttatgtgcaa gatgataata aaagaagata tagaaaaaga agtaaaattt caaaatatat
     3481 aaaaaagata aaaaataaaa tcatattttt tatacctagt ttaaaaaaat tgagaaaata
     3541 tgaataattt tgtattatat agcttgtatt ttatttattc tgcatttttc ttaaataaac
     3601 atagaagaat tataaaaggt aagatcttac atcaaaaaga acatgagaat atagctaatt
     3661 atttggaaaa tgcttatata aaaaaatact ttgaaaataa attagatgac atacagataa
     3721 aaaaaacacg gaatataaat ggtaaaaaaa taatatggca attttggtat caaggtattg
     3781 ataatgcacc ttgcattata aaaaagtgtt ttaaatctgt tcaaaaatat aaaggtaatt
     3841 atgaagttgt tttacttgat aaagataata taaaagatta tttaatattt cctgatttta
     3901 tttatcaaaa aattgatgat aaaaaatttg gagaaaaaac gataactatt ttttctgatt
     3961 tattaagagt ttctttgctc aataattatg gtggaatttg gctagacgct ggtatgtttt
     4021 taagcggaga aattcaaaaa gaaattttag atcaagattt ttttattttt catagatcta
     4081 caaaaaaacc gcaagattac aaaaattgga taaattttaa ttataatttt ttttcttggg
     4141 atgagaaatt taaagttaat attgtaaatg gttttatatt atcaaataaa aataatgaga
     4201 ttatgaagat aatgcaagat atattgatta attattggaa atatgagaat aaattagtat
     4261 attattttat gtttcaaata ttgtttgacg ccttaaagaa aaagtattta aatttaaatt
     4321 tatacataac aaatgataca gatattcatc tcttgcaata tcatgcaaaa gataaatata
     4381 gtgataaatt atggaatgat ataaaaaata aaacaagcat acattcatta aaaattttta
     4441 aaaaaattag aaaacattcc atgatagata aaatattatt taaggataca atatgatcga
     4501 taatgaaatt acgatagtaa cagcttttta tgatataggt agaaaagata ttaaaaattt
     4561 tgaaagagat aatgataaat atttatctta ttttgaattt ttagcaggta tcaaaaataa
     4621 aatgattata tacacccaag aaaatataaa ggaaaaaatt ttagatacaa gaaaaaaaca
     4681 taatttagaa gacaaaacca taataataac caaagaatta caagaatttg atgagcaagg
     4741 ttataaaaaa ataatagata cttttagaaa ctatgatcaa agtataaata gaaaaaatcc
     4801 aaacaatata gaatgtattt ctcctatgta ttgctacctt atgtatttaa aacctttttt
     4861 tgtatgtgat gctatacaaa gaggtttgac tgatgagaat ataatgtggc ttgattttgg
     4921 ttttaatcat ggaggaaatt ttttcgtaga taaagatcaa tttaactttt atctacaaaa
     4981 acaaaatagt atagatgaaa ataaaattaa tctcttttca ataaaaaatg atgataaaca
     5041 aactttagca aacatttact tttccatgga aacattttta atgggtggta ttatattcgc
     5101 aaaatcaaaa aattggctct tatttaaaca tcatatgcaa aaatgtataa aatattttac
     5161 ctcatttgga ataattgatg acgatcaaat aatgctttta tggtgtgcta gaaattatcg
     5221 aaaaaattat aacattataa aagtttattt ttggtttgat tctttatatc attttatacc
     5281 acaaaatatt gcaaaaaaat taaaaataaa tacaaatcaa attaagcatt ataaaataat
     5341 caaagaaa
//
LOCUS       DARBAC010000101         5219 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.101, whole genome shotgun sequence.
ACCESSION   DARBAC010000101 DARBAC010000000
VERSION     DARBAC010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.101"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            57..551
                     /gene="cetC"
                     /locus_tag="SB799_001457"
     CDS             57..551
                     /gene="cetC"
                     /locus_tag="SB799_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HEG0868685.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEKKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
     gene            671..2050
                     /gene="cetA"
                     /locus_tag="SB799_001458"
     CDS             671..2050
                     /gene="cetA"
                     /locus_tag="SB799_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HEG0868686.1"
                     /translation="MVKNGLLLTIFLSIIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            2068..2565
                     /gene="cetB"
                     /locus_tag="SB799_001459"
     CDS             2068..2565
                     /gene="cetB"
                     /locus_tag="SB799_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HEG0868687.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDINNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRVEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAK"
     gene            2651..4510
                     /gene="mnmG"
                     /locus_tag="SB799_001460"
     CDS             2651..4510
                     /gene="mnmG"
                     /locus_tag="SB799_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEG0868688.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     ARNKLLKLPNLEISQEQASVLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSKNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQIQMLRSVKGFEDAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPMFETMDNYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            4511..>5219
                     /locus_tag="SB799_001461"
     CDS             4511..>5219
                     /locus_tag="SB799_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEG0868689.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     AYFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILHFSREKNQEKIYISTKKLM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVMVFVLYVRVLPKRLEF
                     KLVKKEQISSKLFFLCIV"
BASE COUNT         1838 a          626 c          918 g         1837 t
ORIGIN      
        1 attattggta ataattctat ttttgattta tttgttttat tgggatgttt taaattatga
       61 aagaaatagt tttgtctgaa aatgctttaa ttacttctaa aacagatctt aaggggaata
      121 tcatttatgc caataatgac tttttaaaat acgcaggtta taaagttgat gaacttttgt
      181 ataaatctca taatatagta agacatgaag atatgccacg cactgtattt aaatgtcttt
      241 gggattatat tcaaaaagga gatgaaattt ttgcatttgt gaaaaataaa gccaaagatg
      301 gtaattttta ctgggttttt gcaaatgtaa gtgcttcatt tgatactaat ggaaatatca
      361 tcaattatta ttctgttcgt cgtgcaccca atagaaaatc tctttctata attgaagaag
      421 tttataaaat tttacttgaa aaagagaaaa aatcaggtat taatgctgga gtttcagctt
      481 taatggatat tgtaagttct tataaaatga cttataatga acttattttt aacttacaag
      541 aaaataatta aataagatat atttaatctt ttttattgta taattttcac ctagaagtta
      601 aagtaatata ttgttaaagt attgttttga tttatgattt caaaaaattt tcaataaaag
      661 gggtaaattt atggtgaaaa atggattatt attaactatt tttctaagta ttatcggtgt
      721 tttaggtgtc atttttattc atatttttgt tggagcgata atttttgttt taatcgctgt
      781 tttaatgatt tatttgctta gacaacacaa agatgagcaa ataatgatag ataaactttt
      841 ggttctttgt agagagttaa aagaaggaaa ttttgacaat agaattatct atgtaaaaac
      901 aaaaagcaaa aaattagccg aaatagcaga taatcttaac aatactattg atgggctaga
      961 agcttactta agggaaatta atacttctat ttcttgttct caaaaaggtg aattttatcg
     1021 caaggctttg cctgaaggtt taaaaggaat ttttgctcat aatatcgaat ttataaataa
     1081 agctttagca aacatagaag tgacagcaag atctactttt aaaaatgctt tatcaagaac
     1141 tttaatggat ttaagccttg gaaatcaaaa taaagacatg tctcaaattt ctagctcatt
     1201 aaatcaagat attagcatga tgaaaaatgt atatgataca gtggatgcca tttctcatac
     1261 agctacagaa aatggttcag aggtggattc tttgcaaagt gctatgggtt ctttaatgga
     1321 tgttgtaaat tcgagcaagg agacagtaca aacttttgtg gctaattcac aaaatatcac
     1381 ttcagtggtt gaagtaatac gcgatatagc cgatcaaacc aatcttctag ctttaaatgc
     1441 tgctattgaa gctgcgcgtg caggagagca tggtaggggc tttgcggttg tggctgatga
     1501 agttagaaag ttagcagaaa gaactcaaag atctacaagc gaaatttcta ttgcaattca
     1561 gactatgcaa caagattttg taaatatcca aagtggcagt gagcaagttt ttaacattgt
     1621 tagtgaatct gaagaaagaa ttaataaatt ttctcaagct tttaaacgtc tagaagaaaa
     1681 tagtagtgct cttggtgtta attttggatc ctttgcaaag agattgattt tgtctgtggt
     1741 taaaatcgat catattcttt ataaatcaaa tatatattta aatttaaatg gggctcaaaa
     1801 tttcaatctt gaaagtgtag atccaatttc taatctttgt caagatgaga gagctcaagg
     1861 tgttattaat gagcttagtt ctgaaactga gttaaattta gctaaagaat ttataaaaga
     1921 taacgctaaa aaagcaatag aagaatcaag tcaagattat atcgatcaaa aagcttatga
     1981 tgcgattgta aatgatatta aatcactaga gcaaagaagt gctgaaatct tagcaaaatt
     2041 aaaaatataa attaagaggg tgggaaaatg tcaagagaaa tttttttaca agaagatagt
     2101 ttaattactt ctaaaacgga tttaaaaggt aaaatagttt atgcaaatga tgatttttta
     2161 aagtatgcag gttatactat gggtgaagtt ttaaataaac ctcataacat agtaagacat
     2221 gaagaaatgc caaaaactgt ttttaaatat ttatgggatt atatgaaaga aggcaaagaa
     2281 atttttgctt acgtaaaaaa caaaaccaaa gataacaatt actactgggt ttttgcaaat
     2341 gtaactccat caatagacat taataataat atcataggct attattccgt tcgtcgtatg
     2401 ccaaataaaa gcgctatttc tacaatagaa agcctttata gtgatctttt aagagtagaa
     2461 cagcaacaag gtttaaataa gggtgttgag atgcttaaaa atttctgtaa agatgcagat
     2521 aaaacttata atgagctaat cttctctctt caagaagcta aataaatttt tgttagactt
     2581 aaaacgagtt tgttttaagt ctaaatatta tataatcttt ctttaaaatt cacatttttc
     2641 aaggcaaaat atgtttgatg tcattgttat aggtggtgga catgcaggtg ttgaagcaag
     2701 tgctgctgct gctagaatgg gtaaaaaaac tttactttta actacattga ttgagcaaat
     2761 aggagcggca agttgtaatc cggctatagg agggcttgct aaagggcatt tggtaaaaga
     2821 acttgatgcc atgggtggtc ttatgggcga aatcaccgat gaagcaggga tacaatttcg
     2881 cattttaaat gagagtaagg gtgtagccgt tcaaggaagt agggcacaaa ttgatatgga
     2941 taaataccgt atcattgcac gtaataaact tttaaaactt ccaaatttag aaatctctca
     3001 agaacaagcg agtgttttaa tcgtagaaaa tgatgaagtt aaaggcgtaa aaacaaattt
     3061 agaaaataca tattttgcca aaaaagtgat cctaacaaca ggaacttttt taaatggact
     3121 tattcatgta ggtgaaaata aacttcaagc aggaagggta ggggagcttg cttcggtaaa
     3181 tttaggaaat tatctacaaa ctttgggttt gaaaatgggg cgtttaaaaa caggaacttg
     3241 cccaagagtg gatgcaaaaa gcattgattt tagcgtgctt gaaattcaag atggtgatgt
     3301 aaatcctaaa gcttttagtt ttcgttcaaa aaatttcaat cctactcaac ttccttgtta
     3361 tatcgcacgc actaatacaa ctacacatga gattattaag aataattttt atcgtgctcc
     3421 actttttaca ggacagattg aaggtgtagg gccaaggtat tgtccttcta tagaagataa
     3481 aatcaaccgt tttagcgaca aagaaagtca tcatcttttt atagaacctc aaactatcga
     3541 tgcgacagag tattatatca acggtttttc tacttctttg ccttatgagg tacaaattca
     3601 aatgctgcgt tctgtaaagg gttttgaaga tgctaaaata acccgttttg gttatgctat
     3661 agaatatgat tatatagagc caactgaact taagcatact ttagaactta aaaagattaa
     3721 aaatctttat tgtgcaggac agattaatgg aactacaggt tatgaagagg ctgcagcaca
     3781 aggctttatg gcaggaatca atgcaagttt aagtatagat atgaaagagc ctttgatttt
     3841 aaggcgtgat gaagcttata taggagtttt aatcgatgat ttggtagtaa aaggtacaaa
     3901 agaaccttat agaatgttta cttcaagagc agaatttaga ctgcttttaa gggaagaaaa
     3961 tgctatactt agacttggaa aatatggcta tgatttgggg cttttaagcg agcaagattt
     4021 tacttatata caaaatattg caaacaatct tcaaaaagga cttgaatttt tactttctaa
     4081 agaatttacg cctaataacc aaaataatgc ttttttagag agtttaggag aagataaaat
     4141 ttcttctata gtcaatcttc aaaaaattgt tgcaagagca agttttgata tagaaaaatt
     4201 aaaaaaactt gatcctatgt ttgaaactat ggataattat tctttaagag aaattttaaa
     4261 cgaggcaaag tattatcatt atatcagcat gcaaaaagct caagtagaaa aaatgaaaaa
     4321 tcttagtgag cttaaaattc ctgaaaattt tgattttaaa agtgtaagtg gtttgagtaa
     4381 tgaggttgta gaaaagctta atcatcataa acctccaacc atttttgctg caagtcaaat
     4441 cagtggaatt actcctgcag cgttagatat tttacaaatt tatatcaaaa tgcaaaagaa
     4501 aaaagcttaa atgcttgctt tttttatttt tttatctact ttagttttac ttttttggcg
     4561 tccatggaat ttacctattt gggtattttc tagtttgggg gctttttttg tttttatttt
     4621 tcaattggta gattttaaag acgcttattt tgttttttct ttggtttggg atagttcttt
     4681 aactttagtt gggttgatta ttctttcttt tagcttggaa gctttgggat tttttgattt
     4741 tattgcgagt aaaattttgc atttttctag agagaaaaat caagaaaaaa tttatatcag
     4801 cacaaaaaaa ttgatgttat ttttgttgat ttttgtcttt tttctttctg cattttttgc
     4861 taacgatgga gcgattttaa tcattacacc tattattata gctttatttt caactcttaa
     4921 agattgtaaa aatcatgctt ttattttaag ttctttttta cttagtcttt cttttttatg
     4981 tgatgcaagt tcaaatgctt tggttatttc aaatttaacc aatatcatta cagcaaatta
     5041 ttttaagata gaatttttag aatttgctaa aaatatgttt ttgcccaatt tttttgtttt
     5101 actttctact atagttatgg tttttgtgct ttatgtgaga gttttgccta aaaggcttga
     5161 atttaaatta gtcaaaaaag agcaaatttc atcgaagttg ttttttcttt gcatagtat
//
LOCUS       DARBAC010000102         5053 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.102, whole genome shotgun sequence.
ACCESSION   DARBAC010000102 DARBAC010000000
VERSION     DARBAC010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5053
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.102"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(92..766)
                     /locus_tag="SB799_001462"
     CDS             complement(92..766)
                     /locus_tag="SB799_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEG0868690.1"
                     /translation="MQAIILCGGLGTRLKSVIKDIPKPMAPINNKPFLEFIFEYLKRQ
                     GIKEIILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKEALKFIKNEACVL
                     NGDTFFDIDLNKLKLNGGKIYLALKQMNDFDRYGTVNVDKQGFVISFEEKIFKTQGLI
                     NGGIYLLTKDIFNEFDLEKKFSFEEFLQENYKKLKARACIFDNYFIDIGVPEDYYNFI
                     TNQSHF"
     gene            complement(754..1359)
                     /gene="gmhA2"
                     /locus_tag="SB799_001463"
     CDS             complement(754..1359)
                     /gene="gmhA2"
                     /locus_tag="SB799_001463"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEG0868691.1"
                     /translation="MENLNSYIKGHFTDSILVKEQILKDENLITLIKNASLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ"
     gene            complement(1347..2366)
                     /gene="hddA"
                     /locus_tag="SB799_001464"
     CDS             complement(1347..2366)
                     /gene="hddA"
                     /locus_tag="SB799_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HEG0868692.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNVTISLYIHCT
                     LIEREDGKIIFDSPDTNSYCEYESKEHLENDGKLDIFKSIYNRIIKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAQILGKSWQSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALNKEQGWVQDFSFTKEGV
                     KSWRI"
     gene            complement(2363..3394)
                     /locus_tag="SB799_001465"
     CDS             complement(2363..3394)
                     /locus_tag="SB799_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002830388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEG0868693.1"
                     /translation="MRKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIY
                     HLSDRINKKDRIGIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFNIPIETLQ
                     TNIIGTANILENIRILKAKDGYDPIVHICSSSEVYGRAKAEVKLNEDTAFHGASPYSI
                     SKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVI
                     KVGNLSSVRTFQDARDAIRAYYLLSLESEKGKVPCGEAFNIAGEEVFKLPEVIDILLG
                     FSTRKDIKVEQDEERLRPIDADYQMFDNTKIKSFIDWKPEIPARQMFEDLLNHWRDEI
                     KKGRIPLNR"
     gene            complement(3404..4465)
                     /locus_tag="SB799_001466"
     CDS             complement(3404..4465)
                     /locus_tag="SB799_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEG0868694.1"
                     /translation="MNKDSKIYIAGHRGLTGSAIVKKLQNKGYSNLIFRTHSELDLTN
                     QKAVVDFFVKEKPEYVFLSAAKVGGIGANNTYRADFIYQNLMIQNNVIHQSYLNGVKK
                     LLFLGTACIYPRECPQPIKEEYLLTSKLEYTNEPYAIAKIAGLKMCESYNLQYKTNFI
                     SVMPCSLYGANDNFNLETSHVLPAFIRKMHLAKVLQEEGVAKVQYLLNFNDENEVKNY
                     LNRFGVTESSVEIWGSGKAMREFLHADDMADACVYVMEKVNFNDLYKNNDVEIRNTHI
                     NIGSGKDISIKDLAELVKRIVEYRGNLVFNTNKPDGTMKKLGSCKRINSLGWKAKIKL
                     EDGIQMMYEWYLKEQNIRQ"
     gene            complement(4465..5010)
                     /locus_tag="SB799_001467"
     CDS             complement(4465..5010)
                     /locus_tag="SB799_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HEG0868695.1"
                     /translation="MAIKFNIKESKILNGVYIITPNKFSDLRGDIWTAFTDEYLSNLV
                     PNGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEK
                     FIISPRNQQLILLPPNMGNSHYVSSKEAVYYYKLAYKGEYLDAPDQFTYAWNDKRIAI
                     DWPTNSPILSERDILAMNKDK"
BASE COUNT         1595 a          972 c          601 g         1885 t
ORIGIN      
        1 gtaaagtcaa tcatagcttg acctaattta taagctaaat gattttttac tctttctata
       61 gctgagtttg ggttatacat agggttttcc tttaaaaatg gctttggttg gttataaaat
      121 tataataatc ctcaggcacg ccaatatcta taaaataatt atcaaaaata caagctctag
      181 cctttagttt tttataattt tcttgcaaaa attcttcaaa agaaaatttt ttctctaaat
      241 caaattcatt aaaaatatct ttagttaaaa gataaattcc accattgatt aaaccctgtg
      301 ttttaaatat tttttcctca aaggaaatca caaatccctg cttatcaaca tttactgtac
      361 catatctatc aaaatcattc atttgcttta aagcaaggta aattttacct ccatttaact
      421 ttaatttgtt taaatctatg tcaaaaaaag tatcgccatt taaaacacaa gcttcatttt
      481 ttataaattt taaagcttct tttatagctc cacctgttcc taaaggctct ttttctatac
      541 tatattttat ttttatacct aaaaactcat ctttaaaata ttcttgtatc acctcatact
      601 tatatgaaac cgctaggata atctccttta tgccttgcct tttaagatac tcaaaaataa
      661 attctaaaaa aggtttatta tttatcggtg ccataggctt tggaatgtct tttataacgc
      721 ttttaagcct tgttcctaag ccgccacaaa gtattattgc ttgcaagaaa aacctttacc
      781 gaaaagctct tcttcgacaa tagcgcaaat aatatgccct atcaaaatat gtgcttcttg
      841 aattcttggt gtgcaagttg aaggtacttt tatacaataa tcacaaagtt cattcatagc
      901 cccaccatta gctccgctta agcctatact tatgatttct ttttgcttac aaagttctag
      961 agcctttagg atatttttac tatttccgct tgtagaaatt cctataaaaa catctccctt
     1021 aacaccttga gcttgcactt gtctagcaaa caaattttca taaccataat cattgccaat
     1081 agctgttaaa atacttgtat ctgtagtaag tgcaatactt gcgatccctg gtctatcaaa
     1141 ataaaatcta cttacaaatt cccctgcgat gtgctgtgca tctgctgcac taccaccgtt
     1201 tcctgcaagc aaggttttat tgccattttt gtaagctttt atgacttcta atgaagcatt
     1261 tttaataaga gttatcaaat tctcatcttt taaaatttgc tcttttacta aaatagaatc
     1321 tgtaaaatgt ccttttatat aggaatttaa attctccatg atttaacccc ctcttttgta
     1381 aatgaaaaat cttgcaccca gccttgttct ttgtttaaag ctttaattaa attgtatttt
     1441 ttagtaggat ctacaaagaa aaacataaat ccaccagctc ctgctccact ggttttacca
     1501 ctgtaagctc cattatctat agcaagttta taaattcttt caagctcatc gttgctaacg
     1561 atttctgaaa tgattttttt tgactgccaa gacttaccta aaatttgcgc caaagtatca
     1621 aaatccgcct taaataaagc ttctttcatc tttatagcat cttgctttat ggcatgcatg
     1681 gcctcaaggg atttttcatc tccaagtttt ccttttttat gctcttctat atcttttgct
     1741 tctcttgtga tatttgtaaa ataaagcaca gttctagctt caagctcact agctatccag
     1801 tttttaatac gcaaaggatt gacaatgact cttttattat cataaaattc cataaaatta
     1861 aagccaccaa aagttgcggc gtattgatct tgtgctccgc ctactatgcc taaatcttct
     1921 ctttctatct cataagcaag tttagcgatt tcatattccc ctaaaggtaa attaagccat
     1981 tctgcaaaag cttttataac ccctacaacc aaagtcgagc ttccacccaa gccactacca
     2041 cttggtacat ctgagtatgt atgcaaagaa aaactcaaag gtttttttgt aaaatctttt
     2101 ataatgcgat tataaatact tttaaaaata tctaattttc catcattttc taaatgctct
     2161 ttgctttcgt actcacagta agaatttgta tcaggagaat caaaaatgat ttttccatct
     2221 tctctttcga tcaaagtaca atgtatgtat aaagatatag tcacatttaa aacataacct
     2281 gtgtatttat cacaatataa atttatatca gttcccccac ctgctagacc gagacgaaga
     2341 ggagtttgtg tgcgtatggt tttcatctat ttaaaggaat ccttcctttt tttatctcat
     2401 ctctccaatg atttaataga tcctcaaaca tttgtctagc tggaatttct ggcttccagt
     2461 caataaaact tttgattttt gtgttgtcaa acatttgata gtctgcatca ataggacgta
     2521 gtctttcttc atcttgttct actttaatat cttttcttgt agaaaaacct aaaagtatat
     2581 caataacctc agggagttta aaaacttctt ctcctgctat attaaaagct tccccacaag
     2641 gaacttttcc tttttcactt tcaagagaaa gtagataata agcccttata gcatctctgg
     2701 catcttgaaa ggttcttaca ctcgaaagat ttccaacctt gataacaggc tcttgataac
     2761 ccgcttcaat caaagcaatt tgctttgcaa ctgtactttc aaaaaaaaca tcggaacgtc
     2821 tcgggccact atgtgttccc attcttgtaa caaaagtgcg aatgttataa gcttcgccat
     2881 aaaatcttcc taaataatcg gtgccgattt tgcttatact ataaggactt gcaccgtgaa
     2941 aagccgtatc ttcatttaac ttaacttctg cctttgccct accataaact tcacttgaag
     3001 agcaaatatg cactatagga tcataaccat cttttgcctt taaaattcta atattttcca
     3061 aaatatttgc tgttcctatt atgttagtct gtaaagtttc aatcggtata ttaaaagaag
     3121 tttttggata agactgagct gctaagtgaa aaatcacatc aggcctttga ctctcgaaaa
     3181 gtttttgaag actagagtaa tcatttaaat ctgcataaaa aataccgatt ctatcttttt
     3241 tatttatcct gtcacttaaa tgatagatat tatccatagg ttcttgccaa cgcatcatac
     3301 ctataacatc atagtctgtg ttttctagca agaaatctgc catttgagag ccaacttgcc
     3361 ctgtaaatcc tgtaattaac gctgtttttc tcatattttt ttcctactgt cttatatttt
     3421 gctcttttaa ataccattcg tacatcattt gaataccatc ttcaagcttg atttttgcct
     3481 tccagcctag agaattaatc ctcttacaac ttcctaattt tttcattgtt ccatctggtt
     3541 tattggtatt aaaaactaaa ttaccacgat attcaacaat gcgtttaaca agttctgcta
     3601 aatctttaat acttatatct ttgcctgagc ctatatttat atgtgtattt ctaatttcta
     3661 catcattgtt tttatataaa tcattgaaat ttactttttc cataacatac acacaagcat
     3721 cagccatatc atcagcatgt aaaaattctc tcatagcctt cccactaccc caaatttcaa
     3781 ctgaactttc tgtaacacca aatctattta agtaattttt aacttcattt tcatcattga
     3841 aatttaataa atattgcact ttagcaacgc cttcttcttg taatacttta gctaagtgca
     3901 tttttcttat aaaggctggt aaaacatgcg atgtttctaa attaaaatta tcatttgccc
     3961 catataaact acaaggcata actgaaataa aattagtctt atactgtaaa ttataacttt
     4021 cgcacatttt aagacctgct attttagcta tggcataagg ttcatttgtg tattctaatt
     4081 tacttgttaa aagatattct tcttttatag gttgtggaca ttctctagga taaatacaag
     4141 cagtccctaa aaataataat tttttaactc catttaaata agattgatga ataacattgt
     4201 tttgtatcat taaattttgg taaataaaat ccgctctata ggtattattt gctccaattc
     4261 caccaacttt tgctgcggat aaaaaaacat attctggctt ttcttttaca aaaaaatcaa
     4321 ccacagcttt ttgatttgtc aaatctaact cagaatgagt tctaaaaatt aaattactat
     4381 aacctttatt ttgtaatttt ttaacaattg ccgaacctgt taaacctcta tgtcctgcta
     4441 tataaatttt agaatcttta ttcattattt atccttattc attgcaagaa tatcacgctc
     4501 tgaaagaata ggagaatttg ttggccaatc tatagcgatt cttttatcat tccaggcata
     4561 agtaaattga tcaggagcat ctaaatactc tcccttataa gcaagcttat agtagtacac
     4621 ggcttctttt gaacttacat aatgagaatt tcccatattt ggcggcaata aaataagctg
     4681 ttgatttcta gggcttataa taaatttctc ccattttaga taagttggcg aatctttcct
     4741 acaatctacc actacttgat gcacttctcc atagacacaa gttacaagct tataagtttt
     4801 tacatcacca tgaattccac gtaaaacatt aaaatgagaa tttataaatt tatcatgctt
     4861 aaacttaatt ccatttggca ctaaattact caaatattca tctgtaaatg ctgtccatat
     4921 atcacctctt aaatcactaa atttattcgg agttattata tatactccat tcaaaatttt
     4981 agattctttt atattaaatt ttattgccat tatttaacct tctaatactt ttccattctt
     5041 tataaatatt att
//
LOCUS       DARBAC010000103         5049 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.103, whole genome shotgun sequence.
ACCESSION   DARBAC010000103 DARBAC010000000
VERSION     DARBAC010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.103"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            67..351
                     /locus_tag="SB799_001468"
     CDS             67..351
                     /locus_tag="SB799_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEG0868696.1"
                     /translation="MAVKITDICIACGSCIDECPVSAIVDDVNNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            464..877
                     /gene="ndk"
                     /locus_tag="SB799_001469"
     CDS             464..877
                     /gene="ndk"
                     /locus_tag="SB799_001469"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEG0868697.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIDFFFKPNEIC"
     gene            878..1231
                     /locus_tag="SB799_001470"
     CDS             878..1231
                     /locus_tag="SB799_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868698.1"
                     /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINSKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCNN"
     gene            1255..1401
                     /gene="rpmF"
                     /locus_tag="SB799_001471"
     CDS             1255..1401
                     /gene="rpmF"
                     /locus_tag="SB799_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEG0868699.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            1407..2393
                     /gene="plsX"
                     /locus_tag="SB799_001472"
     CDS             1407..2393
                     /gene="plsX"
                     /locus_tag="SB799_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEG0868700.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNENATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLRLGRLKGISRPAIATLMPNIINKTLLLDVGANTDCKAENLFQFAIMGEVY
                     ARAIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINELIENELGKYNA"
     gene            2386..3360
                     /locus_tag="SB799_001473"
     CDS             2386..3360
                     /locus_tag="SB799_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEG0868701.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENTSDLGTKAALKAIKRANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSNLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGDLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(3357..3707)
                     /locus_tag="SB799_001474"
     CDS             complement(3357..3707)
                     /locus_tag="SB799_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEG0868702.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDTLFEKIGACKGDLIQIQIWLANMQDFDAMNEIYDAWIKNYPKPIRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3704..4780)
                     /gene="serC"
                     /locus_tag="SB799_001475"
     CDS             complement(3704..4780)
                     /gene="serC"
                     /locus_tag="SB799_001475"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEG0868703.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLSLNGVCEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFNHIPRVEFSDNADYAYICSNNTIYGTQYQNYPKT
                     KAPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGELDKVHEKNSQKAAMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            complement(4790..>5049)
                     /locus_tag="SB799_001476"
     CDS             complement(4790..>5049)
                     /locus_tag="SB799_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEG0868704.1"
                     /translation="IDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQHENFF
                     NKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
BASE COUNT         1787 a          778 c          811 g         1673 t
ORIGIN      
        1 aaatttacat tatttaagaa ttttatgcta aaatctttta aatcttaata ttaaaaagga
       61 gaaaaaatgg ctgtaaaaat tacagatata tgcattgctt gtggttcttg tattgatgag
      121 tgtccagtga gtgctatcgt tgatgatgtt aacaatccag aaggcgaaga tagatattat
      181 gtttatgcaa acaaatgcgt tgaatgcgta ggacataatg atcaacccgc ttgtgctagt
      241 gcttgcccaa cagatggatg tatagtttgg agtgctgtag aatcaggaca accaagtcgt
      301 gataatattg gcgctgatat gagaagtggg gacactccag tttttgcata attttaaaaa
      361 attaaaaagc tagagattcc tagctttttc ttttaattta actttcttta aacaaattca
      421 agtataattt taagctttat taaaataagg agttattaca aagatggaaa aaactttatc
      481 tataattaaa cctgatgctg ttaaaaaagg tgttatagga aaaattttag atcgttttga
      541 aagcaatgga ttaagaatcg ctgcaatgaa aaaagttcaa cttagtaaag aacaagctga
      601 aaatttttat gctgttcata aagaaagacc tttttttaaa gacttggttg aatttatgat
      661 tagcggtcct gttgttgttt ctgtactaga aggagaaggt gctgtattaa aaaatagaga
      721 tttaatggga gcgacaaatc ctaaagaagc taaagcagga acaattagag ccgattttgc
      781 tgagagtatt gatgctaatg ctgttcatgg aagtgacagc ttggaaaatg caaaaataga
      841 aattgatttt ttctttaaac caaatgaaat ttgctaaatg aaaatccctt tttctaagat
      901 taatacaaag gaatatcctt ttaaacttaa tcttgaaaat atgatttttg agggaaattt
      961 agtaaaaata aattctaagc ttgttaaaat aaatgctatt atgcaaggtt ttatctatag
     1021 accttgtgat agttgtggaa ctgagttaga acttgaaatt aaagaaaatt tagaactttt
     1081 tgcaagtgat ggtattttta aagatgaagc aaacgaattg agcaatacta tagaattttt
     1141 cgatggacat attgatttaa tagaagttgc tatcagcgag cttgaagctt atttaagtga
     1201 ttatttttat tgcataaatt gcaataatta attaaatttt ataaaggaga aaaaatggca
     1261 gtaccaaaga gaagagtgag caaaactcgt gcagctaaac gcagaactca ctataaagtt
     1321 agtcttccta tgcctataaa agacaaagat ggaagctaca aaatgcctca ccgtgcgaat
     1381 ccaacaacta aggaatatta aaatcaatga ttaacattgc cattgatgca atgggtggtg
     1441 attttggaga aaaacccatt atagaaggcg ttttaaaggc gctagaagca aaacctttta
     1501 acgctatctt agtgggaaat tctaaaattc taaaaccttt aataccaaaa aaattagaac
     1561 aatatataca atacgaagaa gctagtgaaa ttttttcgat gaatgaaaat gccacagatg
     1621 ctttaaaaaa taaagaaaca accatataca aagctattaa tttattaaaa gaaaaaaaag
     1681 tagatgctgt agtttcagcg ggtcatagtg gagcaagtat gtctttggct accttaaggc
     1741 ttggaagact taaaggcatt tcaagacctg ctattgccac tttaatgcca aatatcatta
     1801 acaaaacttt acttttggat gttggagcta atacagattg taaagctgaa aatttatttc
     1861 aatttgccat aatgggtgaa gtttatgcta gagcaatcat gcaaattcaa aaaccacgcc
     1921 ttgctttact ttctaatggt gaagaagaat gcaaaggtaa tgaacttacc aaagaaagtc
     1981 atcagcttat gaaaaaaatt ccaaatttta taggtaatgc tgaaggtaga gatattttca
     2041 atggtgaaat agatgtttta gtctgtgatg gttttgatgg aaatgttatt ttaaaggctt
     2101 gcgaaggtgt agcaacagct atttttcaac ttctaaaaaa cgaagtaaaa caatctttta
     2161 tttctaaaat aggtgcttta cttatgaagc catcttttaa aaaattaaaa aaacacacag
     2221 attggcaaga atatggcgga gcaccccttc ttggagttaa tggctgtgtg atcataagtc
     2281 atggaaaaag cgattctaga gctattaaaa atgcaatttt tcaagctata aattttagcc
     2341 aatctcatat caatgaactt atagaaaatg aacttgggaa atacaatgct taaagccagt
     2401 cttaaaagta tagcttctta tattccagaa aaaattttaa gcaatgctga tcttgaaaaa
     2461 atggtagata ccaccgatga atggatcact agacgcacag gtattaaaga aaggcgcatt
     2521 gctagtgaaa atgaaaatac tagcgatttg ggcacaaaag ctgcattgaa agccataaaa
     2581 agagcaaatt taaaacctga agatattgat gctattctcg tagccacttt aagtcctgat
     2641 tattttacta tgccttcaac agcttgtaaa attgcttcaa atttaggact cgtaaatatc
     2701 agtgcttttg atatttcagc agcttgttct ggttttatct atttacttga acaagctaaa
     2761 gctttggtag aaagtggttt gaaaaaaaat gttttaatca taggagctga aaaaacaagt
     2821 tccattatgg attacaatga cagaagtatt tgcatactct ttggagacgg tgcgggtgct
     2881 ggagttgtaa gcttggataa tgaaaatcac atccttgatg tacatactgc aagcaatggt
     2941 aattatggag atcttttaat gactcaaaga tcgcaaaaat caaacctatg tcaaacactt
     3001 tctatgcaaa tgaaaggcaa tgaagttttt aaaatagcag taaacacact tagcaatgat
     3061 gttgtagaaa ttttagccaa aaataacatt ttagcacaag aaattgatct ttttattcct
     3121 catcaagcta atctacgcat cattaaagcc gtccaagaaa aactcaatct aagcgatgaa
     3181 aaatgtgtga ttaccgtaca aaaatatggc aatacctcag ctgcttctat acctatggca
     3241 atgaatgatg cctatgaaga aggtcgactt aaaaaaggag atctaatctt actagatgct
     3301 tttggcggtg gttttacttg gggatctgca cttttaaaat ttggaggaga gaatttttaa
     3361 ttctctctta gctttccaaa agcttgaatt tccaccaaat aaccctctgc taaagcactt
     3421 cctacacaag ctctaatagg tttagggtaa tttttaatcc aagcatcata aatttcattc
     3481 attgcatcaa aatcttgcat attagctaac cagatttgaa tttgaatcaa atctcctttg
     3541 catgcgccta ttttttcaaa caaagtatca agttctgcaa gtgcttcttt agtttgtttt
     3601 ttaatatctc cgctaggttc aaaagccact tgtcctgcag ttttaaaata tttatcaaaa
     3661 acaataattt gcgacattct atcgcactca tcaaaacgct ttatcatgca tattttcctt
     3721 gaaattcttt cataaattca cacaaggttt ttacctgatc caaattaagc gcattataaa
     3781 tacttgcacg aattcctcct aaaattctat gtcctttaag tcctatcatt ccagcttctt
     3841 cggcttcctt tacaaaaaga ggctctaaat ctttattttt agcaatatta aaactcacat
     3901 tcattaaaga tctatccttt ttatctgcat gtcctttata aaatccattg cttaaatcaa
     3961 tacactcata aagcatagca gctttttgag aatttttctc atgtacttta tcaagttcgc
     4021 cttgatttaa aagccaatcc atttcaagat taaacatata aatagcaaag gttggaggcg
     4081 tgttaaacaa ggactgattc tcagcatgag tcaaataatt taacatacta ggaatttgtt
     4141 tatttttaga tctttctaac atatctttac ggataaaaat acaacttaaa cccgaaattc
     4201 cagcattttt ttgcaccccg ccataaaaaa gagcgatatt tgaaaaatct acttttctag
     4261 aaaaaaaatc actcgatgca tccacaatca aaggagcttt agttttagga taattttgat
     4321 attgagtgcc gtaaatagta ttgttagaac aaatataagc ataatcagca ttatcactaa
     4381 attccactct aggaatatga ttaaaattac tttcctcgct acttgctacg gttttaacat
     4441 tgacacctaa aatttgcgct tctttaattg ctttttttgt ccaaactcct gtatttgcat
     4501 attcacaaac cccatttaaa gacaaattca taggaatcat agcaaattgt aaacttgctc
     4561 caccttgtaa aaataatact tcataatcat catttaaccc gtaaagtttt ttagctttct
     4621 cttgtgctcc aaaatgcact tcttcaaata cttttgtgcg gtgagaaatt tccattatag
     4681 aataacccct accctgataa tcacagagtt ctttttgagc ttgctctaaa atttctaaag
     4741 gtaaagtcga tggccctgca ctgaaattga tttttctcat aatctatcct tataaaattt
     4801 ttgcttcttt ttgagaagtt tgagaactta aaataacaat atcatcactc ttaagatctt
     4861 ctaaatttgc tattttacca ttttttctga tacaaataaa ctttttgctt ttattaaaaa
     4921 aattctcatg ttgcaaataa gcattttgca atttatctaa ttttaattca ttataacgca
     4981 tttgatttgc tagtagatga tttaattgct tttctatatt atggctttgt tttatttttt
     5041 catctatta
//
LOCUS       DARBAC010000104         5042 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.104, whole genome shotgun sequence.
ACCESSION   DARBAC010000104 DARBAC010000000
VERSION     DARBAC010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5042
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.104"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..813
                     /locus_tag="SB799_001477"
     CDS             <1..813
                     /locus_tag="SB799_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868705.1"
                     /translation="GNFKLNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIKEDI
                     EERIKESLMCLNLNESLLNKYPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFLDKN
                     TTLLFKKAILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFELEN
                     QGVKFCNFIDFSNCKKYKDFKKPPSKIAIDPYKISFFNSKNIPKNNYEFILEKCYIIA
                     LRSRKSDVFIRVSCMDKILEFALEKQEFLKFDLKLYEELSLYFYEDAICFLN"
     gene            951..2924
                     /gene="acs"
                     /locus_tag="SB799_001478"
     CDS             951..2924
                     /gene="acs"
                     /locus_tag="SB799_001478"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEG0868706.1"
                     /translation="MLNQNNQELFKPSKEFSRNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQALEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYTSPTAIRMLHADAPDEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGGTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFY
                     DKNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDAIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSGVVETIVKLAKAEFE"
     gene            3006..3830
                     /gene="galU"
                     /locus_tag="SB799_001479"
     CDS             3006..3830
                     /gene="galU"
                     /locus_tag="SB799_001479"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEG0868707.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGKPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVIFGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            3824..>5042
                     /locus_tag="SB799_001480"
     CDS             3824..>5042
                     /locus_tag="SB799_001480"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEG0868708.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLSL
                     IDESLAFIKDKEHIKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
BASE COUNT         1772 a          640 c          976 g         1654 t
ORIGIN      
        1 ggaaatttta aacttaataa taaacaaaag cgtgaaattt atttgctttt tccagagcct
       61 attttgttaa atcgtagcgt aagggcaaat tttttattta ccttaaaaac ttatgggatt
      121 aaagaagata ttgaagagcg cataaaagaa agtttgatgt gtttaaattt aaatgaaagt
      181 cttttaaata aatatcctaa tgaactttca tcaggacaaa gtcaaaaaat agcttttgct
      241 atagctttaa gcgtaagagc gaagtattat ttacttgatg aaccgagtgc ttttttggat
      301 aaaaatacta cacttttatt taaaaaagct attcttaaaa tgcacgaaaa tttcaataca
      361 ggttttttaa tcgcaagtca tgataaacat tttttagatt ctttggctca aaaaaaactt
      421 tatttacaca gtggagaaat tttagaattt gaaaatacta atgtttttga actagaaaat
      481 caaggtgtga aattttgtaa ttttatagat tttagtaatt gtaaaaaata taaagatttt
      541 aaaaaacctc caagtaaaat tgctattgat ccttataaaa tttctttttt taattctaaa
      601 aatatcccaa aaaataatta tgagtttatt ttagaaaaat gttatattat agcacttaga
      661 agcaggaaaa gtgatgtttt tataagggta agttgtatgg ataaaatttt agaatttgcc
      721 ttagaaaaac aagaattttt aaaattcgat ttaaaattat acgaagaact cagtctttat
      781 ttttatgaag atgcaatatg tttcttaaat taacatacat tataaatttt aaataaaata
      841 ttacaaatat tcccattttt tataaaattt atcttaatta ttttttaaat ttgtatttaa
      901 tacaaataaa ctcttatata atgtttaaaa ataaccataa aggagttttt atgcttaatc
      961 aaaataatca agagcttttt aagccaagta aagaattttc tcgtaatgct cgtataaaaa
     1021 atttatgtga atactatgat ttatgcgatg aagccaagga agattttgaa ggtttttgga
     1081 aaagacaagc acttgagaag atcgagtggt tttcgccttt ttcaagagtg ttaaatgagg
     1141 ataaagctcc attttataaa tggtttgaag gtggaacttt aaatgtaagt tatcaatgtc
     1201 ttgatcgtca tatgaaaaca agacgcaata aagctgcttt gatttttgaa ggtgaaatgg
     1261 gggattatga agtttatact tatagaagat tattgcatga aacttgcaag gcggccaatt
     1321 tgcttaaaaa attcggagta aaaaaaggcg atagggttgt aatttatatg cctatgattc
     1381 cagaaacagc tatagtaatg ttagcttgtg caaggattgg ggctattcat agtgtggtat
     1441 ttggagggtt ttctcctgaa gccttaagag atagaattat agatgcagga gctaaacttg
     1501 tagtaacggc tgatggtgct tttcgtcgtg gcaaacctta tatgttaaaa cctgcagtag
     1561 ataaggcttt aagtgaaggg tgtgaaagtg tagaaaaagt acttatagtt atacgcaata
     1621 atgagcctat agaatatatt aaaggaaggg actatgttta taacgaactt gtgaaaaatg
     1681 agtcttataa gtgtgaaccc gaaatcatgg atagcgagga tttgttgttt ttgctttaca
     1741 cttcaggatc aacgggcaag ccaaaaggag ttatgcatgc aagtgcagga tatatacttt
     1801 gggcacaaat gactatggaa tgggtttttg atattaaaga ttatgataat tattggtgta
     1861 gtgctgatgt gggttggatt acaggacata cttatgtagt ttatgggcct ttagcatgtg
     1921 gagcaacgac tataatgcat gaaggaactc ctacttatcc aaattctggg cgttggtgga
     1981 gaatgataga agagtatcaa ataagcaaat tctacacttc gccaactgcc ataagaatgc
     2041 ttcatgctga tgcacctgat gagccaagaa aatatgattt aagtacgctt gaagtgcttg
     2101 gaacggttgg agagcctatc aatcctagtg cttggaagtg gttttatgat gaaatagggg
     2161 gaactaaaag tcctatagtc gatacttggt ggcaaacaga aacaggtggg catatgatca
     2221 cgcctttacc aggcgctact cctttaaaac caggttgtgc taccttgcct ttgccaggaa
     2281 tttttgcaga agttattgat gaagaaggca ataaaaaaga tgaaggtgaa gatggattgc
     2341 tttgtataac caaaccttgg ccttcgatga ttcgtggaat ttggggtaat gatgaacgct
     2401 atatagaaag ttatttttct caagctaaaa aagatggaaa agctgtatat tttagtggcg
     2461 atggtgcttt ttatgataaa aatggttata taactatcac aggaagaaca gatgatgtgg
     2521 ttaatgttgc aggacatcgt ataggaacgg ctgaaattga aagcgctatt gctaaacatc
     2581 caagtgtagc agaatcagct gtagtgagta ttttggatgc gattaagggc gagtcactgt
     2641 ttgcttttgt ggttttaagt cctgcatcca gttgtgatct tggcggagct atagaaactt
     2701 taaaagaact taatgacatt ttaagagtag aaataggacc tatagctaaa atagaaaaaa
     2761 ttctttatac tccaggtttg ccaaaaacta gaagtggtaa aataatgaga agaattttaa
     2821 gaactatagc aagaggtgaa gaaatcaaac aggatatttc aacgctcgaa gattctggag
     2881 tagtagaaac tattgttaaa ttagctaagg cagagtttga ataacaaggc aaaaagaact
     2941 ttgccttgtt gcataaaaat tcataaaaat aagctataat gataaaaaaa taaaaggaaa
     3001 tttttatgct tcaaacttgt attttccctg cggcaggtta tgggacgaga tttttacctg
     3061 caacaaaaac tttacctaaa gagatgttac ctatcttaac taagcctttg atccattatg
     3121 gggttgatga agctttggaa gcaggaatgg aaaatatggg ctttgtcaca gggcgtggaa
     3181 aaagagcttt ggaggattat tttgatattt cttatgaact tgagcatcaa atttcaggta
     3241 caaaaaaaga atacttactt gatgaaattc gctctttgat caatcgttgc acctttactt
     3301 ttacaagaca aaatcaaatg aaaggattag gtgatgcggt tttaaaaggt aaacctttgg
     3361 ttggtgatga agcttttggc gtaattttgg ctgatgattt gtgtgtcaac gaagaaggct
     3421 taaatgttat ggctcaaatg gtaaaaattt atgaaaaata tcgctgcacc atcatagctg
     3481 tgatggaagt accaaaagaa caagtttcaa actatggagt aatttttgga aattttgtag
     3541 aagaaaatct tatcatggtt aattctatga tagaaaaacc aagtcctgat gaagctccaa
     3601 gtaatcttgc tatcatagga agatatattt taactcctga tatttttgga attttagaaa
     3661 atactaaagc gggaaaaaat ggcgaaattc aacttaccga cgcgctttta actcaagcaa
     3721 ccaatggtat ggttttagct tataaatttc aagggaaacg ctttgattgt ggaagtgtag
     3781 aaggctttgt agaggctaca aattattttt acgagaaaag taaatgttaa acaatacact
     3841 tttttttaaa caaagtgaaa ttcatactat aagctcttat gcaaatcgta ttaatgatga
     3901 ggtaaaaagt ggagatatag ggtattatca tcttattgac acgagcttaa gcctgattga
     3961 tgagagtttg gcttttatca aagacaaaga acacataaaa aatattgttt tagtgggaat
     4021 gggtggttca agttgcggtg taaaagcctt gcgtgatatg ctttttaatg aaaaaagtaa
     4081 tcaaagagaa ctttttatac tcgataacac aagttcacat tcttttaata agactttaga
     4141 aaaaatcaag cttgaagaaa gtttgttttt aatcatcagt aaaacaggta gcactataga
     4201 agtcgtatcg ctttttaaac ttcttattga acattttaaa cttgatatgc aagaattaaa
     4261 aaaatacttt gtttttatta ccgataagga ttcaaaactt catcaagaag gtgaaaattt
     4321 aggtattaaa tgctttttta tccctgcaaa tgtaggaggt cgttttagca tactttcagc
     4381 cgtaggtata gttccgcttt gtttttgtgg ctataatgcc aaagctcttt tggaaggagc
     4441 taaagcttgt tttgaagatt tttttactca caaaaaagat gaaattttac aaaaagccta
     4501 ccattattgc acgcataaaa atgccaatat caatgtactt ttttcatata gtgatgcttt
     4561 taaaggcttt aatgaatggt atattcagct tattgctgaa agtttaggta aaaagcaagg
     4621 ctataaacgc ataggtttga ctcctattgc acttattggc gcaagagatc agcatagttt
     4681 tttacaactc atcatggatg gacctaaaaa taaaactgta acttttttaa aaatcaaaga
     4741 cgctcaaaaa gcacctatta tccctgatat tcattttaaa tttttagatt ctttaagcaa
     4801 taaagtcaat cttcacgaac ttttaaacgc tcaatgtgat gcaactatgc acgctttaat
     4861 cgctgaaaat ttgagtgttg atgtgataga acttgaaaaa cttgacgctt ggcatgcggg
     4921 atatttgatg tattattatg aactttttac ttcaacttgc ggtgttatgc tagggattaa
     4981 cacttatgat caacctggtg tggaagttgg aaagttgatc ttaaaaaata tattaaattc
     5041 tt
//
LOCUS       DARBAC010000105         5021 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.105, whole genome shotgun sequence.
ACCESSION   DARBAC010000105 DARBAC010000000
VERSION     DARBAC010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5021
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.105"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(64..573)
                     /locus_tag="SB799_001481"
     CDS             complement(64..573)
                     /locus_tag="SB799_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 family protein"
                     /protein_id="HEG0868709.1"
                     /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFEIRKCYLILS
                     ILNQKQVGGEIFNDKNVRNAKMQNTSVSYTIEIIDTLPGNTYKEFRANVPFPPSFNNP
                     EFYHTLKCI"
     gene            complement(573..1103)
                     /locus_tag="SB799_001482"
     CDS             complement(573..1103)
                     /locus_tag="SB799_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HEG0868710.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKTAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQVQRIAFEN
                     FNYENNYTIRLVSECF"
     gene            complement(1116..2204)
                     /locus_tag="SB799_001483"
     CDS             complement(1116..2204)
                     /locus_tag="SB799_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HEG0868711.1"
                     /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(2217..3131)
                     /gene="ilvE"
                     /locus_tag="SB799_001484"
     CDS             complement(2217..3131)
                     /gene="ilvE"
                     /locus_tag="SB799_001484"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEG0868712.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKDLENAQIELLKANNFQSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     SVTKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3308..3514
                     /locus_tag="SB799_001485"
     CDS             3308..3514
                     /locus_tag="SB799_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEG0868713.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKANK"
     gene            3511..3966
                     /gene="bcp"
                     /locus_tag="SB799_001486"
     CDS             3511..3966
                     /gene="bcp"
                     /locus_tag="SB799_001486"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HEG0868714.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVTSHEKFISKFNLKHILLSDSEKEVVKAY
                     RAWGLKKNYGKEYEGIIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
     gene            3966..>5021
                     /locus_tag="SB799_001487"
     CDS             3966..>5021
                     /locus_tag="SB799_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEG0868715.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSSVNKQILPASIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLNEESLKQNLKEG
                     FYRSTKDEMVFVEFWRFNTFFKNKWKNFEDFLKRPLSVQAEIKWRNKLFGTYNLSPII
                     ILENILPSRYEVIAKSEI"
BASE COUNT         1702 a          687 c          820 g         1812 t
ORIGIN      
        1 attattgttt tgttatgtga ataattaatg tattttagaa tttttgctag ttgatttctt
       61 gaatcaaata cattttaagg tgtgataaaa ttcaggatta ttaaaacttg gaggaaaagg
      121 aacattggct ctaaattctt tataggtatt acctgggagt gtgtctatga tttctatagt
      181 ataagaaaca cttgtatttt gcattttagc gttacggaca tttttatcat tgaaaatttc
      241 tcctcctact tgtttttggt ttaatatgct aagtatcaaa tagcattttc tgatttcaaa
      301 tttagtaaga ttttgaactt ttccacttac tataacgctc tcatgtctta gatctcttgt
      361 gtaggttagt ttgctaagat cggcttgagt ggtgaattga ttgattgtca gaaaaataga
      421 atatatcaaa agtgcggtaa aaatagtagc tatggtataa gaaatcaaag ccatttcttt
      481 ctgtttgact tttagaaaga ttaaaataca aatcaaggca aagcaaataa gtaaaatgat
      541 aaaagctata atatgaaaaa tcgtaaaatg cattaaaaac actccgaaac taagcgtatg
      601 gtatagttat tttcatagtt aaaattttca aaagcaattc tttgaacttg ggttgcgttt
      661 ttctttagat ctttaatttc tctacttttt tgtctaaaag ggataaattt ctttttatat
      721 tcttctatga tattatcatt aggtatttta tctgcaaaaa ttttagctgt aattttacat
      781 tctttaaaat tattttttga attatttgta atgttaaaat caacaattaa atcatttgag
      841 ctttgtatca ttttttgatc tgtaatagcg gtttttcgag ttcttacttc attgtctatt
      901 agtttatacc catagatata aactaaaaaa caaataataa tatcaaatgc gataataaaa
      961 agtgccgcta taggcctatg gcgtaaaaat acacaaagaa gtaaaacaca agtgaagaga
     1021 aaaaaaacta ataaaatcag catataatct actaaatata aatgagtagt gtaaaaaagc
     1081 acgatttctc ttagtttttc cacttgcgta tccttttagt tcatgttggc agcactttgc
     1141 tttttagcat ctttggtatc aacccaaatg tttggcactg ctccacctgg agttaagaaa
     1201 attttagcat cttgattgac ttttaaggct tcattaaatt ctttttgagt ttcaatttgt
     1261 tttaaattta gcaaaggggt gtttaagctg tttgcaattt ctttattaga ataagcttgt
     1321 gcatctgctt ctatcttaac agccatagct ttacctttgg cactgattat ggttgcattt
     1381 gcttcccctt cagctaaagc agcttttttt aaggcttctt gattagctct ttctacttca
     1441 tatttagttc tttcagcctc ttgttttgca atttgcacgc gttcgatttg ttcttttact
     1501 tttgaaggta aaataatttc tctaagttgt acagcgcgaa gttctacagg ttcgtttggt
     1561 tgggcttcta tggtttttct tataccttct tctatttgag cggctattgt attacgatta
     1621 gtaggaagtt cttcggctgt atattttcct acaacacttc gcactacatc acgaacaact
     1681 ggatcgataa ttttattttc ccaatttaag ctccaagtag ctatggtttg aggaacttgc
     1741 aaaggattta aacggtattg tactgtaaca tcaatagata caggcaatcc acgagaatca
     1801 agtacagaaa tactattttt attaataaca cctgaacctg aagataaatt ttcattactt
     1861 ccctctatag aagcatagtt gatttgtctt actctagtat cgattatggt tattttttgc
     1921 acaaaaggta agaaaaagtg aagtcctggt tctaatggat ttgggtcata tttacctgtt
     1981 gttgatttaa tccccatttc cccagaattt atcaccataa aaggttttgc aacgattaaa
     2041 aataagataa taataatcac cccataaaca aatggagaga atttcccaaa acctttaaaa
     2101 ttaaattctg gtgctttgaa attgaaattt tgacggttgt tgtttccgtt attgttagaa
     2161 tttccatttt ttttattgaa ataatcattc aaatcagctg gcatttattt ccttttttaa
     2221 atataagtta gcatagatgc gtatttttca ttgcgtccat aaactacatc aaaataagca
     2281 tcttgaagtt ttttagttac agatcctctt aaaccatttc ctattattct tgcatcaata
     2341 ttgttaatag gtgtgatttc agcggctgtt ccggtaaaaa atgcttcatc agcagtataa
     2401 acttcatctc ttgaaattct ttggcgaagc acggtgatac caagatcatg agcgatttta
     2461 agcactgtat cttgagtaat gctttttaaa gaaaaatcat ttggaggtgt gattaaaacc
     2521 ccatctttta caataaagaa acattctcct gttccttctg cgataaaacc ttcttcatca
     2581 agcattaaag cttcttcata tcctgcttca atagcttcaa attttgcaat ttgagagtta
     2641 agataatttg cacttgcttt agcttttccc atgcatgatt taacactatt tcttgcaaaa
     2701 gacgaaattt ttacttttat gcctttttct aaaccttctt ctccaaggta agcaccccat
     2761 tcccaagctg caattccaac tcttacagga gcttttatat gataaagtcc cataactcca
     2821 tcgcctaaga aaatcagagg gcggatatag acattgcttt gaaaattgtt tgcttttaag
     2881 agttcaattt gtgcattttc aagatctttt tgagaaaaag gacaatttaa aagagtaatt
     2941 tttgcagact ctaaaagtct tttggtgtga tcttcaagtc tgaaaattgc taagccttta
     3001 tctgttttat aggctctagt tccttcaaaa acagcattgc cataatgcaa agaatgggtt
     3061 aaaaagtgca aagttgcatc tttaaaatca actaattttc catccatcca aattttatct
     3121 gctgagatca tttttttacc ttttatagtt gtttatttct taaaaaatat tattttaaga
     3181 ataaatcggg attttatcaa aaatatacta acaataagct tttattaaat taaggttttt
     3241 tattaaaaaa aatattaggt attttttgaa ataattatga aaaattatcg ttaaaaaagg
     3301 agaaattatg ccattagtaa atatcaaatt agcaaagccg tctttaagca aggaacaaaa
     3361 agcggaactt atagctgata ttactgaact tttaagcacg aaatataata aaagtaaaga
     3421 aagagttgtt gtggttttag aagatgtgga aaattatgac ataggctttg gcggagaaag
     3481 tgtagaagct atcaaagcaa aggcaaataa atgagtttaa atataggaga taaggcacct
     3541 caatttgagc ttttaaatca agatggggta aaaatagcat taaaagattt tattggcaaa
     3601 aaggtgattt tgtattttta tccaaaagat aataccccag gttgtactac agaagcttgt
     3661 gattttagtg caaattatga taaatttggt ggtaaaaatg cagtgattat tggtattagt
     3721 cctgatagtg tgacaagtca tgaaaaattt atttctaaat ttaatttaaa gcatatttta
     3781 cttagtgata gcgaaaaaga agttgttaaa gcttatagag cttgggggct taagaaaaat
     3841 tacggaaaag aatatgaagg catcattcgt tctacttttg ttatcgatga aacaggtaag
     3901 attgctcaaa tttatagtaa tgttcgtgta aaagatcatg ctttaaaagt gcttgaaagt
     3961 ctttaatgct ggtgcatatt tgttgtagtg tagatagtca ttattttatt gaagaactta
     4021 gaaagactta tcctgatgaa aaaatcatag gatattttta tgatccaaat atccatcctt
     4081 taagcgaata cgaactaaga tttttagatg taaaaagatc ttgtgataaa cttggcatca
     4141 agctttataa aggtgagtat gagtatgaaa aatggcttaa tgctgtgcgt ggttatgaag
     4201 atgagcctga aaaaggtgca aggtgtgaaa tttgctttga tgtaagaatg ggatctagtg
     4261 ttaaatttgc tgctaaaata ggagaaaaaa agcttactac tacgctttta accagcccta
     4321 aaaaagattt agaacagtta aaaaatgctt tacaaaaaga atgtgagcct tatggggtgg
     4381 agtttttagc tcctgatttt cgtaaaaatg gtggcactca aaggcagttt gctttagcaa
     4441 aaaaagaaat gctctatcat caaaactatt gtggttgtat ttatgggctt aaaaaacaaa
     4501 aacaagataa gaatttcatt gatgaattaa tgtcttctgt aaataagcaa attttacctg
     4561 caagtataga agcaagaata gctctttata aaaaagtagt tttatgggaa aaaaagggta
     4621 taaaatttga aattttaaga gagaaatttt taaattatcg tcttttaagc gctttgataa
     4681 aattagataa aaagcctgtt aaatctcata ttttatttta ttcgcatttt aaaaacgctt
     4741 atacaagatt ttctttaaat gaagaaagct taaaacagaa tttaaaagaa ggtttttata
     4801 gaagcaccaa agatgaaatg gtttttgtag aattttggcg ttttaataca ttttttaaaa
     4861 ataaatggaa aaattttgaa gattttttaa aaagaccttt gagtgtgcaa gcagaaatta
     4921 aatggcgcaa taaattgttt ggaacttata atcttagccc tattatcatc cttgaaaata
     4981 ttttaccttc aagatatgaa gtgatagcaa aaagtgaaat t
//
LOCUS       DARBAC010000106         5004 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.106, whole genome shotgun sequence.
ACCESSION   DARBAC010000106 DARBAC010000000
VERSION     DARBAC010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.106"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            14..463
                     /locus_tag="SB799_001488"
     CDS             14..463
                     /locus_tag="SB799_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEG0868716.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LAEFKKLNEEAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM"
     gene            530..1567
                     /locus_tag="SB799_001489"
     CDS             530..1567
                     /locus_tag="SB799_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868717.1"
                     /translation="MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIF
                     NFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKI
                     PIILSTNIKDLNINGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNF
                     YSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFE
                     VISFDKFSLGF"
     gene            complement(1564..2298)
                     /locus_tag="SB799_001490"
     CDS             complement(1564..2298)
                     /locus_tag="SB799_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEG0868718.1"
                     /translation="MKPIIIFLSLFLIPLFAADDLKSGFGEEYYKLDIDQKRQIFFTK
                     MNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFA
                     EYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKH
                     KIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERK
                     GYYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(2273..3022)
                     /locus_tag="SB799_001491"
     CDS             complement(2273..3022)
                     /locus_tag="SB799_001491"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEG0868719.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFVHHINKINPNMSFLTGAGVIKAK
                     VNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFAYKNEELFFEGKVKYCFEANYNFS"
     gene            complement(3019..3624)
                     /locus_tag="SB799_001492"
     CDS             complement(3019..3624)
                     /locus_tag="SB799_001492"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEG0868720.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHEILDENA
                     LELEKIFSPFSLKNLLTKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM"
     gene            3685..4674
                     /locus_tag="SB799_001493"
     CDS             3685..4674
                     /locus_tag="SB799_001493"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEG0868721.1"
                     /translation="MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPSGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE"
     gene            4734..>5004
                     /locus_tag="SB799_001494"
     CDS             4734..>5004
                     /locus_tag="SB799_001494"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868722.1"
                     /translation="MKNIVFHSDGFGDLLVCFKALYAIKQLYPEYKLFLLTNGLMESD
                     FLEKIPFIDEVLIYKDDFLEKIQSKNPVIFITTRRQGLYFKKLKFL"
BASE COUNT         1701 a          696 c          773 g         1834 t
ORIGIN      
        1 aaaggagtca atcatgtcag ttacaaaaca attattacaa atgcaagcag atgctcatca
       61 tctatgggtt aaatttcata attatcactg gaatgtaaaa ggtttgcaat ttttttctat
      121 acacgagtac acagaaaaag cttatgaaga aatggcagaa ctttttgata gttgtgctga
      181 aagagtttta caacttggcg aaaaagctat cacttgccaa aaagttttaa tggaaaatgc
      241 aaaaagtcca aaagttgcaa aagattgctt tactccgctt gaagtcatag aactgatcaa
      301 acaagattat gaatatcttt tagcagaatt taaaaaactc aatgaagaag cagaaaaaga
      361 aagcgatact acaacagctg cttttgcgca agaaaatatc gcaaaatatg aaaaaagtct
      421 ttggatgata ggcgctactt tacaaggtgc ttgcaaaatg taatttaagg ggctttatgc
      481 cccaattata caaactaggt tataatatcc ttttttaaag gataaaattt tgaaagtact
      541 taattttttt tatgaaaacc accctaaatt tgaagtaagt tatgaaagaa aaaatcaaat
      601 ttcaaaacca aatattatca taaaaggccc acgattttgt ggtaaaaaaa cacttatttt
      661 taatttttta tctcaattta aagcaagtga aattttgttt ttagatttat atgatacacg
      721 ctttgaaaaa caaagtttag aaagacttgc tgattttctg aatgaaaatt tacaaattaa
      781 aattctttgc ctttataatt tggattttat ccctaattta gaaaaaatta aaattcccat
      841 catcttaagt acaaatataa aagatttaaa tataaatggg tttgaagagc ttgaactcga
      901 ttattttgat tttgaagaat ttattagtgt aagtaagaaa aatttaccta taaataattt
      961 agtaggtctt tttttacaaa gtggacgcag taaatttgga gaaaaaaaca tacttctaag
     1021 acaaagcttc actcttttag aattagaaat tttaaagtat ttagctttaa atttgggtca
     1081 gcaaatcagt atttctaaga tatttataga actcaaaaaa agattaaaaa cttcaaaaga
     1141 tagtgtttat caagctataa aaaaattaga aaatacttat gtgatctata ctttaaaaca
     1201 tgatgaaaaa aaacttcaaa agatttattt taaagatttt ggcctaagaa ataatctttg
     1261 tatttcaaag gatttttcac atttatttga aaatttagtt ttaagcgagt tgtttaaatt
     1321 taaagaagaa tttttttata acaaatactt taacttttat agccaaatat ctaaaattgc
     1381 ttatatttca agtccaactt tagatattga tttgatcaag ctacgtgcta agaaaatttt
     1441 accaaaggct ttagaacttg gaatttttca tgtgattttt atcactcttt caagcgagga
     1501 taattttttt gagcaagggg ttaaatttga agtcatatct tttgataaat tttcacttgg
     1561 attttaggtg ttgtttgagt ttgtatcgta tttttcaagg ttgtatcgtt tgatgatttt
     1621 tgtaataaga ttgatataat atcccttgcg ttcagaataa gaatctaaag ttttaatagc
     1681 ctctagccct gttatctctt tgccttcgct ttcaaattta gctcttgcat cgcgaaactt
     1741 ttcataagca aaatgacgat ttaaatttaa aacataagag tcaacactat cttgcagact
     1801 atcaaaaatt ttaattttgt gttttttatc tggatgtctt aaatcaggaa ttaaaccttt
     1861 ctcaccccaa gtccattctc caaaaagatt gtttgcttct cttgcgaagc gactggtacc
     1921 tgtagcactt tcaactaaag cttgggctat acccatggat tttggaattt tttgaatacg
     1981 ttttttatat tctgcaaaat cataaagatt ttcaatgcga tatttgtttt ttatcgtgat
     2041 aagtttttca agatttattt ggtttgaagt cctaaagcct gttttgtaag catctttaaa
     2101 aaaggcttcg ataaaggctc tttcttgttc aattttttta aagctttgat caaacatttc
     2161 attcattttt gtaaaaaaaa tttgcctttt ttgatctata tcaagtttgt aatattcctc
     2221 tccaaatcca ctctttagat catcagcggc aaaaagtggg attagaaaaa gactaagaaa
     2281 aattataatt ggcttcaaaa caatacttta cctttccttc aaaaaacaat tcttcatttt
     2341 tatatgcaaa ccctacctct tcaccacttt taggagttat tttaacttta ttttgtactt
     2401 ttttatttaa aaatgccaga taaaaacaag cccccattcc tgtgccacaa gctaaggttt
     2461 catcttcaac tccgcgttca taggtgcgaa cttttaaatg attttcatct aaaattttta
     2521 caaaattaac attggcatta tatttttgtc tcattttttg acaaagcatt gtatcaaatt
     2581 catctaaatt ttgacaaaaa tgtactagat gtggaactcc agtgttgcaa agttgccaag
     2641 tttttcctaa ttcttcaaaa gtattttgca cgctttttat tttgcctaaa gatacttcaa
     2701 ctttatcttg atttaccttt gcttttatta ctcctgcacc agttaaaaaa ctcatgttag
     2761 gatttatttt gttaatatga tgtacaaaat gtgccgcagc ccttgagcca ttgccacaca
     2821 tagcagccct tgagccatcg ttattataaa attcccattc aaagtcgtat ttttcatgag
     2881 gtaatatcac gataaagcca tccgcgccta taccctcata acgattacaa agttctttag
     2941 ctaaagcact tctatcttct tttctatcag catttgttat gacaaaatca ttcccacttg
     3001 cacaatattt ataaaatttc acatttttcc tttagaaatt tcttgtatta ctttaacaca
     3061 ttcttgccta aaatcggcat aagaattagt atttttaatg ataaaatctg cttttttaag
     3121 tttttcttca atatctattt gagaatcaag tcttgctttt gcagcttcta agctaagctt
     3181 atctctttgc atgattcttt taaggcttaa ttctttaggt gtgtaaatta caatgacttt
     3241 gcctaaattt tcataagcac cgctttcaaa aaaaagagga atttctacaa aaaaagcttt
     3301 attttcctta tctagaattt gcatttgttc taaaatttta gctcgaattt taggatgagt
     3361 gaaattttct aagatttttt tagcttcttt gttgttaaaa acaatttctc caaggatttt
     3421 tctatcgatt ttcttttctt ttgtgagtaa attttttaaa ctaaagggag aaaaaatctt
     3481 ttcaagctct aaagcatttt catctaaaat ttcatgagcg attttatctg cactaatgct
     3541 tttaaagcct aaagaattcg ctatttctat aaaggtgctt ttaccacaag caattgaagc
     3601 ggttacaaaa aaagcatttt tcatcttatg ccttattaaa acttttttcg ttaaaatacc
     3661 tttttagttc ttaaaggaaa ataaatgaaa atttcatatg aagatgcagg cgtaagtata
     3721 gataatggaa atgcctttgt agaggctata aaacctttgg ttaaagaaac ttttaatgat
     3781 aatgttgtag gcggaattgg ttcttttgct ggtgctttta gaatgccaag tggttttaaa
     3841 aagcctgtga ttttaggtgc aacagatggg gttggtacca agcttcgctt ggcaattgat
     3901 gctaaaaaat atgatactat agggcaagat ttagtagcaa tgtgtgtgaa tgatttgatt
     3961 tgtaattttg ctacaccttt gtttttccta gattattatg ctacagccaa gctcgaagta
     4021 gaagtagcaa aggctgttgt atcaggcatt gccaagggat gtaagatggc aaattgtgca
     4081 ttaatcggcg gagaaactgc tgaaatgcct ggaatgtatg caaaagatga ttttgatctt
     4141 gcgggttttg cagtgggtat ggctgaagaa gatgagattg atagaagtaa atttgttaaa
     4201 aatggtgata ttttgttggc acttcctagt tcaggacttc attcaaatgg ctattcttta
     4261 gccagaaaag tactttttga aagtttaaaa ttaaaatttg atgacaagat agagggtaaa
     4321 aatttaatcg atattttatt agaacctaca aggatttatg tgcgtgattt tcttacacta
     4381 aagccttata tcagtgctct agctcatatt acagggggtg gtttagtaga aaatttacca
     4441 cgcgttttac ctagtggtat gggtgcaact atacgcaaac atcatcttaa aactcctgaa
     4501 attttttata ctataggaca ggctgtagaa gaaagtgaaa tgtatagaag ctttaacatg
     4561 ggagtgggtt tagtaatggt tgtagatcct tctaatgtaa gtaaggtttt agaaaattca
     4621 gatgccttta ttatcggcga aatttgcatt aatgaaggta ttgttttaga gtgaaaagaa
     4681 tttatttttt aagatatttt aagagtaaat taaaaaaata ataaggaaaa gtgatgaaaa
     4741 atattgtctt tcattcggat ggttttggag atttattagt ttgttttaaa gctttgtatg
     4801 ctataaagca actctatcca gagtataaat tatttttatt aacaaatgga ttaatggaaa
     4861 gtgatttttt agaaaaaatt ccatttattg atgaagtttt gatttataag gatgattttt
     4921 tagaaaaaat tcaaagcaaa aatccagtaa tttttattac cacacgaaga caaggtttat
     4981 attttaaaaa attaaaattt ttaa
//
LOCUS       DARBAC010000107         5000 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.107, whole genome shotgun sequence.
ACCESSION   DARBAC010000107 DARBAC010000000
VERSION     DARBAC010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5000
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.107"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            30..3734
                     /locus_tag="SB799_001495"
     CDS             30..3734
                     /locus_tag="SB799_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002879698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HEG0868723.1"
                     /translation="MKFEAINEKEFLNPYHRKKPILETELNEFIKTLKDYKINLENNL
                     KNNEDSLVANALSKFFENLSFQCEVKSIHKGNSGIDLALKKDGLTQVIIEAKLPHSRE
                     FFSPSKPNCKALHECILYYLRERKALNSSLKHIIITDFYSFFIFKADLFEELFNKNKY
                     FKEAFENFESKNSLFKGNTDEIYKEFEKILNGDSTLKGLFVDLKPILEQDKLSFSKLK
                     PLFKIFSKDCLLGEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESKEEQ
                     GTFYTAINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFKKIP
                     DFDKLSELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISSLSNDLKLFY
                     YKNTVLKDDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVLGNVF
                     EKLNGYKEGSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKDISELRKSLRKEDKK
                     AQKELLNSIKICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILITGRK
                     GEFIEYKRPKTPKDKAHLIQQELFHTKKDIIENNLFGVDINPNSCEITKLRLWIELLK
                     HSFYQSFDDGNYHDLKTLPNIDINIKCGNSLVSYFETGKSLSHYPNIKERMGKYKRIV
                     KDYKEGFYTDKSHINQEIKNLKISFKNFCFADKFKKEMKSFNDKCEKYSKKYGNFLAV
                     DDENLKFFVSANLTLFDFDEKEATKEFANLKKEYDNIFNLESNHPFEWRFEFPEILDD
                     DGNFKGFDLIIGNPPYIKENDNKDLFTNTKKLRTYQGKMDIWYHFVGRGFDILKNNGY
                     LAFIATNNWVTNSGAKKLRNIVLEESQILSLVDFSSFMVFDSASIQTMIMQFQKIKPP
                     KNYEFHFAKITTQTPIYEDVINLLKNEKTQNNEILSINLTPKKFIDKTLNFTKSDYEE
                     LFNKIQKYGKFYLEESEVAQGIVPAIDEAFVIKDKNVFSKNEQCFIKEYYTGLSGKFY
                     SSFTDKYLIYLSNKNYSGNLDDLPNLKQHFQKYKEILKESKIKYKTPNKPYFYLHRER
                     EEKFFKKGEEKIISQVRCIEPIFVYSNENFYGSRALFFIQTCRINLKYLTGVLNSKLI
                     AFWLKHKGKIQGNLFKIDKEPLLNIPVVNINSKNEKLANKLISLVDEILKVKEQDKNA
                     NTQELENKINSLVYKLYNLTEEEIKIIEGR"
     gene            3736..>5000
                     /locus_tag="SB799_001496"
     CDS             3736..>5000
                     /locus_tag="SB799_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEG0868724.1"
                     /translation="MKYKWIVKNAYINFKLNNLYMLINPSHKIYLKKDMCYCFEIYIK
                     YRIFNNCILVCDMLDNWWKLISSTLHLDKSHIKYNYLSNTFIVSDFELGIKLESNLLT
                     KFNFEFYNGLILNQLSITNGLSLKRENYNKSLKFSNCKFNKEFCIARINISKQIVFEN
                     IYFLENVFIEWVNFNENSCLRFFKCNFKKQCNFKYNIFYNEIDFLDIYAKELILEQNI
                     FNKFLYIQNSTINNINLWKNKFKNRCYFMDSVFGNKNNENIKLNFSNAHFEDNAYFNN
                     SEFYSYADFHECEFDDIACFYGVKFYKAPNFSACYFKEPKAVNLINVDIDKLDFKSVE
                     KYIEDNYKDESYKNETKGIQDEKEIFKIQNEYRLRYAKNLKDSFRVIKDVLITQNNTL
                     EAQEWHKLELYAKEKELEIQLSKNKNDNL"
BASE COUNT         2025 a          640 c          725 g         1610 t
ORIGIN      
        1 aaatatttaa aatttattga aagtgcaata tgaaatttga agctataaat gaaaaagaat
       61 ttttaaatcc ctaccaccgc aaaaagccta tcttagaaac agaactaaac gaatttatca
      121 aaactttaaa agactataaa ataaatttag aaaacaatct caaaaacaac gaagattccc
      181 ttgtagcaaa tgctcttagc aaattttttg aaaatttatc tttccaatgc gaagtcaaaa
      241 gcatacacaa aggcaacagc ggtatagact tggccttaaa aaaagatggc cttacccaag
      301 tcatcattga agcaaaattg cctcattcta gagaattttt tagcccaagc aaacctaatt
      361 gcaaggcttt gcatgagtgc attttatact atcttcgcga aagaaaagcg ttaaattcat
      421 cgcttaagca catcatcatc acggattttt atagcttttt tatctttaag gcggatttgt
      481 ttgaagagct ttttaacaaa aacaagtatt ttaaagaagc ttttgaaaat tttgaaagca
      541 aaaactcgct ttttaaaggc aataccgacg aaatttataa agaatttgaa aagattttaa
      601 atggcgatag cactttaaaa gggctttttg tggatttaaa acctatctta gaacaagata
      661 agttaagctt tagtaagctt aagcctttgt ttaaaatttt tagcaaagat tgtttgctag
      721 gtgagtttaa ccccaacgat gcaaattcac tcaacaatgc tttttacaaa gagcttttat
      781 atatcttagg gctttgtgag agcaaacaaa actcaaaact catcatcgca aaaagcgaag
      841 aaagcaaaga agagcaagga actttctaca ccgctataaa ctctaagctt aaagaagaaa
      901 attttgaaac catcttaaaa cttttgatct tatggcttaa tcgcattttg tttttaaagc
      961 ttatagagtc aaatttggtg cgttttaatg atgataaaaa tttgaaattt ttaaatttca
     1021 aaaaaatccc tgattttgac aagcttagcg aacttttctt tgaagtctta gccaaagaaa
     1081 aaagcacgag aaagaaaagc gaatttgcct atctgcctta tctaaattct tctttgtttg
     1141 aaaaacaaag catagaaaac acacttgaaa tttcaagctt aagcaatgac ttaaagcttt
     1201 tttactataa aaacactgtg ctaaaagatg ataaatgtaa agctaaaaaa ggacaagtgg
     1261 ggcttttaga atacttgttt gaatttttgg atagctttga ttttggtagc gatgatgagc
     1321 aaagcgaaat tttaagccaa aaagaactca taagttcaag tgttttagga aatgtgtttg
     1381 aaaaactcaa tggctacaaa gaaggaagtt tttacacgcc aagctttatc acttcttata
     1441 tgtgtaaaga aagtatcaca aaagttgtgc ttgataaatt caacgctcaa tttgatcttg
     1501 atgctaaaga tataagcgaa ctaagaaagt ctttaagaaa agaagataaa aaagcacaaa
     1561 aagagctttt aaactctata aaaatttgcg atcctgcggt gggaagtggg cattttttgg
     1621 tttctgcttt aaatgttatg ttaagcattt atgatgagct aaatcttttt gatgaagaat
     1681 tttatctaga agtgcaaaac gatgaaattc tcatcacggg tagaaaaggc gagtttatag
     1741 agtataaacg cccaaaaaca cctaaagata aagcccatct tatccaacaa gaactttttc
     1801 acaccaaaaa agacatcata gaaaacaacc tttttggagt cgatatcaac cccaactcat
     1861 gtgagatcac caagttaagg ctttggatag agcttttaaa acatagcttt tatcaaagct
     1921 ttgatgatgg gaattatcac gatcttaaaa ccctgccaaa tatcgatata aacataaaat
     1981 gcggaaattc tttggtatct tactttgaaa caggcaaaag cctaagccac taccctaaca
     2041 tcaaagaacg tatgggcaaa tacaaacgca tagtaaaaga ctataaagaa ggcttttaca
     2101 cagataaaag ccacatcaac caagagataa aaaatctcaa aatttctttt aaaaatttct
     2161 gctttgcaga taaatttaaa aaagaaatga aaagctttaa tgataaatgt gaaaaatact
     2221 ctaaaaaata cggaaatttc ttagccgtag atgatgaaaa tttgaaattc tttgttagtg
     2281 cgaatttgac tctttttgac tttgatgaaa aagaagccac aaaagaattt gcaaatctta
     2341 aaaaagaata cgacaatatc ttcaacctag aaagcaatca tccttttgaa tggcgttttg
     2401 aattccctga aattttggac gatgatggaa atttcaaagg ctttgatctc atcatcggca
     2461 atccgcctta tataaaagaa aatgataata aagatctttt taccaataca aaaaagttaa
     2521 gaacttatca aggaaaaatg gatatttggt atcatttcgt agggcgtgga tttgatatac
     2581 ttaagaataa tggatattta gcatttatcg ctacaaataa ttgggttaca aattcagggg
     2641 ctaaaaaact acgcaatata gttttagaag aatctcaaat tttaagcctt gttgatttta
     2701 gttcttttat ggtgtttgat tctgcaagca tacaaactat gataatgcaa tttcaaaaaa
     2761 taaaaccgcc taaaaattac gaatttcatt ttgctaaaat cacaacccaa actccaattt
     2821 atgaagatgt tataaatctt ttaaaaaatg aaaaaaccca aaacaatgaa attttaagca
     2881 taaatttaac tccaaaaaaa tttatagata aaactttaaa tttcacaaaa agcgactatg
     2941 aagaactttt taacaaaatc caaaaatatg gaaaatttta ccttgaagaa agtgaagtgg
     3001 cacaagggat agttccagct atagatgaag cttttgtgat aaaagataaa aatgtttttt
     3061 ccaaaaatga acaatgtttt ataaaagaat attacacagg attgagtgga aaattttatt
     3121 ctagctttac tgataaatat ttgatttatt tgtctaataa aaattattct ggaaatttag
     3181 atgatttacc taatttgaag caacattttc aaaaatataa agaaatactg aaagaatcaa
     3241 aaattaaata taaaactcca aataagccat acttttattt gcatagagaa cgagaagaaa
     3301 aattttttaa aaaaggtgaa gaaaaaatta tttcacaagt tagatgtata gagccaattt
     3361 ttgtatattc taatgaaaat ttttatggtt ctagagcatt gttttttatt cagacttgta
     3421 gaattaattt gaaatattta actggagttt taaattcaaa actcatagct ttttggttaa
     3481 agcacaaggg aaaaatacaa ggaaatctat tcaaaattga taaagagcct ttgctaaata
     3541 tccctgtagt aaatataaat tctaaaaatg aaaaattagc aaacaagctt ataagtttag
     3601 tcgatgaaat tttaaaagtc aaagaacaag acaaaaacgc aaacacccaa gaactagaaa
     3661 acaaaatcaa ttctttggtt tataaactct ataacttaac tgaagaagaa ataaaaatca
     3721 ttgaaggaag atagtatgaa atataaatgg atagttaaaa atgcttatat taacttcaag
     3781 cttaataatt tatatatgct aattaaccct tcacataaaa tctatcttaa aaaagatatg
     3841 tgttattgtt ttgaaattta tataaaatat agaattttta acaattgtat tttagtttgt
     3901 gatatgttgg ataattggtg gaaattgatt tcttcaactc ttcatttaga taaaagtcat
     3961 ataaaatata actatctttc aaatacattt attgtaagtg attttgagct tggaattaaa
     4021 ctagaatcta atttgctaac aaaatttaat tttgaatttt ataatggatt gattctcaat
     4081 caattatcaa ttaccaatgg actatccctt aaaagagaaa actataataa atctttgaaa
     4141 ttttcaaatt gtaaatttaa taaagagttt tgtatcgcta gaattaatat tagcaaacaa
     4201 attgtttttg aaaatatata ctttctcgaa aatgtcttta ttgaatgggt aaattttaat
     4261 gaaaattcat gcctaaggtt ttttaaatgc aattttaaaa agcaatgtaa ttttaaatat
     4321 aatatttttt acaatgaaat tgattttttg gatatttacg ctaaagaatt aattttagaa
     4381 caaaatatat ttaataaatt tttatatatc caaaattcca ccattaataa tattaatttg
     4441 tggaaaaata aatttaaaaa tagatgttat tttatggatt ctgtttttgg aaacaaaaac
     4501 aatgaaaata ttaaattaaa tttttcaaat gctcattttg aagataatgc ttattttaat
     4561 aattctgaat tttatagtta tgctgatttt cacgagtgtg aatttgatga tatagcttgt
     4621 ttttatggag taaagtttta taaggctccg aattttagcg cttgttattt taaagaacca
     4681 aaagctgtaa atttaatcaa tgtcgatata gataagctag attttaaatc agtggagaaa
     4741 tatatagaag ataattataa agatgaaagt tacaaaaacg aaaccaaagg aatacaagat
     4801 gaaaaagaga tttttaaaat tcaaaatgaa tatagattaa gatatgctaa aaatttaaaa
     4861 gattctttca gggttataaa agatgtttta atcactcaaa ataatacctt agaagctcaa
     4921 gaatggcata aattagaact ttatgcgaaa gagaaagaat tggaaattca attaagtaaa
     4981 aataaaaatg acaatttaaa
//
LOCUS       DARBAC010000108         4659 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.108, whole genome shotgun sequence.
ACCESSION   DARBAC010000108 DARBAC010000000
VERSION     DARBAC010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.108"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            103..3056
                     /gene="cas9"
                     /locus_tag="SB799_001497"
                     /pseudo
     CDS             103..3056
                     /gene="cas9"
                     /locus_tag="SB799_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes.;
                     frameshifted; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
     gene            3053..3943
                     /gene="cas1"
                     /locus_tag="SB799_001498"
     CDS             3053..3943
                     /gene="cas1"
                     /locus_tag="SB799_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEG0868725.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFVLKKHNKIGQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            3936..4366
                     /gene="cas2"
                     /locus_tag="SB799_001499"
                     /pseudo
     CDS             3936..4366
                     /gene="cas2"
                     /locus_tag="SB799_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
BASE COUNT         1891 a          559 c          784 g         1425 t
ORIGIN      
        1 aataatatgt atagtttggt tactgaaaag tttatgtttg tataaaaaat gatttttata
       61 ttataattat aaacaaatta taaatatcaa aaaggatcta gtgtggcaag aattttggca
      121 tttgatatag gaataagctc tattggctgg gcatttagcg aaaatgatga gttaaaagat
      181 tgcggagtta ggatttttac aaaggctgaa aatcctaaaa caggagaatc cctagcctta
      241 ccaagacgcc ttgcaagaag tgccagaaaa cgccttgcta gacgcaaagc aaggctaaat
      301 cacttaaaac atttaatcgc aaatgagttt aagttaaatt acgaagatta tcaaagcttt
      361 gatgaaagtt tagctaaggc ttataaaggc tctttaatta gcccttatga gttaagattt
      421 agagctttaa acgagctttt aagtaagcaa gattttgcaa gagtgatttt acatattgca
      481 aaaaggcgtg gctatgatga tattaaaaat aatggtgatg aagaaaagag cgagatttta
      541 aaagctatca agcaaaatga agaaaaacta gtaaattatc aaagtgtggg agagtatctt
      601 tataaagagt attttcaaaa attcaaagaa aattccaaag aatttataaa tgttagaaat
      661 aaaaaagaaa gttatgaacg ctgcataacg caaagttttt taaaagatga attaaagctt
      721 atttttcaaa aacaaagaga atttggcttt tctttttcaa agaaatttga agaagaagtg
      781 cttagtgtag cattttataa aagggcttta aaagattttt ctcatttagt gggaaattgt
      841 agttttttta ctgatgaaaa aagagcgcca aaaaattcgc ctttagcttt tatgtttgta
      901 gcactcacaa gaattatcaa tattttaaac aatcttaaaa atactgaagg aattttatat
      961 acaaaagatg atttaaacgc ccttttaaat gaagttttaa aaaacggcac tctaacttat
     1021 aaacaaacaa aaaagctttt gggcttaagc gatgattatg aatttaaagg agaaaaagga
     1081 acttatttta ttgagtttaa aaaatacaaa gaatttataa aagccctagg tgagcataat
     1141 ttaagccaag atgatttaaa tgaaatagca aaagatatca ctcttataaa agatgagatt
     1201 aaacttaaaa aggctttagc aaaatacgat ttaaatcaaa atcaaattga tagcttaagc
     1261 aaattggaat ttaaagacca tttaaatata agttttaaag ccttaaaact tatcactcct
     1321 ttaatgcttg aaggtaaaaa atacgatgaa gcttgcaatg agcttaattt aaaagtagca
     1381 atcaatgaag ataaaaaaga ctttttaccc gcatttaatg aaacttatta caaagatgaa
     1441 gtaactaatc ctgtggtttt aagggcgatt aaagaatata gaaaatctta aatgccttac
     1501 ttaaaaaata cggtaaagtg cataaaataa acattgaatt agcaagagaa gtaggtaaaa
     1561 atcacagcca aagagctaaa atagaaaaag agcaaaacga aaactacaag gccaaaaaag
     1621 acgccgaaat tgaatgtgaa aaactaggct taaaaataaa tagcaaaaat attttaaaat
     1681 taagattatt taaagaacaa aaagaatttt gtgcttatag tggagaaaag attaaactta
     1741 gtgatttgca agatgaaaaa atgcttgaaa ttgaccatat ttacccttat tctagaagtt
     1801 ttgatgattc ttatatgaat aaagttttag tttttaccaa gcaaaatcaa gaaaagctta
     1861 ataaaacccc ctttgaagcc tttggcaatg atagtacaaa atggcagaaa attgaagttt
     1921 tggcaaaaaa tttacctgaa aaaaagcaaa aaagaatttt agataaaaat tacaaagaca
     1981 aagagcaaaa agactttaaa gatagaaatc taaacgatac tcgctacatc gcaaggcttg
     2041 ttttaaacta cactaaagat tatttagatt ttttaccttt aagcgatgat gaaaatacaa
     2101 aattaaacga tacgcaaaaa ggctcaaaag tgcatgtaga agcaaaaagc ggtatgctaa
     2161 catcggcttt aaggcacact tggggcttta gcgctaagga tagaaacaac catcttcatc
     2221 acgccatcga tgcagcaatt attgcttatg caaacaattc tatcgtaaag gctttttcag
     2281 attttaaaaa agagcaagaa agcaacagtg tagaacttta tgcaaaaaaa attagtgaat
     2341 tagattataa aaacaaaagg aagttttttg agccttttag tggttttagg caaaaggttt
     2401 tagataaaat tgatgaaatt tttgtctcaa aacctgagag aaaaaagcca agtggagctt
     2461 tacatgaaga aacatttaga aaagaagaag aattctatca atcatacggc ggaaaagaag
     2521 gagttttaaa agccctagag cttggtaaaa tccgcaaagt aaatggtaaa attgttaaaa
     2581 atggcgatat gtttagagtg gatattttta aacacaaaaa gacaaataaa ttttatgctg
     2641 tgccaattta tactatggat tttgctttaa aagtattacc aaataaagct gtagcgcgaa
     2701 gtaaaaaagg tgagataaaa gactggattt taatggatga aaattatgag ttttgctttt
     2761 ctttatacaa agatagtttg attttaattc aaactaaaga tatgcaagag ccagaacttg
     2821 tttattttaa tgcttttaca agctctactg ttagtttgat tgtttcaaaa cacgataata
     2881 aatttgaaac gctaagcaaa aatcaaaaaa tattgtttaa aaatgcaaat gaaaaagaag
     2941 taatcgcaaa aagcatagga attcaaaatc taaaagtatt tgaaaaatac atagtttcag
     3001 cacttggaga agtgacaaag gctgagttta gacaaagaga agattttaaa aaatgagtta
     3061 cgatgaagct tttaaaacac tgcttattag ctctaatgcc aagctaaatt tagagctaaa
     3121 tcatcttgtg attaagcaag atgaaaatat agccaaattg tttttaaagg atataaacat
     3181 catcgtttta gaaagcttac aagtaagcct tagttccgca ctttttaacg cttttgcaag
     3241 gcataaaatt atcttattaa cctgcgatga aactcatagt ataaatggtg tttttactcc
     3301 ttttttaggg cattttcaaa gtgcaaaaat cgcaaaagag caaatgaatg taagtgctca
     3361 aaaaaaggct attttatggc aaaaaatcat taaaaacaaa atcctaaatc aagcctttgt
     3421 tttgaaaaaa cacaataaaa tagggcaaag caatgagctt ataaatttgg ctaaaaaagt
     3481 aagcttaaat gatagtaaaa atatcgaagc tgttgcagcg gcgctttatt ttaaaacttt
     3541 gtttggcgtt tctttttcaa gagatgagct ttgctttgaa aattctgctt taaattatgg
     3601 ctatgcaatc attagggctt gtattattag agcagtttgt ataagtgggc ttttgccttg
     3661 gcttggcata aagcacgata atatttataa ttcttttgca ctttgtgatg atttgataga
     3721 agtgtttagg gctagtgttg atgattgtgt tttaaagctt aagggtgaaa gtgagttttt
     3781 aagcaaagat gacaaaagag cgttgattgg caatttacaa agcaaaatca attttgatgg
     3841 gcaaaattat cctttaaaca gagcgataaa tcattatgtg gcgaatttta aaaatgcttt
     3901 attgtatgaa gatgagctaa agatagtgaa atttgatgat tgaagataaa tttatgcgcg
     3961 tgcttttgat gtttgatgta cctactaaaa gtaaaaaaga gcaaaaacta gcaagtaaat
     4021 ttagaaacaa tcttataaaa ttaggttatt ttatgctgca atttagcgtt tatatgcgta
     4081 tttgcaaggg tttaagttct gcaaaaagtt ctattaaaat gtaaaaaaga ttttgccacc
     4141 ttatggaaat gtaagggctt taatcatcac tgaaaagcaa tttgataaaa tggagctttt
     4201 gcttggtggc atagttttta atgaaaaagt taataacgaa actaatttaa cgctttttga
     4261 tatagatagt catggagaat ttaaatacaa aaattcaaat aatgaagaaa tacaactaaa
     4321 caaaaaacaa gaaaaatatc atcagcaaaa tttatttgaa ttttaaaagc ggttttaggg
     4381 gattgtaacc ccgcagagtc ccgcaaactc tttattttag tcccttttta aatttcttat
     4441 tgagattata gcataatttt tgctattttt catgaaaaaa ccccgaaatt ttcattatct
     4501 ggtaaatatc tattttacca taaagaaatt taaaaaggga ctaaaacaaa atcaaatttt
     4561 ttatatacct tgcaaatatt ttaccataaa gaaatttaaa aagggactaa aacttattaa
     4621 aaacaaaaac ttgataactc ataattttac cataaagaa
//
LOCUS       DARBAC010000109         4644 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.109, whole genome shotgun sequence.
ACCESSION   DARBAC010000109 DARBAC010000000
VERSION     DARBAC010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4644
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.109"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            33..1121
                     /gene="nusA"
                     /locus_tag="SB799_001500"
     CDS             33..1121
                     /gene="nusA"
                     /locus_tag="SB799_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEG0868726.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVAKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            complement(1137..2324)
                     /locus_tag="SB799_001501"
     CDS             complement(1137..2324)
                     /locus_tag="SB799_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868727.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLNMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCMLILIGISFLVRLSIPDFHQKTQSRFFIMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INDKNLFYMYLGQGFGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIDLSLELITGLLGMIFIFAAFYWKWFYK
                     KYL"
     gene            2399..3445
                     /locus_tag="SB799_001502"
     CDS             2399..3445
                     /locus_tag="SB799_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HEG0868728.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYRRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIDKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLQRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            3445..>4644
                     /locus_tag="SB799_001503"
     CDS             3445..>4644
                     /locus_tag="SB799_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEG0868729.1"
                     /translation="MQYLESRGVKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKTLQKLKINALGELASKNSNFDYLAKNLLNAQIFKCKEFQSPNDGDEKSIET
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSK
                     NIKDEILVRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYESLSKRLSIAFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNISFA"
BASE COUNT         1809 a          590 c          798 g         1447 t
ORIGIN      
        1 ttaaatttcc cacaaaaaag gttttataaa atatggaaaa gatagcagat attatcgaat
       61 ctattgctaa tgaaaaaaat ttaaacttag agaatgtaag agaaaaggta gctaccgctt
      121 taatcaatac tgcaaaaaga atttatggac aagaatatga gttttttgtg gatcctaaaa
      181 atttaaatct ttatcaaaaa attaccatag tagcagataa tgacgagaga ttgcaaaata
      241 aaagtgagag ttttatcgcg ttaagtaagg caaaatcaga agctccagat gttgaaatag
      301 gagatgaatt aacctatgaa tgttctttgg aaaatttagg aagaactgcg gtaaatacct
      361 tgcataaaga acttgaatat catatacaaa aattattaga acaaactatt tttgaaaaat
      421 ataaaaacaa agtagggcaa atggtttttg gtacagttgt tagagtggat aatgaagaaa
      481 atacttttat tgaaatagat gaattaagag cttttttacc gagaaaaaat cgcattaaag
      541 gggaaaagtt taaaataggt gatgtggcaa aagctgtgat acgccgtgtt tatacagata
      601 agggtattaa aatcgagctt agtcgtacaa gtcctaaatt tttagaatgt ttacttgaag
      661 ctgaggttcc agaaatcaaa gatggttatg tcaatattat aggatgtgct agaattccag
      721 gtgaaagagc aaaaatcatt cttcaggcca atggagcaaa tatcgatcct gtaggtgcta
      781 cagtaggtgt taaaggtgta agaattaatg cagtaagcaa agagcttcat aatgaaaata
      841 ttgattgtat agaatttaca aatgagagtg aaattttaat ttctcgtgcc ttggctcctg
      901 ctattgtaaa ttctgtaaaa attgaagata aaaaagctat tgtaagttta aatagcgaac
      961 aaaaaagcaa agctatagga aaaaatggta ttaatattcg ccttgcttct atgttaagtg
     1021 gttatgaaat agagctcaat gaattaagct catcgcagct aaataatgcc atcagtaatg
     1081 aagaagcaat gaaaaatctt caagatttat ttaaaattta aaatatttgt gaattttcac
     1141 aaatattttt tataaaacca cttccaataa aatgccgcaa agataaaaat catacccaat
     1201 aagcctgtaa tcagttctaa actcaggtct atttcaaaca aaaagcccat aagcattgaa
     1261 ataatagcac taaaactaag ataaatcata tctgtataag cgatcaccct accatgatat
     1321 tctttgtcgg catttttttg tatcatagtg taggtataag cccaaagcgc tgaggtaaaa
     1381 aaacctgcac caattaatcc taaaaaagaa atataaaaat taaattgagt taaagcccaa
     1441 agtataatac caaaaccttg accaagatac atgtaaaata aatttttatc attgataaat
     1501 ttgcttaaaa ccataggtcc tatagccaaa gaacaagcac gtaccgcatt taaaaaccct
     1561 attactaaag cagcagataa aacttcttta tattgatgtt gcgctaaaag cgtaactaag
     1621 gtttcataag cagttaaacc tataaaagcg tgaagcaaga taagatgaaa aattatttta
     1681 ttatttaaaa catagaaaaa tccttctttt atcatgataa aaaagcgact ttgtgttttt
     1741 tgatgaaaat caggaatgct taatcttact aaaaaagaaa tgcctatgag tataagcatg
     1801 cagtcaaata aaaaagcggt tttaactcct agaaaataaa taaaaattcc cgcacttgcc
     1861 atacctgctg tataagaaat cgcccaaatg acactgtgca tttcattagc gagtttaagt
     1921 tcttgagggg ttaaaatttt cgccaataaa ctcatttcag cttgaaaata aatcgaagca
     1981 acacaaagtc ttatgaaaat taaaataaat aaaagccaaa gcatactaag acttgtgaca
     2041 aaaataagac aaaaaataga aattaattct atactaatca tattgagtaa aagtttttta
     2101 ggtttatttt tctctactat gacgccatta ataggagcaa gcaaaactcc aggtaaaaaa
     2161 gcaagcatag cacttgtagc tgttgcccaa gtaggagcat taagctcaac caaaagggta
     2221 aaaactcctg tttgagaaaa ccatgctcca aaatatacta taaactgaac cgaagctaat
     2281 attctgatat ttttattatt ttttaatagt tcaatgtaat tcataagcga aactatagca
     2341 taatttatat tttaaatgct ataattattt taatttatgc aaaaaacaag gaaaaatttt
     2401 gaaaagactg gataaaaaag aagctttaga tttattacat catgcaagtt taacagagct
     2461 tggagaaatg gcttatagaa gaaaattaga acttcatcct gaaaaaatca ctacttttgt
     2521 tgtagataga aatattaact atactaatgt ttgttgtatt gattgttctt tttgtgcttt
     2581 ttatcgtcat cataaagaag atgatgctta tattttaagt tttgaagaaa tagataaaaa
     2641 gatagaggag cttgaagcta ttgggggtac acaaattctt tttcaaggcg gggtgcatcc
     2701 aaaattaaaa atagaatggt atgaagaatt agtttcttgg ataaaagaac attatccaaa
     2761 tatcactgta catggttttt cagcggttga aatcgcttat attgcaaaag catctaaaat
     2821 ttcaattact gaagtgcttc aaagattaca agctaagggt ttattttcta taccaggagc
     2881 aggtgctgag gtgctaagcg atagggtgcg tgatatcatt gcacccaata aatgtgatac
     2941 agctacttgg ttagaagtac atcgccaagc tcataaaatc ggtatgaaaa gtacagctac
     3001 tatgatgttt ggaacggttg aaaatgatga agaaatcatc gatcattttg aacatttaag
     3061 aaaattacaa gatgaaacag gtggttttag agcttttatt ttatggagtt ttcaaagtga
     3121 taatactgct ttaatccaaa aacatccaga gattatgaaa caaagttcta acaagtattt
     3181 aagactttta gctttagcaa gactttattt agataatttt aaaaatttac aaagttcttg
     3241 ggtaactcaa ggctcgctta taggtcaact tgctttaaaa tttggggcta atgatttagg
     3301 ctcaaccatg atggaagaaa atgtagtaag tgctgcagga gcaagttata gaatgaatca
     3361 agatgagatg ataaggctga ttagaagttt aggcgaaaat ccagctaaac gcaataccgc
     3421 ttatgaaatt ttagaaaggt tttaatgcag tatttagaga gtaggggtgt taaaatccct
     3481 tttatttttg aaaaaaattc tgattttcct attgttgttt taaagcttgt ttttagaaat
     3541 tgcgctagaa gttatgatga aatagcaggt ttggctaaaa tgttttcacg cattttaaat
     3601 gaaggcgtgg atgataaatt ttttaaggat ttagaattta gagcgataaa tttagaggca
     3661 agtagtggtt ttgaaagttt ggaaatcaat ctttcttgct tgaaagaaaa ttttgatttt
     3721 gctttaaaga gtttagaaaa attgctttta aaaccaagaa tagaagaaaa aactttgcaa
     3781 aaattaaaaa tcaatgcctt aggtgagctc gcgagtaaaa atagtaattt tgattattta
     3841 gcaaaaaatt tactcaatgc tcaaattttt aaatgtaaag aatttcaaag tccaaatgat
     3901 ggagatgaaa aaagtataga aactttgtct ttaaaagatt tgcaaaattt ttataaaaat
     3961 tttatccatc ttagtgattt ggttgtgatt ttaggaggag atttagaaga aaaacaagcc
     4021 aaggaagatc ttttaaaact cttatcaaaa cttcaaatag gtaaaaaaaa tactccaaaa
     4081 aaatatgagt taagcaaaaa catcaaagat gaaattttgg tacgcccaga aagtgaacaa
     4141 gcttatattt attttgctac gccttttttt gctgatttta aagataagga tttatatctt
     4201 gcaaaaattg ctttatttgt tctagggcaa ggaggatttg gttcaaggat tatggaagaa
     4261 attcgcgtta aaagaggtct tgcatactca gcttatgcta tgcttgatat gaatatgtct
     4321 ttttctagag tttttggata tttacaaact aaaaatgaaa gcgctaaaga agctaagaaa
     4381 atcgtaaaag agctctttga agattttata aaaaatggca tgactcaaaa cgaacttgat
     4441 caagctaaaa attttctcat aggatcaact cctttgcgtt atgaaagctt aagtaagcgt
     4501 ttatctatag cctttaatga attttatcaa ggtttaaatt tgggatacta taaagaagaa
     4561 ttaaaactta tggaaaaggt taagcttgaa accataaatg cttatattaa aaaacatcaa
     4621 gaacttttaa atataagttt tgca
//
LOCUS       DARBAC010000110         4467 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.110, whole genome shotgun sequence.
ACCESSION   DARBAC010000110 DARBAC010000000
VERSION     DARBAC010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.110"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..410)
                     /locus_tag="SB799_001504"
     CDS             complement(<1..410)
                     /locus_tag="SB799_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEG0868730.1"
                     /translation="MADAHENEQRKGFWEFLQALKKGKISTPQLILMGDIFDLLIGEI
                     SATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFFKRVKIFNLQEQPIKLNLHTS
                     KGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRN"
     gene            complement(447..932)
                     /gene="greA"
                     /locus_tag="SB799_001505"
     CDS             complement(447..932)
                     /gene="greA"
                     /locus_tag="SB799_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEG0868731.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRHAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGDLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            complement(944..2038)
                     /locus_tag="SB799_001506"
     CDS             complement(944..2038)
                     /locus_tag="SB799_001506"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEG0868732.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGKFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKQAIKELINLSFTQKIDGILCIDSPAFNI
                     PFAKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFSKSTYV
                     GHPLLDEIKEFKNQEDINHILSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGE
                     KILCIPPFNLEKLEIYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     TYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILSEI"
     gene            complement(2135..2887)
                     /gene="peb3"
                     /locus_tag="SB799_001507"
     CDS             complement(2135..2887)
                     /gene="peb3"
                     /locus_tag="SB799_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HEG0868733.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVNRTFNVV
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            complement(3029..4399)
                     /locus_tag="SB799_001508"
     CDS             complement(3029..4399)
                     /locus_tag="SB799_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEG0868734.1"
                     /translation="MFDFFKPKAKAIKFPKEEILPRYYKMRTWSLSGVFIGYMGYYLV
                     RNNITLSTPFIQNQLDLSKSDIGTITGSMLIAYGISKGAMSVISDKADPKKYMALGLI
                     LCALVNVLLGFSNSFYAYVGFVIALGVFQGMGVGPSFITLANWYPKKERGIYTAVWNI
                     SHNIGGGIVAPIVSLSGFALAALLGVSMADFNETYWHMNHFYVPAACGVIISLYVLYA
                     VKGSPKNEGLIDITEINEMRGIKTEEIKAVETPNLSSFEIFYRYVLKNKNAWYVAWMD
                     TFVYMVRFGLISWLPIYLLETKGFNKEQMGIAFWLFEWAAIPSTLLAGYISDKIFKGY
                     RMPPAIGAMVIIFFMIIGYFTSNNLYMVIFFAAMAGCLVYIPQFLASVQTMEVVPAFA
                     VGSCVGLRGFMSYVVGASLGTKAIGWAVDYYGSWNAGLIMLLSACILCILCSTLCHFS
                     AKKKYQ"
BASE COUNT         1513 a          814 c          609 g         1531 t
ORIGIN      
        1 tgatttctta atgttttaag agtaaattgt aaaagaggtg gtaaaaaaat atctccgtga
       61 gctaatttta taaaagcatt atttaaaaca agattattac ctttacttgt atgcaaatta
      121 agctttatgg gctgctcttg taagttaaaa atttttaccc ttttaaaaaa acaagaaaga
      181 ttaaaatcat gattgccttc taagtagata atttcaattt ttaaggccaa ttcttctaaa
      241 agttctatgt aaggtttagc aaattcatgt gtagcagaga tttcgcctat aagcaaatcg
      301 aaaatatcac ccataagtat gagttgaggg gtggaaattt tacctttctt taaggcttgt
      361 aaaaattccc aaaatccctt tctttgttca ttttcatgag catccgcgat taaaatcgct
      421 ccattttgta gtaaaatttt ttatccttaa aatttcaaag gctcataatt tatagaaagg
      481 atttcaaatt cactctcacc ttttggcaaa cgcactttaa aatcatctcc ttcttttttc
      541 ccaagcatag cttttgctat tggagatgcg atggaaatat aacccttatc taaatctcct
      601 tcgcaaattc ctactaaagt atatttactt tctttttctg tatccaaatc catgatcaca
      661 acacttgaac caaatttcac actatcatgt tcatagcttg aaggatcgat cacttgagct
      721 cttgctagca agtcactaag ctctgcaata cgactttcta tcaaagcttg tttttctctt
      781 gcagcatggt attccgcatt ttctttcaaa tccccatgac tccttgctgt atcgatttct
      841 attacaacgg catggcgttg attgtctttt aaatctttta attctgcggc taatttatca
      901 tagccaaatt gactcattgg ttctttttgc atgatttatc cttttatatt tcgcttagga
      961 tttttgctaa atttttagca cttccaaatt gtaaatattc ttttaaaaaa tcaactttag
     1021 caaaaaatgc cttataatca tatttattat aagcttcata taaatttaaa acattgactt
     1081 tatcttgtaa aaattcagga tttaaagctt cttttccagc gaaatcacaa aaaatatttg
     1141 caagtcctat gtgttttaat tttacaaaaa gttttgcgat aaaaatatcg atagcctttg
     1201 ctttgtaagt aagaacaaaa ggagttccca ctaaagctgc ttctaaagta gctgttccac
     1261 tacaaataaa ggcaaaatcg gcttttttaa gcacttttgg agtgttgctt tctatcttaa
     1321 attcgctaat atcaccataa atttctaatt tttcaagatt aaacgggggg atacaaagaa
     1381 ttttttcacc cttaaatttt tgagaaagtt ctttaaaaat aggcattaaa cgcctaattt
     1441 cactacgcct tgaacctggt aaaaaggcta tagttttttc atcatctttt tttgaaagta
     1501 tatgattaat atcttcttga tttttaaatt cttttatctc atctaaaagc ggatggccta
     1561 cataagtact tttgctaaaa aattgattat caaagggcaa aatagaagct aaaatatcaa
     1621 aatgactttc tatgataggt atgcgacctt ttttccatgc ccaaacttga ggtaaaatat
     1681 aataaatgcg tggaatttta ctgcctgctt tttttaaagc cttggcaaaa ggtatgttaa
     1741 aagcgggtga atctatacat aaaatcccat ctattttttg agtaaaactt aaatttataa
     1801 gctcttttat agcttgtttt gctttaaaaa tcaaaggtaa aacttctata aaacccatag
     1861 cactaaactc atgtgagcta taaagtggct tagaatttaa atcaaattct ttgcataaac
     1921 tctcatcata aatcccatga agttcaaatt tgccaaagtc ttttttataa gcttttaaaa
     1981 cttcttttaa atgcaaattt gctgaaggct ctaaggcgca aactaaaaag gttttcaaaa
     2041 aatttcctta tcaatatttt aaacatttta tcttattttg gcttaattaa aagaagttat
     2101 ggaagaatac acgctaaaaa gcgtgtatga agatttattc tctccagccg tattttttaa
     2161 aaatttcttt agcttcctta gaacttaaat aagcaataaa atcttgtgtt tctttgctcg
     2221 caccttcttt agctaccaca ttaaaagttc tattaacaac caaatctttt tctatagcta
     2281 cggcagttcc tatgtcagga ttgctttttg accagtcaat ccaagtgatc caagcatcgg
     2341 cttgatcttg tgcgaaaagc tttcttgcac ttccactatt tggaacaaaa gctacgatat
     2401 tgtttctaaa attttgtatg gtttttatat cttgagttct acctatcata tcttcccaaa
     2461 ctcccgttcc agaagtattg ctctttccag caccttcagg tacaacgatt cttacttttt
     2521 tattagccaa atcttttaaa cctttgattt ttaaaggatt gcctttttga gtaagtatga
     2581 tagcttctct aaaatacaaa ggcttgattt tactcacatt aaaatctttt ccaaaatcac
     2641 ttgctatagc taaagccgat tgatctgaag cgccaaataa aatatctgca tcttttttag
     2701 ccttttcaaa ccaagtcgct tgagggccaa aatttacatt tactttaacg cctgtttttt
     2761 cgctatattt gtttgctata tcttttaagg ccgtgtgtgg gccacctggt ccgtaaagat
     2821 ttacatctgc atttgccata ctaaaagcta aggcacatgc accaaataaa gtaataattt
     2881 ttttcatagt atttcctttt atgataaatt tttattgatt gaaggtgaga ttttagaaat
     2941 tatatgttaa taaatagtta taatgtaaca aaaatattat taaaatctaa cttttgcttg
     3001 gtatttttgc aagcaaaagt taaaattgtt attgatactt ctttttagca ctaaaatgac
     3061 ataaagtaga acaaagtata caaagaatac aagcactaag gagcatgata agaccagcat
     3121 tccaactacc atagtaatcc acagcccagc ctatagcttt tgttccaagt gaagcaccga
     3181 ctacataact cataaagcca cgaagtccta cgcaagatcc tactgcaaaa gcaggaacga
     3241 cttccatagt ttgcacactt gctaaaaatt gtggtatata gactaaacac cccgccatag
     3301 ctgcaaagaa aataaccata taaagattat ttgaagtaaa atatccaata atcataaaga
     3361 aaataatcac catagcacct atagcaggag gcattctata gcctttaaaa attttatctg
     3421 aaatatatcc tgcaagtaaa gtagaaggta tggcagccca ttcaaaaagc caaaaggcaa
     3481 tacccatttg ttctttatta aagccttttg tttctagcaa gtaaatagga agccaagaaa
     3541 taagcccaaa acgcaccata taaacaaaag tatccatcca agccacatac caagcatttt
     3601 tgtttttaag cacataacga taaaaaattt caaaactgct taaatttgga gtttctacag
     3661 ctttgatttc ttctgtttta atccctcgca tttcattgat ttcagtaata tcaatcaaac
     3721 cttcattttt aggacttcct ttaactgcat aaagcacata aagactaatg ataactccac
     3781 aagcagcagg aacataaaaa tgattcatgt gccaatatgt ttcattaaaa tccgccatac
     3841 tcacacccaa taatgctgcc aaagcaaaac ctgaaagcga aactatagga gcaactatcc
     3901 cgcctcctat attatgtgag atattccaaa cggccgtgta aattccccgc tcttttttag
     3961 gataccagtt tgcaagagtg ataaaagaag gacctacccc cataccttga aaaaccccaa
     4021 gcgcgataac aaaacctaca taagcgtaaa aagaatttga aaaaccaagt aaaacattta
     4081 caagagcaca taaaataaga cctaaagcca tgtatttttt aggatcagct ttgtcgctta
     4141 taacgctcat tgcacccttg ctaatcccgt aagctataag cattgagcct gtgattgttc
     4201 cgatgtctga tttactgaga tcaagttgat tttgtataaa tggagttgaa agagtgatat
     4261 tatttcgcac aagataatat cccatatatc ctataaaaac cccacttaaa ctccaagttc
     4321 tcattttgta atatctaggt aaaatttcct ctttaggaaa tttaatagct tttgccttag
     4381 gtttgaaaaa atcaaacata tttaaaccat ccttactaac tttatatttt tatagtttaa
     4441 ataatgttaa tcgatataaa ataaaaa
//
LOCUS       DARBAC010000111         4435 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.111, whole genome shotgun sequence.
ACCESSION   DARBAC010000111 DARBAC010000000
VERSION     DARBAC010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4435
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.111"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(103..852)
                     /gene="mreC"
                     /locus_tag="SB799_001509"
     CDS             complement(103..852)
                     /gene="mreC"
                     /locus_tag="SB799_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEG0868735.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIK
                     DYLGEKISEHFNQANQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINIGDEILTSGLDNIFFSDIPVGIVN
                     RIDDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(842..1882)
                     /locus_tag="SB799_001510"
     CDS             complement(842..1882)
                     /locus_tag="SB799_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEG0868736.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(1894..3117)
                     /gene="clpX"
                     /locus_tag="SB799_001511"
     CDS             complement(1894..3117)
                     /gene="clpX"
                     /locus_tag="SB799_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEG0868737.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(3110..3901)
                     /gene="lpxA"
                     /locus_tag="SB799_001512"
     CDS             complement(3110..3901)
                     /gene="lpxA"
                     /locus_tag="SB799_001512"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEG0868738.1"
                     /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVGKDTKIGNDVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(3901..4341)
                     /gene="fabZ"
                     /locus_tag="SB799_001513"
     CDS             complement(3901..4341)
                     /gene="fabZ"
                     /locus_tag="SB799_001513"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEG0868739.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
BASE COUNT         1444 a          921 c          491 g         1579 t
ORIGIN      
        1 ttataaaaat ttatttgata atttaacaaa atttttagca ttaaacaaag ttataataat
       61 tagcaaaaat atagaaaatt tttaaaaagt ctaatccttg acttataaat tatctactac
      121 atataaataa gcaggaatac taatcttaac ataaggcttt acttctacac tttgatacat
      181 atcttcatca tcaattctat tcacaatccc aacaggtata tctgaaaaga aaatattatc
      241 aagtccactt gttaaaattt catctccgat attaattttt gcccattttg gaataaattt
      301 aaccacaatc ctgccatctt caccttggat taaacctgga gctttggatt ttcctatata
      361 aacagaaaaa acacactgat catcaccttg taaaagagcc attgctctac catttttatt
      421 aatagctata cctgcggtat atccttgata tatcaaacca cgatttttac caacgggaat
      481 tttactccaa tctaaccata attttttata atcattcaat tgaacataag aaataactct
      541 agttaaagaa acttgaggta aatattttgt agaattttga tcctctaaaa tacgatttaa
      601 ttgatttgca aaactagtta cctttacagc aatatcttct aattctttat ttctagcttt
      661 tagttgctga atttgatttg cttgattaaa gtgttctgaa attttttctc ccaaataatc
      721 tttaatatta taaaaattac ctataacaaa atcattaaca cggagaacat tttgcttaat
      781 aagtcctcca taataaaaag atataaaaac caaaaaggct aagacaagaa cataaaaaat
      841 cttattcttc attggttaat tgttgtaata atgaaatttc ctctaaagct ttacctgttc
      901 cttttgctac agctaaaagc ggttcatctg cgatataaac tggcaaacgt acaatttcac
      961 ttaagtattt atcaagacca cgaatcaatg ctccgccacc tgttaaaact acaccatttt
     1021 ctactatatc acttgctaaa tcaggcggca tcatttcaag aaccattttt aaagcatcag
     1081 caatttcttt taaatactca cgcatcgctt ctcttacatc ttcgcttgta agttcaatac
     1141 gacttaaaag tccacttact tgatcgcgtc cttttaccac catagaaagc tcttttggaa
     1201 gttgtattgc tgaacctata gtgattttaa tctcttcgcc tgttctttca cctatgataa
     1261 gattgtattt ttcttttaca taattaacta tactcatatc aagcttatct ccagccgtac
     1321 gaatagactt tgaaatcaca agtccaccca aagaaatcac tccaatctca gtagttccac
     1381 cccctatatc tactaccaaa tttcctttag gctcttgtat aggtaaactt gcaccaatag
     1441 ctgctgccat aggctcttca atcaaaaata cctctcttgc acctgcgctt aaagcacttt
     1501 ctcttaccgc ttttctttct acttgagtta aaccataagg aacagaaatg ataattctag
     1561 gacgtaaaaa actttttcta cggtgtgttt tttctataaa atagcggatc attttttcag
     1621 tcatatcaaa atctgcaatc acgccatctt tcataggacg aatagcttcg atattgcctg
     1681 gagtttttcc caccatatct ttagcttctt tacctacggc taaaattttt gctttggaac
     1741 catacctttc tctttcaact gccacaacag aaggctcatt tatcactata cccttatctt
     1801 ttaccaaaac tagggtatta gctgttccta aatcaatccc catatcacta gaaaaaaatc
     1861 ctataagttg atctaatatc atttctatcc tttttaactt atttttcttt ttattaataa
     1921 tgcctttgca ttgtctttaa caacttcttt ggttattaca atatcatagt ttttatactc
     1981 tggtaattca aacattaaat ctaccatcat ttcttctata atacttctaa gccccctagc
     2041 ccctgttttt ctctccaatg caagttgtgc gatagctctt agggcatctt cttcaaattt
     2101 taaattcact ccatcaatag caaaaagctt ttgatattgc ttaataatgg catttttagg
     2161 ctcagttaaa attcttacca tatcttcttc attaagctca tttaaagatg caatcacatg
     2221 caaacgacct ataagctcag gaatcaaacc aaaatgcacc aaatcatcag gttcaatttt
     2281 ctcaagtaaa gctttatttt cttcttttgc atcatcaaaa aagcccacaa ctttatcgcc
     2341 aagttttctt tttaagatag tttccaaacc atcaaaagct ccaccacaaa caaataaaat
     2401 atttgaagtg tcaatttgta taaactcttg atttggatgt tttcttcccc cttttggtgg
     2461 aatatttacc aaacttcctt cgataatctt aagtaaagct tgttgcacgc cctctccact
     2521 tacatcacga gtaatagaac gattttcact cattctagca attttatcaa tctcatcaat
     2581 aaaaactata cctttttgag ctctttgcac atctccatct gcagcttgta aaagacgtgt
     2641 taaaatattt tccacatcct cacctacata tcctgcttca gttaaagaag ttgcatcaca
     2701 aattgctata ggtacatcta aaaatttagc taaagtttgt gccaataaag tttttccact
     2761 tcctgttggc ccaacaagta aaatatttga cttaaaaagc tctgtatcat catcttgaag
     2821 ttcggcttta aaaagtcttt tataatgatt gtatactcca acactaaaaa cttttttagc
     2881 tctatcttgt cctatgacat aacgatctag ataagctttt aattcttttg gagtgatatc
     2941 tttaaattct gtattatggc tttgtttagg ttctttaaat tctttttctt ctccataaat
     3001 aatactataa gcaccttcaa cgcaatattc acaaataaaa gcatcatcat tttcatttgc
     3061 taaaattctt ctttgtggat tctccacttc attgcaaaaa ctacattttc taggcattat
     3121 ttttacccct atagacagga attccgcgct ttgtttctaa tataaaatgg cacatttttt
     3181 taacattttc actttcttga ttttcaagca aatttttagc attttctttt aagtctcctt
     3241 gtctaaataa agttttaaaa gctctgctaa gtctatctac ttcatcttta tcaaaacgac
     3301 gacgaatacc tactaaattt aaacttctaa tacttgcacg atttccttct gctaaacaaa
     3361 acggtactat atcctgagaa agtgcacttg ctcctgctat catacaaccc tcacctactt
     3421 tgacaaattg atgaataggt gtaagcccgc ctacaaccgt aaaatctcca agctctacat
     3481 gtcctgctaa agttgcatta ttagctaaaa taatattatt acctaaaaga caatcatgag
     3541 caatatgaca ataagccata ataaaagcat tatcgcctat acgagtaaaa ccatctcctt
     3601 tagctgtacc tgaatttatc gttgcaaatt ctctaatagt tgcgtttttt cctataacaa
     3661 caccgctttt ttgttcttct ttataagata tatcttgagg aatatcacct actatggcat
     3721 aagaaaacac acgagaatga tcgcctatag ttgtatctga aagaattcga gcaccttgtt
     3781 tgatgacaac atcattacct attttagtat ctttacctac ataagcataa gcttctatta
     3841 caacatcgtc accaagttgt gcaccctctt caatcaccgc acttggatga atttttttca
     3901 ttatttatcc actatcatag ctttaagctc ggcctctgca actaaatttc catctacaaa
     3961 agcttgccct ttaaaaatcc acatattacc acgattttta accacgctca tttcataatc
     4021 aagtctatct ccaggacgca caggatttct aaattttgct ccatctatgc ctgtgaaata
     4081 aactacttta ctttttggat ccactttatc ttccatactt tcaaaagcta aaactccacc
     4141 tgtttgagcc ataccttcta aaatcaaaac tccaggataa ataggatgcc ctggaaaatg
     4201 tcccataaaa acatggtcac ttatactgat gtttttatat cctcgaacca cttctttaac
     4261 ttttaattct gtaattttat ctactagtaa aaaaggataa cggtgtggta agatttcttg
     4321 aatttgcatt acatctatca ttattaaatt aaccttgaaa acaattaaaa attttattat
     4381 ataaaaaaat cattaaaaat tacattaaca aaaaaagttt ttcttaataa atttc
//
LOCUS       DARBAC010000112         4418 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.112, whole genome shotgun sequence.
ACCESSION   DARBAC010000112 DARBAC010000000
VERSION     DARBAC010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.112"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..2712)
                     /locus_tag="SB799_001514"
     CDS             complement(<1..2712)
                     /locus_tag="SB799_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HEG0868740.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDVKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNLPKIPNPSKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDSLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQKI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCTLKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIVKRSEESVNGNYPSYFKGGFLNIYSQERGFLE
                     SKEQILSVKKESIQALQKFEKISPQEVQSEEKLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQMLTQRCKSKFRHFLDESDFEKLFKRIEILLKNTQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVRTYKIAISEILKKDKV"
     gene            complement(2709..>4418)
                     /locus_tag="SB799_001515"
     CDS             complement(2709..>4418)
                     /locus_tag="SB799_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEG0868741.1"
                     /translation="KQEILKEEIFKTKNSKIKLKSFELRALQCAFVMDEISHFVRKGL
                     KPENIVVITPDESFCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFVY
                     KNQEDYFEDTQMIFDYHNTLLHSLKLDFIEFKNYFDEKCDFEYFEKLLALFLENEKQE
                     LVYLIRKELYFIKDLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGL
                     CFDGVILVDFNEEFIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALE
                     VSICFVENEEKSKSRFLDELDFDFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPIL
                     KHNPFEFALSFSRFNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIY
                     YKNYANNDFDIKVFANLLDKEYQKYNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAH
                     TELELNNILKLGTDSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDE
                     NANVGFYDLNSMQILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEHCPYKLIYKK
                     ELK"
BASE COUNT         1530 a          746 c          446 g         1696 t
ORIGIN      
        1 cactttatct tttttcaaaa tttcactaat ggcgatctta taagttctta cttgctcttt
       61 atgtttatct tgcatagcaa gacctgtttt ataatcaatt atgaaagctt cttcatcttt
      121 taaggcaagc aagtctaatt gtttaatttc tccattaaaa ctcaaagctt gttcttttaa
      181 aagctttcca tcaccaatca aattttgaaa ttgagtattt ttaagtaaaa tttcaattct
      241 tttaaaaagc ttttcaaaat cactctcatc caaaaaatgt ctaaatttgc tcttgcatct
      301 ttgagtaagc atttgaaaat tttcaccctt aggaagtttt aaattttgca taaaaaagtg
      361 aaaagcattt ccaaaatata gctctttact atcaagcttt tcttcacttt gaacttcttg
      421 tgggctaatt ttttcaaatt tttgtaaagc ttgaatactt tcttttttaa cacttaaaat
      481 ttgctctttg ctttctaaaa aacctctctc ttgagaatat atatttaaaa atcccccctt
      541 aaaataactt ggataatttc catttacact ttcttcgctt ctttttacga ttatcaaact
      601 ttccttagct cttgtaaaag ccacataaag tttattgata tcatcttcat aatttgctct
      661 tgtaatattt tctttaaaaa gggtataaat aggctcttta gtaagctctc gaattttatc
      721 cttaatatgg agttgccaac cttgattgat atcatattca agcatgatat cttcattgtt
      781 tgaattgttt ttagataaac tatcaagcaa aatcacatga tcaaattcca aacccttaga
      841 tttatgcaca ctcataatac taattcccat attttgttcg cttactattt tcaaagtaca
      901 aggctcaaat aaaagcttta aaaaattctc cttagtttta gcatattcga taaattgtat
      961 taaagcgata tcatttaaat caagttttaa ttcctttatt aaaaaaagta cattttccat
     1021 agcatttttt gaaaaatcaa gggtgatttt tctcggctca aaacctaaaa gttcttttaa
     1081 aaataccaag taaaactcat caccaaaaat acaatattta gcatattcta aaacaagcct
     1141 tacgcttgct ttattttcaa gtaaaacatt actttgagta aatgcaggaa ttttttgctc
     1201 tcttaaaaaa tccaaaacca tatctgcatc gctatttttc caacacaaaa tacaaatatc
     1261 atcataagaa atatttttag atcttaaaaa attaatttgc tcaaataaag tttctaaagt
     1321 cttttccttg atttcttggg cttggttttt aaccttttgt tctttagatt ccacaatacg
     1381 cacaaaaccg ccttttttac tttctaaggc aaattgctct ttataatctt tgattttttc
     1441 tttaaaagtt tcattaacaa aatcaaccaa aagctcttta gaacgataat tagtatttaa
     1501 actatcactt ttaatttgac taaattcttg ttttaacaaa tcaaataatt ctttttttcc
     1561 tttacgaaag cgataaatac tttgtttttt atctcctaca taaaaaaaag tgcgattttt
     1621 cttaacccct tctcctgaaa caagctcagc gatcaaaggg cgtaaaattt gatattggat
     1681 cacgcttgta tcttgaaatt catcaataag caaatgcgaa ataaaaccat ctaaacgaaa
     1741 ataaatcata tccttaaatt cactggttat taactcataa acttttttac tcacatcttg
     1801 gaaatttaag gtatttttat ctttatgaaa tatattttta gcttcactat aatgatttaa
     1861 aagattcatt aaattagcaa ttttataatt ttcaagctct atggcatagg tatttaaagc
     1921 atttataagc tccattcttt ttgcactaaa atgcaagtta gtactttcta aatcttgtaa
     1981 atattttgta ctttcaaatt ttgtcataaa acttgattgc ataaacacgg ataaatctaa
     2041 aacttcactt ttgaaattgt cacacaaatt tttataattt tttacatgag taagacccaa
     2101 acaataactt cttaactcac tataggcttt attgatataa gctttagatg gatttggaat
     2161 tttaggaaga ttttgaaaat aagcattctc ataaaatttt tcaagctcgt taaaaaaatt
     2221 ttctttctca tcaactaaat taatataata agccaaatct tttaattcat cttttttaag
     2281 aagttttaaa aaaatctctc ttacatcaag tctctcttca ctcattgtaa aatcactact
     2341 taagcccaaa tttaaagcaa aaacacgcaa aatttttccg aaaaaagcat caaaagtact
     2401 gatttttaac tctgttctta aaaattcttc ttttttaaca tctcttaaag aaataagctc
     2461 ttctttatct ttacctaaaa gcttgcaaag ttcattgcat tcactggttt tattttcttt
     2521 ttctaaattt aaaaaagtct caataattct tttttgcatt tcattagcag cttttttagt
     2581 aaaagttaaa gctaaaattt cattaatcct agctcctttt aaaataagtg ctacaaaacg
     2641 cacactcaag gcaaaggttt ttccgcttcc cgcactcgct tctaatgcca aaaaaggctc
     2701 aaattgactc attttaattc ctttttataa atgagtttat aaggacaatg ctcatcttgt
     2761 tcattttcaa actctatttc ttccttgctc ataagaacca aatctttaag tctttctctt
     2821 agctcatcta aacttttagc tttttgatgc aatatttgca tactatttaa atcataaaaa
     2881 cccacgtttg cattttcatc atataaggct tggtaaaaag caagttgata agaattactt
     2941 ggtacttttc cacttttata atcaatgatc aaattgcctt cttttgaact atcgatacga
     3001 tctatagtgc ccttaagttt tatactatct gttccgagct ttaaaatatt atttaactca
     3061 agctctgtat gtgcaacata aaagcctttt gaaaaatgct ctttttcatt tttagcaaat
     3121 tgtataaatt ttaatttaaa tacttcaaga tcaagttcgc taatattgta tttttgatat
     3181 tctttatcca ataaatttgc aaaaactttt atatcaaaat cattatttgc ataattttta
     3241 taataaattt caagcatttt atggatgaaa tttccttgat ttttcgcttt gctttcctcg
     3301 cttaaaaccc taggttctgc taaatttaaa atataacgat aataataagt tcttttttga
     3361 ttttccaata aattaaaacg actaaaagaa agcgcaaact cgaaaggatt atgctttaaa
     3421 ataggagctt ttataggagt tagattaggt tttatgcctt catagtctaa ttttaaagca
     3481 ttaagataag ctttttgatg gatatgagtt tcataaaaaa agtcaaaatc aagttcatct
     3541 aaaaaacgtg atttgctttt ttcttcattt tccacaaagc aaatacttac ttctaaagca
     3601 ttcttcatca agctttcata ataaaatctt tgtaaatttt ctcttctatc atagctaatc
     3661 aatcctgctt ttttacgcac ttcattgttt aaaaaaagtt cattaacact tcttttagga
     3721 ataaattctt cattaaaatc aaccaaaatt accccatcaa aacaaagccc acgactttct
     3781 aaaagtccca ttaccgtaac cttacctccg cctacatcac taagggaaag ttgtgaaatt
     3841 tgcatgaaaa aaagatggat caactcttta agagttaaag actgattttt caataaatct
     3901 ttaataaaat aaagttcttt tcgtatcaaa taaacaagct cttgcttttc attttctaaa
     3961 aataaagcaa gtaatttttc aaaatattca aaatcacatt tctcatcaaa ataattttta
     4021 aactctataa aatcaagctt taaagaatgt aaaagcgtat tgtgataatc aaaaatcatc
     4081 tgcgtatctt caaaataatc ctcttgattt ttataaacaa aagaagcact actagcactt
     4141 tcataaagtg cttgaaattt ttgataaaat aaactttctt taatactaat cccacttgca
     4201 aaattaagca tattgtcttt atcaaaaagc cttaaaaact cacaaaaact ttcatctgga
     4261 gttataacta caatattttc aggctttaaa cctttgcgta caaaatgtga aatttcatcc
     4321 ataacaaagg cgcattgtaa agcccttaat tcaaaagatt tgagtttaat ttttgaattt
     4381 tttgttttaa aaatttcttc ttttaaaatc tcttgttt
//
LOCUS       DARBAC010000113         4397 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.113, whole genome shotgun sequence.
ACCESSION   DARBAC010000113 DARBAC010000000
VERSION     DARBAC010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4397
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.113"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..162
                     /locus_tag="SB799_001516"
     CDS             <1..162
                     /locus_tag="SB799_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEG0868742.1"
                     /translation="KILLKFSKKNINEIANECAFSSVAWFIERFKEKYEQTPKQYQKT
                     KNLYFLSKN"
     gene            225..1076
                     /locus_tag="SB799_001517"
     CDS             225..1076
                     /locus_tag="SB799_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868743.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKNPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFIAGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKI
                     FKVELNK"
     gene            1084..2247
                     /locus_tag="SB799_001518"
     CDS             1084..2247
                     /locus_tag="SB799_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HEG0868744.1"
                     /translation="MASFKKIFWINVIIVIIVAFNLRAPITAVGPIIDIIKDKYYLNS
                     TVAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLA
                     MGCGIAIANVLLPSFIKEKFPKKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGA
                     MFFWAIFSFIALVVYYPQAKNGRFFRIKKKAHKKINLFTNLTTWKITLFMGFQSFLAY
                     SLFFWYVQIVVEKGFDKEFSTSMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIAGLC
                     SMYVIAFGILFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALA
                     QGFGYLIAAQGQWIIGFLHDKFENFSFAILMLVFVGILVNIFGYLSYKSQIIK"
     gene            complement(2218..3246)
                     /gene="murG"
                     /locus_tag="SB799_001519"
     CDS             complement(2218..3246)
                     /gene="murG"
                     /locus_tag="SB799_001519"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEG0868745.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKENFFLSSKGVVNQSKFGKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGAQFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQIFMQNSINLDEFFKSILKLNLENISTRLQNITQKNGADMLIQKAL
                     FDNLTFIR"
     gene            complement(3243..>4397)
                     /gene="ftsW"
                     /locus_tag="SB799_001520"
     CDS             complement(3243..>4397)
                     /gene="ftsW"
                     /locus_tag="SB799_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEG0868746.1"
                     /translation="DKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQLFF
                     GISGILIMFFISRLDPDKALSKKIILAILIISFIFIIILPFLPSVLATASGGAKRWIR
                     LGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGYIYI
                     TQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIASWW
                     GNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLGFLS
                     EVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIALLLL
                     FSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
BASE COUNT         1516 a          596 c          707 g         1578 t
ORIGIN      
        1 aagattttac ttaaattttc taaaaaaaat attaatgaaa tagctaatga gtgcgctttt
       61 tcttcggtag cttggtttat tgaaagattt aaagagaaat atgagcaaac tcctaagcaa
      121 tatcaaaaga caaaaaactt gtatttttta tcaaaaaact agcacatttt ttttatccaa
      181 ataaatataa ttcaatgaaa atatttttaa ataaaggaga aaatatgaaa aaatatgttt
      241 taagtttagc gcttcttgga agtttgcttg gtgcaagtga attaaaatat caagaatttg
      301 atggttttaa aaaccctgaa agtatttttg tagataaaaa ctatgtttat gtatctaatg
      361 taggagaaaa acttgaacct ttggcgaaag ataatgatgg atttatttct aaacttgata
      421 aaaatggcaa agtgctagaa tataaatttt taacccatct taatgcacca aaaggtatga
      481 tggagattgg aaaaactctt tatgtggtag atatcgatgt tttacgcggt tttgatctta
      541 aaactaaaaa agaaattttt aatttaccta ttaaaggtgc aatcttttta aatgacatag
      601 aaaaattaga cgacaatacg cttttggtta gcgatactgg cacaggactt attttaaagg
      661 ttgatttaaa aactaagcaa tatgatgaat tattaaaact tgatttagca aaatttggcg
      721 gtccaaatgg gttatatcta gatagaaaaa aacataagct ttttatagct ggttatcatc
      781 ctgatggtgt aagtggcggt gttgtaatgg cttatgattt aaatacaaaa gaactcagta
      841 taattaaaaa tgaaaaagaa tcttatgatg gaatagttcc ttataaagat ggtttattgg
      901 taagttcttg gggaaataat ctaaatggat atatttataa tttagataat gttaaatctg
      961 taaaacttga acttcctttg atgaaaggtc ctgcagatat atttattgaa ggtaatattt
     1021 tatggattcc taagatggca gaaggtaaaa tattcaaagt agaacttaat aaataaggct
     1081 tttatggctt cttttaaaaa gatattttgg attaatgtta ttattgttat tattgtagct
     1141 tttaatctta gagccccaat tactgcagtg gggcctatta ttgatattat taaagataag
     1201 tattatttaa actcaaccgt agcgggcata cttacaagtc ttcctttgat agcttttgga
     1261 agtatttctt ttattgtggg gtatttttct cctattcgtg ctattgtttt tggaattttt
     1321 ttaatttttt taggcgaaat tattcgttct tattttggtg tatatggctt atttttagga
     1381 atgttagcaa tgggctgtgg tattgcaatt gcaaatgttt tacttcctag ttttattaaa
     1441 gaaaaatttc caaaaaaaat ggcaagtata atgggaattt atagtcttgt tttgagtatt
     1501 tcttcgatta tgggtattgc tttagctata cctttgctta gtgtatttga tttagctgga
     1561 gctatgtttt tctgggctat tttttctttt atagctttag tagtttacta tcctcaagct
     1621 aaaaatggta gattttttcg cattaagaaa aaagctcata aaaaaatcaa tctttttaca
     1681 aatttaacaa cttggaaaat tactcttttt atgggatttc aaagtttttt agcttattct
     1741 ttgttttttt ggtatgttca aattgttgta gaaaaaggat ttgataaaga attttctaca
     1801 agtatggttt tatttgctca acttgttgca gctccagtgt ctctttttgg ccctttactt
     1861 ttaggaaaat taagacaaaa tttacatact ttttacatag caggtttgtg cagtatgtat
     1921 gtgatcgctt ttggtatact ctttattttt gatagcaaaa tttctattat tattagtgct
     1981 tttatcatgg gttttccatg gggtggagtt tttggcattg cgttgctttt tattgcacaa
     2041 aaaagctcta atgctcaaat agcagcgaga ctttctgctt tagctcaggg ttttggatat
     2101 ttaattgcag cacaaggaca atggattata ggttttttgc atgataaatt tgaaaatttt
     2161 tcatttgcta ttttgatgtt agtttttgtt ggaattttag taaatatctt tggatattta
     2221 tcttataaaa gtcaaattat caaataaagc tttttggatt agcatatctg cgccattttt
     2281 ttgggttata ttttgcaatc ttgtagaaat attttctaga tttagtttta atattgactt
     2341 aaaaaattca tcaagattaa tagagttttg cataaaaatt tgacataaag cttgatcttg
     2401 taaaaattta gcattaaagt attgatgatt tttagctgca taaggataag gtataaaaat
     2461 agtgggtaaa gtattagcgc aaagttcaaa aagagtactt gcacctgctc ttgatatagc
     2521 tagatctgca tttttcattt tttcttccaa atttaaacta aaatcaaaaa tatcagcttg
     2581 gatatttaag ctttgataat gttttttgca cttttcaaaa tcattttttc cacattgatg
     2641 gatgattttg atattttgtt cttgaagttt tggtgctaaa tttaaagcta gttcgttgat
     2701 aaattgagct ccttgtgatc ctcctaggaa aataatattt tttaattctt tgcgaatcct
     2761 agcattatca aaaaatttat ctgctacggg ataagggcta atttcttttt caaaggcgct
     2821 aaaaaatttt gtagcgaaag gttttaaaag catatttaaa gagccgcttt ttgaattttg
     2881 ttcatgtata aaaagaggca aatgtgagaa taaagctgca aaagatgcag gagctgcact
     2941 atatccacct acactaaaaa cggcttggat gtggtatttt ttaaaaattt ctctacaatc
     3001 tttggagagt tttaaggtgt ggagtaaaga actgattttg ccaaatttgc tttgattaac
     3061 cactccttta gagcttaaaa aaaaattttc cttaaagcgt acttcatttt caaaccaagc
     3121 tttatcttga ccattttgac tgcctatgta tacacattct atattttttt taatcgcact
     3181 ttctaataag caacgcacta tggccaaatg tcctccagtt ccaccacctg ttaaagctat
     3241 tgtcataatt taaccttttt tgaaatcatt aatacatatc ctatgcctat acaaattgcc
     3301 cacattgaac ttcctccata gcttaaaagt ggaaccgcta caccttttag tggagtaaga
     3361 gaaataatac caaaagcatt cataaagaaa gaaaaaagta aaagtaaagc tatacctgaa
     3421 cagaaaataa aatcttgttt agcttcacat cttcctgcaa ttctaaaaat tcttaaaatc
     3481 atccaaagat aaatatagca aataactcca agacctaaga gtcctatttc ttcagtaatt
     3541 cctgaaagaa caaagtcagt atgcacttca cttaaaaagc ctaatttaaa agttccaagt
     3601 cctaggcctt cgccaaacat tcctccatgg gctatagcat ttaaagagtg tgaaatttga
     3661 taaggctcgc tattgctgct tactcttaaa gcatttgcca gccaatcagg aagcataggt
     3721 aaaaaagcat cttgtatatt cccccaccaa gaagcgattc tttgaattct tctttggttg
     3781 ctaaaaatta ccattatacc tatcatcata atgattaaag ttccaaaagc aaaaagcctt
     3841 ttactagctc ctgcaaaaaa agctaaagct agaatcaaaa agaaagaaat tacgctttgt
     3901 cctaaatcgt tttgagtgat ataaatatat cctataacta tagaagctaa gatacaataa
     3961 ggcagaagaa ttaaagcctc gtgtctgata gcttttttgc tatcatcaat acgccttgta
     4021 tagctccatg ctaaaaaata aatcaatcct attttaaaaa attccacagg agagatagag
     4081 agtgggccta agcgtatcca gcgtttagct cctccgctag ctgttgctaa tacagaaggt
     4141 aaaaatggca aaatgatgat aaagataaaa gaaataatca aaatagctaa aataattttt
     4201 ttagaaagtg ctttatcagg atccaatcga gaaataaaaa acattataag tatgccacta
     4261 attccaaaaa aaagctgacg aataaaaaaa tgaaactcgc tatagtcaag aaaaagaaca
     4321 gtaaaagctg taagagagta tgaaaatact attcctatgg tgattaaaat acaacttaaa
     4381 taaaataatc ttttatc
//
LOCUS       DARBAC010000114         4276 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.114, whole genome shotgun sequence.
ACCESSION   DARBAC010000114 DARBAC010000000
VERSION     DARBAC010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.114"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            63..377
                     /locus_tag="SB799_001521"
     CDS             63..377
                     /locus_tag="SB799_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HEG0868747.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
     gene            380..1075
                     /locus_tag="SB799_001522"
     CDS             380..1075
                     /locus_tag="SB799_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868748.1"
                     /translation="MLFGFDDKREFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     LYAKNTKSLKMIFGNFLHNIMHVSFGKIQNINIKLNTYAFYFQKRKSLIFNTKISKNI
                     DLLRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGDLIIIDKKFAILPLCK
                     EINAHNLKIENEIHGLLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            1075..1566
                     /gene="fldA"
                     /locus_tag="SB799_001523"
     CDS             1075..1566
                     /gene="fldA"
                     /locus_tag="SB799_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HEG0868749.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKP
                     YFA"
     gene            complement(1611..2141)
                     /locus_tag="SB799_001524"
     CDS             complement(1611..2141)
                     /locus_tag="SB799_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868750.1"
                     /translation="MSKITLILSFFIALFMSACTNATFIQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLRTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLENKIINQIVSFFYF"
     gene            complement(2147..2857)
                     /locus_tag="SB799_001525"
     CDS             complement(2147..2857)
                     /locus_tag="SB799_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEG0868751.1"
                     /translation="MKKLSLILACSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDTELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            complement(2906..>4276)
                     /locus_tag="SB799_001526"
     CDS             complement(2906..>4276)
                     /locus_tag="SB799_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SelB C-terminal domain-containing protein"
                     /protein_id="HEG0868752.1"
                     /translation="TSIKNNQGIEELKNYLYTIENKENNEELIFHYYIDRVFSLKGIG
                     TVVTGSLNEGSITLNEKIICLDTQKELIVKNIQNHDTNLEQIKACNRVALSLNCDYKE
                     LKKGYLLSKKGYFKAFKECDALVKAKNLQNSKMIFCVGSRQIECKINILKKLENDEFF
                     VHFSFDKNVFLSFDEAFILLQNNRVIGGGKVLNPLSEPLKKEQKNKFLMFLKNKDFKA
                     AFSFLKDAHKYGFGLLSSYQRFKLSHQKALKLAKELNQVFVDEKNLNVYHLQSLEEIK
                     NFIKFILEKNPYAMLSAHSLALRITWASENFCELGLKKMSNLLDFQNGIYFKKGIDFE
                     KLQEKNNNQMYEILKKQGIKPEAPYNLYDFLELDRKSGDNILKKLTQKGLVVRLSHNL
                     FIEKQALEKLMQECLNLLKNQSLDVQSMKEYFNLSRKYAIAYLEYLDKFPQVNKEAEK
                     RFLTNI"
BASE COUNT         1446 a          541 c          618 g         1671 t
ORIGIN      
        1 agttttttta tattataata ataattatca aaatatattt taaaaatcac aaaggagaat
       61 ttatgtcagt tttggttatt ggtgcagatg aaatcactcc tattagagct gttttacatg
      121 atttaggtgc taaaaaaata gaacactggg atgcacgtaa tgaaaataga gttaatcgca
      181 agccgattcc ttgtgataca gaatgtatag taatgttaac aagcttttta aatcataata
      241 ctatgaaaaa aatcaaaaat gaagctaaaa agcgcaaaat tccattagta tgtgcaaaaa
      301 gaagtgtaag ttgtgtgtat tgtgaatatt gtaaaatttt taatcttaat aaagaatttt
      361 cttgctataa aggttaaaga tgttatttgg atttgatgat aagcgagaat ttataccgca
      421 aatttatcgc tatttaaaca atcaagagct tatgttgact tttttaactc aatataatgc
      481 gagcgttgat agtgctctaa aaattcctct tttatatgca aaaaatacca agagtttaaa
      541 aatgatattt ggaaattttt tgcataatat aatgcatgtt tcatttggta agattcaaaa
      601 tataaatatc aagcttaata catacgcttt ttactttcaa aaaagaaaaa gcttgatttt
      661 taatactaaa atatctaaga atatcgatct tttaagactt ttaagaattt atctttatgg
      721 catttgtttt gatgcacaaa ttttatttag ctcttatgtt tatgataagg tttcttttca
      781 aaataatgga aaaaatatag atcaagatgg tgatcttatt ataatagata agaaatttgc
      841 aattttacca ctttgtaaag agattaatgc acataattta aaaattgaaa atgaaattca
      901 tggattattg aatttaataa aagaaaacaa ttttgaaaaa ttttatattg tttgtccgcg
      961 taacaaaaat ttcacacatt ttattgaaat aaaacatttt ttgtgtgatt taaacaaaac
     1021 tatgttaaaa ttagttccgt ataaaatatc aaatcaaatt ataaggagaa aataatgtca
     1081 gtagcagtaa tctatggtag tgctatggga aatacagaag gagcggctaa tacaattgct
     1141 tcaaaacttg gaattagcga tgtttttaat atctcagata ttgatgcggc taaaatgaat
     1201 tcttacgata aattaatttg tggaacttca acttggggaa gtggtgattt acaagatgat
     1261 tgggatggtt ttgatttttc agggcttagt cttggtggaa aaactgtagc tgtatttggt
     1321 atgggtgata gtgaaagtta ttctgacact ttttgtggcg gcatgggtaa attagctcaa
     1381 aatttaaaag atgcaggtgc aaatttggta ggagaagttt caactgatgg ttatacattt
     1441 gaagcaagcg atgcggttgt agatggtaaa tttgttggac ttgctcttga caatgataat
     1501 caagaagatc aaactgaatc aagaattgat gcttgggtag aacaaatcaa accttatttt
     1561 gcttaataat tcttaaaatc aagagttttt atactcttga ttgtcttttc ttaaaaataa
     1621 aaaaaactca ctatttgatt tataatttta ttttctaaag ataattgaca gcgttcttta
     1681 tttccaagat aagctgttct tgcaagaaga cttgtttttt gagaattgtg atttttagag
     1741 ttgatttgta aattaacttg catagtatag tagttttcta ccatccattc tccatcactt
     1801 tccaaaggat caaaatcata aaaaaatctt gctgaagttg tgattttttg agcataagaa
     1861 tgctttttca tatctacaag attgattaaa atttcataat ctgcattctc ttttacttct
     1921 tttaagccta aatttttaag ttttaaagcc aaatctctat ccaaagtagt tcgaagttgg
     1981 ctaggatttt gaaaggaaat tttaaaactt tgttgttttt gtgatctgat aaaaatgcct
     2041 tcattgcttg tttgaataaa gctttgtatg aaagttgcat tggtgcaagc actcataaag
     2101 agtgctataa aaaagcttaa aattaaagta attttagaca ttaggtttat ttaataatag
     2161 ttggagtagc gctaagacct aatgagcgat atttttcata taaggaaaaa acttctttta
     2221 attctgtatc gcttactttt ggataatttt tgatatttgc atcatagtat ttgtttaaaa
     2281 ttgcgatttt ttctttgtca ttttttgctt tttttgcttc tttgtagatt agagcggatt
     2341 tttcaaaagc agattttcca tgtactggag ttaaaatata attaacttga tagtttttaa
     2401 gttcatcatc aatttgagct aaatgttctc tacaataagg acattcagga tctgaaaaaa
     2461 cataaatcgc aggtttattt ttatctccca aagctattac catggtttct ttttgtgcta
     2521 cagctttagc attttttgta aaattttctc ttgcttcttg aaattttttc atttcatatt
     2581 cttgagcata agaaattccc gttttcaagt cgataagatc aggggtaata agactatctt
     2641 ttgtaaaaag aatgttttct tgtttttgcc catttaattc aacgcttaca ataacacttt
     2701 caaaacccgt attaccaacc ttttgacgat ttgatacact aacggtagca tttggaaatt
     2761 gtgctttaat gctttttgaa taaaaatcac taatttctga attacttgca gcaaacaaag
     2821 atgctgaaca ggcaagaatt aaacttaatt ttttcatagt ttataaatcc tttaaataaa
     2881 ttatgtttaa ttctataatg attttctaaa tgtttgttaa aaatcttttt tcagcttctt
     2941 tgtttacttg aggaaatttg tctaagtatt ctaaataagc aatagcatat tttcttgaaa
     3001 gattgaaata ttctttcata ctttgcacat caagactttg attttttaat aaatttaaac
     3061 attcttgcat aagtttttca agagcttgtt tttctataaa aagattgtgt gaaagtctta
     3121 caaccaagcc tttttgggta agttttttga gtatattatc tccgcttttt ctgtcaagtt
     3181 ctaaaaaatc ataaagatta taaggagctt cgggtttaat accttgtttt tttaaaattt
     3241 catacatttg gttattgttt ttttcttgaa gtttttcaaa atctatacct tttttaaaat
     3301 aaattccatt ttgaaaatcc aataaatttg acattttttt aagcccaagt tcgcaaaaat
     3361 tttcacttgc ccaagtaatc cttaaagcta aagaatgtgc tgaaagcatg gcataaggat
     3421 ttttttcaag tatgaatttg atgaaatttt taatttcttc tagactttgt aaatgatata
     3481 cattaagatt tttttcatcg acaaatactt gatttaattc tttcgctaat ttcaatgctt
     3541 tttgatgaga gagtttaaat ctctgatagc ttgaaagcaa accaaagccg tatttatgtg
     3601 cgtcttttaa gaaagaaaaa gctgctttaa aatctttatt tttcaaaaac attaaaaatt
     3661 tatttttttg ttcttttttt aaaggttcgc ttaaaggatt taaaacctta ccaccgccta
     3721 taacacgatt gttttgtaat aaaataaaag cctcatcaaa acttaaaaat acatttttat
     3781 caaaactaaa atgcacaaaa aattcatcat tttctagttt ttttaatata tttattttgc
     3841 attctatttg tcttgaaccc acgcaaaaaa tcattttgct attttgtaaa ttttttgctt
     3901 taactaaagc atcgcattct ttaaaggctt taaaataacc ttttttactt agcaaataac
     3961 cttttttcaa ctctttataa tcacaattta aacttaaagc cacacggtta caagctttga
     4021 tttgctctaa attagtatcg tgattttgta tatttttaac aatgagttct ttttgagtgt
     4081 ctaaacagat gattttttca tttaaagtga tacttccttc attcaggcta cctgtgacga
     4141 cagttcctat gccttttaga gaaaaaactc tatcgatata ataatgaaaa atcagttctt
     4201 cattgttttc tttgttttct atggtataaa gataattttt taattcttct atgccttgat
     4261 tattttttat actggt
//
LOCUS       DARBAC010000115         4179 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.115, whole genome shotgun sequence.
ACCESSION   DARBAC010000115 DARBAC010000000
VERSION     DARBAC010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4179
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.115"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..483)
                     /locus_tag="SB799_001527"
     CDS             complement(<1..483)
                     /locus_tag="SB799_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEG0868753.1"
                     /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLGQLCFKEKPSKLIFIG
                     TCGLYDKGKILEIYKSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     H"
     gene            563..1363
                     /gene="rsmA"
                     /locus_tag="SB799_001528"
     CDS             563..1363
                     /gene="rsmA"
                     /locus_tag="SB799_001528"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEG0868754.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMVQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KMLFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDSYLKIYDKLKDEYGRKQRDK"
     gene            1332..3326
                     /locus_tag="SB799_001529"
     CDS             1332..3326
                     /locus_tag="SB799_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEG0868755.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKEISENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFSRTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKTTKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            3362..4123
                     /locus_tag="SB799_001530"
     CDS             3362..4123
                     /locus_tag="SB799_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEG0868756.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
BASE COUNT         1598 a          625 c          711 g         1245 t
ORIGIN      
        1 atgatttttt ataaaatctt cgtgagcgtt ttcattgcaa aaatttgttg cacacaaaat
       61 acactctgca tcaatattta aatttttagc tacacttaaa acagaaaagg cttccatatt
      121 ttctgcaaaa aaacctaatt tcgaaaattc ttttgctgct tttgaatttt gacaaatata
      181 atttgaagaa ttgatcttga ttgtttcacg agaaacattt tctttttcta aacaaatttc
      241 atattttgca ggagtataaa aagcatgtga aattttagaa aattctacat taaaagcgtg
      301 tgaacttttg taaatttcta aaattttacc cttatcgtaa agcccacaag ttcctataaa
      361 tataagtttt gatggttttt ctttgaagca aagttgaccc aaatgaaaag ctgattcaac
      421 caaacctata cctatagctt ttgcaaaaga aaaattttca tttccacccg cacaaacaat
      481 cattttgatc cttatgaaat tttacaaaaa taattctacc taaaaagact taattaagaa
      541 tttttagata aaattatttc ttatggttaa agcaaaaaaa caatacggac aaaatttttt
      601 aatcgataaa agcgtattag caaaaatcat ccaagccata cccaaagaga tgaacaatat
      661 tattgagatt gggcctggct taggtgattt aacgcaagaa cttttaaaaa tttctcaagt
      721 aaaagcttat gaaatcgata atgatctcat acctatttta aaaaagaaat ttcaaaaaga
      781 acttgaatgt ggaaaattta acttgatcca tcaagacgca agcgaagctt ttaatcctag
      841 tcttgatgaa aaaccatatt ttttggttgc aaatttgcct tattatgttg caagtcacat
      901 tatattaaaa gctttagaag ataaaaattg tctagggctt attgtaatgg tgcaaagaga
      961 aatggctgaa aaattctgcg ctaaagaagg aaatagtgag ttttcttcct taggtgtttt
     1021 aagtgcaatg atttgcgaaa gaaaaatgct ttttgatgtt gatccacaat gttttaatcc
     1081 accgccaaaa gttatgtcag cggtgatgag tttgattaaa actaaggatt ttgatgaact
     1141 ttgcgaaata gaaaatttca aaaattttct aaaagactgt tttaaagctc ctagaaaaca
     1201 actcttagga aatttaaaaa catataaagc aaaagtttta gaagttttaa gcactcttgg
     1261 cttaaaagaa aacatcagac cacatgaaat ttgcgttgat tcatacctta aaatttatga
     1321 caaattaaag gatgaatatg gacgaaaaca aagagataaa taaaaacgaa caaaatccga
     1381 actcaaattc aaaaaacaat aaacgctata aatataaaaa tcgcagaaaa aaattagccg
     1441 attctttaca aaatgaaaac gatactccaa aaatcgatca aaattccaac aaggaaattt
     1501 ctgaaaactc agaaaataaa actgagaaaa aaaagaaaaa aaatcgcaat cttccttcaa
     1561 aactcacagg taatgaagat tggcaaatcg ctcttgcaga atgtatagaa gctaaccgtg
     1621 tttcacatga aaaccgctta caccctttaa aatataacaa ttctagcgaa cataaaatcc
     1681 gcatcactcc tttagggggc ttaggagaaa ttggtggaaa tatcagtgtt tttgaaacca
     1741 ataaagatgc aattatagta gatataggta tgagttttcc tgatggaact atgcatgggg
     1801 tagatattat catccctgat tttgactatg taagaaaaat taaagataaa attcgtggta
     1861 tagtgatcac tcatgcacac gaagatcata tcggtgcggt gccttatttc tttaaagaat
     1921 tccaatttcc tatctacgct acacctttag ctttaggaat gatttcaaac aaatttgaag
     1981 aacatggctt aaaagcagaa cgcaaatggt ttcgccctgt agaaaaacgc cgtgtttatg
     2041 agataggcga attcgatata gaatggattc atatcacgca ttctatcatt gatgcttcag
     2101 cacttgcgat caaaacaaaa gcaggaacga ttatccacac aggtgatttt aaaatcgatc
     2161 aaactccaat tgatggctat ccaacagatt taggacgttt agcacattat ggagaagaag
     2221 gagttttatg tcttttaagt gatagtacaa attcttataa agaaggttat acaaaaagtg
     2281 aaagctctgt agggccaact tttgatcaaa ttttttcgcg tactaagggt agggtgatca
     2341 tgagtacttt tagttctaat atccaccgtg tttatcaggc tatcacttat ggtttaaaat
     2401 acggcagaaa agtttgtgtt attggtcgtt ctatggaaag aaatctttat actactatgg
     2461 aattaggcta tattaaactt gatagaaaaa ttttcatcga tgctgatgag gtaagcaaat
     2521 ataaagacaa tgaagtgctt attgtaacta caggaagtca aggcgaaacc atgagtgcgc
     2581 tttatagaat ggcaactgat gagcataaat ttataaagat taagcctaca gatcaagtaa
     2641 tcatttcagc taaagccata ccaggaaatg aagcaagtgt ttctgcggtg cttgactatc
     2701 ttttaaaagc aggagctaaa gtagcgtatc aagaatttag tgaaattcat gtaagcggac
     2761 acgctagcat agaagagcaa aaacttatgc taacccttac taaacctaaa tttttcttac
     2821 cggttcatgg agaatacaat catatcacca aacacaaaga aacagcgatg aaatgcggta
     2881 tccccgaaag aaatatctat cttatgagtg atggcgatca agtagaactt tgccaaaaat
     2941 atgtcaaacg cataaaaacc gtaaaaacag gtaaagtttt tgtggataat caaatcaaca
     3001 aacaaattgc cgatgatgta gttatagatc gtcaaaaact tgcagatagt ggtatagtag
     3061 ttattatcgc acaaattgac aaaactacaa aaacactgat caacaagcca agagtgttta
     3121 gctatgggtt agtagctgac aaacacgatc atgcttttag taaagatatg gctgaagttt
     3181 tagggcaatt tttcatcaat gttaaagatg aagtactcaa tgatccaaga tttttagaaa
     3241 accaaatccg ccaagtctta agaaagcata tctttagaaa gattaaaaaa tacccaacca
     3301 tagttccaac tatttttgta atgtaaaaaa gggcaaaaac gcccttttta aggaagatca
     3361 aatgagaatt aataaattta tatcccataa cactcgttat tcacgccgtg aagctgatga
     3421 acttatcaaa caaggcttag taaaaataaa caacaaaatt gcccttttaa gcgatgaagt
     3481 taaatttgat gataaagttt ttgttaaagg taaaagagtg caaaaaagaa cgcaatttag
     3541 cgtgataatc taccataaac aaaaaggtga aattgtcagt aaaaaagacg atcgtggaag
     3601 aaaaactata tacgatacct tgccaagaca atttagtact tggcttagcg taggtagatt
     3661 ggattatgca agcgagggct tgcttttgct tacagattct cctgtgattg ccgatgcttt
     3721 aatgcatagc gatttagaaa gagaatacta ccttaaagtt aaaggcacgg tgagcaaaca
     3781 agtcatcgaa gccatgcaaa atggacttga gattaaaaat gaaaaaaaag gcgcacatgc
     3841 aaaaactaaa attacctcta tgagttttgc tccttttata gactttgaaa tttttggatc
     3901 aagtggaggt tatactaagc ttagagtggt tataaatgaa ggtaaaaata gagagcttag
     3961 acgctttttt ggacattttg atcttgaagt catggatctt aagcgtgttg cttttggggc
     4021 tttagatctt ggtatgttga aggcaggaaa acatcgctat ttggaaaatg gagaatatga
     4081 aaaattaaga gattttttaa aatttaatga aataagatat tgaccattat atacaaaaat
     4141 ttaaaaaata atgataattt ttaaattcta aaaattcta
//
LOCUS       DARBAC010000116         4105 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.116, whole genome shotgun sequence.
ACCESSION   DARBAC010000116 DARBAC010000000
VERSION     DARBAC010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.116"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..248
                     /locus_tag="SB799_001531"
     CDS             <1..248
                     /locus_tag="SB799_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HEG0868757.1"
                     /translation="FIDSKKYLNGYMDAFEENEIKIKNNLITEEEILQYLQMRKDLLF
                     KLKDILDEELNFIKINYPKHLKQWKYYQKFEQMCNET"
     gene            238..771
                     /locus_tag="SB799_001532"
     CDS             238..771
                     /locus_tag="SB799_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEG0868758.1"
                     /translation="MKHNLTIWLTGLAGSGKSYIAQALYRKLKEKYDNVIYLDGDELR
                     ELLGCFSYDKKGRMDVSFKRSDFARFLSNQGMIVIVSAISMWNEIYEYNRKYLKNYFE
                     IYIKCEFEELKRRDKKNLYTQALKGEISNVVGVDIPYDEPNADLVIDNTQMAALDDKV
                     CLILTALSQNLDNSKCE"
     gene            772..1818
                     /locus_tag="SB799_001533"
     CDS             772..1818
                     /locus_tag="SB799_001533"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF003166.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HEG0868759.1"
                     /translation="MLQVTHENFLDLKYFASGVFYPLEGFMNYEEYKKVIYEMQLLNG
                     EIWTLPITLEVDDFKDIYVGQKQDLYYQDKFIGNIQIEDKFCVQDRDLYEIFQTKDEK
                     HPGFIKEKKRSSLRVGGKIELKEEFYKDSLYKNILKDVFDTDIKTIVGFQTRNPIHRA
                     HEHLQRIALEICDALFINPLTGWKKQGDFTEAAVMSAYKTMFDEFYPKDRVYIQGLQT
                     AMRYAGPKEAIFHALLRRNMGCTHFIIGRDHAGVGDYYGIYEAQKLAKDLSMRYDLGI
                     DFLLLKEPYYCSKCQKIVSEKNCAHYKEHRIAISGTQIRKDLSEGKIPSELMMRSEIS
                     ASILALGRENIFID"
     gene            1829..2788
                     /locus_tag="SB799_001534"
     CDS             1829..2788
                     /locus_tag="SB799_001534"
                     /inference="COORDINATES: protein motif:HMM:NF012449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868760.1"
                     /translation="MKKLILTTGPSLGGKINLNQIHQDKFIYRINGAHGDIESIKNTI
                     INLRKQKADIDILIDLPGNKIRTSGISEAIQVEKDKDFSLKIDQFNYKEFYKLVKPGM
                     EVYANDSVFLFIVKEVNDKEIIFTSKSTGLLLNNKGMHVRNLHDNIPFLFEKDKELIK
                     LCNEFDIAYVGASFVRKASDIQELKQVLHSNTKIISKIETLEAVNNLYSILQEVEYIL
                     IDRGDLSTEIGIEKIPRFQNYIVEMAHHNAIKVFLATQILKNMEEKPIPTIAEIDDLY
                     NIAKSGVFGVQLSEETAVGHYVEECVKILNLIQDEINNEKIIL"
     gene            2798..4051
                     /locus_tag="SB799_001535"
     CDS             2798..4051
                     /locus_tag="SB799_001535"
                     /inference="COORDINATES: protein motif:HMM:NF013188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEG0868761.1"
                     /translation="MKFESLSPENISIIFLSLGVLLFSSFVFGKLFTLFKAPKVIGEI
                     FGGFVLGASGLYIFAPDLLTDIFNGFNEQGKILNIFYQLGLIFLMFIAGFNTQISFEK
                     QNIKIISTLFLGGTFLSAGVGYFFIDYFKESFIGIKGNDLSFDLVFLIAIAVTSIPVI
                     SKIFFDIGVIKTRFASIVLTTSTIQDLFLWILLNITINAATNQDLTLMSNLKTAFLTL
                     FLFIAVKVISHFFEKISFRMSTIDFFTLSFVVLFLSIAFLNMIHINPMYTSFLVGFLI
                     KNILNNHQELREKVNGISDMAFSFFIPIYFALIGIQLNIMHEFSFNMFIFFLILACLL
                     KFLGCYIGLNFVKISNISRINFAITMNARGGPGIVLASVAYYYQIINVSFFTTLILTV
                     LISSMMAGYWLRYQKNKNINIFSEF"
BASE COUNT         1489 a          404 c          680 g         1532 t
ORIGIN      
        1 attttataga tagcaaaaaa tatttaaacg gttatatgga tgcgtttgaa gagaatgaga
       61 taaagattaa aaacaatctt attacagaag aagaaatttt gcaatattta caaatgagaa
      121 aagatttgct atttaaatta aaagatattt tagatgaaga attaaatttt ataaaaataa
      181 attatccaaa gcatttaaaa caatggaaat attatcaaaa atttgagcag atgtgtaatg
      241 aaacataatt taactatttg gcttacaggt ttagcaggaa gtggtaaaag ttatatagca
      301 caagcattgt atagaaaatt aaaagagaaa tatgacaatg ttatctatct tgatggagat
      361 gagttaagag agcttttggg atgtttttcc tatgataaaa aaggtcgcat ggatgtatcc
      421 tttaaacgat ccgattttgc tcgtttttta agtaatcaag gaatgatagt tatcgtaagt
      481 gcgatttcta tgtggaatga aatttatgag tataaccgca aatatttaaa aaattatttt
      541 gaaatttata taaaatgtga atttgaagag ttgaaaagac gtgataaaaa gaatttatat
      601 actcaagctt taaagggtga aatttcaaat gtcgtgggtg tagatattcc gtatgatgaa
      661 ccaaatgctg atttagtgat tgacaatacc caaatggcag cacttgatga taaggtttgc
      721 cttattttaa cagcactttc tcaaaattta gataattcaa agtgtgaata aatgctacaa
      781 gttactcatg aaaattttct agatttaaaa tattttgcta gtggtgtgtt ttatcctttg
      841 gaaggtttta tgaattatga agaatataaa aaagtaattt atgaaatgca acttttaaat
      901 ggtgaaatat ggaccttgcc tattacttta gaagtggatg atttcaaaga tatttatgtg
      961 ggacaaaagc aagatctata ttatcaagac aaatttatag gaaatattca aattgaagac
     1021 aaattttgcg ttcaagatcg ggatctttat gaaatttttc aaactaaaga tgaaaaacat
     1081 cctggtttta taaaagaaaa aaaacgctct tctttgcgtg ttggtggaaa aatagaactt
     1141 aaagaagaat tttataaaga ttctttatat aaaaatattt taaaagatgt ttttgatact
     1201 gatattaaga ctatagtggg ttttcaaaca agaaatccta tccacagagc tcatgaacat
     1261 ttgcaaagaa ttgcgcttga aatttgcgat gctttgttta ttaatcctct aacaggctgg
     1321 aaaaagcaag gagattttac tgaagcagca gtgatgagtg cttataaaac tatgtttgat
     1381 gagttttatc ctaaagatag agtttatatt caaggtttac aaactgctat gcgttatgca
     1441 ggtcctaaag aagctatttt tcatgcttta cttagaagaa atatgggttg tacccatttt
     1501 atcattggta gagatcatgc gggagtggga gattattacg gaatttacga ggcgcaaaag
     1561 ttggctaaag atctatcaat gcgttatgat ttaggtatag attttttact tttaaaagaa
     1621 ccttattatt gttctaaatg tcaaaaaatt gtgagtgaaa aaaattgtgc acattataaa
     1681 gaacatagaa ttgcaattag tggtacgcaa attagaaagg atttaagcga gggtaaaatt
     1741 cctagcgaac ttatgatgcg ttcagaaatt tctgctagta tacttgcttt aggtagagaa
     1801 aatattttta ttgattaaag gattgataat gaagaagctt attttaacaa caggtcctag
     1861 tttaggtgga aagataaatc ttaatcaaat tcatcaagat aaatttattt atagaatcaa
     1921 tggagctcat ggagatatag agagtattaa aaatactatt attaatttaa gaaaacaaaa
     1981 agctgatatt gatattttga ttgatttgcc aggaaataaa attagaactt cagggattag
     2041 cgaagctatt caagtagaaa aagataagga tttttcttta aaaattgatc aatttaacta
     2101 taaagaattt tataagcttg ttaaaccagg tatggaggtt tatgcaaatg atagtgtgtt
     2161 tttatttatt gtaaaagaag ttaacgataa agaaattata tttacatcta aaagcacagg
     2221 attgctttta aataataagg gtatgcatgt aagaaatttg catgataata ttcctttttt
     2281 atttgaaaaa gacaaggaac ttataaagct ttgcaatgag tttgatatag cttatgtagg
     2341 agcttctttt gtaagaaaag caagtgatat acaagaatta aaacaagtgc ttcattcaaa
     2401 tactaagatt atttctaaaa ttgaaacttt agaagcagtg aataatttat acagtatttt
     2461 gcaagaagta gaatatattt taattgatag aggagattta tccacagaaa ttggtataga
     2521 aaaaattcca cgttttcaaa attatattgt agaaatggca catcataatg caattaaagt
     2581 atttttagct acacaaattt taaaaaatat ggaagaaaaa cccattccta ctattgcaga
     2641 aattgatgat ttatataata tcgcaaaaag tggagttttt ggtgtgcaac tttctgaaga
     2701 aacagctgta ggacactatg tagaagaatg tgttaagatt ttaaatttaa tacaagatga
     2761 aatcaataat gaaaaaatca ttctttaaga aagcaatatg aaatttgaat ctttaagtcc
     2821 tgagaatatt agtattatat ttttatcttt aggagtttta ttattttctt cttttgtttt
     2881 tggaaaatta tttactttat ttaaagcccc aaaagtaatt ggtgaaattt ttggtggttt
     2941 tgttttgggg gcaagtggtt tgtatatttt tgctcctgat ttacttacag atatctttaa
     3001 tggatttaac gagcaaggga agatattaaa tattttttat caattaggtt tgatattttt
     3061 aatgtttatt gcagggttta atacgcaaat tagttttgaa aaacaaaata ttaagattat
     3121 ttctacttta tttttaggtg gtactttttt atctgctggt gtgggatatt tttttattga
     3181 ttattttaaa gaaagtttta ttggaataaa ggggaatgat ttatcttttg atttggtttt
     3241 tttaatagcc attgctgtaa cttctatacc tgtgatatca aaaatatttt ttgatatagg
     3301 agtgattaaa acaagatttg caagcatagt tttaaccact tcaacaatac aagatttgtt
     3361 tttatggatt ttactaaata ttactattaa tgccgcaaca aatcaagatt taactttaat
     3421 gagcaatctt aaaaccgctt ttcttacttt atttttattt atagctgtga aggtaatttc
     3481 tcatttcttt gaaaaaattt cttttcgcat gagtacaatt gattttttta ctttaagctt
     3541 tgttgtgtta tttttatcta tagctttttt aaatatgatt catatcaacc ctatgtatac
     3601 ttcatttctt gtaggttttt taataaaaaa tattttaaat aatcatcaag aattaagaga
     3661 aaaagttaac ggtatttcag atatggcttt ttcatttttt attcctattt attttgcttt
     3721 aatcggtatt caattaaata ttatgcatga attttctttt aacatgttta tattcttctt
     3781 aattcttgcg tgtttattga aatttttagg ttgttatata ggattaaatt ttgttaaaat
     3841 ttctaatatt tcaagaatta attttgcaat tactatgaat gctagaggtg gcccaggaat
     3901 agttttagcg agtgttgcct attattatca gattattaat gtaagttttt ttacaacact
     3961 tattttaact gttttaattt cttcgatgat ggcgggttat tggttgagat atcaaaaaaa
     4021 taaaaatata aatatttttt ctgaattttg ataaaaatta tagaattgaa tttttgatat
     4081 aaaaaatttg ttataattct tttaa
//
LOCUS       DARBAC010000117         4067 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.117, whole genome shotgun sequence.
ACCESSION   DARBAC010000117 DARBAC010000000
VERSION     DARBAC010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.117"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(65..634)
                     /gene="efp"
                     /locus_tag="SB799_001536"
     CDS             complement(65..634)
                     /gene="efp"
                     /locus_tag="SB799_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEG0868762.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            748..1068
                     /gene="rnpB"
                     /locus_tag="SB799_001537"
     ncRNA           748..1068
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="SB799_001537"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1066..1341)
                     /locus_tag="SB799_001538"
     CDS             complement(1066..1341)
                     /locus_tag="SB799_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868763.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLTKESPSED
                     FLKENANDLFYQVQALLQEAVMLIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(1322..1708)
                     /gene="fliS"
                     /locus_tag="SB799_001539"
     CDS             complement(1322..1708)
                     /gene="fliS"
                     /locus_tag="SB799_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HEG0868764.1"
                     /translation="MQNNLAYNAYSQNQAGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLDYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            complement(1720..3651)
                     /gene="fliD"
                     /locus_tag="SB799_001540"
     CDS             complement(1720..3651)
                     /gene="fliD"
                     /locus_tag="SB799_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HEG0868765.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSKGLANDSGFVNANLTGTTDLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDAQGQYQSDPEA
                     ENIFSNLGWELDKTTQTIDPAKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTV
                     TDLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGT
                     KGTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAG
                     TLSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKQGSLNQYLDSSGTGNKG
                     LDFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKV
                     ESYDQNGVKGFKLNFSGDGSSDFSIKGNATILQELGLSDVNITSKPIEGKGIFSKLKA
                     TLQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKL
                     NQQLNTVTNMINAANNSNN"
     gene            complement(3654..4019)
                     /gene="flaG"
                     /locus_tag="SB799_001541"
     CDS             complement(3654..4019)
                     /gene="flaG"
                     /locus_tag="SB799_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HEG0868766.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQGQEGDDGQ
                     QRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
BASE COUNT         1231 a          780 c          554 g         1502 t
ORIGIN      
        1 agtaacaaaa taaattttat ataaatttaa aaaagccttg gaatagtcca aaagcttttt
       61 tgtattactt gttcgctctt tctatatact caccacgcac agtatcaacg cgtataactt
      121 caccttctag cacgtgaaaa ggaatttgca ctactgcacc tgtttctaat gtagctggtt
      181 ttttatttga tccttgagta tcacccttaa aatttggagc tgtttcgatg attttgagtt
      241 caacaacttg tggaacttct acgccgatag ctttaccatt gtggaaaagc acatctacca
      301 tcataccatc aagcatccat ttttttgcct cacctacatc atcatcactg atagctactt
      361 gttcatatgt ttgtgtatcc ataaattggc aattttcacc atcatcataa agatactgca
      421 tagttttatc ttctaaattt ggagcttcac atttatcacc tgcatggaaa gttttttcaa
      481 gtactttacc atcaataaaa gatttgattt taatacgcac aaaagcagga cctttgcctg
      541 gttttacatg ctgatactca actattttaa aaggaattcc atcgatttct attttaagtc
      601 ccttttttaa atcacccatt gaataagatg ccataaattt cctttgttaa aaaataaaaa
      661 ataattttat caaattttga ttgatatcac aataaaatta ttttatttga tgaaaaaata
      721 agtaaaatta cgttaaaatc caaatttaaa gcatagtaaa tgctcgcttc tttttagaag
      781 aggaaagtcc gggctgctaa agacaaacat tccatctaac agatggctag ggtaacctaa
      841 gggatagtgc aacagaaaga aaactaccac gcaagtggaa aaggtgaaac ggcggggtaa
      901 aagcccacca gcgattttgg taacaatttc ggctatgtaa acccaatgtg cagcaagaag
      961 ggatggttag cgtctttgtt ttaacccttc gcttgatttt gtttgcaaaa acaaaactag
     1021 ataaatgagc attcaagaca gaactcggct tatcgctatg cttttttaag atttaaaata
     1081 tgtcaacgct ttttgaaatt tttgaatttc aacggctttt gtttttttct tttgttcaat
     1141 cagcataaca gcttcttgca aaagagcttg aacttgataa aatagatcat ttgcattttc
     1201 ttttaaaaaa tcttctgaag gcgattcttt ggttaaattt ttaataaaag ctttcatatc
     1261 aagttcatca agtaaatttt caagtttatt gacatcttct tggattaatg caagtttaaa
     1321 atcactgagc cactgtttca ttgttatgca cttctctcca agcttctagc aaacctttgg
     1381 ttacatttat aacttcattg attctatctt cgttattttc taaatttgcc aaagataaaa
     1441 gttgaatttc tcttgtataa agcccgctta aataatgtgc cacttctccg cctttttcat
     1501 aatctaaagt attaataagc tctataaaaa tagccgtggt tctttttaca aaatacactc
     1561 tttgttctat atcttcattt cttatggcta ctttagctct tgcacaaaaa cgcaaaattc
     1621 cctcataaag catttcaata agtttttgcg gagactctat ccccgcttga ttttgagaat
     1681 aagcattata agctaaatta ttttgcatct tttttatcct taattattag aattgtttgc
     1741 cgcattaatc atattagtta cagtatttag ctgttgattg agtttattta aaatactctc
     1801 atattgcaac cattgattcg ccattgtatc atatcttgta tcaatcatag cctgagttga
     1861 gtctttagag gtatttaatg atttaatatc atttgtcaaa ctctcatcat attttgtaat
     1921 tgaaccatct tttccagtca tctcttgcaa cgtggctttt aattttgaaa aaataccttt
     1981 accttctata ggtttagagg ttatatttac atcagacaaa cctaattcct gaagaatggt
     2041 agcatttcct ttgatggaaa aatccgaact accatctcca ctaaaattca acttaaaccc
     2101 tttaacaccg ttttgatcat aggattcaac cttaactttt aaaccttcaa tacctttgct
     2161 gtttatatga ttagctaaat tttgaagcaa ttcttcctct gtttttcctg ttaatttaaa
     2221 attagtacca tcagaatttt tagataaatc atatgtttga ttattaaaaa ctatagtaaa
     2281 atctcctggt ttaaaatcta aacctttatt gccagtgcca ctagaatcaa gatattgatt
     2341 caaacttccc tgcttaatta cttctcctgt gtgattaatg tcttcgtatt tagtaatatt
     2401 tgaaaaaaaa ctttcagtag agtctggatc ttctttaact ttttgttcaa atttagaaga
     2461 atcaaaactc aaagtgcctg catcatttaa acttaagcca aaatcctgca tagaaagcat
     2521 aaccttagtg ttcactttat taccatttgc atcttcagta gttccatcaa caacttgaga
     2581 atcaaacaaa tcagcaagaa tgcttgagcg tattgaattt acttcactga tgccttgtaa
     2641 agttcctttt gttccagttt cactattata gtcagttgca gcattaagat tggttactaa
     2701 atcattataa gcatccacca aatcttgcat ggcttttgtc acaccttcaa aatcttgctg
     2761 tacatcaaaa ttaatttcac ctgttttatt taaagttaaa gtcattccta caccaagatc
     2821 ggtaacagta ttacttgatc taaacatctt aataccatca agtgtgaatt ctgcattttg
     2881 cgcagtttgg atatgcaaag aagcatcctt aatgccataa ccttttttat ccttagctgg
     2941 atcaatagtc tgagtcgttt tatctaattc ccatccaaga tttgaaaata tgttttctgc
     3001 ctctggatca ctttgatact gaccctgcgc atcttttttt ccagcataga aacttatcgc
     3061 actgtcttcg cctgtttctt tactggttaa agttaagcgg taaggagtgc ctttctctcc
     3121 tgtgtttaca atcttagcga caatctctcc tccactagct tcattaattt tatcagctaa
     3181 atctctatag gttgtgtttt tatctaccgt aacagtatat tctttgccat ttgaaaaaaa
     3241 agtaagatcg gtggttccag ttaaatttgc attaacaaaa ccgctgtcat ttgctaatcc
     3301 tttgctttga tatacatctt tttgtgcaag ttgagtaaca ttaatattca tgctttgtaa
     3361 agcaacaccc gaattaactg taagacttgc tggaggatta tcgctaatac ttcctacaac
     3421 ttttcttttc gcaaaaaccg tagcatcggc taatgatgaa acagccgtct gaaaacttag
     3481 taatttagtt ttgatttctg ttaaatcttt ttgtttggtt gtattttctt caattttttt
     3541 agtataagga tcaatacgag ctttttgctc tgcttctttt aatttatcta tagtatcttg
     3601 agttaaaacc ccagaaccaa atcctaaact agatagacta ccaaatgcca tttttaactc
     3661 tccttatcaa atatcattcc tatcacatcc ctaaaatact cagctaatct catagcttct
     3721 tcactaggaa tttgacggat ttcccttcca gtgctttttt cagtcacgct aatatacata
     3781 gaaccgattt tatcactata accaaaacga acattggtat ctagagaatc catttgctca
     3841 tttaactttt ttgtaatatc agccaacttt tcactcacac ctcgttgctg tccatcatcg
     3901 ccttcttggc cttgacttct atcggtttga atgtttaaac tagcctgtgt ctcacttgtt
     3961 ctttggctaa tgtttgccaa agctgtatcc atttgcccat ttgccttcga tatttccatt
     4021 ttaaaatcct ttttaaaatt tcctattgct agttaaaagc ttatatc
//
LOCUS       DARBAC010000118         4060 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.118, whole genome shotgun sequence.
ACCESSION   DARBAC010000118 DARBAC010000000
VERSION     DARBAC010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.118"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            25..600
                     /locus_tag="SB799_001542"
     CDS             25..600
                     /locus_tag="SB799_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEG0868767.1"
                     /translation="MKKIFISFVVLATCLWAKNTAYTNEVVSLYLNKDDTKVIGRLLP
                     TNPFEVLKNENNRVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRITGK
                     NGKWDKVSLEIWADKKEFVKDNKEMLNRAKELFVNNCGICHAIHKEKEFTANAWPAIF
                     RSMADRTGIDKKDRWLVIEYLQKNAKDFKTK"
     gene            611..3127
                     /locus_tag="SB799_001543"
     CDS             611..3127
                     /locus_tag="SB799_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HEG0868768.1"
                     /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTVEASKVNLGLVKNGEV
                     ITAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAVKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQN
                     SRILLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVV
                     IWGADPLSTLRIAWTSNEQRGLAYFEKLKDSKIKVICIDPVKTTTAKFLNAKWIAPRP
                     NTDVALMMGMASHLIAKKKVNYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICG
                     IDEKTIKNLAETFYDNSTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGMTAGSLGIWKNGKFKGLAKSETSNEGAEWLQNAASYSFP
                     VARIADALLHPGKTIDHNGSKLTYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIVMPVTSSYERDDITMTGDYSNMHIAPMKQAVEPVGESKDDYVI
                     FSDICKIYGKDVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFATPMPSFEEFWAK
                     NEPITFEPTAESLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTW
                     FEPIEWLGNASKEAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKL
                     GIKNGDVVRVFNKRGEVLAGAVVSDEIMQGVVRLCEGAWYDPNENGLCKCGNANVLTM
                     DIPTSKLANGNISHTGLVNIEKFKGELPKLTAFSAPKGAN"
     gene            complement(3151..4026)
                     /gene="zupT"
                     /locus_tag="SB799_001544"
     CDS             complement(3151..4026)
                     /gene="zupT"
                     /locus_tag="SB799_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEG0868769.1"
                     /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     AGMAIMALSLNLLGQ"
BASE COUNT         1484 a          679 c          759 g         1138 t
ORIGIN      
        1 caaatttata ttaaggaatt agtaatgaaa aaaattttca tttcttttgt tgtcctagcg
       61 acatgtttat gggcaaaaaa taccgcctat accaatgaag ttgtatcgct ttatcttaat
      121 aaagatgata ctaaagtcat aggaagactt ttacctacaa atccttttga agtgttaaaa
      181 aacgaaaata acagggtttt gctaaaaatt gatggttatg taaatcctaa agcaccttct
      241 gtgatttatt tcaatgactc tcaaagaatt attgttgcag ctttttctaa aaatacaaaa
      301 ttaaatttct ctcaaagaat aactggaaaa aatggcaaat gggataaggt aagccttgaa
      361 atttgggcag ataaaaaaga atttgtcaaa gacaataaag aaatgttaaa tcgagccaaa
      421 gagctttttg taaataactg cggaatttgt catgctatcc acaaagaaaa agaatttaca
      481 gctaacgctt ggcctgcaat tttccgttct atggctgata gaacaggtat tgataaaaaa
      541 gacagatggc tagttataga atacttacaa aaaaacgcaa aagattttaa aacaaaataa
      601 ggagaaaagc atgctagata gaagaaaatt tttaaaaatt ggagcgagct taagtgcttt
      661 acctctcatc ccaagcttaa gtgcaggaaa aaccgtagaa gcttcaaaag ttaaccttgg
      721 acttgtaaaa aatggagaag tgatcaccgc agcacactgg gggattttaa aactcactat
      781 aaaagatggc aaaatagtaa aaagcgaacc ttgggaaaaa gttacaaaaa tggataatcc
      841 tttacagcac tataccgccg atatggttta taaatctcgt gtgaaatacc cttatgtgcg
      901 taaatcctac cttgaaaatc ctgacaatcc taaacctgag cttcgcggaa aagatgaatt
      961 tgttcgcgta agttatgatg aagcagtcaa acttatcgct aaagagctta aaaaaacaag
     1021 agatagtaaa ggtgcaagtg caatttttgg tggaagttat ggctggaaat caagtggaaa
     1081 tatgcaaaac tcacgtatct tgcttcatag atttttaaat gtaacaggtg gatttgtagg
     1141 agctacaggg gactattcta caggagcttc tcaagtgatt atgccttatg ttgtaggatc
     1201 gattgaagtt tatgagcaac aaacctcgtg ggaaaatatc ttaagcgatt ctaaatatgt
     1261 tgtgatttgg ggtgctgatc cactttctac tttacgcata gcttggactt caaacgaaca
     1321 aagaggtttg gcatactttg aaaaacttaa agacagtaaa atcaaagtaa tttgtataga
     1381 tcctgtaaaa accactacag caaaattttt aaatgccaaa tggatagctc cacgcccaaa
     1441 taccgatgta gctttaatga tgggcatggc aagccattta atcgctaaga aaaaagtcaa
     1501 ttacgagttt ttagacactt acactacagg ctttgataaa tttaaagact atttagaagg
     1561 caaagaagat ggagtgaaaa aagataccaa atgggcaagt aaaatttgcg gtatcgatga
     1621 aaaaactatc aaaaatttag ctgaaacttt ttatgataat tctactatga ttatgagtgg
     1681 ttggggtatg caaagagcac atcatggcga acagcctcac tggatgttag ttactctttg
     1741 tgcgatgtta ggacaaatcg gcacaaaagg aggcggtttt ggactaagct accattacag
     1801 caatggcggt gttccaactt gcaaaggcgg agttatcggc ggtatgacag caggtagctt
     1861 agggatttgg aaaaatggta aatttaaagg tttagcaaaa agcgaaactt caaacgaagg
     1921 tgcagaatgg cttcaaaatg cagcgagtta ttctttccct gtagcaagaa ttgctgatgc
     1981 tttacttcac cctggaaaaa ccatagatca caacggctct aagcttacct atcctgatat
     2041 tgattttatt tactgggtag gcggaaatcc tttagtacat catcaagata ccaacactaa
     2101 tgtaaaagca tggagaaaac cacgcaccgt tgtggtaaat gaaatttact ggactccaac
     2161 agctaaaatg gcagatattg ttatgcctgt aacttcatct tatgaaagag atgatattac
     2221 catgacagga gattattcaa atatgcatat agctcctatg aaacaagcag ttgagcctgt
     2281 gggtgagagc aaagatgatt atgtaatttt ctctgatatt tgcaaaattt atggaaaaga
     2341 tgtctttaat gcctacacag aaaatggcaa aaaagctaaa gatttcatca aagaatacta
     2401 caacagtgcc ctaaaacaaa ctcaaagttt tggcgaagct tttgctactc ctatgccaag
     2461 ttttgaagaa ttttgggcta aaaatgaacc aatcactttt gaaccaacag ctgaaagttt
     2521 agaatggact cgtttttcag aatttataga agatcctatc ttaaatgctc tgggtacaga
     2581 ttcaggactc attgaaattt actcagaaac gattaaaaat tataattatg atgattgcaa
     2641 agcccaccct acttggtttg agcctattga atggcttgga aatgcaagca aagaagcacc
     2701 tttccacttg cttacaaatc acccaagaga tcgcttgcac tctcaacttt gccacacaag
     2761 cttaagagat acttatgcaa taaaagatag agagccgatt ttaatcaatt ccaaagatgc
     2821 aaaaaaactt ggtataaaaa atggcgatgt agtgcgtgtg tttaataaac gcggtgaagt
     2881 tttagcaggg gcggttgtaa gtgatgaaat catgcaaggg gttgtaagac tttgcgaagg
     2941 tgcttggtat gatcctaatg aaaacggact ttgcaaatgt ggaaatgcaa atgttttaac
     3001 catggatata ccaacttcaa aacttgccaa tggcaatatc tctcacacag ggctcgtaaa
     3061 catagaaaaa tttaaaggtg aattaccaaa acttactgcc tttagtgctc caaaaggtgc
     3121 gaactaaatt taagaaagcc gcaaggcttt ctattgtcca agcaaattta aacttaaagc
     3181 cattattgcc attcctgcga taagtccata taaactatca tgagccttat cataagtttt
     3241 tgcagcgggc aaaagctcat caagagatat aaaaaccata attcctgcaa ttacagcaaa
     3301 acttatagct aaagtaagat cgcctataaa aggcaataaa atcaaagctc caacaaaagc
     3361 acccaaaggc tctgcaaaac ccgaaagagc tgaataaata aaagcttttt tcttatctcc
     3421 tgtagcatgg taaattggca aactcacagc caaaccttca gggatattgt gtatagccac
     3481 agctatagct atagcaattc ctaaagtaag attatcaaga cttgaaataa aagtagcaaa
     3541 accttctggg aaattatgta tagcaatagc caaagctgta aaaatccctg tacgttttaa
     3601 agctttggta ttgatctgat gcaacttttc tccaggatga aatttcggag gattttgtcc
     3661 tttttggggt aagggacaaa tttttaactc gcttaaatcc tctttaggtt cgtgaggatt
     3721 gacatcttcg gggattaatt tatcaatcaa taaagatatt aaaattccac caaaaaaaca
     3781 agctaatccc aaaagctcag cccaatgcga atcatagtga tttttaaaat ctttaagtgc
     3841 agtaggtaaa atttccatga aagaaatgta tatcattact ccagctgaaa aaccaagccc
     3901 caaagaaagc actcttaaat catcttttct ggaaaaaaag gctattatag aacctatagc
     3961 cgtagaaaaa cctgcaaaaa gagtcaatag cattgcgata aaaatttgtt caaatgtaaa
     4021 ttgcattaat attcttaaat aaataatatt ttaaaactct
//
LOCUS       DARBAC010000119         4048 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.119, whole genome shotgun sequence.
ACCESSION   DARBAC010000119 DARBAC010000000
VERSION     DARBAC010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.119"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..513)
                     /locus_tag="SB799_001545"
     CDS             complement(<1..513)
                     /locus_tag="SB799_001545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868770.1"
                     /translation="MKDMRMQARGLILYKDFDSAIIGTSMLENTSAKEANKKLGGNWI
                     NLSLGGSTFALRAVILDYLFKHKDIKNIIYSLDIRALNELETPKDKNFISLYNDKTID
                     LFKLYLSSRFINCAIFFSKKEKCIGKDNLDTLTNWFLENKNHFGGIEYWSKEWWHDKN
                     FQNEILQAQNF"
     gene            complement(661..2160)
                     /locus_tag="SB799_001546"
     CDS             complement(661..2160)
                     /locus_tag="SB799_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEG0868771.1"
                     /translation="MLFSSFTFIFAFLPLTLVGFYILKALQYYTSAKIFLILASLFFY
                     AYFKIDYIFILTFSTLVNFFLANLILRKENNRAGYTLLYLGIIFNLCLLAIFKYTDFF
                     LENFNLFSKLAHLDFNIPLPHILLPLGISFFTFQQIAFLVDCYKKSNIEDLLENKKVD
                     FIDYCLFISFFPQLIAGPIVHHKEMMPQFHSLLNKEKALIDWKLIAKGLFIFSIGLFK
                     KVYIADSFASWANAGFTVVQNGNFLNIFEAWATSLSYTFQLYFDFSGYCDMAIGLALF
                     FGIALPVNFNSPYKALNIADFWRKWHITLGRFLKDYLYIPLGGNRFGKFINLRNLFIV
                     AFLSGVWHGAGWGFVIWGILHAIAMISHRIYSFWAKGKTFLNSKIYKIISWFITFNFI
                     NIAWIFFRSENLQGAINLLKSMFGVIWVELPLKFKAGLLFKKIGGNDTMVGFILVSFI
                     LCICFKNSINMLQDFKSSFKNSLIVMFLFYIALITLIATPYTEFIYFNF"
     gene            complement(2212..3162)
                     /gene="waaF"
                     /locus_tag="SB799_001547"
     CDS             complement(2212..3162)
                     /gene="waaF"
                     /locus_tag="SB799_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEG0868772.1"
                     /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTAL
                     FKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLV
                     HLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP"
     gene            3221..4039
                     /locus_tag="SB799_001548"
     CDS             3221..4039
                     /locus_tag="SB799_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0868773.1"
                     /translation="MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDN
                     SLNIVLEFAKKDPRIKIFQNEENLGTFASRNIGVLHSSSDFIMFLDSDDFLTPGACEI
                     AFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVLNQKEFLEFLSKQRHFCWSVWAKC
                     FRKDIILKNFEKVKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYEN
                     KNKEILNQNYKDKKKSNEIIKRLSKEFLLDEFHQKLFEVLEREEKSLCMRANKI"
BASE COUNT         1508 a          522 c          611 g         1407 t
ORIGIN      
        1 aaaattttga gcttgtaaaa tttcattttg aaaattttta tcatgccacc attctttact
       61 ccagtattca atacctccaa agtggttttt attttctaaa aaccaatttg ttaaagtatc
      121 taaattatct tttcctatac atttttcttt ttttgaaaaa aatatagcac aattaataaa
      181 acgacttgag agatataatt taaataaatc aatagtttta tcattgtaga gtgaaataaa
      241 gtttttgtct ttgggggttt caagttcatt taaagctctg atgtctaaag aataaataat
      301 gtttttaata tctttatgtt taaataaata atctaaaatt accgctctta atgcaaatgt
      361 gcttccacct aaagatagat ttatccaatt acctcctagt tttttgtttg cttctttagc
      421 agaggtattt tcaagcatag aagtgcctat tatggcagaa tcaaaatctt tgtacagaat
      481 gagtcctcta gcttgcattc tcatatcttt catgtaagtt tcttttctaa aatatggtgg
      541 atgaaagaac caaaaaggat cgcgaatata aagcaatgta aaaagaatta ttacgagagg
      601 caaaggacat aataaagaaa aaagaatgaa ttttttatta gaagcaaaca atatttttcc
      661 ttaaaaatta aaatagataa attcggtata tggtgtagca ataagagtaa ttaaagctat
      721 ataaaataaa aacattacaa taagggaatt tttaaagctc gacttaaaat cttgaagcat
      781 attaatgcta tttttaaaac aaatacatag tataaaggag actaaaataa aacctaccat
      841 tgtatcattt ccgcctattt ttttaaataa aagccctgct ttgaatttta acggcaattc
      901 cacccaaatt accccaaaca ttgattttaa gaggtttata gccccttgta aattttcgct
      961 tctaaagaaa atccaagcta tattgataaa attgaaagtg ataaaccaag atataatttt
     1021 ataaattttc gaatttaaaa aagttttgcc tttagcccaa aaactataaa ttctatggct
     1081 tatcatagct atagcgtgta aaattcccca tataacaaaa ccccatccgg ctccatgcca
     1141 tactccgctt aaaaaagcta cgataaaaag atttcgtaga ttgataaatt ttccaaagcg
     1201 atttcctcca agagggatgt ataaataatc ttttaaaaat cttcctaaag taatatgcca
     1261 ttttcgccaa aaatcagcta tatttaaagc tttatatgga gaattaaaat ttacaggtaa
     1321 agctataccg aaaaaaagag ctaatcctat agccatatca caatatccac tgaaatcaaa
     1381 atagagttga aaagtatacg aaaggcttgt tgcccaagcc tcaaaaatat ttaaaaaatt
     1441 tccattttgc acaactgtaa atcctgcatt tgcccaagaa gcaaaactat cagctatgta
     1501 aactttttta aaaagtccta tagaaaatat aaacaagccc tttgctatta atttccaatc
     1561 gattaaagct ttttctttat taagtaaaga atgaaattgc ggcatcattt ctttatgatg
     1621 gactatagga cctgcgataa gttgcggaaa aaaactgata aataagcaat aatctataaa
     1681 atcaactttt ttattttcta ataaatcctc aatattactt tttttataac agtccactaa
     1741 aaatgcaatt tgttgaaaag tgaaaaatga aattcctaaa ggtagtaaaa tatgtggtaa
     1801 aggaatatta aagtctaaat gagcaagttt ggaaaaaaga ttaaaatttt ccaaaaaaaa
     1861 atctgtatat ttaaagattg ctagtaagca aaggttgaag ataataccta gataaagtaa
     1921 agtatatccc gccctattat tttcttttct taagataagg tttgcaagaa aaaaatttac
     1981 caaggttgaa aaggttaaga tgaaaatata atcaatttta aaataggcat aaaaaaataa
     2041 actagctaat attaaaaata tttttgcact tgtataatat tgcaaagctt ttaatatgta
     2101 aaagcctacc aaagttaaag gcaagaaggc aaaaataaaa gtaaaagagc taaaaagcat
     2161 aaacaacctt ataaaatttt acaatagttt tttattctaa ctaaaatttt tttatggagt
     2221 gcttaatttt ttaatttctt ctatcacctt ttcaggcttt agatctttca tgcatttatg
     2281 gtgctttaaa ggacaggttt tttgcataca aggcatacaa gctagatcta aatgcactaa
     2341 ttttgcgttt tgattttgcc aaggtgaagt ttgagtaaat ttcgtagggc caaaaatagc
     2401 cacggttttt atcttataaa ccgtacttat gtgcatagga ccactgtcat ttgtgatgaa
     2461 aagatcgcaa aaagcgatat tttgacaaag ggttttgatg gtggttttgt tgcaaagatt
     2521 ttttactttt atgttttgtt cttttaaaat ttgataaatt tcattacaaa gttcttgttc
     2581 ggattttcct gcgccaaaga ttaaaatttc atgactttgg ctgaaattta aagccacttt
     2641 agcaaaataa ctcgcatccc atctttttgc acttccaaag cttgcgccag gattgagtcc
     2701 tagaattttt ttaccatttt ttaagacaag agggtcttga agttttagct taaagggaag
     2761 ctttaagtct ttagaatgag cttttatact aagtgagttt tctataaaat aaaggtattt
     2821 taaaacttga tgttcttctt tgtgcttgtt tttgtcaaaa aaatatcttt gttttgtttt
     2881 aaggatatgc aagataatct tagaagaaaa cgcagatcta aaagcaaagc taagatcgat
     2941 cttaccaagt tctttgcgta aagatagggc ttgtttatag cgagattgtt tattttctat
     3001 gatgatttta gaattaggaa attctttaaa aagtgctgtg gaaaccaaag agccataaag
     3061 gataaattgg gcatttttaa aatgttcttt tatagcgtat aaagcaggtg aagccatcac
     3121 tgcatcgccc agccaagtgg gaagatgtat aaaaattttc ataaatttcc taaactttga
     3181 tagaattgtt tttattattt taacaaaatt taggaaaaat atgccacaac tttcgatcat
     3241 aatcccgctt tttaattctt gtgattttat ttcaagggct ttacaaagtt gtataaatca
     3301 gactttaaaa gatattgaaa ttttgattat cgatgataaa agtaaagata atagtttaaa
     3361 tatagtttta gaatttgcta aaaaagatcc aagaataaaa atctttcaaa atgaagaaaa
     3421 tttaggcact tttgcaagta gaaatatagg agttttgcat tctagttctg attttataat
     3481 gtttttagat agtgatgatt ttttgacacc tggtgcttgt gaaatagcgt ttaaagagat
     3541 gaaaaaaggt tttgatttgc tttgttttga tgcctttgta catagggtaa aaaccaaaca
     3601 attttatcgt tttaaacaag atgaagtttt gaatcaaaag gaatttttag aattcttaag
     3661 caaacaaagg catttttgct ggtcggtttg ggcgaagtgt tttagaaaag atatcatctt
     3721 aaaaaatttt gaaaaggtta aaatcgatga gcgtttgagt tacggtgaag atgtgctttt
     3781 ttgttatgtt tattttatgt tttgtgagaa aatagccgtt tttaaaactt gtatttatca
     3841 ttatgaattt aatccaaatg gaagatatga gaataaaaat aaagaaattt taaatcaaaa
     3901 ttataaagat aaaaagaaaa gtaatgaaat cataaaaaga ctatccaaag agtttttact
     3961 tgatgaattt catcagaaat tatttgaagt tttggagaga gaggaaaaga gtttatgtat
     4021 gagagcaaat aagatttagc tttataat
//
LOCUS       DARBAC010000120         4026 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.120, whole genome shotgun sequence.
ACCESSION   DARBAC010000120 DARBAC010000000
VERSION     DARBAC010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4026
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.120"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            331..898
                     /locus_tag="SB799_001549"
                     /pseudo
     CDS             331..898
                     /locus_tag="SB799_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851848.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
     gene            1188..2000
                     /locus_tag="SB799_001550"
     CDS             1188..2000
                     /locus_tag="SB799_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEG0868774.1"
                     /translation="MGIAKSLVAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIR
                     AQKLEMTNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLTTISESFTNFTN
                     YLEYNLYQSEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTSLLSLNAGIDAARAG
                     KLGRGFAVIADEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDK
                     SNEFSKIISNLINSGKEISDKLKQRSNVGEDFEKNVNQLKCYEDVLAKLNQY"
     gene            complement(2055..2408)
                     /gene="rplT"
                     /locus_tag="SB799_001551"
     CDS             complement(2055..2408)
                     /gene="rplT"
                     /locus_tag="SB799_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEG0868775.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     SAAFAKIAEAAKKAL"
     gene            complement(2502..2693)
                     /gene="rpmI"
                     /locus_tag="SB799_001552"
     CDS             complement(2502..2693)
                     /gene="rpmI"
                     /locus_tag="SB799_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEG0868776.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            2848..4014
                     /locus_tag="SB799_001553"
     CDS             2848..4014
                     /locus_tag="SB799_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868777.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQEGNENSLEQ
                     LSYIFNNTTYASEFGFRINEEGFFDKDLNKIANIPESYDINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLGQIS
                     RIYNNQEEIDLALSNIANLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYVNGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILNSYMSVMV"
BASE COUNT         1590 a          568 c          533 g         1335 t
ORIGIN      
        1 aataatttta acggagttta atcaatgttt tttaatttta aaaataaaag ctcagcgcaa
       61 aaagaagaga gtaaaaaagt tttagaagct ctatttcttc aagaaaatga acttgaagaa
      121 aaattaaaaa aaataaatat caagccaaaa ttaatcatag gctttgcgtc gtatcaactt
      181 aacctagcaa tcataggaaa taagattcaa aattctataa atgaacaatg tgatatcatc
      241 ttaagcaatg ctactgattt attgtgcaat cttgattcta actcaaacat tgaaaacagt
      301 ccttataaac aaaatatcca aggaataagc ttgatgcttt ttagcgaaga tatgatagaa
      361 aatctctgca caaataaaat caagcttttt agcaatataa aagattatac agaaagaaaa
      421 aaactgatag aaaaagaagt tttatctata aatatacctt ttgaagcaca ctgcacaaat
      481 actttgcatt atttaattta tgatggttta agtcaaagcg aaagttctct tttagaactt
      541 ttatacaaac acaaccccta tccttgtgct ttagtaggag gtggatctag tggaaatatg
      601 gactttagcg gaacatttat attttataac ggagaaatat taaaaaatca agctttaagc
      661 atacatgtcc aatttaaatc taaatatcgt tttgatttaa tgaaatctca aaattttaat
      721 cctcaaagca acattacctt taccatactt gatgcaagct tatatgatag gacggtacgt
      781 gaatttattg ataaaaaaac ctttcaatcc atcaacgcgg ttgaagcttt atgcaattat
      841 tttaactgta cttttgaaga acttaaaaat aaaatgcaag aatatacttt tgctttaaaa
      901 attggagaag actatcttat ttcccctatg gaaatcaacc cagataaaac attatttagt
      961 tattgtgata tagaaagcgc tcaagaatta agcttgctta aaaaacaaat tttattgaag
     1021 ccataaaaaa agattacgaa aaattttctc ttaataaacc aaaaccacta ggagcaattt
     1081 ttaatgattg tatcttaaga agacttcaaa acaaagaaca tttaaatcaa atccatttta
     1141 atgattttcc tatagttggt ttttctagtt ttggggaaat ttatggagtg ggaattgcaa
     1201 aaagtttagt ggcaatattt ttttatgaag ttgaaaattt taatgatttc aaacctagat
     1261 atttaaaaac tttcatacaa aaatacagcg attttaaata ctattatctt aatataagag
     1321 ctcaaaaact agaaatgaca aatgagatta ataaaataat tttaaatcaa ctcaaacaaa
     1381 atacatcaga aattgataaa aatacaagta tatttaaaga aatttttgaa gaacttgaaa
     1441 atataagaag aagtcttaca accattagtg aaagttttac caatttcact aactacctag
     1501 aatacaacct ttaccaaagt gaagaaaaaa tgaatttaga aaaagaagtg caatcttctt
     1561 tgaaaaatat agatcaatta aatagtattt tagatcttat ttcagggatt gctgaacaaa
     1621 ctagcctttt atctttaaat gcaggtatag atgctgctag agctggaaaa cttggtcgtg
     1681 gatttgcagt tatagctgat gaagttagaa aactttcaga aaatacccaa atgggtctag
     1741 gtgaaatgga aggagctatt aaattagtta ttcagaccat acaatccatt gcaaaaagtt
     1801 ccaattctag tactcaagaa atgaatttta taagggataa atccaatgaa ttttccaaaa
     1861 tcatttcaaa tcttataaat tcaggtaaag aaatttcaga taaattaaaa caaagaagca
     1921 atgtcggcga agattttgaa aaaaatgtaa atcaactcaa atgttatgaa gatgttctag
     1981 ctaaattaaa tcaatactaa aaaattaaga atttcaagaa atcaaaaatc ttgaaattct
     2041 tacactaaaa aaaattaaag tgcttttttt gcggcctctg caatttttgc aaaagcagca
     2101 gaatcattca tagctaaatc tgctagaatt tttctatcaa gttcaatacc tgctttttta
     2161 agaccattga taaatcttga ataacttaaa tcattaagcc tacaagcagc attgatacgc
     2221 acaatccaaa gacgacggaa gtctcttttt ttgcggcgtc tatcacgata agcatagact
     2281 agacttcttt ctaattgttc ttttgctttt ctaaaatgtt tgcggcgtcc actataaaaa
     2341 ccacgcgcta attttaaaac ttttttatgt ctgcggcgtc taacaacacc tgtttttact
     2401 cttgccattt ttatttcctt tcataaagtg gcgtccaaat ttggagcttg cccttgaaat
     2461 tttatctcag aggggagttt gaatgacttt tagtcaaaaa cttaaattcc tagcattttt
     2521 tcaacagctt ttacatttgt gctatgcaca tatttagctg tgcgaagatc acgcattctt
     2581 tttgcaggtt ttttagtcaa aatatgactt ctaaaagctg agcctctttt gattttattt
     2641 ttacctactt tgaagcgttt aactgcgctt ttaacgcttt tcatctttgg catacgcttt
     2701 ccttatttag ataaattttt atttttcaaa ttaaaagaaa agctaaatac tatcaaattt
     2761 tttctaattt ttgactgaat ttaattttta aaaaacttgg cacacctttt gcttataaaa
     2821 aatagcaata ttttggaaag atttaaaatg actataaatt cggcaaatcc atatcaaaat
     2881 ttaaccttat ctaatccttt gcagaatagc tctgctctaa atttgattaa agatagcaaa
     2941 gctttggatc aagaaggaaa tgaaaatagc ttagaacaat taagttatat ttttaataat
     3001 accacttatg ctagtgaatt tggatttaga atcaatgaag aaggtttttt tgataaagat
     3061 ttaaataaaa ttgcaaatat accagaatct tatgatatca acattaaaag tgttagaagc
     3121 atagcaaaag aactcgcaaa acaagatgaa aatttaaact acaataaaat tgatctacct
     3181 tatcttttaa atagctatca tagttcatta aaatctataa attcagaatt tttacaagat
     3241 gataatgctt atttaagtcg cgatcttatt tcaaaactat catcaggttt ttcaacagat
     3301 aatggagaat ttttaggcca aatttcaaga atttacaaca atcaagaaga aattgatttg
     3361 gcattaagca atatcgcaaa tttaaatact ttaatgttgg ataataaaat aactaatttt
     3421 cattttgata aagccataga aaatacttct tctaatgaaa ttttaaaacc ttatttaact
     3481 aaaaatgcag aagtatcaaa atctggtctt ttaatgaatt ttatctacca tgatataaaa
     3541 actcaaaacg aaaaagaatt taactttttt atgaaacctg ccactttaga actaagctct
     3601 catcaaaatt tacaaaaaat tctcaagggt gaaacagata tagaagatta catcaaaaaa
     3661 gaaaatgaaa aaaagatgag ttttgatctt tatctttatg ttaatggcgt agataaaaaa
     3721 acaagcactc aagacaaact atctgtattt tttcaacaat atattaacta ccaaaaagat
     3781 atggatttaa gagaatttgc aaattcaagt tcaatatttc aaatttatat cgatcaaaat
     3841 cgcaatgatt ttgatgctct taaaaaacaa tatcaaaacc aaagtcaaga tacgcaaaga
     3901 ttagaagaag caaatcaact acgttctagc tctatagaaa attttttaga tcgtcgtcaa
     3961 aaacaagcaa atataaataa aattttaaac tcttatatgt ctgtgatggt ttaaaataat
     4021 ttttta
//
LOCUS       DARBAC010000121         3903 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.121, whole genome shotgun sequence.
ACCESSION   DARBAC010000121 DARBAC010000000
VERSION     DARBAC010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3903
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.121"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..727)
                     /locus_tag="SB799_001554"
     CDS             complement(<1..727)
                     /locus_tag="SB799_001554"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEG0868778.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALEFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENID
                     LKNHKAKLHFYASSDVESLKNTAK"
     gene            complement(729..1190)
                     /locus_tag="SB799_001555"
     CDS             complement(729..1190)
                     /locus_tag="SB799_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEG0868779.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYTRPIYNTNKETKLKTIAHE
                     WKKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLV
                     FFKTGRGPNGMHVGIYMSKGKFIHLSTKGGVKEVELNNSYWKARYIGARRY"
     gene            complement(1199..2368)
                     /gene="nhaA"
                     /locus_tag="SB799_001556"
     CDS             complement(1199..2368)
                     /gene="nhaA"
                     /locus_tag="SB799_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEG0868780.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIVAFVVAGIAILAMLVLNILGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIITAFFIPMQTKNGEAFLEEIYESLKFWLAFVILPLFAFANAG
                     VNLSNIDIGAIFSGVSVGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFAARS"
     gene            complement(2365..3513)
                     /gene="nhaA"
                     /locus_tag="SB799_001557"
     CDS             complement(2365..3513)
                     /gene="nhaA"
                     /locus_tag="SB799_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEG0868781.1"
                     /translation="MQMIKKMVLSETFPGILLIFFTFLALLCKNSSLSVIYTDFFHAN
                     FTVGFDHFQISKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFAAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIR
                     DMYLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEHADKLAILIASFLSAIVGFIYLKIVK"
     gene            complement(3655..3837)
                     /locus_tag="SB799_001558"
     CDS             complement(3655..3837)
                     /locus_tag="SB799_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HEG0868782.1"
                     /translation="MVSDVSMGNANLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQVSSSSGLDIYA"
BASE COUNT         1519 a          729 c          484 g         1171 t
ORIGIN      
        1 ttttagcagt attttttaaa gattcaacat cgcttgaagc ataaaaatgt aattttgctt
       61 tatgattttt caaatctata ttttctcttt ctttaagaaa ttcaactata gcatctcctg
      121 aatgaattaa ttttgtttta tcaccaaaat acttacttaa agaacgtcct agtaaaggga
      181 aatgagtgca agcgagtatc aaagcatctg gagttgtgat atttttaaaa taatactcca
      241 tagcactttg caaaaaatct ccttcaaaaa taccttcttc aaccataggc acaaaaagcc
      301 ctgtagctaa agcatttata tttgtatatc cttgagataa caaacgcttt tgatattctt
      361 ctgatttaat ggttgctttt gtcgcaatga ctaaaatttc tttattttta tcatgcaaag
      421 cttttatcgt tgcttcaacc cctgcatcaa ttacgccata tactggaaaa tgtgcttttg
      481 ctcttaaagc atctaaagca taagcactag cagtattgca tgcaatgata agcatatcaa
      541 tttgaaattg ttcaaaaaat tccaatgctt caagacagaa ctttataata gtatctttat
      601 ctttcacccc ataaggaact cttgcggtat ctccataata gataatttca tcaaaaagtc
      661 tagcttcata aagagatttt aaaacactaa gccctcctac tccgctatca aatacaccta
      721 ttttcacttt aataccttct tgctcctata taacgagcct tccaataaga gttatttagc
      781 tcgacttctt ttactccacc tttagtagat aaatgtataa attttccctt gctcatataa
      841 ataccaacat gcataccatt tggccctcta cctgtcttaa aaaacaccaa atctcctgtt
      901 tgcaattttg atttagaaac ttttcttcca gaacctaatt gagtttttgt agtgcgaggt
      961 atgcgtatat taagctgagc taatgcgctc tgtgtaaatc ctgaacaatc agcacctttt
     1021 ttactagttc cacctaaaac ataaggagtt tttttccatt catgtgctat agtcttaagt
     1081 tttgtttctt tatttgtatt ataaatcgga cgagtatagt ttaaattttg ataaaaacta
     1141 catccgctta taaagaatat aatcgtgatg atgaaaaaaa tatgcctcat caatcccctt
     1201 aagatcgagc agcaaagaat ttaagataaa taaaacccca aatcccagaa caaaatgaag
     1261 ctatgagaat agctaaatta tctgcataat taaaaatatc gctaacttca tacgccaagc
     1321 catcgataaa caaactcatt gtaaaaccaa ttcctgtaag tatacaaacc ccataaagtt
     1381 gtttcaaatt tgaaccttgg ggcaaggctg caaatttaaa gcggattgcc aaataagaaa
     1441 acaaaaatac acccacttgt ttacccacaa aaagccccaa gaaaatacct acacttacac
     1501 ctgaaaaaat tgctcctata tcgatattgg ataaatttac cccagcgtta gcaaaagcaa
     1561 ataaaggcaa gataacgaaa gcgagccaaa attttagact ttcatagatt tcttctaaaa
     1621 atgcttctcc atttttagtt tgcatcggta taaaaaatgc tgttatgatt ccagctaaag
     1681 ttgcatgcac accacttttt aaaacactaa tccaaagaat aactgagcaa ataaaataaa
     1741 aagactttct tgttattcct aaaatattta aaacaagcat tgccaaaata gcaattcctg
     1801 caacgacaaa agcaactatt gataattttg tcgtataaaa aatagctata attaaaatag
     1861 cacccacatc atcaaaaata gccaaagaaa gtaagaaaat ttttaaactt gatggaatat
     1921 gtttgccaca catcattaaa atcgctaagg caaacgctgt atctgtggct gtaggtatag
     1981 cccaaccttt taaagtataa gcatctccta tatttaccaa agcaaacaac atcgcaggta
     2041 taagtatacc ccctaaagca gccataaaag gtaaaacaat atttttagga tttttaaaat
     2101 ccccgtgcaa aaattccttt ttaagctcaa gccctatagc aaagaaaaat atagatataa
     2161 gcccatcatt tatccaaagt aaaaaaggct tgttaagctc aaattcacct acactaaatc
     2221 cgacttttaa atttagaaat tctcgataat gttcgctaaa agatccattt tgcacaagca
     2281 aagcaagcaa agtacaaact ataagtaaaa caccaccaaa agcctcgttt aaaactaaag
     2341 tttttaattt atgtactata ttattcattt aacaatctta agataaataa aaccaacaat
     2401 ggcacttaaa aaactagcta ttaaaatagc aagtttatcc gcatgttcaa aaatatcact
     2461 atttttataa gccaaaccat caataaacaa actcatcgta aaaccaatgc ctgttaaaat
     2521 acatatacca taaaattttc catatttaat attttcaggt agttttgcaa gcttaagttt
     2581 gatagcaata aaacaaaaag taaaaacacc tagttgcttt cctaaaaata atcctagaat
     2641 aattccaagg cttacaggcg aaaataccga accaagatac atatctctga tatcgatccc
     2701 agcattagca aaagcaaata aaggcaagat aaaataaacc acccaaggat ttaaatcctt
     2761 aagaacttca tgcaaataag gttttttatt ttttgtatca agcggtataa ataaagaaat
     2821 aatcacacca gccaaagtcg catgtactcc acttttaagc atagctatcc acaatacaac
     2881 acctactaac acatacaaag aaagatgggt tatgtgataa taatttaaca aaagcagagc
     2941 aaatatacaa aacaagcaaa taataatcgc caaagctgaa agctgatctg tataaaataa
     3001 agcaataata acaatagcgc ccaaatcatc aaaaatagct aaagaaagta aaaaaagctt
     3061 taaacttgta ggaattttat ttcctaaaag catcaaaatg cccactgcaa aagctatatc
     3121 ggttgctgta ggtattgccc aacctttcat agcaaaatca tgggaataat taatagcagc
     3181 aaaaattaaa gcaggagtaa tcataccccc taaagctcca aatataggta aagatacagc
     3241 tcttatattt ttaagctgtc cgcgtaaaat ttcatatttt aactcaagcc ctatacatag
     3301 aaaaaatata gctatcaaac catcatttat ccataaatcc aacgactttg aaatttgaaa
     3361 atgatcaaat cctactgtaa aattagcatg aaaaaaatct gtataaataa cacttaaaga
     3421 agaattttta cataataagg ctaaaaatgt aaaaaatata agcaaaatac cagggaaagt
     3481 ttcacttaaa accatcttct ttatcatttg catccttgct cctaaataaa tattataaaa
     3541 atttaatacg ataaataaaa tggcaaaatt ataacgaaaa aatactaaag aaataattat
     3601 ttaaaaaaac aagctcaaga taccaacaag ttcttaagct tgttcttaag atatttaagc
     3661 gtaaatatcc aaaccactag agctagaaac ttgtggagcg gaggcttgag agacaccttc
     3721 cataccttcg atgagttcat tcatcaatgc ctcgtttgtg tccatagatt ttttcaaaac
     3781 tgaagtatta acagcagtca ttaaattagc attacccata gaaacatctg aaaccatatc
     3841 atcctccttt tagattgagt cttaagactt tatttaaatc ggatgatatt tttaaaactt
     3901 aat
//
LOCUS       DARBAC010000122         3889 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.122, whole genome shotgun sequence.
ACCESSION   DARBAC010000122 DARBAC010000000
VERSION     DARBAC010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3889
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.122"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1094)
                     /locus_tag="SB799_001559"
     CDS             complement(<1..1094)
                     /locus_tag="SB799_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEG0868783.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLHESALKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDITNLPYQSLITEENIINNVG
                     PILKYYRHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTNLKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVAKTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKTHGDYNFFTYGLDGKERLGTCTKVFAYTACI
                     TESADIINKPIHKAAFIQAIVVIIVVVFSVILLYFIVSKYLSPLAAIQTGLTSFFDFI
                     NHKTKNVSTIEVKSNDEFGQISNAINENIL"
     gene            1173..1601
                     /locus_tag="SB799_001560"
     CDS             1173..1601
                     /locus_tag="SB799_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEG0868784.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWAKWIEWLRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKFCKES"
     gene            complement(1596..2639)
                     /gene="acr3"
                     /locus_tag="SB799_001561"
     CDS             complement(1596..2639)
                     /gene="acr3"
                     /locus_tag="SB799_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter Acr3"
                     /protein_id="HEG0868785.1"
                     /translation="MLGFIDRFLTLWIFLAIFLGLILGIIFPNIALFWNLFEYKSVNV
                     VLTLCLILMMYPPLAKVDYAKLSKVFDSKKVILLSMILNWFIGPLLMFILAFIFLKDE
                     PLYMQGVIIIGLARCIAMVVVWSDLAKGDREYTSALVAMNSIFQILFFSTLAYIYLDF
                     LPKLLGQSTLATSLDIDFSALSKNVLIYLGIPFLMGFITRTLLLKYKSKRWYENTFLP
                     KISPITLITLLATIIIMCSYKANEVFHLPLEALKIAFVLTLYFIFMFFLTWFISKKNH
                     LSYPKTCSLCFSASGNNFELAIIICIATFGLHSEQAFASIIGPLVEVPVLILLVKWAL
                     GKSLNSKKMNQAS"
     gene            complement(2633..3055)
                     /locus_tag="SB799_001562"
     CDS             complement(2633..3055)
                     /locus_tag="SB799_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HEG0868786.1"
                     /translation="MKLAFICIHNSCRSQMAEALARHKAEKMGIDIEVFSAGSDTSKG
                     VNSQAIRLMREIYQIDMKKHYSKLIDSLPQNLDIVVSMGCGVACPSLKSRYYFDFGLK
                     DPSGSYDDEFRKIIQILDYKITALLQAIKTNSLKDFTC"
     gene            complement(3052..3369)
                     /locus_tag="SB799_001563"
     CDS             complement(3052..3369)
                     /locus_tag="SB799_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEG0868787.1"
                     /translation="MQKFLTIISAINDESRVLVLYHLLKYQELCVCDLQELLNMGQSR
                     LSRHLKILKDAGFLYVRRQGTWAYYGINNELLKLHSDLFENIKNLDIDNIVLEQNTCE
                     NDK"
     gene            complement(3379..>3889)
                     /locus_tag="SB799_001564"
     CDS             complement(3379..>3889)
                     /locus_tag="SB799_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEG0868788.1"
                     /translation="KFDTSKFLNNDFLENEFNEKSSCCSTKKCCSSKTHINLKQICID
                     SLKEYKKILPYALAGTFIGALIHGVFPSNFFEIYLKDYGILGVFIAAFIGVLLYMNCT
                     AMIPVALVLTQTGIPLGIMMSFLIAGSGCSLPELILLKRNFKTSFLILFALLIILIAI
                     LFGILMFFI"
BASE COUNT         1458 a          565 c          572 g         1294 t
ORIGIN      
        1 tgtaagatat tttcattgat agcatttgag atttgtccaa attcatcatt actttttact
       61 tctatagtag aaacattttt tgttttatga ttgataaaat caaagaatga agttaaacct
      121 gtttggatag ctgcaagtgg agagaggtat tttgatacga tgaaataaag gaggattacg
      181 ctaaatacta ctacaataat gacaacaatg gcttgaataa atgcagcttt atgaataggt
      241 ttatttataa tatcagcgct ttcggtaata caagctgtat aagcaaagac tttagtacaa
      301 gttccaagtc tttctttgcc gtctaatcca taagtaaaaa agttatagtc tccatgtgtt
      361 ttatatgcat ttagaacagg agaatgatca atggatggat ttaataattc tttattggtt
      421 gctgcaaata ttttattttt ttgatcaaat aaaaaagtat ttccaggagt ttttgcaact
      481 aaattttgca aatcttctga tggtatatcg acacccagta ctcctatgat tttgccatct
      541 ttataaatag ctttagaata cgttattaca tattgtttta aatttgtatc taaatatgct
      601 ggtgtaacaa aaatatcatt tgtttttaag gcttcttgat accaatcttt tgtctttata
      661 tctaaatcat cacgtaattc aggcattttt gcatcattag atttttgact aagtaaaact
      721 tttccattgt ttaaacctaa ataaacattt agtgcattta tactatgacg ataatatttc
      781 aatattggac caacattgtt aataatattt tcttcagtga ttaaagattg ataaggtaag
      841 ttcgtgatat ctttttctaa agctctagta aaagattgat ttgtggaacg gaaatcttca
      901 acggtagact gtgtgacttt aagtagatca gtttgatttt taagagcgct ttcatgtagt
      961 gaggtttttg taaaataaaa acttacaata cctagaacaa ttaaggcaaa aattgcaatt
     1021 aaatttgcaa tgagggaaag tttgatttta atactattca ttattttcct tttaatcttt
     1081 gttattttta gcataaaact aataatttgg ctattatttt atcacaaaaa aaataaaata
     1141 aatttttatt tttatcttaa aaaggagaaa atatggctta tactataaaa aaagtagaaa
     1201 aagaaacaaa aattagtgct catactttaa gattttgggc taaaaaaggt ttgtttcctt
     1261 ttgttcaaaa agatgaaaat agtgtgaaat atttttcaaa aagcgatata gaatgggcaa
     1321 aatggataga atggcttaga atttcaggta tgccaataga acaagtcaaa cattatataa
     1381 aactttgctc tttgggtata aaaactgcca aagagagaca agagatgtta aagcaaacaa
     1441 agaaaaaatt acaaaaccag attaaaacat taaaagaaag tgaaaaagtt ttaagcaaaa
     1501 agataaaaat ttatgaagaa atgcttgcaa atgaagtcga tgggtttaat ccagaaagca
     1561 aggactatca accttgtgat aagttttgta aagaatcatg aggcttgatt cattttttta
     1621 gaatttaaac ttttgcctaa tgcccatttt acaagtaaga taagtacagg aacttctact
     1681 aaggggccta taatgcttgc aaaagcttgt tctgagtgaa gcccaaaagt agcaatacaa
     1741 atgattatag ctaattcaaa gttatttcca ctagcactaa agcataaaga acaagtttta
     1801 ggataagaaa gatgattttt cttagaaata aaccaagtta gaaaaaacat gaagataaaa
     1861 tacaaagtca aaacaaaggc tatttttaaa gcttctaaag gcaggtgaaa tacttcattt
     1921 gctttgtaag aacacataat gataatagtt gctagcaggg tgataagagt tatagggctg
     1981 attttaggta aaaaggtatt ttcgtaccat cgtttgcttt tgtattttaa aagtagggtt
     2041 cttgttataa agcccattaa aaaaggaatt cctaaataaa tcaaaacatt tttacttaga
     2101 gctgaaaaat ctatatctaa acttgtagct aaagtgcttt gacctagtaa ttttggtaaa
     2161 aaatccagat aaatataagc caaagtggaa aaaaataaaa tttgaaaaat gctattcatc
     2221 gctactaaag cactggtgta ttctctatca ccttttgcta aatcgctcca taccaccacc
     2281 attgcgatac atcttgccaa gccgatgatg ataactcctt gcatatataa aggctcgtct
     2341 tttaagaaaa taaaagctaa gataaacata agcaaagggc ctataaacca atttaaaatc
     2401 atagaaagca agataacttt tttagaatca aatacctttg aaagctttgc ataatcaacc
     2461 ttagccaaag gcggatacat catcaaaata agacataaag tcaatactac atttacagac
     2521 ttgtactcaa ataaattcca aaataaagcg atattgggga aaatgatacc taaaattaaa
     2581 cccaaaaaaa tagctaaaaa tatccaaagc gtgagaaatc tatcgataaa acctaacatg
     2641 taaagtcctt aagagaattt gtctttatgg cttgtaaaag agctgttatt ttataatcta
     2701 aaatttgaat tattttccta aattcatcat cataacttcc gctaggatct tttaatccaa
     2761 aatcaaaata ataccttgat tttaagctag gacaagccac gccacaaccc atacttacga
     2821 ctatgtctaa attttgaggc aaagaatcaa tgagtttaga ataatgcttt ttcatatcga
     2881 tttgataaat ttcacgcata agtcttatag cctgtgaatt tacaccctta gaagtgtcgc
     2941 ttcctgcgga aaatacttcg atatctatgc ccattttttc agctttatgc ctagctagtg
     3001 cttctgccat ttgagaacgg cagctattgt gaatacaaat aaatgcaagt ttcatttatc
     3061 gttctcgcaa gtgttttgtt ctaaaactat gttgtcaata tctagatttt taatattttc
     3121 aaaaaggtca gaatgcagtt ttaaaagctc attattaatc ccataatacg cccaagttcc
     3181 ttgacgcctt acatacaaaa aacctgcatc ttttaaaatt tttaaatgtc ttgaaagtct
     3241 tgattgaccc atgtttaaaa gttcttgtaa atcacaaaca caaagttctt gatattttaa
     3301 aagatggtat aagacaagca ctctgctttc atcgttgatc gctgaaatga tggttaaaaa
     3361 cttttgcatt aaaatccttt atataaaaaa cattaagatt ccaaataaaa tagcaattaa
     3421 aataatcaaa agggcaaaaa gtattaaaaa acttgtttta aaattccttt taagtagaat
     3481 taattcaggt aaagaacaac ccgatcctgc aattaaaaaa ctcatcatga ttcccaaagg
     3541 aattcctgtt tgggttaaaa ccaaggccac aggtatcatt gctgtgcaat tcatataaag
     3601 caaaacacct ataaaagcag cgatgaatac tcctaaaatt ccataatctt ttaaataaat
     3661 ttcaaaaaaa ttacttggaa aaaccccatg tattaatgcc ccaataaaag ttcccgcaag
     3721 agcatagggt aaaatttttt tatattcttt caggctatcg atacaaattt gtttaagatt
     3781 tatatgagtt ttgctagaac aacatttttt tgtgctgcaa caactacttt tttcgttaaa
     3841 ctcattttct aaaaaatcat tatttaaaaa tttgcttgtg tcaaatttt
//
LOCUS       DARBAC010000123         3809 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.123, whole genome shotgun sequence.
ACCESSION   DARBAC010000123 DARBAC010000000
VERSION     DARBAC010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.123"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..502
                     /gene="gmhB"
                     /locus_tag="SB799_001565"
     CDS             <1..502
                     /gene="gmhB"
                     /locus_tag="SB799_001565"
                     /EC_number="3.1.3.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEG0868789.1"
                     /translation="FLDRDGVINIDKKYVYKIEDFEFCDGIFELCRYFLARNYLLFVA
                     TNQSGIARRYYKESDFLKLCDYMLKEFAKQDVKIDKIYHCPHLEGCECRKPKAGMLLK
                     AKDEFDLDMKNSIFIGDNLSDMQAGLNANIGTLILVNEEKKEGDFFRQFKNLKEILSF
                     FKEKDI"
     gene            503..1456
                     /gene="rfaD"
                     /locus_tag="SB799_001566"
     CDS             503..1456
                     /gene="rfaD"
                     /locus_tag="SB799_001566"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEG0868790.1"
                     /translation="MKIAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIKDFRPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEKPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPCLFEGSDQIYRDFT
                     YIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWDYRPKFTLEEGIKDYLGEIKRLFEKEVNA"
     gene            1449..2834
                     /gene="rfaE1"
                     /locus_tag="SB799_001567"
     CDS             1449..2834
                     /gene="rfaE1"
                     /locus_tag="SB799_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEG0868791.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDKSGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDISAILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVI
                     KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFALCYSIITLSEAGIALFDEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLASGIEIF
                     KACELANEAAAVVVSKIGSMSVSFDEIKSFNRVDFEKKIKSKEELLTLLKQNDKKIVF
                     TNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILIKGADYKDKLVVGADIVSKVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            2831..3391
                     /gene="gmhA"
                     /locus_tag="SB799_001568"
     CDS             2831..3391
                     /gene="gmhA"
                     /locus_tag="SB799_001568"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEG0868792.1"
                     /translation="MINLVEKEWQEHQKIAQESEILKGQIAKAGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNENDVLIGISTSGKSPNVLEAFKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDEGF"
     gene            complement(3395..>3809)
                     /locus_tag="SB799_001569"
     CDS             complement(3395..>3809)
                     /locus_tag="SB799_001569"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868793.1"
                     /translation="YLLSFIKKYQKTQFYLIIPSYSRLNYRKLSYGEYYNKDSVLFSN
                     YYAILSWIIQETQKYPNVKIYGFDDLDYADNIKNYKDPAHYNTDMNSMQLNAIRDNTH
                     ILNTQNIVKYLNTMERKIKEFDLTPFVEYIKNQNF"
BASE COUNT         1336 a          446 c          764 g         1263 t
ORIGIN      
        1 atttttagat agagacggtg tgattaatat agataaaaaa tatgtctata aaatagaaga
       61 tttcgaattt tgtgatggaa tttttgaact ttgtagatat tttttagcta gaaattattt
      121 gctttttgta gcgacaaatc aatcaggtat tgcaagaaga tattacaagg aaagtgattt
      181 tttaaagctt tgtgattata tgcttaaaga atttgccaag caagatgtaa aaattgataa
      241 aatttatcat tgtccgcatt tagaaggttg tgagtgtcgc aaacctaaag caggtatgct
      301 tttaaaagca aaagatgagt ttgatttgga tatgaaaaat tctatcttta tcggagataa
      361 tctaagcgat atgcaagcag ggttaaatgc taatattggc actttgattt tagtaaatga
      421 agaaaaaaaa gaaggcgatt tttttagaca atttaaaaat ttaaaagaaa ttttgagctt
      481 ttttaaagaa aaggacattt aaatgaaaat agcaatcaca ggtggcgcag gatttatagg
      541 ttcgcaacta gctttaaatt tgcaagaaaa acatgaaatt ttaatcatcg ataaaatgcg
      601 tagtagtgcg acttttgaaa atggaaattt gcaaagtttt gggcatttta aaaatttgct
      661 tgaatttgac ggagaacttt ttgcaggcga tattaatgat gaaaaagttt taaaaaagat
      721 taaggatttt agacctgaaa ttatttttca tcaagcagca atttcagaca ctacggtttt
      781 tgatcaaact aaggttttac aaaccaattt aaatactttt aaagatttta tagaacttag
      841 catagatctt aatgcaaagc ttatttatgc aagttcagct tcagtttatg gcgatgcaaa
      901 aagtccgcaa accgtaggta aagatgaaaa accaaaaaat ccttatgctt tttcaaaatt
      961 gatgatggat aaactagcga aaaaatacta cgataaagcc catttggtag gacttagata
     1021 ttttaatgtt tatggaaaag gcgaatttta taaaaacaaa accgcttcta tggttttgca
     1081 atttggccat caaattttag caggaaaaaa tccatgcttg tttgaaggaa gtgatcaaat
     1141 ttatagagat tttacttata ttaaagatgt tattagtgcc aatttaatcg cccttgattc
     1201 aaaatgcggg gtttataatg taggcagtgg taaagcaaga acttttcaag atatagttga
     1261 tattttgcaa aaagagttaa agactgattt gccttgcgaa tatatcccaa atccttatgt
     1321 aaaatcttat caatttcata ccgaggcaaa actagatcaa acttgggatt atcggccaaa
     1381 attcacttta gaagagggta taaaagatta tttaggcgag ataaaaagac tttttgaaaa
     1441 ggaagtaaat gcttgagttt ttaagtcagc aaaaacctaa aattttaatt ataggggatt
     1501 ttatggtgga taattacact tggtgtgatt gttcgcgtat cagtcctgaa gcccctgttt
     1561 tggtagctaa aacccttaaa gaagataaaa gattaggcgg ggctgcgaat gtttatgcaa
     1621 atttaaaaag cttgggagct gatgtttttg cgctcggtgt tgtgggtgat gataagagtg
     1681 ggaaattttt acaagaaaat ttaaaaggag aatttttgat ccaaaaagga cgcaaaaccc
     1741 cttttaaaaa tcgcattatg gcacacaatc agcaggtttt aagactagat gaagaagaca
     1801 taagtgcaat tttgcttgaa aatgaactta ttgctttgtt tgatgaaaag attaaagact
     1861 ttaaggctgt ggttttaagc gattatgcca aaggtgtttt aacccctaaa gtttgtaagg
     1921 ctgtgataaa aaaagctaag gctttaaata ttcctgtttt agttgatcct aaaggcagtg
     1981 attttagtaa atatagcggt gcaaccttac tcacgcctaa taaaaaagaa gctttagagg
     2041 ctttgaaatt tgaaaattta gagggtgaaa atttagaaaa agggattaaa aaattaaaag
     2101 aagattttgc tttgtgttat tctatcatca ctctttcaga agcggggatc gcactttttg
     2161 atgagggttt aaaaattgca cctgctaaag ctttagaagt ttatgatgta acaggggcgg
     2221 gcgatagtgt gatcgcagtt ttggcttttt gtttggcaag tgggattgaa atttttaaag
     2281 cttgcgaact tgccaatgaa gccgcagctg ttgtagtgag taaaataggt agcatgagtg
     2341 tgagttttga tgagattaag agttttaatc gtgtggattt tgagaaaaaa attaaaagca
     2401 aagaagaact tttaacgctt ttaaaacaaa atgataaaaa gatcgttttt acaaatggtt
     2461 gttttgatat cgtgcatttt ggacatataa aataccttga gaaagctaaa agattgggcg
     2521 atgttttgat tgtgggctta aactcagatg cgagtgtgaa aagactcaaa ggcgagagtc
     2581 gtcctgtaaa ttcagagttt caaagagctt gtatgttggc agctttttat tttgtagatt
     2641 ttgtagtgat ttttgatgaa gacacacctt tagaacttat aagcttttta aaacccgata
     2701 ttttgattaa aggagctgat tataaagata agcttgttgt gggtgcagat atcgtttcaa
     2761 aggttgaatt aatcgacttt gaagaaggat ttagtacgag taagatcata gaaaagatta
     2821 aggataaaaa atgataaatt tagtggaaaa agaatggcaa gagcatcaaa aaatcgctca
     2881 agaaagtgaa attttaaaag gacaaatcgc taaagcagga gagcttttgt gcgagtgtct
     2941 taaaaaaggt ggcaagattt tgatttgtgg aaacggtgga agtgcggctg atgcacagca
     3001 ttttgcagct gaacttagtg ggcgttataa aaaagaacgc aaggctttgg caggtatagc
     3061 gcttacaacc gatacttcag cacttagtgc tataggaaat gactatggtt ttgagtttgt
     3121 tttttcaaga caagtggaag ctttaggaaa tgaaaatgat gttttaatcg gtatttcaac
     3181 gagcggaaaa agccctaatg ttttagaagc ttttaaaaaa gcaaaagaac ttaatatgct
     3241 ttgtttaggg cttagtggaa agggtggtgg aatgatgaat aagctttgtg accataatct
     3301 tgttgtacca agcgatgata cagctagaat tcaagaaatg cacattttaa tcatacacac
     3361 actttgccag attatagatg aaggttttta attttcaaaa attttgattt tttatatact
     3421 ctacaaatgg tgttaagtca aattctttaa ttttcctttc cattgtatta agatatttaa
     3481 ctatattttg ggtatttaaa atatgcgtat tatctcttat ggcattaagt tgcatagagt
     3541 tcatatcagt attgtagtgt gcaggatctt tataattttt tatgttgtca gcgtagtcca
     3601 aatcatcaaa tccatatatt tttacattag gatatttttg agtttcttgt ataatccaac
     3661 ttaaaatagc ataatagttt gaaaatagaa cactatcttt attataatat tccccataac
     3721 tgagttttct atagtttaat cttgaataac ttggtataat aagataaaac tgcgtttttt
     3781 gatatttttt aataaaactt aagagatat
//
LOCUS       DARBAC010000124         3710 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.124, whole genome shotgun sequence.
ACCESSION   DARBAC010000124 DARBAC010000000
VERSION     DARBAC010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.124"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(324..2195)
                     /gene="dnaK"
                     /locus_tag="SB799_001570"
     CDS             complement(324..2195)
                     /gene="dnaK"
                     /locus_tag="SB799_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEG0868794.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
     gene            complement(2218..2748)
                     /gene="grpE"
                     /locus_tag="SB799_001571"
     CDS             complement(2218..2748)
                     /gene="grpE"
                     /locus_tag="SB799_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEG0868795.1"
                     /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNRLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAINVECHDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKEEKEFDPNLHEAMFHVDSQNHQSGEVVTVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            complement(2745..3536)
                     /locus_tag="SB799_001572"
     CDS             complement(2745..3536)
                     /locus_tag="SB799_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HEG0868796.1"
                     /translation="MKSRDKKDLILDSIIQTYLLDNVPIGSNELNLNLCIPASTIRVY
                     LKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWKKEQDQDINIKSENFLKELSKEFE
                     IYCLVYGGRSLVLKEVLDLNAKFIVLDFKEEELVLKYEKEAWNFLQSLIGLDLFSIEK
                     IALRVHFMDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCGVHRYFKESLEF
                     EPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
BASE COUNT         1103 a          725 c          466 g         1416 t
ORIGIN      
        1 atctaaaaag tttttagatt aattttattt tattactaag tttttagttt acttacgcta
       61 aaatgatttg gatgaagtta aattttcttt agaagatttt acaaaaattt tacctacatt
      121 attcaaacca ttttagtaaa agaaatacaa gaaaatgaat tatctgattt taaactggaa
      181 cttcaaaaag aattggttaa aaaatcaatg aaaaattagg tagcaagcta ataaaagaat
      241 tatattttac agattttgtc atttctttaa aattttaaaa aattttcaag ccttttaaaa
      301 aggcttgaat agagatttta ggattactca acttcagcgt cgattacatc gtcatctttt
      361 ttctttttat cattagctgt atttggctca tcttttttat acatattttc agctaactta
      421 tgagaaactt cacttaaagc tttcatttta ctttcaatct cttctttgct tgcattttga
      481 tttttcaaag tctcgcgcaa atcatcaaga gctttttgga tattttcttt atcagcagca
      541 gcaacttttt cacccagctc gcttaaagat ttttctactt gatgcgccaa gctatcagct
      601 gcatttctag catctacagc ttctttgcgt tttttatctt cttctttgtg aagttcagca
      661 tcttttacca tgttattaat ttcttcttcg ctaagtccgc ttgaacctgt gattttgatc
      721 tcttgagcct tacctgttgc tttatctttt gcactaacgg ttaaaatacc atttgcatcg
      781 atatcaaaag taacttcgat ttgtggcata ccgcgtggtg ctggtggaat tccttcaaga
      841 ttgaaatttc ctaaagattt attatcacga ctaaattctc tttccccttg taaaacattg
      901 atagttacag cactttgatt atcctcagcg gttgagaaaa cttgctcttt tttagttgga
      961 atagttgtac ctttttcgat aatcttagtc attaccccac ctagagtttc tatacccaaa
     1021 gagagcggag taacatcaag taaaagcaca tctttaacat cgccttttat aaccgcacct
     1081 tgaatcgccg caccaatagc cacaacttca tctggattta cagacttgtt aagatcttta
     1141 ttaaaggctt ttttcacttc ttcttgcact aaaggaacac gagtagagcc tcctaccata
     1201 acaatttctt taatctcatc ttttttaaga cctgcgtcgc ttactacttc attgatttta
     1261 gtgatggttt cagccactaa agaatcaatc ataccttcaa atttagctct agtaagtttt
     1321 ttaaccaaat gttttggccc acttgcatct gctgtgataa atggtaaatt aatttcagtt
     1381 tcattagctg agcttaattc ttttttagca ttttctgctg cttctttcaa gcgttgtaga
     1441 gccataacat catttttaag atctatgcct gtttcatctt taaattcatt agctagaaaa
     1501 tcaataagtt tattatcaaa atcatcgcca cctaagaaag cattaccacc tgttgctaaa
     1561 acttctacta cattatcacc ggtttcaagc acagtaacgt caaaagttcc cccacctaga
     1621 tcataaacca cgattttttc actatctttt ttatcaagtc cataagctag agctgctgaa
     1681 gtaggctcat tgataattct taatacatta agccctgcta tcgttcctgc ttcttttgtc
     1741 gcttttcttt gtgcatcgtt aaaatatgca ggcacagtaa taactgcatc tacaacactc
     1801 tcgcccaaga aagcttcagc atcttctttt agtttcatta aaacttttgc tgaaatttct
     1861 tgcggagtat aaattttccc tgcgatctca atagcacaag caccatttct ttcagtgata
     1921 tgataaggaa gtctgttttt agcttcttta gccgcgtctt cattgatcat caaacccata
     1981 attcttttaa tagaataaat agttttttca gggttagtta ccgcttggcg ttttgcacta
     2041 tctcctacta aaacctcgcc tttatctgta aaagctacca cagaaggagt tgtattttta
     2101 ccttctttat ttggaattac tttactctca ccgcgttcat acacagcaac acaagaattg
     2161 gttgttccta aatctatacc tataacttta ctcatttttt atccttttta ttaaaattta
     2221 ttttgctaca ctaactttgg ttgggcggat tacgcgatcg gctattttat agcctttttg
     2281 aagcacggta accacttcac cactttgatg attttggcta tctacatgaa acattgcctc
     2341 atgtaaattt ggatcgaact ctttttcttc tttaataaga gccactccat gcttttcaag
     2401 ttttttaaga aacaaatcta aagtgttttg cactccttct ttgattttta agctaatttc
     2461 atcatgacat tcgacattaa tagctgcttc taaagcatcc aaaacatcaa gcaaatcctt
     2521 tgcaaagctt tcatttgcat aagccatagc acttagcttt tctttttcca ttcttttttt
     2581 aatattttca aattcagcgt ttgcacgcat atatttgtct tttaattcat catagtcttt
     2641 ttgcaatctg ttttgctcaa catcttcgat attttgcaaa ttctcatctt gcaaatgttc
     2701 agaattttct gcgttttcat tttcaaattc ttgcttttgc tcgctcacgc cgcctccttt
     2761 atgtattgta atattttttt ataatccgta taaacactac ctgctaagat aatatttaca
     2821 tcttcgccca aaaactgcgc atccacctta agccccataa aaccttcttt aaataaaggt
     2881 tcaaattcaa gactttcttt aaaataacga tgaactccgc aatctaagag cttaacaaat
     2941 tcatcatttt gataaatttg ataagctctt tcttcattgc ttctatagca aatcaaattt
     3001 tgccttaagc tagctatttt ttctacaaga tccataaaat gaaccctcaa agctattttt
     3061 tctatactaa aaagatccaa tcctataaga ctttgtaaaa aattccatgc ttctttttca
     3121 tattttaaaa cgagctcttc ttctttaaaa tcaagcacta taaacttagc atttagatca
     3181 agcacttctt taagcactaa gcttctacca ccataaacaa gacagtaaat ttcaaattct
     3241 ttactcaact cttttaaaaa attctcactt ttgatattga tatcttgatc ttgttctttt
     3301 ttccaaaaac tttgccagta attttgcatt gtcaaaatag taggaattct accactactt
     3361 atatgaagct gagtgatcaa accctcgtcg ctaagccttt taagatagac gcgtatagtt
     3421 gaagcaggga tgcaaagatt taaattcaat tcatttgaac caataggaac attatctaaa
     3481 agataagttt ggatgataga atctaaaatc aaatcctttt tatctcggct tttcatagct
     3541 ctttccttaa atttttagca ctctattttt tgattgctag aagtattata caacattgag
     3601 tgttattttg tcaagtataa atataaaaaa atatacttaa ttttatttag tctatatgac
     3661 taaactttta ttagttgctt ttttataaga atacaatata tcaatatatc
//
LOCUS       DARBAC010000125         3689 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.125, whole genome shotgun sequence.
ACCESSION   DARBAC010000125 DARBAC010000000
VERSION     DARBAC010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.125"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            115..1656
                     /gene="cueO"
                     /locus_tag="SB799_001573"
     CDS             115..1656
                     /gene="cueO"
                     /locus_tag="SB799_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HEG0868797.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     KERIYRFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEEPNTLFLANISLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            1658..1879
                     /locus_tag="SB799_001574"
     CDS             1658..1879
                     /locus_tag="SB799_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEG0868798.1"
                     /translation="MIKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDENTKLKDGDKIALLPPVCGG"
     gene            1880..2326
                     /locus_tag="SB799_001575"
     CDS             1880..2326
                     /locus_tag="SB799_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEG0868799.1"
                     /translation="MKHFTLYQGSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFDEWQKRVDFDDISLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            2330..3520
                     /locus_tag="SB799_001576"
     CDS             2330..3520
                     /locus_tag="SB799_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEG0868800.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAEL
                     GFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDI
                     IFMP"
BASE COUNT         1387 a          549 c          637 g         1116 t
ORIGIN      
        1 ttgattaaat tgctaaaatc ataacaaaat taaatcaaat tttcaaaata aatatttact
       61 aaaactaaaa aaataatgac tataatacaa aaaatcaagc aaaaggaaaa actaatgaat
      121 agaagaaatt ttttaaaatt taatgcactt actctagcaa gtatgggtgt agcctatgca
      181 aatcctatgc acgatatgca ctctatgcat aaaaatcatt ctataaatca tgacttagat
      241 acttctttta tcaactttgc tccaaaaaat ttaaaacttt tagatccaaa acaattcccc
      301 caaggagaaa ttttaaaagc cttgcctttg ctcaaaaatg aaagtaaaga aaaaaatatt
      361 tttcgtgcta ccctagaaat caaagaaaat catatagagc ttatcaaagg taaaaaaacc
      421 ttattttata cttacaatgg tctagtacct gctccaaaaa tagaagtttt tgaaggagat
      481 aaacttgaaa ttttagtcaa aaacaaactc aaggaagcta caactataca ttggcatggc
      541 gttcctgtgc cacctgatca agatggaagc ccacatgatc ctatcttagc aggaaaagaa
      601 agaatatatc gttttgaaat tcctcaagat agcgcaggaa cttactggta tcatccacac
      661 cctcattata ccacttctaa acaagttttt atgggcttag caggggcttt tgtgatcaaa
      721 gcaaaaaaag atgctttaag tcatttaaaa gaaaaagatt tgatgattag cgatttgcgt
      781 cttgatgaaa acgctcaaat tccgaacaac aacctaaatg attggctaaa tggtagagaa
      841 ggagaatttg tactcattaa tggacaattt aaacctaaaa tcaaactcgc cacaaacgaa
      901 cgcatacgca tttataatgc tactgcagca agatatttaa atttacgcat acaaggagct
      961 aagtttatac ttgttggtac tgatggtgga cttatagaaa aagctattta taaagaagaa
     1021 cttttcttaa gtcctgcttc tcgcgtagaa gttttaatcg acgctccaaa agatgggaat
     1081 tttaagctag aaagtgctta ttatgatagg gataaaatga tggtaaaaga agaacctaat
     1141 accctatttt tagctaatat tagtctaaaa aaagaaaatg tagaacttcc aaaaaattta
     1201 aaaattttca aaccttcaga agaacctaag gaatttaaag aaataatcat gagtgaagat
     1261 catatgcaaa tgcatggtat gatgggaaaa agtgaaagcg aattaaaaat cgctcttgcg
     1321 tctatgtttt taatcaatgg caaaagctat gatttaaaac gcattgattt aagctccaaa
     1381 cttggagtag ttgaagactg gatagtgata aacaaatctc acatggatca tcctttccac
     1441 atacacggca cgcaatttga actcatctca tcaaaactca atggcaaagt tcaaaaagcc
     1501 gaatttagag ccttaagaga tactataaat gtgcgtccta atgaagagtt aagacttaga
     1561 atgaaacaag attttaaagg acttagaatg tatcattgtc atattttaga acatgaagat
     1621 ttaggaatga tgggaaattt agaagtaaag gaataaaatg ataaaagtgg aatttttagg
     1681 ccccataaat aaagaaaatt tagagcttga ggtaaaaaat ttaaaagaat taaaagaaat
     1741 tttgcaaaaa gatgagagtt taaaagaatg gctagaactt tgtgccgtat ctttaaacga
     1801 tgaaatcatt tttgatgaaa acactaagtt aaaagatggt gataaaatag cacttttacc
     1861 gccagtttgt gggggttaaa tgaaacattt tacactctat caaggttctt tagatattcc
     1921 taaaatttat agccaatggt atgaatttgc caaggataaa aactgcggtg ctttgctgac
     1981 tttttgtggt attgtgcgtg aagaaggagg cattgaggca cttagttttg atatttatga
     2041 accgctttta aaaaaatggt ttgatgagtg gcaaaaaaga gtagattttg atgatattag
     2101 cttgcttttt gctcactcta taggcgatgt ggcggttcat gaaagctctt attttgcagg
     2161 aattttaagc aaacaaagaa aattaggact taaacttctt aatgaatttg ttgaagattt
     2221 taaagcaagt gcacctattt ggaagtatga tgtgataaac aaagaaagaa tttatgccaa
     2281 agaaagatca accaaacttt gcggtgcagg acttttaaaa ggataaaaaa tgttaatgtc
     2341 ttatgaagaa agtttaaaaa ttttacactc tcatatcaaa acttatgaaa agattgaaaa
     2401 aatagctctt acagagtgtt taggacgcat tttagctcaa gacataaaag cccctaaaaa
     2461 tcagcctgaa tttccaactt cggctatgga tggttatgcg atcaaatttg aagatcaaga
     2521 taagccttta aaaattttag gcctcacacc tgcaggcact atgccacaat ttagcgtgca
     2581 aaatggtact tgtgtaaaaa cctttacagg ttcacttatg agtgaaggaa gtgatacttt
     2641 agtccctgtt gaaaatgtac gcgtagaaaa tgatactctt tttatagaaa aaaaagttcc
     2701 ccaagctttt gccgtgcgtg cagtaggaga aaactataaa aaagatgaaa ttttactcaa
     2761 aaaaggcaca aagttaaatt atagcgaaat agctcttttg gctgaacttg gattttttca
     2821 cattagtgtg tttataaagc ctattgtagg ggttttaagt agtggaagtg agatcaaaga
     2881 tctaggagaa gccttggaaa atcctgctca aatccgctct tcaaatcata tcgccatagc
     2941 taatttagct aaaaatttaa attgcgatac aagggttttt ccacttttaa aagatgatga
     3001 aaaagccact ttttctaccc ttgaaagtgc tttgcaaagt tgtgatattt tgattacaac
     3061 aggcggagtt tctatgggag attttgactt tttaaaaaaa gctgtaaaag aatacgaaat
     3121 catcatcgat aaagccgaca taaaaccagg tagacatatc aaaatagcca aggctaatga
     3181 aaaattcatc atcgccttac caggttttcc ttactcggct atggtaatgt ttaatcttta
     3241 cgcaagagag attttaaact cttggttact tcagcctaaa gactatattt gcaaagcctt
     3301 tttacaagga agctacaaga aaaaaacacc ttatttggaa tttgtcgctt gtaatgtgga
     3361 atttaaaaat ggacgcattt tagccaatct tgaaggtaag aaagaaggct ctagtgcgat
     3421 tataaacaat cttaacaata aagctgccct tatggtagta ccaaaagaat gtgaaatttt
     3481 agaaaatgaa agtttagtag atattatctt tatgccttaa aattatttaa ataattttat
     3541 ttcgatttta atcaacccta aatttcaata agtttcaaat ttgcacctcc ttttagtgaa
     3601 gtaattagcc ctagcagagt ttcaatccac tagggttttt agtccctttt taaatttctt
     3661 tatggtaaaa tgctttagga aatgcttta
//
LOCUS       DARBAC010000126         3676 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.126, whole genome shotgun sequence.
ACCESSION   DARBAC010000126 DARBAC010000000
VERSION     DARBAC010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.126"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..583
                     /locus_tag="SB799_001577"
     CDS             <1..583
                     /locus_tag="SB799_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEG0868801.1"
                     /translation="ANLEIKNNKIYAKPKEKLIIFASTHKDEEELLLDHFKLEENEKL
                     IIAPRHPERFKEVENLLLNKGLEFEKFSSLKDENKKFAKKILLLDALGELVNFYAISD
                     VVVLGGSFIEGIGGHNPIEVAYFDNVLISGKFIHNQKALFEEVENVYFCENLKDLNDK
                     IHYLNLKVKISKKENLDLIIQTIQKGIDARKSL"
     gene            564..1316
                     /locus_tag="SB799_001578"
     CDS             564..1316
                     /locus_tag="SB799_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEG0868802.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSHGKKVVVARALMS
                     DKARFNVIKTKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKAKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFDYYFKAELDNSFAKVGFEIKNLDF"
     gene            1384..2721
                     /gene="ffh"
                     /locus_tag="SB799_001579"
     CDS             1384..2721
                     /gene="ffh"
                     /locus_tag="SB799_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEG0868803.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDVKQNGIGQKQFLNAIKVNLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMNELKAVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEALDISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIRIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            2786..3013
                     /gene="rpsP"
                     /locus_tag="SB799_001580"
     CDS             2786..3013
                     /gene="rpsP"
                     /locus_tag="SB799_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEG0868804.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            3016..3258
                     /locus_tag="SB799_001581"
     CDS             3016..3258
                     /locus_tag="SB799_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEG0868805.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            3251..>3676
                     /gene="rimM"
                     /locus_tag="SB799_001582"
     CDS             3251..>3676
                     /gene="rimM"
                     /locus_tag="SB799_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HEG0868806.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNASNSTVLFENYEDIEKAKELINLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVIDILETGASYLFEIQSDEKWVEKK"
BASE COUNT         1396 a          392 c          714 g         1174 t
ORIGIN      
        1 ggcaaattta gaaattaaaa ataataaaat ttatgccaaa cctaaggaaa agcttatcat
       61 ttttgctagt acgcataaag atgaagaaga gcttttgctt gatcatttta aactagaaga
      121 aaatgaaaaa ctcattatcg ccccacgaca ccctgagcgt tttaaagaag ttgaaaattt
      181 gcttttaaac aaaggtttgg aatttgaaaa atttagttct ttaaaagatg aaaataagaa
      241 atttgctaaa aaaattttgc ttttagatgc tttaggagag cttgtaaatt tttatgcaat
      301 ttctgatgtt gttgtgcttg gaggttcttt catagaaggc ataggaggac acaatcctat
      361 agaagtggca tattttgaca atgtattaat cagtgggaaa tttattcata atcaaaaggc
      421 tttatttgaa gaagtagaaa atgtatattt ttgcgaaaat ttaaaagatt taaatgataa
      481 aattcattat ttaaatttaa aagttaaaat ttccaaaaaa gaaaatttag atcttattat
      541 acagaccata caaaagggaa ttgatgcaag aaaaagctta taaactctta gctttgcaag
      601 aaaaaatttc aaatcgtgaa gctaaagatt tgattgataa gggttgtgtt ttttcgcatg
      661 gaaaaaaagt tgtggttgct agagctttga tgagcgataa ggcaagattt aatgtgataa
      721 aaaccaaaaa tcctcaaatt atttttgaag atgataagat tattgctatt aataaacctt
      781 atgcttatgt gagtgaagac ttggagaaaa aatttaatgc caagctttta aatcgtttag
      841 acaaagaaac aagcggtgtg attttgcttt gcaaagatga agattttaga aagctttgta
      901 tagaagaatt taaaaaacat agagtttata aaagttatat tgcggtttta gatggggttt
      961 tggctgaaga ggttgaagtg aatgagccta tttttaccat aaaagcaaaa ggcggggcgt
     1021 taagtaaagt ttcaaaagat ggtttaagtg ccttaagcat cattactcct attatgatgc
     1081 agtcaaaaaa aaccttagca aaaatagtca ttcaaacagg tagaactcat caaatcagag
     1141 tgcatgctaa atttataaaa catggcgttg taggtgatga aaaatatgct aaaatttcaa
     1201 gcgatagaat gtatttacat agttatgaaa ttaaaatttt tgattattat tttaaggctg
     1261 agctagataa tagttttgca aaagttggct ttgagataaa aaatttagat ttttaaagcc
     1321 atttaagaaa aaattttgta taatgcaagg tttaatttaa aaattttata gaaaggtgat
     1381 aaagtgtttg agttagttag cgaatctttt aaatcagcga ttaataaatt acgttttgtt
     1441 gatgatgaaa aagcacttaa gaacgcttta gaaaccttaa aaaaagctct tttaaaagca
     1501 gatgttcacc ataaggtaac taaagagctt ttgactttga tagaagaaga tgtaaagcaa
     1561 aacggaatag gtcaaaaaca atttttaaat gccattaaag taaatttaga aaatatttta
     1621 agtgtcaatg gcaaaaatca aggttttgtt tttgcttcta aacccccaac agtagttcta
     1681 atggcaggtt tacaaggggg cggtaagact acaagcacta ttaaacttgc aaattattta
     1741 aaattacgca ataaaaaagt tttagttgca gcttgtgatt tacagcgttt agcagcagtg
     1801 gagcagctaa gacaactttg tgaagctaat gaaattgaac ttttcttcat agaaaatgaa
     1861 aaagatccta ttagagttgc taaagaggct ttaaaaaagg ctgaaagttc tatggtggat
     1921 gttttgcttg tggatactgc tggacgtttg gctatagatg aagctttgat gaatgaatta
     1981 aaagcagtta aggatgtttt aaatcctgat gagattttct atgttgctga tgcaatgagt
     2041 ggtcaagatg gggtcaagac tgcggctagt tttaatgaag ctttggatat cagcggggta
     2101 attttatcaa aatttgatgc agatactaaa ggtggagtag ccttaggtat agcaaaacaa
     2161 atcggtattc ctttaagatt tattggtgtg ggtgaaaaag tagcagattt agaagttttt
     2221 ataccagatc gtatagtaag tcgtattatg ggtgagggtg atttggcaac tttagctgaa
     2281 aaaactgctg cgattattga tgaaaaagag gctaaaaaac tcaatcaaaa aattaaaaaa
     2341 ggtgaattta attttaatga ttttcttaat caaatggaaa gtattaaaaa attaggaagc
     2401 atgaagtctt taatcggcat gataccagga cttggcggaa tggcaaatgc ggtaaaagat
     2461 atagatttgg ataattctaa agaaatcata cgcattaaag caatgatttc ttcaatgact
     2521 ccaaaagaaa gagaaaatcc tgatttatta aataatgcta gaaagcgtcg tatagcagag
     2581 ggagcaggtc tttctcaggt agaagtcaat cgttttttaa aacaatttag caatgcagca
     2641 aagcttgcaa aaagattttc aggtaaaaaa ggaatggaaa gtttaacaca gatgatgagt
     2701 caagctagaa ggcaatttta aattttattt ataaatactt tttatagtat ctataaataa
     2761 aatttttaat ttttaaggag tataaatgac agttattaga cttacaagaa tgggtagaac
     2821 taaaagacca ttttatcgta ttgtagttac agacagtaga aaacgtcgtg atggtggttg
     2881 gatagaaagt attgggtatt ataatcctat ggtagaacct gaggtaatta aagttgatgc
     2941 agagcgttta gcttattgga aaagtgttgg tgcaaaactt agcgataaag ttgcttctat
     3001 cactagcaaa taatcatggt agagaatttt cttagagaat acgcaaaatt aattgcagat
     3061 tatcctgaac agattgatac tcaaaaaatt gaattaagtg aaaatttttt tgagattgtt
     3121 ctttttgcac ataaggttga tacaggtaag cttataggta aaaatggaaa aatgatcaat
     3181 gctataaaaa ccgtaatctc tgcttataag agcaaggatg caagttctta tagagtaacg
     3241 gtaaaagcac ttgagtgaaa aagattttgt tcaagttgca aaacttggta aaactgtggg
     3301 tcttaagggt tatgtaaaat tgcataacct gagcgacttt tcttctcaat ttaaaaaaga
     3361 tgctactttt tttataaaaa acaccaaaga aatgttaaag attaagcatt ataatgcaag
     3421 caattctact gttttatttg aaaattatga agatatagaa aaggccaaag aattaattaa
     3481 tcttattctt tttcagagta tcgagaaaag cagacaaact tgtaaattaa aaaaagatga
     3541 gtttttttat tttgatattt tagagtgtga agtttttgaa gaagataaaa gattaggtaa
     3601 agtgattgat atcttggaaa ctggagcttc ttatttattt gaaattcaaa gtgatgaaaa
     3661 atgggttgaa aaaaaa
//
LOCUS       DARBAC010000127         3606 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.127, whole genome shotgun sequence.
ACCESSION   DARBAC010000127 DARBAC010000000
VERSION     DARBAC010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.127"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            77..193
                     /locus_tag="SB799_001583"
     CDS             77..193
                     /locus_tag="SB799_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868807.1"
                     /translation="MSMKKIILFLLCVGFAFACSEHSHTDFKDLNKTEYNSQ"
     gene            204..1208
                     /locus_tag="SB799_001584"
     CDS             204..1208
                     /locus_tag="SB799_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HEG0868808.1"
                     /translation="MKKIFFMFLTAFSFLGASELNIYSARHYDADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLDNLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
                     "
     gene            1208..2824
                     /locus_tag="SB799_001585"
     CDS             1208..2824
                     /locus_tag="SB799_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEG0868809.1"
                     /translation="MYKTLKYYKLGAILLALFLVLPIFGIFAELFYILFQNFNTSDLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISVGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALVTALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKIFHMSLLGNSLLVLVFAYVIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            2808..>3606
                     /locus_tag="SB799_001586"
     CDS             2808..>3606
                     /locus_tag="SB799_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEG0868810.1"
                     /translation="MMLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAIARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKIIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEKKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFL"
BASE COUNT         1217 a          412 c          581 g         1396 t
ORIGIN      
        1 tataaaaata taaagattac gtcatattta ctttttaata ttaatatttc ttatcaaaat
       61 atctaaaaag gaattaatgt ctatgaaaaa aataatttta tttttactat gcgttggctt
      121 tgcttttgct tgctctgaac attctcatac tgattttaaa gatcttaata aaaccgagta
      181 taattctcaa taaaggataa aatatgaaaa aaatcttctt tatgttttta acagcttttt
      241 catttttagg tgctagtgag cttaatattt actcagcaag acattatgat gctgattttg
      301 aaatcatcaa aaaattcgaa gaaaaaacag gcattaaggt taatcatact caagccaaag
      361 cttcagaact tattaaaagg ctttctcttg aaggaagtaa ttctcctgct gatattttca
      421 tcacagctga tatttcaaat cttacagaag ctaaaaattt aggactttta tcccctgttt
      481 catcaaaata tttagaagaa tttatacctg ctcatttaag ggataaggat aaggaatggt
      541 ttgcgatcac aaaaagagca agaattattg cttataataa aaacgcaaat attgacatta
      601 gcaaaatgaa aaattatgaa gatttagcaa aagctgaatt taaaggagaa attgttatga
      661 gaagtgctac agctccttat agcaaaactc ttttagcatc tattatagct aatgacggaa
      721 ataaagaggc taaagcatgg gctaaaggtg tgcttgacaa tcttgcgaca aatccaaagg
      781 gtggagatag agatcaagcc agacaagtat ttgcaggcga agctaaattt gcagttatga
      841 atacttatta tatagggctt ttaaagaatt ctaaaaatcc aaaagatgta gaagtgggga
      901 attctttggg tattattttt cctaatcaag acaatagagg aacgcatatt aacattagcg
      961 gtattgctat gacaaaatca agtaaaaatc aagatgcggc taaaaaattt atggaattta
     1021 tgttaagtcc tgaaattcaa aaaattctta ctgatagtaa ttatgaattt cctataagaa
     1081 atgatgtaga attaagccaa acggtaaaag attttggaac tttcaaagaa gatcaaattc
     1141 ctgtgagtaa gatagcagaa aatattaaag aagctgttaa aatttacgat gaagtcggtt
     1201 ttagataatg tataaaaccc taaaatacta taaactcggg gcaattttac ttgccctttt
     1261 tcttgttttg cctatttttg gtatttttgc tgaacttttt tatattttat ttcaaaattt
     1321 taatacaagt gatttaaccc aattttcatc tattaaagaa aatttgagtc atttttttga
     1381 ttatttattt ttaaaattca tcaaagatac ttttataatt agcgtgggag tattgtgttt
     1441 aagcttgatt ttgggtgtga gttctgctta tttgatcgca aattatgatt tttatttctg
     1501 taaaatttta gaaaaattac tcattttacc cttggccata cctgcttata ttttagcctt
     1561 tgtttatgtg ggaattatgg attttcaagg attttttcat gaaaattttg gctttaggat
     1621 agattttttc aatcattatg gtgttatttt tgttttggct atttctttat atccttatat
     1681 ttatttattt gctaaaacag cttttaaaag tgaagctaaa gaggcttatg aagtagctaa
     1741 aatcatgaaa tattccgaat ttagaatttt tacacgcgtg gcacttttga gtgcaagacc
     1801 tgccattttt tctggagctt tattggtttt aatggaaact ttgagtgatt atggtgcaag
     1861 tgcttatttg ggagtagata ctttttcggc tggaattttt aaactctggt atgatttgaa
     1921 tgattcttat tcttctagtg ttttatcggg tattttaatg ctttttgtat ttttgattat
     1981 gtatgtggat tattattata aaaataaaca tcattatagt tttaatcaaa atttagctct
     2041 ttttatcaaa aaaagaaaat taaatcctat taaacaaatt ctatcctgta tttattgttt
     2101 tatgattgct tttgtaggtt ttattttacc ttttatttgg ctagtttatt gggggttaaa
     2161 agatcataag ctttttgaat cacaatttta tattatcagt tttcaaacta taatcttagc
     2221 tttagtcact gctttaatta ccactttttt agcttatttt ttgatgttta gttctaggat
     2281 agttaaaaat cattttttta atttatttat tttaaaaata agttctttgg gttattctat
     2341 acctgctgct gctttaggga ttagcattat agtgcttttt gtatttttgg ataaaatttt
     2401 tcatatgagt ttattaggaa attctttact tgttcttgtt tttgcttatg taattcgttt
     2461 tttagcgagt gcaatttatt ctttagaagg aggttataat aaaattcatc taaatattga
     2521 tgaggcaagt ttaaatttaa gaacgagtta ttttatttta ttttttaaaa ttcacacacc
     2581 tttaatgaaa cattttttat ttttggcttt tattattgtt tttattgata cgattaaaga
     2641 acttccttta agtagaattt tagcgccttt tggctttgaa actttaagtg ttaaagcttt
     2701 ctggtttgca agtgatgaaa gaatttatga tgcagctttg ccttccttgt ttatcgtttt
     2761 tctttcttta atggttgttg tttggatgga taaaatcaca aggaaagatg atgttagaaa
     2821 ttaaaaattt atctaaaaat tttggaaaaa tacaagcttt agaaaatatc aatcttcatg
     2881 tcaaagaagg agaattttta agcattttag gaggtagtgg aagcggaaaa agcacgcttt
     2941 taaggattat tgctaagctt gaacaagcta gttcttatga tttgttttct tgcaaaggtg
     3001 aagtggcttt gatgtttcaa aattatgctt tatttcctca tttaaatgtt gagaaaaaca
     3061 tactttttgc actttacgat aaaaaagata aaaatcaaat tttaaatcat ttgcttaaaa
     3121 cttttgaaat tgaagattta agatataaaa aaatcgatga aatttcagga gggcaagcgc
     3181 aaagagtggc ttttgctaga gctatagcaa gaggatgtaa gcttttgctt ttagatgaac
     3241 ctttttctaa tttggatcaa aatttaaaac aggatttaag aagagaattg aaaaaaataa
     3301 tagaaaatca aggtattacg gctattatgg taactcatga tattgaagat gcttattgta
     3361 tgtctgatca aatcgctttt ttagaaaaag gaaaaatttt agctcatgca aatcctaaag
     3421 agctttattt taagcctgat tttaaaagtg cgcaaatttt acctgattta aatatcatag
     3481 aaaaaaaact tgatttagaa gatgaatttt ttgcttggat agcttcaaaa aattatattt
     3541 ttggttatgc agaacttaaa ataggaaatc gctttgaggc taaaatttta caaaaagaat
     3601 ttttag
//
LOCUS       DARBAC010000128         3174 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.128, whole genome shotgun sequence.
ACCESSION   DARBAC010000128 DARBAC010000000
VERSION     DARBAC010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.128"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            12..1103
                     /gene="dnaJ"
                     /locus_tag="SB799_001587"
     CDS             12..1103
                     /gene="dnaJ"
                     /locus_tag="SB799_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002859317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEG0868811.1"
                     /translation="MTQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYE
                     VLSNDEKRAIYDRYGKDALKGGGFGSSSSGFGGFEDLGDIFSSFFGEGFGSSRRRKSS
                     NDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGKLQTCPKCQGR
                     GQVGVSQGFITFAQTCPDCQGIGEKASEKCSDCKGLGYNESKDSVELNIPEGVDTGMK
                     LRVNAKGNILKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQAILGESIKVPT
                     IRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRMGNQIVQISIKFPTSLNDEQKELLE
                     KLSESFGIKDGMHQEQKGLFEKITNWFKS"
     gene            complement(1218..2492)
                     /gene="porA"
                     /locus_tag="SB799_001588"
     CDS             complement(1218..2492)
                     /gene="porA"
                     /locus_tag="SB799_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 major outer membrane porin protein PorA"
                     /protein_id="HEG0868812.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDVDVSGVLRYRYDT
                     GNFDKNFVNNSNLNNSKQDHKYRAQVNFSAAISDNFKAFVQFDYNAADGGYGANGIKN
                     DQKGLFVRQLYLTYTNEDVATSVIAGKQQLNLIWTDNAIDGLVGTGVKVVNNSIDGLT
                     LAAFAVDSFMAAEQGADLLGHSNISTTSNQAPFKVDSVGNLYGAAAVGSYDLAGGQFN
                     PQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDKTHANGNLFA
                     LKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEIFYTTGSRLNGDTG
                     RNIFGYVTGGYTFNETVRVGADFVYGGTKTEAANHLGGGKKLEAVARVDYKYSPKLNF
                     SAFYSYVNLDQGVNTNESADHSTVRLQALYKF"
     gene            complement(2744..3151)
                     /locus_tag="SB799_001589"
     CDS             complement(2744..3151)
                     /locus_tag="SB799_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEG0868813.1"
                     /translation="MAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLA
                     QLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTNTQNKVLKITDFSPSLN
                     YDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
BASE COUNT         1068 a          500 c          578 g         1028 t
ORIGIN      
        1 aaattcttga aatcacgcaa aatgctgata aagaaaccat aaaaaaagcc tatagaaaaa
       61 tggctttaaa atatcatcct gatagaaacc aaggtgataa agaagcagaa gataaattca
      121 agcttgttaa tgaagcctat gaagttttaa gcaatgatga aaagcgagct atttatgata
      181 gatacggaaa agatgcttta aaaggcggtg gatttggttc tagtagctca ggttttggtg
      241 gttttgagga tttaggagat atattttcta gtttttttgg agaaggcttt ggctcatcgc
      301 gtcgtagaaa aagttcaaat gatgagaaaa tcccttcaga ttttatcgtt aatttaaaat
      361 taagttttaa agaagcggtt tttggttgta agaaaaatat agactttact tataaatgct
      421 cttgtaaaac ttgtaatgga acaggggcta aagatggaaa gcttcaaact tgtccaaagt
      481 gtcaaggtag aggacaggtt ggggtttctc aaggttttat cacttttgca caaacttgcc
      541 ctgattgtca aggaattgga gaaaaagcta gtgaaaaatg tagtgattgt aaaggtttgg
      601 gttataatga aagcaaagat agtgtcgagc ttaatatccc agaaggtgta gatacaggta
      661 tgaagcttcg tgtcaatgct aaaggtaata tcttaaaaaa tggtactaga ggggatatgt
      721 atgttaagat catcgccgct gaagatgata cttttatcag agatgatgat gatatatata
      781 tagaatttcc agtgtttttt actcaagcta tcttaggaga gagtataaaa gtacccacca
      841 tacgcggtga agcgacctta aatttaccaa agggtgctaa agatggacaa agatttgttc
      901 ttgaaaaaga aggggtaaaa gatgttcata gttctcgcat gggaaatcaa atcgttcaaa
      961 tttctatcaa attcccaact tctttaaacg atgaacaaaa agaactttta gaaaaactaa
     1021 gtgaaagttt tggcatcaaa gatggtatgc atcaagagca aaaagggctt tttgaaaaaa
     1081 tcactaattg gtttaagtct taattttcct aaagcgtttt agcttgggaa aattttttat
     1141 ataaatttaa gttttaaaaa tcaggcataa aaaaaggcgg agcaaaaccc cgccttgaag
     1201 ttagacttga aagcttctta gaatttgtaa agagcttgaa gtcttacagt gctatgatca
     1261 gcactttcat tagtgtttac accttgatct aggttcacat aagaatagaa tgctgagaag
     1321 ttaagttttg gagagtattt gtaatctact cttgcaacag cttcaagttt tttaccacca
     1381 cctaaatgat tagcagcttc tgtttttgtt ccaccatata cgaagtcagc accaacgcga
     1441 actgtttcgt tgaaagtata tccaccagtt acataaccga agatatttct accagtatca
     1501 ccatttagtc ttgaaccagt agtatagaaa atttcctcac ctgcaagtaa agaaccaaga
     1561 ttaccttgat cttcgattac aactgtagaa gctttttctt tatcaccgta gtataaacca
     1621 ccaaggctag catcccaacc atttacttca atgctacctt ttaaagcaaa taaattgcca
     1681 ttagcgtgtg ttttatcatc aagttcgcta tcaaggctat ttcctaagta agcaccttca
     1741 agtgtccagt tgattccatc aaagatagtt gtactataag ctgcatctac agcatagaag
     1801 aatgctactt gatcccaata agctaaccat aattgtgggt tgaattgtcc accagcaaga
     1861 tcataagaac ctacagcagc agcaccgtaa agatttccta ctgaatctac tttaaaagga
     1921 gcttgatttg atgttgttga aatattacta tgtcctaata aatctgcacc ttgctctgca
     1981 gccatgaagc tatctacagc aaaagcagct agagttaaac catcgatgct gttatttact
     2041 actttaacac ctgtgccaac taaaccatca atagcgttat ccgtccagat aaggtttaat
     2101 tgttgtttac cagcgattac acttgtagca acatcttcat ttgtataagt taagtataat
     2161 tgacgaacaa aaagtccttt ttgatcattt tttattccat tagcaccata accaccatca
     2221 gcagcattat agtcaaattg aacaaaagct ttgaagttat cagatatagc agcactgaag
     2281 ttaacttgtg ctctatattt gtgatcttgt ttgctgttgt ttaaatttga gttgttaacg
     2341 aaatttttat caaaattacc tgtatcgtat ctgtatctta atacacctga tacatcaaca
     2401 tctttgatcg cttcttcaag tggagtagcg ttagctgctg aaaaagcacc tgcagcaaga
     2461 gctgcaacta aactaagttt aactagtttc atgagaattc tccttgtcaa aaattaataa
     2521 aacatcgtaa ttgtagcaca taaatttgga gttttttctt aagaagcact taaaatagta
     2581 aaaattttaa atccgaagga taaaaacatc taaagaaaag cctagctaaa gggatttaag
     2641 ctaggcgtgt aattttaagg agtttttctt atgaatgttt ttcggttcgt ttagaagtat
     2701 aagcctaaaa agtaaacgag aagtaatata tagttgtttt aaattatttt gataaaaaaa
     2761 caagtaaatt tttacaagct agggataaaa ttttataagt ttcatcaaaa ttcccactat
     2821 accaaggatc aggaacttca tcgtagttta gactaggact aaaatcagtg atttttaaaa
     2881 ctttgttttg ggtgttggtg aagtttttta aaacattttt gaagttagaa ttgtccatgg
     2941 tgattaaaaa atcgctttca tcgcaaagct tttgagtgag ttttttgctt gtgaagtttt
     3001 tgtgttctat gttaagttga gcaagcttgt ttttggtgcc atagtgcata ccttctccat
     3061 cgtgttctcc tgaagttcca gcactgttta taaaaaattc tttttctaaa tttgcttttt
     3121 tgacaagatc tttcatgata aattctgcca taggcgaacg gcatatattg ccta
//
LOCUS       DARBAC010000129         3081 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.129, whole genome shotgun sequence.
ACCESSION   DARBAC010000129 DARBAC010000000
VERSION     DARBAC010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.129"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1915
                     /gene="ccsA"
                     /locus_tag="SB799_001590"
     CDS             <1..1915
                     /gene="ccsA"
                     /locus_tag="SB799_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEG0868814.1"
                     /translation="GYRFYQSSYDQDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNF
                     LNPHSRFRTLARLINKDTLKHASVIIFILLLSFGSEKTFAQDLNLTLPVVNTNHAKAL
                     ATLIVQKSADGRMVPFDTLSREILEKIHQSDSYKGQNSNAVMLSMLVDVDKWQMEPFI
                     LMPQNQAVRDAIANILEIPSTKYISYKDFFDENNRYKLQKYVENANRKNPNARGVFDK
                     EIIKLDERANVVNLVFSGELFKFIPVQNNPNNVWLAPFSAVTTLKGDEGHIVLALIQN
                     YFSAVENAFKDGNWTRADEGLKFIKEYQEKIGYKVMPSKTKVEMEIFSNKAEIFVKLA
                     PVYLIAGFLLLILVFSKMVVPNLKISFIFKVVYVLNVLAFVIHTVGLGLRAYLSGHAP
                     WSNGYESMVYIAWALSLSGIFFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVP
                     VLNSYWLSIHVSVITASYGFLGLCALLGIFTLFLMCFLKKDGKYNLNILRNITEATRI
                     NEMAMIFGLCLLTVGNFLGAIWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPK
                     YCNQFVFALWSMFAYWVIIMTYFGVNYFLTGLHSYAAGEAAQIPNYVYWGFALMVVLA
                     LFARRKRNFVGKL"
     gene            1931..2380
                     /locus_tag="SB799_001591"
     CDS             1931..2380
                     /locus_tag="SB799_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868815.1"
                     /translation="MVIFCAALALLLFLGMIAYLITSDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEATKKKLEFVSA
                     LAANINASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(2383..2459)
                     /locus_tag="SB799_001592"
     tRNA            complement(2383..2459)
                     /locus_tag="SB799_001592"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2423..2425),aa:Arg,seq:gcg)
     gene            complement(2512..>3081)
                     /locus_tag="SB799_001593"
     CDS             complement(2512..>3081)
                     /locus_tag="SB799_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEG0868816.1"
                     /translation="IKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFYKKSFVLRQ
                     KINKNLKQINLLSEAFNLLLSEQTQYKKHLKILNLSISILSKNTKEHLVRVDTLYTLT
                     SAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLYIFSLICCI
                     LIVGFIFYHSKKTKEFDLDEGKKAKKQTK"
BASE COUNT         1034 a          379 c          527 g         1141 t
ORIGIN      
        1 tggctataga ttttatcaaa gttcttatga tcaagatgaa aaagggactg ttttatctgt
       61 aaataaagat ccaggtaaaa taccaactta tataggttat tttttgcttt gtcttggaat
      121 gtttatgaat tttttaaatc cacattctag atttagaact ttggcaagat taattaataa
      181 agacacttta aaacatgcaa gtgtgattat ttttatttta ttgctatctt ttggttctga
      241 aaagactttt gctcaagatt taaatttgac cttacctgtg gtaaatacta atcatgctaa
      301 agctcttgct actttaatag ttcaaaaatc agcagatgga agaatggtgc cttttgatac
      361 gctatcaaga gaaattttag aaaaaattca tcaaagtgat agctataagg gtcaaaattc
      421 taacgctgtt atgctttcca tgctcgttga tgtagataaa tggcaaatgg aaccttttat
      481 tttaatgcca caaaatcaag cagttcgtga tgctattgca aatattttag aaattcctag
      541 cactaaatat atttcttata aagatttctt tgatgagaat aaccgatata aacttcaaaa
      601 atatgttgaa aatgcaaatc gtaaaaaccc aaatgcaaga ggagtttttg ataaggaaat
      661 tataaaacta gatgaaagag ctaatgttgt aaatttagtt tttagtggtg aattatttaa
      721 atttattcct gttcaaaata atccaaataa tgtttggctt gcaccttttt ctgctgtaac
      781 tactcttaag ggggatgaag ggcatattgt tttggcttta atacagaatt attttagtgc
      841 cgtggaaaat gcttttaaag atggtaattg gactagagct gatgaaggct tgaaatttat
      901 caaagaatat caagaaaaaa taggatataa agtcatgcct agtaaaacca aggttgaaat
      961 ggaaattttt tctaataagg ctgaaatttt cgttaaactc gctcctgtat atttaattgc
     1021 gggtttttta cttttgattc ttgttttttc taaaatggtc gtaccgaatt taaaaatctc
     1081 ttttatattt aaagtggtat atgttttaaa tgttttagct tttgtaattc atacagtagg
     1141 tcttggactt cgtgcttatt tatcaggtca tgctccatgg agtaatggct atgaaagtat
     1201 ggtgtatata gcttgggcat tgtctttgtc gggtatattt ttctctagaa aaagtcctat
     1261 agccttgtca ttaacttcta ttttatccgg tgttgtatta atggttgcac atttaagcga
     1321 aatgaatccg caaattacaa atcttgttcc tgtgctcaat tcttattggc ttagtattca
     1381 tgtatctgtt attactgcta gttatggatt tttaggactt tgtgccttac ttggtatctt
     1441 tacactgttc ttaatgtgtt ttcttaagaa agatggaaaa tataatctta atattttgag
     1501 aaatattaca gaggctacaa gaattaatga aatggcaatg atttttggac tttgtttgct
     1561 tactgtagga aattttttag gtgcaatttg ggcaaatgaa agttggggga gatattggag
     1621 ttgggattct aaggaaactt gggctttagt tagcattttg gtttatgcag caattttgca
     1681 tcttagaatg attccaaaat attgtaatca atttgtgttt gctttatgga gtatgtttgc
     1741 ttattgggtt attattatga cttattttgg agtaaattac tttttaacag gacttcattc
     1801 ttacgctgca ggcgaagcgg ctcaaattcc taattatgtt tattggggat ttgcattgat
     1861 ggtggtttta gctctttttg caagaaggaa gcgaaatttt gtaggcaaac tgtaaatgag
     1921 ccatattttt ttggttattt tttgtgctgc tttagcgctt ttattgtttt taggcatgat
     1981 tgcttatctt attacaagtg atggcaaaaa aacaattaaa aagcaaaaaa ctagccaaaa
     2041 gcagcatgta gctgaaaaga ctaaaaaatt tgatacagac ttagataaaa tgataattgc
     2101 tgcttccgat gttaaactaa cagatattga attaaaagaa cttgctaaac tttatgtgca
     2161 gacacataaa cttggttcaa aaacttctaa agaattagat gaagcaacaa aaaagaaact
     2221 agaatttgtt tctgctttgg ctgcaaatat taatgcaagt gcacaaacag taagttactt
     2281 aaataaagaa cttaagaaaa tttctggatc ttacaaaaaa gaaattgatg cttatgagca
     2341 tatgggattg gctaaaagaa aaattaaaga agataaataa tatggtgcgc tcaagaggat
     2401 tcgaacctct ggccttttga accgcaatca aatgctctat ccagctgagc tatgagcgca
     2461 aaaataagtt aaaattatat ataaatattc ttaaaataag caaaattttg cttattttgt
     2521 ttgtttttta gcttttttac cttcatctaa atcaaattct ttagtctttt ttgaatgata
     2581 aaatataaaa cctacaatca aaatacagca aatcaaagaa aaaatataaa gtgtgccata
     2641 agggctatct ttgaaaaaaa gattattagt attcattcca aaaaatccta cgatcaaatt
     2701 taaaggcaag aaaatagaag aaagtatact taaaagataa atacttttat tcattttttc
     2761 atttttaatt gcacttgtta atgtataaag agtatcaact cttactagat gttctttggt
     2821 gtttttactt aagatgctga tggataaatt tagaattttt aaatgttttt tgtattgtgt
     2881 ttgttcgcta agcaaaagat taaaagcttc gcttagaaga ttaatttgct ttagattttt
     2941 gttgattttt tgtcttaaca caaaggattt tttgtaaaaa tttttaacaa aaccaccttt
     3001 taagataata ccttctttgt gttctaaaag gttttgaaaa tgagtatttt gtactttaaa
     3061 atcttctaaa atggatttaa t
//
LOCUS       DARBAC010000130         3007 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.130, whole genome shotgun sequence.
ACCESSION   DARBAC010000130 DARBAC010000000
VERSION     DARBAC010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.130"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1533
                     /locus_tag="SB799_001594"
     CDS             <1..1533
                     /locus_tag="SB799_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HEG0868817.1"
                     /translation="IDEEKFIPEFINFLDQDNYKENFIKVKEAISKGRVYQINLTQNF
                     KFHSKMDSFELFKLLLSRQDTEFKAFIKDETREILSFSPELFFKTKKRKIFTKPMKGT
                     IKRDKDPIKDEENKTFLQNDTKNLSENVMICDLLRNDLSKIITKKSLKTKLFEIQSHP
                     TLHQMTSSVQGKLKKNISLYQIFKALFPCGSITGAPKLESIKFIEELEQRDRGIYCGT
                     IGLIHKNKNKFSVAIRTLEKQDEIYTYSTGSGLVWDSKFKDEFEELKLKSAILNPCDF
                     HLFETIYFKNSQILFLKEHLLRLINSALKFNFNTHKLFKDFYNILNQKSSYKEYQNFT
                     LFKLDEKIFHKKHSLFYNFPLPFKNPHKEGILKLILYKDGRYEFQQSALKQNSNDILL
                     LSDDKINSKSDNLYHKSSLRTFYNQHSYKWQQNLCYDIAFFNEKDELCEGSRTNLILE
                     KNTQFYTPQIQSGMLNGVYRNFLINLGLIKEKALFKQDLFEAENIYCINSVRGLKKVK
                     LQ"
     gene            1530..2096
                     /locus_tag="SB799_001595"
     CDS             1530..2096
                     /locus_tag="SB799_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEG0868818.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEIFGGRVSKMQNP
                     MHGKISKLYFKKDPIFKGIKKEIEICLYHSLHISSMPKKCKILAHNSENIIMAIKHKK
                     YPIYGLQFHPEAVLTQKGKKILKNFMKL"
     gene            complement(2083..2955)
                     /locus_tag="SB799_001596"
     CDS             complement(2083..2955)
                     /locus_tag="SB799_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEG0868819.1"
                     /translation="MGVFLVLLGGIFWAISGVLAEYLFKNNYSVDWVCFYRLLSTGLI
                     LIFLSFKAQKILVFTNLKESLSICMFGFFGLLLTQFGYFKAIYYTDAGTATMIQYCAP
                     LIIMLYLCFKNKKFPKLIEIFALILIIFALFLLATKGDIEAVVLNYWGIFWAVIGAFG
                     VAFYSLSAREVILKYGLFWIMGWASLFASFVFLLILQFDKGLIHYAFNLKAFFSMGGI
                     VFIGTIGAFCLYLKGVEYIGALRASMIASIEPVAAALMSFLFLKTRYSLLDIFAFVLI
                     ILSVILNAKKTKAS"
BASE COUNT         1258 a          471 c          339 g          939 t
ORIGIN      
        1 atcgatgaag aaaaatttat tcctgaattt ataaattttt tagatcaaga taattacaaa
       61 gaaaatttca tcaaggttaa agaggcaatc tccaaaggaa gagtttatca aatcaacctc
      121 actcaaaatt ttaaatttca tagcaaaatg gattcttttg aactttttaa acttttactt
      181 tctagacaag atactgaatt taaagctttt ataaaagatg aaacaagaga aattttgtcc
      241 ttctcacctg aacttttctt caagaccaaa aaaagaaaaa tatttacaaa acctatgaaa
      301 ggcacaatta agcgtgataa agatcctata aaagatgaag aaaataaaac cttcttgcaa
      361 aatgatacaa aaaatctaag tgaaaatgtt atgatttgcg atcttttacg caacgatctt
      421 tcaaaaatca tcacaaaaaa aagcttaaaa accaaacttt ttgaaattca aagtcaccct
      481 actttacatc aaatgacttc aagcgtacaa ggaaaactta aaaaaaatat ttctttatat
      541 caaattttta aagctctctt tccttgtggt tctattacag gtgctccaaa gcttgaaagc
      601 attaaattta ttgaagaatt agaacaaaga gatcgtggta tttactgcgg aactataggt
      661 ttaatacaca aaaataaaaa taaatttagc gtagccatac gcaccttaga aaaacaagat
      721 gaaatttata cttatagcac gggtagtggc ttggtttggg actcaaaatt caaagatgaa
      781 tttgaagaat taaaacttaa aagtgcgatt ttaaatcctt gtgattttca tctttttgaa
      841 accatatatt ttaaaaattc tcaaatttta tttttaaaag aacatttatt aaggcttata
      901 aattcagctc ttaaatttaa ttttaatact cacaagctct ttaaagattt ttataatatt
      961 ttaaatcaaa aaagttctta taaagaatat caaaatttta cactttttaa actcgatgaa
     1021 aaaattttcc acaaaaaaca ctctttattt tataattttc ccctaccctt taaaaatcca
     1081 cacaaagaag gaattttaaa gcttatttta tacaaagacg gaagatacga atttcaacaa
     1141 agtgccttaa aacaaaattc aaacgatatt ctgcttttaa gtgatgataa aattaactca
     1201 aaaagtgaca atctctatca caaaagctcg ttgcgtactt tttataatca acactcatac
     1261 aaatggcaac aaaacttgtg ttatgacata gcttttttta acgaaaaaga tgaactttgc
     1321 gaaggctcaa gaaccaatct catcttagaa aaaaacactc aattttatac tccacaaatt
     1381 caaagcggta tgttaaatgg cgtatataga aatttcttaa tcaatcttgg tttgataaaa
     1441 gaaaaagcat tatttaaaca agatttattt gaagcagaaa atatttattg tattaattcc
     1501 gtgcgtggtt taaaaaaggt aaaattgcaa tgaagaaaat tttatttata gataattatg
     1561 attcttttag ttataccatc atctattatc ttaaagaact tggttttgaa tgtaaagtga
     1621 taaaaaatga tgcctttaaa aaagctaaag aattagaaaa atttgatttc actcatctta
     1681 tcatctctcc tggccctcat tctcctaagg aatctaaatt aagcttaaaa gcaatcaaat
     1741 attttaaaaa aaataaaaaa attttaggta tatgtttagg acatcagtgt atagctgaaa
     1801 tttttggcgg tagggtttct aaaatgcaaa atcccatgca tggcaaaatt tctaaacttt
     1861 attttaaaaa agatcctatt tttaagggta ttaaaaaaga aattgaaatt tgcttatatc
     1921 attctttaca cattagttct atgcctaaaa aatgcaaaat tttagctcat aattcagaaa
     1981 atattattat ggcaattaaa cataaaaaat atcctattta tggattgcaa tttcaccctg
     2041 aagcggtttt aactcaaaaa ggcaaaaaaa tacttaaaaa ctttatgaag ctttagtctt
     2101 ttttgcattt aaaataacac tcaatataat caaaacaaaa gcaaaaatat caagcaagct
     2161 ataacgggtt tttaaaaata aaaaactcat taaagcagct gctacaggtt ctatggaagc
     2221 aatcatacta gctcttagag cgcctatata ttccactcct tttaaataca aacaaaaagc
     2281 ccctatagtt ccgataaaga caatcccgcc catagaaaaa aatgctttta agttaaaagc
     2341 atagtgaatt aaacccttat caaattgcaa gattaataaa aatacaaaag aagcaaaaag
     2401 actcgcccaa cccattatcc aaaaaagacc atattttaat atcacttctc tagcacttaa
     2461 agaataaaaa gcaactccaa aagctcctat aacagcccaa aaaatacccc aataatttaa
     2521 aaccaccgct tcaatatctc ctttagttgc aagcaaaaac aaagcaaaaa taatcaaaat
     2581 caaagcaaaa atttctatca atttaggaaa ttttttattt ttaaagcaca aataaagcat
     2641 tataattaaa ggtgcacaat attgtatcat agttgcagtt ccagcatcgg tataataaat
     2701 agccttaaaa taaccaaatt gtgttagcaa aagcccaaaa aatccaaaca tacaaatact
     2761 taagctttct tttaaatttg taaaaactaa aatcttttga gctttaaaac ttaaaaaaat
     2821 caaaatcaac cctgtagata aaagcctata aaaacaaacc caatctacgc tataattatt
     2881 tttaaaaagg tattcagcta aaacaccgct aatagcccaa aaaatacctc ccaaaagaac
     2941 taaaaatacg cccattgcaa accttaataa aaattatttt aaattatagt atattttttt
     3001 taaataa
//
LOCUS       DARBAC010000131         2945 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.131, whole genome shotgun sequence.
ACCESSION   DARBAC010000131 DARBAC010000000
VERSION     DARBAC010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.131"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..955)
                     /locus_tag="SB799_001597"
     CDS             complement(<1..955)
                     /locus_tag="SB799_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEG0868820.1"
                     /translation="MSVVRFFFILIMVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQTNEETTNQESKSTDENLSKIDKVLNTLENDENTS
                     HKETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFIKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSPS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSDEILKNKEIF
                     INTKLFFSVNDEYSAYIKDENNRSIKVRTDDGVHFTPSGARE"
     gene            complement(956..2332)
                     /locus_tag="SB799_001598"
     CDS             complement(956..2332)
                     /locus_tag="SB799_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEG0868821.1"
                     /translation="MTYFSLEFSILMIAFFAIYWTFKNDYKIQNILILIFSYIIYILI
                     NPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLCFFKYFPSIKGSVDEI
                     LNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSG
                     PIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNF
                     IQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPPNFNMPYLAKNLKDFWARWHI
                     SLSTFIRDYIYIPLGGNRKGIPRTVANILIAFILSGMWHGNTLAFIVWGLLHGIGIVF
                     IHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAIEYFKACYYNFFQIPS
                     YNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPDGI
                     PDFIYSSF"
     gene            complement(2375..2878)
                     /gene="ctf"
                     /locus_tag="SB799_001599"
     CDS             complement(2375..2878)
                     /gene="ctf"
                     /locus_tag="SB799_001599"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HEG0868822.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
BASE COUNT         1091 a          420 c          425 g         1009 t
ORIGIN      
        1 tttctcttgc gccacttgga gtaaaatgaa ccccatcatc tgttcttact tttatacttc
       61 tattgttttc atcttttata taagctgagt attcatcatt gacactaaaa aatagcttag
      121 tgttgataaa aatttcttta tttttaagaa tttcatcgct gtaaatttta ttgagcactt
      181 gtattttttt gttcaaatct tcttttttta caggagggat ttcaaaccaa aaaactttgg
      241 ctttatgttt tttagcgatt ttaatgattt catctacacg acttgtgtaa atatctatcc
      301 aagaagggga gccaaaacga tggtaatttc ctcctttttt aatatcccaa ggatcattag
      361 cgccaagaag aacaacaaga tatttaatat ttgagttttt aataaaagct tcattggtgg
      421 cttttgacca gtcaaaatag gatttataag aaaggcctgt attttgttta ctaagatcgg
      481 ttaccttaag atttaaattt cttaaatctc tatttaaggc tattgcaaca ccttgcatta
      541 aagaatctcc gataaataaa aactcatctc cattttgtag ctctaatttg gtattgtcga
      601 taaaactaat atttgcatct tggattaagg ttagatttgt ttctttatga gaagtgtttt
      661 catcattttc taaagtgttt agaactttat ctattttact taagttttca tctgttgatt
      721 tactttcttg atttgtagtt tcttcattgg tttgaggcaa gggttcgttg cttaaaattg
      781 cacgaatttg ttctaattta attttgaagc cattggcttc ttttaaaaga tcattatgag
      841 gatagaatgc aaaatgatat ttttgttcta tataagagct aatgctctga ttcataacta
      901 caacaaccaa gccaagcacc ataatcaaaa tgaagaaaaa tctaactaca ctcatctaaa
      961 aactcgaata aataaaatca ggaattccat ctggcataaa agcaaaaacc aaaagtaaaa
     1021 taaaagctat gataaaaggt tttagtaaaa atggagtaag atttaaaatc ttaatgcaat
     1081 attctttaaa attaataaat aaaggataga tcataaaaag aaccccaaaa gcaaccaaca
     1141 tatagatatc gttataagat ggaatttgga agaaattata ataacaagct ttaaaatatt
     1201 ctattgcatc ttctagattt ttgctataat aaaagaaaat ccaagtaaaa catacaaatt
     1261 gaaaggttaa aaatcttcct aaagctggaa ttttttgtaa actaaatttg cttaaagcta
     1321 gcaaatgtat aaaaactatg ccaataccat gcaataaacc ccaaacaata aaagcaagtg
     1381 tattgccatg ccacatacct gaaagtataa aagcgatgag tatattagct acagtgcgtg
     1441 gtattccttt tctattgccc cctaaaggta tatagatata atctcttata aaggttgaaa
     1501 gactgatatg ccatctagcc caaaaatctt ttaggttttt tgcaagataa ggcatgttaa
     1561 agttaggcgg aagggtaaaa cctaacatta aagcaaaagc acaaactaaa tcaacatatc
     1621 cgctaaaatc gcagtatatt tgaattgcat aggcgtaaat tgcgcttaaa agttgtatga
     1681 aattataaga ttgtggaaag tctaaaatac ttttagcata aattccaagg taattggcta
     1741 ttaaaacttt tttaactata ccaaaaacaa gcaagatgat gattaaattt gcatgtttaa
     1801 attcgcgttt ttgataggcc tgttcaaaga aaaaagaact tcgcataatg ggccctgaaa
     1861 gtagtgttgg aaaaaatgat aagaaggttg ctaaatttaa aaaactttct aaacggcgtt
     1921 tttgataaac ttctacaaga taagtaatag aagtaaaggt ataaaaacta attcctattg
     1981 gtaatactaa atcaatattt aaaaattcta aaccgaaaaa atttaatatc tcatcaacac
     2041 ttcctttgat actaggaaag tatttaaaaa aacataaatt taaaataata aaagccatgc
     2101 aagtagcgaa aatataacgc ttgcgacgca caaaaattag caaggcaaaa tagtgtataa
     2161 aaaaggtata tataaataaa actaaggcga aataaggatt gattaaaata taaataatat
     2221 aagagaaaat taaaattaaa atattttgta ttttgtaatc atttttaaaa gtccaataaa
     2281 tagcaaaaaa agctatcatt aaaatactaa attctagaga aaaataagtc ataccttcaa
     2341 tccaaagcga gatttgccca tagtagggca aagattattt ttttctgctt aatgcaatat
     2401 ttttgatgta ttgatcagct aaataaagtc catttccgtg ttctccgatt aacttaatct
     2461 tgtcaactat accgcggaaa agtgcttctt cttcgtgttg ttcgcttaca taccattgta
     2521 agaaattaaa agtagaatag tctttatgtg ttagcatgtg ttcaactaaa gtattgattg
     2581 attttgtgat aaattgctca tgttcatagg ttttttcaaa aacatcaagt aaagatttga
     2641 aattttgttc aggctgtttt acttcttgaa gctctacatg agaatctgtt tcattaagat
     2701 aagtgataag ctttttagca tgatcgcttt cttcgcttgc atgtgcaaac aagaaggctc
     2761 cagctccatc aagactgttt tcatagcacc aagaactcat actaagatat aagtttgctg
     2821 catacatttc tttgtttatt tgttcattga gtaattttac aacttcttta gaaagcattc
     2881 ttatctcctt attaaaattt aaaatgtttt ataatgatat attatttttt taaaaacaag
     2941 ctaaa
//
LOCUS       DARBAC010000132         2916 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.132, whole genome shotgun sequence.
ACCESSION   DARBAC010000132 DARBAC010000000
VERSION     DARBAC010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.132"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..789
                     /locus_tag="SB799_001600"
     CDS             <1..789
                     /locus_tag="SB799_001600"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEG0868823.1"
                     /translation="RKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGY
                     KRKSKGLFVVKNQNEILCTLTQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAK
                     IVVLDDAFSKFHIKKFDILLESKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFV
                     RYSFVKENPKAVLVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDT
                     LMLTFKDFVKVKDFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            786..2198
                     /locus_tag="SB799_001601"
     CDS             786..2198
                     /locus_tag="SB799_001601"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEG0868824.1"
                     /translation="MKLVESRNVKNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNILSEFFNQGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILTLFDLKNS
                     DEKVFEARNIKKEILDWMQK"
     gene            2195..2914
                     /gene="kdsB"
                     /locus_tag="SB799_001602"
     CDS             2195..2914
                     /gene="kdsB"
                     /locus_tag="SB799_001602"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEG0868825.1"
                     /translation="MIIIPARLKSSRFHEKILCDIGGVPMFVATARRVSSVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKDHESGTDRINEACKKLALKDDEIIINVQADEPFIECE
                     NLLKFKEFASSCLDKKAFMASCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYERALKIYLEK"
BASE COUNT         1079 a          325 c          560 g          952 t
ORIGIN      
        1 cgtaaaaaaa tagtttttaa aaagcctgtt attagcgttg gtaatttaag ttttggaggt
       61 aatggaaaaa ccccgctttg taaagctata gcaagggaat ttgatggcgt ttttatagtg
      121 cttaggggct ataaaagaaa gtctaaaggt ttgtttgttg ttaaaaatca aaatgaaatt
      181 ttatgcacct taacgcaaag tggcgatgaa gctatggagt atgcttttga agaaaatatc
      241 aaaggtgtga ttgtgagcga agatagagta aaaggtattg aaaaagcttt tgagttggga
      301 gctaaaatcg ttgtacttga tgatgctttt tctaaatttc atattaaaaa atttgatatt
      361 ttacttgaaa gcaaaatcaa accttatttt aattttacct tgccaagtgg agcttatcgt
      421 ttgccgaaat tttatgaaaa aagggctgat tttattgcat tagaaggcag ggattttgtg
      481 cgttattctt ttgtaaaaga aaatccaaag gctgttttgg taactgctat tgctaaacct
      541 tttagattgt atgagcattt tatcaaagca agggcttgtt atttttttaa agatcattat
      601 gagtttaaaa aagaagaatt agaaaatttg ctaaaaaaac ataattgcga tacactaatg
      661 cttactttta aggattttgt taaagttaaa gattttggtt ttaaatgtca aattatagaa
      721 ttaaatatag aattaaaaga ttcattaaga gaaaaaataa aaacttatat caaggagttt
      781 gaacagtgaa attggtcgag agtagaaatg taaaaaatgt atcaagtttt aaggaagctt
      841 tgattaaccc aaacgcccca gaaggagggc tttactcacc tttaaatttg cctatttttg
      901 aaggagaaaa atatgccaat ttgtcttata aagattttgc tttaaagctt atagaaagtt
      961 ttggttttgg cgaagaagag ctttttaaaa aggctttgaa aagttacgaa agctttgatg
     1021 ataaaaatac acctatttct ttgcaaaaaa tctctgaaaa aacctatatt aacgagcttt
     1081 ggcatggacc tacaagagct tttaaagata tggctttgca gccttttggc gtgcttttaa
     1141 gtgaattttc aaaggataaa aatattttaa ttatttgtgc tacaagcggc gatacaggac
     1201 ctgcaaccct aaaaagcttt gaaaatgcaa aaaatgttaa agtagcttgt atgtatccaa
     1261 aaggtggcac aagtggagtt caagagttgc aaatgcgagc tttagataag gataacttga
     1321 aagtttttgc catagatgag gattttgacg cagcgcaacg cactttaaaa gaattgcttt
     1381 tttcaaaaga ttttcaaaat gaaattaaag ctttaaatta tgagctttgc gcagctaatt
     1441 ctgtaaattt tgggcgtatt ttatttcaga ttatttatca ttattatgcg agtttaaaac
     1501 tttttaatga gtttttagaa gaagtacaaa tcatcgttcc aagtggaaat tttggcaatg
     1561 ctttaggagc tttttatgct aaaaaaatgg gagctaaaat ttcaaaaatc aaaatcgctt
     1621 caaacgcaaa taatattttg agtgaatttt ttaatcaagg cgtttatgat ttgcgtgaaa
     1681 aaagtcttaa gaagactatt tctccagcta tggatatact tatttcatct aatatcgaaa
     1741 gacttttgtt tgcgaaattt aaagataaaa gaactaaaga actgatgaat ttgttaaaaa
     1801 atgagagata ttttaaactt gaaaaagaag aattacaaag tttgcaagaa gattttgagg
     1861 cggatttttg caccgatgaa gaatgtatgc aatttatcaa acaaagtaaa attttaattg
     1921 atccgcatac cgcaacttgt tttaaaatgc ttgatccttt aaaacctagc attatcactt
     1981 ctacagcaga atggacaaaa tttactccaa gtatgataaa agctttatat gatagggatt
     2041 ctaagaatga aaaagaagat ttaaaattta tagctaaaga gtttaatgtc caagttaaag
     2101 atgaaatttt gactttattt gatttgaaaa atagcgatga aaaggtattt gaagccagaa
     2161 atataaaaaa agaaatttta gattggatgc aaaaatgatt attattcctg caagattaaa
     2221 atcaagtcgt tttcatgaga aaattttatg tgatataggt ggagtgccta tgtttgtggc
     2281 tactgcaaga agagtaagta gcgtggatga agtttgtata gctttagacg atgaaaaggt
     2341 tttaagtatc gctaaagaat atggtctaaa tgcggtttta acaagcaaag atcatgaaag
     2401 cggtacggat aggattaatg aagcttgtaa gaaactagct ttaaaagatg atgagattat
     2461 tatcaatgtc caagctgatg agccttttat agaatgtgaa aatttattaa aatttaaaga
     2521 atttgcaagt tcttgcttgg ataaaaaagc ttttatggcg agttgttata aaaaaatcac
     2581 tcaagaagaa gctatggatc ctaatctggt taaagtgctt tgcgataaag aagggtatgc
     2641 tttgtatttt tcaagagcta aaatccctta tgaaagagaa aattacgagg aaagttttaa
     2701 agggcattta ggcatttacg cttatagtgt aaaagcatta agggagtttt gttctttatc
     2761 aagttctgcg cttgaaagag cggaaaagtt agagcaatta agagctatag aaaatggtaa
     2821 aaaaatcaaa atgcttgaaa tttcaacaac aagcatgggg attgatacta aagaagacta
     2881 tgaaagggct ttaaaaattt atttagaaaa ataact
//
LOCUS       DARBAC010000133         2886 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.133, whole genome shotgun sequence.
ACCESSION   DARBAC010000133 DARBAC010000000
VERSION     DARBAC010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.133"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            24..551
                     /locus_tag="SB799_001603"
     CDS             24..551
                     /locus_tag="SB799_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEG0868826.1"
                     /translation="MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSF
                     EGKVVRIIDGDTIEVNHENKLTRIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEII
                     YKNKDTYGRIVAIVKLNNVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKE
                     GNPIEPYKWRKHNKF"
     gene            560..733
                     /locus_tag="SB799_001604"
     CDS             560..733
                     /locus_tag="SB799_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868827.1"
                     /translation="MKKYTLMILLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     VCPKNWVDIKMTP"
     gene            complement(734..1312)
                     /locus_tag="SB799_001605"
     CDS             complement(734..1312)
                     /locus_tag="SB799_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868828.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLTGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(1384..2274)
                     /gene="cmoB"
                     /locus_tag="SB799_001606"
     CDS             complement(1384..2274)
                     /gene="cmoB"
                     /locus_tag="SB799_001606"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HEG0868829.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYTKIQELKALNLACNFSLDDSVNL
                     STNSQAKDEILAITKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIEYELLGVEDLPRY
                     GLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYVRIGI"
     gene            complement(2348..2886)
                     /locus_tag="SB799_001607"
                     /pseudo
     CDS             complement(2348..2886)
                     /locus_tag="SB799_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790742.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
BASE COUNT          987 a          431 c          414 g         1054 t
ORIGIN      
        1 tttaaaggca aaatgattaa aaaatgagaa taaattataa aaaattattt aatttaagaa
       61 aattactaag tgatccaaaa aaactttttt ctgtattaat ttttactctt gtagttgttt
      121 ttatccagaa ttatattgcc caaaattcta gttttgaagg aaaagtagtt agaattattg
      181 atggagatac tatagaagtt aatcatgaaa acaaactcac tagaataaga ttttttggta
      241 tagatgcacc agaacttaaa caaagttttg gaaagcaatc aaaagaagct ttaagtagaa
      301 ttttaagcgg taaacaagtt gaaattattt ataaaaataa agatacttat ggtagaattg
      361 ttgctattgt aaagcttaat aatgttgata ttaatcgatt tttagtaagc aaaggctatg
      421 cttgggctga tacttactat agtaacgctt atattaaaga acaagaaaat gctaagaaaa
      481 atcatttagg tctttggaaa gagggtaatc ctatagagcc ctataaatgg agaaaacaca
      541 ataaattcta aggaaaaaca tgaaaaaata tactttaatg atactattag ttttaggaat
      601 ttctggatgt tttgtaaatg aaagaggaat ttcaaatcgt ttttatgatg attgtaaaga
      661 atattatgat ggaagtggaa cttatcataa ggtttgccca aagaattggg tggatattaa
      721 aatgactcct tgattatttt ccacccacag aggccattaa tgcagctgct acggcttctg
      781 gattgttgat tttggcacct tgttcttgat tttctgtagg tttaacagta ttaagtggcg
      841 gacgcttgag tttaaatata tgctcatcag tgctaacaac ttgtatcgtt ccttcaaaca
      901 ttttaatttc tttaacatgc ccgaccactt ttacatctct ttttttggag gtttcgtcaa
      961 aaagtgcatg agcttcaagt tctaaaacat cgcctaattt aagcggagca taaaaaaaac
     1021 attttgatcc aataatcact gaaaattctt tattgataga ggcttgtgct acatagtttg
     1081 ccgcagcgaa aataaaggca tcaaaaatca atccttgatc atctgctacc atttcgcttg
     1141 tggttattaa aattgatttg gcatagtttt tatcaatttc tataatggtt ccagtaagcg
     1201 aagtgtttaa ttcaggacaa gtgagtaatt ctgctctaac acgagatata tcttctgcag
     1261 atgcgtattc ttcaagttgt gcatattctt caaaattatc tttttttgcc atatctaacc
     1321 tttaaattct acttatctac ttcaaaatat ctaaagccta gatcgacaaa aagcaaaaag
     1381 aatttatatc ccaatacgca cataaactct tttgggtgct tcatagcctt caatggtaag
     1441 atttttatcc tttggatcta agaaattttc cagcgaaaaa gagtctatcc attctgtttt
     1501 tctttgttcg ttttcatcgg ttttttttgt agccaaaact tcaaattctt taaatcctgc
     1561 tctttcacac cagtttttta atgcactaat gcttggtaca aaataaatat ttggaatttt
     1621 agaataagtt ttattaggca caagagcgat ttctctctca tcttctatat acatggtatc
     1681 taaaaaaaca actccatttt tattaagtcc tgcttttaaa tcttttagca tttttatagg
     1741 atcacttcta tgataaatca ccccaagaca gaaaatcaca tcaaatttca agccatatct
     1801 tggaagatct tctacgccta aaagttcata ttctatagga gttttagcta aagcgttaat
     1861 gagttcaaat tgcaaacggt atttgataga aggatcaaaa cctatgagtt ttgcaggatt
     1921 aaattcaagc attttaaaca tataataacc attattacag cctatatcag caacgcattt
     1981 ttgagaaatt tcgttcataa aaggctttaa aatattaaat ttaataaaac tttgccattc
     2041 tgtatcgatg aaaagatcgt ctattttaaa aggacctttt ctccatggtt taagttcttt
     2101 tgttatagct aggatttcat ctttggcttg agaatttgta gataaattta cactatcatc
     2161 taaagaaaaa ttacaagcaa gattgagagc tttaagttct tgaattttag tgtataaagg
     2221 gtgatttaga aattgttttt cgagtaaatt ttcttgcatt tttatccttg acatttgctt
     2281 ttaatgctaa attataacat taaaagcttt tagaattagc aagtataagc taagattatt
     2341 tttaaaatca aaacccttcc gaataaacct tataaaattc taaagcttct ctacattttt
     2401 tacatttgaa tttcttacct tgtaatttga ttttttcatg aattccaaaa ggcacatcat
     2461 ggatagcacc tgagcacttg caaatataaa gataaacagc attttcaagt tcttcatcgc
     2521 cttcttcttc aaagcttacc tctttatcat cttcagaagc taaagaagat cttctatatt
     2581 gttcaacttt catatcttca taaagtatat gttctaaaag ccatttttta acagctaaat
     2641 aaagtttttc ttttaaatca ttagtggatt taatattttt aatcagttct atcatggatt
     2701 ggataatatg tttatgaatt ttttatgtgt ttcaatatct ggatatttaa tcagttccat
     2761 gtatcgctct tcttcataaa aatgatcttt catataatta aaaaattcag caagtaaatt
     2821 tttaatctca tccttataaa cgggtttatc aatcaaatat tctaccttac ccgcaagttc
     2881 aaaaag
//
LOCUS       DARBAC010000134         2769 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.134, whole genome shotgun sequence.
ACCESSION   DARBAC010000134 DARBAC010000000
VERSION     DARBAC010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.134"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            57..1019
                     /locus_tag="SB799_001608"
     CDS             57..1019
                     /locus_tag="SB799_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEG0868830.1"
                     /translation="MQGKKYEIFLNENEQSLITPKVSFKEILRYYYLYPKNAIPSFKL
                     PFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPVFNTHASPISFINKAFKNTPVY
                     NVNDFNEIFAVIITHSHFDHLDAKSIKALKEKARFFITPLKVGNYLKSYGVSEKKIIE
                     LDWWSGVEFGDLKIIATPAQHSSSRGDGKNKTLWASFVMEFLSVDKRVFFSADGGYFT
                     HFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPDQILKEAKDLNAKAVMPIHWGRFLV
                     GTHAWNEVIKFLYENLDLPLITPKMGEAYEIGAKFKQDFWWKEG"
     gene            1089..1430
                     /locus_tag="SB799_001609"
     CDS             1089..1430
                     /locus_tag="SB799_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEG0868831.1"
                     /translation="MKIIQWNRAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNVLDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     VQRVNAVLKKP"
     gene            complement(1480..2649)
                     /locus_tag="SB799_001610"
     CDS             complement(1480..2649)
                     /locus_tag="SB799_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEG0868832.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QIIKNAAISAIEKGCGKYTAVAGIPEVLKAIQIKFKKDNNLDYETSEIITNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFVEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSEDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDKDIEKMRQAFEKRRNLALDILKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMNFCQKLLEQEKVAVVPGVGFGMDGYFRLSYATSDELIKKGLERIANFIKNYK"
BASE COUNT          907 a          393 c          468 g         1001 t
ORIGIN      
        1 atttatcatt taaaaccttt gatatttcta atgtgcaacg atcaaaagct aaaaaagtgc
       61 agggtaaaaa atatgaaatt tttcttaatg aaaatgagca aagtcttata actcctaaag
      121 tgtcttttaa agaaattttg aggtattatt atctttatcc aaaaaatgcc attccttctt
      181 ttaaattacc ttttttcaag cctgatttga gtggttttag cactccgcat attacttggc
      241 ttggacattc ttcgcttttt ataagtttta aagaatataa aattttgatt gatcctgttt
      301 ttaacactca tgcttcgcct atttctttta tcaataaggc ttttaaaaat actcctgttt
      361 ataatgtaaa tgattttaat gaaatttttg ctgtgattat cacgcattcg cattttgatc
      421 atttagatgc taagagtata aaagctttaa aagaaaaagc acgatttttt atcacacctt
      481 taaaagtggg aaattatcta aaaagctatg gggtgagtga gaaaaaaatc atagagcttg
      541 attggtggag tggagtagaa tttggtgatt taaaaatcat tgcaacacct gcacagcaca
      601 gttcaagtag aggagatggt aaaaacaaaa ccctttgggc ttcttttgtg atggaatttt
      661 taagtgtaga taagagagtg ttttttagtg cagatggagg atattttaca cattttaaaa
      721 aaataggtga atattttgga agttttgatc tagcttgtct tgaaagcgga cagtttaata
      781 tcgcttggcc atattcacac tcttttcctg atcaaatttt aaaagaagcg aaagatctta
      841 atgcaaaggc tgtcatgcct atacattggg ggagattttt agtaggaact cacgcgtgga
      901 atgaagtgat aaaatttctt tatgaaaatt tagatttacc ccttatcaca ccaaaaatgg
      961 gcgaggctta tgaaataggg gctaaattta aacaggattt ttggtggaaa gaaggataaa
     1021 ttaacacaag tttataatct atattttggt ttttgctata gttttataaa actaaaaaag
     1081 gagattttgt gaaaatcatt caatggaata gggcggaatt tagcccaaaa gaagtgaaaa
     1141 tcaatgtttt aattgacaat gaaaaaggta aagaaattca aattttatta gctaaagata
     1201 gtgtgatgaa agagcataaa gctccttttg ctatacatgt tcaagtttta agtggtaaaa
     1261 tttggtttga agtggaaaag gaaaaatttg aattaaatgt tttagatatg ataagcctag
     1321 aggcaaatgt agcgcattct ttaggtggat tagaaaattc tataataaga ttgagtttaa
     1381 ataaatcaga tagtgttcaa agggtaaatg ctgtgcttaa aaagccttga ttttataagg
     1441 ttttaatttg cctaaataat tctaggcttt aacctagaat tatttatagt ttttaatgaa
     1501 atttgctatt ctttctaaac cttttttgat aagctcatcg cttgtggcat aagaaagtct
     1561 gaagtatcca tccattccaa aacctacacc tggaacaacg gcaacttttt cttgttcaag
     1621 taatttttga caaaaattca tagaatcttt ttctattttt tgtatattta caaaaagata
     1681 aaaagcacct tctggtttat aaacactgat atttgggatt tgtttaagta tgtctaaggc
     1741 taagttacgg cgtttttcaa aggcttgacg cattttttct atatctttat cacattctcc
     1801 atttaaagca ggaatggctg catgttgagt gatggaacaa atatttgaag tgctttgtcc
     1861 ttgaagtctt ttaacggctg aaattagggc tttatttttg cttgccatat agccaaaacg
     1921 ccatcctggc atagccccgc atttactaag cccgttaata gtcacagtgc gttttaaagc
     1981 atcttcgctt acacttgcaa aagctacaaa atcaaaacca tcatagcgaa gtttttcata
     2041 catttcatca cttaaaacag tgatttgtgt tccttctaaa acttttgcaa tttgagttaa
     2101 ttcttcttta gaataaatcg accccacagg atttgaagga gaatttaaca tcaaaacctt
     2161 ggttttagct gtgatagctt tttttagttg ttcagcggta attttaaagc cattttcttc
     2221 taagccttct acaaatacag gttttccacc tgcaaatttt accatttcag gatagcttac
     2281 ccagtaagga ctagggataa tcacttcatc atctttttct actaaacatt ctatacattc
     2341 aaaaagagag tgttttgcgc ctacattggt gataatttcg cttgtttcat aatcaagatt
     2401 attatctttt ttaaatttga tttgaatagc ttttaatact tcaggaattc ccgcaacagc
     2461 agtgtatttt ccacatcctt tttcaatagc acttatagcg gcatttttga tgatttgtgg
     2521 tgtgtcaaaa tcaggttcgc ctgctgaaaa actaatgata tcttcgcctt tagctttaag
     2581 ttcattggca agtgcagtga tggctaaagt gatagattct tctaaaactt gagatctttt
     2641 tgtaagcatt tttcaatcct taataatttt tgtttaattt tagcagaaaa ttgcattttt
     2701 acaataaatt taatttaaaa atgagttata aatttcaata aatgtgaaaa tttgtattaa
     2761 ttttttagg
//
LOCUS       DARBAC010000135         2714 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.135, whole genome shotgun sequence.
ACCESSION   DARBAC010000135 DARBAC010000000
VERSION     DARBAC010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.135"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(9..95)
                     /locus_tag="SB799_001611"
     tRNA            complement(9..95)
                     /locus_tag="SB799_001611"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(59..61),aa:Leu,seq:caa)
     gene            276..2525
                     /gene="flgL"
                     /locus_tag="SB799_001612"
     CDS             276..2525
                     /gene="flgL"
                     /locus_tag="SB799_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HEG0868833.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQGYVKDNGLDPDKDFEYDDKLDFPPTTLYVQGTKPDGTSFKSAVLVKPEDTLE
                     DVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDRAEL
                     TGIIDAAKQEGISMDEVTNRVMQAATAAPSNGDITKLNSPVTVTINNQQFTIDLKQTD
                     FIKSKMTDTDGNATNGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMAG
                     DSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPITHTDPATGNSG
                     VVTGSNDITYGQINDIIGMFAADKIPTQSITATNGKVDANGYNNLQQLMKDSQATVDV
                     SMDYKGRISVTDKLSSGTNIEISLSDSQSGHFPQPPFSTTSSVTNGPNFSFSANNSLV
                     IDEPNVDIIKDLDSMIDAVLKGNMRADSESEDPRNTGMQGALERLDHLADHISKLNTT
                     MGAYHNTIEDVNTRSTFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTI
                     SQLSLLNYM"
BASE COUNT         1007 a          410 c          464 g          833 t
ORIGIN      
        1 aaaataagtg gtgcccgagg tcggactcga accgacacaa ggttgccctt accagatttt
       61 gagtctggcg cgtctaccag tttcaccact cgggctcatt tttaagattt aaagctaaaa
      121 ttatactttt ttaggctaaa aaatacttta aaaataaaaa gtattttcaa aaagacgata
      181 taaaattata taatttaaat ttttggaaca gttattgctt ttgtttatta gcaatgtttg
      241 aaaagatttt aactttaata ctttagagga aaaaaatgag aattacaaat aaacttaact
      301 tcacaaatag cgtgaataat tctatgggcg gtcaaagtgc tttatatcag atatctcaac
      361 aacttgcttc aggtttaaaa attcaaaatt catatgaaga tgcaagcact tatatagata
      421 atacgcgtct tgaatatgaa attaaaacat tagagcaagt aaaagaatca actagtagag
      481 ctcaagaaat gactcaaaat agcatgaaag ctttacaaga catggttaaa cttcttgaag
      541 attttaaagt taaagtaact caagctgcaa gcgatagcaa ttctcaaacc tcaagagagg
      601 ctatagcaaa agaactagaa cgcataaaag aaagtatagt tcagcttgca aataccagtg
      661 ttaatggtca gtatcttttt gcaggttctc aagttgcaaa caaacctttt gattctaatg
      721 gaaattatta tggagataaa aataatatta atgtagtaac tggagctgga actgaaagcc
      781 catacaatat accaggctgg gatttatttt ttaaagcaga cggagactat aaaaaacaaa
      841 taagcaccaa tgttagtttt acagataatc gttgggattt aaataaagac cctgataaaa
      901 ctaaatatct cacaggagat tctaaatggc aacagcttat cggacaaggt tatgtaaaag
      961 ataatggttt ggatcctgat aaagattttg aatatgatga taaactagat tttcctccaa
     1021 caactcttta tgttcaaggt actaaacctg atggaacaag ctttaaaagc gctgtacttg
     1081 taaaacctga agatacttta gaagatgtaa tggaaaatat cggagctctt tatggtaata
     1141 ctccaaataa taaagtagta gaagtaagca tgaatgatag tggtcaaatt caaattacag
     1201 atctaaagca aggcaacaac aaactcgatt ttcacgctgt agctttcaca ccacaagccg
     1261 atgatagagc tgaacttaca ggtattattg atgctgccaa acaagaaggc atttcaatgg
     1321 atgaagttac aaatagggtt atgcaagctg ctacagctgc tcctagtaac ggagatataa
     1381 caaaattaaa cagccctgta actgtaacaa tcaataatca acaattcaca atcgatttaa
     1441 aacaaactga ttttatcaaa agtaaaatga cagatacaga tggaaatgct actaatgggg
     1501 ctgattatga taatgtatat tttgaaaaaa atggaaatac tgtttatggt aatgtttctc
     1561 aagttatcaa aggaagcaat gcttatgcga ctgattcaac caaacttagt gaggtaatgg
     1621 caggagatag cctaaatggt actactttaa atttaaaagt caattccaaa ggtggaaatt
     1681 cttacgatgt tactataaat ttacaaactt caactgtaag ctatcctgat cctaataatc
     1741 caggtcaaac tataagtttt cctataaccc ataccgatcc tgcaactgga aatagtggag
     1801 ttgttacagg atcaaatgat attacttatg gtcaaattaa tgatattata ggtatgtttg
     1861 ctgcagataa aattccaacc caaagcataa cagctacaaa tggaaaagtt gatgcaaatg
     1921 gttataataa tttacaacaa ctcatgaaag attcacaagc tactgttgat gtaagtatgg
     1981 attataaagg ccgtattagt gttactgata aactttcttc aggtactaat atagaaattt
     2041 ctcttagcga ttctcaaagt ggccactttc cacaaccacc atttagcaca acttcttcag
     2101 taacaaatgg tccaaacttt agttttagtg caaacaactc tttggttatt gatgagccaa
     2161 atgtggatat tattaaagat ttagattcaa tgattgatgc tgttttaaaa ggcaatatga
     2221 gagcagattc tgaaagtgaa gatcctagaa atacaggtat gcaaggagct ttagaaaggc
     2281 ttgatcattt agcagatcac attagtaagc ttaatacaac catgggtgca tatcacaaca
     2341 caatagaaga tgtaaatact cgttctactt ttttaagcgt gaatgtacaa tctatcaaat
     2401 caaatgttat tgatgtagat tatggtgaag caatgatgaa tttaatgcaa gttcaacttg
     2461 catatcaagc ttctcttaaa gctagtacaa caatttccca acttagctta ttaaattata
     2521 tgtaaaattt tttatggtat aatttggctt tgattttatt ttcaaggaaa gaatattaaa
     2581 aaagaagcca tttttaccag ctctacactt gttatttttt atctttgtct ttgtatgcta
     2641 gcacctagca tgggagaatg ggtttacaag gctaatttat ttttatttgg agaatttggg
     2701 tattattatc catt
//
LOCUS       DARBAC010000136         2646 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.136, whole genome shotgun sequence.
ACCESSION   DARBAC010000136 DARBAC010000000
VERSION     DARBAC010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.136"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..635)
                     /locus_tag="SB799_001613"
     CDS             complement(<1..635)
                     /locus_tag="SB799_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HEG0868834.1"
                     /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLVGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEEQIYIK
                     LQDKNFTLNHIFSKENHYLIATLSNPFFIDVKKDLESNFKDLEENLNSIKN"
     gene            complement(635..2443)
                     /gene="typA"
                     /locus_tag="SB799_001614"
     CDS             complement(635..2443)
                     /gene="typA"
                     /locus_tag="SB799_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEG0868835.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
BASE COUNT          815 a          503 c          382 g          946 t
ORIGIN      
        1 ttgtttttta tagaatttag attttcttct aaatctttga aattgctttc taaatctttt
       61 tttacatcta taaagaaagg attgcttaaa gtagcaataa gataatgatt ttctttagaa
      121 aagatatgat ttaaagtgaa atttttatct tgaagtttga tataaatttg ctcttcattt
      181 tcaaagctag gatttttgtt tgcacttaaa atttcgagca aaattccgca aaaaaagcgt
      241 ttattttcgt ccaaaaactg aatatcataa attttaaaat ccttaaattc aaagcagttt
      301 tgacttttaa attctttcaa atcctttgta agtcctaatt ttaaaaagtc tttttggctt
      361 aaactttgct ttttaaattt tgccccaaaa cgacgtaaaa ataaatttaa agcattaatt
      421 tgcaattctt tttgtgcgag ttttagtttt ttagctgtaa aacgaaagaa aaaaacacct
      481 acaaaaacag ctaaaattac tgcgattaag gcatctctta taaaaacaaa ggctaaaaaa
      541 cctacaagta aggcttcgat aatgcttagg aattttaaga ttcctaagcg tttaagtata
      601 taaagtctat tattttctaa gctttttaaa tccattaaga ttttgctttt tccattcttt
      661 ttctttgagt tggatcaaga tagcgtttgc gaacacgcac atttacaggc gtaacttcta
      721 caagttcatc ttcttctatc cactctaaag ctctttcaag acttaatttt ctaggtggca
      781 caagcttgat tgcatcatcg cttccacttg ctcttacatt ggtaagattc tttcctttga
      841 taggattaac atctaaatca tttggacgag agtgctcacc tataatcata ccggtataaa
      901 ctttagtttg aggctctatg aaaagtactc cacgctcttg aaggttaaac aaagaatacc
      961 ctaaagccac gccattttcc atagaaatta acgctccatt attacgcttt tcaaccgcac
     1021 cgctaaaagg acggaattct aaaaagctat gattcatcac gccttcgcct ttggtatcag
     1081 ttaaaaactg acttctaaaa cctataagtc cgcgtgctgg aatttcaaac tcaagtcttg
     1141 tttgtccatc gcctgttggt gccatggttt tcatttcagc ttttcttttg ccaagttttt
     1201 ctattaccgc accactaaat tcttcaggca catcgataac taaatgttca aaaggttctg
     1261 ttttaactcc atcttcaact tttacgataa cttcaggtct tcccatgcaa aactcaaaac
     1321 cttcacgacg catattttca gctaaaatag tgatttgaag ttcgccccta ccgcttactt
     1381 taaatttacc ttcgcctgtg ctttcgtatt tcatagcaat attagttttc atttcagctt
     1441 ctaagcgttc agcgatttta tttgaagtta catgttttcc ttcagttcct gctaatgggc
     1501 catcatttac agaaaatact atacttaaag tcggctcttc aatgtgcaaa ggatcaagtg
     1561 gcataggatt gtttggatct acaacgctat cacccacatc taaagcttca aaacctgcta
     1621 tagctacgat atctccactt cctgcttctt caatatccat tttttctaag cccataaagc
     1681 caatgagttt tgaaattcta ccatttactt tggtgccatc agcttttgca agcattacgc
     1741 tttggttttt cttcacaacc ccattgaaaa ttctagcaat gcctatttta cctacaaaat
     1801 tatcataccc taaagtgaaa acttgaagtt gtaaaggatt gtcatttgtg ccacttggtg
     1861 ctggaacgcg ttcaagtatg gttttaaaaa gtggctccat attatcactt tcatcgttta
     1921 gatcaagctt agcataacca ttttttgctg cagcataaac tatggcaaag tcaagttgct
     1981 catcgtttgc atctagggct acaaaaagat caaaaatttc attgatcact ctttcaggat
     2041 cagcagctgg tttgtcgatt ttgttgatta caactatagg tttaagccct aaagataaag
     2101 cttttttaac cacgaattta gtttgtggca taacgccttc ttgagcatcc accaaaagca
     2161 aaactccatc aatcattttt aaaacgcgtt ctacttctcc gccaaaatca gcatgccctg
     2221 gagtatctat gatgttgatt tttgtacctt tgtaattgat cgctgtgttt tttgaaagta
     2281 tggtaatgcc acgttctttt tctatatcgt tgctatccat aacgcgttct gaaatttgtt
     2341 ctctttcgct aaaggtgcct gattgtttta ataattcatc taccatagtg gttttaccat
     2401 ggtcaacgtg agctataact gctatatttc taatgttttc caaattttct tctccaaagc
     2461 taaattttta aaagcttaga ttatacaaaa atttaactta aactacaaag catcaaaact
     2521 tggaacactt cttgctttaa agacttgtga aattaaaatt ttaaaaagga agttaaaatg
     2581 tcaaaaccat taaatgaaga gatttttatt gaatttaaaa gcgatttagc tgagagaaaa
     2641 aatgaa
//
LOCUS       DARBAC010000137         2344 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.137, whole genome shotgun sequence.
ACCESSION   DARBAC010000137 DARBAC010000000
VERSION     DARBAC010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.137"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            70..1095
                     /locus_tag="SB799_001615"
     CDS             70..1095
                     /locus_tag="SB799_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEG0868836.1"
                     /translation="MKVKSLLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGISTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
     gene            1189..>2344
                     /locus_tag="SB799_001616"
     CDS             1189..>2344
                     /locus_tag="SB799_001616"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEG0868837.1"
                     /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPANLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLTNLKIAEKKDL"
BASE COUNT          800 a          301 c          462 g          781 t
ORIGIN      
        1 tatttatttt tatttaagct ctaaatgatt attattttat tttaatttat ctttaatagg
       61 agtttataaa tgaaagtaaa atcattgcta atcgcatcct tagttgcttt ttcaagctta
      121 aatgctgcaa gtcttataga tgaagctaaa aattcaggtc ttgttgcctt accaaaagat
      181 caaaaaggcg ttgatgaaat tttaaaacaa aatggagtaa aggctagtga atttactctt
      241 gaaaaagcag agcttggcaa aaagctctat tttgaaccac gtctttcaaa aagtggtatc
      301 atttcttgta atacctgtca taatgtagga cttggtggaa cagatggaat cagtactgca
      361 ataggtcata aatggacagc aaatcctcat catttaaatt caccaacagt ttataatgca
      421 gttttaaata atactcaatt ttgggatggt cgtgcaggaa cattagccga tcaagctaaa
      481 ggtccaatcc aagctgatcc tgaaatggca actcctgcta aacttgcagt agaaaaaatt
      541 tcatctttgc ctgaatatgt gagtgagttt aaaaaaatct atggtaaaag cggtgtaaat
      601 tttgacaata ttgctgatgc aattgcaaat tttgaaagaa ctttgatcac tccatctcgt
      661 tttgataaat ttttagaagg cgatgaaaaa gctttaacaa aagaagaaca aaaaggctta
      721 aagcttttta tagataaagg ttgtgtagct tgtcataatg gtgtgaattt aggtggcaat
      781 atgcaagcgt ttgaagttgc tggtaaatat aaatttgcaa atttaggtga ttttaaaggt
      841 gatgcaaatg gcatggtaaa aactccaact ttaagaaatg ttgctgaaac tgctccatat
      901 tttcataatg gtgcgatttg gaatttaaaa gatgctatta aggaaatggg tagtgtgcaa
      961 cttggcatta aaatttctga taaagaagca aaaagtattg aaactttctt aaaatcttta
     1021 acaggaacaa aaccagcaat tgtttatcca caacttccta tttctactga aaaaactcct
     1081 aaacctgaac tataaggttc caaacaagct ctaattttag agcttgttta aatttcttta
     1141 tcttagcttt gttataattg tctttaaatt ttgctagaaa ggtttgcaat gaaacttttt
     1201 ggaactgatg gagttcgtgg aaaagcgggt gaatttttag atagtttttt ggctatgcgt
     1261 ttagcaatgg ctgcgggtat ttattttaaa gataaaagta ttactaataa tatcttagta
     1321 ggaaaagata caagaagaag cggctatatg atagaaaatg ctattgtttc agggcttact
     1381 tctatagggt ataatgttat acaaattggt cctatgccaa ctcctgcgat tgcattctta
     1441 actgaagata tgcgttgtga tgcagggatt atgatttcag cttctcacaa tccttattat
     1501 gataatggta ttaaattttt tgatgctcat ggaaataaac tcagtgaaga tatagagaaa
     1561 aaaatagaag aaatttattt tgatgataag cttatacaag cctctaaggt agatatggag
     1621 aaaattggtc aagcaaaaag aattgatgat gttataggaa ggtatattgt ttctattaaa
     1681 aattcttttc caaaagatct tactttaaag tctttgcgtg tggttttaga tgtggctcat
     1741 ggagcagctt ataaggtagc acctactgtt tttaaggaat taggtgctga agttatagta
     1801 atgagcgata aacccaatgg acttaatatc aatgaaaatt gtggagcttt acatcctgca
     1861 aatttagctg ctgaggtaaa gcgtttgcgt gcagatgtag gctttgcttt tgatggtgat
     1921 gcagatcgtt tggtggttgt agatgaaaaa ggcgaagtgg ctaatggaga tagtttatta
     1981 ggagttttag cactttatct taaagaacaa ggtaaattac aatcaagtgt tgtagccact
     2041 ataatgagta atggtgcttt aaaagaattt ttaaataaac atggcataga acttgatact
     2101 tgtaatgtgg gcgataaata tgtgcttgaa aaattaaaag ccaatggtgg aaattttggc
     2161 ggagagcaaa gtgggcatat tatttttagt gattatgcaa aaactggaga tggtttgata
     2221 gctgctttgc aatttagtgc tttaatgctt tctaagaaaa aatctgcaag ctctattttg
     2281 ggtcaagtca aaccttatcc tcagctttta accaatctta aaattgcaga aaaaaaagat
     2341 ttag
//
LOCUS       DARBAC010000138         2251 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.138, whole genome shotgun sequence.
ACCESSION   DARBAC010000138 DARBAC010000000
VERSION     DARBAC010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.138"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..144
                     /locus_tag="SB799_001617"
     CDS             <1..144
                     /locus_tag="SB799_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEG0868838.1"
                     /translation="KISDLEEKLHQSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGDK
                     NET"
     gene            134..1141
                     /gene="pyrC"
                     /locus_tag="SB799_001618"
     CDS             134..1141
                     /gene="pyrC"
                     /locus_tag="SB799_001618"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEG0868839.1"
                     /translation="MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPTLC
                     NLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPRDTKECCGCAAGVFSAPVILPVLAELFKQNSSEE
                     NLQKFLSDNTCKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLK
                     H"
     gene            complement(1166..1387)
                     /locus_tag="SB799_001619"
     CDS             complement(1166..1387)
                     /locus_tag="SB799_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868840.1"
                     /translation="MVKNLIIKFGRLILDAIAAISFVVALLYSLFMMFSIGFLAGLLS
                     LIVSFIALFLSFFVIYLVIDIRDALVNKA"
     gene            complement(1443..2162)
                     /locus_tag="SB799_001620"
     CDS             complement(1443..2162)
                     /locus_tag="SB799_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEG0868841.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLNISFQNKSIIDI
                     GCGTGVWTLHLAKEAKEILALDSANTMLEILQEDAKKLNLNNIKCENLSFETWMQNNP
                     NVKFDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKG
                     FYKKDLENYLLEKNIFFHKIVFDETRKVQRTKEEAIENALWHLSMNKITTSKEAVSSF
                     VENDIIETIESKIKLLIINNL"
BASE COUNT          827 a          308 c          313 g          803 t
ORIGIN      
        1 aaaatcagtg atcttgaaga aaaattacat caaagtaaac ctaccatcat cgctactttt
       61 aagtttttag aagaaaaaaa actttttaag cgtcttaaaa atggatttta tcagctaaat
      121 ataggagata aaaatgaaac ttaaaaatcc tttagatatg catttgcatt taagagataa
      181 tcaaatgtta gaacttattg cacctttgag tgcaagagat ttttgtgcag ctgtgattat
      241 gccaaattta atccctacac tttgcaattt agaagatcta aaagcttata aaatgcgtat
      301 ccttaaggct tgtaaagatg aaaatttcac tcctttaatg acactttttt ttaaaaatta
      361 tgatgagaaa tttctttaca gtgctaaaga tgaaattttt ggcattaagc tttatccagc
      421 aggaattaca acaaattcaa atggtggagt ttcaagtttt gatatagagt atttaaaacc
      481 tactttagag gctatgagtg atttaaatat tcctttgtta gtgcatggag aaaccaatga
      541 ttttgtaatg gacagggaaa gtaattttgc taaaatttat gaaaaattag ccaaacattt
      601 tccacgactt aagattgtta tggagcatat taccactaaa actttatgtg aacttttaaa
      661 agattatgaa aatttatacg cgacaatcac tttacatcat ttaatcatca ctttagatga
      721 tgttatcgga ggtaaaatga atcctcatct tttttgtaag cctatagcca agcgttacga
      781 agataaagaa gccctttgcg aacttgcttt tagtggttat gaaaaagtta tgtttggaag
      841 tgatagtgcg cctcacccaa gagatactaa agagtgttgc ggttgtgccg caggtgtatt
      901 tagcgcccca gtgattttac ctgttttagc tgaattattt aagcaaaata gctcagaaga
      961 aaatttgcaa aaatttttaa gcgataatac ttgtaaaatt tatgatttaa aatttaaaga
     1021 agataaaatt ttaactttag aagaaaaaga atggcaagta ccaaatgttt atgaagataa
     1081 atacaatcaa gtcgtgcctt atatggctgg agaaatttta aaatttcaat taaaacattg
     1141 atttcccacc ttaaagatgg aaaatttaag ctttatttac aagagcatct ctgatatcta
     1201 taacaagata gattacaaaa aaacttaaaa ataaagcaat aaaactgact atcagcgata
     1261 ataaaccagc taaaaatcca atgctaaaca tcataaaaag agaataaagc aaagctacaa
     1321 caaaacttat cgctgcaatt gcatcaagaa tcaagcgtcc aaatttgatg attaaatttt
     1381 taaccattaa aaactccttt gaaataatga gtgaaattgt aataaatatc agcttaatat
     1441 ttttataagt tatttataat taaaagtttt attttagatt ctatagtttc aataatatca
     1501 ttttcaacaa aagaacttac agcttcttta gaagttgtga ttttgttcat gcttaaatgc
     1561 catagagcat tttctatagc ctcttctttt gttctttgga ctttgcgtgt ttcatcaaaa
     1621 acaatcttat gaaaaaatat atttttttct agtaaataat tttctaaatc ttttttataa
     1681 aaacctttaa attcagtatt aaaatattta aaaatcggat ctaaaaaatc actttttcta
     1741 taatcagccc aaccaagata aatttttatt ttggctagat ttaagaaatt tgtataatct
     1801 ttttcatttt gtaaagcagg agacatactt aaaaatgcaa gatcaaattt aacattagga
     1861 ttgttttgca tccaagtttc aaagctcaaa ttttcgcatt ttatattgtt aagatttagt
     1921 tttttagcat cttcttgtaa aatttcaagc atagtatttg cactatctag ggctaaaatt
     1981 tctttagctt ctttagctaa gtgtaaagtc caaaccccag ttccacatcc tatatctata
     2041 atgcttttat tttgaaaaga aatatttaaa ttttgtaaat attcaaaagt ttgcttttgt
     2101 atggtgttta aagtgttttg atatcttgcg taagttttgg cctttttatc ccataaattc
     2161 atatattttc cttgataaaa tatataaaat catagcataa atttttaaaa ttcaagccct
     2221 ttttttgggc tcgaatgact aattaaaacc t
//
LOCUS       DARBAC010000139         2203 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.139, whole genome shotgun sequence.
ACCESSION   DARBAC010000139 DARBAC010000000
VERSION     DARBAC010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.139"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..668
                     /locus_tag="SB799_001621"
     CDS             <1..668
                     /locus_tag="SB799_001621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868842.1"
                     /translation="ISKNLTTPLPFFRAKKHMSEIVLKLVRMINTRHFDKNFNQIDFS
                     KIKNLLPYDARLSDNFFKQIDTKYEKIIGINAFSNNSEYRGFNFFIKDWIGLARQLSL
                     KYPKFLFILLNFSTNSIQYNIDQNANLKVFCNNKNIASLVSISQKLDFLITVDTGNLH
                     LCDILQIPTLAFTSSLAAYRFGGGSYGGRFDKLIVKPAWQKEYRKIYEIFTKKAENNL
                     ENL"
     gene            complement(693..2150)
                     /gene="dcuC"
                     /locus_tag="SB799_001622"
     CDS             complement(693..2150)
                     /gene="dcuC"
                     /locus_tag="SB799_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002877473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
                     /protein_id="HEG0868843.1"
                     /translation="MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYI
                     TGTPIPKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINAS
                     AKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKI
                     RPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAIL
                     IPFYFAWIDKRDKEKGVLNDEVEIPQIIDPRCPTFYILFPWLPVVFLFTAYFFTIKLD
                     VVTANFVSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGI
                     KALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLA
                     PDIATKLGVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLL
                     IAMLVNVLVAFYLAQTNPLPKEQNTTKIAVSLNNK"
BASE COUNT          833 a          322 c          325 g          723 t
ORIGIN      
        1 taatttctaa aaatttaacc acacctttac cattttttag agctaaaaaa catatgagtg
       61 aaattgtttt aaaattggtt aggatgatta atactaggca ttttgataaa aattttaatc
      121 aaattgattt ttctaaaatt aaaaatttat taccttatga tgcaagatta agtgataatt
      181 tttttaaaca aattgataca aaatatgaaa aaattatagg tattaatgct ttttcaaata
      241 atagcgaata tagaggattt aattttttta taaaagattg gatagggctt gcaaggcaac
      301 tttctttaaa atatcctaaa tttttattta tacttttaaa ttttagtacg aattctattc
      361 agtataatat tgatcagaat gcaaatttga aagttttctg taataataaa aatattgctt
      421 ctttggtaag tatttctcaa aagctagatt ttttaattac tgttgatact ggaaatttac
      481 atctttgtga tattttacaa attcctactt tggcttttac aagtagtctt gcagcttata
      541 gatttggagg tggaagttat ggaggtagat ttgataaatt gatagtaaaa ccagcttggc
      601 aaaaagaata tagaaaaatt tatgaaattt ttactaaaaa agcagaaaat aatttagaaa
      661 atttatagtt tttataaaat aataaatatt tattatttat tatttaaaga tactgctatt
      721 tttgtagtgt tttgttcttt tggcaaagga ttggtttgtg ctagataaaa ggctacgagt
      781 acatttacaa gcatagcgat aagcaaaaga ggagtggttc gttttataat atccattgga
      841 gctacttttg caaatccagc taaagctatg attccgcctg ctattggtga agctgcacga
      901 cctaaacaag atgcaatttc tataggtaaa actagagtaa taggtgcaac gcctaatttt
      961 gtagctatat caggagctag ttttccaaaa gcattaaaag cagcaattcc acttcccata
     1021 atcactgtgg caaaataaac taaaaagctt aaaatagcta tacttaaaag aattccaaac
     1081 catgcaaaat ttcctgttcc aagatttgaa accgcgttag caaggatatt aactccacca
     1141 agtgctttaa tgccttcagc aaatactcca gcagcgatga ttatgcttac gactgagata
     1201 aaaatttcag ccatagcttt taaaatcacc atcatatctt cgcctaattt tctagcattt
     1261 ctgtgtcttg caaattcaac aagaaaaact aaagaaatgc ttacaaaatt tgctgttaca
     1321 acatcgagct tgatagtaaa aaaatacgct gtaaataaaa atacaacagg taaccaagga
     1381 aagagtatgt aaaaagtagg gcatctagga tcaatgattt gcggaatttc aacttcatca
     1441 tttaaaacac ctttttcttt atctctttta tcaatccaag caaaataaaa aggaatcaag
     1501 atggcaataa ctacaacata ggcaatcaca ctataaattt ggtaatttaa aaaaagccct
     1561 acgacattat cactttgtcc taccatatct gccatattga ttgaatttcc atcttttgga
     1621 ccataatcaa gcgcaattaa agaaagcaca catacagctg taataggacg gattttaagt
     1681 gagattaaaa caggataaat acatgctaac aaaagcaaaa gcaatccagc atagctagaa
     1741 atgacgattt ttaaagccat tccaacaaca aaagttccac ttaaaatcaa gtatttattt
     1801 ttgatttttc ctaagggttt atttgccaaa aaagcaagtt ttgccgaagc attgatatgt
     1861 ttcatataag cagcaaaacc tgccacactc atgataataa gtcctactcc agaaagctga
     1921 cttttaaaag tcgctgtgat aaaagcataa ctatcaagta aaacattcaa aaagcttgca
     1981 tgttctctgc tcggggcttt tggtataggt gttcctgtga tgtaaaaagc aaaaataagc
     2041 aagataatac ctgaaagaaa aaatacaaaa ataggattgt attttttaag tatataataa
     2101 gcaacgacaa ttaccgctaa aagtgtagaa catatcataa aaattggcat gatttctcct
     2161 aaagttatta ttagctttta ttttatttta gctaaaattt aac
//
LOCUS       DARBAC010000140         2197 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.140, whole genome shotgun sequence.
ACCESSION   DARBAC010000140 DARBAC010000000
VERSION     DARBAC010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.140"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            13..276
                     /gene="rpsT"
                     /locus_tag="SB799_001623"
     CDS             13..276
                     /gene="rpsT"
                     /locus_tag="SB799_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEG0868844.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGDK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            295..1362
                     /gene="prfA"
                     /locus_tag="SB799_001624"
     CDS             295..1362
                     /gene="prfA"
                     /locus_tag="SB799_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEG0868845.1"
                     /translation="MLASKLDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(1376..2131)
                     /locus_tag="SB799_001625"
     CDS             complement(1376..2131)
                     /locus_tag="SB799_001625"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HEG0868846.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDTIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANAEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAAS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMFDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFPHKH"
BASE COUNT          811 a          373 c          341 g          672 t
ORIGIN      
        1 aggaaaatat aaatggcaaa ccataaatct gctgaaaaaa gagcaagaca aactattaaa
       61 aaaacagaaa gaaatagatt ctatagaaca agacttaaaa atataactaa agccgtaaga
      121 gaagctgcag caaatggaga taaaaatgct gctaatgaag ctttaaaagt agctaataaa
      181 agcattcatg ctatggtaag tcgcggtttc attaaaaaac aaactgcttc tcgccgtgta
      241 agccgcttag cccttttagt aaataaaatc gcataatttt ctatatagtt tttaatgtta
      301 gctagcaaac tagatccttt tttaaaacgc tttgaagagt taaattctct tcttagcagt
      361 tctgatatac tcaacgatat cagtaaaatg actacactct ctaaagaaca aaaaaattta
      421 gaacctatcg ttttaaaagc taaagagtat ttaaaaactt tagacaatat agaagaaaat
      481 aaagctttgc taaacgatcc agaacttggg gaacttgcaa aagaagaact aaaaacttta
      541 gaagaattaa aaccaaaact tgaagaagag attaaaattt tacttcttcc taaagatccc
      601 aatgatgaaa gaaatatttt tcttgaaatt cgtgcaggta caggtggcga tgaggcatct
      661 ttatttgtag gagatcttgt aaaagcttat gcaagatatg ctgaaaatcg cggctataaa
      721 cttgagattg taagctctag cgaaggaagt gtaggtggat ttaaagaaat catcatgctt
      781 gttaaaggaa caggggctta ttcaagactt aaatatgaag gtggaacgca ccgtgttcaa
      841 agagttcctc aaacagaatc ccaaggacgc gtgcatactt ctgctatcac cgtggcagta
      901 atgccagaag ttgatgatat agaaatcgaa atcaatccaa acgatcttaa agttgatgtg
      961 atgcgttctt ctggacatgg tggacaaagt gtaaatacta ctgattcagc tgttcgtatc
     1021 actcatatcc ctacaggtat agttgtagtc aatcaagatg gaaaaagcca acacaaaaat
     1081 aaagaaagtg cgatgaaagt cctaaaagca aggctttatg aaatgcaaga gagtgaaaga
     1141 ctagcaaaag aaagcgaagc aagaaaatca caagtaggaa gcggagatag aagcgaacgc
     1201 attcgcactt acaattttcc acaaaatcgt atcagcgatc atagaataaa tcttacttta
     1261 tatcgcttag atgccattat gcaagatggg ctttttgatg aaatcataga acctttaatc
     1321 actcatcatc aagcccaagc tttacaagaa caaaatttat aagattttat acaaattaat
     1381 gcttatgtgg gaatttatgt ggatttccac tagcacctac atgtgcaaca tttccatttt
     1441 ctatatcata agcttgacca aaacctttta caaagcgtcc ttttttaaat tcaagcttta
     1501 ctagatgaaa atcaaacatc ttgcgtatag ttttaatgcc tccttctcct ccggtttgtt
     1561 tttcaaactc atcataaatt tgatcaaatc tttcacctct ctctaaaaag cttgcattta
     1621 ctctatagcg caatcttttg cgaagtataa cagaagcagc tttactctca tcctctaaaa
     1681 acattatttc tatattgttt ggatttactt tgatgttgtt aaaatgttca cttacttcac
     1741 ttatataaat ataatttccc cattgtgtgc ttacaaaagg tgcatacgag caaacaactt
     1801 ctgcatttgc atttaaagtt gccaaagcta cagaattaaa acttagcata aattcattta
     1861 attctttttc tacgccacta aaattttgct cgctctttgc actcatgcaa agggatatta
     1921 tagtatcttt aatcgtgttt tcatcggctt ttttaggaaa ttccactcgt aaattttctt
     1981 tatcattgta aacaagatcc aagccattaa aatcaacact ttttagaaaa acatcttgca
     2041 cttgctcaat accaccaaat tttttacaaa gatcaactaa atttgattta tgatgatcat
     2101 tcatatgaga aataatgctt tcaaaattca tttttatcct ttcttgattt taaaataaaa
     2161 tattaaaaaa aatggtatca attatcaaat taaaaat
//
LOCUS       DARBAC010000141         2069 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.141, whole genome shotgun sequence.
ACCESSION   DARBAC010000141 DARBAC010000000
VERSION     DARBAC010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.141"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            112..2043
                     /locus_tag="SB799_001626"
     CDS             112..2043
                     /locus_tag="SB799_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEG0868847.1"
                     /translation="MALIDLIEASKKFGDKIVLNEANFSANEGEKIAIIGKNGEGKST
                     FLKTLLGTLPLDSGRVIRQNGKSIAMLSQSVDFNANLSVKEAIKQELEEIYNALEEYE
                     ILHKKLEEDPSNKDYLKKIDTLMTLIDSKDAWNIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFEL
                     KNISKNINNKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDCGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFEGDGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
BASE COUNT          827 a          237 c          371 g          634 t
ORIGIN      
        1 ggactttttt tagtaaagaa aattttaaat atacataaaa gttatcttga aatttctagc
       61 actttaggct atggttctag ttttagcttt aaactcagtc aaggataaaa aatggctctt
      121 atagatttaa ttgaagcttc aaaaaaattt ggagacaaaa tagttttaaa tgaagcaaat
      181 tttagtgcaa acgagggaga aaagattgct attataggga aaaatggaga aggaaaatct
      241 acttttttaa aaacgctttt aggcacactt cctttagata gcggtagagt aataagacaa
      301 aatggaaaaa gcatagccat gctttcacaa agcgttgatt ttaacgcaaa tttaagtgta
      361 aaagaagcta tcaagcaaga gcttgaagaa atttacaatg ctttagaaga atatgaaata
      421 ctgcataaaa aattagaaga agatcctagt aataaagatt atcttaaaaa aatagataca
      481 cttatgactt tgattgatag taaagatgct tggaatatag aatctaaaat aatacgcgtt
      541 ttaaaagaat ttagtttgct tgagtatgaa aatcgcatta tatctacttt aagtggcgga
      601 gaaatacgcc gcgttgggct ttgcatactt ttactaaaaa atcctgatat tttattgctt
      661 gatgaaccaa ctaatcattt agatgtatat atgacaagct ttttggaaga attgctaaaa
      721 aattcaaaga tgtgtgtgat ttttatttcc catgatagat attttattga cgctatagca
      781 cacaagtgtg tagaagtaga gcagggtaaa cttagtattt ttaaaggcgg atatgcaaac
      841 tatttagaga aaaaaacaca aattttacaa agccttgcta agagccatga aactctttta
      901 aagcaattaa aaagcgaaga agaatggctt agaagagggg ttaaagcaag acttaaaaga
      961 aatgaaggac gaaaagaacg catttttaaa atgcgtgaag aagcgaaaaa aaatcctgga
     1021 gcaatcaaac gcttaaaact tgaaatttca agagcggctt taaattttaa tggagaaaaa
     1081 acgatcaatc gtaaaaaaat gctttttgag cttaaaaata taagcaaaaa tataaacaat
     1141 aaaaatcttt ttaaagattt ttcaacgcgt attttacaag gtgaacgtat agctatcgta
     1201 ggaagaaatg gttgcgggaa atcaacattg ttaaaaattc ttctagggca aataaaacaa
     1261 gattgcggtg aaataaaacg cggagagctt aagataggat attttgatca ggctagaagc
     1321 ttggtaaatt ctgataaaag cttgcttgaa attttttgtc ccaatggtgg agatagggtt
     1381 gaagttcgcg gtaaaaatat gcatgtttat ggatatttga aaaatttttt atttcctaag
     1441 gaatttttag ataaaagcgt ggctctttta agcggtggag agaaaaatcg cgttgcttta
     1501 gccttgcttt ttactaaaga atatgatgtt ttgattttag atgagccaac taatgatctt
     1561 gatatagcta cgattaatat attagaagaa tatttactta gttttgaagg ggctattttg
     1621 ctagtatcgc acgatagata ctttgttgat aaaatcgcaa caaaacttta tgcttttgag
     1681 ggagatggat atataaatat tttacacact ctttacactg aatatcttga aaatgaaaaa
     1741 gaaattgaag aattggataa ttttgcttta gaacttcaaa cccaagagca aaataataac
     1801 caaaaagaaa aaagctctaa aaaattaagc tacaaagaaa atgagatatt aaaaaaccat
     1861 cctgaaaaaa tagatttttt agagcaaaag atagctaaat taaatcaaga tttatccgat
     1921 ccaaatgtat atcaagaaat aggtattaac aagctttatc aagaacttga agtaatgcaa
     1981 aaagaacttg aaattctaga aaatgagtat tttttagtat tagagaaaag cgagaattta
     2041 taattaaaaa gattttatat ttttttact
//
LOCUS       DARBAC010000142         2026 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.142, whole genome shotgun sequence.
ACCESSION   DARBAC010000142 DARBAC010000000
VERSION     DARBAC010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.142"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            93..518
                     /gene="rplM"
                     /locus_tag="SB799_001627"
     CDS             93..518
                     /gene="rplM"
                     /locus_tag="SB799_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEG0868848.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            521..910
                     /gene="rpsI"
                     /locus_tag="SB799_001628"
     CDS             521..910
                     /gene="rpsI"
                     /locus_tag="SB799_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEG0868849.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            1035..1994
                     /gene="cadF"
                     /locus_tag="SB799_001629"
     CDS             1035..1994
                     /gene="cadF"
                     /locus_tag="SB799_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HEG0868850.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRPAPQTKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
BASE COUNT          732 a          259 c          392 g          643 t
ORIGIN      
        1 gaaatataaa ctttattttt acttaaatta agtaaaaatt aatattattt tttatacaat
       61 cacattttaa atttttggca aaggtaaaaa ttatgacaaa gataacaaag ccaaacgaag
      121 taaaacgaga atggattgtt ttagacgcag aaggcaaacg ctttggtcgt cttttaactg
      181 aagtagcaac aattttgaga ggtaaaaaca agccttgctt tactccaaat gttgattgtg
      241 gtgattatgt aattatcatc aatgcttcaa aagctgtatt tacaggtgct aataaagcag
      301 aagataagct ttatcataga cattcaggat attttggaag tgtaaaaagc gaaaaatttg
      361 gtgatttact tgaaaaaaat cctgcaaaat tatataaatt agcagttaga ggtatgcttc
      421 ctaaaacaaa tttgggcaga gctatgctta aaaaattaaa aatctatgcg ggtagtgagc
      481 acccacacac tgcgcaaatt gctaaagaag gaaaataatc atggcaacaa catacgcaac
      541 aggtaagaga aaaactgcta tcgcaaaggt atgggtaaaa ccaggtagtg gtaaaattag
      601 tgttaatggt gttgatttaa acacttggct tggtggacac gaggcgatta agcttaaagt
      661 ggttcaacct ttacttgtga ctaaacaaga aacttcaatg gatattaaag caactacttt
      721 aggcgggggc tatagtgctc aagctgaagc tttaaggcat ggaatttcaa gagctttagc
      781 agctatggat gctgatttta gagccttatt aaaacctaaa ggacttctta ctagagatag
      841 tagaactgtt gagcgtaaaa aatatggacg ccgcaaagca agaagaagtc cgcaattctc
      901 taaacgttaa tatttttggt gggattttcc cacctttcta caatttttta taaaactcat
      961 ccttttttct gtcatttatg atataattgc aaaatttaaa tttttatttt ataacacaat
     1021 gaaaggtttt ttctatgaaa aaaatattct tatgtttagg tttggcaagt gttttattcg
     1081 gtgctgataa caatgtaaaa tttgaaatca ctccaacttt aaactataat tactttgaag
     1141 gtaatttaga tatggataat cgttatgcac cagggattag acttggttat cattttgacg
     1201 atttttggct tgatcaatta gaatttgggt tagagcatta ttctgatgtt aaatatacaa
     1261 atacaaataa aactacagat attacaagaa cttatttgag tgctattaaa ggtattgatg
     1321 tgggtgagaa attttatttc tatggtttag caggtggagg atatgaagat ttttcaaatg
     1381 ctgcttatga taataaaagc ggtggatttg gacattatgg cgcgggtgta aaattccgtc
     1441 ttagtgattc tttggcttta agacttgaaa ctagagatca aattaatttt aatcatgcaa
     1501 accataattg ggtttcaact ttaggtatta gttttggttt tggtggcaaa aaggaaaaag
     1561 ctgtagaaga agttgctgat actcgtccag ctccacaaac aaaatgtcct gtagagccaa
     1621 gagaaggtgc tttgttagat gaaaatggtt gcgaaaaaac tatttctttg gaaggtcatt
     1681 ttggttttga taaaactact ataaatccaa cttttcaaga aaaaatcaaa gaaattgcaa
     1741 aagttttaga tgaaaatgaa agatatgata ctattcttga aggacataca gataatatcg
     1801 gttcaagagc ttataatcaa aagctttctg aaagacgtgc taaaagtgtt gctaatgaac
     1861 ttgaaaaata tggtgtagaa aaaagtcgca tcaaaacagt aggttatggt caagataatc
     1921 ctcgctcaag caatgacact aaagaaggta gagcggataa tagaagagtg gatgctaaat
     1981 ttattttaag ataatgaata aaactatttt atttgattta gatggc
//
LOCUS       DARBAC010000143         2015 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.143, whole genome shotgun sequence.
ACCESSION   DARBAC010000143 DARBAC010000000
VERSION     DARBAC010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.143"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            21..203
                     /locus_tag="SB799_001630"
     CDS             21..203
                     /locus_tag="SB799_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868851.1"
                     /translation="MKKVVLISALLGAFAANVFAANTPSDVNQTHTKAHHSKAKADKK
                     HEAKTHKKTKEQTPAQ"
     gene            complement(339..413)
                     /locus_tag="SB799_001631"
     tRNA            complement(339..413)
                     /locus_tag="SB799_001631"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(378..380),aa:Glu,seq:ttc)
     gene            561..1124
                     /locus_tag="SB799_001632"
     CDS             561..1124
                     /locus_tag="SB799_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEG0868852.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKIGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
     gene            complement(1110..1979)
                     /gene="miaA"
                     /locus_tag="SB799_001633"
     CDS             complement(1110..1979)
                     /gene="miaA"
                     /locus_tag="SB799_001633"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEG0868853.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFDAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFD
                     HKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALAILRMKFSIEK"
BASE COUNT          693 a          285 c          257 g          780 t
ORIGIN      
        1 ttattcataa ggaggaaaat atgaaaaaag ttgtactaat ctcagcatta ctaggtgctt
       61 tcgcagctaa tgtttttgca gctaatactc caagcgatgt gaatcaaaca catacaaaag
      121 ctcatcattc aaaagctaaa gctgataaaa aacatgaagc taaaactcac aaaaaaacaa
      181 aagagcaaac accagctcaa taatgcccag ccttgatata agtctataat agacttatat
      241 caaaagctat tcgtattcta caaaataaat tattaatatt tattaaattt taatagaaaa
      301 aatgaaaaaa tcgttatttt aaaagaaaaa ttaaaaagtg gtgacccata cgagactcga
      361 actcgtgtta ccgccgtgaa agggcgatgt cctaaccgct agacgaatgg gccactttta
      421 aggagtaaaa aataaaaatg aaattgaatt atatatattt atttcttaaa atttaattaa
      481 atatatcaaa attatgtgat ttttatcttt gtttgattat aatttcatct tcaatttttt
      541 ataaaatttt aggatttatt atggattttt atagtcttat ttttttatcc tgtgctttag
      601 gaatggatgc ttttgctgta tcactatgca aaggttttag tgttaaaaaa ctacatttaa
      661 aacattatct tattgttgga atttattttg gtggatttca agccttgatg ccaactattg
      721 gttattttat aggcataact tttgcatctt ttattgcgag tattgatcat tggatagctt
      781 ttattttact ttctttaata ggattaaaaa tgatcaaaga gtcattggaa aatgaaaatt
      841 gcgatagtaa tgccaatcaa tttggcttta aaaccatgct agctttagca attgctacga
      901 gtatcgatgc actagcagtt ggtgtgagtt ttgcattttt aaatgtaaat ttattattag
      961 ctatattttt aataggtatt atcaccttca ttttatgcat cattgctcta aaaataggaa
     1021 ataaatttgg aatttatctt aaaaataaag ctgaactttt aggcggattg gttttaatta
     1081 tattaggagt aaaaattcta atagaacatt tatttttcga ttgaaaattt cattcttaaa
     1141 atagctaaag ctttatcaaa ttccaaggct ttactttgaa attttttatt aaaagttctt
     1201 tgtcttttgg caagttgtgt agtatgtatc gtgattaaat tttcaagctc tttaaaggaa
     1261 atttctccat ctaaatattc tttacactct ttcaaaccta tagaatttaa tgctttaagt
     1321 ttatgatcaa atttagaaaa aagaattttt gcttcatcta aaagtccatt atcaagcatt
     1381 tcttttgttc tagttttaat acgttttttt aaaatttctt tatcccatgc aagctcataa
     1441 atttctatat ctttaagcac cccagttttt tgtgttcttt ttaaaaattc actaggaatt
     1501 tctcttgttt gttcataaat acccagccat ttttttaatc tataagtatc atttttttct
     1561 attttatagt ttggatcaat atttaataaa agagcataaa tttcatcgtt atttaaagaa
     1621 ctctttgact ctaaggtttt ttcacttaaa ccatctatca tagtttttaa ataaaatcca
     1681 gttccaccta ctataattag aggtaaattt ctagctaaag caaattcttt tgctttttga
     1741 tattctctta tgaataactc aacattaaaa tgttcattca cgctcaataa atttacccca
     1801 aagtatttta tactcgcaag atcatcttgt gaaggcttgg cacttgctat attaatctct
     1861 ttataaacac aaagactatc aagacttaaa acaacagcat caaattctct tgctaaagta
     1921 ttggctatgt atgtttttcc actcgcggtt gttcctatta atgctatttc aaaaaacatt
     1981 ttaatattta tcctaaaatt tataaaaatt ttagt
//
LOCUS       DARBAC010000144         2005 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.144, whole genome shotgun sequence.
ACCESSION   DARBAC010000144 DARBAC010000000
VERSION     DARBAC010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.144"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..274)
                     /locus_tag="SB799_001634"
     CDS             complement(<1..274)
                     /locus_tag="SB799_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868854.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSL"
     gene            complement(274..1212)
                     /gene="rsmH"
                     /locus_tag="SB799_001635"
     CDS             complement(274..1212)
                     /gene="rsmH"
                     /locus_tag="SB799_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEG0868855.1"
                     /translation="MILEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKN
                     HPDLKFIACDQDQQALEFSKKRLKDFHNRITFIQSNFSEVLEKISYKEELRGILADIG
                     VSSFQLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAH
                     FIAEKICLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKD
                     FLGHLENLKPKNCILAIISFHSLEDRIVKNFFKKWSKNCICDEKIMRCECGNNHSLGQ
                     IITKKAISASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            1371..>2005
                     /locus_tag="SB799_001636"
     CDS             1371..>2005
                     /locus_tag="SB799_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEG0868856.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENEILQKLANTREFQDPTGDFNKTIYYELLNANNLTPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLK"
BASE COUNT          688 a          284 c          274 g          759 t
ORIGIN      
        1 caagagattg cttttcttct aatttaacat tgatcagatc ttcttttaaa tatatatttg
       61 attttttagt atgttttgac tcatactctt catcgagttc ttctaagaat ttattaggag
      121 tctttttttt aaaacgacgt cttaaaatat catcgctaga aatttcatct cttaaatcat
      181 catcaagcgg tttgccttga tttatagcgc gagaaaattt cagcattttt tggcgtatgt
      241 tttggcgttc ttttataaaa tcatcttcta gcattattta ttgtccaaat tattaaaata
      301 aaaagcccgc attttagcac aactagagcg agaatttttt aaaagttctt ccttgcttgc
      361 acttatagct tttttggtta ttatttgccc taggctatgg ttatttccac attcgcaacg
      421 cattattttt tcatcacaaa tgcagttttt tgaccatttt ttgaaaaaat tttttactat
      481 tctatcttcc aaagaatgaa aactaatgat tgctaaaatg caattttttg gttttaaatt
      541 ttctaaatgc ccaagaaaat ctttaagcac tttaagttct tgatttactt ctattctaat
      601 ggcttgaaat gctaaagtgg ctttggaaat ttttctatga ttttgtttgc cttttcctat
      661 gatttgataa agttccttgg cgcttttgat tggattttta cttctttcta ggcaaatttt
      721 ttcagcaata aaatgtgcat cgtgcaattc tccataatct ttaaaaatgg aagttaattg
      781 ctcttttgta taagtattaa taatctcata agccgatatt ttggagtttt gattcattct
      841 catatccaaa aagtcagaat ttacactaaa acctctttcg ttattatcaa gttgaaatga
      901 agaaactcca atgtctgcta aaatacctct taattcttct ttatatgaaa ttttttctaa
      961 aacttcacta aaattacttt gtataaaagt tatcctattg tgaaaatctt taagacgttt
     1021 tttagaaaat tctaaagctt gttgatcttg atcacaagca atgaatttaa gatcaggatg
     1081 atttttaagc aaagcttcac tatgtccgcc aaatcctaaa gtgcagtcta aaaaataacc
     1141 tgttttaaga tttttaaaaa tctcttgaac ttcattaagc aaaactggga tatgaggaat
     1201 ttccaaaatc aatcctaata aatttttata aactataatt ataactaaat ttcattgtaa
     1261 aaatcataaa atttaaagaa caaatatttt ttggtaaaaa ttttataatt aaactccact
     1321 taaacacttc tacgatacaa tatctagttt aaatttaatc aaggaatgat atgcttactt
     1381 ggatgcaaca tcacaaaaaa tatcttgttg ttactatatg ggttagtact atagcttttg
     1441 ttggcgctgg ctttttaggt tggggtgctt atgattttaa tctcaataga agttcgagtg
     1501 ttgcaaccgt aggaaatgaa aagataggtt ttagcgaatt tgatactaga tatagacaaa
     1561 ttttaagtta ttataatcaa attagcaatg gtgctttaac tccagaaaat gctgagcaac
     1621 taggcattaa aaatatagct ttaagctccc ttgttgaaga taagcttttg ttaaattttg
     1681 ccaaagattt gggtattggc gtaaacgaga atgaaatttt acaaaaactt gcaaatacta
     1741 gagaatttca agatcctaca ggggatttta acaaaacaat ttattatgaa cttttaaatg
     1801 ccaataattt aactccaaaa gattatgaaa cacaacttgc aaatgaagta attaccgata
     1861 aacttaatca aatttttaat attcctagca aagatgaaga attaaaaatg ttagcttcta
     1921 gttatttcat gcaagatgct ttaagtattg caaaaattga ttatgacaaa aaaaatatta
     1981 agattaatga agaggattta aaaaa
//
LOCUS       DARBAC010000145         1972 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.145, whole genome shotgun sequence.
ACCESSION   DARBAC010000145 DARBAC010000000
VERSION     DARBAC010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.145"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            60..722
                     /gene="sodB"
                     /locus_tag="SB799_001637"
     CDS             60..722
                     /gene="sodB"
                     /locus_tag="SB799_001637"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HEG0868857.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            complement(750..1955)
                     /locus_tag="SB799_001638"
     CDS             complement(750..1955)
                     /locus_tag="SB799_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HEG0868858.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     AFIKERLGVQIETAQIDADDSNAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGID
                     YVDTANYEHPDLAKFEYKEQWARNDEFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVM
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
BASE COUNT          620 a          377 c          301 g          674 t
ORIGIN      
        1 tctttttaat attattatgg taatattttc aatatcaaac taaaaataaa ggagaaatta
       61 tgtttgaatt aagaaaatta ccttatgata ccaatgcttt tggtgatttt ttgagtgctg
      121 aaacttttag ctatcatcat ggaaaacatc acaatactta tgttacaaat ctaaataatc
      181 ttattaaaga tactgaattt gcaggtaaag atcttgtaag tattatcaaa acttcaaatg
      241 ggggcgtatt taataacgca gctcaagttt ataatcatga tttttatttt gattgcatta
      301 agccaagtac aggctgtggc tgtggcggtt catgtcaaag tatagatgct aatttacaag
      361 cggcactaga aaaagaattt ggatctttag aaaatttcaa agctgaattc atcaaaggtg
      421 ctacaggagt ttttggttca ggatggtttt ggttagttta taatactaaa aatcaaaaac
      481 tagaatttgt aggtacttca aacgcagcta caccaattac tgaagataaa gttcctttgc
      541 ttgttgtaga tgtttgggaa catgcttatt atgtagatca tcgtaatgca cgccctgctt
      601 atttagagaa attctatgct catattaatt gggaatttgt tgcaaaagct tacgaatggg
      661 ctttaaaaga aggcatggga tcagttagct tttatgcaaa tgaacttcac cctgtaaaat
      721 aatttaaagg catcaaaacg atgccttttt tactctccta aactcggagt catttcgata
      781 atcttccaag gaagtccttg agaattcagc tcttccataa aaggcttagc gtcaaattct
      841 tccatattaa acacgccttt tccttgccaa attcctttag cgattaattt cgtacctatc
      901 atagcaggaa cacctgtagt atagctcaca gcttgtgcgc cagtttcttt gtaacattct
      961 tcatgattgc aaacattata aatataaact tgcttgtctt ttccatcttt tttaccacga
     1021 atcacacaac ctatattggt ataaccttta gtgcgtggcc ccaaactcgc aggatcagga
     1081 agcaaggttt ttaaaaattc tataggaatg atttcttttc cttggtgcat cacaggttta
     1141 atccctagca ttccaacatt ttcaaggcat ttcatatgag ttaaataact ttgtccaaag
     1201 gtcataaaaa agcgtattct ttttaaacct ttgatatttt ttaccaagct ttcaagttct
     1261 tcatgataaa gcaaatagct atcttttacg cctacttctg gataatccca ctccattttt
     1321 atttccatcg gctgcgtttc tatccacttg ccattttccc aataacgccc tttagcagaa
     1381 acctcacgta gattgatttc agggttgaaa ttggtcgcaa aagcatagcc atgatcacct
     1441 gcattgcaat ctaaaatatc tatataagaa atttcatcaa ataaattttg ctgtgcataa
     1501 gcacaaaaaa cattagttac accaggatca aatccacttc ctaaaagtcc taaaattcct
     1561 gcttgtttaa actcgtcatt tctcgcccat tgctctttgt attcaaattt agctaaatca
     1621 ggatgctcgt aatttgccgt atctacataa tcaatccctg cttttataca agcatccatt
     1681 aaactcaaat cttgataagg caaagcaaca ttgagtaaaa tttgcgctcc tgttttcttg
     1741 ataagttcta caaccgcatt gctatcatca gcatcaattt gcgccgtttc aatttgaacc
     1801 cctaaacgct ctttgataaa agcagcgatt tcatcacatt tgctttttgt tctactagct
     1861 aaagtgattt tgctaaaagt atcagaattc attgcgcatt ttacagtagc cacacgactt
     1921 accccacctg cgcctatgat taaaagattt ttcatgaaat ttgtccttaa aa
//
LOCUS       DARBAC010000146         1971 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.146, whole genome shotgun sequence.
ACCESSION   DARBAC010000146 DARBAC010000000
VERSION     DARBAC010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.146"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1938)
                     /locus_tag="SB799_001639"
     CDS             complement(<1..1938)
                     /locus_tag="SB799_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEG0868859.1"
                     /translation="MFLYKKNLKINKDDLFFGWGRKKSGLKAMNLAKKYNTKFILLED
                     GFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLLNTYEFKGEEIKQAKEAIEL
                     IKKYKISKYNNNLDIPDDYFQKDEKRVLIIAQTANDASLEFGLAKDFKTVDMIKDAIK
                     ENPDSKIYIKIHPDVLSGKKQSDLDINSLPKECILISENFNPIALLEFFDKVYTKTSG
                     MGFEALIQECECVCYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYSEYFNP
                     YLNQKSNIFDTIQTLAKYKSIEKANSNRLFMLGFTLWKRYFIKPFFKAKNNEIIFLNS
                     IKSLARYKLKEDDKFFIWGKKYDENTLKNLLLVKAKEQNLTSFTPKVSLVEDGFIRSI
                     SLGSDLARPFSLIVDDKGLYIDPNKVSKLEELLQNEIFDKNMLNRAKNIIKTLLENRF
                     SKYNGLKHEDLKINAKIGQKVILIPAQVEDDASMILGGFGLSTLDLLKEVRSKNQDAY
                     IIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDAL
                     LRAKKVFTYGMPFYAGWGLTKDKYRCERRTRKLSLEELVAGALITYPRYINPKTKTLC
                     EIEVCLDIMLNLQKAYFSKKYI"
BASE COUNT          666 a          316 c          246 g          743 t
ORIGIN      
        1 tatatatttt tttgaaaaat aagctttttg taaatttagc attatatcta aacaaacttc
       61 aatttcacat aaagtttttg ttttaggatt tatatatctt ggatatgtga tcaaagcacc
      121 tgctacaagc tcttctaggc ttagttttct tgttcttctt tcgcatctat atttatcttt
      181 tgttaaaccc cagcccgcat aaaaaggcat gccataagta aaaacttttt tagctcttaa
      241 aagagcatca aaaccacttg tagaagtaat agtgtgaatt tcatcagcaa tttttatagc
      301 actatcaata ctgcaatctt ttacaatctc atcacaaaat tccaagatga gtgtttcatc
      361 ttttaaacct acacggttgc cgcttaacac atcaggatgg ggtttaaaga tgatataagc
      421 atcttgattt ttagaacgta cctccttaag caaatcaaga gtagataagc caaaacctcc
      481 taaaatcatc gaagcatcat cttcaacttg agcggggatt aaaataacct tttgtcctat
      541 tttggcattg atttttaagt cttcatgctt taaaccatta tattttgaaa agcggttctc
      601 aagtaaggtt tttataatat tttttgccct atttagcata tttttatcaa aaatttcatt
      661 ttgcaaaagt tcttctaatt tgcttacttt atttggatct atgtaaagtc ctttatcatc
      721 aacgattaaa gaaaaagggc gcgcaagatc agaacctagt gaaattgagc ggataaaacc
      781 atcttccact aaagaaactt taggggtaaa actagttaaa ttttgctctt ttgcctttac
      841 taaaagcaaa tttttaagag tattttcatc atatttttta ccccaaataa agaatttatc
      901 atcttcttta agcttgtatc tagctaaaga tttaatagaa tttaaaaaaa taatttcatt
      961 atttttagcc ttaaaaaaag gcttgataaa ataccttttc cataaggtaa agcctagcat
     1021 aaaaagtcta ttagaatttg ccttttctat gcttttatat tttgctaaag tttgaatagt
     1081 atcaaaaata ttactttttt gatttaaata aggattaaaa tactcgctat aaagtatata
     1141 agcagcatag aaaacttctt ctaaacttct tttttgcatc cttcttttac actctaattt
     1201 atcttttgtt agaccccaac ctgcataaaa tggcatgcca taacaaacac actcgcattc
     1261 ttgtatcaaa gcttcaaaac ccataccaga agttttagta taaaccttat caaaaaactc
     1321 aagcaaggct atgggattaa aattttcact gattaaaata cattctttag gtaaggaatt
     1381 tatatctaaa tcactttgtt ttttaccact taaaacatca ggatggattt ttatataaat
     1441 tttagaatca ggattttctt ttatggcatc ttttatcata tcgacagttt taaaatcttt
     1501 agcaagccca aattcaagag aggcatcatt ggccgtttga gcaataatta aaacacgttt
     1561 ttcatctttt tgaaaataat catctgggat atcaagattg ttattatact tgctaatttt
     1621 atattttttg ataagctcta tagcttcttt agcttgcttg atttcttcac ctttaaattc
     1681 ataagtattt aaaagatttt caagttttga aggcattgtt gcatcataat aaatgcctat
     1741 atcatcttta accatagaaa aacttgggct attttcaacc cctaagttta atgagcggat
     1801 aaatccatct tctaaaagta tgaatttagt attatatttt ttagctaaat tcatagcttt
     1861 taaacctgat tttttacgtc cccagccaaa gaaaagatca tctttgttga tttttaaatt
     1921 tttcttatat aaaaaaatgg tataaaaatt tttaacatta gtgataagtt t
//
LOCUS       DARBAC010000147         1964 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.147, whole genome shotgun sequence.
ACCESSION   DARBAC010000147 DARBAC010000000
VERSION     DARBAC010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.147"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..661)
                     /locus_tag="SB799_001640"
     CDS             complement(<1..661)
                     /locus_tag="SB799_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002794374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEG0868860.1"
                     /translation="MIKFLDLKQINDRFNTEFITKFKEILESGWYILGKQCEKFENNF
                     AKYCGVKHCIGVANGLDALRLIIKAYNFKENDEIIVPANTYIASILAITDNKCKPILI
                     EPDINTYNINPDLIEEKITKKTKAIMVVHLYGQVCDMEKIQLLANKYNLKIIEDCAQA
                     HGAIYKDKRVGNLGDAAGFSFYPGKNLGALGDAGCICTNDDNFASKIRALANYGSHKK
                     YE"
     gene            complement(658..1734)
                     /locus_tag="SB799_001641"
     CDS             complement(658..1734)
                     /locus_tag="SB799_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002876186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEG0868861.1"
                     /translation="MAKISILTPCFNHEKYVSYFLQSVLEQSFSDFELIIVDDCSSDN
                     STKEIQKFKDPKIKLIKHEFNKGINATLNTAFENSNGEYIVFCASDDILEKNALEIIY
                     KTFKDNDIIAVYPNLICIDENNEILGNLYPLKQRNKVELLYYLFMRYNCLTSVGLSLK
                     RDVFEKLYPLPNSMCNYQDMKMHIDILNIGEIKILETQLIRYRRTRDKTNISAHNSIT
                     TTRENLETEMLLDTYLKFDNIFLLEQIFHKEVNKTNIKPYQETLPFFLGIMALESDNI
                     YKKYWGYHKIMEFYKNDANAKILYEKYNFTFKDYLQLAKKCDTGDIFIKKYRKYKKMF
                     NYTALLLGIIVFILIFNFIIMEIK"
BASE COUNT          655 a          271 c          210 g          828 t
ORIGIN      
        1 tttcatattt tttatgagag ccatagtttg ctaaagctct aattttagat gcaaaattat
       61 catcattggt gcaaatacac ccagcatccc ctaaagcacc taaattttta ccagggtaaa
      121 aagaaaaacc ggcggcatct cccaaatttc caactcgttt atctttataa atagcgccat
      181 gtgcttgagc acaatcttct ataattttta aattgtattt attagctaac aactgaattt
      241 tttccatatc acaaacttga ccataaagat gaacaaccat gatagcttta gttttttttg
      301 tgatcttttc ttctattaaa tcaggattta tgttgtaagt attgatatca ggctctatca
      361 gtataggttt gcatttatta tcagttatag ctaaaattga tgctatgtat gtatttgcgg
      421 gaactatgat ttcgtcattt tctttaaaat tataagcttt tatgatcaat cttaaagcat
      481 caagcccatt tgcaacgcct atgcaatgtt taaccccaca atattttgca aaattatttt
      541 caaatttttc acattgcttt ccaagtatat accaaccact ttctagaatt tctttaaatt
      601 ttgttataaa ttcagtatta aatctatcat ttatttgttt taagtctaaa aattttatca
      661 tttgatttcc attattataa aattaaaaat taaaataaat acaattatac ctaataataa
      721 agctgtataa ttaaacattt ttttatattt tctatatttt tttataaaaa tatcccctgt
      781 atcgcatttt tttgctaatt gtagatagtc tttaaatgta aaattatatt tttcatataa
      841 aattttagca ttggcatcat ttttataaaa ttccattatt ttatgataac cccaatattt
      901 tttatatatg ttgtcagatt ctaaagccat tattcctaaa aaaaaaggca atgtctcttg
      961 ataaggtttt atatttgttt tatttacttc tttatgaaaa atttgctcta ataaaaatat
     1021 attatcaaat tttaagtaag tatctaagag catttctgtt tctaggtttt ctcgagttgt
     1081 tgtgatgcta ttatgagcac ttatatttgt tttgtctcta gttcttctgt atcttataag
     1141 ttgtgtttca agtattttaa tttcgccaat atttaatata tcaatatgca tcttcatatc
     1201 ttgatagttg cacattgaat ttggtaaagg atataatttt tcaaaaacat ctctttttaa
     1261 agataatcca actgatgtta agcagttgta tcgcataaat aaataatata ataattctac
     1321 cttatttctt tgttttaatg gatataagtt ccctaaaatt tcattatttt catctataca
     1381 aatcaaattt ggatatacag ctataatatc attatcttta aatgttttat agataatttc
     1441 taaagcattt ttttctaata tatcatcact tgcgcaaaat actatgtatt ctccatttga
     1501 gttttcgaaa gctgtattta atgtcgcatt tatacctttg ttaaattcat gttttataag
     1561 ttttattttt ggatctttaa atttttgaat ttcttttgtg ctattatcac ttgaacaatc
     1621 atctactata atgagctcaa aatcactaaa actttgctct aaaacacttt gtaaaaaata
     1681 actcacatat ttttcatgat taaaacatgg ggttagaatg gaaatttttg ccattacttt
     1741 atccttgtaa tattataact tatttaattt ttgagcgata attttaaatc catcaatacc
     1801 tgaaattata aaatagtttt caaattcttg aaagacatta tatcctataa attcgtttac
     1861 taaaatagat ttaataattt tactattatt gataatggga agttgatatt cttgaaaaat
     1921 aaatgctcga atttaattat gtgtttcaaa acttgttttt taaa
//
LOCUS       DARBAC010000148         1900 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.148, whole genome shotgun sequence.
ACCESSION   DARBAC010000148 DARBAC010000000
VERSION     DARBAC010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.148"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            25..1419
                     /locus_tag="SB799_001642"
     CDS             25..1419
                     /locus_tag="SB799_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003103909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEG0868862.1"
                     /translation="MIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRERIPERTVHAK
                     GSGAYGEIKITADLSAYTKAKIFQKGEITPLFLRFSTVAGEAGAADAERDVRGFAIKF
                     YTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESLH
                     QVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLTNQEAAE
                     LIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPHSLVPL
                     MDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRYRIGT
                     NYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLE
                     GVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKIITRALEHFEKI
                     SPDYAKGIKKALEK"
     gene            1476..>1900
                     /locus_tag="SB799_001643"
     CDS             1476..>1900
                     /locus_tag="SB799_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HEG0868863.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNANLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNF"
BASE COUNT          711 a          285 c          334 g          570 t
ORIGIN      
        1 aaattaacta acgattttgg aaacattata gccgataacc aaaattcatt aagtgcaggc
       61 gcaaaaggac ctttgcttat gcaagattat cttttgcttg aaaaacttgc tcatcaaaat
      121 agagaaagaa ttccagaaag aaccgttcat gccaagggaa gtggggctta tggagaaata
      181 aaaatcaccg ctgatttatc tgcttatact aaggcaaaaa tatttcaaaa aggagaaata
      241 actcctcttt tcctacgctt ttctactgtt gcaggtgaag caggtgcagc agatgctgaa
      301 cgcgatgtga gaggttttgc tattaaattt tacaccaaag aaggaaactg ggacttggta
      361 ggaaataaca ctccgacatt cttcatccgt gatgcttata aattccctga tttcatccat
      421 actcaaaaaa gagatccaag aacacattta agaagcaata atgctgcttg ggatttttgg
      481 agtttatgtc ctgaaagttt acatcaagta accattctta tgagcgatag aggaattcct
      541 gcaagttatc gtcatatgca tggatttgga agccatactt atagttttat taatgataaa
      601 aatgaaagat tttgggtgaa attccatttt aaaacccaac aagggattaa aaatcttacc
      661 aaccaagaag ctgccgagct tatagcaaaa gatagagaaa gtcatcaaag agatctctat
      721 aatgctatag aaaataaaga ttttccaaaa tggaaagttc aagttcaaat tcttgctgaa
      781 aaagatatag aaaaacttgg atttaatcct tttgatttaa caaaaatttg gcctcatagt
      841 cttgtgcctt tgatggatat aggcgaaatg attctaaaca aaaatcctca aaattatttt
      901 aatgaagttg aacaagctgc ctttagtcca agcaatatcg ttcctggaat tggctttagc
      961 cctgataaaa tgttgcaagc tagaattttt tcatatcctg atgcacaaag atatagaata
     1021 ggaactaatt atcatctttt gcccgtaaat cgtgcaaaaa gcgaagtgaa tacttacaat
     1081 gtcgctggtg ctatgaattt tgatagttat aaaaatgatg cagcttatta tgaaccaaac
     1141 agctatgata atagcccaaa agaagacaaa agctatcttg aacctgattt agtcttagaa
     1201 ggcgtagcac aaagatatgc tccactagat aatgactttt atactcaacc aagagcttta
     1261 tttaatctta tgaatgatga tcaaaaaact caactttttc ataatatcgc cgcttctatg
     1321 gagggagttg atgaaaaaat tatcactaga gctttagaac attttgaaaa aatttcacct
     1381 gattatgcaa aaggaattaa aaaagcttta gaaaaataat ttttacttgc cacttttggt
     1441 ggcaaactaa agattataat aattaaggaa aaacaatgac aactcttagt ttagaagaag
     1501 aaaaaagatt tgaagaactt tgcaaaatgg cttttaattt tgcaagaaat aatgaatgtg
     1561 aaaatcttaa aatcatgata gaagcaggtt taaatgcaaa tttaaaaact cataaaggcg
     1621 atagcttgct tatgcttgca gcttataata attcttatga aagcgctaaa atgcttttag
     1681 aaaaaggtgc aaaagtagat gaaaaaaacg atcgtggaca aaccccatta gcgggagttt
     1741 gttttaaagg atacttacct atgtgtgaac ttttagttaa atatggagca aatattgatg
     1801 aaaacaatgg tttaggaatg acaccttata cttttgctat tatgtttgga cgcaaagatg
     1861 tggcagaatt tttactcaaa aaatctaaaa ataatttttt
//
LOCUS       DARBAC010000149         1716 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.149, whole genome shotgun sequence.
ACCESSION   DARBAC010000149 DARBAC010000000
VERSION     DARBAC010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.149"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            39..1109
                     /gene="rlmN"
                     /locus_tag="SB799_001644"
     CDS             39..1109
                     /gene="rlmN"
                     /locus_tag="SB799_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEG0868864.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKYLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELVDGLRVESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNDGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDGLRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSSKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            1206..>1716
                     /locus_tag="SB799_001645"
     CDS             1206..>1716
                     /locus_tag="SB799_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HEG0868865.1"
                     /translation="MLNTTKLLENKLFQERYIKPNIDWYFSYLNGKRGMSRIYKTPYA
                     ILMKKFFLQKYFEKRIKKRIIDIPYLELVLTTKCTMRCQSCNNLMQYFSQNNQYTCTF
                     EGIKKSLEILLSKVDSIARIRIIGGEPLLFKDLPKLIDYLNCQKKILTFSLVTNGTID
                     FKDELINKLK"
BASE COUNT          654 a          220 c          290 g          552 t
ORIGIN      
        1 atatcattat atttaaaaat tcaaaaagga aaataatttt gaaagagctt gttaatattt
       61 tagatttttt acctgaagaa ttaggagaaa aaatcaaacc gatgtttcgc gtgaaacaaa
      121 tttatcaatg gatttatcaa aaatatgcca ataatttttc cgatatgtca agtttaccaa
      181 aatatctacg tttagaactt gcgcaaaatt ttcatttttc ccctgtaaaa tgtgttaaaa
      241 atgagcaaag taaagatgga agtataaaat atctttttga actcgttgat ggtttaaggg
      301 tagaaagtgt gcttttgcct atgaaagaag aaaaaataga cgcagaaggc aaaagaattt
      361 ctcatgcaag atacactatc tgtgtttctt ctcaagtggg ttgtaaaagt ggatgtagtt
      421 tttgtcttac tgccaagggt ggtttgaaaa gaaatttaag tgcaggggag atagtcggac
      481 aaattttatg gatcaaaaaa caaaataata tcccttatga acgccgtgta aatatagtat
      541 atatgggtat gggcgagcct ttggataatc ttaaaaatgt ttctaaagcg gtaaaaattt
      601 tagcacaaaa tgatggactt gccataagtc ctcgccgtca aaccatcagc actagcggtt
      661 tggcaaaaca aatcaaagaa ttaggtcaaa tgaatttagg tgttttactt gctatatcat
      721 tgcatgcggt taatgatggg cttcgaaccg aacttatgcc tatcaataaa gcttataata
      781 tcgctgcgat tatggatgcg gtgcgtgaat ttcctataga tcaaagaaaa agagtgatgt
      841 ttgaatatct tttgatcgat ggtatcaatg ataagcttga acacgctaaa gaattagtca
      901 agcttttaaa tggtattaaa gccaaagtga atttaatact ctttaatcca catgaaggaa
      961 gtttatataa acgccctagt ttagaaaatg cgattaaatt tcaagattta ctcagtagta
     1021 aaggtgtaac ttgcactata agagaaagta aagggcttga tatctcagct gcttgtggac
     1081 agcttaaaga aagggcaaaa gaacaatgac aatgctagat atttttgaaa tcgtttttat
     1141 aacagctgtt gtaattatag gtttttttgg tataatttat tttttaaata aagaaaggtg
     1201 aaataatgtt aaatacaaca aaattactcg aaaataaatt atttcaagaa agatatatta
     1261 aaccaaatat agattggtat ttttcttacc taaacggaaa acgaggaatg tcaagaattt
     1321 ataaaacacc ctatgcaatt ttaatgaaaa aatttttttt acaaaaatac ttcgaaaagc
     1381 gtattaaaaa aagaataata gatatacctt atcttgagct cgttttaact acaaaatgca
     1441 ccatgcgttg tcaatcttgc aacaatttaa tgcaatactt ctctcaaaat aatcaatata
     1501 cttgcacatt tgaagggata aaaaaatcac ttgaaatttt actttccaaa gtggatagta
     1561 ttgcaagaat tagaattata ggtggagaac cattattatt taaagattta cctaaactta
     1621 ttgactactt aaattgtcaa aaaaaaattt tgacatttag tttagtaaca aatggtacta
     1681 ttgattttaa agatgaatta attaataaac tcaaac
//
LOCUS       DARBAC010000150         1677 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.150, whole genome shotgun sequence.
ACCESSION   DARBAC010000150 DARBAC010000000
VERSION     DARBAC010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.150"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            116..667
                     /locus_tag="SB799_001646"
     CDS             116..667
                     /locus_tag="SB799_001646"
                     /inference="COORDINATES: protein motif:HMM:NF017885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEG0868866.1"
                     /translation="MTYKEIKDKTPYEILDLLEMKEPPFNPFEIAQKLGINVVKDLDL
                     DKIDTEGQISVDEKGEPIIWINPLKNENRQRFTLAHELGHLANDILPSIENPIIDSYE
                     TLYRSNTYGGIETRANQFAARLLMPLRQIEDFIAECRKTTPDLKAAEAILLIASKFEV
                     SKQAVFHRLKNVGLIKQDYTYPF"
     gene            complement(664..948)
                     /locus_tag="SB799_001647"
     CDS             complement(664..948)
                     /locus_tag="SB799_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868867.1"
                     /translation="MDRVSADIRQGVNKRFINAICNHNNELVLEYLKNGMSVTKECMG
                     KEPMFYAVTHNNFGAILLLLKYGAILDKEYLEESNKNFSKEALEFLASLL"
     gene            complement(1008..1637)
                     /locus_tag="SB799_001648"
     CDS             complement(1008..1637)
                     /locus_tag="SB799_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HEG0868868.1"
                     /translation="MQMQEVIEKLKDILASEGKCNLKTKDIAKELGIHPDTFNSMKFR
                     NSIPYPQILNFLNQRNISINYFFYGSSPKDQLECENKYKILKLYKTNASLGGGGINDL
                     IDSSDLIIDEKVLNFFGSKECEFITCYGESMEPIIKDGSICVIDRNKTFKNKSICVIN
                     TRDGLFIKQVLKQDDGVILHSLNPLYEDIFYKNGDFLLIGVVIGELSRL"
BASE COUNT          598 a          256 c          224 g          599 t
ORIGIN      
        1 taaaaaatag tgaatttatg gaagaatttg aaagaatggt cgatttacat ataaatgata
       61 aaatatctat attgacagat attgatcaag aaaaatcaca aataggaggt ttggaatgac
      121 ttataaagaa ataaaagata aaacccctta tgaaatttta gatttattgg aaatgaaaga
      181 accaccattt aatccgtttg aaattgctca aaaattaggt ataaatgtag ttaaagatct
      241 tgaccttgat aaaattgaca ctgaaggtca aattagcgta gatgaaaaag gtgaacctat
      301 tatttggata aatccgctta aaaatgaaaa tagacagcgt tttacattgg cacatgaatt
      361 agggcattta gctaatgata ttttacctag catagaaaat cctattattg atagttatga
      421 aaccctttat agaagcaata catatggtgg aatagaaact agagccaatc aatttgcggc
      481 aagactactt atgcctcttc gacaaataga agattttata gcagaatgca gaaaaacaac
      541 acctgactta aaggcagcag aagcaatatt acttattgct tcaaaattcg aagtttcaaa
      601 gcaagctgtt tttcacagac ttaaaaatgt aggtctgata aaacaagatt atacatatcc
      661 tttttagagc aaagaggcta aaaattctaa agcttctttg ctaaaatttt tattgctttc
      721 ttctaggtac tctttatcta aaatagcacc gtattttaat aaaagtaaaa tcgctccaaa
      781 attattatga gttactgcat aaaacatagg ctctttaccc atgcattctt tagtaacact
      841 cataccattt ttaagatatt ctaaaacaag ttcattgtta tgattgcaaa ttgcgtttat
      901 aaatcttttg ttaacacctt gtcttatgtc tgctgatact ctatccatct ttatatcctt
      961 ttgtattgat gagacaagat tagcttggct tagcttattg tgtgctgtca tagtcttgaa
     1021 agttctccaa ttaccacacc aattagcaaa aaatctccat ttttataaaa tatatcttca
     1081 tataaaggat ttaaagagtg taaaatcact ccatcatctt gttttaaaac ttgttttata
     1141 aaaagtccat ctctagtatt aatcacacaa atgcttttat tcttaaaagt tttatttcta
     1201 tctattacac aaattgaacc atcttttatt attggttcca tactctctcc gtaacaagta
     1261 ataaactcac attctttact tccaaaaaag tttaaaacct tttcgtcgat gattaaatca
     1321 gagctatcaa tcaaatcatt tataccacct ccgcctaaac ttgcatttgt tttataaagc
     1381 tttaaaattt tatacttgtt ttcacattct aattgatctt ttggggaact tccatagaag
     1441 aaataattaa tgcttatatt tctttgattt aaaaagttta ggatttgtgg atatggaatg
     1501 gagtttctaa atttcatgga attaaaagta tcaggatgaa ttcctagttc tttggctata
     1561 tcttttgttt ttaaattaca cttaccttca ctggctaata tatcttttaa cttttcaatc
     1621 acttcttgca tttgcatgtt aaatcctttg attttaattt caaagaaatt taacaaa
//
LOCUS       DARBAC010000151         1674 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.151, whole genome shotgun sequence.
ACCESSION   DARBAC010000151 DARBAC010000000
VERSION     DARBAC010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.151"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            131..1435
                     /locus_tag="SB799_001649"
                     /pseudo
     CDS             131..1435
                     /locus_tag="SB799_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916381.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
     gene            1457..>1674
                     /locus_tag="SB799_001650"
     CDS             1457..>1674
                     /locus_tag="SB799_001650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868869.1"
                     /translation="MKEFDEKLAQYGIFTINGVENIDLIKKEIVLENISIERIDFNIL
                     QEKGIKRLIIKNSEILEIYFSKTNNFFI"
BASE COUNT          659 a          162 c          195 g          658 t
ORIGIN      
        1 aaaaataaat tcttcaagac taaaaacatt aaaatcaaaa ttaatgcctt taatttttta
       61 ttctttatta ccaatggcac atacattatt tctaccattt tatttatttt gcactatttt
      121 tataataata aaaataataa caaagatatt aataaaaata tcaaaattat tttattattt
      181 ttatatatct tttagacctt tagaatggaa taagtttata attttttgga aagtaaaatt
      241 taatcattgt ataaaaaaat taatgacttt tggaagaaaa atgctagatt ttactttatg
      301 gtttgattgt attttattgc aagtttatag gaatactagt aatcatcata caaatttctt
      361 aaaaatttta aattttacga ttttaatgat ttcatcatat gctatttttg gcttattatt
      421 tttaaataat atggatttta tattatcttt tggtccaatg acaatagctg caatgaatta
      481 tatcgtttta ttaatgttat taattatttt tattagcctt acaaggcaat tatatcaaca
      541 tggtgctatt ttattatttc ttatttatgg tctttttata atcagcatag tatcattttt
      601 atcaccaata tacattccag ctttttattt tttaatttat tttgtaggta tattaatttc
      661 ctatctttta tttatctgta aaattaaact ttttgttttt atttcgagat tgtttgccta
      721 tatttgtcta attggggttg ttattttaaa acctcaactt atcaatcctt ttgtaggaat
      781 tttttcatcg gataaacttt atgaaagtaa atttgaaaaa aggttaaatg atttaaatac
      841 gagtgctatt ataaatctag caagcatatt gcaaaatgat tttaatctcc atttaaaaga
      901 tcaaaatatt tcttttacag agttaaattc agctaaagct ttgataatag caaataaaga
      961 aaaattaaaa gaaattttat ctaaagtgta taatgataaa tatgtaagtg attataaaaa
     1021 ggttttaaat gaactagaaa ataacacatc aaatgtaaaa aatatcatag aagagataga
     1081 caataaaaac aacaatagcg ttgtatctgc tcaacttaat aaatttttaa aattaaattt
     1141 taatcaagaa atagatattt tatatgcgat aaaaagtaat ttttctatat ctgaaaaact
     1201 atcacctgag caaatggctc tttttgatca aaaagacagt caagataaat taaaaagtgt
     1261 cttggctctt ttgaaattta aatcaagttt tgaagggatt ttaaagatta taaatcaaga
     1321 cgagattaca gaaaacacca taaaatccac tggtgtttta tatggcatta tacttttgct
     1381 ttgtatattt tcactccaaa agaccgcgcg aaaaaattct atagtgccaa gttgaaaggt
     1441 taagtaaagg gttaaaatga aagaatttga tgaaaaatta gcacaatatg gaatttttac
     1501 tataaatggt gtggaaaata tagatttaat taaaaaagaa attgttttag aaaatatcag
     1561 tatagaaaga atagatttta atattttaca agaaaaaggc attaaaagat taattataaa
     1621 aaatagtgaa attttagaaa tttatttttc taagacaaat aattttttta tata
//
LOCUS       DARBAC010000152         1588 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.152, whole genome shotgun sequence.
ACCESSION   DARBAC010000152 DARBAC010000000
VERSION     DARBAC010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.152"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..365
                     /locus_tag="SB799_001651"
     CDS             <1..365
                     /locus_tag="SB799_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEG0868870.1"
                     /translation="ISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIF
                     DSLVFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFL
                     ALGIFLPMWELSSGVNFN"
     gene            complement(358..1122)
                     /locus_tag="SB799_001652"
     CDS             complement(358..1122)
                     /locus_tag="SB799_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEG0868871.1"
                     /translation="MGFEHLNTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFFTTLGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
     gene            complement(1126..>1588)
                     /locus_tag="SB799_001653"
     CDS             complement(1126..>1588)
                     /locus_tag="SB799_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HEG0868872.1"
                     /translation="RLKNESSLYELFYQAYQERENTTDAILAFMQKIKTLNSYSSYGY
                     DFFFGKIWQNTPTSPLKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHAHKISL
                     TLGLLKRKIYDYKSVLELTQNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
BASE COUNT          543 a          229 c          263 g          553 t
ORIGIN      
        1 caatatctaa agcttttgat ttagctatta tagggcttga aaataaattt ttaatttttc
       61 agtataaaaa actttttagt tttatagatt ctggtcttga gttaagtcag gcttttaaaa
      121 agattgatat ttttgattct ttggtgtttt ctatgcttag tgttgcgatg aaaagtggga
      181 gacttgaagt attaagtgaa gaaattgcca aatattatca acaaaaaagc gaaaatttga
      241 tggatagatt tttgattttt ttagagccta tgatgacttt atttgtagcg cttttagttt
      301 tgtttttggc tttaggtata tttttaccta tgtgggagct tagctcaggg gtcaatttta
      361 actaaaataa tcccaagcta ctttaataat agtagctcct acaacgatta aaaataaagt
      421 ttttataaac tttccattag tttttaatac aagttttgag cctaaataag ctcctaaaac
      481 ttgtcctaca cccataagca aacctacagc ccataaaagt tcatattgcc ataaaaatat
      541 agcaagagca atgatgttgc ttgtgaaatt taaaatttta gtattaatgc tcgcttttct
      601 catattaaaa cctagtagca tcacacaagc aaaaatccaa aatgaacccg ttccaggccc
      661 taaaaatcca tcataaaatc ctaaagttaa gccacaaatt aaatgaaaaa ttttgatatt
      721 ttttatttta ggttcgcttt cgtgtttgcc taagttggga cgtaaggctg tatataagaa
      781 ggtaagagtt aaaaagatta agataataag ctttaattgc tcatctttta caaaaagaac
      841 actataactt cctatagctg ctcctaaggt tgtgaaaaaa acaccccaag caagatgagg
      901 tagagtggtg gatttaaaat aagttaaagt agctgtaaaa gaaccaaaga cgctttggag
      961 tttgtttgtt gctaaggata aatgcgcagg aattccacag gctatgagtg ctggtagagt
     1021 aataagccct cctccaccta caatagaatc tataaaacca gcaaaaagag ctacaaaaaa
     1081 aagtatgaaa taataaattg tatttaagtg ctcaaaaccc attcttcact ccttaaattt
     1141 gtcaatttcc ttactttgcc ctaaacgata gagtgcaaag tcatatttta tgggatcatt
     1201 tgcatctaat ttttttaaat tttgtgtgag ttctaaaaca cttttataat catatatttt
     1261 acgctttaga agtcctaaag tcaaggaaat tttatgtgca tgtgtatcaa gtgggattaa
     1321 aagatctttg gtgtgaattt tggtaaaaag tccaagatca agttcatctt ttctaaccat
     1381 ccatcttaga tacatattat agcgtttaag aggtgaagta ggggtgtttt gccaaatttt
     1441 tccaaagaaa aaatcatatc cataacttga atatgaattt aaggttttga ttttttgcat
     1501 aaaagctaag atggcatctg tggtattttc tctttcttga taggcttgat aaaaaagttc
     1561 gtagagtgaa ctttcatttt tcagcctt
//
LOCUS       DARBAC010000153         1586 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.153, whole genome shotgun sequence.
ACCESSION   DARBAC010000153 DARBAC010000000
VERSION     DARBAC010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.153"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            35..742
                     /gene="ubiE"
                     /locus_tag="SB799_001654"
     CDS             35..742
                     /gene="ubiE"
                     /locus_tag="SB799_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEG0868873.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVVWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IEAGAQNLPLESQSLDILSISYGIRNVIERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEMLD
                     YKSFSFGVSSMFIAKKL"
     gene            739..>1586
                     /locus_tag="SB799_001655"
     CDS             739..>1586
                     /locus_tag="SB799_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEG0868874.1"
                     /translation="MTPTELNLKAKALLETHFEDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSIKKAGFGDLE
                     AQFLALKERLQKEGLFDPLFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NHKIQN"
BASE COUNT          576 a          176 c          313 g          521 t
ORIGIN      
        1 caagtaaaaa tttgaaaatt tacaaaggat aaaaatgcaa aaacaagaaa aaattataga
       61 aatgtttaat caaattgcac ctacttatga taaggcgaat agaattttaa gctttggagc
      121 tgatgtagtg tggcgcaaaa aagcttgtca aagagtgatg agtttatatt taaaaaaaga
      181 tttaaaaatc gctgatattg cctgtggcac aggggatatg atagagattt ggcaagagag
      241 tgctttaaaa atggaaaaaa acattttaaa tattaaaggt attgatccaa gtagtggtat
      301 gctaaatgtt gcaaaagaaa aatttccgaa tgtcgaattt atagaagcag gggcgcaaaa
      361 tttgccttta gaaagtcaaa gtttagatat tttaagtatt agttatggca ttcgcaatgt
      421 tatagaaaga caaaaagcct taagtgaatt tgctagagta cttcaaaaag atggtatttt
      481 ggtagttttg gaatttacaa aaagagaaaa gggtggattt atagcagctt gtagagattt
      541 ttatcttaaa aatattttac caagtatagg tgggataatc agtaaaaata aaagtgctta
      601 tgagtatttg ccaaactcta ttgaaggatt tttaagtaag gaagagttca tcttagaact
      661 taaaaatgct ggttttgaaa tgcttgatta taaaagtttt agctttggcg tgagttcaat
      721 gtttatagca aaaaaactat gacgccgaca gaattaaatc ttaaagcaaa ggctttatta
      781 gaaacacatt ttgaggatat agttttaagt ggagaaattt caaaaatcac tttgcatggt
      841 tcagggcatt ggtattttga tttaaaagat gaaagatcaa gcattgcttg tgctatgttt
      901 aaaggagcta atttaaaagt cggatttaaa ccagctgtgg gggatttttt agagctttgt
      961 ggaagtgtga gtttatatcc tgaaagtggt cgttatcaat ttatcgctac tagtataaaa
     1021 aaagcaggtt ttggggattt ggaagcacag tttttggctt taaaagagcg tttgcaaaaa
     1081 gaaggacttt ttgatccact ctttaaaaaa tctttgccaa aatttcctaa aaaagtaggc
     1141 attatcactt caaaaacttc tgctgctttg caagatatgt taaaacttat tcatcaaaaa
     1201 gaatattttt tggcaaaaat ttatattttt gatgctttaa ctcaaggaaa taatgctcct
     1261 ttttctctta tacaagcttt aaaaaaagcc gatgatatgg atttagatgt tcttattata
     1321 gcacgtggtg gaggaagcag ggaagatctt ttttgtttta atgatgaaaa tttagcaaga
     1381 gagattttta aagcaaaaac tcctatcatt tcagccatag gacatgagat tgattatgtt
     1441 attagtgatt ttgttgcaga ttttagagct ccaacgccct cagctgctat agatactttg
     1501 ttttattcta agctggatat agagcaaagt ttggatttaa tggaagaaaa attgatgcaa
     1561 ctttggaatc ataaaataca aaatta
//
LOCUS       DARBAC010000154         1585 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.154, whole genome shotgun sequence.
ACCESSION   DARBAC010000154 DARBAC010000000
VERSION     DARBAC010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.154"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            306..1370
                     /locus_tag="SB799_001656"
     CDS             306..1370
                     /locus_tag="SB799_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEG0868875.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIDELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFRNNTVRNKLIIKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1360..>1585
                     /locus_tag="SB799_001657"
     CDS             1360..>1585
                     /locus_tag="SB799_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aminodeoxychorismate synthase
                     component I/aminotransferase"
                     /protein_id="HEG0868876.1"
                     /translation="MTLENYAIFGKYFYHDLKHTLKAFNHKESKKCFKFIEKYKNDFY
                     ILMLADYELYRYFQDKNFTSKKAYLSVFAFK"
BASE COUNT          628 a          196 c          222 g          539 t
ORIGIN      
        1 aggtaaaatc ataaaaatat gtaaaaatag taatttaatc catatcaaag tagaattatc
       61 taggcgtata taaaaaagtt tgaaaattac agttttcaat acaaaattat aaattttaca
      121 tatttttacc ttttatcata tctttttatg attgatataa gatttattta ataaaaatat
      181 tttaatcttt ttgccttgta tataaaaaca aactttttcc taaaaaagct tttttttact
      241 aagttaatgc taaaatacct tttctagtta aaaagctaaa aattttagat ttaggaaaag
      301 tttttatgaa atacccttta gattgtgaag aaaattttga aaaatcattc ttattttggc
      361 tagcaaaata tgtaaaattt aaactcaact cactatctaa caaagagtta aaaaatccac
      421 aagctttagc agaagttaat tttgctctta caaaaggtgt aaaaaacatt gatgaacttg
      481 acgctctagc aaaaaaagca agaaatgctg gtttaagtgg agttaatact tattttaatc
      541 ctttaaaaaa agtattcgaa tatttaaatt tttacaagct ttattcttta aaacagattg
      601 atgaagaact cattgtagaa gttttagcaa gtataacagg tgctttatca gatgcaagta
      661 aaaaaaatta ccgtattgct gtgattaatt tttttgattt tttagacaag caaaatgaag
      721 aagatgaaaa agcgcatatt ttcgatatca atcttaaaaa ctgggcaggt atagcgggtt
      781 ctaaaggggt aaaattacct gaatttatga gcgaagaaga gcttaaaaaa tttcttgatg
      841 ctattgaaaa tgcagatttt agaaacaata ctgtacgcaa taaacttatt attaaaatca
      901 tcatttttac aggcatacgg gtaagcgaag ctatcaatat caaaatgggt gatattagcg
      961 aagaaaatga tctttatatc ataagaataa gagctaaagg caataaatat cgtgttgtaa
     1021 tgataaaaaa agaacttatt tacgatttgc ttaaaaatgt aagtattaat tatatgagca
     1081 aagacgccct actttttgtc aataaaaaag gcactccact gactcaatct tatgtcagtc
     1141 gcatagtaga acagctttta tttcgtgcag gaattcgcaa acaaaaaaat ggtgctcaca
     1201 tgttgcgtca tacttttgcc accctacttt ataaaaaaca aaaagattta gttttagttc
     1261 aagaagcttt agggcatgca agtttaaata cctcaagaat ttacactcat tttgataacg
     1321 ataaattaaa acttgccgca caggttgcaa aggaattaag tgactcttga aaactatgct
     1381 atttttggta aatattttta ccatgattta aaacacactt taaaagcctt taatcacaaa
     1441 gaaagtaaaa agtgctttaa atttatagaa aaatataaaa atgattttta tattttaatg
     1501 cttgctgatt atgagctata tagatatttt caagataaaa atttcacaag caaaaaagct
     1561 tatttgtctg tatttgcttt taaaa
//
LOCUS       DARBAC010000155         1548 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.155, whole genome shotgun sequence.
ACCESSION   DARBAC010000155 DARBAC010000000
VERSION     DARBAC010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.155"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(77..1423)
                     /locus_tag="SB799_001658"
     CDS             complement(77..1423)
                     /locus_tag="SB799_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HEG0868877.1"
                     /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACILLI
                     LEQLGFGVGAALGVKGGVFDIKTLVAFIKDGVKSVTDTAALFVFSILFFSVLNASGFF
                     TKILNAFLSKMKANVYQVCILTVFIAAAVHLDGSGASTFLIVIPALLPIYERLGIRKT
                     SMLLIITSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWI
                     AKIEIKRGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIIPSYICFM
                     IGLAIILPLNYPNLKTAKKVLDRASGGAMLMYITLIGAGILIGVFDKSGIMEKMGVLI
                     LNFVPDYLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFSAEPLTIAIIM
                     VIARNCATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
BASE COUNT          622 a          305 c          170 g          451 t
ORIGIN      
        1 tttataaatt tttgactcaa aaatatcata aaacaatgaa ccaatcattg aaaaatcaaa
       61 agttctttta ttttaattat attatcccag ctacctcagc aaaaatcaag caaataatac
      121 ttatacccca tatataaaaa aagcttcttt tgatatgatc tttaatatta acctctgcta
      181 aaccacaacc tagcaaagtt gcaggcacaa caggagaaat aaatgtcgca caatttcttg
      241 ctatcaccat gataatagct atagtcaaag gttcagcact aaaagcctta gttacactca
      301 aaactatagg catcactcca taaaaataag aatctgtaca aaaaataatt gccattggaa
      361 cagccaatat ccctaccatc aaaggaatat aagcgcctaa ataatctgga acaaaattta
      421 aaatcaaaac acccattttc tccataatac cacttttatc aaatacgcct attaatatcc
      481 cagcaccaat taaagtaata tacataagca ttgcaccacc acttgcacga tctaaaactt
      541 ttttagctgt ttttaaatta ggataattaa gcggtaaaat tattgcaagt cctatcataa
      601 agcaaatata actaggaata atgccgctaa ttaaaagccc aataacccca atagctacaa
      661 gtaaatttaa ccaaaaccat ttttcattat ggtgttcgct tttttctata tttaaattta
      721 ttccagacaa gttacctgcg cctgcacctc tttttatttc tatcttagca atccaaattg
      781 ccaaaagaag ggataatacc aaacctacaa tctgaatagg tataatatgg tgccaaagca
      841 aatttgcatc cattcctata ttagtagccg ctcttaaagt aggaccaccc caaggaataa
      901 cattcataac ccccatagcc gaagtaataa tcaataacat tgaagtcttt cttataccta
      961 aacgctcata aataggtaat aatgcaggta ttacaataag aaaagtagaa gcacctgaac
     1021 catctaaatg cacagcagca gcaataaaaa cagtaagaat gcaaacttga tatacattag
     1081 ctttcatttt tgataaaaat gcatttaaaa ttttagtaaa aaaaccactt gcatttaaaa
     1141 cactgaaaaa gagtatagaa aaaacaaaca aagctgccgt atccgttacg cttttgactc
     1201 catctttaat aaaagcaacc aatgttttaa tatcaaaaac acctccttta acccctaaag
     1261 ctgcacccac gccaaaacca agttgttcaa gaataagtaa aatacaagct acactaatac
     1321 ttacacttat aaaagctaat gctggagtag tataatcttt tagcaaaagc caaactatca
     1381 atcctaacga gaaaaaacct aataaagcta aaaaaatttc catatcctat ccttttgtat
     1441 catttttatt cgataataaa ataggatatt ttaagtccaa cttatatgtg tttaaattta
     1501 tagctttttg aaaaaaatat attttctaat gtaaccattt taaacaag
//
LOCUS       DARBAC010000156         1403 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.156, whole genome shotgun sequence.
ACCESSION   DARBAC010000156 DARBAC010000000
VERSION     DARBAC010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.156"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>1403)
                     /locus_tag="SB799_001659"
     CDS             complement(<1..>1403)
                     /locus_tag="SB799_001659"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEG0868878.1"
                     /translation="FKKLYKIKKQHKKEQKIYQQTIQVFPQLKYPSLEACSDYEQALR
                     YKFHLSYMLGEVLIKADVNKFKDGYFFLFKNIEQTKKDYKIIKEILDLSKKFEENIYT
                     ILAENKNLFMCNLDNLKIILDLHKNYIPVLKVIFQNFNYTLNHLEMIQEWLLSSDFKQ
                     RFQDVNHPYPSLLDPKKLNDQAEKINYHNISGELAWKMNLPLPENYKLIWLWAACSGT
                     MAIYTFFNYSDISTINANGWEDEKKVYIDNYTYILSKKTHVAIAPRVFENNDKIYYLF
                     TSNVPLLYICRDPISIIRHAINHIGDQNSKIKPMMKQITLNSNFKELFPEILYWYSNS
                     SKPELNSLIKVLDNYELYFKSYQRIKILKKDVLCFELNEISGLNARKTFDFIADKFFN
                     VKCDYSFFSKRINRHQGDLVVLPVVYSIVIGEICINIVITTKNLMYFNSLEPKMTDED
                     YIDITSEIFKERKLMFD"
BASE COUNT          498 a          180 c          153 g          572 t
ORIGIN      
        1 ttatcaaaca ttaactttct ttctttaaaa atttcagaag taatgtcaat atagtcttca
       61 tctgtcatct taggctctaa agaattaaaa tacataagat tttttgtagt aattactata
      121 ttaatacaaa tttcacctat aacaatagaa tatacaactg gaagcacaac caaatcacct
      181 tgatggcgat taattctttt agaaaaaaaa gaataatcgc attttacatt aaaaaattta
      241 tcagctataa aatcaaatgt ttttcgagca tttaaaccag agatttcatt aagttcaaaa
      301 cacaatacat ctttttttaa aattttaatt ctttgatatg atttaaagta aagttcataa
      361 ttatctaaaa cttttatcaa actattcaat tcaggtttgc ttgaattgga ataccagtaa
      421 agtatttctg gaaaaagttc tttaaaattt gaatttaaag ttatctgttt catcattggt
      481 tttattttgc tattttggtc gcctatatga tttattgcat gcctgataat tgatattgga
      541 tctctacata tatataataa aggaacattg ctagtaaata aataataaat tttatcatta
      601 ttttcaaaca ctcttggagc tattgctaca tgtgtttttt tgcttaatat atacgtataa
      661 ttatcgatat aaactttttt ttcatcttcc caaccatttg cattaatagt tgaaatatct
      721 gaataattaa aaaatgtata aatagccatt gttccactac atgcagccca taaccatatt
      781 aatttataat tttcaggcaa tggtaaattc attttccaag ctaattcccc tgaaatatta
      841 tgataattta ttttttctgc ttgatcatta agttttttag ggtcaagtaa agaaggataa
      901 ggatgattta catcttgaaa tctttgctta aaatcacttg ataataacca ttcttgtatc
      961 atttccaaat gatttagtgt ataattaaaa ttttgaaaaa taacttttaa tactggtata
     1021 taatttttat gcaagtctaa gataattttc aaattatcca aattacacat gaataaattt
     1081 ttattttcag cgagtatagt ataaatattt tcttcaaact ttttagaaag gtctaaaatt
     1141 tcttttatta ttttataatc ttttttggtt tgttctatat ttttaaaaag aaaaaaatac
     1201 ccatctttaa acttattcac atcagctttg attaaaactt cacctagcat ataggacaaa
     1261 tgaaatttat atcttaaagc ttgttcataa tcactacatg cttctaaact tggatatttg
     1321 agttgaggaa aaacttgtat ggtttgttga taaatttttt gctctttttt gtgttgtttt
     1381 ttaattttat aaagtttttt aaa
//
LOCUS       DARBAC010000157         1377 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.157, whole genome shotgun sequence.
ACCESSION   DARBAC010000157 DARBAC010000000
VERSION     DARBAC010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.157"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..1377)
                     /locus_tag="SB799_001660"
     CDS             complement(<1..1377)
                     /locus_tag="SB799_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868879.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVENAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRAYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEG
                     TIEKPFLWA"
BASE COUNT          464 a          211 c          191 g          511 t
ORIGIN      
        1 agcccataaa aaaggttttt ctatagttcc ttctattctt gctccacctt cggtgcagtt
       61 gtaggtggtg atattgagtt tttcttttgc ccaaaatata tctttttcaa aagcttgacg
      121 aaacaaattc caagtaagtt gtgttcttac tttgcctttt cctccataag ctagtgtata
      181 tttttctcct ctgatttctt caccttgact tccatgtata tgctctttag gatgtgaact
      241 tccatcctcg ccataagcta aatcctgtcc tataaaaatg atattttcaa atcttaaagc
      301 tcctgctagt tcatagatca tatttgaaac actgtgtcct actccaagat atccatattc
      361 atcaagtttt aaactagctg caaaatttaa agggcgatgt acaagcatat aagctctttg
      421 atctttttct aaaaaatcta atacttcttt gtgaaccaca gaagcaagta tgaaaagtat
      481 gcctttgtta aaatcgccaa aatcattatc aaaacattta gaaactatat catcacgctc
      541 tagcatgcaa acataatcag gctttatacc atgtttagct aaaataggat aagaagaatc
      601 cgcacaaaaa attgtagctt tattagcata tttttttaac aaaggaagtt gttttataag
      661 acttggtcct gtagaaacaa tgatagcatt ttcaacctta gctcttcttt ctttgagaaa
      721 ttcttgaaaa attccatgat ttaacatttt agggagatta tctagggtat gtttgattcc
      781 aactaaagaa tcatgtggat cattaccttt gtttaaaacg ataaatcgta tcatttctat
      841 cagttgagta tttatatttt gtatttgagt actataaaat tgttgataaa aatcattatg
      901 gataaaaaga ttaaaaattt ttacactttt ttgaatgatt tcataagtaa aaagtgtggt
      961 gagttgtgct gtattaatat ttggagtata aaaaagtatt agttgttctt tttttaattc
     1021 ttcgctaaaa tcaaataaat gaaaagctaa agttaaaatt tcaagattgt cttcaaaaat
     1081 gataatgtgt ttatgttgtt tgtttttaca taaagtttta taaaacattc catttccaaa
     1141 gccataaaaa aacaaaacag gatatttgtt atattcggtt ttaaacagag taaggttttc
     1201 caaaagctct ttattgggat tttcataaag aaaaatatca tcttttttaa aatttattcc
     1261 attttcatct tggataagtg caaaagttaa gtatttaagt gatcttagtg tacaagctaa
     1321 aaactcatcg acctcaaaca aagcttgagt attttttaaa aaaagctctt ctctcac
//
LOCUS       DARBAC010000158         1318 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.158, whole genome shotgun sequence.
ACCESSION   DARBAC010000158 DARBAC010000000
VERSION     DARBAC010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.158"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..1047
                     /locus_tag="SB799_001661"
     CDS             <1..1047
                     /locus_tag="SB799_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868880.1"
                     /translation="CMLERDEIVAECFNNDFGEFDKDIIFLVASLVHKKTISYLEKNQ
                     RKYILIIKGQPFARYLELDDYGYINGGMSVSHMAYELAENLGNKNIILIGQDLAYAKD
                     GQTHSQGFIHANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKS
                     KTYNCTEGGARIESAIEKPFKELCEDLLENKKDKKFKKLQVLNTKEQVKLGLKIYQKI
                     KKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEI
                     LGPTLHHEQSILTPLYLKDIKDESDKQNKLFAWVYAHEALMENIIELLEVQDKRLKIA
                     ILPLQDFLEKKKAL"
     gene            complement(1078..>1318)
                     /locus_tag="SB799_001662"
     CDS             complement(1078..>1318)
                     /locus_tag="SB799_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868881.1"
                     /translation="TNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFA
                     AESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ"
BASE COUNT          516 a          182 c          212 g          408 t
ORIGIN      
        1 tgtatgttgg aacgcgatga aatagtagct gaatgtttta ataatgattt tggggaattt
       61 gataaagaca tcatttttct agtagcttct ttggtgcata aaaaaaccat ttcttatctt
      121 gaaaaaaatc aaagaaaata cattttaatt ataaaaggcc agccttttgc tagatacttg
      181 gagctagacg attatggata tattaacgga ggtatgagtg tatctcacat ggcttatgaa
      241 ctggctgaaa atttaggaaa taaaaacatc attctcatag gtcaggattt agcttatgcc
      301 aaagatgggc aaacacactc tcaaggtttt atccatgcta atttacacaa tggagactat
      361 gaaagggact tagataaatt tagcactaca gcttatggag gaaatggaaa agttcaaagt
      421 tctgaaattt ggacactttt tagacaaatt tttgaaaatt tcattgcttt tagcaaaagt
      481 aaaacttata attgtactga aggaggtgct aggatagaaa gcgctataga aaaacctttt
      541 aaagaacttt gtgaagattt actcgaaaat aaaaaagata aaaaatttaa aaaattacaa
      601 gttttaaata ctaaagaaca agtaaaactc ggattaaaaa tctatcaaaa aatcaaaaaa
      661 aatatgaatc tatccttgaa ttttaaaaaa gagtgtaaaa aagttcaaaa acaaattcac
      721 aatcttaccc atggaaaaaa caagctctct cttgaacaaa taaaccagaa tatagacaaa
      781 atcaaagaaa aactttcaaa taaaaaatat ctctttttgc aagaaatttt aggccctact
      841 ttgcatcatg aacaaagtat attaacgcct ttatatctta aagatatcaa agatgaatct
      901 gataaacaaa ataaactttt tgcttgggtt tatgcacacg aagctttaat ggaaaatatc
      961 atagagcttt tagaagtcca agataaaaga cttaagattg cgattttgcc cttgcaagac
     1021 tttttagaaa agaaaaaagc actttaaaag cttagatgca taaaagcatc taagaaatta
     1081 ttgaagaagt tttaaaacat tttgctgcac tgcattagcc tgactcatag cataagaacc
     1141 tgattgtgca aggatgttat atttagaaaa atttgcactt tcagctgcaa agtctacatc
     1201 tcttatggtt gattcagctg ctttaacatt tacttgagta acagtaatgt tgtttatagt
     1261 cacttgaagt tgattttgca ctgaaccaat gtcagctctg atttgatcaa gatttgtt
//
LOCUS       DARBAC010000159         1279 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.159, whole genome shotgun sequence.
ACCESSION   DARBAC010000159 DARBAC010000000
VERSION     DARBAC010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.159"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            99..>1279
                     /locus_tag="SB799_001663"
     CDS             99..>1279
                     /locus_tag="SB799_001663"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868882.1"
                     /translation="MDFIKFLNHFQPISKSSQQASVYKSFKLNLKPKILNEKDENSSS
                     FQDQKTDVAQTMLQRLEDEKVFNQKVSDKVKKAERGMTTIYFRDPITNNLVRSALSST
                     AINKMGIEFDKEDMTKRLDGSYILNGKAENFVAGWYADIAYTRAYVASDRNNDGYLED
                     YELEDTKSGFVAQETNLGLFVQSYTQLNGSVDTLFGFEKDFREMRPDDTKDTDYAGRT
                     IGLELDKMIRKDGDFDGELSFSETGMQAVKTKAPNSGWTESVGILTLTKFDQTNTMEI
                     KDILDKLGKGVKYDDLSEDEKSLLKMQLSDKIFDEVEDKETGNKKLVFNLDKFKIFYE
                     GFVDLFKQRSVKMLGLKPEDATKLNYDNLGEIVNEMKQTYFDTNSTSYGKIADLIKIW
                     A"
BASE COUNT          517 a          131 c          227 g          404 t
ORIGIN      
        1 gtaatagagg ataaaaattt aaaattttct aagttaaaat tacgtaaaat atattagcaa
       61 tatttttgaa aagatgtcga aaatttgaag gcatcaaaat ggattttata aaatttctta
      121 atcattttca acccatatct aaatcttctc agcaagctag tgtatataaa tcttttaagt
      181 taaatttaaa accaaagatt cttaatgaaa aagacgaaaa ttcctcttca tttcaagatc
      241 aaaaaacaga tgtagctcaa actatgcttc aaagattaga agatgaaaaa gttttcaatc
      301 aaaaggtaag tgataaagtg aaaaaagctg aaagaggtat gactactata tattttagag
      361 atcctattac aaataacctt gttcgtagtg ctttaagttc aacagctatc aataaaatgg
      421 gaattgaatt tgataaagaa gatatgacta aaagacttga tggatcatat atattaaatg
      481 gaaaagctga aaattttgtg gctggatggt atgctgatat agcatatact agagcttatg
      541 tggctagcga tagaaataat gatggatatt tagaagatta tgagcttgaa gatacgaaaa
      601 gtggttttgt agcacaggaa acaaatttag gactttttgt gcaatcttat acacaattaa
      661 atggtagtgt agatactcta tttggttttg aaaaagattt tagagaaatg cgtccagatg
      721 ataccaaaga tacagattat gctggtagaa ctataggctt agagcttgat aaaatgataa
      781 gaaaagatgg agattttgat ggagagctta gttttagcga aactggcatg caagcagtaa
      841 aaaccaaagc tccaaattct ggatggactg aaagtgtagg tatattaact ttaactaaat
      901 ttgatcaaac taatacaatg gaaattaaag atatcttgga taaattaggt aaaggtgtaa
      961 aatatgatga tttaagtgaa gatgaaaaat ctctacttaa aatgcaatta tctgataaaa
     1021 tttttgatga agttgaagat aaagaaactg gtaataaaaa acttgttttt aatctggata
     1081 aatttaaaat tttctatgaa ggttttgtgg atttattcaa acaaagaagt gtaaaaatgc
     1141 taggtttaaa acctgaagat gcaactaaac ttaattatga caatcttggt gaaattgtca
     1201 acgaaatgaa gcaaacttat tttgatacaa attctacaag ttatggaaaa atagctgatt
     1261 taattaaaat ttgggctta
//
LOCUS       DARBAC010000160         1231 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.160, whole genome shotgun sequence.
ACCESSION   DARBAC010000160 DARBAC010000000
VERSION     DARBAC010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.160"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            87..1133
                     /locus_tag="SB799_001664"
     CDS             87..1133
                     /locus_tag="SB799_001664"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HEG0868883.1"
                     /translation="MKKLLLCVLVFLSIGACMAEAKPKIAILATGGTIAGSIDSAVAT
                     TGYTAGVVGVDVLIKAVPQIQDLANISGEQIANIDSSNMRDEIWLKLAKEINKLFAEG
                     VDGVVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALAA
                     DKESKGKGVMVAMNDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTK
                     AHTKNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHED
                     QKNVLKELMKKGLDVVVSSRVVAGRVAVSDSDKKLGFISAEDLNPQKARVLLMLALTK
                     TSDPKKIQEYFLKY"
BASE COUNT          415 a          150 c          249 g          417 t
ORIGIN      
        1 aaatttataa aatttttatt tattatttat taatattata taagtttcat taatgaaacg
       61 aattttaaca aaataagggg agaattgtga aaaagttact attgtgtgta ttagtatttt
      121 tatctatagg agcatgtatg gcagaagcta aaccaaagat tgctatttta gcaacaggtg
      181 gaacgatagc aggttctatt gatagtgctg ttgccacaac aggttataca gctggggttg
      241 ttggtgtaga tgttttaatc aaagcagttc cacaaattca agatttagct aatattagcg
      301 gggaacaaat agcaaatatc gatagttcaa atatgcgtga tgaaatttgg ctaaagctcg
      361 ctaaagaaat caataagctt tttgccgaag gggtggatgg tgtggttata actcatggta
      421 ctgacactat ggaagaaact gcttattttt taaatttaac cattaaaagc gataagcctg
      481 tagttttagt tggcgctatg cgtccatcaa ctgctataag tgcagatggg ccaaaaaatc
      541 tttacaatgc tgtagcatta gctgctgata aagagtctaa gggtaagggt gttatggtag
      601 ctatgaatga taaaatttta agtgctagag gcgtggtaaa aacccatagt ttaaatgttg
      661 atgctttctc ttctcctgat tttggggatt tgggttatat agtagatggt aaagtctttt
      721 tctataataa tgttactaaa gctcatacaa aaaacgctcc ttttgatgta agcaaactca
      781 caagtttgcc aaaagtagat attctttata gctattcaaa tgatggtagt ggtgtcgctg
      841 caaaagcttt atttgaacat ggaactaagg gtatagttgt tgcaggtagt ggtgcaggaa
      901 gtatacatga agatcaaaaa aatgttttaa aagagcttat gaaaaaagga cttgatgttg
      961 ttgtaagttc aagggttgtg gcagggcgtg ttgctgtgag tgattcagat aaaaaattag
     1021 gttttattag tgctgaagat ttaaaccctc aaaaagcaag agttttactt atgttagcgc
     1081 ttacaaaaac aagtgatcct aaaaaaattc aagagtattt tttaaaatat taaatttttt
     1141 aaatatttct aaacttaggg aaattatctt ccctaagtca agccttttaa tcctaataat
     1201 agtatattat atcttgcatt ttttattatc a
//
LOCUS       DARBAC010000161         1147 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.161, whole genome shotgun sequence.
ACCESSION   DARBAC010000161 DARBAC010000000
VERSION     DARBAC010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.161"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            129..>1147
                     /gene="pseI"
                     /locus_tag="SB799_001665"
     CDS             129..>1147
                     /gene="pseI"
                     /locus_tag="SB799_001665"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HEG0868884.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKEAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYELYQSAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMVDAVRQAESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQG"
BASE COUNT          445 a          155 c          208 g          339 t
ORIGIN      
        1 tttgaatgaa accaagcaaa atcataacaa agttgtaata tttatataat ataaatatat
       61 aaattgaaga aatatataat ataattatat atcattttag tcaggaaatt taccaaagaa
      121 agaaaagtat gcaaatagga aattttaaca ccgataaaaa ggtttttatc atagcagaac
      181 ttagtgcaaa tcacgcagga agtcttgaga tggcacttca aagtataaaa gctgccaaag
      241 aagcaggtgc tgatgcgata aaaattcaaa cttacactcc agatagcatg actctaaata
      301 gcaacaaaga agattttatt attaagggtg ggctttggga taaaagaaaa ctttatgagc
      361 tttatcaaag tgcaaaaacc ccttatgaat ggcattctca aatctttgaa accgcacaaa
      421 atgaaggcat actttgtttt tcaagtcctt ttgccaaaga agatttagaa tttctaaaac
      481 gctttgatcc tatagcctat aaaatcgctt cttttgaagc taatgatgaa aatttcgtgc
      541 gtttaatcgc caaagaaaaa aaacctacta tcgtttcaac gggcattgct acagaagaag
      601 aactttttaa aatctgtgaa atttttaaag aagaaaaaaa tcctgattta atctttttaa
      661 aatgcacttc ggcttatcct actgccatag aagatatgaa tttaaaaggc atagcaagtt
      721 taaaagaaaa atttaatgtt gaagtgggac taagcgatca tagctttggt tttttagccc
      781 ctgttatggc agtagcactt ggagctagag tgatagaaaa gcattttatg ttagataaaa
      841 gcatagaaag tgaagacagt aaatttagtc ttgattttga tgaatttaaa gctatggtag
      901 atgcagtaag acaagctgaa agtgctttag gcgatggtaa gttagatcta gatgaaaagg
      961 cgcttaaaaa ccgtgttttt gcaagaagct tatatgcaag taaggatatc aaaaaaggtg
     1021 aaatgttcag cgaagaaaat gtaaaatccg tgcgtccttc ttttggacta catcctaaat
     1081 tttatcaaga acttttagga aaaaaagcta ctaaagatat agaatttggt gatgctttaa
     1141 aacaagg
//
LOCUS       DARBAC010000162         1139 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.162, whole genome shotgun sequence.
ACCESSION   DARBAC010000162 DARBAC010000000
VERSION     DARBAC010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.162"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            63..>1139
                     /locus_tag="SB799_001666"
     CDS             63..>1139
                     /locus_tag="SB799_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868885.1"
                     /translation="MSIFSINDNSNYNSILSQSKANKESKENSKISFANAFLKQNASK
                     LNEIQSANSQTLARSEVLNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKY
                     KQADISNNTAYGYSVDKDGYMGSDFNKAAGLPEDFKIHKSTLDEIERVAEYNVSDIRE
                     YLGVDKYYSNIDMAETIKQYYNLFSNALGQSFPSDKTSFSEADINSMPSGYAVGGDKC
                     MNFNDPNNRMNITGLKDFSNSLISNVYKTHEQAKEADDLWVDSGYMIDGLLPKTLGLS
                     LEEIKNVSKGEDWQFNPDMSVYPQNEDGSYSKEALFMSFLKAQNGQPVESPKTTLNPT
                     IEAYNRAMTKESFSTTSVDLTDIMT"
BASE COUNT          453 a          136 c          181 g          369 t
ORIGIN      
        1 ttgcttatat tattttaata tatttagatt gaaggcaaaa aaatctaaat caaggaatta
       61 atatgagtat ctttagtatc aatgataact caaactataa ttctatactt tcacaaagta
      121 aagccaataa agaaagtaaa gaaaattcta aaataagttt tgctaatgct tttttaaaac
      181 aaaatgctag taagttaaat gaaattcaaa gtgcaaattc acaaactcta gcaagaagtg
      241 aagtattaaa ttctactaat acaacaaata ctagcaataa cactaatttt agtataagta
      301 gtaagacaag ttctcctaat tatgatatat ctagtgaatt taaaaactct atttatactc
      361 taaaatataa acaagcagat ataagtaata atacagccta tggttatagt gtagataaag
      421 atggctatat gggaagtgat tttaacaaag ctgcaggatt gcctgaagat tttaagatac
      481 ataaatctac tttggatgag atagagagag tggctgaata taatgtttct gatataagag
      541 aatatctagg tgtagataaa tattattcta atatagatat ggctgaaacc ataaaacaat
      601 actacaatct tttttctaat gctttaggtc aaagttttcc aagtgataaa acaagtttta
      661 gtgaagcaga tataaattct atgcctagtg gatatgctgt aggtggagat aaatgtatga
      721 attttaatga tccaaataat agaatgaata ttacaggttt aaaagatttt tcaaattctt
      781 taatttcaaa tgtttataaa acccatgaac aagcaaaaga agctgatgat ctttgggttg
      841 attcaggata tatgattgat ggattattgc ctaaaacttt aggtttatcc ttagaagaaa
      901 tcaaaaatgt ttctaaaggt gaagattggc aatttaatcc tgatatgtca gtttatccac
      961 aaaatgaaga tggaagttat tctaaagaag ctttgtttat gagtttttta aaagctcaaa
     1021 atggacaacc tgttgagagt ccaaaaacca cacttaatcc aacaatagaa gcttacaata
     1081 gagctatgac taaggagagt ttttcaacca ctagcgttga tttgactgat atcatgaca
//
LOCUS       DARBAC010000163         1120 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.163, whole genome shotgun sequence.
ACCESSION   DARBAC010000163 DARBAC010000000
VERSION     DARBAC010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.163"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..83
                     /locus_tag="SB799_001667"
     CDS             <1..83
                     /locus_tag="SB799_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868886.1"
                     /translation="SKEFDKICEQNLLLLDLNDFKILLEE"
     gene            87..1106
                     /gene="flgS"
                     /locus_tag="SB799_001668"
     CDS             87..1106
                     /gene="flgS"
                     /locus_tag="SB799_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HEG0868887.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSAIDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASCDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
BASE COUNT          409 a          130 c          205 g          376 t
ORIGIN      
        1 ttagcaagga atttgataaa atatgtgaac agaatttgct tttacttgat ttgaatgatt
       61 ttaagatttt attagaggaa tgataaatga atgaaagtat tttaaaaagt ttagactcaa
      121 atgaaaaaga aaccctacaa aaaggcttag aaagtcttat agaacaaact tatgtaatag
      181 aaaatgaata caaaacttta aatgaaaact ataattcctt acgcgcaatg gttgatgaga
      241 ttatagaggt gttgcctagt gcactttgga ttttagataa agaaaaaaat attattttac
      301 aaaatcaaga agccttgaaa aatccaaaat tacttagtat cattagtctg gataaaattc
      361 gtgatgagct tgaatttgaa ggtaggtttt atgcggtaaa aatcatagca cataatgaaa
      421 aaactatagt ttcagctata gatattagcg atgaaaaacg caatgaaagg cttgcaagta
      481 tgggtagtgt agcggctcat ttggcacatg agataagaaa tcctattgga tctatatctt
      541 tacttgcttc aactcttttt gctcgtagtg agcttaaaaa taagcatata gttcttgaaa
      601 tccaaaaggc tattgctaga gtagagcgta tcgtaaattc aactttactt tttactaagg
      661 gtgtgcacat caatgcttta aattttaatc ttttagagtt aaaagaagag tgtgaaagtg
      721 ccattaactc ttataatttc acttctcaaa tagactttga aatatctttt ttggataagc
      781 agatttgtgc tgataaagct cttcttggtt tggttttgca aaatttgatt tataatgcta
      841 ttgatgcgat agaagaaagc gaatgtgaaa agcctatgat taaaatttta gcaagttgtg
      901 ataatgaaaa aatatgcatc agagtgtatg ataatggttg tgaaataaaa gatgagaaat
      961 tggtttttga agcttttaaa acaacaaaac ttaaaggcaa tgggcttggc ttgtctcttt
     1021 ctaaagaaat cataaacgct cataagggag agttaagttt tcaaagcgat cctaagaatt
     1081 tttattttac cttgcctttg gtgtgataaa tattttcttt
//
LOCUS       DARBAC010000164         1118 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.164, whole genome shotgun sequence.
ACCESSION   DARBAC010000164 DARBAC010000000
VERSION     DARBAC010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.164"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..458)
                     /locus_tag="SB799_001669"
     CDS             complement(<1..458)
                     /locus_tag="SB799_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEG0868888.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVEKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     ENELLKMLPFLEQNYKIIIAKTPLHTHPLCGFYHSSLAQTCKNFLEKNEQ"
     gene            520..>1118
                     /locus_tag="SB799_001670"
     CDS             520..>1118
                     /locus_tag="SB799_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HEG0868889.1"
                     /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRKRFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDKKNLIIEALRHIDKSYRVVKPNVILEPLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQ"
BASE COUNT          418 a          143 c          154 g          403 t
ORIGIN      
        1 ttttgttcat ttttttctaa gaaattttta caagtttgag ctaaagagct gtgataaaag
       61 ccacataagg gatgtgtatg taaaggggtt ttggctatga ttattttata gttttgttct
      121 aaaaaaggaa gcatttttaa aagctcattt tcacctactt taggactatc tacacttaaa
      181 acaaaaacaa attcattttt aaaatttgaa agtatagagt aaagcgcaag cataggagag
      241 taaacttcaa attctaaaga atcttttatc aagctaaaat ggttttcaaa tttgtcttct
      301 ttcgcactca catagacatt tttaaaaatt ttagaaaatt tctctacttg aaattgagtt
      361 aaattttgat ttttaagaat caatttgctt ttatcttgtc ccatacgact agatttgcca
      421 ccacataaaa tcacgcaatt tagctcatta agctgcacaa atttcctttt ttaatgtaat
      481 tctaccacaa attcgccaaa atattttata atttctttta tgaaatacac agaactttta
      541 caattgcaaa cttttttttc tcagtttaaa aaaatcgatt ttatcaagcg tatcaatgac
      601 aatattttgg aattaagctt tgatagaaaa agatttattt ttgatcttac tcgtgcaatg
      661 agtgcgattt atacagctaa atttaatgca aaaaattata atgcaccttt tgattttatg
      721 cttaaaaagt attttagcaa tgcttttata aaggaagtta aagtccttga aggcaatcgt
      781 attttatgtt ttagcgtaaa agctaataag gcttataaaa gctatgagag caagatttat
      841 tttgaattta cgggtaaaaa taccaatgtt attcttacag ataaaaaaaa tttgatcata
      901 gaggctttaa ggcatattga taaaagttat cgtgttgtaa aacctaatgt gattttagag
      961 cctttaaagc cttataaaat ggatgaaaat tttgaggaaa tcaaagactt tgcagattat
     1021 ttttctcgca aatttacaag catttatgag agtaaaatca aacaaataaa aaatttaaaa
     1081 cttgcacaag tagataaaaa aatacaaaat ttacaaga
//
LOCUS       DARBAC010000165         1088 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.166, whole genome shotgun sequence.
ACCESSION   DARBAC010000165 DARBAC010000000
VERSION     DARBAC010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.166"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>1088)
                     /gene="nspC"
                     /locus_tag="SB799_001671"
     CDS             complement(<1..>1088)
                     /gene="nspC"
                     /locus_tag="SB799_001671"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HEG0868890.1"
                     /translation="RKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCS
                     GLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSL
                     GLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEA
                     VLKVFKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGE
                     AVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENE
                     KISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNG
                     IRLPNLMLLDHKNELQMIREFSYKDYSL"
BASE COUNT          342 a          209 c          143 g          394 t
ORIGIN      
        1 ttaaagaata atccttataa gaaaattctc ttatcatttg aagttcattt ttatggtcta
       61 aaagcatgag atttggaagt cttataccat taaaagttgt gtttttcaca atggtgtaat
      121 gaatttgatc taaaaaaaca attttatcgc cgattttaag ctttttatca aaagcgtact
      181 ctcccattac atcacccgct aaacaagtat ttccagtaag taaataggca aattcgtttt
      241 cttttaagtc tgaaattttt tcattttctc ttgtggctaa aattctagca tttaaaactt
      301 cacttgtata aggcatgatg atagtatctg gcatatgtgc ttcgcttgaa gtatctaaaa
      361 tggcaatttg tttttcattt tctatgatat ctactacact agcaaccaaa tttcctgttt
      421 gccaacctac cgcttcacct ggttcaagat aaacttgtac accatattta tcgctgaaat
      481 ttttacacaa agcaataagt ttttcaacat catagccttt tttggtgatg tgatgtcctc
      541 ctccaaaatt cacccatttc atttgcccta tccatttacc aaatttctct ttaaagacct
      601 ttaaaacagc ttctaaagcg tcagcacttt cttcacaaag tgcgtgaaaa tgaagtcctt
      661 ctatagcatt taaatccaca ttttcaaaat ctttagcacg aattccaagt cttgagtatc
      721 ttccacaagg attgtaaagt tcttttgggg ctagagaaaa ttcaacattg caacgaagac
      781 ctaaggaatt tttttgtgtt ttgctttgaa atttatgaaa ttgagctaaa gaattaaaca
      841 ctatatgatg agataaactg gctatttcac ctatttcatc ttctttaaaa gcaggtgaat
      901 aagtatgaat ttctttatcc atgtattctt tagcaaattt tgcttcccaa agtccgctac
      961 aagtacaacc ttttaggtat tctccaacaa ttttcatcgc tcctgaaaaa gcaaaacctt
     1021 ttaaagctaa aagcacttta gcaccacttt tttcaccaac acttgctaaa agctcacagt
     1081 tttttctt
//
LOCUS       DARBAC010000166         1036 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.167, whole genome shotgun sequence.
ACCESSION   DARBAC010000166 DARBAC010000000
VERSION     DARBAC010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.167"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            90..>1036
                     /locus_tag="SB799_001672"
     CDS             90..>1036
                     /locus_tag="SB799_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEG0868891.1"
                     /translation="MQKMNSGKSVGISAKLTLWVGILVVLILAITSTVSYFDAKNHTY
                     ELLKENQLKTMDDVKVTFENYSKSKQKAIEVLAYESAKKLEDENISLLLDSFKKAFDF
                     DIVFIAFDKNNKMLLSNGTILDKKSNFDITKQIWYQEAKNNKGITITQPYKSPIDQEI
                     GITYVFPIYKNNQLIAFVGGDYNLDKFSKDVLSLGHSSTTYAAVYDSEGRIIFHEVLD
                     RILTKNTLSVNIANAIKENPEYIDLNKRDILFPVFDDKGIKYEAMCDTSSNGLYRICA
                     VTLDSNYTSAVNSILMKQVIVGIIAIIIALILIRFLISR"
BASE COUNT          389 a          139 c          148 g          360 t
ORIGIN      
        1 taaaaaattc actttttata cgctttttct cttatttttt gctagaataa tatttttatt
       61 ttattttcaa tataaatata ggagttataa tgcaaaaaat gaattcaggt aaatccgttg
      121 gaatttcagc caagcttacg ctatgggttg gaattttagt tgtattaatt ttagcaatca
      181 caagtaccgt tagttacttt gatgccaaaa atcacacata tgaattacta aaagaaaatc
      241 aattaaaaac tatggatgat gttaaagtaa cttttgaaaa ctattccaaa agcaagcaaa
      301 aagctataga ggttctagca tatgaaagtg ctaaaaaatt agaagatgaa aatatttcac
      361 tgcttctaga ttcttttaag aaggcgtttg attttgatat tgtttttatt gcgtttgata
      421 aaaacaacaa aatgcttttg tcaaatggaa caattttaga taaaaaatca aattttgaca
      481 ttacaaaaca aatttggtat caagaagcaa aaaataacaa aggcatcaca ataactcaac
      541 catataaatc ccctatagat caagagattg gtataactta tgttttccct atttataaaa
      601 ataatcaact tatagctttc gttggaggcg attacaatct agataaattt tccaaagatg
      661 tattatcttt aggacactca tcaactactt atgctgctgt ttatgactct gaaggaagaa
      721 ttatttttca cgaagtgctt gatagaattt taacaaaaaa cactttaagc gttaatattg
      781 ctaacgccat aaaagaaaac cctgaatata tagatctaaa taagagagat attctttttc
      841 ctgtatttga tgataaaggt atcaaatatg aagcaatgtg cgatacaagt tccaatggat
      901 tatatcgtat ttgtgctgta actttagata gtaactatac ttccgctgtt aattccattt
      961 taatgaaaca agttatagtc ggtattatag ctataatcat agctttaatc ttgattagat
     1021 ttttaatcag cagaag
//
LOCUS       DARBAC010000167         1018 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.168, whole genome shotgun sequence.
ACCESSION   DARBAC010000167 DARBAC010000000
VERSION     DARBAC010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.168"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            59..>1018
                     /gene="pif1"
                     /locus_tag="SB799_001673"
     CDS             59..>1018
                     /gene="pif1"
                     /locus_tag="SB799_001673"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HEG0868892.1"
                     /translation="MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSALDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSASVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNYLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     DDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWVGSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISII"
BASE COUNT          392 a          102 c          165 g          359 t
ORIGIN      
        1 aagatttcat aatcaacctt ttagaaaaaa tagttataat taaagccaag gaaatataat
       61 gcttgataaa ctagaaaaaa ttttagctta tgataatgtt tttttaagtg gtggtgctgg
      121 agttggtaaa agctttttga caaatgagct tatcaaatct tatagaaaac aaaaaaaatt
      181 agccatagct cttggttcta gtgctctatc ggcgtttaat ataggcggtg ttaccttaca
      241 cagctttttt tgtttaggat attgtgatga tatgatgaaa ttaagcgcat tggatcgcaa
      301 tcaaaaacaa aaagaaaaat taacaaaact taaagagctt ttaaaaacga ttgagcttat
      361 tattatcgat gaaatttcca tggttagcgc aagtgttttt gaaatgatag gctttagact
      421 taaaaattct caatttaatg gaaaaatttt agttgtagga gatttttttc aactgcctcc
      481 cgtaattaaa gaaaaaaaag aaactttatt taatcattct tattatgctt tttcttcatt
      541 tttttggcaa gatttaaatt ttaagaatat taaactttct caacctaaaa gaacacaaaa
      601 tatggaattt tataactatt tatctttgat tagacaaggt tttttagatg aaaaaatttt
      661 aagctttttt gaatctttgc gaattgatta taaagaatta gaaaatttag aagatgatta
      721 tactttactt tgtggtatca ataaaaaagt aaacaatatc aatcaagaaa aattaagcaa
      781 acttgagacc ccacttgtat gctttaaggc tcaggttaaa aaagaagata agagaataaa
      841 agatgaagaa cttgattctt gggttggaag cttaaatata ttggaagaat taaatattaa
      901 aataggtgct cgtattattt tttgtgtaaa taattgggat aagaattatt ataatggtga
      961 gcaaggcatt atagaagata ttctttatga agaggagaaa atttatatta gtattatt
//
LOCUS       DARBAC010000168         1010 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.169, whole genome shotgun sequence.
ACCESSION   DARBAC010000168 DARBAC010000000
VERSION     DARBAC010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.169"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..894)
                     /locus_tag="SB799_001674"
     CDS             complement(<1..894)
                     /locus_tag="SB799_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEG0868893.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSNTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSIDETNEFLPDHMKISQKEVVSEAMNRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSTQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDTKNT
                     LKNIKNDEFAKNLTEELNIKDK"
BASE COUNT          320 a          148 c          126 g          416 t
ORIGIN      
        1 tttatctttt atatttaact cttctgttaa attttttgca aactcatcat ttttgatatt
       61 ttttaaagta tttttagtat ctgtggtatc ttcttctatt tttgatttaa ctttatcgtt
      121 tttttcgtgt ttgctttctt tggatgaaag tatggaatct aaatttttta aagtttgaga
      181 aagcaaagaa ccgctatctt tagaatttgt tttttgcgta gaatgagtgc ttgtagtatg
      241 agttgtattt tctaaattgt gatttaaatt tttactcaca ttggaaattt tattattgat
      301 gatttcttta aaaacattat ccacagcacc cttaaaaaaa tcagccttat ctaaatttgg
      361 aaaagttgct ttaagatcaa gaagacgatc tactttaata ttttttacat ttaagcccag
      421 atctttagct atgtccaaaa gctcactaag atttgatgca ccttttaaag cattaaaatt
      481 agcctctgtt ttaataagac ttgaaagttg agtagaaaga tttgctagtt taacatctgc
      541 tgtatctgtt tttagcttat ccaacaaaga aagaatttgc ataaaagaag cagattcgaa
      601 aatgcttatc ttatcactct catcaaaagc tcctttttga agtctgttca tcgcttcact
      661 aacaacttct ttttgactga tcttcatatg atcaggtaaa aattcattgg tttcatcaat
      721 agaattaagc aaagaattta aaaaactttc cgtatcatct tgagttgaat ttttactatc
      781 gctactttca tgttctttat ttttactcgt tttactaaag gaactactag tattagaagt
      841 tttactcggc gtaagattta aaacatcatt ttgcggagct aaatttgaca tcacttttcc
      901 ttcaaaaaaa attattttaa aaatttatct accattacat taggaaattt ttctttcaaa
      961 taagaatctt catatacttt aatcatctta tcttcattta aagcaattaa
//
LOCUS       DARBAC010000169          968 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.170, whole genome shotgun sequence.
ACCESSION   DARBAC010000169 DARBAC010000000
VERSION     DARBAC010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.170"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            31..>968
                     /locus_tag="SB799_001675"
     CDS             31..>968
                     /locus_tag="SB799_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HEG0868894.1"
                     /translation="MKSVKLKVALIANLIAVVCLVILGVITFMFVKQAIFHEVVKAET
                     NYVKTAKNSMESFKARNSLALESLAKSILKHPVEQLDSQDALMRYIGKDLKNFRDAGR
                     FLAVYIAQPNGELVVSDPDSDAKKVDFGTYGKADNYDARTREYYIEAVKTNKLYVTPS
                     YIDATTNLPCFTYSTPLYKDGKFIGVLAVDVLVTDLQAEFENLPGRTFVFDEENKVFA
                     STDKTLLQQGYDISAIANLAKIKENFEPFEYTRPKDGSERFAVCTKVSGAYTACVGEP
                     IEQIEAPVYKIAFIQAIVVIIVVVFSVILLYFIVSK"
BASE COUNT          345 a          117 c          179 g          327 t
ORIGIN      
        1 aaaataatat tagaaaggag cgcttaaatt atgaaaagcg taaaattgaa ggttgcactg
       61 attgcaaatt taatcgcagt agtgtgtttg gtaattttag gtgttataac atttatgttt
      121 gtaaagcaag caatttttca tgaagttgta aaagctgaaa caaactatgt taaaacagct
      181 aaaaattcta tggagtcttt taaggcaaga aattctttag ctcttgaaag tttggctaaa
      241 agtattttaa agcatcctgt agaacagtta gatagtcaag atgctttaat gcgttatatt
      301 ggaaaagatt taaagaattt tagagatgct ggaagatttt tagcagttta tatcgctcaa
      361 ccaaacggag aacttgttgt aagtgatcca gattctgatg ctaaaaaagt agattttgga
      421 acttatggaa aagctgataa ttatgatgct agaacaagag agtattatat agaagcagta
      481 aaaacaaata aactttatgt taccccatct tatatagatg caactacaaa tttaccttgt
      541 tttacatatt ctacccctct ttataaagat ggtaaattta taggggtttt ggctgtggat
      601 gttcttgtaa cagatttgca agcagaattt gagaatttac caggtagaac ttttgtattt
      661 gatgaagaaa ataaagtatt tgcttctaca gacaaaactc ttttgcaaca aggttatgat
      721 attagtgcaa ttgcaaatct tgcaaaaatt aaagaaaatt ttgaaccttt tgaatatact
      781 agaccaaaag atggtagtga aagatttgct gtgtgtacaa aagtttctgg ggcttatact
      841 gcttgtgttg gagagccaat agaacaaata gaagctccag tttataaaat tgcatttatt
      901 caagccattg ttgtcattat tgtagtagta tttagcgtaa tcctacttta tttcatcgta
      961 tcaaaata
//
LOCUS       DARBAC010000170          937 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.171, whole genome shotgun sequence.
ACCESSION   DARBAC010000170 DARBAC010000000
VERSION     DARBAC010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.171"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..490
                     /locus_tag="SB799_001676"
     CDS             <1..490
                     /locus_tag="SB799_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868895.1"
                     /translation="SIKSIEKIQKTEPKIQNSQTIEKRPDIKKQPDIKQSLENLQKKI
                     TPQENKQELPKPSNQAQEKQQNDEDAQKAKNVLLEGFSNATKEDRNLNFNHLLFAALL
                     VSFALFLFAPQIYIRNQIYYLSREIATLRTEESVLNEENKDLKRRLENMRFQNQILDY
                     LE"
     gene            complement(478..>937)
                     /locus_tag="SB799_001677"
     CDS             complement(478..>937)
                     /locus_tag="SB799_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868896.1"
                     /translation="LFKVSEQPVLVKDLLEANALFNDGMLVDPSKLNFNFKILNSYIY
                     FGVFCAVVLLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFKVYTRKIISKKI
                     IQKAWALHFPYFAYEKYSIMAGEIYKEALKEEIPKANLEQYVLDKIIHSK"
BASE COUNT          405 a          143 c          109 g          280 t
ORIGIN      
        1 atccataaaa tctatagaaa aaattcaaaa aaccgaacct aagatacaaa attctcaaac
       61 tatagaaaaa cgacctgata ttaaaaaaca acccgatatt aaacaaagtt tggaaaattt
      121 acaaaaaaaa ataacaccac aagaaaataa acaagaactt ccaaaaccat ctaatcaagc
      181 tcaagaaaaa caacaaaatg atgaagatgc tcaaaaggca aaaaatgttt tactagaagg
      241 cttctctaat gccaccaaag aagatagaaa cctaaatttc aatcatcttc tttttgcggc
      301 tttacttgtt agttttgcgt tatttttatt tgctccacaa atttatatta gaaatcaaat
      361 ttattatctt agtagagaaa ttgctacatt aagaacagaa gaaagcgttt taaacgaaga
      421 aaataaagat ttaaaaagaa gacttgaaaa tatgcgattc caaaatcaaa ttttagatta
      481 tttagaatga ataatcttat ctaaaacata ctgctctaaa tttgcttttg gaatttcttc
      541 ttttaaggct tccttataaa tttcacctgc cattatagag tatttttcat aagcaaaata
      601 agggaaatgc aaagcccaag ctttttgtat tatttttttt gagattattt tgcgagtata
      661 aactttaaaa atatcatatc ctataaatac acaagcagta accataacag cactcactat
      721 gcttatatga aagtcaagtt ttgttaaaaa ataatgagta attaaaagca atggtaacaa
      781 aaccacagca caaaaaacac caaaataaat ataagaattt agaattttga aattaaaatt
      841 tagcttagaa ggatctacaa gcataccgtc attaaaaagt gcatttgcct ctaataaatc
      901 cttcactaaa acaggttgtt ctgatacttt aaataaa
//
LOCUS       DARBAC010000171          882 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.172, whole genome shotgun sequence.
ACCESSION   DARBAC010000171 DARBAC010000000
VERSION     DARBAC010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.172"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..850)
                     /locus_tag="SB799_001678"
     CDS             complement(<1..850)
                     /locus_tag="SB799_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002875309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868897.1"
                     /translation="MLIEFRVENFLSIQDEQILSMMASKDNTFFDSHTNGDKKLALLK
                     SSVIYGANASGKSNIVKALQTMKTIVISSANTQRGDKLPITPFLLGDEDDKPTKFEII
                     FIQNDTKYQYGFILNSEKILEEWLLTFDENNTEQNWFERIYNKKEGRYNYSFGDQFLA
                     DEIYKQLWENSTRDNALFLSVAIQLNNEQLKPVFDFFNLKLQIANSNGWGNGKSITIN
                     EYKKDKELVNSFFKIADLDIEGVEIKTSDIDENSLPSNLQNIPQELKEKIIQEVKNIQ
                     NLKNVKI"
BASE COUNT          278 a          137 c           96 g          371 t
ORIGIN      
        1 gtatttttac attttttaaa ttttgaatat ttttaacttc ttgaatgatt ttttctttga
       61 gttcttgtgg aatattttga agatttgatg gtaatgagtt ttcatcaata tcgcttgttt
      121 taatctctac accttctata tctaaatcag ctattttaaa aaaactattg actaattctt
      181 tgtctttttt atattcatta atcgtgatac tttttccatt accccaacca tttgaatttg
      241 ctatttggag tttaagatta aaaaaatcaa atacaggttt taattgctca ttatttaatt
      301 gaatagccac agataaaaac aaggcattat ctctagtgct attttcccat agttgtttat
      361 aaatttcatc agctaaaaat tgatccccaa aagaataatt atatcttcct tcttttttat
      421 tataaattct ttcaaaccaa ttttgctcgg tattattttc atcaaaagtt aaaagccatt
      481 cttctaaaat tttttcagaa tttaaaataa agccatattg atactttgtg tcattttgta
      541 taaaaataat ttcaaatttt gtaggtttat catcttcatc ccctagcaag aaaggtgtta
      601 taggtaactt atctcccctt tgcgtatttg cgcttgatat aacgatggtt ttcatagttt
      661 gcaaagcttt tacaatattc gattttccag aagcatttgc cccataaatc acactacttt
      721 ttagcaaagc taatttttta tcgccattgg tatgagaatc aaaaaaagta ttatccttgc
      781 ttgccatcat acttaaaatt tgctcatctt gaatggataa aaaattttct actctaaatt
      841 ctataagcat attttttcct acttttttct taaaatatat ag
//
LOCUS       DARBAC010000172          848 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.173, whole genome shotgun sequence.
ACCESSION   DARBAC010000172 DARBAC010000000
VERSION     DARBAC010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.173"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            21..446
                     /gene="exbB"
                     /locus_tag="SB799_001679"
     CDS             21..446
                     /gene="exbB"
                     /locus_tag="SB799_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEG0868898.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            439..828
                     /gene="exbD"
                     /locus_tag="SB799_001680"
     CDS             439..828
                     /gene="exbD"
                     /locus_tag="SB799_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HEG0868899.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
BASE COUNT          313 a          112 c          124 g          299 t
ORIGIN      
        1 gtatattttt ggagaaaaat gtggaatttc taaaagatta catcgattta attatctttt
       61 taattctagg aattatggca tttatagctt tttggtgtgt cgtagaaaga atgctatttt
      121 ttagaaaaat taactttaaa aattatgaga atcaagagca atttgatgat gcgattagtg
      181 aaaatttaac cactatatat atcatctatt ccaatgctcc ttatatagga cttttaggca
      241 ctgtaatagg catcatggtt acattttacg aaatgggctt ggcgggtaat atagatgtca
      301 aatctatagt cgtgggactt tctttagctc ttaaagctac agccttagga cttttggttg
      361 ctattcctgc tttaatggct tataatgcct tacttagaaa agtttccctc ttaagcaatg
      421 cttataaggc aaataaaaat gcttaaacta ccaaaaaatg aaggtttaaa tatagttcca
      481 tttatagaca ttatgcttgt tttgcttgct atagtgctta gtatttcaac ctttattgcg
      541 catggaaaaa ttcaaatctc acttccttca agtgaaaatg ctaccaatat aagcaataat
      601 gaaaaaaaac ttcttataac catagacgaa aaaaatactt tttatttaaa tgataaatta
      661 gctgatttaa atgaagttca aaatgctatt ttttcacttg ataaaaaaac catagtagaa
      721 ctaaaaagcg ataaaaatgc taaatttgaa agctttgtaa aaattataga ttttttaaaa
      781 gccaaagaac atgaaaattt tcagattctt actgagaaaa acaaatgaaa actttatttt
      841 taaatcat
//
LOCUS       DARBAC010000173          832 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.174, whole genome shotgun sequence.
ACCESSION   DARBAC010000173 DARBAC010000000
VERSION     DARBAC010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.174"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..479)
                     /locus_tag="SB799_001681"
     CDS             complement(<1..479)
                     /locus_tag="SB799_001681"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868900.1"
                     /translation="MLSKEIGDYIALHIRSGDIVHSDRNIGYFAFGKAVSIHIAYDII
                     LNKIDKNDKIIVFGDDIESLYVLKNSVSFFRDIILADELADCVDKIERSIFEIILMSN
                     SQKIYASGKSGFSKLASIISNVNKLMPINLLYSFKEKKTAILTHMEKINISELQKAFS
                     "
BASE COUNT          314 a          132 c           73 g          313 t
ORIGIN      
        1 gaaaaagctt tttgtaattc tgagatatta attttttcca tatgagttaa aatagctgtt
       61 ttcttttctt taaatgaata taataagtta attggcataa gtttatttac attgctaatt
      121 atagaagcta atttcgaaaa accagatttg cctgatgcat aaattttttg agagttagac
      181 attaaaatta tttcgaaaat acttctctca attttatcaa cgcaatctgc caattcatcc
      241 gccaaaataa tatctctaaa aaaactaaca ctatttttca aaacatataa actttcaata
      301 tcatcaccaa aaactataat tttatcattt ttatcaattt tgtttaaaat aatatcatat
      361 gctatatgta tacttacagc ttttccaaaa gcaaaataac caatatttct gtcagagtgt
      421 acaatatcac cacttcttat atgtaaggca atataatccc caatttcttt cgataacata
      481 tcagctttag caatcgtatt ctttatttta ttcgagaaac caatactctt ccagcaagat
      541 tttaagattt cataataatt tccataatta aaatcggtaa atatataatt aaaatcatac
      601 tgagaacaag ttaaacccca ttcaaactca tcgtaatatc cgttttttag cttttcgaaa
      661 ctataacaac gatttttatg aaaatcccat aagaaaaaat tatattattt ccaaaattat
      721 ccttaagttt atttttaaaa gaatatttac ccctaaattc aggattaaaa atcttttctt
      781 cttcgtctaa ataatcatga gacaaaagaa ttgttttatt tcctagataa tt
//
LOCUS       DARBAC010000174          820 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.175, whole genome shotgun sequence.
ACCESSION   DARBAC010000174 DARBAC010000000
VERSION     DARBAC010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.175"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(133..>820)
                     /locus_tag="SB799_001682"
     CDS             complement(133..>820)
                     /locus_tag="SB799_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheR"
                     /protein_id="HEG0868901.1"
                     /translation="ALKLNKFLEGTNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYF
                     LRELAQLKEIIYYAKSLEKRVNILSAPCSSGEEVYSLALLAAQNFIKDMYILGIDINS
                     SVIEKAKLGKYQGRTLQRLSESEKRRFFLESEDKFYTINKNELCTCKFELCNVFEEKF
                     SRLGKFDIIASRNMIIYFDHESKLKLMERFHRILNDKGRLYVGNADLIPETIYFKKIF
                     SPRGVYYEKV"
BASE COUNT          289 a          130 c           72 g          329 t
ORIGIN      
        1 ttttccttta tttttaacta aatataaaat taattaaaat tattttatca ttaaataaag
       61 aaaactactt caaaatgtaa cttattttta ctaataaatt tctaaagtgt aacttttagt
      121 aatttttaga atttatactt tttcatagta aacacctctt ggagagaaaa tctttttaaa
      181 ataaatagtc tctggaatta aatcagcatt gccaacataa agccttcctt tatcatttaa
      241 aattctatga aatctctcca taagttttag ttttgattca tgatcaaaat aaataatcat
      301 atttctagaa gctataatat caaattttcc caatcttgaa aatttttctt caaaaacatt
      361 gcaaagttca aatttacaag tacaaagctc atttttatta atagtataaa atttatcttc
      421 gctttctaaa aaaaaccttc ttttttcact ctcgctcaat cgctgtaaag ttcttccttg
      481 atattttcca agttttgctt tttcaatcac gcttgaatta atatcaatgc ctaaaatata
      541 catatcttta ataaaattct gtgcagccaa taatgccaaa gaatatacct cttctccact
      601 tgaacaaggg gcacttagga tatttactct cttttctaag cttttggcat aataaattat
      661 ttctttcaat tgagccaatt ctcttaaaaa ataagtttca cctatggtta caaaatctaa
      721 agtttcttgt ttaagttgtc tattgctttt taattttccc aaaaattcgg aaaaattttt
      781 agtattagtt ccttcaagaa atttattcaa ctttaaagct
//
LOCUS       DARBAC010000175          782 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.176, whole genome shotgun sequence.
ACCESSION   DARBAC010000175 DARBAC010000000
VERSION     DARBAC010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.176"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>782
                     /locus_tag="SB799_001683"
     CDS             <1..>782
                     /locus_tag="SB799_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868902.1"
                     /translation="FSYTLALALGFKNIIMIGQDLAFDEKGNSHSKGFDFGEKFSGEE
                     NIDKLKVPAYAGKGEVLTHITWNDYRIKLEYLFACNDQKAKFYNATEGGARINFTEEL
                     SFKECCEKLLTKEKPKFELPKSLTKNRSDKLLVKFKEKIQKDQENAKRFLDDALALKQ
                     ILENILSKDFLLPLEFLEKVYQNIENFNHNLDTDEFIQDEVLRGAFAYRGKMIADVLK
                     LHIKDKIHFITSYIKAYHEWLLYFIEKLGQRINIIINSFKET"
BASE COUNT          308 a           96 c          122 g          256 t
ORIGIN      
        1 tttttcttat actttagctt tggctttggg atttaaaaat attattatga tagggcaaga
       61 tttagccttt gatgaaaaag gaaattcaca ctcaaaaggt tttgattttg gggagaaatt
      121 tagcggtgaa gaaaatatag ataaacttaa agtccctgcc tatgcaggta aaggtgaagt
      181 tttaactcat ataacctgga atgattatcg tataaaactt gaatatcttt ttgcttgcaa
      241 tgatcaaaag gctaaatttt acaatgctac tgaaggtgga gcaaggatta atttcactga
      301 agaactttcc tttaaagaat gttgtgaaaa actccttaca aaagaaaaac ccaaatttga
      361 acttccaaaa agtttaacta aaaatagaag tgataaactc ctagttaaat tcaaagaaaa
      421 aatacaaaaa gatcaagaaa atgccaaaag atttttagac gatgccttag ctttaaaaca
      481 aattttagaa aatatactca gtaaagattt tcttttacct ttagaatttt tagaaaaagt
      541 ttatcaaaat atagaaaatt ttaatcataa tttagataca gatgagttta tacaggatga
      601 agttttaaga ggagcttttg cttatcgtgg aaaaatgatt gctgatgtat taaaacttca
      661 tatcaaagat aaaatacatt ttatcacatc ttacatcaag gcttaccatg aatggttgct
      721 ttattttata gaaaagttag ggcaaagaat aaatattatc atcaattctt ttaaggaaac
      781 cc
//
LOCUS       DARBAC010000176          724 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.177, whole genome shotgun sequence.
ACCESSION   DARBAC010000176 DARBAC010000000
VERSION     DARBAC010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.177"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(66..593)
                     /gene="tpx"
                     /locus_tag="SB799_001684"
     CDS             complement(66..593)
                     /gene="tpx"
                     /locus_tag="SB799_001684"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEG0868903.1"
                     /translation="MSTVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLVNEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
BASE COUNT          238 a          151 c           77 g          258 t
ORIGIN      
        1 tcaacttaaa ataataaaaa aatgaagatg taaaaattaa gccctaagaa tgggcttaat
       61 caaaattaat ggcaaccaca accaccgcag cagctagaac caccaaaaaa tgcatcaagt
      121 tttgcaatat ctggcatttc tgtgatttca tttacaagtt ctttatatgc cactttaccc
      181 tctttaatca caaatacggc acgagctaaa agcccttcta aagcaccttc atttaccaaa
      241 acaccatatt tttcaccaaa ttcttttgcc acaaaatcac ttgcaacact taaattttca
      301 ataccttctg tactgcaaaa tcttcccata gcaaaaggta agtccatact tactacaatc
      361 acttcagcac cattgtaact ggctactttt ttattaaatt ctctagcttc tgtagcacaa
      421 actggtgtat ctaagcttgg aacacttaaa atgatttgag ttttacccgc tgcaccgatt
      481 tcaatcacgc ttaaatcttt agctttaaga tttaccttag gagcatctgc tccaacttct
      541 actgaatttc ctttaagttt tacaggattt cctttaaaat ttactgtact catttaattt
      601 ccttttttga tattttaaac attattgcaa ttaatgtttt aggagtgatt atatcctata
      661 aatattaatt atttttaatt tcactgaaaa ttattttact tctttccaag tatatttttt
      721 ccac
//
LOCUS       DARBAC010000177          722 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.178, whole genome shotgun sequence.
ACCESSION   DARBAC010000177 DARBAC010000000
VERSION     DARBAC010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.178"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            95..505
                     /gene="perR"
                     /locus_tag="SB799_001685"
     CDS             95..505
                     /gene="perR"
                     /locus_tag="SB799_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HEG0868904.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYTEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCAKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDSCKKCH"
BASE COUNT          295 a           78 c           91 g          258 t
ORIGIN      
        1 tatcattaaa taataaaaaa tattatttaa tataaacttc ttttaataaa aattttatta
       61 ttatttttac ttaaaaaagc aaggaataaa taaaatggaa ttactacaaa tgcttaaaaa
      121 acatgagtta aaagctactc cgcaaagact atgtgtttta aaaattttaa aaagacatga
      181 gcatcctaat attgatgaat tatatacaga aattaaaaaa gaataccctt caatctcttt
      241 agcgacggtt tataaaaatc ttaatacttt acaagaacaa ggtttagttg ttgaaatcaa
      301 tgttttaaat caaaaaactt gttacgatat ttatgaagaa gaacatattc atgttgtttg
      361 cgccaaatgt ggtggtatag aggatttaag ttttaaagat gctaagcttt atgaatatca
      421 agagcattta gaaaaaaaga taggcaatct cgtcaatcat ctgtctgttt gtgcttatgt
      481 tgatagttgc aaaaagtgtc attaagcaaa ataaggttaa aataacccat atattttaag
      541 ggttatttta atggtttatg aaattcaaaa aaacttttta ctatctgatt gcactctttt
      601 agagaattta aaaaaagata atataccttt tcgaaattct aaatttgaaa ctttttatac
      661 tcaaataact tcaaatcata gtgttaaatt tcaaagtttt tgcaatgaat tttataaaat
      721 ta
//
LOCUS       DARBAC010000178          707 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.179, whole genome shotgun sequence.
ACCESSION   DARBAC010000178 DARBAC010000000
VERSION     DARBAC010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.179"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            10..>707
                     /locus_tag="SB799_001686"
     CDS             10..>707
                     /locus_tag="SB799_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEG0868905.1"
                     /translation="MSLSKLFDFYSVFEGFEKLNILNFEDDIFTNIERILLDDYLKIK
                     SYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTLKYLLETGIIKLEYSKEAKK
                     IKDKRQKIKKELRSYVVQDKIIFSSHFTRFFFYFLKPNEKLILQNRYKEVLECIKEKF
                     ELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYYQDENLCFVGEVKFKNKKIC
                     KNILNLLKSKAKSL"
BASE COUNT          280 a           71 c          100 g          256 t
ORIGIN      
        1 cataagaatt tgtctttaag caagcttttt gatttttata gtgtgtttga aggttttgaa
       61 aaattaaaca ttttaaattt tgaagacgat atatttacaa atatagagcg aattttgctt
      121 gatgattatc taaaaattaa aagttatttt gccttggatg aaacaagttc ttacgctctt
      181 actttgctag ctaaaaacaa tcgtaagcgt ttttctatca atagaaaaat tcaacatttt
      241 aaagctttat ctacacttaa atatctttta gaaacaggta taataaaact tgagtatagt
      301 aaggaagcta aaaaaataaa agataaaaga caaaaaatca aaaaagaact aagatcttat
      361 gttgtccaag ataagattat atttagcagc cattttactc gtttcttttt ttatttttta
      421 aagcccaatg aaaagcttat tttgcaaaat cgttataaag aagttttaga atgtattaag
      481 gaaaaatttg aactttatca aagtttttgt tttgaacagc tttctagaga attgcttgag
      541 aaaaaattca atatcaatgg agtgcaaagt tactgggata agaatttaga acttgatctt
      601 tattatcaag atgaaaattt gtgttttgtc ggagaggtta aatttaaaaa taaaaaaatt
      661 tgtaaaaata ttttaaatct tttaaaatca aaagcaaagt ctttaaa
//
LOCUS       DARBAC010000179          701 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.180, whole genome shotgun sequence.
ACCESSION   DARBAC010000179 DARBAC010000000
VERSION     DARBAC010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.180"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>701)
                     /locus_tag="SB799_001687"
     CDS             complement(<1..>701)
                     /locus_tag="SB799_001687"
                     /inference="COORDINATES: protein motif:HMM:NF013652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HEG0868906.1"
                     /translation="ILTNGISQINKEKIALLKYIKYFSISYIFIDETYISDIPNSSQK
                     HIKNCTNFRFFTAKALQNIDKCIFLDADLIVESNLLDLWNTDIDDYFMACVPDMYPRI
                     YKDNWTNNLPLNGSIYVNTGVCLFNLKKWRENNVEQKFFINSALYYKLLYYPDQDILN
                     ITFQNKIKYLNEQWNTIVMFKHNHIPQIIHWAGYEKPWKFPNIIYADKFWFYAQFTAF
                     YELILFDNIIANNNN"
BASE COUNT          275 a           93 c           70 g          263 t
ORIGIN      
        1 aaattattat tatttgcaat tatattatca aataaaatca attcataaaa agctgtaaat
       61 tgagcataaa accaaaactt atcagcataa ataatattgg gaaatttcca tggcttttcg
      121 taaccagccc aatgaattat ttgtggaata tgattatgtt taaacataac gatagtattc
      181 cattgctcat taagatattt tattttattt tggaatgtaa tatttaatat atcttgatca
      241 ggataataca ataatttata atataatgcc gaattaataa aaaatttttg ttcaacatta
      301 ttttctctcc atttttttaa attaaacaaa caaactccgg tattaacata aatactacca
      361 tttaatggca ggttatttgt ccagttatct ttatatatgc gagggtacat atctggcaca
      421 caagccataa aataatcatc aatatcagta ttccataaat ctaataaatt gctttcaaca
      481 attaagtcag catccaaaaa aatacactta tcaatatttt gcaatgcttt tgcagtaaaa
      541 aacctaaaat ttgtacaatt ttttatatgt ttctgagaac tatttggtat atccgaaata
      601 taagtttcat caataaaaat atatgaaata ctaaaatatt taatatattt caacaatgca
      661 attttttctt tattgatttg agatatacca ttagttaaaa t
//
LOCUS       DARBAC010000180          647 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.181, whole genome shotgun sequence.
ACCESSION   DARBAC010000180 DARBAC010000000
VERSION     DARBAC010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.181"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..563
                     /locus_tag="SB799_001688"
     CDS             <1..563
                     /locus_tag="SB799_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868907.1"
                     /translation="DFAYEKKPNKDFKIQEVKLVQFSQENKDCLELLIEAGQVRILNS
                     YNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINENLQNLKNTMQDIMIYYKLRYSFSK
                     DVKDMSKNKNLDILNIDEKDGGTLLYKINNQACVGIELTRHDSRMAMKIYGIENLDKE
                     CKLFIQSPSFKDLSYTKKDFKWYYLE"
     gene            complement(541..647)
                     /locus_tag="SB799_001689"
                     /pseudo
     CDS             complement(541..647)
                     /locus_tag="SB799_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344278.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          279 a           68 c           86 g          214 t
ORIGIN      
        1 atgattttgc ttatgaaaaa aaaccaaata aagattttaa gattcaagaa gttaaattag
       61 tgcaattttc acaagaaaat aaagattgcc ttgaactttt aatagaagct ggtcaagtta
      121 gaattttaaa tagctataat tcttgtcaaa aattatctaa agatgaaagt tttcaaaaat
      181 ttcttaatga agatttttta aaactttata aaaataatgg atacttgatt aatgaaaatt
      241 tacaaaattt gaaaaatacc atgcaggata ttatgatata ttataaactc cgatattctt
      301 ttagtaaaga tgtaaaagat atgagtaaaa ataagaattt ggatatttta aatatagatg
      361 aaaaagacgg tggcacttta ctttacaaaa tcaacaatca agcttgcgtt ggaatagaac
      421 ttacaagaca tgactcaaga atggctatga aaatatacgg aatagaaaat ttggataaag
      481 agtgcaaact atttatccaa tcaccttctt ttaaagatct ttcctacaca aaaaaagatt
      541 ttaagtggta ttatttagaa taaataaatg ctttaatttt taaataaaaa tttttaaaaa
      601 tcgcgcttaa agtaaaagta tcttgccttc caagattttg aaaaaca
//
LOCUS       DARBAC010000181          629 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.182, whole genome shotgun sequence.
ACCESSION   DARBAC010000181 DARBAC010000000
VERSION     DARBAC010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.182"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..512
                     /locus_tag="SB799_001690"
     CDS             <1..512
                     /locus_tag="SB799_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868908.1"
                     /translation="KHNKIKISISFKIILIFIFSFSLSMMILLFKDFIEYKQNKEIQN
                     KNFIIQEEISKLKQDKQKLLTNIQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKA
                     IILNQIISWLNSNELKITNLEFKQTKIILSFIDENHFKKALENLNLTFKILDKNEETF
                     NIILEVIHE"
BASE COUNT          276 a           81 c           46 g          226 t
ORIGIN      
        1 tcaagcataa taaaataaaa atatctattt cttttaaaat tatattaata tttattttta
       61 gctttagtct tagtatgatg attttattat ttaaagattt tatagaatac aaacaaaata
      121 aggaaattca aaataaaaat tttatcatac aagaagaaat ttctaaacta aaacaagata
      181 agcaaaaatt attaacaaac atacaagatt taaactttac tctttctaat aaaatatcat
      241 ctacacaaca acaatttcat attttatcca ccataacaaa agaaatcaat ttagacaaaa
      301 ataaagcaat cattctaaat caaatcatat catggcttaa ttccaatgaa cttaaaatta
      361 caaatcttga atttaaacaa acaaaaatca ttctttcttt tatcgatgaa aaccacttta
      421 aaaaagcatt agaaaatcta aatttaactt ttaaaattct tgataaaaat gaagaaacat
      481 ttaatatcat attagaagtc atacatgaat aaaatagaag tatttttgca aaatctcaat
      541 cctagggaaa aatttctttt tatttctttt atctgccttt gtgctttgtt tttagctttt
      601 aaaattcacg atcacttttt ggaaaatat
//
LOCUS       DARBAC010000182          601 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.183, whole genome shotgun sequence.
ACCESSION   DARBAC010000182 DARBAC010000000
VERSION     DARBAC010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.183"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..213)
                     /locus_tag="SB799_001691"
     CDS             complement(<1..213)
                     /locus_tag="SB799_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868909.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDA"
     gene            complement(361..>601)
                     /locus_tag="SB799_001692"
     CDS             complement(361..>601)
                     /locus_tag="SB799_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868910.1"
                     /translation="TNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFA
                     SESANYSKANILAQSGSYAMAQANSVQQNVLRLLQ"
BASE COUNT          188 a          107 c          101 g          205 t
ORIGIN      
        1 ggcatcatta ccattgttta tagcttgacc taaagtggct gcttgtgaac gcaaagaatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctacttaaa gacttatcca gctctctagc attaacaact gaatttgcat gtgcgtttaa
      181 tgcaccgatg ttagtgttta tcctaaaacc cattttaaat cctttcaaaa tattgcatcg
      241 aaaagattaa agcaagaagt attccaagtt ttagtttaat taaaaattct agagtttaaa
      301 ataaaaaaag cctagtttta aaaactaggc ttggatttgt atatattgca gattttcaaa
      361 ctactgtagc aatcttaaaa cattttgttg aacagaatta gcctgtgcca tagcataaga
      421 accactttga gctaagatat ttgctttaga gtagtttgca ctctcacttg caaagtccac
      481 atcacgaatt tgtgattcag ctgctttaac gtttacttga gtaacagtaa tgttgtttat
      541 cgttgatgta acttgatttt gcactgaacc aatgtcagct ctgatttgat caagatttgt
      601 t
//
LOCUS       DARBAC010000183          590 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.184, whole genome shotgun sequence.
ACCESSION   DARBAC010000183 DARBAC010000000
VERSION     DARBAC010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.184"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>590)
                     /locus_tag="SB799_001693"
     CDS             complement(<1..>590)
                     /locus_tag="SB799_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868911.1"
                     /translation="KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDT
                     SDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFE
                     KDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELM
                     SHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDAL"
BASE COUNT          229 a           77 c           60 g          224 t
ORIGIN      
        1 agagcatcaa gaggatcatt accatgagaa acaatagaat ttttaaaatt ttctgctaat
       61 ttcttattta actccaaaac atcttcatga aatctttcat aataatgact catcagttct
      121 aaaaaataaa ttctagaaaa ttgaaagaaa ggtttaaaag aacaaagttc attataatct
      181 tgaatttcta gtttatttgt attcaaaact atcaatcttg cattttgcaa ttcatgtgaa
      241 aaatctaaga tatgaaacat tatccaaatg atttctatat ctttttcaaa aacaacaata
      301 tgttgatgat ttttattttg caataaagct ttaaataaaa ctccatttcc aaaaccataa
      361 aaatacaata caggataaag taggtatttg tcattatagg tgtttaacat agtgtttaat
      421 tcatcaataa cattttcata aagaaaagta ttatcacttg tatcttttaa attgatatct
      481 agattatctt tacctaagat aagttcaaat ttactagact tgatttcttt taaactttct
      541 tttaaaagaa tattacttaa agcctcaatg tttttgttaa agagttcttt
//
LOCUS       DARBAC010000184          580 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.185, whole genome shotgun sequence.
ACCESSION   DARBAC010000184 DARBAC010000000
VERSION     DARBAC010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.185"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>580
                     /locus_tag="SB799_001694"
     CDS             <1..>580
                     /locus_tag="SB799_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RecN"
                     /protein_id="HEG0868912.1"
                     /translation="TNFVSFLEDFKKDFNAYSQISNEFNVILEEEKKVEELKELARVQ
                     IEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKTEHIFELEKVVIEALNLSEVDP
                     SFFSECLNELRVICENQKMEDLDFDVETLLDRIENLSYLIKRYESIENALEVLKQKKH
                     ELEHYENLSFEKKELEKKFQELKQKLEEKAQIL"
BASE COUNT          256 a           48 c           94 g          182 t
ORIGIN      
        1 acaaattttg tttccttttt agaagatttt aaaaaagatt ttaatgctta tagtcaaatt
       61 tctaatgagt ttaatgtaat tttagaagaa gaaaaaaaag tagaagaatt aaaagaatta
      121 gctagagtac aaattgaaaa aatttcaagc attaatccta aaataggtga gtatgaagag
      181 cttttaatac ttaaaaaaaa gctttctaaa aaagataaat tagaagaagc ttggagtaag
      241 acagagcata tttttgagct tgaaaaagtt gttattgaag ctttaaattt aagcgaagtt
      301 gatccgagtt tttttagtga atgtttaaat gaattgcgtg tgatttgcga aaatcaaaaa
      361 atggaagatt tggattttga tgtggagaca cttttagatc gcattgaaaa tttatcctat
      421 ctcatcaagc gttatgaaag catagaaaat gctttagaag ttttaaaaca aaaaaaacat
      481 gaactagaac attatgaaaa tttaagtttt gaaaaaaaag aacttgaaaa aaaatttcaa
      541 gaattaaaac aaaaattaga agaaaaagca caaattttaa
//
LOCUS       DARBAC010000185          557 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.186, whole genome shotgun sequence.
ACCESSION   DARBAC010000185 DARBAC010000000
VERSION     DARBAC010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.186"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            11..199
                     /locus_tag="SB799_001695"
     CDS             11..199
                     /locus_tag="SB799_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011990032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868913.1"
                     /translation="MFLIIIFLFVVFIIVTRYEKKIKLLNQNIQNMKEDIADLKETTQ
                     KNRSLIEKNRSNIENIIK"
     gene            complement(202..>557)
                     /locus_tag="SB799_001696"
     CDS             complement(202..>557)
                     /locus_tag="SB799_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868914.1"
                     /translation="SKQEVVTIKKHEKLEIFKNLSQEDQEISFVKIEILNYDSNEDSL
                     SFNLDIFPSGMSYKYGILKGSMHIILQGKTSSTMLFPFLKSMIYKNKSENSSEKIFTL
                     MINQKKHYKLIANLS"
BASE COUNT          214 a           73 c           54 g          216 t
ORIGIN      
        1 tttagcattt atttttttga ttattatatt tttatttgta gtctttatca tcgttactcg
       61 ctatgaaaaa aagataaaat tactcaacca aaacatacaa aatatgaaag aagatatagc
      121 cgatcttaaa gaaacaactc aaaaaaatcg ctctttaatt gaaaaaaatc gctctaatat
      181 agaaaatata ataaaataaa actaagaaag atttgcgata agcttatagt gttttttctg
      241 atttatcatt aaagtaaaaa ttttttcact tgaattttcg cttttatttt tataaatcat
      301 actttttaaa aacggaaaaa gcatcgtact agaagtttta ccttgtaaaa taatatgcat
      361 agagcctttt aaaattccgt acttatagct cataccgctt ggaaatatat caagattaaa
      421 acttaaacta tcttcattac tatcataatt taaaatttca attttaacaa agctaatttc
      481 ttgatcttct tgagataaat ttttaaaaat ttcaagtttt tcatgttttt tgatagtaac
      541 aacttcttgc ttacttt
//
LOCUS       DARBAC010000186          557 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.187, whole genome shotgun sequence.
ACCESSION   DARBAC010000186 DARBAC010000000
VERSION     DARBAC010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.187"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>557)
                     /locus_tag="SB799_001697"
     CDS             complement(<1..>557)
                     /locus_tag="SB799_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEG0868915.1"
                     /translation="EKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKITLKNTQLA
                     SVISAISHELKNPLSVIDLSLEMLKDEKLEDKKLKKELLEKISRQSIKLNALTHKLNF
                     VFNLNSEALQMQEFDLFFLCEKITKNPGFERVVLQGKSTKVKADEFLIEQVIINLLSN
                     ALKYSQKEVILTARDQKIIVQDFGK"
BASE COUNT          171 a           86 c           63 g          237 t
ORIGIN      
        1 ttttccaaaa tcttgcacta ttatcttttg atctcttgct gttaaaatga cttctttttg
       61 actatatttt aaagcattag aaagcaaatt tataatcact tgctcgatta aaaattcatc
      121 agccttaact ttcgtgcttt taccttgcaa tacaactctt tcaaagcctg ggtttttagt
      181 gattttttca catagaaaaa aaagatcaaa ttcttgcatt tgcaaggctt cactattaag
      241 attaaaaaca aaattaagct tatgggttaa agcattaagt ttaatacttt gacgcgaaat
      301 tttttctagt aattcctttt ttaatttttt atcttccaat ttctcatctt ttagcatctc
      361 taagctaaga tcaatcacgc ttaatggatt tttaagctca tgagaaatag cagaaatcac
      421 actagcaagc tgagtatttt ttaaagtaat tttatcgctt tgttttttat ttttttgggt
      481 attctttaga attttatcct tagtttttaa aagtttctca tttagtaaat taaattcttt
      541 aaacattcct ttttcta
//
LOCUS       DARBAC010000187          535 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.188, whole genome shotgun sequence.
ACCESSION   DARBAC010000187 DARBAC010000000
VERSION     DARBAC010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.188"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>535)
                     /locus_tag="SB799_001698"
     CDS             complement(<1..>535)
                     /locus_tag="SB799_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEG0868916.1"
                     /translation="PRNPQLIELKNVLNKLLDVLQARVGSDMNAIHKIFEEYKSLDFR
                     NKLENASGSVELTTNALGDEIVKMLKQSSDFANALANESGKLQTAVQSLTTSSNSQAQ
                     SLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGIIGDIADQINLLALNAAIEA
                     ARAGEHGRGFAVVADEV"
BASE COUNT          165 a           97 c           78 g          195 t
ORIGIN      
        1 ctaacttcat cagccacaac tgcaaatcct ctaccatgtt ctccagcacg agctgcttca
       61 atagctgcat ttaaagctag aaggttgatt tgatctgcaa tatcacctat aatacctgta
      121 acatttttaa tctcttcaga ttgagtgata acatcactag ttttaactga aacattttgc
      181 atagaagaag tgatctcttc taaagctgct gcagtttctt ctaaagattg agcttgagaa
      241 tttgaagaag tggttaagct ttgaacagca gtttgtaatt ttccactttc attagctaaa
      301 gcattagcaa agtctgaact ttgttttagc attttaacta tttcatcacc taaagcatta
      361 gtagttaatt ctacactacc gctagcattt tctaatttat ttctaaagtc taagcttttg
      421 tattcttcaa aaattttatg aatagcattc atatcagaac ctactctagc ttgtaaaaca
      481 tcaagaagtt tatttagaac atttttaagt tcaatcagtt gtgggtttct tggat
//
LOCUS       DARBAC010000188          504 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.189, whole genome shotgun sequence.
ACCESSION   DARBAC010000188 DARBAC010000000
VERSION     DARBAC010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.189"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..451
                     /locus_tag="SB799_001699"
     CDS             <1..451
                     /locus_tag="SB799_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hemerythrin family protein"
                     /protein_id="HEG0868917.1"
                     /translation="ELFNYMKEHFDNEEQYMQEIHYPYLNEHKIMHKNIIRDMSYLIQ
                     NIKTTNDLKEKLYTIMSEWLLEHILHHDVMIGKWIKAHNKNTKEEETKQEKLTEDSQE
                     KLEFIYSCPCKTTHALSYNEHLDILYHNKNLKCKNCQQTLFYFKNPI"
BASE COUNT          229 a           74 c           55 g          146 t
ORIGIN      
        1 agaacttttt aactacatga aagaacattt tgacaatgaa gaacaataca tgcaagaaat
       61 tcattatcct tatttaaatg aacacaaaat catgcataaa aatatcattc gcgatatgtc
      121 ttatcttata caaaacataa aaactactaa tgatttaaaa gaaaaacttt atactataat
      181 gtcagagtgg cttttagaac acatattaca tcatgatgtt atgataggca aatggattaa
      241 agctcacaat aaaaacacta aagaagaaga aacaaaacaa gaaaaattaa cagaggattc
      301 tcaagaaaaa ttagaattta tatattcttg tccttgtaaa accactcatg ctttatcata
      361 caatgaacac ttagatattt tatatcacaa taaaaattta aagtgcaaaa attgccaaca
      421 aaccttattt tattttaaaa atccaatata aaggaataaa atgctaccaa aatgggataa
      481 aacctttagt gtccataatg ccaa
//
LOCUS       DARBAC010000189          503 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.190, whole genome shotgun sequence.
ACCESSION   DARBAC010000189 DARBAC010000000
VERSION     DARBAC010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.190"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            25..>503
                     /locus_tag="SB799_001700"
     CDS             25..>503
                     /locus_tag="SB799_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEG0868918.1"
                     /translation="MKKIILFILSLGIFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFF
                     VKKIAADTLDVNVILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQN
                     FPKLQVVNMQKNIALIQTHDTHEHSHEHEEHEHFDPHTWLDPILVQTMALNIYDALI"
BASE COUNT          197 a           77 c           64 g          165 t
ORIGIN      
        1 aaaatttata tcgaaggaaa tattttgaaa aaaattatat tatttatctt atctttaggg
       61 atattttata ctttcacaca agctaaaaat ttagagcaag aacaaaatac tagtagcaat
      121 ttagttagtg tcagcatagc acctcaagca ttttttgtta aaaaaatagc tgcagatact
      181 ctagatgtca atgttatctt acctccaaat agcaatgagc ataattttga atttaaacca
      241 agcactatga aaaaacttga aaaaagtgat atttatttca ccataggctt agaatttgaa
      301 aaagttttta cggataaatt taaacaaaat tttccaaaac ttcaagttgt aaatatgcaa
      361 aaaaacatag ctttgattca aactcatgat acacacgaac actctcatga acatgaggaa
      421 catgagcatt ttgatcctca tacttggcta gatcctattt tagtccaaac tatggcttta
      481 aatatttatg acgccttaat tca
//
LOCUS       DARBAC010000190          501 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.191, whole genome shotgun sequence.
ACCESSION   DARBAC010000190 DARBAC010000000
VERSION     DARBAC010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.191"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>501
                     /locus_tag="SB799_001701"
     CDS             <1..>501
                     /locus_tag="SB799_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEG0868919.1"
                     /translation="QRTGISKEDELFNNLTADFKLSKPFDYQIAFFKHNEIYHCFLAP
                     VYKLKKSRFCFPEPLIFQALFDERFIEESDYCVLNLYDQTLYLYFYQEGKFINLKKIE
                     NFNPSNMDLFFKQNRFIELLKHYESKLLLYQDLDTIKHYFSSQIKCLNLNDILDKNSL
                     LKLSSY"
BASE COUNT          191 a           62 c           60 g          188 t
ORIGIN      
        1 tcaaagaaca ggaatatcca aagaagatga actttttaac aatttaactg cagattttaa
       61 gctaagcaaa ccctttgact accaaatagc tttttttaaa cataatgaaa tttatcattg
      121 ttttttagcg cctgtttaca aattgaaaaa aagtcgtttt tgctttcctg agcctttaat
      181 ttttcaagct ttgtttgatg aaagatttat tgaggaaagt gattattgtg ttttaaattt
      241 atatgatcaa actttatatt tatattttta ccaagaggga aaatttatca atcttaaaaa
      301 aatcgaaaat ttcaacccaa gtaatatgga tttatttttt aaacaaaatc gatttataga
      361 acttttaaaa cactatgaaa gcaaattgct actttatcag gatttggata caatcaaaca
      421 ttacttctca tctcaaataa aatgtttaaa tctaaatgat attcttgata aaaatagttt
      481 attgaaatta agttcatata g
//
LOCUS       DARBAC010000191          400 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.194, whole genome shotgun sequence.
ACCESSION   DARBAC010000191 DARBAC010000000
VERSION     DARBAC010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.194"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>400
                     /locus_tag="SB799_001702"
     CDS             <1..>400
                     /locus_tag="SB799_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868920.1"
                     /translation="KAMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEEL
                     DNIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKATIGATQSSKIGLTRFETGGRIS
                     TSGEVQFTLKNYNGIDDFQFQKVVISTSVGT"
BASE COUNT          157 a           65 c           68 g          110 t
ORIGIN      
        1 ataaggctat ggatgagcaa cttaaaatct tagatacaat caaaactaag gcaactcaag
       61 cggctcaaga tggacaaagt ttaaaaacaa gaactatgct tcaagcagat atcaaccgtt
      121 taatggaaga acttgataat atcgcaaata ctacttcatt taacggtaaa caacttttaa
      181 gtgggaattt tatcaatcaa gaatttcaaa tcggcgcaag ttcaaatcaa actataaaag
      241 ctactatagg agcaacccag tcttctaaga taggtttaac acgctttgaa acaggaggaa
      301 gaatttcaac tagtggcgaa gtacaattta ctcttaaaaa ttacaatggt atagatgatt
      361 ttcagtttca aaaagttgtg atttcaactt cagttggaac
//
LOCUS       DARBAC010000192          398 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.195, whole genome shotgun sequence.
ACCESSION   DARBAC010000192 DARBAC010000000
VERSION     DARBAC010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.195"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            37..>398
                     /locus_tag="SB799_001703"
     CDS             37..>398
                     /locus_tag="SB799_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HEG0868921.1"
                     /translation="MTYNEKIISMNNDLLDHQHKELFEISKKLSLMNQRHVGTKELKI
                     VLRELLIMINRHFSDEEAFMREIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTE
                     KLNLVVQDFIFKHTAKKDS"
BASE COUNT          173 a           52 c           49 g          124 t
ORIGIN      
        1 ctctcgaaaa atataaatat aaaagtactc aaaaccatga cttataatga aaaaattatt
       61 tcgatgaata atgatctttt agatcatcaa cataaagaac tttttgaaat ttctaaaaaa
      121 ctctctttaa tgaaccaacg tcatgttgga acaaaagagt taaaaattgt cttaagagag
      181 ttgttgataa tgatcaatag acatttttca gatgaagaag cctttatgag agaaatagaa
      241 tatccttata tcaaccatca tacaagaatt catagaaaaa ttatcttaga aattgaagaa
      301 attatcatca gtgaagctaa atttgtaaat ataatgaccg aaaaattaaa tctcgttgtt
      361 caagatttta tctttaaaca tacagccaaa aaagattc
//
LOCUS       DARBAC010000193          381 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.196, whole genome shotgun sequence.
ACCESSION   DARBAC010000193 DARBAC010000000
VERSION     DARBAC010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.196"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>381
                     /locus_tag="SB799_001704"
     CDS             <1..>381
                     /locus_tag="SB799_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868922.1"
                     /translation="LESIPFQRILSERKNKFENAIVVSAGPSLAKQLPLLKAYQDKAV
                     IFCADGALSMLEKEGIVPDYVTNLDFTDLAMKFFQNKENKTSLNILSCATHPNLVHFL
                     DNKSVILRDDPLYQRFNLNDFGYI"
BASE COUNT          130 a           50 c           63 g          138 t
ORIGIN      
        1 tgcttgaaag cattcctttt caaagaatct taagtgaaag aaaaaacaaa ttcgaaaatg
       61 ctatagtagt ttctgcagga cctagtttag ctaaacaact tcctttactt aaagcttatc
      121 aagataaagc agtgatattt tgtgctgatg gggctttgag tatgcttgag aaagaaggca
      181 tagtgcctga ttatgttacg aatttagatt ttactgatct agcaatgaaa ttttttcaaa
      241 ataaagaaaa taaaacttct ttaaatatac tttcatgtgc tacgcatcct aatttggttc
      301 attttttaga taataaaagt gtgattttaa gagatgatcc tttatatcaa cgcttcaatc
      361 ttaatgattt tggttatatt g
//
LOCUS       DARBAC010000194          337 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.197, whole genome shotgun sequence.
ACCESSION   DARBAC010000194 DARBAC010000000
VERSION     DARBAC010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.197"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>337)
                     /locus_tag="SB799_001705"
     CDS             complement(<1..>337)
                     /locus_tag="SB799_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868923.1"
                     /translation="LYKILLQNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLII
                     LHHDDINLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNL
                     MRGNDPKDA"
BASE COUNT          124 a           41 c           46 g          126 t
ORIGIN      
        1 atggcatctt taggatcatt tccacgcata agattgtgat ttttgatgat ttgcatattg
       61 agtttattaa gttttaaaat atcttcttta tagtgttcat aaaaatcatt agcaatgtgt
      121 aggttataag aacgataaaa caaatcccct atcaaacgaa aaactttatc cattttagga
      181 agattaatat catcatgatg taaaataatg agtcgcccta agcttaaatc tttgctaaaa
      241 tctatgaaat ttaaagccaa aaagataagt tctaattctt tttcaaagat gattattctt
      301 ttaagtgctt gattttgaag tagaatttta tataaaa
//
LOCUS       DARBAC010000195          334 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.198, whole genome shotgun sequence.
ACCESSION   DARBAC010000195 DARBAC010000000
VERSION     DARBAC010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.198"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..213)
                     /locus_tag="SB799_001706"
     CDS             complement(<1..213)
                     /locus_tag="SB799_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868924.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDA"
BASE COUNT          113 a           62 c           45 g          114 t
ORIGIN      
        1 agcatcgtta ccattagata tagcttgacc taaagtatta gcttgagatc ttaaactatc
       61 tgctatcgcc atccctgaag catcatctgc tgcggagttg attctaagac ctgaactaag
      121 tctgcttaaa gaagcatcta aacttttact atttaaatca gcgtttgctt tagcatttaa
      181 agctgcaaca ttggtgttaa tacgaaatcc cattttaaat ccttttaaaa aaattcaagc
      241 tcatccatga acttgttaaa tgctatatcg tgcaatcaaa aaaatatttt atactttagc
      301 aataaaattt catacttttg acaaagactt gtat
//
LOCUS       DARBAC010000196          333 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.199, whole genome shotgun sequence.
ACCESSION   DARBAC010000196 DARBAC010000000
VERSION     DARBAC010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.199"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>333)
                     /locus_tag="SB799_001707"
     CDS             complement(<1..>333)
                     /locus_tag="SB799_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868925.1"
                     /translation="MGFGSVNKGVMLGGFSSVTAYMSSAGSGFSAGSGYSVGSGKNYS
                     TSISGIAVAFSSGSGLSAVYNVSAGSGFSSQSGLSQFATMKTSAGNSLGVKDETAGVT
                     TLKGAMAV"
BASE COUNT          108 a           85 c           55 g           85 t
ORIGIN      
        1 tcacagccat agcgccttta agtgtggtta cacctgcggt ttcatctttt acgccaagag
       61 aatttcctgc tgaagttttc atggttgcaa actgagaaag tccgctttga ctagaaaaac
      121 ctgagcctgc agacacattg tatactgcag aaagacccga tccacttgaa aaggctactg
      181 caattccaga tatacttgta gaataattct taccgctacc tacagaataa cctgaacctg
      241 ccgaaaatcc acttcctgca ctactcatat aagcagtaac agaagaaaag ccacctagca
      301 taactccttt atttacagaa ccaaatccca tag
//
LOCUS       DARBAC010000197          303 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.201, whole genome shotgun sequence.
ACCESSION   DARBAC010000197 DARBAC010000000
VERSION     DARBAC010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.201"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>303
                     /locus_tag="SB799_001708"
     CDS             <1..>303
                     /locus_tag="SB799_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868926.1"
                     /translation="FEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKI
                     QSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYV"
BASE COUNT          132 a           25 c           39 g          107 t
ORIGIN      
        1 ttttgaaaaa ttagaacctt taagtttaaa taaacaaaat gaatttttac ttaaggctta
       61 ttataaagtt tatcaaagta ttaaacattg tagagatttt agtaaaatac tcagcaatga
      121 ttttgaaaaa atacaaagta tatatttgag tttaaatgaa aaagaagaat atttaaattt
      181 agctattgaa aaaatagatg ggtttaaaaa taaacttgaa gatataaaac aaatgcaaga
      241 tttgtatgaa attttaggtc ccctactaac tcaatttgaa cttaatcttg ctagaattta
      301 tgt
//
LOCUS       DARBAC010000198          298 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.202, whole genome shotgun sequence.
ACCESSION   DARBAC010000198 DARBAC010000000
VERSION     DARBAC010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.202"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
BASE COUNT           89 a           34 c           34 g          141 t
ORIGIN      
        1 ttattactta attgtataat ttttactaag attacttatt tttagtgctt taatattatt
       61 ctttattgat ataataaatt ttgagttaat tatattttac ttattgtttt ttagaaaaga
      121 taaaacttca attataaaaa aaagtttgtt ttgagctcag attaatactt ctgagcccat
      181 tttgatctcg ttgagtttta aggtataagc tttttatagc tttattttcc ctcccatttt
      241 tactctcatt tagtaaagtg cttatagatt taaaggttga ttgactcctt atcttgca
//
LOCUS       DARBAC010000199          293 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.203, whole genome shotgun sequence.
ACCESSION   DARBAC010000199 DARBAC010000000
VERSION     DARBAC010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.203"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>293)
                     /locus_tag="SB799_001709"
     CDS             complement(<1..>293)
                     /locus_tag="SB799_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868927.1"
                     /translation="AGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTP
                     SVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHIL"
BASE COUNT          109 a           41 c           42 g          101 t
ORIGIN      
        1 taaaatatgt tcatacattt gactttcata attagctgaa ttttgataat catcaggatg
       61 agaattgcca ttttcagcat aagctaaatc ctgtcctata aaaatgatgt ttttatgatt
      121 gagtagaacc gaaagaaaat atgacatatg tgcaacgcta ggtgtattgt ataaaaaatc
      181 aaaatattta agctttatat agattggaaa atataaatat cttggtatga taagatattt
      241 tctatttcta ccctttaaat actcaatcgc ctttggatga acaacaccag cac
//
LOCUS       DARBAC010000200          275 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.204, whole genome shotgun sequence.
ACCESSION   DARBAC010000200 DARBAC010000000
VERSION     DARBAC010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.204"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>275
                     /locus_tag="SB799_001710"
     CDS             <1..>275
                     /locus_tag="SB799_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868928.1"
                     /translation="KSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDYKNLDK
                     HEGHFQRDKGKFQCLAYGGNGKVESSRIWTMFRLIFENDINYFQKLF"
BASE COUNT          111 a           29 c           43 g           92 t
ORIGIN      
        1 aaaagtgtag caaatatgag ctacctactt acagaatatt taaactataa aaacattatt
       61 ctcataggac aggatttagc ttatgcaaaa gatggatttt cccatactaa agattataaa
      121 aatcttgata aacatgaagg acattttcaa agagataagg gtaaatttca atgtttagct
      181 tatggaggta acggaaaagt tgaaagttct agaatttgga ctatgtttcg actaattttt
      241 gaaaatgata ttaattattt tcaaaaatta tttaa
//
LOCUS       DARBAC010000201          264 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.205, whole genome shotgun sequence.
ACCESSION   DARBAC010000201 DARBAC010000000
VERSION     DARBAC010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.205"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>264
                     /locus_tag="SB799_001711"
     CDS             <1..>264
                     /locus_tag="SB799_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEG0868929.1"
                     /translation="SAINSVKDTTGVEASIDANGQLLLTSREGRGIKIDGNIGGGAFI
                     NASMKENYGRLSLVKNDGKDILISGTNLSSAGFGATQFISQASV"
BASE COUNT           78 a           42 c           57 g           87 t
ORIGIN      
        1 tctgcaatta actcggttaa agatactact ggagttgaag cttcaatcga tgctaatgga
       61 cagcttttac ttacttcaag agaaggtaga gggattaaaa tcgatggtaa tataggtgga
      121 ggtgctttta tcaatgctag catgaaagaa aactatggcc gcttgtcttt agttaaaaac
      181 gatggtaaag atattttaat cagtggtacc aatctttctt ctgcaggctt tggtgcaact
      241 caatttatct ctcaggcttc tgtt
//
LOCUS       DARBAC010000202          251 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.206, whole genome shotgun sequence.
ACCESSION   DARBAC010000202 DARBAC010000000
VERSION     DARBAC010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.206"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            complement(<1..>251)
                     /locus_tag="SB799_001712"
     CDS             complement(<1..>251)
                     /locus_tag="SB799_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868930.1"
                     /translation="KVYKVVLFDCVAKDLEIQIAMIFDQQSILEYLSLYEMFISSHYY
                     LKYYETSILSLNELCIKSASVAIRNADITCFLPLLTHGQ"
BASE COUNT          102 a           39 c           25 g           85 t
ORIGIN      
        1 ctgtccatgt gttagcaaag gtaaaaaaca agtaatatct gcatttctta ttgctacact
       61 tgcactttta atacaaagtt catttaaaga taaaatagaa gtttcatagt atttaagata
      121 ataatgcgag ctaataaaca tttcatataa acttaaatac tctaaaatac tttgctgatc
      181 aaaaatcata gcaatttgaa tttctaaatc ctttgcaaca cagtcaaata atacaacctt
      241 ataaactttt a
//
LOCUS       DARBAC010000203          251 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.denovo.207, whole genome shotgun sequence.
ACCESSION   DARBAC010000203 DARBAC010000000
VERSION     DARBAC010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.denovo.207"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            <1..>251
                     /locus_tag="SB799_001713"
     CDS             <1..>251
                     /locus_tag="SB799_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HEG0868931.1"
                     /translation="CSGKIYLVDIEEERVDIQLLILFDMKDISEYLSLYEMFVNNVYY
                     KKFYEDIWHKADELCEKNIKVVIRNLGSNSDLSFECYSH"
BASE COUNT           86 a           18 c           48 g           99 t
ORIGIN      
        1 tttgtagtgg aaaaatttat cttgtggata tcgaagaaga aagagtggat attcaactgc
       61 ttatactttt tgatatgaaa gatatatctg agtacttaag tttatatgaa atgtttgtaa
      121 ataatgttta ttataaaaag ttttatgagg atatttggca taaagcagac gagctttgtg
      181 agaaaaatat taaagttgtg ataagaaatt taggttctaa ttctgatctt tcttttgagt
      241 gttattctca t
//
LOCUS       DARBAC010000204         1102 bp    DNA     linear   BCT 06-NOV-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 133
            SAMN14118057-rid18150243.guided.165, whole genome shotgun sequence.
ACCESSION   DARBAC010000204 DARBAC010000000
VERSION     DARBAC010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN14118057
            Sequence Read Archive: SRR11101804
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-MAY-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001750862.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001750862.1
            Genome Coverage       :: 185x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 05/22/2023 23:40:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,714
            CDSs (total)                      :: 1,677
            Genes (coding)                    :: 1,648
            CDSs (with protein)               :: 1,648
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 23 of 29
            Pseudo Genes (incomplete)         :: 3 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN14118057-rid18150243.guided.165"
                     /isolate="133"
                     /isolation_source="cattle"
                     /db_xref="taxon:197"
                     /country="Sweden"
                     /collected_by="National Veterinary Institute"
                     /note="genotype: 1326"
     gene            65..811
                     /locus_tag="SB799_001714"
     CDS             65..811
                     /locus_tag="SB799_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class D beta-lactamase OXA-184"
                     /protein_id="HEG0868932.1"
                     /translation="MKKILLLFSLFYSFALANDKLKDFFKDYNTSGVFITFDGKHYAS
                     NNFKRAKEPFSPASTFKIFNALIALDNGVVKDTKEIFYHYKGEKVFLPSWKQDASLSS
                     AIKRSQVPAFKELARKIGLKTMQESLNKLSYGNTKISKIDTFWLDNSLQISAKNQADL
                     LFKLSQNSLPFSKKSQEEVKKIILFKEDKIQKIYAKTGFNDGINLAWIVGFIESKNKI
                     LSFALNVDIKNIKNLKIREELLEKYIYSLN"
BASE COUNT          426 a          116 c          145 g          415 t
ORIGIN      
        1 aagaaaacat tgttataata gaccaataag aattaaaaaa tttcttcatg aaaaaggaaa
       61 taaattgaaa aaaatacttt tactttttag tcttttttac tcttttgctt tggcaaatga
      121 taaattaaaa gattttttta aagactacaa tacaagcgga gtttttataa cttttgatgg
      181 aaaacattat gcaagtaata attttaaaag agctaaagaa cctttttctc ctgcttcgac
      241 ttttaaaatt tttaatgctt taattgcgct tgataatggt gtagttaaag atacaaagga
      301 aattttttat cattataagg gtgaaaaagt atttttgccc tcttggaaac aagatgctag
      361 tttaagctca gccataaaac gctctcaagt gcctgctttt aaagaattgg caagaaaaat
      421 aggacttaaa accatgcaag aaagcttaaa taaactttcc tatggaaata caaaaatttc
      481 aaaaatcgat accttttggc tggataattc tttacaaatt tctgcaaaaa atcaagctga
      541 tttgcttttt aaactttcac aaaattcttt acctttttcc aagaaaagtc aagaagaagt
      601 taaaaaaatt attcttttta aagaagataa aatccaaaaa atttatgcta aaacaggttt
      661 taatgatggt ataaatttgg cttggattgt tggatttata gagagtaaaa acaaaatttt
      721 atcttttgcc ttaaatgttg atataaagaa cattaaaaat cttaaaataa gagaagaatt
      781 gctagaaaaa tatatttatt ctttaaacta attaagcttt tataagaaat tgtttaatga
      841 tcaaaatatc gcaatataat agtttttaag aaaaatagat ataaaatact gattatatta
      901 aatttattta agagaaatgt tagatgtcta tggtaactta tgctttttta gcacttgcct
      961 tggttttgtt gtcttttaat aaaattaaaa cagcttattt attttttata attagtgtat
     1021 tttttgctta ttattttaag ataattaata tcacttttat agtaattaat attattgcat
     1081 ttgggttggc tttatattat ag
//
